HHsearch alignment for GI: 254780684 and conserved domain: PRK06820
>PRK06820 type III secretion system ATPase; Validated.
Probab=100.00 E-value=0 Score=970.72 Aligned_cols=428 Identities=39% Similarity=0.604 Sum_probs=397.9
Q ss_pred HHHHHHHHHHHHHCC--CCEEEEEEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCC
Q ss_conf 369999999974133--421201289999525899982688887351899956996079999974199799998048557
Q gi|254780684|r 3 KNLETLAQLAEDYSK--NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80 (438)
Q Consensus 3 ~~l~~l~~~~~~~~~--~l~~~~G~V~~V~G~ii~v~Gl~~~v~iGelv~i~~~~~~v~geVi~~~~~~~~l~~~~~~~g 80 (438)
T Consensus 8 ~~~~~~~~~~~~~~~p~~~vr~~G~V~~V~g~iv~~~l~--~~~~Gelc~i~~~--g~~aeVv~~~~~~v~l~~~~~~~G 83 (445)
T PRK06820 8 RLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLP--NVAQGELCRIEPQ--GMLAEVVSIEQEMALLSPFASSDG 83 (445)
T ss_pred HHHHHHHHHHHCCCCCCCCCEEEEEEEEEECEEEEEECC--CCCCCCEEEEECC--CEEEEEEEEECCEEEEEECCCCCC
T ss_conf 899999987416799999846676999992769999658--8784898999279--989999998789799998878878
Q ss_pred CCCCCEEEECCC-CEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 467888997288-5552466688654307763047887775553012112543330001331100111245875200223
Q gi|254780684|r 81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 (438)
Q Consensus 81 I~~G~~V~~~g~-~~i~vG~~lLGRViD~lG~PlDg~~~l~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIr~ID~l~pig 159 (438)
T Consensus 84 i~~G~~V~~tG~~l~V~VG~~lLGRVvD~lG~PiDgg~~~~-~-~~~pi~~~~p~p~~R~~i~~pL~TGIraID~l~pig 161 (445)
T PRK06820 84 LRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPLT-G-QWRELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCG 161 (445)
T ss_pred CCCCCEEEECCCCEEEECCCCCCCCEECCCCCCCCCCCCCC-C-CEEECCCCCCCCHHCCCCCCCCCCCCEEEECCCCCC
T ss_conf 89999999799960887282402787068875318998877-7-432035899683202687851126854662567744
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf 5850375266788999999998740789838993124652238899998642-775532898415778803444444567
Q gi|254780684|r 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 (438)
Q Consensus 160 ~GQR~gIfg~~GvGKt~Ll~~i~~~~~~dv~V~alIGeR~rev~efi~~~~~-~~l~~tvvv~~t~d~~~~~r~~a~~~a 238 (438)
T Consensus 162 rGQR~gIfgg~GvGKT~Ll~~i~~~~~adv~V~~~IGeRgrEv~efie~~~~~~~~~rtvvV~atsd~p~~~R~~a~~~a 241 (445)
T PRK06820 162 EGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTA 241 (445)
T ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 78742110689998122344565306788799998744128999999986423761106999416768989999998761
Q ss_pred HHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCC
Q ss_conf 77888864267988999709899999987665404778432366324554200444443113678852355433342167
Q gi|254780684|r 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 (438)
Q Consensus 239 ~~iAEyfr~~G~~Vll~~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l~ERag~~~~~~GSiT~~~~v~~~~d 318 (438)
T Consensus 242 ~aiAEyfrd~Gk~VLli~DslTr~A~A~REisl~~gepP~~~gYp~~vf~~l~~L~ERag~~--~~GSITal~~V~~~~d 319 (445)
T PRK06820 242 TTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNS--DRGSITAFYTVLVEGD 319 (445)
T ss_pred HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC--CCCCEEEEEEEEECCC
T ss_conf 14889998679848998446578888998999864799976777854998888888730478--8975677888970588
Q ss_pred CCCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 64202789998612608987042775897131144564000221208999999999999999999999999985234469
Q gi|254780684|r 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 (438)
Q Consensus 319 d~~~pi~~~~~~i~DG~i~L~r~la~~g~~Paid~~~S~SR~~~~~~~~~~~~~~~~~~~~l~~y~~~~~l~~~g~y~~g 398 (438)
T Consensus 320 D~tdpi~d~~~silDG~ivLsr~La~~g~yPAIDvl~SvSRv~~~~~~~~h~~~a~~~r~~la~y~e~e~li~~G~y~~g 399 (445)
T PRK06820 320 DMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAG 399 (445)
T ss_pred CCCCCCHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 76777167675651538998487986699998187405645462220299999999999999999999999984787679
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHCC
Q ss_conf 9989999999999999983599888999--768999998709
Q gi|254780684|r 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS--EDVFQEITKKLQ 438 (438)
Q Consensus 399 ~d~~~d~~i~~~~~i~~fl~Q~~~e~~~--~~~~~~~~~~l~ 438 (438)
T Consensus 400 ~d~~~d~ai~~~~~i~~fL~Q~~~~~~~~~~~~~~~~~~~l~ 441 (445)
T PRK06820 400 EDLQADEALQRYPAICAFLQQDHSLTRDPDTAHLDTTLEHLA 441 (445)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 998999999878999998589998888877779899999999