>cd01854 YjeQ_engC YjeQ/EngC. YjeQ (YloQ in Bacillus subtilis) represents a protein family whose members are broadly conserved in bacteria and have been shown to be essential to the growth of E. coli and B. subtilis. Proteins of the YjeQ family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases. All YjeQ family proteins display a unique domain architecture, which includes an N-terminal OB-fold RNA-binding domain, the central permuted GTPase domain, and a zinc knuckle-like C-terminal cysteine domain. This domain architecture suggests a role for YjeQ as a regulator of translation.

Probab=93.45 E-value=0.083 Score=32.15 Aligned_cols=184 Identities=17% Similarity=0.200 Sum_probs=81.2 Q ss_pred CCCCCEEEEECCCCCEEEEEEEECCCEEEEE-ECCC--CCCCCCC-CEEEECCCCEEE-CCHHHHHHHHHHHHHHCCCCC Q ss_conf 8735189995699607999997419979999-8048--5574678-889972885552-466688654307763047887 Q gi|254780684|r 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYIC-PVGI--GEEISLG-DLVFHWGRFRIS-PSACWCGRVINALGKPIDGDD 117 (438) Q Consensus 43 v~iGelv~i~~~~~~v~geVi~~~~~~~~l~-~~~~--~~gI~~G-~~V~~~g~~~i~-vG~~lLGRViD~lG~PlDg~~ 117 (438) T Consensus 35 ~~VGD~V~~~~~~-~~~g~I~~i~pR~n~l~R~~~~~~~q~iaANiD~v~IV~s~~~p~~~~~~idR~Lv~a~~~-~-i~ 111 (287) T cd01854 35 PVVGDWVEVEPDD-DGEGVIVRVLPRKNLLSRPAAGGREQVIAANVDQLVIVVSLNEPFFNPRLLDRYLVAAEAA-G-IE 111 (287) T ss_pred CCCCEEEEEEECC-CCEEEEEEEECCCEEEECCCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHC-C-CC T ss_conf 6346599999747-9808999994783279823799843689972668999952689989989999999999977-9-96 Q ss_pred CCCCCCEEEEECCCCC---------CC-CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCC Q ss_conf 7755530121125433---------30-0013311001112458752002235850375266788999999998740789 Q gi|254780684|r 118 SLGKGDLSMEIMSKVP---------PA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 (438) Q Consensus 118 ~l~~~~~~~~i~~~~p---------~p-~~R~~i~e~L~TGIr~ID~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~~ 187 (438) T Consensus 112 pvivln-K~DL~~~~~~~~~~~~~~~~gy~v~~~S~~~~~g---~~~L~~~l~~k~~v~~G~SGvGKSSLiN~L~~~~~- 186 (287) T cd01854 112 PVIVLT-KADLLDDEEEELELVEALALGYPVLAVSAKTGEG---LDELREYLKGKTSVLVGQSGVGKSTLINALLPDLD- 186 (287) T ss_pred EEEEEE-CHHCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC---HHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCHHH- T ss_conf 899998-6221994899999999872998499996689858---89999874798899988998888999987462121- Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCC---CCEEEEEECC----CCCHHHHHHHHH--HHHHHHHHHHH Q ss_conf 838993124652238899998642775---5328984157----788034444445--67778888642 Q gi|254780684|r 188 DKVIISLVGERGREVREFIEDYLGDNL---KKSVVVVATS----DESPILRKMAPL--TAVTIAEYFSS 247 (438) Q Consensus 188 dv~V~alIGeR~rev~efi~~~~~~~l---~~tvvv~~t~----d~~~~~r~~a~~--~a~~iAEyfr~ 247 (438) T Consensus 187 ------------~~t~~vs~~-~~rGrHTTt~~~L~~l~~gg~iiDTPG~r~~~l~~~~~~~l~~~F~e 242 (287) T cd01854 187 ------------LATGEISEK-LGRGRHTTTHRELFPLPGGGLLIDTPGFREFGLLHIDPEELAHYFPE 242 (287) T ss_pred ------------HHHHHHHHH-HCCCCEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHCHH T ss_conf ------------256666776-08985014157999928995898689876356777898999886878

HHsearch alignment for GI: 254780684 and conserved domain: cd01854