BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780684|ref|YP_003065097.1| flagellum-specific ATP synthase [Candidatus Liberibacter asiaticus str. psy62] (438 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780684|ref|YP_003065097.1| flagellum-specific ATP synthase [Candidatus Liberibacter asiaticus str. psy62] gi|254040361|gb|ACT57157.1| flagellum-specific ATP synthase [Candidatus Liberibacter asiaticus str. psy62] Length = 438 Score = 892 bits (2304), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/438 (100%), Positives = 438/438 (100%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG Sbjct: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG Sbjct: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120 Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM Sbjct: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT Sbjct: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS Sbjct: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL Sbjct: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS Sbjct: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 Query: 421 PSDLSSEDVFQEITKKLQ 438 PSDLSSEDVFQEITKKLQ Sbjct: 421 PSDLSSEDVFQEITKKLQ 438 >gi|315121851|ref|YP_004062340.1| flagellum-specific ATP synthase [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495253|gb|ADR51852.1| flagellum-specific ATP synthase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 449 Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/438 (84%), Positives = 400/438 (91%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 MQ L LAQLAE+YSK++VVQGGYI+SI VYYTVT LS+YVCLGDFVVH+GK SDNLG Sbjct: 1 MQNKLARLAQLAENYSKSIVVQGGYINSIMPVYYTVTGLSKYVCLGDFVVHRGKYSDNLG 60 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120 QVIRI+ D++Y+CPVGI + I+LGDLVF G FRISPS CWCGRV+NALGKPIDGD SL Sbjct: 61 QVIRIDHDVLYVCPVGIDKTITLGDLVFRQGPFRISPSECWCGRVLNALGKPIDGDFSLK 120 Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 G SM+I+ K+P MNRQRVEKGFKTGIRVIDIFTPLC+GQRIG+FAGSGIGKSTLLSM Sbjct: 121 TGHFSMDIIGKIPSVMNRQRVEKGFKTGIRVIDIFTPLCYGQRIGIFAGSGIGKSTLLSM 180 Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240 FA+SDCFDKV+ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA T Sbjct: 181 FAKSDCFDKVVISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAFT 240 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 IAEYF SKGDNVLLILDSITRFAH+IREI+ NSGELPV RGYP SVFSELPRLLER GP Sbjct: 241 IAEYFCSKGDNVLLILDSITRFAHAIREISMNSGELPVTRGYPASVFSELPRLLERAGPR 300 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 EKEKG+ITA+ISVLVDGDNHNDPIADSVRSILDGH+VL RSLAEEGRYPPVDPLASVSRL Sbjct: 301 EKEKGSITAIISVLVDGDNHNDPIADSVRSILDGHVVLKRSLAEEGRYPPVDPLASVSRL 360 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 A KAWS+DE+KLV+SL +LIH+FEETRDIRLIGGYRPGVD+ LDKAV QVPIIYDFLKQS Sbjct: 361 AYKAWSSDEEKLVASLKNLIHQFEETRDIRLIGGYRPGVDINLDKAVRQVPIIYDFLKQS 420 Query: 421 PSDLSSEDVFQEITKKLQ 438 PSDL +DVF EITKKLQ Sbjct: 421 PSDLLLKDVFLEITKKLQ 438 >gi|222084860|ref|YP_002543389.1| H(+)-transporting ATP synthase [Agrobacterium radiobacter K84] gi|221722308|gb|ACM25464.1| H(+)-transporting ATP synthase [Agrobacterium radiobacter K84] Length = 462 Score = 588 bits (1517), Expect = e-166, Method: Compositional matrix adjust. Identities = 277/440 (62%), Positives = 343/440 (77%), Gaps = 2/440 (0%) Query: 1 MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 + L +A LAE Y ++N V GG++ +I + +YTV LS++V LG+FV H+ + Sbjct: 11 LSPRLPHMAALAEHYAMTENAVAHGGHVRTIAAGHYTVAGLSRHVRLGEFVAHRSATGVH 70 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 LG+V+R+ ++ Y+CP+ GE I + D V G FRI+PS WCGR IN+LG+PIDG Sbjct: 71 LGEVVRVEPELTYVCPIEPGEPIGIHDTVIRKGAFRIAPSESWCGRTINSLGEPIDGLGP 130 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L G I + PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL Sbjct: 131 LTAGTQPRSISNTAPPSMTRKRVETGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 SM AR+D FDKV+I+LVGERGREVREFIED LG +++KSV VVATSDESP+LRKMAPL+A Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGTHMQKSVAVVATSDESPMLRKMAPLSA 250 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +TIAE+F +GDNVLLI+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G Sbjct: 251 ITIAEHFRDQGDNVLLIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLASVS Sbjct: 311 PGPEGTGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASVS 370 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA KAW+ D++KLVS L L+HR+EETRD+RLIGGYR G D LD AV QVPIIY+ LK Sbjct: 371 RLARKAWTPDQEKLVSRLKALVHRYEETRDLRLIGGYRQGADADLDIAVRQVPIIYEILK 430 Query: 419 QSPSDLSSEDVFQEITKKLQ 438 Q+P + S D F ++ L+ Sbjct: 431 QTPGERPSADAFTDLATALK 450 >gi|227820853|ref|YP_002824823.1| flagellum-specific ATP synthase [Sinorhizobium fredii NGR234] gi|227339852|gb|ACP24070.1| flagellum-specific ATP synthase [Sinorhizobium fredii NGR234] Length = 466 Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust. Identities = 278/437 (63%), Positives = 344/437 (78%), Gaps = 2/437 (0%) Query: 4 NLETLAQLAEDYSKNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61 +L LA L E Y+ V GG++ +I+ +YTV+ LS++V LGDFV H+ +LG+ Sbjct: 14 SLAALAGLVERYANPDVSIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSATGTHLGE 73 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121 V+R+ D V +CP+ G+ I + D V G FRI+P+ WCGR INAL +PIDG L + Sbjct: 74 VVRVEPDRVVVCPIEPGDPIGIHDTVIRKGAFRIAPTDNWCGRTINALAEPIDGRGPLMQ 133 Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 GD+ I + PP+M R+RVE+GFKTG+R +DIF+PLC GQR+G+FAGSG+GKSTLLSM Sbjct: 134 GDMRRSISNTAPPSMTRRRVEQGFKTGVRAVDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241 AR+D FDKV+I+LVGERGREVREFIED LGDNL KSV VVATSDESP+LRKMAPLTAVTI Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGDNLAKSVAVVATSDESPMLRKMAPLTAVTI 253 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AE++ KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPP+DPLAS+SRLA Sbjct: 314 EGTGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPIDPLASISRLA 373 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421 KAW+ D++KLV+ L LIHRFEETRD+RLIGGYR G D LD A+ QVP+IYD LKQ+P Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRAGGDPDLDMAIKQVPVIYDVLKQTP 433 Query: 422 SDLSSEDVFQEITKKLQ 438 + S D F ++ L+ Sbjct: 434 GERSVADAFTDLANALK 450 >gi|15887903|ref|NP_353584.1| flagellum-specific ATP synthase [Agrobacterium tumefaciens str. C58] gi|6225361|sp|O34171|FLII_AGRT5 RecName: Full=Flagellum-specific ATP synthase gi|2459709|gb|AAB71785.1| FliI [Agrobacterium tumefaciens] gi|15155495|gb|AAK86369.1| flagellum-specific ATP synthase [Agrobacterium tumefaciens str. C58] Length = 473 Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust. Identities = 275/440 (62%), Positives = 343/440 (77%), Gaps = 2/440 (0%) Query: 1 MQKNLETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 + L LA LA Y+ + V GG++ +I + +YTV+ LS++V LG+FV H+ + Sbjct: 18 ISPKLAQLASLAGHYADPEFSVAHGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGIH 77 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 LG+V+R+ DI Y+CP+ GE I + D V G FR+SP WCGR INALG+PIDG Sbjct: 78 LGEVVRVEPDICYVCPIEPGEPIGIHDTVIRKGAFRVSPDESWCGRTINALGEPIDGQGP 137 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L G + I + PP+M R+RVE FKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL Sbjct: 138 LASGIVRRSISNNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 197 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 SM A++D FDKV+I+LVGERGREVREFIED +GDN+ KSV VVATSDESP+LRKMAPL+A Sbjct: 198 SMLAKADAFDKVVIALVGERGREVREFIEDTMGDNMSKSVAVVATSDESPMLRKMAPLSA 257 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 VTIAE+F +GDNVLLI+DS+TRFAH+IRE+A SGE PVARGYP SVF+ELPRLLER G Sbjct: 258 VTIAEHFRDQGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAG 317 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + G ITA++S+LVDGDNHNDPIADS R ILDGHIVL+RSLAEEGRYPP++PLAS+S Sbjct: 318 PGAEGTGTITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASIS 377 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA KAW+ D++KLVS L L+HRFEETRD+RLIGGYRPG D LD AV QVPIIY+ LK Sbjct: 378 RLAKKAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYETLK 437 Query: 419 QSPSDLSSEDVFQEITKKLQ 438 Q P + +++D + ++ L+ Sbjct: 438 QLPDEPAAQDAYADLATALR 457 >gi|325291944|ref|YP_004277808.1| flagellum-specific ATP synthase [Agrobacterium sp. H13-3] gi|325059797|gb|ADY63488.1| flagellum-specific ATP synthase [Agrobacterium sp. H13-3] Length = 468 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 275/440 (62%), Positives = 342/440 (77%), Gaps = 2/440 (0%) Query: 1 MQKNLETLAQLAEDYS--KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 + L LA LA Y+ + V GG++ +I + +YTV+ LS++V LG+FV H+ + Sbjct: 13 ISPKLAQLASLAGHYADPEFSVAPGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGIH 72 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 LG+V+R+ DI Y+CP+ GE I + D V G FR++P WCGR INALG+PIDG Sbjct: 73 LGEVVRVEPDICYVCPIEPGEPIGIHDTVIRKGAFRVAPDDSWCGRTINALGEPIDGKGP 132 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L G I S PP+M R+RVE FKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL Sbjct: 133 LASGTERRPISSNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 192 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 SM A++D FDKV+I LVGERGREVREFIED +G+N+ KSV VVATSDESP+LRKMAPL+A Sbjct: 193 SMLAKADAFDKVVIGLVGERGREVREFIEDTMGENMGKSVAVVATSDESPMLRKMAPLSA 252 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 VTIAEYF +GDNVLLI+DS+TRFAH+IRE+A SGE PVARGYP SVF+ELPRLLER G Sbjct: 253 VTIAEYFRDRGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAG 312 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + G ITA++S+LVDGDNHNDPIADS R ILDGHIVL+RSLAEEGRYPP++PLAS+S Sbjct: 313 PGAEGSGTITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASIS 372 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA KAW+ D++KLVS L L+HRFEETRD+RLIGGYRPG D LD AV QVPIIY+ LK Sbjct: 373 RLAKKAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYETLK 432 Query: 419 QSPSDLSSEDVFQEITKKLQ 438 Q P++ +++D + ++ L+ Sbjct: 433 QLPNEPAAQDAYADLATALR 452 >gi|209547923|ref|YP_002279840.1| flagellum-specific ATP synthase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533679|gb|ACI53614.1| flagellar protein export ATPase FliI [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 465 Score = 578 bits (1491), Expect = e-163, Method: Compositional matrix adjust. Identities = 279/432 (64%), Positives = 335/432 (77%), Gaps = 2/432 (0%) Query: 1 MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 + L LA L E Y+ V GG + +I + +YTV LS++V LG+FV H+ + Sbjct: 11 LSPKLAHLAGLVERYASPEFSVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSATGIH 70 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 LG+V+R+ D++Y+CP+ GE I + D V G FRISPS WCGR +N+L +PIDG Sbjct: 71 LGEVVRVEPDLIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTVNSLCEPIDGLGP 130 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + +G I + PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL Sbjct: 131 IAEGLDRRSISNTAPPSMTRKRVEAGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 250 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 VTIAE+F KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G Sbjct: 251 VTIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA KAW+ D++KLVS L LIHRFEETRD+RLIGGYR G D LD AV QVPIIYD LK Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 430 Query: 419 QSPSDLSSEDVF 430 QSP D S D F Sbjct: 431 QSPGDRDSPDAF 442 >gi|15964410|ref|NP_384763.1| flagellum-specific ATP synthase [Sinorhizobium meliloti 1021] gi|307311552|ref|ZP_07591193.1| ATPase, FliI/YscN family [Sinorhizobium meliloti BL225C] gi|17380374|sp|O54249|FLII_RHIME RecName: Full=Flagellum-specific ATP synthase gi|15073587|emb|CAC45229.1| Flagellum-specific ATP synthase [Sinorhizobium meliloti 1021] gi|306899569|gb|EFN30198.1| ATPase, FliI/YscN family [Sinorhizobium meliloti BL225C] Length = 467 Score = 575 bits (1481), Expect = e-162, Method: Compositional matrix adjust. Identities = 276/437 (63%), Positives = 346/437 (79%), Gaps = 2/437 (0%) Query: 4 NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61 +L LA L E Y+ + GG++ +I+ +YTV+ LS++V LGDFV H+ +LG+ Sbjct: 14 SLAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGE 73 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121 V+R+ + V +CP+ G+ I + D+V G FRI+P+ WCGR INAL +PIDG +L + Sbjct: 74 VVRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQ 133 Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 GD+ I + PP+M R+RVE+GF+TG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM Sbjct: 134 GDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241 AR+D FDKV+I+LVGERGREVREFIED LGDNL KSV VVATSDESP+LRKMAPLTAVTI Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGDNLSKSVAVVATSDESPMLRKMAPLTAVTI 253 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AE++ KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPPV+PLAS+SRLA Sbjct: 314 EGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLA 373 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421 KAW+ D++KLV+ L LIHRFEETRD+RLIGGYRPG D LD A+ QVP+IYD LKQ P Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIKQVPVIYDVLKQMP 433 Query: 422 SDLSSEDVFQEITKKLQ 438 + + D F ++ L+ Sbjct: 434 GERPAFDAFTDLANALK 450 >gi|2916791|emb|CAA11957.1| flagellar export apparatus protein [Sinorhizobium meliloti] Length = 467 Score = 575 bits (1481), Expect = e-162, Method: Compositional matrix adjust. Identities = 276/437 (63%), Positives = 346/437 (79%), Gaps = 2/437 (0%) Query: 4 NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61 +L LA L E Y+ + GG++ +I+ +YTV+ LS++V LGDFV H+ +LG+ Sbjct: 14 SLAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSATGTHLGE 73 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121 V+R+ + V +CP+ G+ I + D+V G FRI+P+ WCGR INAL +PIDG +L + Sbjct: 74 VVRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQ 133 Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 GD+ I + PP+M R+RVE+GF+TG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM Sbjct: 134 GDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241 AR+D FDKV+I+LVGERGREVREFIED LGDNL KSV VVATSDESP+LRKMAPLTAVTI Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGDNLSKSVAVVATSDESPMLRKMAPLTAVTI 253 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AE++ KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPPV+PLAS+SRLA Sbjct: 314 EGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLA 373 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421 KAW+ D++KLV+ L LIHRFEETRD+RLIGGYRPG D LD A+ QVP+IYD LKQ P Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIKQVPVIYDVLKQMP 433 Query: 422 SDLSSEDVFQEITKKLQ 438 + + D F ++ L+ Sbjct: 434 GERPAFDAFTDLANALK 450 >gi|327193032|gb|EGE59944.1| H(+)-transporting ATP synthase, flagellum-specific protein [Rhizobium etli CNPAF512] Length = 464 Score = 573 bits (1478), Expect = e-161, Method: Compositional matrix adjust. Identities = 276/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%) Query: 1 MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 + L LA L + Y+ V GG + +I + +YTV LS++V LG+FV H+ + + Sbjct: 10 LSPTLAHLAGLVDQYASPDFAVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSASGVH 69 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 LG+V+R+ +++Y+CP+ GE I + D V G FRISPS WCGR IN+L +PIDG Sbjct: 70 LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTINSLCEPIDGQGP 129 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + +G I + PP+M RQRV GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL Sbjct: 130 IVEGLDRRSISNTAPPSMTRQRVGTGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 189 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA Sbjct: 190 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 249 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +TIAE+F KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G Sbjct: 250 ITIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 309 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S Sbjct: 310 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 369 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA KAW+ D++KLVS L LIHRFEETRD+RLIGGYR G D LD AV QVPIIYD LK Sbjct: 370 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 429 Query: 419 QSPSDLSSEDVF 430 Q+P D S D F Sbjct: 430 QAPGDRESVDAF 441 >gi|190890358|ref|YP_001976900.1| H(+)-transporting ATP synthase, flagellum-specific protein [Rhizobium etli CIAT 652] gi|190695637|gb|ACE89722.1| H(+)-transporting ATP synthase, flagellum-specific protein [Rhizobium etli CIAT 652] Length = 464 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 275/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%) Query: 1 MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 + L LA L + Y+ V GG + +I + +YTV LS++V LG+FV H+ + + Sbjct: 10 LSPTLAHLAGLVDQYASPDFAVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSASGVH 69 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 LG+V+R+ +++Y+CP+ GE I + D V G FRISPS WCGR +N+L +PIDG Sbjct: 70 LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTVNSLCEPIDGQGP 129 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + +G I + PP+M RQRV GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL Sbjct: 130 IVEGLDRRSISNTAPPSMTRQRVGTGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 189 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA Sbjct: 190 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 249 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +TIAE+F KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G Sbjct: 250 ITIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 309 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S Sbjct: 310 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 369 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA KAW+ D++KLVS L LIHRFEETRD+RLIGGYR G D LD AV QVPIIYD LK Sbjct: 370 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 429 Query: 419 QSPSDLSSEDVF 430 Q+P D S D F Sbjct: 430 QAPGDRESVDAF 441 >gi|307318907|ref|ZP_07598338.1| ATPase, FliI/YscN family [Sinorhizobium meliloti AK83] gi|306895321|gb|EFN26076.1| ATPase, FliI/YscN family [Sinorhizobium meliloti AK83] Length = 467 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 275/437 (62%), Positives = 345/437 (78%), Gaps = 2/437 (0%) Query: 4 NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61 +L LA L E Y+ + GG++ +I+ +YTV+ LS++V LGDFV H+ +LG+ Sbjct: 14 SLAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGE 73 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121 V+R+ + V +CP+ G+ I + D+V G FRI+P+ WCGR INAL +PIDG +L + Sbjct: 74 VVRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQ 133 Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 GD+ I + PP+M R+RVE+GF+TG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM Sbjct: 134 GDIRRSIANTAPPSMTRKRVEQGFRTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241 AR+D FDKV+I+LVGERGREVREFIED LG NL KSV VVATSDESP+LRKMAPLTAVTI Sbjct: 194 ARADAFDKVVIALVGERGREVREFIEDTLGANLSKSVAVVATSDESPMLRKMAPLTAVTI 253 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AE++ KGDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP Sbjct: 254 AEHYRDKGDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGA 313 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G ITA+IS+LVDGDNHNDP+ADS R ILDGHIVL+RSLAEEGRYPPV+PLAS+SRLA Sbjct: 314 EGAGTITAIISILVDGDNHNDPVADSARGILDGHIVLDRSLAEEGRYPPVNPLASISRLA 373 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421 KAW+ D++KLV+ L LIHRFEETRD+RLIGGYRPG D LD A+ QVP+IYD LKQ P Sbjct: 374 RKAWTPDQEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIKQVPVIYDVLKQMP 433 Query: 422 SDLSSEDVFQEITKKLQ 438 + + D F ++ L+ Sbjct: 434 GERPAFDAFTDLANALK 450 >gi|241203101|ref|YP_002974197.1| flagellum-specific ATP synthase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240856991|gb|ACS54658.1| ATPase, FliI/YscN family [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 466 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 273/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%) Query: 1 MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 + L LA L + Y+ V GG + +I + +YTV LS++V LG+FV H+ + Sbjct: 11 LSPKLAHLAGLVDRYASPEFAVAHGGRVQTIAAGHYTVHGLSRHVRLGEFVAHKSATGIH 70 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 LG+V+R+ +++Y+CP+ GE I + D V G FRI+P+ WCGR +N+L +PIDG Sbjct: 71 LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRIAPTDSWCGRTVNSLCEPIDGLGP 130 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + +G I + PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL Sbjct: 131 IAEGLDRRSISNTAPPSMTRKRVETGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 250 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 VTIAE+F KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G Sbjct: 251 VTIAEHFRDKGENVLFIIDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA KAW+ D++KLVS L LIHRFEETRD+R+IGGYR G D LD A+ QVPIIYD LK Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRMIGGYRQGADPDLDMAIKQVPIIYDVLK 430 Query: 419 QSPSDLSSEDVF 430 QSP D S D F Sbjct: 431 QSPGDRDSLDAF 442 >gi|86356307|ref|YP_468199.1| flagellum-specific ATP synthase [Rhizobium etli CFN 42] gi|86280409|gb|ABC89472.1| H(+)-transporting ATP synthase, flagellum-specific protein [Rhizobium etli CFN 42] Length = 465 Score = 572 bits (1473), Expect = e-161, Method: Compositional matrix adjust. Identities = 275/432 (63%), Positives = 333/432 (77%), Gaps = 2/432 (0%) Query: 1 MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 + L LA L + Y+ V GG + +I + +YTV LS++V LG+FV H+ + Sbjct: 11 LSPKLVHLAGLVDRYASPEFAVAHGGRVQTIAAGHYTVRGLSRHVRLGEFVAHKSATGIH 70 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 LG+V+R+ D++Y+CP+ GE I + D V G FRISPS WCGR +N+L +PIDG Sbjct: 71 LGEVVRVEPDLIYVCPIEPGEPIGIHDTVIRKGAFRISPSDSWCGRTVNSLCEPIDGLGP 130 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + G I + PP+M RQRV GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL Sbjct: 131 IAAGLDRRSISNTAPPSMTRQRVATGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 SM AR+D FDKV+I+LVGERGREVREFIED LG ++KK++ VVATSDESP+LRKMAPLTA Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSDMKKAIAVVATSDESPMLRKMAPLTA 250 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +TIAE+F KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G Sbjct: 251 ITIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA KAW+ D++KLVS L LIHRFEETRD+RLIGGYR G D LD AV QVPIIYD LK Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIGGYRQGADPDLDMAVKQVPIIYDVLK 430 Query: 419 QSPSDLSSEDVF 430 Q+P D S D F Sbjct: 431 QAPGDRESVDAF 442 >gi|116250477|ref|YP_766315.1| flagellum-specific ATP synthase [Rhizobium leguminosarum bv. viciae 3841] gi|115255125|emb|CAK06199.1| putative flagellum-specific ATP synthase [Rhizobium leguminosarum bv. viciae 3841] Length = 466 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 273/432 (63%), Positives = 335/432 (77%), Gaps = 2/432 (0%) Query: 1 MQKNLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 + L L+ L + Y+ V GG + +I + +YTV LS++V LG+FV H+ + Sbjct: 11 LSPKLAHLSDLVDRYASPEFAVAHGGRVQTIAAGHYTVHGLSRHVRLGEFVAHKSATGIH 70 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 LG+V+R+ +++Y+CP+ GE I + D V G FRISP+ WCGR +N+L +PIDG Sbjct: 71 LGEVVRVEPELIYVCPIEPGEPIGIHDTVIRKGAFRISPTDSWCGRTVNSLCEPIDGLGP 130 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + +G I + PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLL Sbjct: 131 