HHsearch alignment for GI: 254780684 and conserved domain: cd03256
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.23 E-value=0.014 Score=37.90 Aligned_cols=36 Identities=28% Similarity=0.304 Sum_probs=29.8
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
Q ss_conf 520022358503752667889999999987407898
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~~d 188 (438)
T Consensus 19 ~isl~i~~Ge~~~iiGpsGsGKSTLl~~i~gl~~p~ 54 (241)
T cd03256 19 DVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT 54 (241)
T ss_pred CCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCC
T ss_conf 838899999899999999833999999997499998