HHsearch alignment for GI: 254780684 and conserved domain: PRK07952
>PRK07952 DNA replication protein DnaC; Validated.
Probab=95.09 E-value=0.059 Score=33.22 Aligned_cols=87 Identities=16% Similarity=0.243 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHHHHCCCCEEEEE-CCCCCCHHHHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEE
Q ss_conf 0011124587520022358503752-667889999999987407--8983899312465223889999864277553289
Q gi|254780684|r 143 KGFKTGIRVIDIFTPLCHGQRIGVF-AGSGIGKSTLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219 (438)
Q Consensus 143 e~L~TGIr~ID~l~pig~GQR~gIf-g~~GvGKt~Ll~~i~~~~--~~dv~V~alIGeR~rev~efi~~~~~~~l~~tvv 219 (438)
T Consensus 80 ~al~~a~~y~enf~~---~~~gLlF~G~~GTGKThLA~aIan~Li~~G~sVlf~-------t~~dLl~~lr~t------- 142 (242)
T PRK07952 80 NALSKARQYVEEFDG---NIASFIFSGKPGTGKNHLAAAICNELLLRGKSVLII-------TVADIMSAMKDT------- 142 (242)
T ss_pred HHHHHHHHHHHHHCC---CCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEE-------EHHHHHHHHHHH-------
T ss_conf 999999999986543---887179978999978999999999999879949997-------799999999999-------
Q ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHH
Q ss_conf 84157788034444445677788886426798899970989
Q gi|254780684|r 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 (438)
Q Consensus 220 v~~t~d~~~~~r~~a~~~a~~iAEyfr~~G~~Vll~~Ds~t 260 (438)
T Consensus 143 -~~~~~~-------------~e~~~l~~l~~~dLLIiDdlG 169 (242)
T PRK07952 143 -FRNSET-------------SEEQLLNDLSNVDLLVIDEIG 169 (242)
T ss_pred -HHCCCC-------------CHHHHHHHHHCCCEEEEECCC
T ss_conf -806875-------------699999986318989873014