HHsearch alignment for GI: 254780684 and conserved domain: TIGR03522
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=92.72 E-value=0.089 Score=31.95 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=28.6
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 5200223585037526678899999999874078
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~ 186 (438)
T Consensus 20 ~vsf~v~~Gei~gllGpNGAGKTTl~~~l~Gl~~ 53 (301)
T TIGR03522 20 EVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP 53 (301)
T ss_pred CEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 6067885981999999999819999999967956