ITEGLDRRSISNTAPPSMTRKRVETGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL 190 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 SM AR+D FDKV+I+LVGERGREVREFIED LG N+KK++ VVATSDESP+LRKMAPLTA Sbjct: 191 SMLARADAFDKVVIALVGERGREVREFIEDTLGSNMKKAIAVVATSDESPMLRKMAPLTA 250 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 VTIAE+F KG+NVL I+DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER G Sbjct: 251 VTIAEHFRDKGENVLFIVDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAG 310 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + G ITA+IS+LVDGDNHNDPIADS R ILDGHIVL RSLAEEGRYPP+DPLAS+S Sbjct: 311 PGPEGAGTITAIISILVDGDNHNDPIADSTRGILDGHIVLQRSLAEEGRYPPIDPLASIS 370 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA KAW+ D++KLVS L LIHRFEETRD+R+IGGYR G D LD A+ QVPIIYD LK Sbjct: 371 RLARKAWTPDQEKLVSRLKVLIHRFEETRDLRMIGGYRQGADPDLDMAIKQVPIIYDVLK 430 Query: 419 QSPSDLSSEDVF 430 QSP D S D F Sbjct: 431 QSPGDRDSLDAF 442 >gi|222147566|ref|YP_002548523.1| flagellum-specific ATP synthase [Agrobacterium vitis S4] gi|221734554|gb|ACM35517.1| flagellum-specific ATP synthase [Agrobacterium vitis S4] Length = 464 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 263/437 (60%), Positives = 342/437 (78%), Gaps = 2/437 (0%) Query: 4 NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61 L+ +A +A+ Y+ + V GG++ +I + +YTVT LS+++ LGDFV H+ +LG+ Sbjct: 14 QLDAMAAIAKRYATSDYSVAHGGHVRTIAAGHYTVTGLSRHLHLGDFVAHRSPTGIHLGE 73 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121 V+R+ D+ Y+CP+ GE I++GD V G FR++ WCGR +NALG PIDG + Sbjct: 74 VVRVEPDLAYVCPIEPGEPIAIGDTVIRKGAFRVAAQDSWCGRTLNALGDPIDGLGPVMP 133 Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 G + I + P +M R+RVE GF+TG++ +DIF+PLC GQR+G+FAGSG+GKSTLLSM Sbjct: 134 GLVRRSIANTAPSSMGRKRVETGFRTGVKAVDIFSPLCLGQRLGIFAGSGVGKSTLLSML 193 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241 A++D FDKV+I+LVGERGREVREFIED LGDN+ K+V +VATSDESP+LRKMAPLTA+T+ Sbjct: 194 AKADAFDKVVIALVGERGREVREFIEDTLGDNMAKTVAIVATSDESPMLRKMAPLTAITV 253 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AE+F +GDNVL I DSITRFAH+IRE+AT +GE P+ARG+P SVF+ELP+LLER GP E Sbjct: 254 AEHFRDQGDNVLFIADSITRFAHAIREVATAAGEPPIARGFPASVFTELPKLLERAGPGE 313 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G ITA+IS+LVDGDNHNDPIAD R ILDGHIVL+RSLAEEGRYPP++PLAS+SRLA Sbjct: 314 EGTGTITAIISILVDGDNHNDPIADCTRGILDGHIVLDRSLAEEGRYPPINPLASISRLA 373 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421 KAW+ D++KLVS L LIHRFEETRD+RLIGGYR G D LD A+ QVPI+Y+ LKQ+P Sbjct: 374 RKAWTPDQEKLVSRLKTLIHRFEETRDLRLIGGYRAGSDPDLDMAIKQVPILYEVLKQTP 433 Query: 422 SDLSSEDVFQEITKKLQ 438 SD + D + ++ L+ Sbjct: 434 SDRAVVDAYADLAHALK 450 >gi|150395480|ref|YP_001325947.1| flagellum-specific ATP synthase [Sinorhizobium medicae WSM419] gi|150026995|gb|ABR59112.1| ATPase, FliI/YscN family [Sinorhizobium medicae WSM419] Length = 467 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 269/430 (62%), Positives = 337/430 (78%), Gaps = 2/430 (0%) Query: 11 LAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68 L E Y+ + GG++ +I+ +YTV+ LS++V LGDFV H+ +LG+V+R+ + Sbjct: 21 LVERYANPEFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSATGTHLGEVVRVEPE 80 Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V +CP+ G+ I + D+V G FRI+P+ WCGR INAL +PID L +GD+ I Sbjct: 81 RVVVCPIEPGDPIGIHDIVIRKGAFRIAPTDKWCGRTINALAEPIDSLGVLLQGDVRRSI 140 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + PP+M R+RVE GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM AR+D FD Sbjct: 141 ANVAPPSMTRKRVEHGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLARADAFD 200 Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248 KV+I+LVGERGREVREFIED LG NL KSV VVATSDESP+LRKMAPLTAVTIAE++ + Sbjct: 201 KVVIALVGERGREVREFIEDTLGSNLSKSVAVVATSDESPMLRKMAPLTAVTIAEHYRDQ 260 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 GDNVLLI+DS+TRFAH+IRE+AT +GE P+ARGYP SVF+ELPRLLER GP + G IT Sbjct: 261 GDNVLLIVDSVTRFAHAIREVATAAGEPPIARGYPASVFTELPRLLERAGPGAEGTGTIT 320 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 A+IS+LVDGDNHNDP+ADS R ILDGHIVL RSLAEEGRYPPV+PL+S+SRLA KAW+ D Sbjct: 321 AIISILVDGDNHNDPVADSARGILDGHIVLERSLAEEGRYPPVNPLSSISRLARKAWTPD 380 Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 ++KLV+ L LIHRFEETRD+RLIGGYRPG D LD A+ QVP+IYD L Q+P + + D Sbjct: 381 QEKLVARLKSLIHRFEETRDLRLIGGYRPGGDADLDMAIRQVPVIYDVLMQTPGERPAFD 440 Query: 429 VFQEITKKLQ 438 F ++ L+ Sbjct: 441 AFTDLANALK 450 >gi|163758010|ref|ZP_02165098.1| flagellum-specific ATP synthase [Hoeflea phototrophica DFL-43] gi|162284299|gb|EDQ34582.1| flagellum-specific ATP synthase [Hoeflea phototrophica DFL-43] Length = 459 Score = 520 bits (1340), Expect = e-145, Method: Compositional matrix adjust. Identities = 246/438 (56%), Positives = 323/438 (73%), Gaps = 5/438 (1%) Query: 6 ETLAQLAEDYSKNLVVQGGY-----ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 + LA LA + + GGY ++ ++ + V LS++V +GDF+ + + L Sbjct: 5 QGLAVLAREVRRISRPHGGYDVSGIVTEVSPGHCVVAGLSRHVRIGDFISFRHDDGVKLA 64 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120 +V+ + D + CPV + ++G+ V+ G FR+SP WCGR INALG+P+DG L Sbjct: 65 EVVSLGPDQLIACPVDGAAQAAIGERVWRQGAFRLSPHHTWCGRTINALGEPVDGLGGLE 124 Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 G +S + P +M RQRV +TGIRV+D+FTP+C GQR+G+FAGSG+GKSTLLSM Sbjct: 125 HGTVSRPVTGAPPASMLRQRVNAPLRTGIRVVDVFTPICRGQRLGIFAGSGVGKSTLLSM 184 Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240 FA++ FD+ +I+LVGERGREVREFIED LG+N+KK+V VVATSDESP+LRK+APLTAVT Sbjct: 185 FAKAADFDRAVIALVGERGREVREFIEDTLGENMKKTVAVVATSDESPMLRKLAPLTAVT 244 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 +AE+F +G+NVLLI+DS+TRFAH++REI +GE PVARGYP SVF+ LP LLER GP Sbjct: 245 VAEHFRDQGENVLLIVDSLTRFAHALREIGMAAGEPPVARGYPASVFTALPGLLERAGPG 304 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 K G ITA++S+LVDGDNHNDP+ADS R ILDGH+VL+R+LA+EGRYPPV+PL S+SRL Sbjct: 305 PKGAGAITAIVSILVDGDNHNDPVADSARGILDGHLVLDRALADEGRYPPVNPLTSISRL 364 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 A KAW DE+KLV L LIHR+EETRD+RLIGGYRPG D LD A+ Q P+IYD L+Q+ Sbjct: 365 ARKAWRGDEEKLVMRLKALIHRYEETRDLRLIGGYRPGTDAELDMAIKQAPVIYDSLRQN 424 Query: 421 PSDLSSEDVFQEITKKLQ 438 P S D F E+ + ++ Sbjct: 425 PDQPPSADAFAELAEAMK 442 >gi|260466624|ref|ZP_05812812.1| ATPase, FliI/YscN family [Mesorhizobium opportunistum WSM2075] gi|259029630|gb|EEW30918.1| ATPase, FliI/YscN family [Mesorhizobium opportunistum WSM2075] Length = 466 Score = 494 bits (1273), Expect = e-138, Method: Compositional matrix adjust. Identities = 235/420 (55%), Positives = 312/420 (74%), Gaps = 1/420 (0%) Query: 19 LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78 LV +GG ++ +T +Y V LS + LGD V +G G++++I+ D V + P Sbjct: 39 LVKRGGLVTEVTPTHYKVRGLSDFARLGDIVEQRGLAGARRGEIVKISRDEVVVAPFERS 98 Query: 79 EEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138 + +GD VF G ++P W GR I+AL + IDG L +GD M + P AM R Sbjct: 99 ADAGIGDAVFRRGPLAVAPHGSWRGRTIDALTRAIDGGPPLVRGD-DMAASATTPGAMAR 157 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198 QRV F TG++VIDIFTPLC GQR+GVFAGSG+GKSTLL+M A +D FD V+++L+GER Sbjct: 158 QRVGTAFMTGVKVIDIFTPLCLGQRLGVFAGSGVGKSTLLAMLAGADAFDTVVVALIGER 217 Query: 199 GREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 GREVREF+ED +GD++ K+V VVATSDES ++R+ AP TA+ +AE+F +G VLL+LDS Sbjct: 218 GREVREFLEDTIGDSMAKTVAVVATSDESAMMRRRAPDTAMRVAEHFRDQGHRVLLVLDS 277 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 ITRFAH++RE+AT +GE PVARGYP SVF+ELP+LLER GP + KG+ITA+ISVLVDGD Sbjct: 278 ITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPGAEGKGSITAIISVLVDGD 337 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 +HNDP+ADSVR ILDGH+VL+R++AE+GRYPPV+PL+S+SRLA KAWS +++ LV+ L Sbjct: 338 DHNDPVADSVRGILDGHVVLDRAIAEQGRYPPVNPLSSISRLAGKAWSLEQRALVTRLKS 397 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +I RFE+TRDIRL+G Y+ GVD LD AV QVP+IY+ L QSP D S D F ++ + L+ Sbjct: 398 MISRFEDTRDIRLLGAYQGGVDAELDIAVRQVPLIYEALTQSPRDRPSTDPFSDLARHLK 457 >gi|13472571|ref|NP_104138.1| flagellum-specific ATP synthase [Mesorhizobium loti MAFF303099] gi|14023317|dbj|BAB49924.1| flagella-specific ATPase; FliI [Mesorhizobium loti MAFF303099] Length = 466 Score = 492 bits (1266), Expect = e-137, Method: Compositional matrix adjust. Identities = 232/423 (54%), Positives = 312/423 (73%), Gaps = 1/423 (0%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75 + LV +GG ++ +T +Y V LS + LGD V +G+ G++++I+ D V + P Sbjct: 36 TDGLVKRGGLVTEVTQTHYKVRGLSDFARLGDMVEQRGQAGSRRGEIVKISRDEVVVAPF 95 Query: 76 GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 + +GD VF G + P W GR I+AL + IDG L +G+ + + P A Sbjct: 96 ERSADAGIGDAVFRRGPLAVGPHNSWRGRTIDALTRAIDGGPPLIRGE-DLSGGATTPGA 154 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 M RQRV F TG++VIDIFTPLC GQR+GVFAGSG+GKSTLL+M A +D FD V+++L+ Sbjct: 155 MARQRVGTAFMTGVKVIDIFTPLCFGQRMGVFAGSGVGKSTLLAMLAGADAFDTVVVALI 214 Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 GERGREVREF+ED +GD++ K+V VVATSDES ++R+ AP TA+ +AE+F +G VLL+ Sbjct: 215 GERGREVREFLEDTIGDSMAKTVAVVATSDESAMMRRRAPDTAMRVAEHFRDQGHRVLLV 274 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 LDSITRFAH++RE+AT +GE PVARGYP SVF+ELP+LLER GP + KG+ITA+ISVLV Sbjct: 275 LDSITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPGAEGKGSITAIISVLV 334 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 DGD+HNDP+ADSVR ILDGH+VL+R++AE+GRYPPV+PL+S+SRLA KAWS +++ LV+ Sbjct: 335 DGDDHNDPVADSVRGILDGHVVLDRAIAEQGRYPPVNPLSSISRLAGKAWSVEQRALVTR 394 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 L +I RFE+TRDIRL+G Y+ G D LD AV QVP+IY+ L QSP D S D F ++ + Sbjct: 395 LKSMISRFEDTRDIRLLGAYQGGADAELDIAVRQVPLIYEALTQSPRDRPSADPFSDLAR 454 Query: 436 KLQ 438 L+ Sbjct: 455 HLK 457 >gi|319781686|ref|YP_004141162.1| ATPase, FliI/YscN family [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167574|gb|ADV11112.1| ATPase, FliI/YscN family [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 467 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 230/423 (54%), Positives = 309/423 (73%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75 ++ L+ +GG + +T +Y V LS + LGD V G G++++I D + P Sbjct: 36 AEALLKRGGRVIEVTPTHYKVHGLSSFARLGDIVEQPGHAGARRGEIVKIGRDEAVVAPF 95 Query: 76 GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 + +GD VF G ++P A W GR I+AL + IDG L +GD + P A Sbjct: 96 ERSADSGIGDAVFRRGPLVVAPHASWRGRTIDALTRAIDGGPPLARGDDTSRGAQTTPGA 155 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 M RQRV F TG++VIDIFTPLC GQR+G+FAGSG+GKSTLL+M A +D FD V+++L+ Sbjct: 156 MARQRVGTAFMTGVKVIDIFTPLCFGQRLGIFAGSGVGKSTLLAMLAGADAFDTVVVALI 215 Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 GERGREVREF+ED +GD++ K++ VVATSDES ++R+ AP TA+ +AE+F +G VLL+ Sbjct: 216 GERGREVREFLEDTIGDSMAKTIAVVATSDESAMMRRRAPDTAMRVAEHFRDQGHRVLLV 275 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 LDSITRFAH++RE+AT +GE PVARGYP SVF+ELP+LLER GP + KG+ITA+ISVLV Sbjct: 276 LDSITRFAHALREVATGTGEPPVARGYPASVFTELPKLLERAGPGTEGKGSITAIISVLV 335 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 DGD+HNDP+ADSVR ILDGH+VL+R++AE+GRYPPV+PL+S+SRLA KAWS +++ LV+ Sbjct: 336 DGDDHNDPVADSVRGILDGHVVLDRTIAEQGRYPPVNPLSSISRLAGKAWSVEQRALVTR 395 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 L +I RFE+TRDIRL+G Y+ GVD LD AV QVP+IY+ L Q P D S D F ++ + Sbjct: 396 LKSMISRFEDTRDIRLLGAYQGGVDAELDIAVRQVPLIYEALTQGPKDRPSADPFSDLAR 455 Query: 436 KLQ 438 L+ Sbjct: 456 HLK 458 >gi|110632661|ref|YP_672869.1| flagellum-specific ATP synthase [Mesorhizobium sp. BNC1] gi|110283645|gb|ABG61704.1| ATPase, FliI/YscN family [Chelativorans sp. BNC1] Length = 465 Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust. Identities = 231/424 (54%), Positives = 308/424 (72%), Gaps = 2/424 (0%) Query: 17 KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76 + +V GG IS +T +YY V LS+ LG + ++ S+ G+V+RI+ D V + P Sbjct: 34 QRMVRHGGRISEVTPMYYRVRGLSKTARLGQIISYRSHGSEYRGEVVRISEDDVIVAPFE 93 Query: 77 IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPA 135 E SLG VF G I P A W GRVI+AL + +D +L + M + P A Sbjct: 94 HSAEASLGQAVFATGTLEIRPHASWRGRVIDALARALDDGPALIRSAPQGPAAMPRTPAA 153 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 + RQRV + F TG+RV+D+F PLC GQRIG+FAGSG+GKSTLL+M AR++ FD V++++V Sbjct: 154 LRRQRVAEPFLTGVRVVDLFAPLCLGQRIGIFAGSGVGKSTLLAMLARAEAFDTVVVAMV 213 Query: 196 GERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREVREF+ED LG+ +KK+V VVATSDES ++R+ A TA+ +AE+F G+ VLL Sbjct: 214 GERGREVREFLEDTLGEAGMKKTVAVVATSDESAMMRRRAADTAMRVAEHFRDAGEKVLL 273 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +LDSITR+AH+ RE+AT +GE PVARGYP SVF++LPRLLER GP E G+ITAV SVL Sbjct: 274 LLDSITRYAHATREVATGAGEPPVARGYPASVFTDLPRLLERAGPGETGHGSITAVFSVL 333 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 VDGD+HNDP+AD VR ILDGH+VL+R++AE+GR+P V PLAS+SRLAD++W+ D K++V Sbjct: 334 VDGDDHNDPVADCVRGILDGHLVLDRAIAEQGRFPAVSPLASISRLADRSWTDDRKRVVQ 393 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434 L +I RFEETRDIRL+GG++ G+D LD AV QVP+IYD L+QSP D + D F ++ Sbjct: 394 RLKAMIARFEETRDIRLLGGFQAGLDPELDLAVRQVPLIYDILRQSPKDPPAMDPFADLA 453 Query: 435 KKLQ 438 L+ Sbjct: 454 AHLK 457 >gi|121602501|ref|YP_989404.1| flagellum-specific ATP synthase [Bartonella bacilliformis KC583] gi|120614678|gb|ABM45279.1| flagellum-specific ATP synthase [Bartonella bacilliformis KC583] Length = 537 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 226/425 (53%), Positives = 300/425 (70%) Query: 14 DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYIC 73 +YS + + QGG IS + T LSQ V LGD V + G++IR+N + V I Sbjct: 111 EYSSHSINQGGVISDVARGILTARGLSQSVFLGDTVCIECGTQTVRGEIIRVNEESVLIK 170 Query: 74 PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 P L VF G ++P A WCGRV+NA G+ IDG +L G M + + P Sbjct: 171 PYDETIVPVLKASVFPQGPLFVAPDASWCGRVVNAFGEAIDGKGALLLGSSPMAVEAHAP 230 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 PA+ R RV G +TG++VIDIFTPLC GQRIG+F+GSG+GKSTLLSM ++D FDKV+++ Sbjct: 231 PALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTLLSMMMQADHFDKVVLA 290 Query: 194 LVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253 L GERGREVR+ ++D L D L K V V+ATSDESP++R++AP+ A TIAEYFSS GDNVL Sbjct: 291 LTGERGREVRDMLDDTLQDKLDKVVAVIATSDESPMMRRLAPIMATTIAEYFSSLGDNVL 350 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 L++DSITR+A ++REIA ++ E PV+RG+P VFSELPRLLER GP K KG+IT V +V Sbjct: 351 LVVDSITRYALAVREIAISAHEPPVSRGFPPRVFSELPRLLERAGPGRKGKGSITGVYAV 410 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373 LVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD +S+SRLA +W+ +++ LV Sbjct: 411 LVDGDDHNDPIADAIRGILDGHIVLDRAIAAQGRFPAVDISSSISRLASHSWTGEQRILV 470 Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 SL +I R+EETRD+R +G YRPG D ILD+AVH VP IY + Q+ + + E+ Sbjct: 471 QSLKEMIFRYEETRDLRAMGAYRPGTDHILDQAVHLVPSIYAAMNQNIDTPLVRNPYDEL 530 Query: 434 TKKLQ 438 K L+ Sbjct: 531 AKLLK 535 >gi|182679723|ref|YP_001833869.1| flagellum-specific ATP synthase [Beijerinckia indica subsp. indica ATCC 9039] gi|182635606|gb|ACB96380.1| ATPase, FliI/YscN family [Beijerinckia indica subsp. indica ATCC 9039] Length = 442 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 223/437 (51%), Positives = 308/437 (70%), Gaps = 2/437 (0%) Query: 4 NLETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61 L+ L Q ++ ++ LV GG ++ +T + +V LS ++ LGD + S LG+ Sbjct: 3 TLDRLGQKLDNARRDIKLVRIGGTVTEVTPAFISVAGLSSFIKLGDCIKFGEDGSSALGE 62 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121 V+RI+ I I LGD + G F+I P W GRVINALG PIDG D+L Sbjct: 63 VVRIDQQNATIKIFDHASSIGLGDKAWRMGPFQICPDPSWKGRVINALGIPIDGGDALRL 122 Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 G+ S I + PPAM R RV K +TG+RVID+FTPLC GQRIG+FAGSG+GKSTLL M Sbjct: 123 GEESQSIHAAPPPAMRRARVTKPMRTGVRVIDLFTPLCAGQRIGIFAGSGVGKSTLLGML 182 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241 A S FD V+I LVGERGREVREF+++ L D+L +V +VAT DES ++R++AP TA+TI Sbjct: 183 AGSREFDTVVIGLVGERGREVREFLDEVLADHLANAVTIVATGDESSLMRRLAPNTAMTI 242 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AE+F +G+NVLLI+DS+TRFAH+ R++A +GE+ VARGY SVF++LP+LLER GP Sbjct: 243 AEFFRDRGENVLLIVDSVTRFAHAARDVALAAGEMAVARGYAPSVFTDLPKLLERAGPGL 302 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 G+IT + SVLVDGD+HN+PIAD++R LDGHIVL+R++A++GR+P V+ L S+SRLA Sbjct: 303 DGSGSITGIFSVLVDGDDHNEPIADTIRGTLDGHIVLDRAIADQGRFPAVNILRSISRLA 362 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421 W+ +++ LV + LI R+E+TRD+RL+GGY+PG D LD+A+ VP IY ++Q+P Sbjct: 363 QHVWTPEQQGLVLKIRGLIARYEDTRDLRLMGGYQPGSDGELDQAIALVPKIYQAMEQTP 422 Query: 422 SDLSSEDVFQEITKKLQ 438 +S+D F+E+ + LQ Sbjct: 423 KSPASQDAFRELAEILQ 439 >gi|319403956|emb|CBI77544.1| Flagellum-specific ATP synthase [Bartonella rochalimae ATCC BAA-1498] Length = 510 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 225/431 (52%), Positives = 299/431 (69%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 A+ D+ +LV QGG IS + LSQ V LGD V + ++ G++IR+N Sbjct: 78 FAKHKNDHYSHLVSQGGVISDVARGTLVARGLSQSVLLGDTVSVECESQFLRGEIIRVNE 137 Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 + V I P L VF G ++P WCGR++NA G+ IDG L G +M Sbjct: 138 ESVLIKPYDETVVPMLSASVFPKGPLFVAPDRSWCGRIVNAFGEAIDGKGGLSSGPRNMA 197 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I + PPA+ R RV G +TGI+VIDIFTPLC GQRIGVF+GSG+GKSTLLSM ++D F Sbjct: 198 IETYAPPALKRARVGAGLRTGIKVIDIFTPLCFGQRIGVFSGSGVGKSTLLSMMMQADHF 257 Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 D V+++L GERGREVR+ ++D L D L K + V+AT DESP++R++AP+ A TIAEYFSS Sbjct: 258 DTVVLALTGERGREVRDMLDDVLHDKLHKLIGVIATGDESPMMRRLAPIMATTIAEYFSS 317 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 GDNVLL++DS+TR+A + REIA + E PV+RG+P VFSELPRLLER GP + KG+I Sbjct: 318 LGDNVLLVVDSVTRYALATREIAITAHEPPVSRGFPPRVFSELPRLLERAGPGREGKGSI 377 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD L+S+SRLA W+ Sbjct: 378 TGVYAVLVDGDDHNDPIADTIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLASHNWTP 437 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 ++ LV +L +I R+EETRD+R +G YRPG D +LD+AV VP IY +KQSP Sbjct: 438 EQCTLVKNLKEMIFRYEETRDLRAMGAYRPGTDHVLDQAVFLVPSIYAAMKQSPDMALIS 497 Query: 428 DVFQEITKKLQ 438 D ++E+ K L+ Sbjct: 498 DPYEELAKLLK 508 >gi|319406972|emb|CBI80609.1| Flagellum-specific ATP synthase [Bartonella sp. 1-1C] Length = 510 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 225/431 (52%), Positives = 299/431 (69%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 A+ D+ +LV QGG IS + LSQ V LGD V + ++ G++IR+N Sbjct: 78 FAKHKNDHYSHLVSQGGVISDVARGTLVARGLSQSVLLGDTVSVECESQFLRGEIIRVNE 137 Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 + V I P L VF G ++P WCGR++NA G+ IDG L G +M Sbjct: 138 ESVLIKPYDETVVPMLSASVFPKGPLFVAPDRSWCGRIVNAFGEAIDGKGGLSSGPRNMA 197 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I + PPA+ R RV G +TGI+VIDIFTPLC GQRIGVF+GSG+GKSTLLSM ++D F Sbjct: 198 IETYAPPALKRARVGAGLRTGIKVIDIFTPLCFGQRIGVFSGSGVGKSTLLSMMMQADHF 257 Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 D V+++L GERGREVR+ ++D L D L K + V+AT DESP++R++AP+ A TIAEYFSS Sbjct: 258 DTVVLALTGERGREVRDMLDDVLHDKLHKLIGVIATGDESPMMRRLAPIMATTIAEYFSS 317 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 GDNVLL++DS+TR+A + REIA + E PV+RG+P VFSELPRLLER GP + KG+I Sbjct: 318 LGDNVLLVVDSVTRYALATREIAITAHEPPVSRGFPPRVFSELPRLLERAGPGREGKGSI 377 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD L+S+SRLA W+ Sbjct: 378 TGVYAVLVDGDDHNDPIADTIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLASHNWTP 437 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 ++ LV +L +I R+EETRD+R +G YRPG D +LD+AV VP IY +KQSP Sbjct: 438 EQCTLVKNLKEMIFRYEETRDLRAMGAYRPGTDHVLDQAVFLVPSIYAAMKQSPDMGLIS 497 Query: 428 DVFQEITKKLQ 438 D ++E+ K L+ Sbjct: 498 DPYEELAKLLK 508 >gi|217977820|ref|YP_002361967.1| flagellum-specific ATP synthase [Methylocella silvestris BL2] gi|217503196|gb|ACK50605.1| ATPase, FliI/YscN family [Methylocella silvestris BL2] Length = 449 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 224/429 (52%), Positives = 300/429 (69%), Gaps = 2/429 (0%) Query: 11 LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVH--QGKNSDNLGQVIRINLD 68 + + ++ LV G ++ ++ + V LS +V LG+ V + + + N G+V+RI+ Sbjct: 17 MTQAAAEPLVRVSGAVTELSPSHARVAGLSSFVKLGECVRFGPEAEGARNRGEVVRIDAQ 76 Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + G SLG+ VF G RI+P W GRV+NA G PIDG L +GD S I Sbjct: 77 GVIVKTFEAGALTSLGERVFRAGPLRIAPHPGWKGRVVNAFGAPIDGAGPLPQGDRSAMI 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P AM R RV +TG+RVIDIFTPLC GQRIG+FAGSG+GKSTLL+M A S FD Sbjct: 137 DAPPPSAMRRARVAWPLRTGVRVIDIFTPLCAGQRIGIFAGSGVGKSTLLAMLAGSKDFD 196 Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248 V+++LVGERGREVREF++D L N SV VVAT DE+P +R++AP TA+ IAE+F + Sbjct: 197 TVVVALVGERGREVREFLDDALAANRPISVAVVATGDETPSMRRLAPRTAMAIAEFFRDR 256 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 GD VLLI+DS+TRFAH+ R++A +GE PVARGY SVFS+LP+LLER GP E+ G+IT Sbjct: 257 GDRVLLIIDSVTRFAHAARDVALAAGEPPVARGYTPSVFSDLPKLLERAGPGEEGGGSIT 316 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 V SVLVDGD+HNDP+AD+VR LDGHIVL+R++A++GR+P V+ LAS+SRLA AW+A+ Sbjct: 317 GVFSVLVDGDDHNDPVADAVRGTLDGHIVLDRAIADQGRFPAVNVLASISRLAQIAWTAE 376 Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 ++ LV L +I RFE++ D+RL+GGY+ G D LD+AV P IY L+QSP S D Sbjct: 377 QRDLVVKLRGMIARFEDSSDLRLMGGYKAGQDADLDQAVALAPKIYKALQQSPQSTPSAD 436 Query: 429 VFQEITKKL 437 F+E+ + L Sbjct: 437 AFRELAQSL 445 >gi|158422270|ref|YP_001523562.1| flagellum-specific ATP synthase [Azorhizobium caulinodans ORS 571] gi|158329159|dbj|BAF86644.1| flagellum-specific ATP synthase [Azorhizobium caulinodans ORS 571] Length = 440 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 214/416 (51%), Positives = 296/416 (71%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 GG + +T Y+ V+ +S Y+ LGD V +G+V+R++ + P + Sbjct: 24 GGIVREVTPTYFRVSGISSYLRLGDRVGIDQDGRTRIGEVVRVDEAGAAVKPFDERVPVG 83 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 +G + F G +SP W GRVINALG P+DG+ L +G+ M + ++ PPAM RQR++ Sbjct: 84 MGSVAFRAGSLSLSPDRSWKGRVINALGVPLDGEGLLARGEHRMPMDAEPPPAMTRQRIQ 143 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 KG +TG+RVID+FTPLC GQR+G+FAGSG+GKSTLL+M ARS FD V++ LVGERGREV Sbjct: 144 KGIRTGVRVIDLFTPLCEGQRMGIFAGSGVGKSTLLAMLARSAVFDTVVVGLVGERGREV 203 Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 REF+E L N +SVVVV+TSDESP++R++AP +A+ +AEYF G++VLLI+DS+TR+ Sbjct: 204 REFLEGPLASNRHRSVVVVSTSDESPMMRRLAPQSALAVAEYFRDLGESVLLIIDSVTRY 263 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 AH+ R++A +GE VARGY SVFS LP+LLER GP + G ITAV SVLVDGD+HND Sbjct: 264 AHAARDVALAAGEPAVARGYAPSVFSTLPKLLERAGPGTEGAGCITAVFSVLVDGDDHND 323 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 P+AD++R LDGHIVL+R++A++GR+P V+ L S+SRLAD W+ +E+ LV L ++ R Sbjct: 324 PVADAIRGTLDGHIVLDRAIADQGRFPAVNVLGSISRLADHVWTPEERDLVRRLKSMVAR 383 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 FE+TRD+RL+GGY G D LD+AV VP IY+ L+Q S D F E+ + ++ Sbjct: 384 FEDTRDLRLMGGYHAGSDPELDQAVALVPKIYEALRQYSDSPPSLDPFGELAQAIR 439 >gi|90422599|ref|YP_530969.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisB18] gi|90104613|gb|ABD86650.