HHsearch alignment for GI: 254780684 and conserved domain: cd03225
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=95.10 E-value=0.016 Score=37.33 Aligned_cols=32 Identities=31% Similarity=0.424 Sum_probs=28.3
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 52002235850375266788999999998740
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~ 184 (438)
T Consensus 19 ~vsl~i~~Gei~~iiG~nGaGKSTLlk~i~Gl 50 (211)
T cd03225 19 DISLTIKKGEFVLIVGPNGSGKSTLLRLLNGL 50 (211)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 31788849979999889999899999999646