HHsearch alignment for GI: 254780684 and conserved domain: PRK06315
>PRK06315 type III secretion system ATPase; Provisional.
Probab=100.00 E-value=0 Score=988.77 Aligned_cols=432 Identities=37% Similarity=0.615 Sum_probs=404.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCEEEEECC-CCCEEEEEEEECCCEEEEEECCCCC
Q ss_conf 923699999999741334212012899995258999826888873518999569-9607999997419979999804855
Q gi|254780684|r 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGK-NSDNLGQVIRINLDIVYICPVGIGE 79 (438)
Q Consensus 1 m~~~l~~l~~~~~~~~~~l~~~~G~V~~V~G~ii~v~Gl~~~v~iGelv~i~~~-~~~v~geVi~~~~~~~~l~~~~~~~ 79 (438)
T Consensus 4 ~~~~~~~~~~~~~~~~~--~~~~GrV~~v~G~~ie~~g~--~~~iGelc~I~~~~~~~~~aEVVgf~~~~~~l~p~~~~~ 79 (442)
T PRK06315 4 LTTDFDTLMSQLPDVQL--TTVVGRITEVVGMLIKAVVP--DVRVGEVCLVKRHGMEPLVTEVVGFTQNFVFLSPLGELT 79 (442)
T ss_pred HHHHHHHHHHHHCCCCC--CEEEEEEEEEEEEEEEEEEC--CCCCCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCC
T ss_conf 56649999998613886--21357999999789999867--898678689991899778899999849979999877876
Q ss_pred CCCCCCEEEECCC-CEEECCHHHHHHHHHHHHHHCCC--CCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 7467888997288-55524666886543077630478--87775553012112543330001331100111245875200
Q gi|254780684|r 80 EISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG--DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 (438)
Q Consensus 80 gI~~G~~V~~~g~-~~i~vG~~lLGRViD~lG~PlDg--~~~l~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIr~ID~l~ 156 (438)
T Consensus 80 Gi~~G~~V~~~g~~~~vpvg~~lLGRViD~~G~PiDg~~~gp~~~~~~~~pi~~~~p~p~~R~~i~epl~TGIraID~ll 159 (442)
T PRK06315 80 GVSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDTETKGPLENVDETYPIFRAPPDPLHRAKLRTILSTGVRCIDGML 159 (442)
T ss_pred CCCCCCEEEECCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCCEEECCCC
T ss_conf 78999999968998778727151378888887766787778876776311324789693430787875336853001127
Q ss_pred HHCCCCEEEEECCCCCCHHHHHHHHHHHCC-CCCEEEEECCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCCCHHHHHHH
Q ss_conf 223585037526678899999999874078-9838993124652238899998642-77553289841577880344444
Q gi|254780684|r 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDC-FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234 (438)
Q Consensus 157 pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~-~dv~V~alIGeR~rev~efi~~~~~-~~l~~tvvv~~t~d~~~~~r~~a 234 (438)
T Consensus 160 pig~GQR~gIfagsGvGKs~Ll~~i~~~~~~adv~V~~lIGeRgrEv~efie~~~~~~~l~rsvvV~atsd~p~~~R~~a 239 (442)
T PRK06315 160 TVARGQRIGIFAGAGVGKSSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNA 239 (442)
T ss_pred CCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
T ss_conf 70237776403899998889999999744038934999955113799999997520145213399961799987887555
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEE
Q ss_conf 45677788886426798899970989999998766540477843236632455420044444311367885235543334
Q gi|254780684|r 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 (438)
Q Consensus 235 ~~~a~~iAEyfr~~G~~Vll~~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l~ERag~~~~~~GSiT~~~~v~ 314 (438)
T Consensus 240 ~~~A~aiAEyFrd~G~~VLl~~DslTR~A~A~REi~l~~gepP~~~GYppsvf~~l~~l~ERag~--~~~GSITa~~tVl 317 (442)
T PRK06315 240 AYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERAGA--SDKGTITAFYTVL 317 (442)
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC--CCCCCEEEEEEEE
T ss_conf 88777899999868994899943702888899999975589998778683399887888872248--8997456533465
Q ss_pred ECCCCCCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 21676420278999861260898704277589713114456400022120899999999999999999999999998523
Q gi|254780684|r 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 (438)
Q Consensus 315 ~~~dd~~~pi~~~~~~i~DG~i~L~r~la~~g~~Paid~~~S~SR~~~~~~~~~~~~~~~~~~~~l~~y~~~~~l~~~g~ 394 (438)
T Consensus 318 ~~gdD~~dPi~d~~~~ilDGhivLsr~la~~g~yPAIDvl~S~SR~~~~v~~~~h~~~a~~~r~~la~y~e~edli~iG~ 397 (442)
T PRK06315 318 VAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGE 397 (442)
T ss_pred CCCCCCCCCCHHHHHHHCCCEEEECHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 15887678736777876061699858798669999718750453366110579999999999999998899999999629
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHCC
Q ss_conf 4469998999999999999998359988899976-8999998709
Q gi|254780684|r 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED-VFQEITKKLQ 438 (438)
Q Consensus 395 y~~g~d~~~d~~i~~~~~i~~fl~Q~~~e~~~~~-~~~~~~~~l~ 438 (438)
T Consensus 398 y~~g~d~~~d~ai~~~~~i~~fL~Q~~~e~~~~~~~~~~l~~i~~ 442 (442)
T PRK06315 398 YRRGSDREVDFAIDHIDKLNRFLKQDIHEKTNYEEAAQQLRAIFR 442 (442)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 878999889999997999999828998899699999999999759