HHsearch alignment for GI: 254780684 and conserved domain: TIGR01842

>TIGR01842 type_I_sec_PrtD type I secretion system ATPase; InterPro: IPR010128 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0015031 protein transport, 0016021 integral to membrane.
Probab=95.53  E-value=0.029  Score=35.53  Aligned_cols=83  Identities=17%  Similarity=0.227  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHC--------------------CCC------CCCCCCCEEEEECC---CCCCCCCCCCCCCCHHH
Q ss_conf             46668865430776304--------------------788------77755530121125---43330001331100111
Q gi|254780684|r   97 PSACWCGRVINALGKPI--------------------DGD------DSLGKGDLSMEIMS---KVPPAMNRQRVEKGFKT  147 (438)
Q Consensus        97 vG~~lLGRViD~lG~Pl--------------------Dg~------~~l~~~~~~~~i~~---~~p~p~~R~~i~e~L~T  147 (438)
T Consensus       266 AgSIl~GRaLaPid~aI~~Wk~~~~Ar~ay~Rl~~ll~~~p~~~~~m~LP~P~G~L~vE~v~~~PP~~~~---WsqPivP  342 (556)
T TIGR01842       266 AGSILVGRALAPIDGAIGGWKQFSAARQAYKRLNELLAEYPSRAEAMALPEPEGHLSVENVTIVPPGGKK---WSQPIVP  342 (556)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC---CCCCCCC
T ss_conf             8889997784107788888888999999999999999857888754578898636888776510786313---5789776


Q ss_pred             HHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf             24587520022358503752667889999999987
Q gi|254780684|r  148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA  182 (438)
Q Consensus       148 GIr~ID~l~pig~GQR~gIfg~~GvGKt~Ll~~i~  182 (438)
T Consensus       343 k~~l~gi~F~~~aGe~laIIGPSgSGKStLaR~~v  377 (556)
T TIGR01842       343 KPTLRGISFAIQAGEALAIIGPSGSGKSTLARILV  377 (556)
T ss_pred             HHHHCCCCEEECCCCEEEEECCCCCCHHHHHHHHH
T ss_conf             14227862156377458887478652588987887