HHsearch alignment for GI: 254780684 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=94.74 E-value=0.023 Score=36.19 Aligned_cols=42 Identities=29% Similarity=0.366 Sum_probs=31.6
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCC--CCCEEEEE
Q ss_conf 5200223585037526678899999999874078--98389931
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC--FDKVIISL 194 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~--~dv~V~al 194 (438)
T Consensus 39 ~inl~I~~Ge~vaIvG~sGsGKSTL~~ll~gl~~p~~G~I~idg 82 (257)
T cd03288 39 HVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDG 82 (257)
T ss_pred CEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECC
T ss_conf 53899879999999999998199999999605667888899998