HHsearch alignment for GI: 254780684 and conserved domain: cd03230
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=93.54 E-value=0.095 Score=31.74 Aligned_cols=34 Identities=26% Similarity=0.378 Sum_probs=28.9
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 5200223585037526678899999999874078
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~ 186 (438)
T Consensus 18 ~vsl~i~~Gei~gl~G~NGaGKSTLl~~i~Gl~~ 51 (173)
T cd03230 18 DISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK 51 (173)
T ss_pred CEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 2087887993999987899799999999976857