HHsearch alignment for GI: 254780684 and conserved domain: PRK07165
>PRK07165 F0F1 ATP synthase subunit alpha; Validated.
Probab=100.00 E-value=0 Score=798.59 Aligned_cols=397 Identities=22% Similarity=0.273 Sum_probs=369.0
Q ss_pred EEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEECCC-CEEECCHHHH
Q ss_conf 289999525899982688887351899956996079999974199799998048557467888997288-5552466688
Q gi|254780684|r 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWC 102 (438)
Q Consensus 24 G~V~~V~G~ii~v~Gl~~~v~iGelv~i~~~~~~v~geVi~~~~~~~~l~~~~~~~gI~~G~~V~~~g~-~~i~vG~~lL 102 (438)
T Consensus 3 pkV~sV~DgIa~V~GL~-n~~~~El~~f~~~-~~v~g~~lnleed~vg~vi~g~~~~i~eGd~V~~Tg~i~~VpVG~~lL 80 (507)
T PRK07165 3 PKIKSIFDYIVEVKGEF-DYQQQQVFTLKNN-PNVKLFVISATEDTAYLLINNEKAKIKIGDEIIELNNENKVLTSKEYF 80 (507)
T ss_pred CEEEEEECEEEEEECCH-HHCCCCEEEECCC-CCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEECCCEEEEECCCCCC
T ss_conf 70899814489996770-2244866996489-962899972553617999987987704899998459857887576644
Q ss_pred HHHHHHHHHHCCCCCCCCCC----CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH-
Q ss_conf 65430776304788777555----3012112543330001331100111245875200223585037526678899999-
Q gi|254780684|r 103 GRVINALGKPIDGDDSLGKG----DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL- 177 (438)
Q Consensus 103 GRViD~lG~PlDg~~~l~~~----~~~~~i~~~~p~p~~R~~i~e~L~TGIr~ID~l~pig~GQR~gIfg~~GvGKt~L- 177 (438)
T Consensus 81 GRVVD~LG~pidp~~~~~~~~~~~~~~~pie~~Apgi~~R~~V~ePLqTGIkaID~miPIGRGQRELIiGDrqTGKTaIA 160 (507)
T PRK07165 81 GKIIDIDGNIIYPKAANPLKSEKAYQTSSAFNLAHGLMTVQTLNEQLYTGIVAIDLLIPIGKGQRELIIGDRQTGKTHIA 160 (507)
T ss_pred CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH
T ss_conf 63688999867898988877654333477455799852367678613434678761355567616777357887788999
Q ss_pred HHHHH-HHCCCCCEEEEECCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 99987-40789838993124652238899998642-77553289841577880344444456777888864267988999
Q gi|254780684|r 178 LSMFA-RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 (438)
Q Consensus 178 l~~i~-~~~~~dv~V~alIGeR~rev~efi~~~~~-~~l~~tvvv~~t~d~~~~~r~~a~~~a~~iAEyfr~~G~~Vll~ 255 (438)
T Consensus 161 ldtIiNQk~~~V~cIYVAIGQK~s~Va~iv~~L~~~gAm~yTiVV~A~sd~-p~~qylAPy~g~aiAEyf~-~~~dvLii 238 (507)
T PRK07165 161 LNTIINQKNRNVKCIYVAIGQKRENLSRIYETLKEHDALKNTIIIDAPSTS-SYEQYLAPYVAMAHAENIS-YNDDVLIV 238 (507)
T ss_pred HHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHEEEEECCCCC-CHHHHHHHHHHHHHHHHHH-CCCCEEEE
T ss_conf 999984546895899998310177999999999877975652576315778-2777778888887889886-46856999
Q ss_pred EECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCCCE
Q ss_conf 70989999998766540477843236632455420044444311367885235543334216764202789998612608
Q gi|254780684|r 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 (438)
Q Consensus 256 ~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l~ERag~~~~~~GSiT~~~~v~~~~dd~~~pi~~~~~~i~DG~ 335 (438)
T Consensus 239 yDDLTkhA~AyReisLll~rPPGReayPgdvFy~hsrLLERa~kl~-g~gSiTaLPIieT~~gDisayIpTNviSITDGQ 317 (507)
T PRK07165 239 FDDLTKHANIYREIALLTNKPVGKEAFPGDIFFAHSKLLERAGKFK-NRKSITALPILQTVDNDITSLISSNIISITDGQ 317 (507)
T ss_pred ECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCEEEEEEEEEECCCCCCCCCCCCEEEECCCE
T ss_conf 6476899999998898727999977899605766168888876126-996157601787027862243566447741762
Q ss_pred EEEEHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 98704277589713114456400022120899999999999999999999999998523446999899999999999999
Q gi|254780684|r 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 (438)
Q Consensus 336 i~L~r~la~~g~~Paid~~~S~SR~~~~~~~~~~~~~~~~~~~~l~~y~~~~~l~~~g~y~~g~d~~~d~~i~~~~~i~~ 415 (438)
T Consensus 318 I~l~~~Lf~~G~rPAInvglSVSRvG~~aQ~k~~k~vag~l~l~~aqy~el~~fa~f~s---dld~~t~~~l~rG~r~~e 394 (507)
T PRK07165 318 IVTSSELFAQGKLPAIDIDLSVSRTGSSVQSKNIAKIAKEISKIYRAYKRQLKLSSLDY---DLNKETSDLLSKGKMIEK 394 (507)
T ss_pred EEECHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHHH
T ss_conf 88517677469886523570065157688899999986365678999999999986545---418999999973289999
Q ss_pred HHCCCCCCCCCHH
Q ss_conf 8359988899976
Q gi|254780684|r 416 FLKQSPSDLSSED 428 (438)
Q Consensus 416 fl~Q~~~e~~~~~ 428 (438)
T Consensus 395 llkQ~~~~p~~~~ 407 (507)
T PRK07165 395 LFIQKGFSLYSYR 407 (507)
T ss_pred HHCCCCCCCCCHH
T ss_conf 8667788986899