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB18] Length = 443 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 223/433 (51%), Positives = 303/433 (69%), Gaps = 2/433 (0%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 +++ TL L +D V GG +S +T YY V LS+YV LG+ + N LG Sbjct: 4 LERLESTLVALRQDVPT--VRLGGVVSEVTPTYYRVAGLSRYVRLGELIGLDVDNQIQLG 61 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120 +V+RI+ V P LG + + +SP W GRV+NALG+P+D L Sbjct: 62 EVVRIDGTGVTAKPFDSHVAAGLGLVAYRLPPKTLSPHPSWKGRVVNALGEPLDDAGVLQ 121 Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 G+ M + PPAM+R RV+ TG+RV+D+FTPLC GQRIG+FAGSG+GK+TLLSM Sbjct: 122 AGERVMSTDANPPPAMSRTRVQAPLHTGVRVVDLFTPLCIGQRIGIFAGSGVGKTTLLSM 181 Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240 A+S FD V+ +LVGERGREVREF+E+ L + +++ VV+TSDESP++R++A TA T Sbjct: 182 LAQSSGFDTVVTALVGERGREVREFLEEALVHHRSRAITVVSTSDESPMMRRLAAKTATT 241 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 IAEYF +G++VLLI+DS+TRFAH+ RE+A +GE +ARGY SVFSELPRLLER GP Sbjct: 242 IAEYFRDRGESVLLIVDSVTRFAHAAREVALATGEPAIARGYAPSVFSELPRLLERSGPG 301 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 +G+IT + +VLVDGD+HN+P+AD+VRS LDGHIVL+R +A++GRYP ++ LASVSRL Sbjct: 302 LDGQGSITGIFAVLVDGDDHNEPVADTVRSTLDGHIVLDREVADQGRYPAINVLASVSRL 361 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 A WS +E+ LV L +I RFE+TRD+RL+GGY+PG D LD+AV VP IY+ ++Q+ Sbjct: 362 AQHVWSPEERNLVRKLRAMIARFEDTRDLRLMGGYQPGRDNELDQAVQLVPKIYEVMQQA 421 Query: 421 PSDLSSEDVFQEI 433 PSD + + FQE+ Sbjct: 422 PSDPACGEPFQEL 434 >gi|319898632|ref|YP_004158725.1| flagellum-specific ATP synthase [Bartonella clarridgeiae 73] gi|319402596|emb|CBI76141.1| Flagellum-specific ATP synthase [Bartonella clarridgeiae 73] Length = 514 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 223/431 (51%), Positives = 298/431 (69%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 A+ +DY LV QGG IS + LSQ V LGD V + + G++IR+N Sbjct: 80 FARRKDDYYSQLVSQGGIISDVARGTLVARGLSQSVLLGDTVSVECETQLLRGEIIRVNE 139 Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 + V I P L VF G ++P W GR++NA G+ IDG L G +M Sbjct: 140 ESVLIKPYDETIVPVLSASVFPKGPLFVAPDRSWRGRIVNAFGEAIDGKGILSSGSQNMA 199 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I + PPA+ R RV G +TG++VIDIFTPLC GQR+G+F+GSG+GKSTLLSM ++D F Sbjct: 200 IETYAPPALKRARVGAGLRTGVKVIDIFTPLCFGQRVGIFSGSGVGKSTLLSMMMQADHF 259 Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 D VI++L GERGREVR+ ++D L D L K V V+AT DESP++R +AP+ A TIAEYFSS Sbjct: 260 DTVILALTGERGREVRDMLDDTLQDKLHKLVGVIATGDESPMMRHLAPIMATTIAEYFSS 319 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 GDNVLL++DS+TR+A + REIA ++ E PV+RG+P VFSELPRLLER GP + KG+I Sbjct: 320 LGDNVLLVVDSVTRYALAAREIAISAHEPPVSRGFPPRVFSELPRLLERAGPGREGKGSI 379 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T V +VLVDGD+HNDPI+D++R ILDGHIVL+R++A +GR+P VD L+S+SRLA +W+ Sbjct: 380 TGVYAVLVDGDDHNDPISDAIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLASHSWTP 439 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 ++ LV +L +I R+EETRD+R +G YRPG D +LD+AV VP IY +KQSP Sbjct: 440 EQCTLVKNLKEMIFRYEETRDLRAMGAYRPGTDHVLDQAVFLVPSIYAAMKQSPDVPLIS 499 Query: 428 DVFQEITKKLQ 438 D ++E+ K L+ Sbjct: 500 DPYEELAKLLK 510 >gi|115523167|ref|YP_780078.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisA53] gi|115517114|gb|ABJ05098.1| ATPase, FliI/YscN family [Rhodopseudomonas palustris BisA53] Length = 443 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 222/427 (51%), Positives = 301/427 (70%), Gaps = 2/427 (0%) Query: 7 TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66 TLA L +D V GG +S + +Y V LS+ V LG+ + + N +G+VIRI+ Sbjct: 10 TLASLHKDVPT--VRLGGTVSEVAPTHYRVAGLSRLVKLGELIGLEVDNQMQIGEVIRID 67 Query: 67 LDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 + V P LG + + +SP W GRVINALG+P+DG L G+ M Sbjct: 68 GNGVTAKPFESHVAAGLGLIAYRLPPKTLSPHPSWKGRVINALGQPLDGAGVLLAGEREM 127 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + PPAM+R RV +TG+RVID+F+P+C GQRIG+FAGSG+GK+TLLSM A+S Sbjct: 128 STDANPPPAMSRARVRAPLQTGVRVIDLFSPICVGQRIGIFAGSGVGKTTLLSMMAQSAG 187 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 FD V+ +LVGERGREVREF+E+ L + ++V VV+TSDESP++R++A TA TIAEYF Sbjct: 188 FDTVVTALVGERGREVREFLEEALVHHKSRAVTVVSTSDESPMMRRLAAKTATTIAEYFR 247 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G++VLLI+DS+TRFAH+ RE+A +GE +ARGY SVFSE+PRLLER GP +G+ Sbjct: 248 DRGESVLLIVDSVTRFAHAAREVALATGEPAIARGYAPSVFSEIPRLLERSGPGIDGQGS 307 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT + +VLVDGD+HN+P+AD+VRS LDGHIVL+R +A++GRYP V+ L+SVSRLA WS Sbjct: 308 ITGIFAVLVDGDDHNEPVADTVRSTLDGHIVLDREVADQGRYPAVNVLSSVSRLAQHVWS 367 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 +E+ LV L +I RFE+TRD+RL+GGY+PG D LD+AV VP IY+ ++Q+PSD Sbjct: 368 PEERNLVRKLRAMIARFEDTRDLRLMGGYQPGRDSELDQAVQLVPKIYEVMQQAPSDPGC 427 Query: 427 EDVFQEI 433 + FQE+ Sbjct: 428 TEPFQEL 434 >gi|319409191|emb|CBI82835.1| Flagellum-specific ATP synthase [Bartonella schoenbuchensis R1] Length = 509 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 222/426 (52%), Positives = 297/426 (69%) Query: 13 EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYI 72 +D S LV QGG IS + LSQ V LGD V G++I +N + V I Sbjct: 82 DDPSSCLVNQGGVISDVARGTLVARGLSQSVLLGDTVCIDCDGQAVRGEIIHVNEENVLI 141 Query: 73 CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132 P L VF G ++P WCGRV+NALG+ IDG +L G +M + V Sbjct: 142 KPYDETVVPVLMASVFPKGPLFVAPDRSWCGRVVNALGEAIDGKGALLSGPRNMAVEGDV 201 Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 PPA+ R RV+KG +TG++VIDIFTPLC GQRIG+FAGSG+GKSTLLSM ++D FD V++ Sbjct: 202 PPALKRARVKKGLRTGVKVIDIFTPLCFGQRIGIFAGSGVGKSTLLSMMMQADHFDTVVL 261 Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252 +L GERGREVR+ ++D L + L K V V+AT DESP++R++AP+ A TIAEYFSS GDNV Sbjct: 262 ALTGERGREVRDMLDDTLHNKLDKVVAVIATGDESPMMRRLAPIMATTIAEYFSSLGDNV 321 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LL++DS+TR+A ++REIA ++ E PV+RG+P VFSELPRLLER G + KG+IT V + Sbjct: 322 LLVVDSVTRYALAMREIAISAHEPPVSRGFPPRVFSELPRLLERAGSGREGKGSITGVYA 381 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 VLVDGD+HNDPI+D++R ILDGHIVL+R++A +GR+P VD AS+SRLA +W+ +++ L Sbjct: 382 VLVDGDDHNDPISDAIRGILDGHIVLDRAIAAQGRFPAVDIPASISRLAPHSWTDEQRIL 441 Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 V +L +I R+EETRD+R +G YR G D +LD+A+ VP IY +KQSP D + E Sbjct: 442 VQNLKEMIFRYEETRDLRAMGAYRAGTDQVLDQAIFLVPSIYAAMKQSPDMPLVHDPYDE 501 Query: 433 ITKKLQ 438 + K L+ Sbjct: 502 LAKLLK 507 >gi|319405397|emb|CBI79016.1| Flagellum-specific ATP synthase [Bartonella sp. AR 15-3] Length = 509 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 218/431 (50%), Positives = 298/431 (69%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 A+ D+ +LV QGG IS + LSQ V LGD V + + G++IR+N Sbjct: 77 FAKRKNDHYSHLVSQGGVISDVARGTLVARGLSQSVLLGDTVCIECETQLLRGEIIRVNE 136 Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 + I P L VF G ++P WCGR++NA G+ IDG L G +M Sbjct: 137 ESALIKPYDETVVPILAASVFPKGPLFVAPDRSWCGRIVNAFGEAIDGKGVLSSGPRNMA 196 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I + PPA+ R RV G +TG++VIDIFTPLC GQRIG+F+GSG+GKSTLLSM ++D F Sbjct: 197 IEAYAPPALKRARVGAGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTLLSMMMQADHF 256 Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 D V+++L GERGREVR+ ++D + D L K + V+AT DESP++R++AP+ A TIAEYFSS Sbjct: 257 DTVVLALTGERGREVRDMLDDIVQDKLHKLIGVIATGDESPMMRRLAPIMATTIAEYFSS 316 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 GDNVLL++DSITR+A + REIA + E PV+RG+P VFSEL RLLER GP + KG+I Sbjct: 317 LGDNVLLVVDSITRYALAAREIAITAHEPPVSRGFPPRVFSELSRLLERAGPGRERKGSI 376 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD L+S+SRLA +W+ Sbjct: 377 TGVYAVLVDGDDHNDPIADTIRGILDGHIVLDRAIAAQGRFPAVDILSSISRLASHSWTP 436 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 ++ LV +L +I R+EETRD+R +G YRPG+D +LD+AV VP +Y +KQ+P Sbjct: 437 EQCTLVKNLKEMIFRYEETRDLRAMGAYRPGIDHVLDQAVFLVPSVYTAIKQNPDMPLII 496 Query: 428 DVFQEITKKLQ 438 D ++E+ + L+ Sbjct: 497 DPYEELARLLK 507 >gi|161511087|ref|NP_773525.2| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110] Length = 441 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 214/430 (49%), Positives = 294/430 (68%) Query: 9 AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68 A L S L G IS I ++ V+ LS++V LG+ + +G+V+RI+ + Sbjct: 10 ALLELQQSTPLASVSGAISEIAPTHFRVSGLSRFVRLGELIGVNSGGKPQIGEVVRIDSE 69 Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 + P LG + + +P W GRVINALG P+DG L G ++ Sbjct: 70 GIIAKPFDRQFAGGLGSVAYRMPPLSFAPDPSWKGRVINALGAPLDGQGPLTPGSRAVSA 129 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 ++ P AM R RV K +TG+RVID+F P+C GQR+G+FAGSG+GKSTLL+M ARS FD Sbjct: 130 EAEAPSAMKRARVHKPLRTGVRVIDLFAPICAGQRVGIFAGSGVGKSTLLAMLARSQGFD 189 Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248 V+++LVGERGREVREFIED LG N ++V +V+T DESP++R++AP TA+ +AEYF + Sbjct: 190 TVVLALVGERGREVREFIEDVLGANRNRAVTIVSTGDESPMMRRLAPKTAMAVAEYFRDR 249 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 G++VLL++DSITRFAH+ RE+A +GE VARGY +VF++LPRLLER GP E+ G IT Sbjct: 250 GESVLLVVDSITRFAHAAREVALAAGEPAVARGYAPTVFTDLPRLLERAGPGEEGSGTIT 309 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 + SVLVDGD+HN+PIAD++RS LDGHIVL+R +A++ RYP VD LASVSRLA W + Sbjct: 310 GIFSVLVDGDDHNEPIADTIRSTLDGHIVLSRHIADQARYPAVDVLASVSRLAHNVWDPE 369 Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 E++LVS L +I ++E+TRD+RL+GGY+ G D LD+A+ VP IY ++Q S S D Sbjct: 370 ERELVSKLRTMIAKYEDTRDLRLMGGYQSGRDSGLDQAIDLVPRIYSAMRQDASAQPSAD 429 Query: 429 VFQEITKKLQ 438 F+E+ L+ Sbjct: 430 PFRELRDMLK 439 >gi|90418401|ref|ZP_01226313.1| flagellum-specific ATP synthase FliI [Aurantimonas manganoxydans SI85-9A1] gi|90338073|gb|EAS51724.1| flagellum-specific ATP synthase FliI [Aurantimonas manganoxydans SI85-9A1] Length = 457 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 210/415 (50%), Positives = 291/415 (70%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G+I ++ + V LS +V LGD + G + D +G+V+RI + + P + Sbjct: 23 GHIIDVSPQAFRVAGLSPFVRLGDRIACPGDDGDAIGEVVRIEQASLTVKPFANRFVRGV 82 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 G F +SPS W GRV++A G+P DG + +GD + PAM R R K Sbjct: 83 KAPARQIGPFMVSPSRSWKGRVLDAFGQPTDGKGPVSEGDDPRRADAPPLPAMQRGRTGK 142 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 TG+R +DIFTPL GQRIG+FAGSG+GKSTL+SM AR+ FD V+++LVGERGREVR Sbjct: 143 PVATGVRALDIFTPLVRGQRIGIFAGSGVGKSTLMSMLARAKGFDTVVVALVGERGREVR 202 Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 EF+E+ + NL K V +VAT DESP++R++AP TA ++AEYF +GD+VLLI+DS+TR A Sbjct: 203 EFLEETMAGNLAKVVTIVATGDESPMMRRLAPRTATSVAEYFRDRGDSVLLIVDSVTRLA 262 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 H+ R++A +GE PVARGYP SVFSELP+LLER GP + G+IT + SVLVDGD+HNDP Sbjct: 263 HAARDVALAAGEPPVARGYPPSVFSELPQLLERAGPGLEGSGSITGIFSVLVDGDDHNDP 322 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383 IAD++R LDGHIVL+R++AE+GR+P VD L S+SRLAD+AW+ E++LVS L +I R+ Sbjct: 323 IADAIRGTLDGHIVLDRAIAEQGRFPAVDVLKSISRLADRAWNPQERELVSRLRSMISRY 382 Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 E+TRD+RL+GGY+ G D LD+AV VP +Y+ L Q P + + F++++ +L+ Sbjct: 383 EDTRDLRLLGGYQRGSDQTLDQAVDLVPHVYEHLVQHPEEGPCKQPFEDLSARLK 437 >gi|153011529|ref|YP_001372743.1| flagellum-specific ATP synthase [Ochrobactrum anthropi ATCC 49188] gi|151563417|gb|ABS16914.1| ATPase, FliI/YscN family [Ochrobactrum anthropi ATCC 49188] Length = 452 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 223/438 (50%), Positives = 294/438 (67%), Gaps = 4/438 (0%) Query: 5 LETLAQLAEDYS---KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQ 61 L LA A S K L GG +S ++ V LS+ LGD V + +L + Sbjct: 7 LSRLAAFARQQSVAPKPLTGIGGTVSDVSRSAIAVRGLSRDAHLGDAVAIHAQGGQSLAE 66 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121 +IR+ V + P SLG VF G RI P+ W GRVINALG+ +DG +L Sbjct: 67 IIRVADTQVLVKPFDDRIIPSLGAAVFEEGPMRIRPALEWRGRVINALGEAVDGKGALQP 126 Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 G M S P A+ R RV++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M Sbjct: 127 GTRPMASESLAPAALRRGRVDRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMM 186 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241 R+ FD V+++L GERGREVRE +E+ + +L K++ VVAT DESP++R++AP TA I Sbjct: 187 TRAADFDTVVLALTGERGREVREMLEETMAGHLDKTITVVATGDESPMMRRLAPNTATAI 246 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AEYF G NVLLI+DS+TRFAH+ RE+A + E PV+RGYP SVFS+LPRLLER GP Sbjct: 247 AEYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPPVSRGYPPSVFSQLPRLLERAGPGI 306 Query: 302 KEK-GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 E G+IT + SVLVDGD+HNDP++D++R LDGHIVL+R++A +GR+P VD SVSRL Sbjct: 307 TEAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPGSVSRL 366 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 A W+ +++KLVS L ++ RFEETRD+R IG Y+ G D +LD+AV VP IYD L+QS Sbjct: 367 AKHNWTPEQRKLVSQLRGMVARFEETRDLRAIGAYQKGHDGLLDQAVDLVPRIYDALQQS 426 Query: 421 PSDLSSEDVFQEITKKLQ 438 P S+D + ++ L+ Sbjct: 427 PETGLSDDPYNDLAAALR 444 >gi|328545465|ref|YP_004305574.1| H(+)-transporting ATP synthase, flagellum-specific protein [polymorphum gilvum SL003B-26A1] gi|326415206|gb|ADZ72269.1| H(+)-transporting ATP synthase, flagellum-specific protein [Polymorphum gilvum SL003B-26A1] Length = 440 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 217/415 (52%), Positives = 286/415 (68%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 GG ++ +T + LS+ VCLGD VV GK + ++IR++ V + P +I+ Sbjct: 24 GGRVTQVTPGSVRICGLSRSVCLGDLVVLSGKGGERRSEIIRLDEQDVLVKPFDSHVDIA 83 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 +G F G I P W GRVI+ALG P D L G +M P + R R+ Sbjct: 84 IGARAFRKGSLTIHPHESWKGRVIDALGHPADDRGVLRPGPAAMLPDCDPPATLERARIR 143 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 K +TG+RVID+FTPLC GQRIG+FAGSG+GKSTLL+M A S FD V++ LVGERGREV Sbjct: 144 KPVRTGVRVIDLFTPLCVGQRIGIFAGSGVGKSTLLAMLAGSGDFDTVVVGLVGERGREV 203 Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 REF+ED LG+ ++SVVVVAT +ES ++R++AP TA+ +AEYF G +VLLI+DS TRF Sbjct: 204 REFVEDVLGEARERSVVVVATGNESAMMRRLAPKTAMGVAEYFRDLGQSVLLIIDSATRF 263 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 AH+ R++A +GE PVARGY SVFS+L RLLER GP + KG IT + SVLVDGD+HND Sbjct: 264 AHAARDVAMAAGEPPVARGYTPSVFSDLTRLLERAGPGGEGKGAITGIFSVLVDGDDHND 323 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 P+AD++R +LDGHIVL+RS+A+ GRYP VD L SVSRL+ AWSA+E++L+ L +I R Sbjct: 324 PVADTLRGVLDGHIVLDRSIADAGRYPAVDVLKSVSRLSQHAWSAEERELILRLKAMISR 383 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 FE+TRD+RL+GGY+PG D LDKA VP IY+ L+Q D F ++ + L Sbjct: 384 FEDTRDLRLMGGYQPGSDPALDKACTLVPRIYEALRQDARSAQVGDPFADLARAL 438 >gi|254699440|ref|ZP_05161268.1| flagellum-specific ATP synthase [Brucella suis bv. 5 str. 513] gi|256014919|ref|YP_003104928.1| flagellum-specific ATP synthase FliI [Brucella microti CCM 4915] gi|256059628|ref|ZP_05449825.1| flagellum-specific ATP synthase [Brucella neotomae 5K33] gi|256111962|ref|ZP_05452913.1| flagellum-specific ATP synthase [Brucella melitensis bv. 3 str. Ether] gi|261323598|ref|ZP_05962795.1| flagellum-specific ATP synthase [Brucella neotomae 5K33] gi|261749891|ref|ZP_05993600.1| flagellum-specific ATP synthase [Brucella suis bv. 5 str. 513] gi|265993411|ref|ZP_06105968.1| flagellum-specific ATP synthase [Brucella melitensis bv. 3 str. Ether] gi|255997579|gb|ACU49266.1| flagellum-specific ATP synthase FliI [Brucella microti CCM 4915] gi|261299578|gb|EEY03075.1| flagellum-specific ATP synthase [Brucella neotomae 5K33] gi|261739644|gb|EEY27570.1| flagellum-specific ATP synthase [Brucella suis bv. 5 str. 513] gi|262764281|gb|EEZ10313.1| flagellum-specific ATP synthase [Brucella melitensis bv. 3 str. Ether] Length = 453 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 218/418 (52%), Positives = 289/418 (69%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|163844324|ref|YP_001621979.1| flagellum-specific ATP synthase [Brucella suis ATCC 23445] gi|163675047|gb|ABY39157.1| ATPase FliI/YscN family [Brucella suis ATCC 23445] Length = 453 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 218/418 (52%), Positives = 289/418 (69%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-KGNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEGGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|300024617|ref|YP_003757228.1| ATPase, FliI/YscN family [Hyphomicrobium denitrificans ATCC 51888] gi|299526438|gb|ADJ24907.1| ATPase, FliI/YscN family [Hyphomicrobium denitrificans ATCC 51888] Length = 456 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 215/415 (51%), Positives = 282/415 (67%), Gaps = 1/415 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G ++ I+ Y VT LS++V +GD V G L +V I ++ + P I L Sbjct: 31 GRVARISPTYIVVTGLSKFVSIGDAVSIAGIGGSVLAEVASIEAQVINVTPFIADHRIEL 90 Query: 84 GDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G V G+ +SP W GR +NALG PID L GD ++ I P AM R R+ Sbjct: 91 GASVTALSGQLTLSPHESWLGRTLNALGHPIDDQGPLIAGDRAVPIQGSPPAAMRRSRLG 150 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + KTG++ ID+FTP+C GQRIG+FAGSG+GKSTLL+M +R+ D +++LVGER REV Sbjct: 151 EQLKTGVKAIDLFTPICAGQRIGIFAGSGVGKSTLLAMLSRAPSSDVTVLALVGERSREV 210 Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 R+F++D L + + V VVATSDESP++R++AP A+ IAEY+ +G NVLLI+DS+TR+ Sbjct: 211 RDFLDDTLSASRDRVVSVVATSDESPMMRRLAPAAAMCIAEYYRDQGKNVLLIIDSLTRY 270 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 AH++RE+A S E PVARGYP SVFS LPRLLER G E+ G ITAV+SVLVDGD+HND Sbjct: 271 AHAMRELALASDEPPVARGYPPSVFSALPRLLERAGTGEEGAGTITAVLSVLVDGDDHND 330 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 PIAD+ R ILDGHIVL RS+A +GR P VDPLAS+SRLA K + + + + L I R Sbjct: 331 PIADAARGILDGHIVLERSIASQGRLPAVDPLASLSRLAPKIRTKQQSQFTTQLIESISR 390 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 FE+TRD+R IGGYRPG DL LD+A+ VP +YD LKQ ++ EDVF + + L Sbjct: 391 FEDTRDLRAIGGYRPGSDLTLDRALETVPRVYDALKQDLNETPVEDVFAFLAQTL 445 >gi|254559267|ref|YP_003066362.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4] gi|254266545|emb|CAX22309.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4] Length = 442 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 212/441 (48%), Positives = 297/441 (67%), Gaps = 3/441 (0%) Query: 1 MQKN-LETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD 57 M +N +E L Q E ++L V G + +T+ V +S +V LGD + Sbjct: 1 MTRNAIERLEQAMEAGRRDLPLVRIAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRT 60 Query: 58 NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 +G+V+RI+ + P E +G L G ++ P W GRVI+ALG+P+DG Sbjct: 61 QVGEVVRIDAAGATVKPFESRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLG 120 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L +G S+ + + P AM R RV+ TG+R ID+FTPLC GQRIG+FAGSG+GKSTL Sbjct: 121 PLAEGPASVPLDADPPAAMTRARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTL 180 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237 L+M A + FD V+++LVGERGREVREF+E + ++V+VV+T DESP++R+ AP Sbjct: 181 LAMLAGAQGFDSVVVALVGERGREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKV 240 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A+ +AE F +G++VLLI+DS+TR+AH+ R++A +GE VARGYP SVFS+LPRLLER Sbjct: 241 ALAVAESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERA 300 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 GP + G IT + SVLVDGD+HNDP+ADS+R LDGH+VL+R++AE+GRYP ++ L S+ Sbjct: 301 GPGAEGTGTITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSI 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SRLA + W+ D+++LV L ++ RFEETRD+RL+GGYR G D LD+AV VP IY+ L Sbjct: 361 SRLAGEVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEAL 420 Query: 418 KQSPSDLSSEDVFQEITKKLQ 438 +Q P S D F E+ + L+ Sbjct: 421 RQEPGQPPSRDAFLELAQSLR 441 >gi|161620215|ref|YP_001594101.1| flagellum-specific ATP synthase [Brucella canis ATCC 23365] gi|254702557|ref|ZP_05164385.1| flagellum-specific ATP synthase [Brucella suis bv. 3 str. 686] gi|260568535|ref|ZP_05839004.1| flagellum-specific ATP synthase [Brucella suis bv. 4 str. 40] gi|261753135|ref|ZP_05996844.1| flagellum-specific ATP synthase [Brucella suis bv. 3 str. 686] gi|161337026|gb|ABX63330.1| ATPase FliI/YscN family [Brucella canis ATCC 23365] gi|260155200|gb|EEW90281.1| flagellum-specific ATP synthase [Brucella suis bv. 4 str. 40] gi|261742888|gb|EEY30814.1| flagellum-specific ATP synthase [Brucella suis bv. 3 str. 686] Length = 453 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 218/418 (52%), Positives = 289/418 (69%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKLGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|218528726|ref|YP_002419542.1| flagellum-specific ATP synthase [Methylobacterium chloromethanicum CM4] gi|218521029|gb|ACK81614.1| ATPase, FliI/YscN family [Methylobacterium chloromethanicum CM4] Length = 442 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 210/436 (48%), Positives = 294/436 (67%), Gaps = 2/436 (0%) Query: 5 LETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62 +E L Q E ++L V G + +T+ V +S +V LGD + +G+V Sbjct: 6 IERLEQAMEAGRRDLPLVRVAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQVGEV 65 Query: 63 IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122 +RI+ + P E +G L G ++ P W GRVI+ALG+P+DG L +G Sbjct: 66 VRIDAAGATVKPFESRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPLAEG 125 Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 S+ + + P AM R RV+ TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M A Sbjct: 126 PASVPLDADPPAAMTRARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAMLA 185 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242 + FD V+++LVGERGREVREF+E + ++V+VV+T DESP++R+ AP A+ +A Sbjct: 186 GAQGFDSVVVALVGERGREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKVALAVA 245 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E F +G++VLLI+DS+TR+AH+ R++A +GE VARGYP SVFS+LPRLLER GP + Sbjct: 246 ESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPGAE 305 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 G IT + SVLVDGD+HNDP+ADS+R LDGH+VL+R++AE+GRYP ++ L S+SRLA Sbjct: 306 GTGTITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRLAG 365 Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422 + W+ D+++LV L ++ RFEETRD+RL+GGYR G D LD+AV VP IY+ L+Q P Sbjct: 366 EVWTGDQRELVRKLKSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQEPG 425 Query: 423 DLSSEDVFQEITKKLQ 438 S D F E+ + L+ Sbjct: 426 QPPSRDAFLELAQSLR 441 >gi|188579924|ref|YP_001923369.1| flagellum-specific ATP synthase [Methylobacterium populi BJ001] gi|179343422|gb|ACB78834.1| ATPase, FliI/YscN family [Methylobacterium populi BJ001] Length = 442 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/422 (49%), Positives = 291/422 (68%) Query: 17 KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76 + LV GG + +T+ V +S +V LGD + +G+V+RI+ + P Sbjct: 20 RPLVRVGGPVREVTASAARVAGVSAFVRLGDRMGFSADGRVQVGEVVRIDSAGATVKPFE 79 Query: 77 IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E +G L G ++ P W GRVI+ALG+P+DG L +G S+ + + P AM Sbjct: 80 SRIEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPLAEGPDSVPLDADPPAAM 139 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R RV TG+R +D+FTPLC GQRIG+FAGSG+GKSTLL+M A ++ FD V+++LVG Sbjct: 140 TRARVRTPLPTGVRAVDLFTPLCAGQRIGIFAGSGVGKSTLLAMLAGAEGFDSVVVALVG 199 Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 ERGREVREF+E + + +++V+VV+T DESP++R+ AP A+ +AE F +G++VLLI+ Sbjct: 200 ERGREVREFLEGPIAASRERAVIVVSTGDESPMMRRQAPKVALAVAECFRDRGESVLLIV 259 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TR+AH+ R++A +GE VARGYP SVFS+LPRLLER GP + G IT + SVLVD Sbjct: 260 DSVTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPGAEGSGTITGIFSVLVD 319 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 GD+HNDP+ADS+R LDGH+VL+R++AE+GRYP +D L S+SRLA + W+ D+++LV L Sbjct: 320 GDDHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIDLLGSISRLAGEVWTGDQRELVRKL 379 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436 ++ RFEETRD+RL+GGYR G D LD+AV VP IY+ L+Q P S D F E+ + Sbjct: 380 KSMMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQEPGQPPSRDAFLELAQS 439 Query: 437 LQ 438 L+ Sbjct: 440 LR 441 >gi|306846297|ref|ZP_07478858.1| ATPase FliI/YscN family [Brucella sp. BO1] gi|306273292|gb|EFM55161.1| ATPase FliI/YscN family [Brucella sp. BO1] Length = 453 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 217/418 (51%), Positives = 288/418 (68%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD SVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPVSVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|225628604|ref|ZP_03786638.1| ATPase FliI/YscN family protein [Brucella ceti str. Cudo] gi|254711395|ref|ZP_05173206.1| flagellum-specific ATP synthase [Brucella pinnipedialis B2/94] gi|254711994|ref|ZP_05173805.1| flagellum-specific ATP synthase [Brucella ceti M644/93/1] gi|254715064|ref|ZP_05176875.1| flagellum-specific ATP synthase [Brucella ceti M13/05/1] gi|256029975|ref|ZP_05443589.1| flagellum-specific ATP synthase [Brucella pinnipedialis M292/94/1] gi|256158140|ref|ZP_05456056.1| flagellum-specific ATP synthase [Brucella ceti M490/95/1] gi|256252909|ref|ZP_05458445.1| flagellum-specific ATP synthase [Brucella ceti B1/94] gi|261216771|ref|ZP_05931052.1| flagellum-specific ATP synthase [Brucella ceti M13/05/1] gi|261219998|ref|ZP_05934279.1| flagellum-specific ATP synthase [Brucella ceti B1/94] gi|261319001|ref|ZP_05958198.1| flagellum-specific ATP synthase [Brucella pinnipedialis B2/94] gi|261319638|ref|ZP_05958835.1| flagellum-specific ATP synthase [Brucella ceti M644/93/1] gi|265986996|ref|ZP_06099553.1| flagellum-specific ATP synthase [Brucella pinnipedialis M292/94/1] gi|265996657|ref|ZP_06109214.1| flagellum-specific ATP synthase [Brucella ceti M490/95/1] gi|225616450|gb|EEH13498.1| ATPase FliI/YscN family protein [Brucella ceti str. Cudo] gi|260918582|gb|EEX85235.1| flagellum-specific ATP synthase [Brucella ceti B1/94] gi|260921860|gb|EEX88428.1| flagellum-specific ATP synthase [Brucella ceti M13/05/1] gi|261292328|gb|EEX95824.1| flagellum-specific ATP synthase [Brucella ceti M644/93/1] gi|261298224|gb|EEY01721.1| flagellum-specific ATP synthase [Brucella pinnipedialis B2/94] gi|262550954|gb|EEZ07115.1| flagellum-specific ATP synthase [Brucella ceti M490/95/1] gi|264659193|gb|EEZ29454.1| flagellum-specific ATP synthase [Brucella pinnipedialis M292/94/1] Length = 453 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 217/418 (51%), Positives = 289/418 (69%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFE+TRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEKTRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|256043053|ref|ZP_05445998.