HHsearch alignment for GI: 254780684 and conserved domain: PRK06820

>PRK06820 type III secretion system ATPase; Validated.
Probab=100.00  E-value=0  Score=970.72  Aligned_cols=428  Identities=39%  Similarity=0.604  Sum_probs=397.9

Q ss_pred             HHHHHHHHHHHHHCC--CCEEEEEEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCC
Q ss_conf             369999999974133--421201289999525899982688887351899956996079999974199799998048557
Q gi|254780684|r    3 KNLETLAQLAEDYSK--NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEE   80 (438)
Q Consensus         3 ~~l~~l~~~~~~~~~--~l~~~~G~V~~V~G~ii~v~Gl~~~v~iGelv~i~~~~~~v~geVi~~~~~~~~l~~~~~~~g   80 (438)
T Consensus         8 ~~~~~~~~~~~~~~~p~~~vr~~G~V~~V~g~iv~~~l~--~~~~Gelc~i~~~--g~~aeVv~~~~~~v~l~~~~~~~G   83 (445)
T PRK06820          8 RLTPRLQQQLTRPSAPPEGLRYRGPIVEIGPTLLRASLP--NVAQGELCRIEPQ--GMLAEVVSIEQEMALLSPFASSDG   83 (445)
T ss_pred             HHHHHHHHHHHCCCCCCCCCEEEEEEEEEECEEEEEECC--CCCCCCEEEEECC--CEEEEEEEEECCEEEEEECCCCCC
T ss_conf             899999987416799999846676999992769999658--8784898999279--989999998789799998878878


Q ss_pred             CCCCCEEEECCC-CEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             467888997288-5552466688654307763047887775553012112543330001331100111245875200223
Q gi|254780684|r   81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC  159 (438)
Q Consensus        81 I~~G~~V~~~g~-~~i~vG~~lLGRViD~lG~PlDg~~~l~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIr~ID~l~pig  159 (438)
T Consensus        84 i~~G~~V~~tG~~l~V~VG~~lLGRVvD~lG~PiDgg~~~~-~-~~~pi~~~~p~p~~R~~i~~pL~TGIraID~l~pig  161 (445)
T PRK06820         84 LRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGPPLT-G-QWRELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCG  161 (445)
T ss_pred             CCCCCEEEECCCCEEEECCCCCCCCEECCCCCCCCCCCCCC-C-CEEECCCCCCCCHHCCCCCCCCCCCCEEEECCCCCC
T ss_conf             89999999799960887282402787068875318998877-7-432035899683202687851126854662567744


Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCCCHHHHHHHHHHH
Q ss_conf             5850375266788999999998740789838993124652238899998642-775532898415778803444444567
Q gi|254780684|r  160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA  238 (438)
Q Consensus       160 ~GQR~gIfg~~GvGKt~Ll~~i~~~~~~dv~V~alIGeR~rev~efi~~~~~-~~l~~tvvv~~t~d~~~~~r~~a~~~a  238 (438)
T Consensus       162 rGQR~gIfgg~GvGKT~Ll~~i~~~~~adv~V~~~IGeRgrEv~efie~~~~~~~~~rtvvV~atsd~p~~~R~~a~~~a  241 (445)
T PRK06820        162 EGQRIGIFAAAGVGKSTLLSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLSTA  241 (445)
T ss_pred             CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf             78742110689998122344565306788799998744128999999986423761106999416768989999998761


Q ss_pred             HHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCC
Q ss_conf             77888864267988999709899999987665404778432366324554200444443113678852355433342167
Q gi|254780684|r  239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD  318 (438)
Q Consensus       239 ~~iAEyfr~~G~~Vll~~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l~ERag~~~~~~GSiT~~~~v~~~~d  318 (438)
T Consensus       242 ~aiAEyfrd~Gk~VLli~DslTr~A~A~REisl~~gepP~~~gYp~~vf~~l~~L~ERag~~--~~GSITal~~V~~~~d  319 (445)
T PRK06820        242 TTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLERTGNS--DRGSITAFYTVLVEGD  319 (445)
T ss_pred             HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC--CCCCEEEEEEEEECCC
T ss_conf             14889998679848998446578888998999864799976777854998888888730478--8975677888970588


Q ss_pred             CCCCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             64202789998612608987042775897131144564000221208999999999999999999999999985234469
Q gi|254780684|r  319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG  398 (438)
Q Consensus       319 d~~~pi~~~~~~i~DG~i~L~r~la~~g~~Paid~~~S~SR~~~~~~~~~~~~~~~~~~~~l~~y~~~~~l~~~g~y~~g  398 (438)
T Consensus       320 D~tdpi~d~~~silDG~ivLsr~La~~g~yPAIDvl~SvSRv~~~~~~~~h~~~a~~~r~~la~y~e~e~li~~G~y~~g  399 (445)
T PRK06820        320 DMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAASVSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAG  399 (445)
T ss_pred             CCCCCCHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             76777167675651538998487986699998187405645462220299999999999999999999999984787679


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHCC
Q ss_conf             9989999999999999983599888999--768999998709
Q gi|254780684|r  399 VDLILDKAVHQVPIIYDFLKQSPSDLSS--EDVFQEITKKLQ  438 (438)
Q Consensus       399 ~d~~~d~~i~~~~~i~~fl~Q~~~e~~~--~~~~~~~~~~l~  438 (438)
T Consensus       400 ~d~~~d~ai~~~~~i~~fL~Q~~~~~~~~~~~~~~~~~~~l~  441 (445)
T PRK06820        400 EDLQADEALQRYPAICAFLQQDHSLTRDPDTAHLDTTLEHLA  441 (445)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             998999999878999998589998888877779899999999