HHsearch alignment for GI: 254780684 and conserved domain: TIGR03375
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=94.42 E-value=0.029 Score=35.44 Aligned_cols=19 Identities=26% Similarity=0.289 Sum_probs=9.5
Q ss_pred EEECCCCCCCHHHHHHHHH
Q ss_conf 3421676420278999861
Q gi|254780684|r 313 VLVDGDNHNDPIADSVRSI 331 (438)
Q Consensus 313 v~~~~dd~~~pi~~~~~~i 331 (438)
T Consensus 522 i~idg~~~~~~~~~~~r~~ 540 (694)
T TIGR03375 522 VLLDGVDIRQIDPADLRRN 540 (694)
T ss_pred EEECCEECCCCCHHHHHHH
T ss_conf 9989854254999999730