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str. Rev.1] gi|260564284|ref|ZP_05834769.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str. 16M] gi|265989490|ref|ZP_06102047.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str. Rev.1] gi|260151927|gb|EEW87020.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str. 16M] gi|263000159|gb|EEZ12849.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str. Rev.1] Length = 453 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/418 (51%), Positives = 288/418 (68%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQR G+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRTGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|225685990|ref|YP_002733962.1| flagellum-specific ATP synthase [Brucella melitensis ATCC 23457] gi|256262884|ref|ZP_05465416.1| flagellum-specific ATP synthase [Brucella melitensis bv. 2 str. 63/9] gi|225642095|gb|ACO02008.1| ATPase FliI/YscN family protein [Brucella melitensis ATCC 23457] gi|263092721|gb|EEZ16930.1| flagellum-specific ATP synthase [Brucella melitensis bv. 2 str. 63/9] gi|326410316|gb|ADZ67380.1| flagellum-specific ATP synthase [Brucella melitensis M28] gi|326553609|gb|ADZ88248.1| flagellum-specific ATP synthase [Brucella melitensis M5-90] Length = 453 Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/418 (51%), Positives = 289/418 (69%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL++ R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAIMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|294853153|ref|ZP_06793825.1| flagellar protein export ATPase FliI [Brucella sp. NVSL 07-0026] gi|294818808|gb|EFG35808.1| flagellar protein export ATPase FliI [Brucella sp. NVSL 07-0026] Length = 453 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/418 (51%), Positives = 289/418 (69%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDG+IVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGYIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|62317081|ref|YP_222934.1| flagellum-specific ATP synthase [Brucella abortus bv. 1 str. 9-941] gi|83269074|ref|YP_418365.1| flagellum-specific ATP synthase [Brucella melitensis biovar Abortus 2308] gi|189022348|ref|YP_001932089.1| flagellum-specific ATP synthase [Brucella abortus S19] gi|237816643|ref|ZP_04595635.1| ATPase FliI/YscN family [Brucella abortus str. 2308 A] gi|254691430|ref|ZP_05154684.1| flagellum-specific ATP synthase [Brucella abortus bv. 6 str. 870] gi|254695271|ref|ZP_05157099.1| flagellum-specific ATP synthase [Brucella abortus bv. 3 str. Tulya] gi|254698370|ref|ZP_05160198.1| flagellum-specific ATP synthase [Brucella abortus bv. 2 str. 86/8/59] gi|254731815|ref|ZP_05190393.1| flagellum-specific ATP synthase [Brucella abortus bv. 4 str. 292] gi|256256616|ref|ZP_05462152.1| flagellum-specific ATP synthase [Brucella abortus bv. 9 str. C68] gi|260544322|ref|ZP_05820143.1| flagellum-specific ATP synthase [Brucella abortus NCTC 8038] gi|260757048|ref|ZP_05869396.1| flagellum-specific ATP synthase [Brucella abortus bv. 6 str. 870] gi|260759581|ref|ZP_05871929.1| flagellum-specific ATP synthase [Brucella abortus bv. 4 str. 292] gi|260762825|ref|ZP_05875157.1| flagellum-specific ATP synthase [Brucella abortus bv. 2 str. 86/8/59] gi|260882858|ref|ZP_05894472.1| flagellum-specific ATP synthase [Brucella abortus bv. 9 str. C68] gi|261215637|ref|ZP_05929918.1| flagellum-specific ATP synthase [Brucella abortus bv. 3 str. Tulya] gi|297249973|ref|ZP_06933674.1| flagellar protein export ATPase FliI [Brucella abortus bv. 5 str. B3196] gi|62197274|gb|AAX75573.1| flagellum-specific ATP synthase FliI [Brucella abortus bv. 1 str. 9-941] gi|82939348|emb|CAJ12295.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region:Disease resistance protein:ATP/GTP-binding site motif A [Brucella melitensis biovar Abortus 2308] gi|189020922|gb|ACD73643.1| flagellum-specific ATP synthase [Brucella abortus S19] gi|237787456|gb|EEP61672.1| ATPase FliI/YscN family [Brucella abortus str. 2308 A] gi|260097593|gb|EEW81467.1| flagellum-specific ATP synthase [Brucella abortus NCTC 8038] gi|260669899|gb|EEX56839.1| flagellum-specific ATP synthase [Brucella abortus bv. 4 str. 292] gi|260673246|gb|EEX60067.1| flagellum-specific ATP synthase [Brucella abortus bv. 2 str. 86/8/59] gi|260677156|gb|EEX63977.1| flagellum-specific ATP synthase [Brucella abortus bv. 6 str. 870] gi|260872386|gb|EEX79455.1| flagellum-specific ATP synthase [Brucella abortus bv. 9 str. C68] gi|260917244|gb|EEX84105.1| flagellum-specific ATP synthase [Brucella abortus bv. 3 str. Tulya] gi|297173842|gb|EFH33206.1| flagellar protein export ATPase FliI [Brucella abortus bv. 5 str. B3196] Length = 453 Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/418 (51%), Positives = 288/418 (68%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEETRDLRAIGAYQKSHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|148558082|ref|YP_001257195.1| flagellum-specific ATP synthase [Brucella ovis ATCC 25840] gi|148369367|gb|ABQ62239.1| flagellum-specific ATP synthase [Brucella ovis ATCC 25840] Length = 453 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/418 (51%), Positives = 288/418 (68%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDMVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGY SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYTPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|254473365|ref|ZP_05086762.1| flagellum-specific ATP synthase protein [Pseudovibrio sp. JE062] gi|211957481|gb|EEA92684.1| flagellum-specific ATP synthase protein [Pseudovibrio sp. JE062] Length = 386 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 204/384 (53%), Positives = 278/384 (72%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113 N + G+VIRI D V + P ++ LG V G P W GR+INA G PI Sbjct: 3 NNGEEFGEVIRIEPDSVLVKPYASRSDLGLGIKVKRCGELSFYPDNSWRGRIINAFGHPI 62 Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 DG S+ +G + PP ++R RV+ TG+RV+D+FTP+CHGQR+G+FAGSG+G Sbjct: 63 DGLGSMAEGPTLASFNNLPPPPVHRARVKDAALTGVRVLDLFTPICHGQRLGIFAGSGVG 122 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKM 233 KSTLLSM ARS+ FD V+I L+GERGREVREF+E+ LGD L KSVVVVAT DESP++R++ Sbjct: 123 KSTLLSMIARSNSFDTVVIGLIGERGREVREFVEETLGDQLSKSVVVVATGDESPMMRRL 182 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 AP TA+T+AE+F +G +VLLI+DS+TR+AH++R++A +GE ++RGYP SVFSELP L Sbjct: 183 APKTAMTVAEHFRDQGQSVLLIVDSVTRYAHALRDVALAAGEPALSRGYPPSVFSELPLL 242 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER GP + G +TA+ SVLVDGD+HNDP+AD++R +LDGH+VL+R +AEEGRYP V+ Sbjct: 243 LERAGPGIEGSGMMTAIFSVLVDGDDHNDPVADNIRGLLDGHVVLDRHIAEEGRYPAVNV 302 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 L S+SRLA WS E++L++ L +I +FE+T+D+R++GGY+ GVD +LD+A+ P I Sbjct: 303 LGSISRLAQSCWSPQERELITKLKAMIAKFEDTKDLRMMGGYKEGVDPLLDQAIEIAPKI 362 Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437 Y L Q SS+D F E+ + L Sbjct: 363 YSALVQGLDAPSSQDAFNELAQLL 386 >gi|254720628|ref|ZP_05182439.1| flagellum-specific ATP synthase [Brucella sp. 83/13] gi|265985672|ref|ZP_06098407.1| flagellum-specific ATP synthase [Brucella sp. 83/13] gi|306837352|ref|ZP_07470231.1| ATPase FliI/YscN family [Brucella sp. NF 2653] gi|264664264|gb|EEZ34525.1| flagellum-specific ATP synthase [Brucella sp. 83/13] gi|306407544|gb|EFM63744.1| ATPase FliI/YscN family [Brucella sp. NF 2653] Length = 453 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 218/418 (52%), Positives = 289/418 (69%), Gaps = 2/418 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALCRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMVGHLGKTITVVATGDESPVMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSIV 387 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 388 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 445 >gi|240137256|ref|YP_002961725.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1] gi|240007222|gb|ACS38448.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1] Length = 442 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 207/420 (49%), Positives = 287/420 (68%) Query: 19 LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78 LV G + +T+ V +S +V LGD + +G+V+RI+ + P Sbjct: 22 LVRVAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQVGEVVRIDAAGATVKPFESR 81 Query: 79 EEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138 E +G L G ++ P W GRVI+ALG+PIDG L +G S+ + + P AM R Sbjct: 82 IEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPIDGLGPLAEGPASVPLDADPPAAMTR 141 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198 RV+ TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M A + FD V+++LVGER Sbjct: 142 ARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAMLAGAQGFDSVVVALVGER 201 Query: 199 GREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 GREVREF+E + ++V+VV+T DESP++R+ AP A+ +AE F +G++VLLI+DS Sbjct: 202 GREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKVALAVAESFRDRGESVLLIVDS 261 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TR+AH+ R++A +GE VARGYP SVFS+LPRLLER GP + G IT + SVLVDGD Sbjct: 262 VTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPGAEGTGTITGIFSVLVDGD 321 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 +HNDP+ADS+R LDGH+VL+R++AE+GRYP ++ L S+SRLA + W+ D+++LV L Sbjct: 322 DHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRLAGEVWTGDQRELVRKLKS 381 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 ++ RFEETRD+RL+GGYR G D LD+AV VP IY+ L+Q P S D F E+ + L+ Sbjct: 382 MMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQEPGQPPSRDAFLELAQSLR 441 >gi|163850122|ref|YP_001638165.1| flagellum-specific ATP synthase [Methylobacterium extorquens PA1] gi|163661727|gb|ABY29094.1| ATPase, FliI/YscN family [Methylobacterium extorquens PA1] Length = 442 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 206/420 (49%), Positives = 287/420 (68%) Query: 19 LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78 LV G + +T+ V +S +V LGD + +G+V+RI+ + P Sbjct: 22 LVRVAGPVREVTASAARVAGVSAFVRLGDRMGFSADGRTQVGEVVRIDAAGATVKPFESR 81 Query: 79 EEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138 E +G L G ++ P W GRVI+ALG+P+DG L +G S+ + + P AM R Sbjct: 82 IEAGIGSLAHRIGPAQLRPDPRWKGRVIDALGRPVDGLGPLAEGPASVPLDADPPAAMTR 141 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198 RV+ TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M A + FD V+++LVGER Sbjct: 142 ARVKTPLPTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAMLAGAQGFDSVVVALVGER 201 Query: 199 GREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 GREVREF+E + ++V+VV+T DESP++R+ AP A+ +AE F +G++VLLI+DS Sbjct: 202 GREVREFLEGPIAAARDRAVIVVSTGDESPMMRRQAPKVALAVAESFRDRGESVLLIVDS 261 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TR+AH+ R++A +GE VARGYP SVFS+LPRLLER GP + G IT + SVLVDGD Sbjct: 262 VTRYAHAARDVALAAGEPAVARGYPPSVFSDLPRLLERAGPGAEGTGTITGIFSVLVDGD 321 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 +HNDP+ADS+R LDGH+VL+R++AE+GRYP ++ L S+SRLA + W+ D+++LV L Sbjct: 322 DHNDPVADSIRGTLDGHVVLDRAIAEQGRYPAIELLGSISRLAGEVWTGDQRELVRKLKS 381 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 ++ RFEETRD+RL+GGYR G D LD+AV VP IY+ L+Q P S D F E+ + L+ Sbjct: 382 MMARFEETRDLRLMGGYRAGSDPDLDQAVSLVPRIYEALRQEPGQPPSRDAFLELAQSLR 441 >gi|296447448|ref|ZP_06889373.1| ATPase, FliI/YscN family [Methylosinus trichosporium OB3b] gi|296255068|gb|EFH02170.1| ATPase, FliI/YscN family [Methylosinus trichosporium OB3b] Length = 446 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/424 (49%), Positives = 289/424 (68%), Gaps = 1/424 (0%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75 +K+L G ++ + + + V LS +V LG+ V + LGQV+++ D + Sbjct: 17 NKDLARVSGLVTEVAASHCRVLGLSDFVELGECVRFGAPTDERLGQVVKVAKDGAIVKCF 76 Query: 76 GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 I L F G I+P W GRV++A G+P+D ++ +GD S+++ + P A Sbjct: 77 DDRARIGLNTPAFRAGPIEIAPHPDWIGRVLDAFGRPVDDRGAVSRGDASLQVDASAPLA 136 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 M R RV +TG++ +D FTP+C GQRIGVFAGSG+GKSTLL M AR+ FD ++ LV Sbjct: 137 MRRARVTTPVRTGVKAVDCFTPICAGQRIGVFAGSGVGKSTLLGMLARAPGFDLAVVCLV 196 Query: 196 GERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREVREF+E+ L G + + S+ +VAT DESP++R++APLTA T+AEYF G NVLL Sbjct: 197 GERGREVREFLEEALAGAHARDSITIVATGDESPMMRRLAPLTATTVAEYFRDCGRNVLL 256 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 I+DS+TRFAH+ RE+A +GE PVA GY SVF+++PRLLER GP E+ KG IT V SVL Sbjct: 257 IVDSVTRFAHASREVALAAGEPPVAHGYTPSVFADIPRLLERAGPGEEGKGTITGVFSVL 316 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 VDGDNHNDPIAD VR LDGHIVL+R++AE+GRYP +D S+SRLA AW +++ L+ Sbjct: 317 VDGDNHNDPIADCVRGTLDGHIVLDRAIAEQGRYPAIDLKTSISRLAHHAWRPEQRHLIQ 376 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434 L L+ RFE+TRD+R++GGY+ G D LD++V VP +Y+ + QSP S D F+E+ Sbjct: 377 KLRALVSRFEDTRDLRMLGGYQKGSDPELDQSVLLVPKLYEAVCQSPQSPPSMDPFREVA 436 Query: 435 KKLQ 438 +LQ Sbjct: 437 DRLQ 440 >gi|254504837|ref|ZP_05116988.1| ATPase FliI/YscN family [Labrenzia alexandrii DFL-11] gi|222440908|gb|EEE47587.1| ATPase FliI/YscN family [Labrenzia alexandrii DFL-11] Length = 448 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 205/414 (49%), Positives = 288/414 (69%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G ++ +++ V+ LS+ VCLGD + +G++ G++IR+ V + P+ +I + Sbjct: 31 GQVTQVSAEAIRVSGLSRVVCLGDLIQFEGRSGVRQGEIIRLEQKDVVVKPLERVSDIGI 90 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 G + G I P W GR+INALG+PIDG L G + + PPAMNR++V + Sbjct: 91 GSVASLMGGLAIHPDLSWRGRIINALGEPIDGQGQLRHGVEAFLLDRAPPPAMNREKVTE 150 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 G +TG+RVID+FTPLC GQRIGVFAGSG+GKSTLL M A FD V++ LVGERGREVR Sbjct: 151 GVRTGVRVIDLFTPLCVGQRIGVFAGSGVGKSTLLGMLAGFGEFDTVVVGLVGERGREVR 210 Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 EFI+D LG+ + SVVV +T DES + R++AP TA+++AEYF ++G VLLILDS TRFA Sbjct: 211 EFIDDILGETIANSVVVASTGDESAMQRRLAPKTAMSVAEYFRAQGHKVLLILDSATRFA 270 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 H+ R++A +GE PVARGYP SVF++L RL+ER GP +G+IT + SVLVDGD+HNDP Sbjct: 271 HAARDVALAAGEPPVARGYPPSVFADLARLIERAGPGASGEGSITGIFSVLVDGDDHNDP 330 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383 ++D++R +LDGHIVL+R AE GRYPPV+ L S SRLA +AW+ D+++L+ + LI + Sbjct: 331 VSDAIRGLLDGHIVLDRKTAESGRYPPVEILKSTSRLASRAWTEDQQELIHRIKGLISHY 390 Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 E+T+D+R++GG++ D L+KA VP IY+ ++Q D F E+ + L Sbjct: 391 EDTKDLRMMGGFQITGDEHLEKACRLVPRIYEAMRQGAKQPVPGDPFAELAQAL 444 >gi|118589941|ref|ZP_01547345.1| flagellum-specific ATP synthase [Stappia aggregata IAM 12614] gi|118437438|gb|EAV44075.1| flagellum-specific ATP synthase [Stappia aggregata IAM 12614] Length = 448 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 205/407 (50%), Positives = 285/407 (70%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G ++ ++S V+ LS+ VCLGD V +G++ G++IR++ V I P+ +I + Sbjct: 31 GRVTQVSSESIRVSGLSRVVCLGDLVQFEGRSGVRQGEIIRLDQKDVVIKPLERVTDIGI 90 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 G + G I P W GR++NALG+PIDG L G + + PPAMNR ++ + Sbjct: 91 GSVASVMGGLAIHPDMSWRGRIVNALGEPIDGAGPLAHGVEAFLLDRAPPPAMNRSKISE 150 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 G +TG+RVID+FTPLC GQR+GVFAGSG+GKSTLL M A FD V++ LVGERGREVR Sbjct: 151 GVRTGVRVIDLFTPLCVGQRVGVFAGSGVGKSTLLGMLAGFGDFDTVVVGLVGERGREVR 210 Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 EFI+D LG+ L SVVV +T DES + R++AP TA+++AEYF ++G VLLILDS TRFA Sbjct: 211 EFIDDILGETLAHSVVVASTGDESAMQRRLAPKTAMSVAEYFRAQGHKVLLILDSATRFA 270 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 H+ R++A +GE PVARG+P SVF++L RL+ER GP +G+IT + SVLVDGD+HNDP Sbjct: 271 HAARDVALAAGEPPVARGFPPSVFADLARLIERAGPGSSGEGSITGIFSVLVDGDDHNDP 330 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383 ++D++R +LDGHIVL+R +AE G YPPV L S SRLAD+AW+ D++ L+ + LI + Sbjct: 331 VSDAIRGLLDGHIVLDRQIAESGHYPPVSVLKSTSRLADRAWTQDQQDLIHRIKGLISYY 390 Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430 E+T+D+RL+GG++ D L+KA VP IY+ L+Q ++ D F Sbjct: 391 EDTKDLRLMGGFQTAGDEKLEKACRLVPRIYEALRQRSDQVAPSDPF 437 >gi|306841067|ref|ZP_07473790.1| ATPase FliI/YscN family [Brucella sp. BO2] gi|306288905|gb|EFM60208.1| ATPase FliI/YscN family [Brucella sp. BO2] Length = 413 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 213/402 (52%), Positives = 281/402 (69%), Gaps = 2/402 (0%) Query: 39 LSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP 97 LS+ LGD V + G+ + +L ++IR+ V + P SLG VF G RI P Sbjct: 4 LSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMPSLGAAVFEEGPLRIRP 63 Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 + W GRVINALG IDG +L G M S P A+ R RV++G +TG+ VIDIFTP Sbjct: 64 TPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARVDRGLRTGVNVIDIFTP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217 LC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGREVRE +E+ + +L K+ Sbjct: 124 LCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGREVREMLEETMAGHLGKT 183 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 + VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TRFAH+ RE+A + E P Sbjct: 184 ITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTRFAHAAREVAIAAEEPP 243 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 VARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+HNDP++D++R LDGHI Sbjct: 244 VARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDHNDPVSDTIRGTLDGHI 303 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R++A +GR+P VD SVSRLA W+ +++KLV L ++ RFEETRD+R IG Y+ Sbjct: 304 VLDRAIAAQGRFPAVDIPGSVSRLAKHNWTPEQRKLVMQLRSMVARFEETRDLRAIGAYQ 363 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 364 KGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 405 >gi|323136552|ref|ZP_08071633.1| ATPase, FliI/YscN family [Methylocystis sp. ATCC 49242] gi|322397869|gb|EFY00390.1| ATPase, FliI/YscN family [Methylocystis sp. ATCC 49242] Length = 447 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 211/434 (48%), Positives = 291/434 (67%), Gaps = 5/434 (1%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 ++K ++ AQ K+ V G ++ ++ V LS ++ L D V+ +G + Sbjct: 9 LRKAVDLYAQ-----EKDWVRIRGVVTEAFPSHFRVEGLSPFLRLDDCVMLEGHDRCFPA 63 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120 Q IRIN D I + LG V G F I+P W GRV+NA PID + Sbjct: 64 QAIRINRDGALIKAFESHAGVGLGARVTRTGPFEIAPHPDWKGRVLNAFAAPIDRREPPP 123 Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 G+ + + P AM+R RV TG+RV+D FTPLC GQR+GVFAGSG+GKSTLL+M Sbjct: 124 PGEARRAVDASPPKAMSRGRVRDPAPTGVRVVDAFTPLCRGQRVGVFAGSGVGKSTLLAM 183 Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240 +RS FD V+I LVGERGREVR+F+++ LGD ++ +VAT DESP++R++APLTA + Sbjct: 184 MSRSAAFDAVVICLVGERGREVRDFLDEILGDRSNLAITIVATGDESPMMRRLAPLTATS 243 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 IAEYF +G++VLLI+DS+TR+AH++REIA ++GE PVA G+ SVF++LPRLLER GP Sbjct: 244 IAEYFRDRGESVLLIMDSVTRYAHALREIALSAGEPPVANGFAPSVFADLPRLLERAGPG 303 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + G ITA+ SVL+DGDNHNDPIAD +R LDGHIVL R +AE+GRYP ++ L S+SRL Sbjct: 304 VEGGGAITAIFSVLIDGDNHNDPIADCIRGTLDGHIVLEREIAEQGRYPAINVLKSISRL 363 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 AD+ WS +++ L++ LI ++E+TRD+R++GGY+PG D LD+A+ P +Y+ LKQS Sbjct: 364 ADRVWSGEQRDLINECRALISKYEDTRDLRMLGGYQPGADAALDRAIELAPRLYEALKQS 423 Query: 421 PSDLSSEDVFQEIT 434 P S D EI Sbjct: 424 PHGEPSIDAIGEIA 437 >gi|170748126|ref|YP_001754386.1| flagellum-specific ATP synthase [Methylobacterium radiotolerans JCM 2831] gi|170654648|gb|ACB23703.1| ATPase, FliI/YscN family [Methylobacterium radiotolerans JCM 2831] Length = 439 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 211/430 (49%), Positives = 285/430 (66%) Query: 9 AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLD 68 A L L+ GG + I + + + + LGD + + + G+V+RI+ D Sbjct: 9 AMLGRRDDPPLIRIGGSVREIGAGHCRIRIAVPLLRLGDRMRIEAAGREIDGEVVRIDED 68 Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P E LG + P W RV+NALG PIDG L G +M + Sbjct: 69 GVILKPFEGRIEAGLGAPAYRVPTSGARPCEAWKDRVVNALGTPIDGKGDLPTGTRAMPL 128 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + PPAM R RV+ +TG+R +D+FTPLC QRIG+FAGSG+GK+TLLSM AR FD Sbjct: 129 DADPPPAMARSRVDSPLRTGVRAMDLFTPLCAAQRIGIFAGSGVGKTTLLSMLARCSGFD 188 Query: 189 KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248 V+++LVGERGREVREF+E + ++ ++VVVVAT DESP++R+ AP A +AEYF + Sbjct: 189 AVVVALVGERGREVREFLEGPMRESRSRAVVVVATGDESPMMRRQAPKLAFAVAEYFRDQ 248 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 G +VLL+LDS+TRFAH+ RE+A +GE PVARGYP SVF +LPRLLER GP G IT Sbjct: 249 GQSVLLVLDSVTRFAHAAREVALAAGEPPVARGYPPSVFGDLPRLLERAGPGLDGGGAIT 308 