HHsearch alignment for GI: 254780684 and conserved domain: pfam08423
>pfam08423 Rad51 Rad51. Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein.
Probab=96.42 E-value=0.0067 Score=40.12 Aligned_cols=129 Identities=16% Similarity=0.136 Sum_probs=69.9
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCCCHHHHHHHHHHHC--------CCCCEEEEECC--CC
Q ss_conf 43330001331100111245875200223--58503752667889999999987407--------89838993124--65
Q gi|254780684|r 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLC--HGQRIGVFAGSGIGKSTLLSMFARSD--------CFDKVIISLVG--ER 198 (438)
Q Consensus 131 ~~p~p~~R~~i~e~L~TGIr~ID~l~pig--~GQR~gIfg~~GvGKt~Ll~~i~~~~--------~~dv~V~alIG--eR 198 (438)
T Consensus 11 t~~~~~~~r~~~~~isTg~~~LD~lLgGGi~~g~ITEi~G~~gsGKTQlc~qlav~~qlp~~~gg~~g~vvyIDTEg~f~ 90 (261)
T pfam08423 11 TATELHQRRSEVIRITTGSKELDKLLGGGIETGSITEVFGEFRTGKTQLCHTLCVTCQLPLEMGGGEGKALYIDTEGTFR 90 (261)
T ss_pred CHHHHHHHHCCCCEECCCCHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHCCCCCEEEEEECCCCCC
T ss_conf 39999997548735778987899873798667729999899888789999999999407096569997289993688869
Q ss_pred CHHHHHHHHHHH-C-CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHH
Q ss_conf 223889999864-2-775532898415778803444444567778888642679889997098999999
Q gi|254780684|r 199 GREVREFIEDYL-G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 (438)
Q Consensus 199 ~rev~efi~~~~-~-~~l~~tvvv~~t~d~~~~~r~~a~~~a~~iAEyfr~~G~~Vll~~Ds~tr~a~A 265 (438)
T Consensus 91 ~eRl~qia~~~~~~~~~~L~~I~v~r~~~-~-~~~~~~l---~~~~~~~~-~~~v~LvVvDSiaalfR~ 153 (261)
T pfam08423 91 PERIVAIAERFGLDPEEVLDNIAYARAYN-T-EHQMQLL---LQAAAMMS-ESRFALLIVDSATALYRT 153 (261)
T ss_pred HHHHHHHHHHHCCCHHHHHHHCEECCCCC-H-HHHHHHH---HHHHHHHH-CCCCEEEEEECCCEEEEE
T ss_conf 89999999982999789875331416899-8-9999999---99999873-178349998324002333