HHsearch alignment for GI: 254780684 and conserved domain: PRK07165

>PRK07165 F0F1 ATP synthase subunit alpha; Validated.
Probab=100.00  E-value=0  Score=798.59  Aligned_cols=397  Identities=22%  Similarity=0.273  Sum_probs=369.0

Q ss_pred             EEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCC-CEEECCHHHH
Q ss_conf             289999525899982688887351899956996079999974199799998048557467888997288-5552466688
Q gi|254780684|r   24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWC  102 (438)
Q Consensus        24 G~V~~V~G~ii~v~Gl~~~v~iGelv~i~~~~~~v~geVi~~~~~~~~l~~~~~~~gI~~G~~V~~~g~-~~i~vG~~lL  102 (438)
T Consensus         3 pkV~sV~DgIa~V~GL~-n~~~~El~~f~~~-~~v~g~~lnleed~vg~vi~g~~~~i~eGd~V~~Tg~i~~VpVG~~lL   80 (507)
T PRK07165          3 PKIKSIFDYIVEVKGEF-DYQQQQVFTLKNN-PNVKLFVISATEDTAYLLINNEKAKIKIGDEIIELNNENKVLTSKEYF   80 (507)
T ss_pred             CEEEEEECEEEEEECCH-HHCCCCEEEECCC-CCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCC
T ss_conf             70899814489996770-2244866996489-962899972553617999987987704899998459857887576644


Q ss_pred             HHHHHHHHHHCCCCCCCCCC----CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH-
Q ss_conf             65430776304788777555----3012112543330001331100111245875200223585037526678899999-
Q gi|254780684|r  103 GRVINALGKPIDGDDSLGKG----DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-  177 (438)
Q Consensus       103 GRViD~lG~PlDg~~~l~~~----~~~~~i~~~~p~p~~R~~i~e~L~TGIr~ID~l~pig~GQR~gIfg~~GvGKt~L-  177 (438)
T Consensus        81 GRVVD~LG~pidp~~~~~~~~~~~~~~~pie~~Apgi~~R~~V~ePLqTGIkaID~miPIGRGQRELIiGDrqTGKTaIA  160 (507)
T PRK07165         81 GKIIDIDGNIIYPKAANPLKSEKAYQTSSAFNLAHGLMTVQTLNEQLYTGIVAIDLLIPIGKGQRELIIGDRQTGKTHIA  160 (507)
T ss_pred             CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH
T ss_conf             63688999867898988877654333477455799852367678613434678761355567616777357887788999


Q ss_pred             HHHHH-HHCCCCCEEEEECCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             99987-40789838993124652238899998642-77553289841577880344444456777888864267988999
Q gi|254780684|r  178 LSMFA-RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI  255 (438)
Q Consensus       178 l~~i~-~~~~~dv~V~alIGeR~rev~efi~~~~~-~~l~~tvvv~~t~d~~~~~r~~a~~~a~~iAEyfr~~G~~Vll~  255 (438)
T Consensus       161 ldtIiNQk~~~V~cIYVAIGQK~s~Va~iv~~L~~~gAm~yTiVV~A~sd~-p~~qylAPy~g~aiAEyf~-~~~dvLii  238 (507)
T PRK07165        161 LNTIINQKNRNVKCIYVAIGQKRENLSRIYETLKEHDALKNTIIIDAPSTS-SYEQYLAPYVAMAHAENIS-YNDDVLIV  238 (507)
T ss_pred             HHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHEEEEECCCCC-CHHHHHHHHHHHHHHHHHH-CCCCEEEE
T ss_conf             999984546895899998310177999999999877975652576315778-2777778888887889886-46856999


Q ss_pred             EECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCE
Q ss_conf             70989999998766540477843236632455420044444311367885235543334216764202789998612608
Q gi|254780684|r  256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH  335 (438)
Q Consensus       256 ~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l~ERag~~~~~~GSiT~~~~v~~~~dd~~~pi~~~~~~i~DG~  335 (438)
T Consensus       239 yDDLTkhA~AyReisLll~rPPGReayPgdvFy~hsrLLERa~kl~-g~gSiTaLPIieT~~gDisayIpTNviSITDGQ  317 (507)
T PRK07165        239 FDDLTKHANIYREIALLTNKPVGKEAFPGDIFFAHSKLLERAGKFK-NRKSITALPILQTVDNDITSLISSNIISITDGQ  317 (507)
T ss_pred             ECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCEEEEEEEEEECCCCCCCCCCCCEEEECCCE
T ss_conf             6476899999998898727999977899605766168888876126-996157601787027862243566447741762


Q ss_pred             EEEEHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             98704277589713114456400022120899999999999999999999999998523446999899999999999999
Q gi|254780684|r  336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD  415 (438)
Q Consensus       336 i~L~r~la~~g~~Paid~~~S~SR~~~~~~~~~~~~~~~~~~~~l~~y~~~~~l~~~g~y~~g~d~~~d~~i~~~~~i~~  415 (438)
T Consensus       318 I~l~~~Lf~~G~rPAInvglSVSRvG~~aQ~k~~k~vag~l~l~~aqy~el~~fa~f~s---dld~~t~~~l~rG~r~~e  394 (507)
T PRK07165        318 IVTSSELFAQGKLPAIDIDLSVSRTGSSVQSKNIAKIAKEISKIYRAYKRQLKLSSLDY---DLNKETSDLLSKGKMIEK  394 (507)
T ss_pred             EEECHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHHH
T ss_conf             88517677469886523570065157688899999986365678999999999986545---418999999973289999


Q ss_pred             HHCCCCCCCCCHH
Q ss_conf             8359988899976
Q gi|254780684|r  416 FLKQSPSDLSSED  428 (438)
Q Consensus       416 fl~Q~~~e~~~~~  428 (438)
T Consensus       395 llkQ~~~~p~~~~  407 (507)
T PRK07165        395 LFIQKGFSLYSYR  407 (507)
T ss_pred             HHCCCCCCCCCHH
T ss_conf             8667788986899