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 + SVLVDGD+HNDP+ADS+R LDGHIVL+R++A++GRYP +D L S+SRLAD+ W+ Sbjct: 309 GLFSVLVDGDDHNDPVADSIRGTLDGHIVLDRAIADQGRYPAIDVLGSISRLADRVWTEQ 368 Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 +++LV L LI R+E++RD+RL+GGY G D LD+AV VP IYD L+Q P+D S D Sbjct: 369 QRQLVRMLKSLIARYEDSRDLRLMGGYHVGADPELDQAVALVPKIYDALRQDPTDPQSLD 428 Query: 429 VFQEITKKLQ 438 F ++ L+ Sbjct: 429 AFLDLATALR 438 >gi|114706757|ref|ZP_01439657.1| flagellum-specific ATP synthase [Fulvimarina pelagi HTCC2506] gi|114537705|gb|EAU40829.1| flagellum-specific ATP synthase [Fulvimarina pelagi HTCC2506] Length = 446 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 205/415 (49%), Positives = 286/415 (68%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G I + + V LS +V LGD + G++ D LG+V+RI+ D + + P + Sbjct: 20 GRIVDVGPQSFRVAGLSPFVRLGDCISCPGEDRDELGEVVRIDADSLTVKPYTTRFNRGV 79 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 G G F I+P A W GRV++A +P D + +G+ + ++ A+ R R+ + Sbjct: 80 GSPAIKVGPFSITPDASWRGRVLDAFCRPQDDKGPVRQGEAIRPVDAQPLSALKRARLSE 139 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 G TG+ V+DIFTPL GQRIGVFAGSG+GKSTL+ M ++S FD VI++LVGERGREVR Sbjct: 140 GVPTGVSVVDIFTPLVKGQRIGVFAGSGVGKSTLMGMLSQSKGFDTVIVALVGERGREVR 199 Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 EF+E+ + L K V +VAT DESP++R++AP TA +AE+F +GD+VLLI+DS+TR+A Sbjct: 200 EFLEEVMAGQLDKVVTIVATGDESPMMRRLAPRTATAVAEHFRDRGDDVLLIVDSVTRYA 259 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 H+ R++A ++GE PV+RGYP S+FSELP+LLER G + G IT + +VLVDGD+HNDP Sbjct: 260 HAARDVALSAGEPPVSRGYPPSIFSELPQLLERAGTGIEGSGTITGIYAVLVDGDDHNDP 319 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383 IAD++R LDGHIVL+R +AE+GR+P VD L S+SRLA+KAW E++LV+ L + RF Sbjct: 320 IADAIRGTLDGHIVLDREIAEQGRFPAVDYLKSISRLAEKAWHGSERELVTRLRAMTSRF 379 Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 E+TRD+RL+GGY+ G D LD+AV VP IYDFL Q P + E F ++ L+ Sbjct: 380 EDTRDLRLLGGYQRGSDQTLDQAVDLVPHIYDFLTQRPGEGWHEKPFDALSAALK 434 >gi|312115281|ref|YP_004012877.1| ATPase, FliI/YscN family [Rhodomicrobium vannielii ATCC 17100] gi|311220410|gb|ADP71778.1| ATPase, FliI/YscN family [Rhodomicrobium vannielii ATCC 17100] Length = 459 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 214/433 (49%), Positives = 290/433 (66%), Gaps = 3/433 (0%) Query: 5 LETLAQLAED-YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63 LETLA+ E L + G + +++ + V LS+Y LGD+V D + + + Sbjct: 22 LETLAETFEAALDDRLAIVSGRVVELSTEHIRVEGLSKYTKLGDWVSIATDVGDAIAETL 81 Query: 64 RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123 R+ D + + + + LG V ++ P W GRVI+ALG+PID L +G Sbjct: 82 RVERDTILVRTIEERHQPFLGAPVRLASTMKLRPDETWKGRVIDALGRPIDNGPPLARGR 141 Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 S+ + P A+ RQRV + TG+RVID+FTPLC GQRIG+FAGSG+GKSTLLSM R Sbjct: 142 RSIPVDQAPPLALERQRVSEPVPTGVRVIDVFTPLCAGQRIGIFAGSGVGKSTLLSMLTR 201 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIA 242 FD + + +GERGREVREFI+D L L K+V+VV+TSDESP++R++A TA T+A Sbjct: 202 GSSFDVTVFAAIGERGREVREFIDDTLAKAGLAKAVLVVSTSDESPMMRRLAAKTAFTVA 261 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 EYF +G VLL+ DS+TR+AH++REIA +SGE PV+RGYP SVF++LP+LLER G + Sbjct: 262 EYFRDEGQRVLLVFDSVTRYAHAVREIALSSGEPPVSRGYPPSVFTDLPKLLERAG-NAS 320 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 G+IT V SVLVDGD+HNDP+AD++R ILDGHIVL+R++A++GR+P VD L SVSRLA Sbjct: 321 GTGSITGVFSVLVDGDDHNDPVADTLRGILDGHIVLDRAIADQGRFPAVDILGSVSRLAP 380 Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422 + WS +K V L LI RFEETRDIR+I G++P D LDKAV VP +Y +L QS Sbjct: 381 RVWSPSQKTAVRDLRGLISRFEETRDIRMIAGHKPNNDAELDKAVRLVPALYRYLTQSAE 440 Query: 423 DLSSEDVFQEITK 435 DL + ++ + Sbjct: 441 DLHPGETLDDMLR 453 >gi|170744542|ref|YP_001773197.1| flagellum-specific ATP synthase [Methylobacterium sp. 4-46] gi|168198816|gb|ACA20763.1| ATPase, FliI/YscN family [Methylobacterium sp. 4-46] Length = 441 Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust. Identities = 199/423 (47%), Positives = 288/423 (68%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75 S +V GG + +T+ V ++ +V LGD + + + +V+R++ + P Sbjct: 18 SLPVVRVGGPVREVTASACRVAGVAPFVRLGDRMGIEADGRVQIAEVVRVDAAGATLKPF 77 Query: 76 GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 E +G F G R+ P+ W GRV++ALG+P+DG L G + + + P A Sbjct: 78 EARIEAGIGTRAFRIGPARVRPAPSWKGRVLDALGRPLDGLGPLPPGPDLVPLDADPPAA 137 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 + R R+ +TG+R ID+FTPLC GQRIG+FAGSG+GKSTLL+M A + FD V+++LV Sbjct: 138 LGRARLRAPLRTGVRAIDLFTPLCAGQRIGIFAGSGVGKSTLLAMLAGARGFDSVVVALV 197 Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 GERGREVREF+E L + ++ +VV+T DESP++R+ AP A+ +AE +G+ VLLI Sbjct: 198 GERGREVREFLEGPLAASRGRAAIVVSTGDESPMMRRQAPRLAMAVAESLRDRGEAVLLI 257 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TR+AH+ R++A +GE VARG+P SVFS+LPRLLER GP + +G+IT + SVLV Sbjct: 258 VDSVTRYAHAARDVALAAGEPAVARGFPPSVFSDLPRLLERAGPGQDGRGSITGIFSVLV 317 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 DGD+HNDP+ADS+R LDGH+VL+R +A++GRYP +D L S+SRL+D+ W+ +++ +V Sbjct: 318 DGDDHNDPVADSIRGTLDGHVVLDRGIADQGRYPAIDLLGSISRLSDQVWTPEQRDVVRR 377 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 L +I RFEETRD+RL+GGYR G D LD+AV VP IY+ L+Q P SED F E+ + Sbjct: 378 LKGMIARFEETRDLRLMGGYRAGSDAELDQAVGLVPRIYESLRQEPGQPPSEDAFLELAQ 437 Query: 436 KLQ 438 L+ Sbjct: 438 SLR 440 >gi|27355166|dbj|BAC52150.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110] Length = 379 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 198/377 (52%), Positives = 270/377 (71%) Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121 ++RI+ + + P LG + + +P W GRVINALG P+DG L Sbjct: 1 MVRIDSEGIIAKPFDRQFAGGLGSVAYRMPPLSFAPDPSWKGRVINALGAPLDGQGPLTP 60 Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 G ++ ++ P AM R RV K +TG+RVID+F P+C GQR+G+FAGSG+GKSTLL+M Sbjct: 61 GSRAVSAEAEAPSAMKRARVHKPLRTGVRVIDLFAPICAGQRVGIFAGSGVGKSTLLAML 120 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241 ARS FD V+++LVGERGREVREFIED LG N ++V +V+T DESP++R++AP TA+ + Sbjct: 121 ARSQGFDTVVLALVGERGREVREFIEDVLGANRNRAVTIVSTGDESPMMRRLAPKTAMAV 180 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AEYF +G++VLL++DSITRFAH+ RE+A +GE VARGY +VF++LPRLLER GP E Sbjct: 181 AEYFRDRGESVLLVVDSITRFAHAAREVALAAGEPAVARGYAPTVFTDLPRLLERAGPGE 240 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G IT + SVLVDGD+HN+PIAD++RS LDGHIVL+R +A++ RYP VD LASVSRLA Sbjct: 241 EGSGTITGIFSVLVDGDDHNEPIADTIRSTLDGHIVLSRHIADQARYPAVDVLASVSRLA 300 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421 W +E++LVS L +I ++E+TRD+RL+GGY+ G D LD+A+ VP IY ++Q Sbjct: 301 HNVWDPEERELVSKLRTMIAKYEDTRDLRLMGGYQSGRDSGLDQAIDLVPRIYSAMRQDA 360 Query: 422 SDLSSEDVFQEITKKLQ 438 S S D F+E+ L+ Sbjct: 361 SAQPSADPFRELRDMLK 377 >gi|17989450|ref|NP_542083.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str. 16M] gi|17985329|gb|AAL54347.1| flagellum-specific ATP synthase [Brucella melitensis bv. 1 str. 16M] Length = 380 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 201/358 (56%), Positives = 260/358 (72%), Gaps = 1/358 (0%) Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 15 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 74 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQR G+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 75 DRGLRTGVNVIDIFTPLCFGQRTGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 134 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 135 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 194 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 195 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 254 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 255 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 314 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 315 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 372 >gi|23011134|ref|ZP_00051589.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase [Magnetospirillum magnetotacticum MS-1] Length = 339 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 186/335 (55%), Positives = 253/335 (75%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 RV++ALG+P+DG L +G S+ + + P AM R RV+ TG+R ID+FTPLC GQR Sbjct: 4 RVVDALGRPVDGLGPLQEGGDSVALDADPPSAMTRARVKTPLLTGVRAIDLFTPLCAGQR 63 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVAT 223 IG+FAGSG+GKSTLL+M A ++ FD V+++LVGERGREVREF+E + ++V+VV+T Sbjct: 64 IGIFAGSGVGKSTLLAMLAGAEGFDSVVVALVGERGREVREFLEGPIAAVRDRAVIVVST 123 Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 DESP++R+ AP A+ +AE F +G++VLLI+DS+TR+AH+ R++A +GE VARGYP Sbjct: 124 GDESPMMRRQAPKVALAVAESFRDRGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYP 183 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 SVFS+LPRLLER GP + KG IT + SVLVDGD+HNDP+ADS+R LDGH+VL+R++A Sbjct: 184 PSVFSDLPRLLERAGPGAEGKGAITGIFSVLVDGDDHNDPVADSIRGTLDGHVVLDRAIA 243 Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403 E+GRYP +D L S+SRLA + WS D+++LV L ++ RFEETRD+RL+GGYR G D L Sbjct: 244 EQGRYPAIDLLGSISRLAGEVWSGDQRELVRKLKTMMARFEETRDLRLMGGYRAGSDPDL 303 Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 D+AV VP IY+ L+Q P S D F E+ + L+ Sbjct: 304 DQAVTLVPRIYEALRQEPGQPPSRDAFLELAQSLR 338 >gi|10644737|gb|AAG21379.1| flagella-specific ATPase [Bartonella bacilliformis] Length = 315 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 184/313 (58%), Positives = 244/313 (77%) Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185 M + + PPA+ R RV G +TG++VIDIFTPLC GQRIG+F+GSG+GKSTLLSM ++D Sbjct: 1 MAVEAHAPPALARARVGNGLRTGVKVIDIFTPLCFGQRIGIFSGSGVGKSTLLSMMMQAD 60 Query: 186 CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 FDKV+++L GERGREVR+ ++D L D L K V V+ATSDESP++R++AP+ A TIAEYF Sbjct: 61 HFDKVVLALTGERGREVRDMLDDTLQDKLDKVVAVIATSDESPMMRRLAPIMATTIAEYF 120 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 SS GDNVLL++DSITR+A ++REIA ++ E PV+RG+P VFSELPRLLER GP K KG Sbjct: 121 SSLGDNVLLVVDSITRYALAVREIAISAHEPPVSRGFPPRVFSELPRLLERAGPGRKGKG 180 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT V +VLVDGD+HNDPIAD++R ILDGHIVL+R++A +GR+P VD +S+SRLA +W Sbjct: 181 SITGVYAVLVDGDDHNDPIADAIRGILDGHIVLDRAIAAQGRFPAVDISSSISRLASHSW 240 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + +++ LV SL +I R+EETRD+R +G YRPG D ILD+AVH VP IY + Q+ Sbjct: 241 TGEQRILVQSLKEMIFRYEETRDLRAMGAYRPGTDHILDQAVHLVPSIYAAMNQNIDTPL 300 Query: 426 SEDVFQEITKKLQ 438 + + E+ K L+ Sbjct: 301 VRNPYDELAKLLK 313 >gi|254706313|ref|ZP_05168141.1| flagellum-specific ATP synthase [Brucella pinnipedialis M163/99/10] gi|261313760|ref|ZP_05952957.1| flagellum-specific ATP synthase [Brucella pinnipedialis M163/99/10] gi|261302786|gb|EEY06283.1| flagellum-specific ATP synthase [Brucella pinnipedialis M163/99/10] Length = 390 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 192/363 (52%), Positives = 252/363 (69%), Gaps = 2/363 (0%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKPGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+IT + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSITGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP++D++R LDGHIVL+R++A +GR+P VD ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDPVSDTIRGTLDGHIVLDRAIAAQGRFPAVDIPASVSRLAKHNWTPEQRKLVMQLRSMV 387 Query: 381 HRF 383 RF Sbjct: 388 ARF 390 >gi|23499892|ref|NP_699332.1| flagellum-specific ATP synthase [Brucella suis 1330] gi|23463467|gb|AAN33337.1| flagellum-specific ATP synthase FliI [Brucella suis 1330] Length = 422 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 201/418 (48%), Positives = 263/418 (62%), Gaps = 33/418 (7%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 GG +S ++ V LS+ LGD V + G+ + +L ++IR+ V + P Sbjct: 28 GGTVSDVSRSSIAVRGLSRDARLGDTVAIRAGEGAPSLAEIIRVADLQVLVKPFDDRIMP 87 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 SLG VF G RI P+ W GRVINALG IDG +L G M S P A+ R RV Sbjct: 88 SLGAAVFEEGPLRIRPAPEWRGRVINALGNAIDGKGALKLGTRPMAAESLAPAALRRARV 147 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++G +TG+ VIDIFTPLC GQRIG+FAGSG+GKSTLL+M R+ FD V+++L GERGRE Sbjct: 148 DRGLRTGVNVIDIFTPLCFGQRIGIFAGSGVGKSTLLAMMTRAADFDTVVLALTGERGRE 207 Query: 202 VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 VRE +E+ + +L K++ VVAT DESP++R++AP TA IAEYF G NVLLI+DS+TR Sbjct: 208 VREMLEETMAGHLGKTITVVATGDESPMMRRLAPNTATAIAEYFRDLGQNVLLIVDSVTR 267 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNH 320 FAH+ RE+A + E PVARGYP SVFS+LPRLLER GP E G+I + SVLVDGD+H Sbjct: 268 FAHAAREVAIAAEEPPVARGYPPSVFSQLPRLLERAGPGSAEAGGSIAGIYSVLVDGDDH 327 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDP ASVSRLA W+ +++KLV L ++ Sbjct: 328 NDP-------------------------------ASVSRLAKHNWTPEQRKLVMQLRSMV 356 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RFEETRD+R IG Y+ G D +LD+AV VP IY+ L+QSP S+D + ++ L+ Sbjct: 357 ARFEETRDLRAIGAYQKGHDGLLDQAVDFVPRIYEALQQSPETGLSDDPYNDLAAALR 414 >gi|114765225|ref|ZP_01444357.1| flagellum-specific ATP synthase [Pelagibaca bermudensis HTCC2601] gi|114542360|gb|EAU45388.1| flagellum-specific ATP synthase [Roseovarius sp. HTCC2601] Length = 418 Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 176/402 (43%), Positives = 256/402 (63%), Gaps = 3/402 (0%) Query: 35 TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRF 93 TV+ L + V +G V QG N L +V+ I+ + P G + + GD V Sbjct: 3 TVSGLERAVGIGAHCVVQGANGPVLAEVVGIDESGTRLLPFGSWDGVRTGDPVAVTQSGA 62 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 + P W GRV+NALG+P+DG L +GD + + PPA R+RV T ++V+D Sbjct: 63 ELRPDDAWIGRVVNALGQPLDGKGRLPEGDRPRPLRAAPPPAFTRRRVGDRLSTRLKVMD 122 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212 +F PLC GQR+GVF+GSG+GKST+++M AR+ D +++ LVGERGREV++F++D LG+ Sbjct: 123 VFAPLCRGQRMGVFSGSGVGKSTMMAMLARNAQADVIVVGLVGERGREVQDFLQDDLGEE 182 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L ++VVVV+T DE P++R+ A TA T+AE+F +G VLL+LDS+TRFA + REI Sbjct: 183 GLARAVVVVSTGDEPPLMRRQAAWTATTVAEHFRDQGKQVLLLLDSVTRFAMAQREIGLA 242 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE P A+GYP + F+ELPR++ER GP E G+ITA+ +VLVDGD+ +DPIAD+VR I+ Sbjct: 243 GGEPPTAKGYPPTTFAELPRMMERAGPGSGEGGDITALYTVLVDGDDMDDPIADAVRGIM 302 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIVL+R +AE GR+P V+ L S+SR+ +E + + + R+ + ++ I Sbjct: 303 DGHIVLDRRIAETGRFPAVNLLRSISRMLPDCHGPEEYAIYRAARCAMARYADMEELIRI 362 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433 G YRPG D +D A+ + D L+QS D + + F I Sbjct: 363 GAYRPGSDAEVDAAIKLFQPLEDLLRQSKRDAMEPNETFARI 404 >gi|84502399|ref|ZP_01000535.1| flagellum-specific ATP synthase [Oceanicola batsensis HTCC2597] gi|84389211|gb|EAQ02008.1| flagellum-specific ATP synthase [Oceanicola batsensis HTCC2597] Length = 450 Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 184/440 (41%), Positives = 271/440 (61%), Gaps = 5/440 (1%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 M+ L+ LA + G +S+I + TV L++ + +G +GK L Sbjct: 1 MKTAFSQLSTLARTTEGARIA--GEVSAIVGLTLTVVGLNRALGIGQRCTIKGKKGPVLA 58 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P G +++GD V I P W GRV+NALG PIDG SL Sbjct: 59 EVVSVDEKGTQVLPFGNWNGVTIGDRVEISTSGESIRPDLSWIGRVLNALGDPIDGLGSL 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 +G + + P A R+RV + TG+RV D+FTPLC GQR+G+FAGSG+GKS+LLS Sbjct: 119 HEGPVPCPPKNTPPNAYARRRVGERIDTGVRVFDVFTPLCKGQRMGIFAGSGVGKSSLLS 178 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M AR D +++ LVGERGREV++FI+ LG + L +SV+VV+T DE P++R+ A TA Sbjct: 179 MMARRAEADVIVVGLVGERGREVQDFIQKDLGAEGLNRSVIVVSTGDEPPLMRRQAAWTA 238 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +AEYF +G VLL++DS+TRFA + REI GE P +GYP +VFSELP+LLER G Sbjct: 239 TAVAEYFRDQGLQVLLLIDSVTRFAMAQREIGLAGGEPPTTKGYPPTVFSELPQLLERSG 298 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P EKG+ITA+ +VLVDGD+ N+P++D+ R I+DGH+VL+R++AE+GR+P V+ SVS Sbjct: 299 PGVGEKGDITALYTVLVDGDDMNEPVSDAARGIMDGHVVLDRAIAEQGRFPAVNIQKSVS 358 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + E ++ + + R+ + ++ IG YR G D +D AV +FL Sbjct: 359 RMLPDCHNPGEYAVLKAARRALARYADMEELIRIGAYREGSDEEIDAAVRFARPAENFLT 418 Query: 419 QSPSD-LSSEDVFQEITKKL 437 QS ++ +SE F ++ + L Sbjct: 419 QSKTESTTSEQAFAKLYELL 438 >gi|89068700|ref|ZP_01156086.1| flagellum-specific ATP synthase [Oceanicola granulosus HTCC2516] gi|89045663|gb|EAR51725.1| flagellum-specific ATP synthase [Oceanicola granulosus HTCC2516] Length = 438 Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 175/417 (41%), Positives = 258/417 (61%), Gaps = 3/417 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G +SS+ + T T L + + +G G LG+V+ ++ +I P G + I Sbjct: 8 GRVSSVRGLLLTATGLERAIGIGQRCRVLGAGGAVLGEVVGVDGAGSHILPFGTWDGIVA 67 Query: 84 GDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 GD V R+ P W GRV++ LG+P+D L +G + + PPA +R+RV Sbjct: 68 GDQVEVSPQGERVRPCDGWIGRVVDPLGRPLDRAGPLPEGRSPRAVRAGPPPAFDRRRVG 127 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 +TGIR D FTPLC GQR+GVFAGSG+GKSTL++M AR+ D +++ L+GERGREV Sbjct: 128 ARLETGIRAFDAFTPLCRGQRMGVFAGSGVGKSTLMAMLARNADVDVIVVGLIGERGREV 187 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 ++FI+ LG + L ++V+VVAT DE P++R+ A TA+ +AE+F +G VLL+LDSITR Sbjct: 188 QDFIQADLGPEGLARAVLVVATGDEPPLMRRQAAWTAMAVAEHFRDRGKQVLLLLDSITR 247 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + REI + GE P +RGYP +VF+ELPRLLER GP +G+ITA+ +VLV+G + Sbjct: 248 FATAQREIGLSGGEPPTSRGYPPTVFAELPRLLERAGPGCDGQGDITALFTVLVEGSDME 307 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +P+ADSVR I DGH++L+R +AE GRYP +D SVSR+ DE ++S+ + Sbjct: 308 EPVADSVRGITDGHVILDRRIAERGRYPAIDLQRSVSRMLPDCHGPDEFAILSAARRALG 367 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS-SEDVFQEITKKL 437 R+ + ++ IG YRPG D D A+ + +L Q + + + F ++ + L Sbjct: 368 RYGDMEELVRIGAYRPGSDPETDAAIRFADPVAAYLGQRKGEATPPRETFADLYRLL 424 >gi|209963545|ref|YP_002296460.1| flagellum-specific ATP synthase [Rhodospirillum centenum SW] gi|209957011|gb|ACI97647.1| H+-transporting two-sector ATPase FliI [Rhodospirillum centenum SW] Length = 461 Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 178/416 (42%), Positives = 259/416 (62%), Gaps = 8/416 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82 G +SS + + V L + + +GD ++ L +VI ++ + P G + + Sbjct: 21 GKVSSCSGMTVEVEGLERRLAVGDACRVFARDGRALACEVIGFSVGRAVLMPFGPLDGLG 80 Query: 83 LGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 LG V G FR P+ W GRV++ G+P+DG L +GD + + + P A R+ Sbjct: 81 LGCRVETGGEPASFR--PALSWLGRVVDGFGRPVDGRGPLSRGDENRVLRAAPPHAYERR 138 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ +TG+RV+D F PLC GQR+GVFAGSG+GKSTLL+M ARS D +I L+GERG Sbjct: 139 RIGPRLETGLRVVDTFVPLCRGQRLGVFAGSGVGKSTLLAMLARSSAADVNVIGLIGERG 198 Query: 200 REVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REV+EFI+D LG + L +SVVVVATSDE ++R+ A + +AEYF +G +VL ++DS Sbjct: 199 REVQEFIQDDLGPEGLARSVVVVATSDEPALMRRQAAWLTLGLAEYFRDQGRDVLCMMDS 258 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI ++GE P +GYP +VF+ELPRLLER GP + G+IT + +VLV+G Sbjct: 259 VTRFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERAGPGREGTGDITGIFTVLVEGG 318 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 +H++P+AD+VR ILDGH+VL RS+AE GRYP D L SVSR S +E + Sbjct: 319 DHDEPVADAVRGILDGHLVLTRSIAERGRYPAADVLKSVSRALPGCHSEEENLTMGRARA 378 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS-SEDVFQEI 433 L+ R+E ++ +G Y+ G D LD A+ + +FL+Q ++ + S D F + Sbjct: 379 LLARYESMEELVRLGAYKAGSDPELDLAIKANEPLENFLRQGKTETTASADAFARL 434 >gi|154252622|ref|YP_001413446.1| flagellum-specific ATP synthase [Parvibaculum lavamentivorans DS-1] gi|154156572|gb|ABS63789.1| flagellar protein export ATPase FliI [Parvibaculum lavamentivorans DS-1] Length = 445 Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 162/333 (48%), Positives = 227/333 (68%), Gaps = 2/333 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + PS+ W GRV+NA+G+P+DG + +G + + PPA RQRV G+R ++ Sbjct: 91 VYPSSAWLGRVVNAMGEPMDGKGPIAQGAQPYLLRNMPPPAHTRQRVRGKIDLGVRALNT 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 FT C GQR+G+FAGSG+GKS LLSM AR+ D +I L+GERGREV+EFIED LG + Sbjct: 151 FTTCCRGQRMGIFAGSGVGKSVLLSMLARNTACDVSVIGLIGERGREVQEFIEDDLGPEG 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L +SVVVVATSDE ++R+ A +++AEYF + NVL ++DS+TRFA + REI ++ Sbjct: 211 LARSVVVVATSDEPALMRRQAAYLTLSLAEYFRDRDQNVLCMMDSVTRFAVAQREIGLST 270 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P ++GY +VF+ELP+LLER GP GNIT + +VLVDGD+HN+P+AD+VRSILD Sbjct: 271 GEPPTSKGYTPTVFAELPKLLERAGPGTG-SGNITGLFTVLVDGDDHNEPVADAVRSILD 329 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIV+ RS+AE GRYP ++ L SVSR A+E +L+ L+ +++ ++ +G Sbjct: 330 GHIVMERSIAERGRYPAINVLKSVSRTMPDCNEAEENELIRRARALMATYDDMEELIRLG 389 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 YRPG D +D+A+ P + FL Q+ D SS Sbjct: 390 AYRPGSDPQVDEAIFYQPALEAFLAQNKHDASS 422 >gi|144900259|emb|CAM77123.1| flagellum-specific ATP synthase [Magnetospirillum gryphiswaldense MSR-1] Length = 450 Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 166/345 (48%), Positives = 234/345 (67%), Gaps = 3/345 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + PS W GRVINA +P+DG L GD I + P A +RQRV G+R ++ Sbjct: 95 VHPSDAWLGRVINAFAQPVDGLGPLPLGDNPYPIRATPPSAHSRQRVAGKVDLGVRAVNS 154 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 F +C GQR+G+FAGSG+GKS++LSM A++ D II L+GERGRE REFIED LG + Sbjct: 155 FLTMCRGQRMGIFAGSGVGKSSILSMMAKNTSCDVSIIGLIGERGREAREFIEDDLGEEG 214 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +K+SVVVV+TSDESP++R+ A +++AEYF +G +VL ++DS+TRFA + REI+ ++ Sbjct: 215 MKRSVVVVSTSDESPLMRRQAAYLTLSVAEYFRDQGKDVLCMMDSVTRFAMAQREISLSA 274 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P ++GY +VF+ELPRLLER GP KG+IT + +VLVDGD+HN+PI+D+VR ILD Sbjct: 275 GEPPASKGYTPTVFAELPRLLERAGPGTG-KGSITGLFTVLVDGDDHNEPISDAVRGILD 333 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R++A+ GRYP V+ L SVSR + E LVS L+ +E+ ++ +G Sbjct: 334 GHIVLDRAIADRGRYPAVNILRSVSRTMPGCNNEQENALVSRARKLLATYEDMAELIRLG 393 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437 YR G D +D+A+H P+I L Q D +S D + ++ + L Sbjct: 394 AYRKGTDPAVDEAIHYYPMIEKLLTQGKKDATSLRDCYAQLAQVL 438 >gi|254505088|ref|ZP_05117239.1| flagellar protein export ATPase FliI [Labrenzia alexandrii DFL-11] gi|222441159|gb|EEE47838.1| flagellar protein export ATPase FliI [Labrenzia alexandrii DFL-11] Length = 441 Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 159/326 (48%), Positives = 222/326 (68%), Gaps = 1/326 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + PS W GRVINALG+PIDG L G L ++ S PPA R RV G+R ++ Sbjct: 92 VHPSNAWLGRVINALGEPIDGKGPLPNGGLPRKLRSAPPPASERARVGPPLDLGVRALNT 151 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213 F C GQR+G+FAGSG+GKS L+SM AR+ D +I L+GERGREV+EFIED LG+ Sbjct: 152 FVTCCEGQRMGIFAGSGVGKSVLMSMLARNTQCDTAVIGLIGERGREVQEFIEDDLGEEG 211 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L +SVVVVATSDES ++R+ A A+T+AE+F +GD VL ++DS+TRFA + REI + Sbjct: 212 LARSVVVVATSDESVLMRRQAAYLAMTVAEHFRDEGDKVLCMMDSVTRFAMAQREIGLSI 271 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P ++GY +VF+ELPRLLER GP + G+IT + +VLV+GDNHN+P+AD+VR ILD Sbjct: 272 GEPPTSKGYTPTVFTELPRLLERAGPGKSGSGSITGLFTVLVEGDNHNEPVADAVRGILD 331 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GH+V+ R +AE GRYP ++ L SVSR + +++ ++ L+ + + ++ +G Sbjct: 332 GHVVMERGIAERGRYPAINVLKSVSRTMPRCVPPEQQPVLRKAKQLLSTYTDMEELIRLG 391 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 YR G D +D+A+++ I DFL Q Sbjct: 392 AYRRGSDPTVDEAIYRFGPIDDFLNQ 417 >gi|92118831|ref|YP_578560.1| flagellum-specific ATP synthase [Nitrobacter hamburgensis X14] gi|91801725|gb|ABE64100.1| ATPase