HHsearch alignment for GI: 254780684 and conserved domain: TIGR02782

>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..
Probab=96.47  E-value=0.02  Score=36.70  Aligned_cols=147  Identities=27%  Similarity=0.389  Sum_probs=98.2

Q ss_pred             ECCCE-EEEEECCCCCCC---CCCCEEEECCC-CEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC--CC-----C
Q ss_conf             41997-999980485574---67888997288-5552466688654307763047887775553012112--54-----3
Q gi|254780684|r   65 INLDI-VYICPVGIGEEI---SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM--SK-----V  132 (438)
Q Consensus        65 ~~~~~-~~l~~~~~~~gI---~~G~~V~~~g~-~~i~vG~~lLGRViD~lG~PlDg~~~l~~~~~~~~i~--~~-----~  132 (438)
T Consensus        18 LdD~~vvEIMLNpDG~-Lwve~Lg~G~~~~G~t~~~~~a~~Ii~~vA~~l~~~V~~~~PivegE--LPldflGsRFeGl~   94 (315)
T TIGR02782        18 LDDPKVVEIMLNPDGK-LWVERLGEGMEPLGKTVSPADAERIIGLVADYLGTEVDRDKPIVEGE--LPLDFLGSRFEGLL   94 (315)
T ss_pred             HCCCCEEEEEECCCCH-HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCCEEEEC--CCCCHHHCCCCCCC
T ss_conf             3798838998669870-10500679730016611789999999999876446043578626610--75111201100468


Q ss_pred             CC------CCCCCC------CCCCHHHHH---HHHHHHHHHCCC-CEEEEECCCCCCHHHHH----HHHHH-HCCCCCEE
Q ss_conf             33------000133------110011124---587520022358-50375266788999999----99874-07898389
Q gi|254780684|r  133 PP------AMNRQR------VEKGFKTGI---RVIDIFTPLCHG-QRIGVFAGSGIGKSTLL----SMFAR-SDCFDKVI  191 (438)
Q Consensus       133 p~------p~~R~~------i~e~L~TGI---r~ID~l~pig~G-QR~gIfg~~GvGKt~Ll----~~i~~-~~~~dv~V  191 (438)
T Consensus        95 PPVV~~p~F~IRkkA~~vfTLDdYV~~gimtaaQ~d~l~~Av~ar~NIlv~GGTGSGKTTLaNAlla~I~~l~~P~dR~v  174 (315)
T TIGR02782        95 PPVVEAPSFAIRKKAVRVFTLDDYVEAGIMTAAQRDVLREAVAARKNILVVGGTGSGKTTLANALLAEIAKLNDPDDRVV  174 (315)
T ss_pred             CCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf             77556551011102241047077764044557899999999971298899814588579999999998852169996189


Q ss_pred             EEECCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCCC
Q ss_conf             93124652238899998642-7755328984157788
Q gi|254780684|r  192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDES  227 (438)
Q Consensus       192 ~alIGeR~rev~efi~~~~~-~~l~~tvvv~~t~d~~  227 (438)
T Consensus       175 I-------------iEDT~ElQC~A~N~V~lrT~d~~  198 (315)
T TIGR02782       175 I-------------IEDTAELQCAAENLVALRTSDDV  198 (315)
T ss_pred             E-------------EECCHHHHHCCCCEEEEECCCCC
T ss_conf             9-------------85471320137870687448986