BLAST/PSIBLAST alignment of GI: 254780684 and GI: 325291944 at iteration 1
>gi|325291944|ref|YP_004277808.1| flagellum-specific ATP synthase [Agrobacterium sp. H13-3] Length = 468
>gi|325059797|gb|ADY63488.1| flagellum-specific ATP synthase [Agrobacterium sp. H13-3] Length = 468
 Score =  582 bits (1499), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/440 (62%), Positives = 342/440 (77%), Gaps = 2/440 (0%)

Query: 1   MQKNLETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
           +   L  LA LA  Y+  +  V  GG++ +I + +YTV+ LS++V LG+FV H+     +
Sbjct: 13  ISPKLAQLASLAGHYADPEFSVAPGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGIH 72

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R+  DI Y+CP+  GE I + D V   G FR++P   WCGR INALG+PIDG   
Sbjct: 73  LGEVVRVEPDICYVCPIEPGEPIGIHDTVIRKGAFRVAPDDSWCGRTINALGEPIDGKGP 132

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G     I S  PP+M R+RVE  FKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL
Sbjct: 133 LASGTERRPISSNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 192

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           SM A++D FDKV+I LVGERGREVREFIED +G+N+ KSV VVATSDESP+LRKMAPL+A
Sbjct: 193 SMLAKADAFDKVVIGLVGERGREVREFIEDTMGENMGKSVAVVATSDESPMLRKMAPLSA 252

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
           VTIAEYF  +GDNVLLI+DS+TRFAH+IRE+A  SGE PVARGYP SVF+ELPRLLER G
Sbjct: 253 VTIAEYFRDRGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAG 312

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G ITA++S+LVDGDNHNDPIADS R ILDGHIVL+RSLAEEGRYPP++PLAS+S
Sbjct: 313 PGAEGSGTITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASIS 372

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA KAW+ D++KLVS L  L+HRFEETRD+RLIGGYRPG D  LD AV QVPIIY+ LK
Sbjct: 373 RLAKKAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYETLK 432

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           Q P++ +++D + ++   L+
Sbjct: 433 QLPNEPAAQDAYADLATALR 452