HHsearch alignment for GI: 254780684 and conserved domain: PRK09361

Probab=97.92  E-value=8.9e-05  Score=53.82  Aligned_cols=179  Identities=21%  Similarity=0.250  Sum_probs=87.5

Q ss_pred             CCCCHHHHHHHHHHHHH--HCCCCEEEEECCCCCCHHHHHHHHHHHC--CCCCEEEEECCCCCHHHHHHHHHHHC---CC
Q ss_conf             11001112458752002--2358503752667889999999987407--89838993124652238899998642---77
Q gi|254780684|r  141 VEKGFKTGIRVIDIFTP--LCHGQRIGVFAGSGIGKSTLLSMFARSD--CFDKVIISLVGERGREVREFIEDYLG---DN  213 (438)
Q Consensus       141 i~e~L~TGIr~ID~l~p--ig~GQR~gIfg~~GvGKt~Ll~~i~~~~--~~dv~V~alIGeR~rev~efi~~~~~---~~  213 (438)
T Consensus         1 ~~erisTG~~~lD~~LgGGi~~G~itei~G~pG~GKTtl~lq~a~~~~~~g~~vlYi-dtE~-~~~er~~-qi~~~~~~~   77 (224)
T PRK09361          1 IEELLPTGCKSLDELLGGGIERGTITQIYGPPGSGKTNICIQLAVEAARQGKKVIYI-DTEG-LSPERFK-QIAGEDFEE   77 (224)
T ss_pred             CCCEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE-CCCC-CCHHHHH-HHHCCCHHH
T ss_conf             985303797899986269988887999989999859999999999999749909996-7876-7889999-985657345


Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHH
Q ss_conf             55328984157788034444445677788886426798899970989999998766540477843236632455420044
Q gi|254780684|r  214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL  293 (438)
Q Consensus       214 l~~tvvv~~t~d~~~~~r~~a~~~a~~iAEyfr~~G~~Vll~~Ds~tr~a~A~reis~~~ge~P~~~gyp~~~~~~~~~l  293 (438)
T Consensus        78 ~~~~i~~~~~~~~~~~------~~~i~~~~~~~~~-~~~lvVIDSi~~~~~~e~~----~~~~~~~---~~~l~~~~~~L  143 (224)
T PRK09361         78 LLSNIIIFEPSSFEEQ------REAIQKAEKIAKE-NVGLIVLDSATSLYRLELD----DNDNSKL---NRELGKQISHL  143 (224)
T ss_pred             HHHCCEEECCCCHHHH------HHHHHHHHHHHHC-CCCEEEEECCHHHEEHHCC----CCCCHHH---HHHHHHHHHHH
T ss_conf             4206147247988999------9999999987505-8738999623010000014----5765899---99999999999


Q ss_pred             HHHHHCCCCCCCCEEEEEE--EEECCC-CCCCHH-HHHHHHHCCCEEEEEHH
Q ss_conf             4443113678852355433--342167-642027-89998612608987042
Q gi|254780684|r  294 LERIGPSEKEKGNITAVIS--VLVDGD-NHNDPI-ADSVRSILDGHIVLNRS  341 (438)
Q Consensus       294 ~ERag~~~~~~GSiT~~~~--v~~~~d-d~~~pi-~~~~~~i~DG~i~L~r~  341 (438)
T Consensus       144 ~~~a~-----~~~~~vvl~nqV~~~~~~~~~~paGg~~l~h~~d~~l~le~~  190 (224)
T PRK09361        144 LSLAR-----KHNIAVVITNQVYSDIDSDGLRPLGGHTLEHWSKAILRLEKL  190 (224)
T ss_pred             HHHHH-----HCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEC
T ss_conf             99999-----719869999668852676544446541222105799999625