FliI/YscN [Nitrobacter hamburgensis X14] Length = 454 Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 160/350 (45%), Positives = 239/350 (68%), Gaps = 5/350 (1%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ P+ W GRV+NA+G+PIDG +L +G + + + PPA +R+RV K G+R ++ Sbjct: 102 QVRPAPSWLGRVLNAMGEPIDGKGALPQGPVPVPFRNSPPPAHSRKRVGKPLDLGVRALN 161 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212 F C GQR+G+FAGSG+GKS LLSM AR+ D +I LVGERGREV+EF++D LG+ Sbjct: 162 TFLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADISVIGLVGERGREVQEFLQDDLGEE 221 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSDE ++R+ A + +AEYF +G +V+ ++DS+TRFA + REI + Sbjct: 222 GLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDEGKDVMCMMDSVTRFAMAQREIGLS 281 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P +GY +VF+ELPRLLER GP +KG IT + +VLVDGD+HN+P+AD+VR IL Sbjct: 282 TGEPPTTKGYTPTVFTELPRLLERAGPGAADKGTITGIFTVLVDGDDHNEPVADAVRGIL 341 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIV+ R++AE GRYP ++ L SVSR K+ +++ ++ F + ++ + Sbjct: 342 DGHIVMQRAIAERGRYPAINVLKSVSRTMPKSADPAFLPVITRGRQVMATFSDMEELIRL 401 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVF---QEITKKLQ 438 G YR G + +D+A+ P++ DFL+Q+ +++S ED + Q+I K L+ Sbjct: 402 GAYRTGSNAEVDEAIRLNPLLEDFLRQAKDEVTSIEDGYRRLQQILKTLE 451 >gi|58040126|ref|YP_192090.1| flagellum-specific ATP synthase [Gluconobacter oxydans 621H] gi|58002540|gb|AAW61434.1| Flagellum-specific ATP synthase [Gluconobacter oxydans 621H] Length = 452 Score = 326 bits (835), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 184/443 (41%), Positives = 274/443 (61%), Gaps = 18/443 (4%) Query: 5 LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVI 63 LE L+ L D+ VV G + + + TV L ++ +GD V + + + +V+ Sbjct: 8 LERLSNLTCDW----VV--GSVKDVIGLCLTVIGLEGFITIGDRVAVKALDGRVVQSEVV 61 Query: 64 RINLDIVYICPVGIGEEISLG-----DLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 D+ + G + I G L H G ++ S W GRV++ LG+PIDG Sbjct: 62 GFQGDVARLMSFGPLDGIGPGCEARIPLNRHDGGLGVNES--WLGRVLDPLGQPIDGKGP 119 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L + P A +R R+ + G+R +D FT GQR+G+FAGSG+GKSTLL Sbjct: 120 LFPSFERQPVQCPPPNAASRARLGERIDLGVRALDTFTTCRRGQRLGLFAGSGVGKSTLL 179 Query: 179 SMFAR-SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 SM AR +DC D +ISLVGERGREVREFIED LG + L +SV+V+ATSD P++R+ A L Sbjct: 180 SMLARGADC-DVAVISLVGERGREVREFIEDDLGPEGLARSVLVIATSDSPPLMRREAAL 238 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +A+ IAEYF ++G +VLL++DS+TRF ++REI ++GE P RGYP SVF+ELPRLLER Sbjct: 239 SAMAIAEYFRNQGKSVLLLMDSVTRFCMALREIGLSAGEPPATRGYPPSVFAELPRLLER 298 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 GP ++G ITA+ +VLV+GD+ N+P+AD+VR ILDGHI+L+R + E+GRYP +D L S Sbjct: 299 AGPGYADQGMITALFTVLVEGDDQNEPVADAVRGILDGHIILDRKIGEQGRYPAIDVLRS 358 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR S +E L + ++ D+ +G Y+PG D +D+A+ +P + +F Sbjct: 359 LSRAVPGCNSPEENALTQRARAAMATYQRMADMIRLGAYKPGTDREVDEAIALMPKLNEF 418 Query: 417 LKQSPSDLSSE-DVFQEITKKLQ 438 L Q ++ ++ + F+++ + +Q Sbjct: 419 LSQGRNERTTRAEAFEQLAQIMQ 441 >gi|296531772|ref|ZP_06894594.1| H+-transporting two-sector ATPase FliI [Roseomonas cervicalis ATCC 49957] gi|296267911|gb|EFH13716.1| H+-transporting two-sector ATPase FliI [Roseomonas cervicalis ATCC 49957] Length = 448 Score = 325 bits (834), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 176/435 (40%), Positives = 265/435 (60%), Gaps = 6/435 (1%) Query: 6 ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIR 64 +T AQLA + + G ++++ +VT L + V +GD + V + G+ + Sbjct: 13 DTAAQLARLPRRQ---RYGTLAAVRGAALSVTGLGEGVAIGDRMRVQRHGRPPVHGEFVA 69 Query: 65 INLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124 + D P G E +S G ++ + PS W GRV+++LG+P+DG L +G Sbjct: 70 FSPDSAIAVPEGGTEGLSPGARLWLEEPLCLYPSDAWLGRVVDSLGRPMDGRGPLPQGRR 129 Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 + + P A++R+ + +TG+R +D+FTP+C GQR+G+FA SG+GKSTL+ M AR Sbjct: 130 GVRLRQPPPAALSRKLIGARLETGLRALDVFTPICRGQRLGIFAASGVGKSTLIGMLARF 189 Query: 185 DCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D +++ LVGERGREVREF++ LG+ ++SVVVV+TSDE + R+ A ++ IAE Sbjct: 190 VAADVIVLGLVGERGREVREFLDHVLGEAGRRRSVVVVSTSDEPALSRRRAAQASLAIAE 249 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 +F ++G V L+LDSITR AH+ REI +GE AR Y SVF+ELP LLER GP + Sbjct: 250 HFRAEGRQVFLLLDSITRLAHAQREIGLAAGEPATARSYTPSVFTELPALLERAGPGPEG 309 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 +G+ITA+ +VLVDGD+H++PI+D+VR ILDGHIVL+R + E GR+P +D L SVSR + Sbjct: 310 EGDITAIFTVLVDGDDHDEPISDAVRGILDGHIVLDRRIGERGRWPAIDVLRSVSRALPR 369 Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 SA+E L++ L+ + ++ +G YRPG D +D A+ P + L Q + Sbjct: 370 CHSAEENALLAEARRLMATHADMAEMIRLGAYRPGSDAGVDAAIAHQPGLEALLAQGVDE 429 Query: 424 LSSE-DVFQEITKKL 437 SS + F + L Sbjct: 430 RSSTGEAFARLRASL 444 >gi|163744317|ref|ZP_02151677.1| flagellum-specific ATP synthase [Oceanibulbus indolifex HEL-45] gi|161381135|gb|EDQ05544.1| flagellum-specific ATP synthase [Oceanibulbus indolifex HEL-45] Length = 446 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 182/441 (41%), Positives = 266/441 (60%), Gaps = 7/441 (1%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 MQ L A + + + G + +IT + T L + + +G+ + G + Sbjct: 1 MQTLFSELTSFAREAGEAEIT--GEVRAITGITLTAVGLERVLGIGERCIVHGSDGPVHA 58 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + P G ++ GD V GR I P W GRVI+A P+DG L Sbjct: 59 EVVGLGTHGTELLPFGSWRGVAAGDRVEVAIGRDVIRPDESWKGRVISASAAPLDGKGHL 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 +G+ + + P A +R+R+ T +R +D+FTPLC GQR+G+FAGSG+GKSTL++ Sbjct: 119 PEGNQPRPLRAAPPGAFDRKRIGPKLATHVRALDVFTPLCQGQRLGIFAGSGVGKSTLMA 178 Query: 180 MFAR-SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 M AR +DC D V+++LVGERGREV++FI LG + ++K+V+VVAT DE P+ R+ A T Sbjct: 179 MLARYTDC-DVVVMALVGERGREVQDFISSDLGPEGMEKAVLVVATGDEPPLTRRQAAWT 237 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A+ +AE+F +G +VLL++DS+TRFA + REI S E P A+GYP +VFSELP++LER Sbjct: 238 AMAVAEHFRDQGQHVLLLMDSVTRFAMAQREIGLASREPPTAKGYPPTVFSELPQMLERA 297 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 GP KG+ITA+ +VLVDGD+ NDPIAD+VR I DGHIVL+R +AE+GRYP +D LASV Sbjct: 298 GPGPVGKGDITAIFTVLVDGDDMNDPIADAVRGITDGHIVLDRKIAEKGRYPAIDLLASV 357 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR S E L+++ + + ++ IG YR G + LD+A+ FL Sbjct: 358 SRTLPDCHSDAEYTLLTAAHKALAAHADMEELIRIGAYRSGSNPELDRAIAFAGPCEAFL 417 Query: 418 KQSPSDLSSEDV-FQEITKKL 437 Q ++ + F E+ L Sbjct: 418 SQRKAEHTPPQASFAEVAGML 438 >gi|46201676|ref|ZP_00054580.2| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase [Magnetospirillum magnetotacticum MS-1] Length = 450 Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 160/326 (49%), Positives = 223/326 (68%), Gaps = 2/326 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P W GRVIN G+P+DG L GD++ + ++ P A +R RV G+R ++ Sbjct: 95 VYPDRGWLGRVINGFGEPVDGLGPLPGGDIAYPVKAQPPSAHSRTRVSGKIDLGLRSVNA 154 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 F C GQR+G+FAGSG+GKS+++SM AR+ D ++ L+GERGRE REFIED LG + Sbjct: 155 FLTCCRGQRMGIFAGSGVGKSSIMSMMARNTSADIAVLGLIGERGREAREFIEDDLGPEG 214 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +K+SVVVV+TSDESP+LR+ A +T+AEYF +G +VL ++DS+TRFA + REI+ ++ Sbjct: 215 MKRSVVVVSTSDESPLLRRQAAYMTLTVAEYFRDQGLDVLCMMDSVTRFAMAQREISLSA 274 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P ++GY +VF+ELPRLLER GP KG+IT + +VLVD D+HN+PIAD+VR ILD Sbjct: 275 GEPPASKGYTPTVFAELPRLLERAGPGTG-KGSITGLFTVLVDADDHNEPIADAVRGILD 333 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+RS+AE GRYP ++ L SVSR + E LV L+ +E+ ++ +G Sbjct: 334 GHIVLDRSIAERGRYPAINILRSVSRTMPGCNNQQENDLVRRARALLSTYEDMAELIRLG 393 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 YR G D +D+A+H P I FL Q Sbjct: 394 AYRRGTDPKVDEAIHYYPAIEAFLGQ 419 >gi|307944615|ref|ZP_07659955.1| flagellar protein export ATPase FliI [Roseibium sp. TrichSKD4] gi|307772364|gb|EFO31585.1| flagellar protein export ATPase FliI [Roseibium sp. TrichSKD4] Length = 441 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 160/341 (46%), Positives = 224/341 (65%), Gaps = 1/341 (0%) Query: 87 VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146 V H + PS W GRVINA+G+PIDG L +G+ + + PPA R RV Sbjct: 84 VIHARESVVHPSDAWLGRVINAMGEPIDGKGELPRGEAPRWMRAAPPPASERARVGPPLD 143 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206 G+R ++ F C GQR+G+FAGSG+GKS L+SM AR+ D +I L+GERGREV+EFI Sbjct: 144 LGVRALNTFVTCCQGQRMGIFAGSGVGKSVLMSMLARNTDCDISVIGLIGERGREVQEFI 203 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 ED LG+ L +SVVVVATSDES ++R+ A +T+AE+F +G NVL ++DSITRFA + Sbjct: 204 EDDLGEEGLARSVVVVATSDESVLMRRQAAYLTMTMAEHFRDEGQNVLCMMDSITRFAMA 263 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 REI + GE P ++GY +VF+ELPRLLER GP KG+IT + +VLV+GDNHN+P+A Sbjct: 264 QREIGLSIGEPPTSKGYTPTVFTELPRLLERAGPGLVGKGSITGLFTVLVEGDNHNEPVA 323 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 D+VR ILDGH+V+ RS+AE GRYP ++ L SVSR + + + ++ L+ + + Sbjct: 324 DAVRGILDGHVVMERSIAERGRYPAINVLKSVSRTMPRCVPEEYQPILRKAKQLLSTYTD 383 Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 ++ +G YR G D +D+A+ + I FL Q + +S Sbjct: 384 MEELIRLGAYRKGSDATVDEAISRFEPIETFLNQRKGEATS 424 >gi|83591865|ref|YP_425617.1| flagellum-specific ATP synthase [Rhodospirillum rubrum ATCC 11170] gi|83574779|gb|ABC21330.1| ATPase FliI/YscN [Rhodospirillum rubrum ATCC 11170] Length = 475 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 158/330 (47%), Positives = 227/330 (68%), Gaps = 1/330 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 I P+ W GRVINA+G+ +DG +L G+ ++ I + P A +RQRV G+R I+ Sbjct: 95 IYPTRDWLGRVINAMGEAVDGKGALPAGERAVAIRGRPPSAHSRQRVGGKLDLGVRAINT 154 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213 F C GQR+G+FAGSG+GKS+++SMF R+ D +++ LVGERGRE REFIED LG+ Sbjct: 155 FLTCCRGQRMGIFAGSGVGKSSVMSMFIRNTNADVIVMGLVGERGREAREFIEDDLGEEG 214 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 LK++V VVATSDESP++R+ A + +AEYF +G +VL ++DS+TRFA + REI+ ++ Sbjct: 215 LKRAVTVVATSDESPLMRRQAAYMTLAVAEYFRDQGLDVLCLMDSVTRFAMAQREISLSA 274 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P ++GY +VF+ELP+LLER GP + G+IT + +VLV+GD+HN+PI+D+VR ILD Sbjct: 275 GEPPASKGYTPTVFAELPKLLERAGPGVEGSGSITGLFTVLVEGDDHNEPISDAVRGILD 334 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R++AE GRYP ++ L SVSR S E LV+ L+ +E ++ +G Sbjct: 335 GHIVLDRAIAERGRYPAINILRSVSRTMPGCNSPAENALVAKGRRLMAAYENMAELIRLG 394 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 YR G D D A+H P + FL Q+ ++ Sbjct: 395 AYRKGSDPETDTAIHYHPALDAFLTQAKTE 424 >gi|288962371|ref|YP_003452666.1| flagellum-specific ATP synthase [Azospirillum sp. B510] gi|288914637|dbj|BAI76122.1| flagellum-specific ATP synthase [Azospirillum sp. B510] Length = 445 Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 166/400 (41%), Positives = 247/400 (61%), Gaps = 3/400 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82 G +++++ + V + + + +G + + ++ + +V+ P G + + Sbjct: 22 GRVTAVSGLMVEVGGIEKELSVGGRCIVETRDRRRVPCEVVGFRQGRALAMPFGALDGVG 81 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 LG G + I P+ W GRV+NALG+P+DG L KG I + P A +R RV Sbjct: 82 LGCRALVAGDQAMIYPTDAWLGRVVNALGEPVDGKGPLPKGPQGTPIRNTPPNAHSRARV 141 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 + GIR I+ F C GQR+G+FAGSG+GKS+++SM AR + +I L+GERGRE Sbjct: 142 GEKLDLGIRAINAFLTCCRGQRMGIFAGSGVGKSSVMSMLARFSAAEVAVIGLIGERGRE 201 Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 ++EFI + LG+ L +SVVV ATSDE+P++RK A + +AE+F +G +VL ++DS+T Sbjct: 202 LQEFITEDLGEEGLARSVVVCATSDEAPLMRKQAAYMTLAVAEHFRDQGRDVLCMMDSVT 261 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RFA + REI ++GE P +GYP +VF+ELPRLLER GP G IT + +VLVDGD+H Sbjct: 262 RFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERAGPGVVGSGTITGLFTVLVDGDDH 321 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 N+PIAD+VR ILDGHIV+ R + E GRYP ++ L SVSR +A+E +LV L+ Sbjct: 322 NEPIADAVRGILDGHIVMERQIGERGRYPAINILRSVSRTMPGCNTANENELVGHARRLL 381 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 ++ ++ +G YR G D +D+A+H P + FLKQ Sbjct: 382 SSYDNMAEMIRLGAYRRGTDPQVDEAIHFQPALEAFLKQG 421 >gi|83309727|ref|YP_419991.1| flagellum-specific ATP synthase [Magnetospirillum magneticum AMB-1] gi|82944568|dbj|BAE49432.1| Flagellar biosynthesis/type III secretory pathway ATPase [Magnetospirillum magneticum AMB-1] Length = 450 Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 159/333 (47%), Positives = 226/333 (67%), Gaps = 2/333 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P W GRVIN G+P+DG L GD + + ++ P A +R RV G+R ++ Sbjct: 95 VFPDRGWLGRVINGFGEPVDGLGPLPGGDTAYPVKAQPPSAHSRSRVSGKIDLGLRSVNA 154 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 F C GQR+G+FAGSG+GKS+L+SM AR+ D ++ L+GERGRE REFIED LG + Sbjct: 155 FLTCCRGQRMGIFAGSGVGKSSLMSMMARNTSADISVLGLIGERGREAREFIEDDLGPEG 214 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +K+SVVVV+TSDESP++R+ A +T+AE+F +G +VL ++DS+TRFA + REI+ ++ Sbjct: 215 MKRSVVVVSTSDESPLMRRQAAYMTLTVAEFFRDQGLDVLCMMDSVTRFAMAQREISLSA 274 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P ++GY +VF+ELPRLLER GP KG+IT + +VLVD D+HN+PIAD+VR ILD Sbjct: 275 GEPPASKGYTPTVFAELPRLLERAGPGVG-KGSITGLFTVLVDADDHNEPIADAVRGILD 333 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+RS+AE GRYP ++ L SVSR + E LV L+ +E+ ++ +G Sbjct: 334 GHIVLDRSIAERGRYPAINILRSVSRTMPGCNNQQENDLVRRARSLLSTYEDMAELIRLG 393 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 YR G D +D+A+H P I FL Q ++ ++ Sbjct: 394 AYRRGTDPKVDEAIHYYPAIEAFLGQLKTEATT 426 >gi|288962705|ref|YP_003452999.1| flagellum-specific ATP synthase [Azospirillum sp. B510] gi|288914971|dbj|BAI76455.1| flagellum-specific ATP synthase [Azospirillum sp. B510] Length = 447 Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 171/349 (48%), Positives = 231/349 (66%), Gaps = 4/349 (1%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 F + P W GRV+NALG+PIDG L G+ + P A R+RV + +GIRVI Sbjct: 92 FTLRPGQGWLGRVVNALGEPIDGKGPLANGEHPRALRQPPPAACARRRVGRRIDSGIRVI 151 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211 D F PLC GQR+GVFAGSG+GKSTLL+M AR D ++I L+GERGREVREFI+D LG Sbjct: 152 DGFVPLCRGQRLGVFAGSGVGKSTLLAMVARHAEADTIVIGLIGERGREVREFIQDDLGP 211 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 + L +SVV+VATSDE P++R+ A L +T+AE +G +VL ++DS+TRFA + REI Sbjct: 212 EGLARSVVIVATSDEPPLMRRQAALLTMTVAEEMRDQGKHVLCLMDSVTRFAMAQREIGL 271 Query: 272 NSGELPVARGYPTSVFSELPRLLERI--GPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE P A+ YP SVF+ELPRLLER GP +G+ITA+ +VLVDGD+H++PIAD+VR Sbjct: 272 AAGEPPTAKSYPPSVFAELPRLLERAGPGPEGVGEGDITAIFTVLVDGDDHDEPIADAVR 331 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 ILDGH+VL+R +AE+GRYP V+ L SVSR +E ++V L ++ +++ Sbjct: 332 GILDGHLVLDRGIAEQGRYPAVNLLRSVSRSLPGCHGVEENRIVGRTRALAATYDGMKEM 391 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS-SEDVFQEITKKL 437 +G Y+ G D D A+ P + +FL+Q D S S D F + L Sbjct: 392 IRLGAYKRGTDPETDAAIDLHPRLEEFLRQGKDDPSPSADSFTRLESLL 440 >gi|83944173|ref|ZP_00956629.1| flagellum-specific ATP synthase [Sulfitobacter sp. EE-36] gi|83845040|gb|EAP82921.1| flagellum-specific ATP synthase [Sulfitobacter sp. EE-36] Length = 463 Score = 318 bits (816), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 171/404 (42%), Positives = 247/404 (61%), Gaps = 6/404 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G + SIT + TV+ L +G G+V+ + + P G E +S+ Sbjct: 22 GTVRSITGMTLTVSGLEAMAAIGSQCRVYTPAGHIDGEVVSAQGSDLCVLPFGTWEGVSV 81 Query: 84 G---DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 G +L+ H +SP W G V++ALG+P+ + + P A +R++ Sbjct: 82 GNTVELIEH--DDMVSPDDSWIGTVVDALGRPLTQYTRARRPRRKTRFRANPPGAFDRKK 139 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 V + +T I+ IDIFTP+C GQR+GVFAGSG+GKST+++M AR+ D ++I L+GERGR Sbjct: 140 VGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKSTMMAMLARNTDADVIVIGLIGERGR 199 Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV++FI++ LG+ + ++VVVV+T DE+P+LRK A LT IAEYF S G VLL+LDS+ Sbjct: 200 EVQQFIQEDLGEEGMARAVVVVSTGDEAPLLRKQAALTTTAIAEYFKSTGKQVLLLLDSV 259 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA + REI GE P RGYP SVFSELP LLER GP +G+IT + +VLVDGD+ Sbjct: 260 TRFAMAQREIGLARGEPPTLRGYPPSVFSELPHLLERAGPGMAAEGDITGLYTVLVDGDD 319 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 N+PIAD+VR I+DGH+VL+R +AE+GR+P +D S+SR+ S +E ++ Sbjct: 320 MNEPIADAVRGIVDGHLVLDRRIAEQGRFPAIDLQKSLSRMLPGCHSPEEYEITKVARKA 379 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 + R+ + D+ +G Y+ G D D+A+ FL QS D Sbjct: 380 LGRYADMEDLIRLGAYKAGSDPETDQAITFFQAASPFLSQSRGD 423 >gi|296283215|ref|ZP_06861213.1| flagellum-specific ATP synthase [Citromicrobium bathyomarinum JL354] Length = 442 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 162/338 (47%), Positives = 227/338 (67%), Gaps = 3/338 (0%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G+ + P+ W GRV++ LG+P+D L G + + P A NR RV + +TG+R Sbjct: 89 GQSMLRPTDQWLGRVVDGLGRPMDDKGPLPVGPEARLFKADPPAAANRTRVGRRLETGVR 148 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 +D+F PLC GQR+G+FAGSG+GKSTLLSM AR D +I L+GERGREV+EFIED L Sbjct: 149 SLDLFAPLCRGQRLGLFAGSGVGKSTLLSMLARWVETDIAVIGLIGERGREVQEFIEDDL 208 Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G + L +SVVVVATSD ++R+ A T + IAE+F G +V+ ++DS+TRFA + REI Sbjct: 209 GPEGLARSVVVVATSDSPALMRRQAAWTTLAIAEHFRDAGRDVMCLMDSVTRFAMAQREI 268 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE P +GY +VF+ELPRLLER GP +G+IT + SVLVDGD+H++PIAD+VR Sbjct: 269 GLANGEPPATKGYTPTVFAELPRLLERAGPGGPGQGSITGLFSVLVDGDDHDEPIADAVR 328 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL-VSSLTHLIHRFEETRD 388 ILDGHIV++R +AE GR+P +D L SVSR+ +E +L +++L HL + + + + Sbjct: 329 GILDGHIVMSRKIAERGRFPAIDILKSVSRMLPDCHEEEENRLRLAALRHLSN-YADMEE 387 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + +G Y+ G D +D+A+ P I D LKQ D S Sbjct: 388 LVRLGAYKSGSDAEVDEAIRLAPAIEDLLKQRKDDRGS 425 >gi|85713633|ref|ZP_01044623.1| flagellum-specific ATP synthase [Nitrobacter sp. Nb-311A] gi|85699537|gb|EAQ37404.1| flagellum-specific ATP synthase [Nitrobacter sp. Nb-311A] Length = 441 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 157/350 (44%), Positives = 235/350 (67%), Gaps = 6/350 (1%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ P+A W GRV+NA+G+PIDG L +G + + PPA +R+RV + G+R ++ Sbjct: 90 QVRPAASWLGRVLNAMGEPIDGKGPLPQGPAPVPYRNSPPPAHSRKRVGEPLDLGVRALN 149 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 F C GQR+G+FAGSG+GKS LLSM AR+ D +I LVGERGREV+EF++D LG + Sbjct: 150 TFLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADISVIGLVGERGREVQEFLQDDLGEE 209 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSDE ++R+ A + +AEYF +G +V+ ++DS+TRFA + REI + Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDEGQDVMCMMDSVTRFAMAQREIGLS 269 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P +GY +VF+ELPRLLER GP E G IT + +VLVDGD+HN+P+AD+VR IL Sbjct: 270 TGEPPTTKGYTPTVFTELPRLLERAGPGSGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIV+ R +AE GRYP ++ L SVSR K+ +++ ++ + + ++ + Sbjct: 329 DGHIVMERVIAERGRYPAINILKSVSRTMPKSADPAFLPVITRARQMMATYSDMEELIRL 388 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVF---QEITKKLQ 438 G YR G + +D+A+ P++ DFL+Q+ +++ E+ + Q+I K L+ Sbjct: 389 GAYRAGSNAEVDEAIRLNPVLEDFLRQAKDEVTGIEEGYRRLQQIVKTLE 438 >gi|315497639|ref|YP_004086443.1| atpase, flii/yscn family [Asticcacaulis excentricus CB 48] gi|315415651|gb|ADU12292.1| ATPase, FliI/YscN family [Asticcacaulis excentricus CB 48] Length = 462 Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 160/375 (42%), Positives = 236/375 (62%), Gaps = 7/375 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ D + P G E ++ G ++ ++ PS W GR+I+A G PIDG L Sbjct: 75 EVVGFREDRALMMPFGPVEGVAPGAEIRISNEGAKVYPSTAWLGRIIDAFGDPIDGLGPL 134 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 KG + + + PPA +R RV + G+R +++FT C GQR+GVFAGSG+GKS LLS Sbjct: 135 PKGGIGYPLKAAPPPAHSRARVGERLDLGVRAMNVFTTCCRGQRLGVFAGSGVGKSVLLS 194 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238 M AR D V++ L+GERGREVREF+E+ LG+ + +++VVVATSDE + R+ A Sbjct: 195 MLAREAACDAVVVGLIGERGREVREFVEETLGEAGISRAIVVVATSDEPALKRRQAAYMT 254 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 + ++E+ +G VL ++DS+TRFA + REI +GE P +GY + F+ELP+LLER G Sbjct: 255 LALSEFLRDQGLEVLCLMDSVTRFAMAQREIGLATGEPPTTKGYTPTCFAELPKLLERAG 314 Query: 299 PSE-----KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 P + G IT + +VLVDGD+HN+PIAD+VR ILDGHIV++RS+AE GR+P +D Sbjct: 315 PGPLLPDGTQTGPITGLFTVLVDGDDHNEPIADAVRGILDGHIVMSRSIAERGRFPAIDV 374 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 L S+SR + E+++V + ++ + ++ IG YR G D ++D+A+ P I Sbjct: 375 LKSISRTMPGCQTLAEREVVRNARAVMSAYTNMEELIRIGAYRTGADPLVDRAIQLNPSI 434 Query: 414 YDFLKQSPSDLSSED 428 FL QSP + +S D Sbjct: 435 EQFLSQSPDEATSLD 449 >gi|328542575|ref|YP_004302684.1| H+-transporting two-sector ATPase FliI [polymorphum gilvum SL003B-26A1] gi|326412321|gb|ADZ69384.1| H+-transporting two-sector ATPase FliI [Polymorphum gilvum SL003B-26A1] Length = 441 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 155/333 (46%), Positives = 221/333 (66%), Gaps = 1/333 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+ W GRVINA+G+PIDG +L G+ + S PPA R RV G+R ++ Sbjct: 92 VHPANAWLGRVINAMGEPIDGKGALPGGETPRRLRSAPPPASERARVGPPLDLGVRALNT 151 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213 F C GQR+G+FAGSG+GKS L+SM AR+ D +I L+GERGREV+EFIED LG+ Sbjct: 152 FVTCCEGQRMGIFAGSGVGKSVLMSMLARNTDCDVAVIGLIGERGREVQEFIEDDLGEAG 211 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L +SVVVVATSDES ++R+ A A+T+AE+F +G VL ++DS+TRFA + REI + Sbjct: 212 LARSVVVVATSDESVLMRRQAAYLAMTVAEHFRDEGAKVLCMMDSVTRFAMAQREIGLSI 271 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P ++GY +VF+ELPRLLER GP G+IT + +VLV+GDNHN+P+AD+VR ILD Sbjct: 272 GEPPTSKGYTPTVFTELPRLLERAGPGRVGSGSITGLFTVLVEGDNHNEPVADAVRGILD 331 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GH+V+ RS+AE GRYP ++ L SVSR + ++ L+ F + ++ +G Sbjct: 332 GHVVMERSIAERGRYPAINVLKSVSRTMPRCVPEPLVPVLRKARQLMATFSDMEELIRLG 391 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 YR G D ++D+A+ + + FL Q+ + ++ Sbjct: 392 AYRRGSDPVVDEAIARHDALEGFLSQTKDEATA 424 >gi|75674724|ref|YP_317145.1| flagellum-specific ATP synthase [Nitrobacter winogradskyi Nb-255] gi|74419594|gb|ABA03793.1| ATPase FliI/YscN [Nitrobacter winogradskyi Nb-255] Length = 441 Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 158/347 (45%), Positives = 234/347 (67%), Gaps = 11/347 (3%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+A W GRV+NALG+PIDG L +G + + P A +RQRV + +R ++ Sbjct: 91 VRPAAAWLGRVLNALGEPIDGKGPLPQGPTPVPYRNSPPSAHSRQRVGQPLDLKVRALNT 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213 F C GQR+G+FAGSG+GKS LLSM AR+ D +I L+GERGREV+EF++D LGD Sbjct: 151 FLTCCRGQRLGIFAGSGVGKSVLLSMLARNADADVSVIGLIGERGREVQEFLQDDLGDEG 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L +SVVVVATSDE ++R+ A + IAE+F +G +V+ ++DS+TRFA + REI ++ Sbjct: 211 LARSVVVVATSDEPALMRRQAAYLTLAIAEFFRDEGRDVMCMMDSVTRFAMAQREIGLST 270 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GY +VF+ELPRLLER GP +KG IT + +VLVDGD+HN+P+AD+VR ILD Sbjct: 271 GEPPTTKGYTPTVFTELPRLLERAGPG-ADKGTITGIFTVLVDGDDHNEPVADAVRGILD 329 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRL----ADKAWSADEKKLVSSLTHLIHRFEETRDI 389 GHIV+ R++AE GRYP ++ L SVSR AD A+ D ++ ++ + + ++ Sbjct: 330 GHIVMERAIAERGRYPAINILKSVSRTMPRSADPAFLPD----ITCARRMMATYSDMEEL 385 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITK 435 +G YR G + +D+A+ P++ DFL+Q+ +++S ED ++ + + Sbjct: 386 IRLGAYRAGSNAEVDEAIRLNPVLEDFLRQAKDEVTSIEDGYRRLQQ 432 >gi|91978136|ref|YP_570795.