HHsearch alignment for GI: 254780684 and conserved domain: cd03265
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=93.25 E-value=0.067 Score=32.84 Aligned_cols=40 Identities=18% Similarity=0.276 Sum_probs=31.2
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHC---CCCCEEE
Q ss_conf 520022358503752667889999999987407---8983899
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD---CFDKVII 192 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~---~~dv~V~ 192 (438)
T Consensus 18 ~is~~v~~Gei~gllGpNGAGKSTll~~i~Gl~~p~~G~i~i~ 60 (220)
T cd03265 18 GVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVA 60 (220)
T ss_pred CCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEC
T ss_conf 8267988983999999998719999999976978896289999