HHsearch alignment for GI: 254780684 and conserved domain: PRK09099
>PRK09099 type III secretion system ATPase; Provisional.
Probab=100.00 E-value=0 Score=983.86 Aligned_cols=425 Identities=39% Similarity=0.657 Sum_probs=399.6
Q ss_pred HHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCEEEEECCCCCE--EEEEEEECCCEEEEEECCCCCCCC
Q ss_conf 999999997413342120128999952589998268888735189995699607--999997419979999804855746
Q gi|254780684|r 5 LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEIS 82 (438)
Q Consensus 5 l~~l~~~~~~~~~~l~~~~G~V~~V~G~ii~v~Gl~~~v~iGelv~i~~~~~~v--~geVi~~~~~~~~l~~~~~~~gI~ 82 (438)
T Consensus 9 ~~~~~~~l~~~~--~~~~~G~V~~v~g~~i~~~G~~--a~iGelc~i~~~~g~~~~~aEVvgf~~~~~~l~p~~~~~gi~ 84 (441)
T PRK09099 9 ADAMERELAALA--AVRRTGKVLEVIGTLLRVSGLD--VTLGELCELRQRDGTLLQRAEVVGFSRDVALLSPFGELGGLS 84 (441)
T ss_pred HHHHHHHHHCCC--CCEEEEEEEEEECCEEEEEECC--CCCCCEEEEECCCCCCCCEEEEEEEECCEEEEEECCCCCCCC
T ss_conf 999998750477--5304669999978199998178--887886999848997110258999868989999887866788
Q ss_pred CCCEEEECCC-CEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 7888997288-555246668865430776304788777555301211254333000133110011124587520022358
Q gi|254780684|r 83 LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 (438)
Q Consensus 83 ~G~~V~~~g~-~~i~vG~~lLGRViD~lG~PlDg~~~l~~~~~~~~i~~~~p~p~~R~~i~e~L~TGIr~ID~l~pig~G 161 (438)
T Consensus 85 ~G~~V~~tg~~~~VpvG~~lLGRVvD~lG~PlDg~g~i~~~-~~~pi~~~~p~p~~R~~i~epl~TGIraID~l~pigrG 163 (441)
T PRK09099 85 RGTRVIGLGRPLSVPVGPALLGRVIDGLGEPIDGRGPLDCD-TLVPVIAAPPDPMSRRMIEAPLPTGVRIVDGLMTLGEG 163 (441)
T ss_pred CCCEEEECCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
T ss_conf 99999978996378747041488856776556899788876-58875167988200257787412785622366780347
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf 50375266788999999998740789838993124652238899998642-77553289841577880344444456777
Q gi|254780684|r 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240 (438)
Q Consensus 162 QR~gIfg~~GvGKt~Ll~~i~~~~~~dv~V~alIGeR~rev~efi~~~~~-~~l~~tvvv~~t~d~~~~~r~~a~~~a~~ 240 (438)
T Consensus 164 QR~gIf~gsGvGKstLl~~iar~~~~dv~V~~lIGeRgrEv~efi~~~~~~~~l~~svvv~atsd~~~~~R~~a~~~a~a 243 (441)
T PRK09099 164 QRMGIFAPAGVGKSTLMGMFARGTQCDVNVIALIGERGREVREFIELILGEDGMARSVVVCATSDRSSIERAKAAYAATA 243 (441)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 63300158988789999989875136861688637213899999999762456320179861588998899998775015
Q ss_pred HHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCCCEEEEEEEEECCCCC
Q ss_conf 88886426798899970989999998766540477843236632455420044444311367885235543334216764
Q gi|254780684|r 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 (438)
Q Consensus 241 iAEyfr~~G~~Vll~~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l~ERag~~~~~~GSiT~~~~v~~~~dd~ 320 (438)
T Consensus 244 iAEyfrd~Gk~VLl~~DslTr~A~A~REisl~~gepP~~~gYp~~vf~~l~~l~ERag~--~~~GSITai~tVl~~~dd~ 321 (441)
T PRK09099 244 IAEYFRDRGKRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSVFAELPRLLERAGM--GEHGSITALYTVLAEDDSG 321 (441)
T ss_pred HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCCCEEEEEEEECCCCCC
T ss_conf 78899866981899707677999999999986579998566772099887898874037--8998553444455068877
Q ss_pred CCHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 20278999861260898704277589713114456400022120899999999999999999999999998523446999
Q gi|254780684|r 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 (438)
Q Consensus 321 ~~pi~~~~~~i~DG~i~L~r~la~~g~~Paid~~~S~SR~~~~~~~~~~~~~~~~~~~~l~~y~~~~~l~~~g~y~~g~d 400 (438)
T Consensus 322 ~~pi~d~~~si~DGhivLsr~la~~g~yPAIdvl~SvSR~~~~~~~~~~~~~a~~~r~~la~y~e~e~li~~G~y~~G~d 401 (441)
T PRK09099 322 SDPIAEEVRGILDGHMILSREIAARNQYPAIDVLGSLSRVMPQVVPREHVQAAGRLRRLLAKHREVETLLQVGEYRAGSD 401 (441)
T ss_pred CCCHHHHHHHHCCEEEEECHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 78767877767063899858788669998717741554244344159999999999999998999999997368668989
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHH
Q ss_conf 8999999999999998359988899976-89999987
Q gi|254780684|r 401 LILDKAVHQVPIIYDFLKQSPSDLSSED-VFQEITKK 436 (438)
Q Consensus 401 ~~~d~~i~~~~~i~~fl~Q~~~e~~~~~-~~~~~~~~ 436 (438)
T Consensus 402 ~~~d~ai~~~~~i~~fL~Q~~~e~~~~~~~~~~l~~l 438 (441)
T PRK09099 402 PVADEAIAKIDAIRDFLSQRTDELSDPDATLAALAEL 438 (441)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 7899999878999998389988998999999999998