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisB5] gi|91684592|gb|ABE40894.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB5] Length = 441 Score = 312 bits (800), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 155/334 (46%), Positives = 225/334 (67%), Gaps = 2/334 (0%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ PS W GRVINALG+PIDG L +G M + PPA +R+RV G+R ++ Sbjct: 90 QVRPSPAWLGRVINALGEPIDGKGPLPQGASPMPFRNSPPPAHSRKRVGAPLDLGVRALN 149 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 F C GQR+G+FAGSG+GKS LLSM AR+ +I L+GERGREV+EF++D LG + Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 209 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSDE ++R+ A ++IAEYF +G +VL ++DS+TRFA + REI + Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLSIAEYFRDEGKDVLCLMDSVTRFAMAQREIGLS 269 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A+GY +VF+ELP+LLER GP +E G I+ + +VLVDGD+HN+P+AD+VR IL Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLRE-GTISGIFTVLVDGDDHNEPVADAVRGIL 328 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIV+ RS+AE GRYP ++ L SVSR ++ ++ ++ + + ++ + Sbjct: 329 DGHIVMQRSIAERGRYPAINVLKSVSRTMPRSADPAYLPVIKRARQVMATYADMEELIRL 388 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 G YRPG + +D+AV + +FL+Q+ + +S Sbjct: 389 GAYRPGSSVEVDEAVRLHEPLEEFLRQAKDEATS 422 >gi|254473200|ref|ZP_05086598.1| flagellar-specific H(+)-transporting ATP synthase [Pseudovibrio sp. JE062] gi|211957921|gb|EEA93123.1| flagellar-specific H(+)-transporting ATP synthase [Pseudovibrio sp. JE062] Length = 373 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 155/340 (45%), Positives = 225/340 (66%), Gaps = 3/340 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + PS+ W GRV+NALG+PIDG L G + ++ PPA R RV G+R ++ Sbjct: 24 VHPSSGWLGRVVNALGEPIDGKGPLPFGSIPRKLRDSPPPAAERARVGGPIDLGVRSLNS 83 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213 F C GQR+G+FAGSG+GKS L+SM AR+ + +I L+GERGREV+EFIED LG+ Sbjct: 84 FVTCCQGQRLGIFAGSGVGKSVLMSMLARNAETEVSVIGLIGERGREVQEFIEDDLGEEG 143 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L KSVVVVATSDES ++R+ A +T++EYF +G NVL ++DS+TRFA + REI + Sbjct: 144 LAKSVVVVATSDESVLMRREAAYLTLTLSEYFRDEGKNVLCMMDSVTRFAMAQREIGLSV 203 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P ++GY +VF+ELP+LLER GP KG++TA+ +VLV+GDNHN+P+AD+VR ILD Sbjct: 204 GEPPTSKGYTPTVFTELPKLLERAGPGAVGKGSVTALFTVLVEGDNHNEPVADAVRGILD 263 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIV+ R +AE GRYP ++ L SVSR + + ++ L+ + + ++ +G Sbjct: 264 GHIVMERQIAERGRYPAINVLKSVSRTMPRCVPEEALPILRRAKQLMSAYADMEELIRLG 323 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS--EDVFQ 431 Y+ G D ++D+A+ + + +L Q + ++ E FQ Sbjct: 324 AYKEGADPLVDEAIAKYDALEAYLGQMKGEKTTIEEGYFQ 363 >gi|83955127|ref|ZP_00963783.1| Flagellum-specific ATP synthase [Sulfitobacter sp. NAS-14.1] gi|83840456|gb|EAP79629.1| Flagellum-specific ATP synthase [Sulfitobacter sp. NAS-14.1] Length = 434 Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 162/365 (44%), Positives = 234/365 (64%), Gaps = 6/365 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLG---DLVFHWGRFRISPSACWCGRVINALGKPIDGD 116 G+V+ + + P G E +S+G +L+ H +SP W G V++ALG+P+ Sbjct: 29 GEVVSAQGSDLCVLPFGTWEGVSVGNTVELIEH--DDMVSPDDSWIGTVVDALGRPLTQY 86 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + P A +R++V + +T I+ IDIFTP+C GQR+GVFAGSG+GKST Sbjct: 87 TRARRPRRKTRFRANPPGAFDRKKVGEKLETQIKCIDIFTPICRGQRMGVFAGSGVGKST 146 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAP 235 +++M AR+ D ++I L+GERGREV++FI++ LG+ + ++VVVV+T DE+P+LRK A Sbjct: 147 MMAMLARNTDADVIVIGLIGERGREVQQFIQEDLGEEGMARAVVVVSTGDEAPLLRKQAA 206 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT IAEYF S G VLL+LDS+TRFA + REI GE P RGYP SVFSELP LLE Sbjct: 207 LTTTAIAEYFKSTGKQVLLLLDSVTRFAMAQREIGLARGEPPTLRGYPPSVFSELPHLLE 266 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R GP +G+IT + +VLVDGD+ N+PIAD+VR I+DGH+VL+R +AE+GR+P +D Sbjct: 267 RAGPGMAAEGDITGLYTVLVDGDDMNEPIADAVRGIVDGHLVLDRRIAEQGRFPAIDLQK 326 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR+ S +E ++ + R+ + D+ +G Y+ G D D+A+ Sbjct: 327 SLSRMLPGCHSPEEYEISKVARKALGRYADMEDLIRLGAYKAGSDPETDQAITFFRAASP 386 Query: 416 FLKQS 420 FL QS Sbjct: 387 FLSQS 391 >gi|39934703|ref|NP_946979.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris CGA009] gi|192290219|ref|YP_001990824.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris TIE-1] gi|39648553|emb|CAE27074.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris CGA009] gi|192283968|gb|ACF00349.1| flagellar protein export ATPase FliI [Rhodopseudomonas palustris TIE-1] Length = 441 Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 165/381 (43%), Positives = 236/381 (61%), Gaps = 3/381 (0%) Query: 48 FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVI 106 VV G N + +VI + + P E + G + ++ PS W GRV+ Sbjct: 43 IVVETGANREIPCEVIGFTGNNAIVMPFAGLEGVRRGCRAIIANSAAQVRPSPHWLGRVV 102 Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 NALG+PIDG L +G M+ ++ PPA +R+RV G+R ++ F C GQR+G+ Sbjct: 103 NALGEPIDGKGPLVQGPSPMQFRNQPPPAHSRKRVGMPLDLGVRALNTFLTCCRGQRMGI 162 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSD 225 FAGSG+GKS LLSM AR+ +I L+GERGREV+EF++D LG + L +SVVVVATSD Sbjct: 163 FAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEEGLARSVVVVATSD 222 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 E ++R+ A + IAEYF +VL ++DS+TRFA + REI ++GE P A+GY + Sbjct: 223 EPALMRRQAAYLTLAIAEYFRDNDKDVLCLMDSVTRFAMAQREIGLSAGEPPTAKGYTPT 282 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VF+ELP+LLER GP E G IT + +VLVDGD+HN+P+AD+VR ILDGHIV+ RS+AE Sbjct: 283 VFTELPKLLERAGPGLGE-GTITGIFTVLVDGDDHNEPVADAVRGILDGHIVMQRSIAER 341 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 GRYP ++ L SVSR K+ ++ ++ + + ++ +G YRPG +D+ Sbjct: 342 GRYPAINVLKSVSRTMPKSADPVYLPMIKRARQIMATYADMEELIRLGAYRPGSSAEVDE 401 Query: 406 AVHQVPIIYDFLKQSPSDLSS 426 AV + DFL+Q + +S Sbjct: 402 AVRLHEPLEDFLRQGKDEATS 422 >gi|209965046|ref|YP_002297961.1| flagellum-specific ATP synthase [Rhodospirillum centenum SW] gi|209958512|gb|ACI99148.1| H+-transporting two-sector ATPase FliI [Rhodospirillum centenum SW] Length = 447 Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 159/367 (43%), Positives = 231/367 (62%), Gaps = 3/367 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + P G ++I LG G+ I+P+ W GRV+NALG+PIDG L Sbjct: 60 EVVGFRAGKALLMPFGTLDDIGLGCRAEVAEGQPAITPTTGWLGRVVNALGEPIDGKGPL 119 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 +G I + PPA R+RV G+R I+ F C GQR+G+FAGSG+GKS L+S Sbjct: 120 PQGPRPTPIRASPPPAHARRRVGGKIDLGVRAINTFLTCCKGQRMGIFAGSGVGKSVLMS 179 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M A+ +I L+GERGREV+EF+E LG + L +SVVVVATSDE P++R+ A Sbjct: 180 MLAKYTAAQVSVIGLIGERGREVQEFLEADLGPEGLARSVVVVATSDEPPLMRRQAAYMT 239 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 + +AE+F +G +VL ++DS+TRFA + REI ++GE P +GYP +VF+ELPRLLER G Sbjct: 240 MAVAEFFRDEGQDVLCLMDSVTRFAMAQREIGLSAGEPPTTKGYPPTVFAELPRLLERAG 299 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P E G I+ + +VLV+G + +PIAD+VR ILDGHIV+ R + E GRYP ++ L SVS Sbjct: 300 PGTGE-GTISGLFTVLVEGGDMEEPIADAVRGILDGHIVMERRIGERGRYPAINILRSVS 358 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R + ++ LV+ L+ + + ++ +G YR G D ++D+A+H P + +FL+ Sbjct: 359 RTMPGCNTEEQNLLVTRARRLMAAYADMEEMIRLGAYRRGSDSMVDEAIHFQPALENFLR 418 Query: 419 QSPSDLS 425 Q + S Sbjct: 419 QGKDERS 425 >gi|220923531|ref|YP_002498833.1| flagellum-specific ATP synthase [Methylobacterium nodulans ORS 2060] gi|219948138|gb|ACL58530.1| ATPase FliI/YscN [Methylobacterium nodulans ORS 2060] Length = 453 Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 161/333 (48%), Positives = 219/333 (65%), Gaps = 2/333 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 I PS W GRVI+ALG+PIDG L G ++ + + PPA R+RV G+R I+ Sbjct: 107 IRPSRAWLGRVIDALGRPIDGLGPLPPGPVAYPLQTDPPPAHARRRVGPPLDLGVRCINT 166 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 F LC GQR+G+FAGSG+GKS LLSM ARS D +I LVGERGREV+EF++D LG + Sbjct: 167 FLTLCRGQRMGIFAGSGVGKSVLLSMLARSAASDVAVIGLVGERGREVQEFLQDDLGPEG 226 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L +SVVVVATSDE ++R+ A + +AE+F +G VL ++DSITRFA + R++ + Sbjct: 227 LARSVVVVATSDEPALMRRNAAYATLALAEHFRDEGAQVLCMIDSITRFAMAQRDVGLAA 286 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P A+GY +VFSELPRLLER GP E G I+ + +VLV+GD+HN+P+AD+VR ILD Sbjct: 287 GEPPTAKGYTPTVFSELPRLLERAGPGTGE-GMISGLFTVLVEGDDHNEPVADAVRGILD 345 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIV+ R +AE GRYP ++ L SVSR +A +V HL+ + ++ +G Sbjct: 346 GHIVMERRIAERGRYPAINVLRSVSRTMPRACDPAFLPVVQRARHLMSTHADMEELIRLG 405 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 YR G +D+AV +P + FL QS + +S Sbjct: 406 AYRAGSSPEVDEAVALMPDLEAFLGQSKEEATS 438 >gi|152965619|ref|YP_001361403.1| ATPase, FliI/YscN family [Kineococcus radiotolerans SRS30216] gi|151360136|gb|ABS03139.1| ATPase, FliI/YscN family [Kineococcus radiotolerans SRS30216] Length = 453 Score = 308 bits (790), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 157/327 (48%), Positives = 218/327 (66%), Gaps = 4/327 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ALG P+DG L + + PPAM R RV+ G+R +D P Sbjct: 110 ALLGRVVDALGNPLDGGPPLHTAPRG-PLHATPPPAMTRGRVDAPLSLGVRALDTLVPAG 168 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR G+FAGSG+GKS+LLSM AR D +++LVGERGREVREF+ED LG + L +SV Sbjct: 169 RGQRFGIFAGSGVGKSSLLSMIARGTSADVSVLALVGERGREVREFLEDDLGPEGLARSV 228 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV+ATSDE+P+LR A LTA T+AE F G + +L++DS+TR A + REI + GE P Sbjct: 229 VVIATSDEAPVLRLRASLTATTVAESFRDMGADCVLMMDSLTRVAMAQREIGLSVGEPPA 288 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGYP SVF+ +PRLLER GP G+IT + +VLVDGD+HN+PIAD+ RSILDGH+VL Sbjct: 289 TRGYPPSVFALMPRLLERAGPGVT--GSITGIYTVLVDGDDHNEPIADNARSILDGHVVL 346 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LA G +P +D L SVSR+A + + ++K ++L ++ + +++ +G Y+PG Sbjct: 347 DRRLATAGHFPTIDVLESVSRVAGRVTTPEQKSAATALRRVMAAHRDAKELIDVGAYQPG 406 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLS 425 + +D AV Q+P I FL+Q D++ Sbjct: 407 ANPEVDAAVAQLPAINAFLRQDIHDIT 433 >gi|90425705|ref|YP_534075.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisB18] gi|90107719|gb|ABD89756.1| ATPase FliI/YscN [Rhodopseudomonas palustris BisB18] Length = 441 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 153/334 (45%), Positives = 220/334 (65%), Gaps = 2/334 (0%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ PS W GRV+NA+G+PIDG L +G M + PPA +R+RV G+R ++ Sbjct: 90 QVRPSPSWLGRVLNAMGEPIDGKGPLTQGTSPMTFRNAPPPAHSRKRVGAPLDLGVRALN 149 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212 F C GQR+G+FAGSG+GKS LLSM AR+ D +I LVGERGREV+EF++D LGD Sbjct: 150 TFLTCCRGQRLGIFAGSGVGKSVLLSMLARNVDADVSVIGLVGERGREVQEFLQDDLGDE 209 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 + +SVVVVATSDE ++R+ A + I+EYF G +VL ++DS+TRFA + REI + Sbjct: 210 GMARSVVVVATSDEPALMRRQAAYLTLAISEYFRDDGKDVLCLMDSVTRFAMAQREIGLS 269 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A+GY +VF+ELP+LLER GP E G IT + +VLVDGD+HN+P+AD+VR IL Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLNE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIV+ R++AE GRYP ++ L SVSR K+ ++ ++ + + ++ + Sbjct: 329 DGHIVMERAIAERGRYPAINILKSVSRTMPKSADPAYLPIIRRARQIMGTYADMEELIRL 388 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 G YR G +D+A+ + DFL+Q + ++ Sbjct: 389 GAYRAGSSPEVDEAIRLHQPLEDFLRQGKEEATA 422 >gi|115526263|ref|YP_783174.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris BisA53] gi|115520210|gb|ABJ08194.1| flagellar protein export ATPase FliI [Rhodopseudomonas palustris BisA53] Length = 441 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 152/334 (45%), Positives = 223/334 (66%), Gaps = 2/334 (0%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ PSA W GRV+NA+G+PIDG L +G M+ + PPA +R+RV G+R ++ Sbjct: 90 QVRPSAAWLGRVLNAMGEPIDGKGPLSQGPSPMQFRNAPPPAHSRKRVGAPLDLGVRALN 149 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 F C GQR+G+FAGSG+GKS LLSM AR+ D +I LVGERGREV+EF++D LG + Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDADVSVIGLVGERGREVQEFLQDDLGEE 209 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSDE ++R+ A + IAEYF + +VL ++DS+TRFA + REI + Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAIAEYFRDEEKDVLCLMDSVTRFAMAQREIGLS 269 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A+GY +VF+ELP+LLER GP +E G IT + +VLVDGD+HN+P+AD+VR IL Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLRE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIV+ R++AE GRYP ++ L SVSR K+ ++ ++ + + ++ + Sbjct: 329 DGHIVMERAIAERGRYPAINILKSVSRTMPKSADPAYLPIIKRARQIMGTYSDMEELIRL 388 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 G YR G +D+++ + ++L+Q + +S Sbjct: 389 GAYRAGSSPEVDESIQLHEPLENYLRQGKGEATS 422 >gi|126730140|ref|ZP_01745952.1| H+-transporting two-sector ATPase, flagellum-specific [Sagittula stellata E-37] gi|126709520|gb|EBA08574.1| H+-transporting two-sector ATPase, flagellum-specific [Sagittula stellata E-37] Length = 458 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 174/412 (42%), Positives = 252/412 (61%), Gaps = 5/412 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G ++++ V+ LS+ +GD + ++ G ++ G+V+RI D+V + P + E +S Sbjct: 22 GRVTAVDGTTIWVSGLSEVASIGDRLRLYHGAHTLG-GEVLRIRNDLVAMLPDEVAEGVS 80 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 GD V G ++P W GRVI+A G+P+DG LG G + PPA R+R+ Sbjct: 81 KGDRVAVLGPPTLAPCDSWIGRVIDAYGQPLDGA-PLGPGLKRRPFRASPPPAAARRRLG 139 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 TG+ V D P+ GQRIG+FAGSG+GKS LL+ A+ D V+++LVGERGREV Sbjct: 140 PRLSTGLSVFDTLLPIAQGQRIGLFAGSGVGKSRLLAQLAQGMQADVVVLALVGERGREV 199 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 +F+ LG + +K+S+VV ATSD SP+ R+ PL A+TIAE+F +G +VL + DSITR Sbjct: 200 LDFVTKVLGPEGMKRSIVVAATSDRSPLERRRCPLAAMTIAEHFRDQGKHVLYMADSITR 259 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + RE+A SGELP RG+P SV ++ RL ER G G+ITAV+SVLV G + Sbjct: 260 FAEAHREVAIASGELPALRGHPPSVAHQIMRLAERAGCGVDGSGDITAVLSVLVAGSDME 319 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD +R +LDGH+VL+R +AE GR+P +D L SVSR +A + E L+ + L+ Sbjct: 320 EPIADILRGVLDGHVVLDRQIAERGRFPAIDLLRSVSRSLPEAATEPENVLIGDVRQLLG 379 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 + + + G YR G D ILD+AV + DFL ++ S + FQ + Sbjct: 380 SYARSETMIRAGLYREGEDPILDQAVRAWADLDDFLAEA-SPAGPQRAFQRL 430 >gi|316935199|ref|YP_004110181.1| ATPase, FliI/YscN family [Rhodopseudomonas palustris DX-1] gi|315602913|gb|ADU45448.1| ATPase, FliI/YscN family [Rhodopseudomonas palustris DX-1] Length = 441 Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 156/334 (46%), Positives = 220/334 (65%), Gaps = 2/334 (0%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ PS W GRV+NALG+PIDG L +G M ++ PPA +R+RV G+R ++ Sbjct: 90 QVRPSPHWLGRVVNALGEPIDGKGPLVQGPSPMPFRNQPPPAHSRKRVGAPLDLGVRALN 149 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 F C GQR+G+FAGSG+GKS LLSM AR+ +I L+GERGREV+EF++D LG + Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 209 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSDE ++R+ A + IAEYF +VL ++DS+TRFA + REI + Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAIAEYFRDNDKDVLCLMDSVTRFAMAQREIGLS 269 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A+GY +VF+ELP+LLER GP E G IT + +VLVDGD+HN+P+AD+VR IL Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIV+ R++AE GRYP ++ L SVSR K+ L+ ++ + + ++ + Sbjct: 329 DGHIVMQRAIAERGRYPAINVLKSVSRTMPKSADPVYLPLIKRARQIMATYADMEELIRL 388 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 G YRPG +D+AV + DFL+Q + +S Sbjct: 389 GAYRPGSSAEVDEAVRLHEPLEDFLRQGKDEATS 422 >gi|218288297|ref|ZP_03492596.1| flagellar protein export ATPase FliI [Alicyclobacillus acidocaldarius LAA1] gi|218241656|gb|EED08829.1| flagellar protein export ATPase FliI [Alicyclobacillus acidocaldarius LAA1] Length = 441 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 176/405 (43%), Positives = 245/405 (60%), Gaps = 7/405 (1%) Query: 35 TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRF 93 T+ + LG+ S+ LG+VI + +Y+ P+G E+S G V F +F Sbjct: 34 TLEVVGPTASLGELCALGRDTSEGLGEVIGFHEGRLYVVPLGPLPEVSPGTPVRFLERQF 93 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 RI GRV+N LG+PID L + + + + R R+ + TG+R ID Sbjct: 94 RIRCGPGLVGRVLNGLGEPIDDRGHLDGPLVWRTVDAPAISPLRRGRISSPYATGVRAID 153 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212 + GQR+G+FAGSG+GKSTLLSM AR D +I+LVGERGREVREF+ED LG+ Sbjct: 154 ALLTIGRGQRVGLFAGSGVGKSTLLSMMARGGRADVHVIALVGERGREVREFLEDDLGEE 213 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 +++SVV+VATSDE +R A A IAEYF +G +V L++DS+TRFA + RE+ Sbjct: 214 GMRRSVVIVATSDEPAYVRSKASFVATAIAEYFRDEGMHVTLMMDSLTRFAMAEREVGLA 273 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE P +RGY SVF++LP LLER GP G ITAV +VLV+GD+ NDPIAD+VR IL Sbjct: 274 MGEPPSSRGYTPSVFAKLPVLLERAGPGPV--GAITAVYTVLVEGDDLNDPIADAVRGIL 331 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIVL+RSLA G++P +D L S+SRL D ++ + + R+ E D+ I Sbjct: 332 DGHIVLSRSLANRGQFPAIDVLQSLSRLFPSIADEDHRRAAERVREWMARYGEIEDLFRI 391 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 G YR G D +D+A+ ++P I +FL+Q + + F+E +L Sbjct: 392 GAYRQGTDPAVDEAIQRMPEILEFLRQKKGETVA---FEEAITQL 433 >gi|258511374|ref|YP_003184808.1| ATPase, FliI/YscN family [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478100|gb|ACV58419.1| ATPase, FliI/YscN family [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 441 Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 178/423 (42%), Positives = 254/423 (60%), Gaps = 9/423 (2%) Query: 17 KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76 ++LV + G + + + + + LG+ S+ LG+VI + +Y+ P+G Sbjct: 18 RHLVRRAGRVMRV--IGHMLEVAGPTASLGELCALGRDASEGLGEVIGFHEGRLYVVPLG 75 Query: 77 IGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 E+S G V F +FRI GRV+N LG+PID L + + + Sbjct: 76 PLPEVSPGTPVRFLERQFRIRCGPGLVGRVLNGLGEPIDDRGPLEGPLVWRTVDAPAISP 135 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 + R R+ + TG+R ID + GQR+G+FAGSG+GKSTLLSM AR D +I+LV Sbjct: 136 LRRGRISSPYATGVRAIDALLTIGRGQRVGLFAGSGVGKSTLLSMMARGGRADVHVIALV 195 Query: 196 GERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREVREF+ED LG+ +++SVV+VATSDES +R A A IAE+F +G +V L Sbjct: 196 GERGREVREFLEDDLGEEGMRRSVVIVATSDESAYVRSKAAFVATAIAEHFRDEGMHVTL 255 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DS+TRFA + RE+ GE P +RGY SVF++LP LLER GP G ITAV +VL Sbjct: 256 MMDSLTRFAMAEREVGLAMGEPPSSRGYTPSVFAKLPVLLERAGPGPV--GAITAVYTVL 313 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V+GD+ NDPIAD+VR ILDGHIVL+RSLA G++P +D L S+SRL D ++ Sbjct: 314 VEGDDLNDPIADAVRGILDGHIVLSRSLANRGQFPAIDVLQSLSRLFPSIADEDHRRAAE 373 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434 + + R+ E D+ IG YR G D +D+A+ ++P I +FL+Q + + F+E Sbjct: 374 RVREWMARYGEIEDLFRIGAYRQGTDPAVDEAIQRMPEILEFLRQKKGETVA---FEEAI 430 Query: 435 KKL 437 +L Sbjct: 431 TQL 433 >gi|295690883|ref|YP_003594576.1| ATPase, FliI/YscN family [Caulobacter segnis ATCC 21756] gi|295432786|gb|ADG11958.1| ATPase, FliI/YscN family [Caulobacter segnis ATCC 21756] Length = 467 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 153/351 (43%), Positives = 222/351 (63%), Gaps = 7/351 (1%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+ W GR+INA G+PIDG L +G++ + + PPA R RV + G+R +++ Sbjct: 114 VRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTAPPPAHARGRVGERLDLGVRSMNV 173 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 FT C GQR+G+FAGSG+GKS LLSM A+ D V++ L+GERGREVREF+E+ LG + Sbjct: 174 FTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGREVREFVEETLGEEG 233 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L+++VVVVATSDE + R+ A + I+EY + VL ++DS+TRFA + REI + Sbjct: 234 LRRAVVVVATSDEPALTRRQAAYMTLAISEYMRDQDQEVLCLMDSVTRFAMAQREIGLAA 293 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328 GE P +GY +VF+ELP+LLER GP ITA+ +VLVDGD+HN+PIAD+ Sbjct: 294 GEPPTTKGYTPTVFTELPKLLERAGPGPIRADGTTAAPITALFTVLVDGDDHNEPIADAT 353 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R ILDGHIV+ R++AE GR+P ++ L S+SR E+ +V ++ + + Sbjct: 354 RGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQLPHERDIVKGARQVMAAYSNMEE 413 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 + IG YR G D ++D+A+ P I FL Q + +S +D F + + LQ Sbjct: 414 LIRIGAYRAGADPVVDRAIRLNPAIEAFLSQDKEEATSLDDSFGLLGQILQ 464 >gi|254294575|ref|YP_003060598.1| flagellum-specific ATP synthase [Hirschia baltica ATCC 49814] gi|254043106|gb|ACT59901.1| ATPase, FliI/YscN family [Hirschia baltica ATCC 49814] Length = 495 Score = 307 bits (787), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 160/347 (46%), Positives = 224/347 (64%), Gaps = 7/347 (2%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S W GRV++A G P+DG L +G +S +I + P A +R RV + G+R +D F P Sbjct: 108 SNSWLGRVVDAFGAPVDGGLPLAQGSISRQIKAVPPAAHSRARVSEPMSLGVRALDGFAP 167 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216 GQR+G+FAGSG+GKSTL+SM AR+ D V+I L+GERGREVREF+ED LG + L + Sbjct: 168 CAVGQRMGLFAGSGVGKSTLMSMLARNAQADVVVIGLIGERGREVREFVEDTLGIEGLAR 227 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 SVVV ATSDE+ R+ A + +AE+F +G VL +LDS+TRFA + REI +GE Sbjct: 228 SVVVSATSDETAPRRRRAAWMTMAVAEHFRDQGYKVLCLLDSVTRFAMAQREIGLAAGEP 287 Query: 277 PVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSVRSI 331 P +GY SVFSELP+LLER GP + + +G IT + +VLVDGD+HN+P+AD+VR I Sbjct: 288 PTTKGYTPSVFSELPKLLERAGPGKIVPAGQPQGQITGLFTVLVDGDDHNEPVADAVRGI 347 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHIV++R +AE GRYP +D L S+SRLA ++ + ++ L+ + + ++ Sbjct: 348 LDGHIVMDRKIAERGRYPAIDVLKSLSRLASHLYTPETAEIARQARRLMSLYSDMEELVR 407 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS-SEDVFQEITKKL 437 IG Y G D +D+AV P I L Q ++ S E+ F + + L Sbjct: 408 IGAYARGADPEVDRAVQLSPDIEKILTQHVNENSPPEETFAMLAQVL 454 >gi|299134364|ref|ZP_07027557.1| ATPase, FliI/YscN family [Afipia sp. 1NLS2] gi|298591111|gb|EFI51313.1| ATPase, FliI/YscN family [Afipia sp. 1NLS2] Length = 441 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 153/333 (45%), Positives = 223/333 (66%), Gaps = 2/333 (0%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ PS W GRV+NA+G PIDG + +G M + PPA +R+RV + G+R ++ Sbjct: 90 QVRPSPAWLGRVVNAMGDPIDGKGPIEQGASPMPFRNLPPPAHSRKRVGQPLDLGVRALN 149 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 F C GQR+G+FAGSG+GKS LLSM AR+ D +I LVGERGREV+EF++D LG + Sbjct: 150 TFLTCCSGQRMGIFAGSGVGKSVLLSMLARNVDADISVIGLVGERGREVQEFLQDDLGEE 209 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSDE ++R+ A + I+EYF +G NVL ++DS+TRFA + REI + Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAISEYFRDEGQNVLCLMDSVTRFAMAQREIGLS 269 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A+GY +VF+ELP+LLER GP E G IT + +VLVDGD+HN+P+AD+VR IL Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIV+ RS+AE GRYP ++ L SVSR K+ + ++ ++ + + ++ + Sbjct: 329 DGHIVMERSIAERGRYPAINILKSVSRTMPKSADPEFLPVIMRGRQVMATYADMEELIRL 388 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 G YR G +D+A+ + +FL+Q+ ++ + Sbjct: 389 GAYRAGSSAEVDEAIRLHEPLENFLRQAKNEAT 421 >gi|1938379|gb|AAC45616.1| FliI [Caulobacter crescentus CB15] Length = 444 Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 152/351 (43%), Positives = 222/351 (63%), Gaps = 7/351 (1%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+ W GR+INA G+PIDG L +G++ + + PPA R RV + G+R +++ Sbjct: 91 VRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTAPPPAHARGRVGERLDLGVRSMNV 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 FT C GQR+G+FAGSG+GKS LLSM A+ D V++ L+GERGREVREF+E+ LG + Sbjct: 151 FTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGREVREFVEETLGEEG 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L+++VVVVATSDE + R+ A + I+E+ + VL ++DS+TRFA + REI + Sbjct: 211 LRRAVVVVATSDEPALTRRQAAYMTLAISEFMRDQDQEVLCLMDSVTRFAMAQREIGLAA 270 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328 GE P +GY +VF+ELP+LLER GP ITA+ +VLVDGD+HN+PIAD+ Sbjct: 271 GEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTTAAPITALFTVLVDGDDHNEPIADAT 330 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R ILDGHIV+ R++AE GR+P ++ L S+SR E+ +V ++ + + Sbjct: 331 RGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQHPHERDIVKGARQVMSAYSNMEE 390 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 + IG YR G D ++D+A+ P I FL Q + +S +D F + + LQ Sbjct: 391 LIRIGAYRAGADPVVDRAIRLNPAIEAFLSQDKEEATSLDDSFGMLGQILQ 441 >gi|162147452|ref|YP_001601913.1| flagellum-specific ATP synthase [Gluconacetobacter diazotrophicus PAl 5] gi|161786029|emb|CAP55611.1| Flagellum-specific ATP synthase [Gluconacetobacter diazotrophicus PAl 5] Length = 455 Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 174/414 (42%), Positives = 251/414 (60%), Gaps = 20/414 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVV---HQGKNSDNLGQVIRINLDIVYICPVGIGEE 80 G ++ ++ + +++ L + +GD V G+ +D ++ +++ I P G E Sbjct: 19 GRVTGLSGLTVSLSGLRDFTGVGDRVTIFGLDGRETD--ADILPFHINTAIIMPYGSLEG 76 Query: 81 ISLG-----DLVFHWGRFRISPSA-----CWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 I G L R R + W GRVI+ +G+PIDG L + ++ + Sbjct: 77 IGSGCRAMFQLFDPEQRRRRAGGTLVVNDAWQGRVIDPMGRPIDGKGPLPPDGVPQKLHA 136 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 P A R R+ G+RV+++F GQR+G+FAGSG+GKSTL+ M AR+ D Sbjct: 137 PPPEAALRARLGPRIDLGVRVLNLFATCREGQRLGLFAGSGVGKSTLMGMLARNTDCDVA 196 Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I+LVGERGREVREF+ED LG + L KSVVVVATSD SP++R+ A A AE+F +G Sbjct: 197 VIALVGERGREVREFVEDDLGPEGLAKSVVVVATSDTSPLMRREAAYAATAAAEHFRDQG 256 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS----EKEKG 305 +VLL++DS+TRF ++REI +SGE P RGYP SVF+ELPRLLER GP + + G Sbjct: 257 KSVLLLMDSVTRFCQALREIGLSSGEPPATRGYPPSVFAELPRLLERAGPGLPGPDGKAG 316 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 ITA+ SVLV+GD+HN+P+AD+VR ILDGH+V+ R +AE GRYP ++ L S+SR Sbjct: 317 QITAMFSVLVEGDDHNEPVADAVRGILDGHVVMERRIAESGRYPAINVLRSLSRTVPGCN 376 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 SA+E L + +EE +D+ +G YR G D +D+A+ P I + L+Q Sbjct: 377 SAEENALTRDARADLSTWEEMQDMVRLGAYRAGNDPKVDQAIRIAPAIEEILRQ 430 >gi|126738584|ref|ZP_01754289.