HHsearch alignment for GI: 254780684 and conserved domain: cd03299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.47 E-value=0.019 Score=36.85 Aligned_cols=37 Identities=24% Similarity=0.249 Sum_probs=31.0
Q ss_pred HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 5200223585037526678899999999874078983
Q gi|254780684|r 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189 (438)
Q Consensus 153 D~l~pig~GQR~gIfg~~GvGKt~Ll~~i~~~~~~dv 189 (438)
T Consensus 17 ~vs~~v~~Ge~~~iiGpSGsGKSTLlr~i~Gl~~p~~ 53 (235)
T cd03299 17 NVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDS 53 (235)
T ss_pred CCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCC
T ss_conf 1487988998999999996359999999974999996