>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins, and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains, which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=95.27  E-value=0.012  Score=38.28  Aligned_cols=33  Identities=24%  Similarity=0.427  Sum_probs=27.8

Q ss_pred             HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             752002235850375266788999999998740
Q gi|254780684|r  152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS  184 (438)
Q Consensus       152 ID~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~  184 (438)
T Consensus        16 l~~~~~v~~GEiv~ilGpNGaGKSTllk~i~G~   48 (177)
T cd03222          16 LVELGVVKEGEVIGIVGPNGTGKTTAVKILAGQ   48 (177)
T ss_pred             ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf             658995589989999899999999999999688