HHsearch alignment for GI: 254780684 and conserved domain: PRK08084
>PRK08084 DNA replication initiation factor; Provisional.
Probab=92.79 E-value=0.29 Score=28.19 Aligned_cols=40 Identities=25% Similarity=0.195 Sum_probs=26.9
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHC--CCCCEEEEECCCC
Q ss_conf 358503752667889999999987407--8983899312465
Q gi|254780684|r 159 CHGQRIGVFAGSGIGKSTLLSMFARSD--CFDKVIISLVGER 198 (438)
Q Consensus 159 g~GQR~gIfg~~GvGKt~Ll~~i~~~~--~~dv~V~alIGeR 198 (438)
T Consensus 43 ~~~~~l~l~G~~G~GKTHLLqA~~~~~~~~~~~~~yl~~~~~ 84 (235)
T PRK08084 43 EHSGYIYLWGREGAGRSHLLHAACAELSQRGDAVGYVPLDKR 84 (235)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEHHHH
T ss_conf 898769998999988899999999999707985799877986