HHsearch alignment for GI: 254780684 and conserved domain: TIGR02640
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.
Probab=91.49 E-value=0.23 Score=28.89 Aligned_cols=114 Identities=24% Similarity=0.291 Sum_probs=58.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCEEEE---------ECCC-CCHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHH
Q ss_conf 375266788999999998740789838993---------1246-522388999986427755328984157788034444
Q gi|254780684|r 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIIS---------LVGE-RGREVREFIEDYLGDNLKKSVVVVATSDESPILRKM 233 (438)
Q Consensus 164 ~gIfg~~GvGKt~Ll~~i~~~~~~dv~V~a---------lIGe-R~rev~efi~~~~~~~l~~tvvv~~t~d~~~~~r~~ 233 (438)
T Consensus 24 vHl~GPaG~GKT~LA~hvA~~r~RPV~l~~Gd~eL~~~DLvG~~~g~~~~kv~Dq--------fihnV~K~~d~~~~~W~ 95 (265)
T TIGR02640 24 VHLRGPAGTGKTTLAMHVARKRDRPVVLINGDAELTTSDLVGSYAGYTRKKVVDQ--------FIHNVVKLEDIVRQNWV 95 (265)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEC--------CEEEEECCCCCCCCCCC
T ss_conf 6744788855689999999736896899865823265442315467522223201--------21113425122002667
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHH--C---CCCCCCCCCCHHHHHHCCHH
Q ss_conf 445677788886426798899970989999998766540--4---77843236632455420044
Q gi|254780684|r 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN--S---GELPVARGYPTSVFSELPRL 293 (438)
Q Consensus 234 a~~~a~~iAEyfr~~G~~Vll~~Ds~tr~a~A~reis~~--~---ge~P~~~gyp~~~~~~~~~l 293 (438)
T Consensus 96 D~rLt~Av~eG~-------TLVYdEF~RskP~~nNVLLSvlEE~vL~LPg~~~~~~Yv-~VhP~F 152 (265)
T TIGR02640 96 DNRLTLAVREGF-------TLVYDEFTRSKPETNNVLLSVLEEGVLELPGKRGESRYV-DVHPEF 152 (265)
T ss_pred CCHHHHHHHCCC-------EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCE-EECCCC
T ss_conf 835789975697-------276647578862045656755552321588878778722-578870