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter sp. SK209-2-6] gi|126720383|gb|EBA17089.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter sp. SK209-2-6] Length = 442 Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 165/405 (40%), Positives = 252/405 (62%), Gaps = 3/405 (0%) Query: 17 KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPV 75 + LV Q G ++ IT ++ L ++ +GD +V Q D+L G+V++I++ + + P Sbjct: 15 RKLVTQMGRVTGITGGEIEISGLEKHARIGDRLVLQRGPKDHLHGEVLKIDVSKISMLPD 74 Query: 76 GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 + +++GD V +PS W GRVI+ G+P+DG L +G + ++M+ P A Sbjct: 75 RAPDRVAIGDRVLLHPAADFAPSDNWVGRVIDPFGEPLDGRPML-RGSEARDLMAPPPKA 133 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 R+++ TG+ V++ P+ GQR+G+FAGSG+GKSTLL+ A+S D V+++L+ Sbjct: 134 AGRRQMGARLATGLSVLNTILPVVQGQRVGLFAGSGVGKSTLLAKLAQSMEADVVVMALI 193 Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREV F+E+ LG + +K+++VV ATSD+S ++R+ +A+TIAE+F +G NVL Sbjct: 194 GERGREVNHFVEEVLGPEGMKRAIVVAATSDQSALVRRRCAWSAMTIAEHFRDQGKNVLF 253 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 + DS+TRFA + REIA SGE P RGYP SV + L ER GP + G+ITAV SVL Sbjct: 254 MADSVTRFAEAHREIAAASGEAPALRGYPPSVTPLITGLCERAGPGAEGHGDITAVFSVL 313 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V G + +PIAD +R +LDGHIVLNR +AE GR+P +D SVSR A + DE ++ Sbjct: 314 VAGSDMEEPIADILRGVLDGHIVLNREIAERGRFPAIDVSRSVSRSLPAAATDDENAMIL 373 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + + +E++ + G Y G DL+LD+AV P + F + Sbjct: 374 EVRKYLGSYEQSEVMIRAGLYSEGNDLVLDQAVKLWPELDSFFGK 418 >gi|209545561|ref|YP_002277790.1| flagellum-specific ATP synthase [Gluconacetobacter diazotrophicus PAl 5] gi|209533238|gb|ACI53175.1| ATPase, FliI/YscN family [Gluconacetobacter diazotrophicus PAl 5] Length = 455 Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 174/414 (42%), Positives = 249/414 (60%), Gaps = 20/414 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVV---HQGKNSDNLGQVIRINLDIVYICPVGIGEE 80 G ++ ++ + +++ L + +GD V G+ +D +++ D P G E Sbjct: 19 GRVTGLSGLTVSLSGLRDFTGVGDRVAIFGLDGRETD--AEIVAFRGDTAIAMPYGSLEG 76 Query: 81 ISLG-----DLVFHWGRFRISPSA-----CWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 I G L R R + W GRVI+ +G+PIDG L + ++ + Sbjct: 77 IGSGCRAMFQLFDPEQRRRRAGGTLVVNDAWQGRVIDPMGRPIDGKGPLPPDGVPQKLHA 136 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 P A R R+ G+RV+++F GQR+G+FAGSG+GKSTL+ M AR+ D Sbjct: 137 PPPEAALRARLGPRIDLGVRVLNLFATCREGQRLGLFAGSGVGKSTLMGMLARNTDCDVA 196 Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I+LVGERGREVREF+ED LG + L KSVVVVATSD SP++R+ A A AE+F +G Sbjct: 197 VIALVGERGREVREFVEDDLGPEGLAKSVVVVATSDTSPLMRREAAYAATAAAEHFRDQG 256 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS----EKEKG 305 +VLL++DS+TRF ++REI +SGE P RGYP SVF+ELPRLLER GP + + G Sbjct: 257 KSVLLLMDSVTRFCQALREIGLSSGEPPATRGYPPSVFAELPRLLERAGPGLPGPDGKAG 316 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 ITA+ SVLV+GD+HN+P+AD+VR ILDGH+V+ R +AE GRYP ++ L S+SR Sbjct: 317 QITAMFSVLVEGDDHNEPVADAVRGILDGHVVMERRIAESGRYPAINVLRSLSRTVPGCN 376 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 SA+E L + +EE +D+ +G YR G D +D+A+ P I + L+Q Sbjct: 377 SAEENALTRDARADLSTWEEMQDMVRLGAYRAGNDPKVDQAIRIAPAIEEILRQ 430 >gi|86751019|ref|YP_487515.1| flagellum-specific ATP synthase [Rhodopseudomonas palustris HaA2] gi|86574047|gb|ABD08604.1| ATPase FliI/YscN [Rhodopseudomonas palustris HaA2] Length = 441 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 152/334 (45%), Positives = 221/334 (66%), Gaps = 2/334 (0%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ PS W GRVINALG+PIDG L +G M + PPA +R+RV G+R ++ Sbjct: 90 QVRPSQAWLGRVINALGEPIDGKGPLPQGPSPMRFRNTPPPAHSRKRVGAPLDLGVRALN 149 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 F C GQR+G+FAGSG+GKS LLSM AR+ +I L+GERGREV+EF++D LG + Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 209 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 + +SVVVVATSDE ++R+ A ++IAEYF + +VL ++DS+TRFA + REI + Sbjct: 210 GMARSVVVVATSDEPALMRRQAAYLTLSIAEYFRDEDKDVLCLMDSVTRFAMAQREIGLS 269 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A+GY +VF+ELP+LLER GP E G I+ + +VLVDGD+HN+P+AD+VR IL Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLGE-GTISGIFTVLVDGDDHNEPVADAVRGIL 328 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIV+ RS+AE GR+P ++ L SVSR ++ ++ ++ + + ++ + Sbjct: 329 DGHIVMQRSIAERGRFPAINVLKSVSRTMPRSADPAYLPVIKRARQVMATYADMEELIRL 388 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 G YRPG +D+AV + +FL+Q + +S Sbjct: 389 GAYRPGSSAEVDEAVRLHEPLEEFLRQGKDEATS 422 >gi|163850256|ref|YP_001638299.1| flagellum-specific ATP synthase [Methylobacterium extorquens PA1] gi|254559506|ref|YP_003066601.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4] gi|163661861|gb|ABY29228.1| flagellar protein export ATPase FliI [Methylobacterium extorquens PA1] gi|254266784|emb|CAX22583.1| flagellum-specific ATP synthase [Methylobacterium extorquens DM4] Length = 451 Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/333 (47%), Positives = 214/333 (64%), Gaps = 2/333 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 I PSA W GR ++ALG+PIDG L +G + + PPA R+RV G+R I+ Sbjct: 105 IRPSAAWLGRTVDALGRPIDGLGPLAQGPAIYPLRADPPPAHGRRRVGPPLDLGVRCINT 164 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 F +C GQR+G+FAGSG+GKS LLSM AR D +I LVGERGREV+EF++D LG Sbjct: 165 FLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLVGERGREVQEFLQDDLGAAG 224 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L +SVVVVATSDE ++R+ A + +AEYF +G VL ++DSITRFA + R+I Sbjct: 225 LARSVVVVATSDEPVLMRRNAAYVTLAVAEYFRDQGAQVLCMIDSITRFAMAQRDIGLAG 284 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P A+GY +VFSELPRLLER GP E G I+ + +VLV+GD+HN+P+AD+VR ILD Sbjct: 285 GEPPTAKGYTPTVFSELPRLLERAGPGVGE-GAISGLFTVLVEGDDHNEPVADAVRGILD 343 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIV+ R +AE+GRYP ++ L SVSR +A V ++ + + ++ +G Sbjct: 344 GHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPARLPTVRRARKVLATYADMEELIRLG 403 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 YR G +D+AV +P + FL Q + +S Sbjct: 404 AYRAGSSPEVDEAVALMPDLTAFLGQGKEEATS 436 >gi|167644988|ref|YP_001682651.1| flagellum-specific ATP synthase [Caulobacter sp. K31] gi|167347418|gb|ABZ70153.1| ATPase, FliI/YscN family [Caulobacter sp. K31] Length = 445 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 219/340 (64%), Gaps = 6/340 (1%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+ W GR+INA G+PIDG L +G++ + + PPA R RV + G+R +++ Sbjct: 91 VRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTPPPPAHARGRVGERLDLGVRSMNV 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 FT C GQR+G+FAGSG+GKS LLSM A+ D V++ L+GERGREVREFIE+ LG + Sbjct: 151 FTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGREVREFIEETLGEEG 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 LK+++VVVATSDE + R+ A + I EY + VL ++DS+TRFA + REI + Sbjct: 211 LKRAIVVVATSDEPALTRRQAAYMTLAICEYLRDQDQEVLCLMDSVTRFAMAQREIGLAA 270 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328 GE P +GY +VF+ELP+LLER GP G ITA+ +VLVDGD+HN+PIAD+ Sbjct: 271 GEPPTTKGYTPTVFTELPKLLERAGPGPIRADGTTAGPITALFTVLVDGDDHNEPIADAT 330 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R ILDGHIV+ R++AE GR+P ++ L S+SR + +E+++V + + + + Sbjct: 331 RGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQTPEEREVVKAARQTMAAYSNMEE 390 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + IG YR G D I+D+A+ P I FL Q + +S D Sbjct: 391 LIRIGAYRAGADPIIDRAIRLNPAIEAFLGQDKDEATSLD 430 >gi|209886224|ref|YP_002290081.1| flagellar protein export ATPase FliI [Oligotropha carboxidovorans OM5] gi|209874420|gb|ACI94216.1| flagellar protein export ATPase FliI [Oligotropha carboxidovorans OM5] Length = 441 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 152/328 (46%), Positives = 220/328 (67%), Gaps = 2/328 (0%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ P A W GRV+NA+G+PIDG L +G + + + PPA R+RV + G+R ++ Sbjct: 90 QVRPCAAWLGRVVNAMGEPIDGKGPLPQGSVPVSFRNLPPPAHARKRVGEPLDLGVRALN 149 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 F C GQR+G+FAGSG+GKS LLSM AR+ D +I LVGERGREV+EF++D LG + Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDADISVIGLVGERGREVQEFLQDDLGEE 209 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSDE ++R+ A + IAEYF + +VL ++DS+TRFA + REI + Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAIAEYFRDQDQSVLCLMDSVTRFAMAQREIGLS 269 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A+GY +VF+ELP+LLER GP E G IT + +VLVDGD+HN+P+AD+VR IL Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIV+ R++AE GRYP ++ L SVSR K+ + ++ ++ + + ++ + Sbjct: 329 DGHIVMERAIAERGRYPAINILKSVSRTMPKSADPEFLPVIMRGRQVMATYADMEELIRL 388 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQS 420 G YR G +D+A+ + DFL+Q+ Sbjct: 389 GAYRAGSSPEVDEAIRLHEPLEDFLRQA 416 >gi|188580014|ref|YP_001923459.1| flagellum-specific ATP synthase [Methylobacterium populi BJ001] gi|179343512|gb|ACB78924.1| flagellar protein export ATPase FliI [Methylobacterium populi BJ001] Length = 452 Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 176/412 (42%), Positives = 240/412 (58%), Gaps = 10/412 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLG---DFVVHQGKNSDNLG---QVIRINLDIVYICPVGI 77 G +++I + V + LG D VV G + +VI D P G Sbjct: 27 GRVTAIRGLLVEVAGPVSAMRLGGRIDVVVEGGHGAATATVPCEVIGFAGDRALAMPFGS 86 Query: 78 GEEISLG--DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 E + G LV I PSA W GR ++ALG+PIDG L +G + + PPA Sbjct: 87 LEGVRRGCPALVRDEAAGAIRPSAAWLGRTVDALGRPIDGLGPLPQGPAIYPLRADPPPA 146 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 R+RV G+R I+ F +C GQR+G+FAGSG+GKS LLSM AR D +I LV Sbjct: 147 HGRRRVGPPLDLGVRCINTFLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLV 206 Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREV+EF++D LG L +SVVVVATSDE ++R+ A + IAEYF +G VL Sbjct: 207 GERGREVQEFLQDDLGAAGLARSVVVVATSDEPVLMRRNAAYVTLAIAEYFRDQGAQVLC 266 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DSITRFA + R+I GE P A+GY +VFSELPRLLER GP E G I+ + +VL Sbjct: 267 MIDSITRFAMAQRDIGLAGGEPPTAKGYTPTVFSELPRLLERAGPGVGE-GAISGLFTVL 325 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V+GD+HN+P+AD+VR ILDGHIV+ R +AE+GRYP ++ L SVSR +A V Sbjct: 326 VEGDDHNEPVADAVRGILDGHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPAHLPTVR 385 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 ++ + + ++ +G YR G +D+AV +P + FL Q + +S Sbjct: 386 RARKVLATYADMEELIRLGAYRAGSSPEVDEAVALMPDLTAFLGQGKEEATS 437 >gi|218528814|ref|YP_002419630.1| flagellum-specific ATP synthase [Methylobacterium chloromethanicum CM4] gi|218521117|gb|ACK81702.1| ATPase FliI/YscN [Methylobacterium chloromethanicum CM4] Length = 451 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 157/333 (47%), Positives = 214/333 (64%), Gaps = 2/333 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 I PSA W GR ++ALG+PIDG L +G + + PPA R+RV G+R I+ Sbjct: 105 IRPSAAWLGRTVDALGRPIDGLGPLAQGPAIYPLRADPPPAHGRRRVGPPLDLGVRCINT 164 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 F +C GQR+G+FAGSG+GKS LLSM AR D +I LVGERGREV+EF++D LG Sbjct: 165 FLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLVGERGREVQEFLQDDLGAAG 224 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L +SVVVVATSDE ++R+ A + +AEYF +G VL ++DSITRFA + R+I Sbjct: 225 LARSVVVVATSDEPVLMRRNAAYVTLAVAEYFRDQGAQVLCMIDSITRFAMAQRDIGLAG 284 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P A+GY +VFSELPRLLER GP E G I+ + +VLV+GD+HN+P+AD+VR ILD Sbjct: 285 GEPPTAKGYTPTVFSELPRLLERAGPGVGE-GAISGLFTVLVEGDDHNEPVADAVRGILD 343 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIV+ R +AE+GRYP ++ L SVSR +A V ++ + + ++ +G Sbjct: 344 GHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPAHLPTVRRARKVLATYADMEELIRLG 403 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 YR G +D+AV +P + FL Q + +S Sbjct: 404 AYRAGSAPEVDEAVALMPDLTAFLGQGKEEATS 436 >gi|329849943|ref|ZP_08264789.1| flagellar protein export ATPase FliI [Asticcacaulis biprosthecum C19] gi|328841854|gb|EGF91424.1| flagellar protein export ATPase FliI [Asticcacaulis biprosthecum C19] Length = 443 Score = 303 bits (777), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 154/375 (41%), Positives = 231/375 (61%), Gaps = 7/375 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ D + P G E ++ G ++ ++ P+ W GR++++ G ID L Sbjct: 56 EVVGFREDRALMMPFGPVEGVTPGAEIRISAEGSKVFPTTAWLGRIVDSFGNAIDSHGPL 115 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 +G + + P A R RV + G+R +D+FT C GQR+GVFAGSG+GKS LLS Sbjct: 116 PQGPEGYLLKAAPPAAHTRARVGERLNLGVRAMDVFTTCCRGQRLGVFAGSGVGKSVLLS 175 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M AR D V++ L+GERGREVREFIE+ LG + LK+++VVVATSDE + R+ A Sbjct: 176 MLAREATCDAVVVGLIGERGREVREFIEETLGPEGLKRAIVVVATSDEPALKRRQAAYMT 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 + +AE+ +G VL ++DS+TRFA + REI +GE P +GY + F+ELP+LLER G Sbjct: 236 LALAEFLRDQGLEVLCLMDSVTRFAMAQREIGLATGEPPTTKGYTPTCFAELPKLLERAG 295 Query: 299 PSE-----KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 P + G ITA+ +VLVDGD+HN+PIAD+VR ILDGHIV++R++AE GR+P +D Sbjct: 296 PGPVLADGTQAGPITALFTVLVDGDDHNEPIADAVRGILDGHIVMSRNIAERGRFPAIDV 355 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 L S+SR + + E+++V ++ + ++ IG YR G D +D+A+ P + Sbjct: 356 LKSISRTMPECQTIPEREVVRQARKVLSAYSNMEELIRIGAYRTGADPDVDRAIQLNPAV 415 Query: 414 YDFLKQSPSDLSSED 428 +FL+Q + + D Sbjct: 416 EEFLRQGKDEYTPLD 430 >gi|27377312|ref|NP_768841.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110] gi|27350455|dbj|BAC47466.1| flagellum-specific ATP synthase [Bradyrhizobium japonicum USDA 110] Length = 441 Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 156/346 (45%), Positives = 226/346 (65%), Gaps = 3/346 (0%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ PS W GRV+NALG+PIDG L +G M + PPA +R+RV G+R ++ Sbjct: 90 QVRPSTAWLGRVVNALGEPIDGKGPLPQGSSPMPFRNTPPPAHSRKRVGSPLDLGVRAMN 149 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 F C GQR+G+FAGSG+GKS LLSM AR+ +I L+GERGREV+EF++D LG + Sbjct: 150 TFLTCCRGQRMGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 209 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSDE ++R+ A + +AEYF + +VL ++DS+TRFA + REI + Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAVAEYFRDEDKDVLCLMDSVTRFAMAQREIGLS 269 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A+GY +VF+ELP+LLER GP E G ITA+ +VLVDGD+HN+PIAD+VR IL Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGLGE-GAITAIFTVLVDGDDHNEPIADAVRGIL 328 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIV+ RS+AE GRYP ++ L SVSR K+ + + ++ + + ++ + Sbjct: 329 DGHIVMQRSIAERGRYPAINILKSVSRTMPKSADPEFWPTIQKARQVMATYADMEELIRL 388 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437 G YR G +D+A+ + FL+Q + +S D ++++ + L Sbjct: 389 GAYRAGSSPEVDEAIRLHEPLEGFLRQRKDENASLADGYRQLAQIL 434 >gi|240137327|ref|YP_002961796.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1] gi|240007293|gb|ACS38519.1| flagellum-specific ATP synthase [Methylobacterium extorquens AM1] Length = 451 Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 157/333 (47%), Positives = 213/333 (63%), Gaps = 2/333 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 I PSA W GR ++ALG+PIDG L +G + + PPA R+RV G+R I+ Sbjct: 105 IRPSAAWLGRTVDALGRPIDGLGPLAQGPAIYPLRADPPPAHGRRRVGPPLDLGVRCINT 164 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 F +C GQR+G+FAGSG+GKS LLSM AR D +I LVGERGREV+EF++D LG Sbjct: 165 FLTMCRGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLVGERGREVQEFLQDDLGAAG 224 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L SVVVVATSDE ++R+ A + +AEYF +G VL ++DSITRFA + R+I Sbjct: 225 LAHSVVVVATSDEPVLMRRNAAYVTLAVAEYFRDQGAQVLCMIDSITRFAMAQRDIGLAG 284 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P A+GY +VFSELPRLLER GP E G I+ + +VLV+GD+HN+P+AD+VR ILD Sbjct: 285 GEPPTAKGYTPTVFSELPRLLERAGPGVGE-GAISGLFTVLVEGDDHNEPVADAVRGILD 343 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIV+ R +AE+GRYP ++ L SVSR +A V ++ + + ++ +G Sbjct: 344 GHIVMERRIAEQGRYPAINVLRSVSRTMPRACDPAHLPTVRRARKVLATYADMEELIRLG 403 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 YR G +D+AV +P + FL Q + +S Sbjct: 404 AYRAGSSPEVDEAVALMPDLTAFLGQGKEEATS 436 >gi|170751942|ref|YP_001758202.1| flagellum-specific ATP synthase [Methylobacterium radiotolerans JCM 2831] gi|170658464|gb|ACB27519.1| flagellar protein export ATPase FliI [Methylobacterium radiotolerans JCM 2831] Length = 450 Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 173/408 (42%), Positives = 241/408 (59%), Gaps = 6/408 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIGEEI 81 G + +I + V + LG V +G N L +VI D P G E + Sbjct: 29 GRVVAIRGLLVEVAGPVAAMRLGGRVDVEGANGHGLVPCEVIGFQGDRALAMPFGSLEGV 88 Query: 82 SLG--DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 G V I PS W GRVI+ALG+P+DG L +G + + PPA R Sbjct: 89 RRGCPAYVRDESAGAIRPSGAWLGRVIDALGRPVDGLGPLAQGPDVYPLRADPPPAHART 148 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 RV G+R I+ F +C GQR+G+FAGSG+GKS LLSM AR D +I LVGERG Sbjct: 149 RVGGPLDLGVRCINTFLTMCAGQRMGIFAGSGVGKSVLLSMLARYTAADVAVIGLVGERG 208 Query: 200 REVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REV+EF++D LG L +SVVVVATSDE ++R+ A +++AE+F +G VL ++DS Sbjct: 209 REVQEFLQDDLGAAGLARSVVVVATSDEPALMRRNAAYVTLSVAEHFRDQGAKVLCMIDS 268 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 ITRFA + R+I +GE P A+GY +VFSELPRLLER GP + G I+A+ +VLV+GD Sbjct: 269 ITRFAMAQRDIGLAAGEPPTAKGYTPTVFSELPRLLERAGPGVGQ-GTISALFTVLVEGD 327 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 +HN+P+AD+VR ILDGHIV+ R++AE GRYP ++ L SVSR ++ +V Sbjct: 328 DHNEPVADAVRGILDGHIVMERAIAERGRYPAINVLRSVSRTMPRSCDPAYLPVVRRARR 387 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L+ + + ++ +G YR G +D+AV +P + FL Q + +S Sbjct: 388 LLSTYADMEELIRLGAYRAGSSQEVDEAVALMPHLEAFLGQGKEEATS 435 >gi|332295033|ref|YP_004436956.1| ATPase, FliI/YscN family [Thermodesulfobium narugense DSM 14796] gi|332178136|gb|AEE13825.1| ATPase, FliI/YscN family [Thermodesulfobium narugense DSM 14796] Length = 435 Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 186/435 (42%), Positives = 258/435 (59%), Gaps = 21/435 (4%) Query: 3 KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62 KNL+ L EDY N + G I I+ Y + + V +G+ V S V Sbjct: 2 KNLKVLKDFIEDY--NYLPWNGTIDKISG--YVIESIGPKVSIGEIVYIDSGKSQIPCLV 57 Query: 63 IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGR-----VINALGKPIDGDD 117 I + + VY+ P E I G +V G+ W G+ V++ LG+P+ D+ Sbjct: 58 IGFSSNKVYLTPFDAIEGIEPGSIVKKTGK----QLGLWVGKHLLGQVLDGLGRPLS-DE 112 Query: 118 SLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + + D+S I +K P + R R+ + TGIR ID L GQR+G+FAGSGIGK+ Sbjct: 113 YIQRDDMSQYRSIENKSPHPLKRGRIREPISTGIRAIDGLLTLGKGQRVGIFAGSGIGKT 172 Query: 176 TLLSMFARSDCFDKV-IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233 TLL M +R C +V II+LVGERGREVREF+E+ LG D L KSVV+V+TSD P R + Sbjct: 173 TLLGMISRF-CNAQVNIIALVGERGREVREFLEESLGEDGLAKSVVIVSTSDNPPSQRVL 231 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 + TA IAEYF G +VL+++DS+TR + RE+ + GE P RGYP SVF+ + RL Sbjct: 232 SAFTATVIAEYFRDLGMDVLMVMDSLTRVCMAQRELGLSIGEPPTTRGYPPSVFTMMARL 291 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER G S+K G+IT + +VLV+GD+ +PIAD RSILDGHIVL+R LAE G YPP+D Sbjct: 292 LERAGTSDK--GSITGIYTVLVEGDDLAEPIADHARSILDGHIVLSRDLAERGYYPPIDI 349 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 SVSRL + D L + LI ++E D+ IG Y+ G + +D+++ ++ I Sbjct: 350 SQSVSRLMNSITDKDHLNLSYRIKELIASYKEAYDLINIGAYQKGSNSKIDESIEKISKI 409 Query: 414 YDFLKQSPSDLSSED 428 +FLKQ+P D+SS D Sbjct: 410 EEFLKQTPEDISSFD 424 >gi|78043388|ref|YP_359843.1| flagellum-specific ATP synthase [Carboxydothermus hydrogenoformans Z-2901] gi|77995503|gb|ABB14402.1| flagellum-specific ATP synthase [Carboxydothermus hydrogenoformans Z-2901] Length = 434 Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 170/404 (42%), Positives = 246/404 (60%), Gaps = 6/404 (1%) Query: 35 TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93 TV V +G+ V N+ L +V+ + + P+G ISLG LV R Sbjct: 32 TVEAHGLKVSVGETVEILAGNARVLAEVVGFKEENAILMPLGEINGISLGSLVRPLRRQL 91 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 +I+ G+V++ LG+P++ D G+ + K P ++R+R++K F TGI+ ID Sbjct: 92 QITVGKSLLGKVLDGLGRPLNADKIYGR---HFSLDRKPPKPLHRRRIKKPFATGIKAID 148 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 GQR+G+FAGSG+GKSTLL M AR D +I+L+GERGREV +FIE+ LG+ Sbjct: 149 GPLTCGEGQRLGIFAGSGVGKSTLLGMIARYAEADVNVIALIGERGREVLDFIENDLGEG 208 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +KKSV+VVATS++ + R A IAEYF +G VLL++DS+TRFA + REI + Sbjct: 209 IKKSVLVVATSEQPALFRVKGAFVATAIAEYFREQGKKVLLMMDSLTRFAMAQREIGLAA 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +RGY SVF+ LP+L+ER G +KG+ITA +VLV+GD+ N+PIAD+VR +LD Sbjct: 269 GEPPSSRGYTPSVFALLPKLVERAG--NDDKGSITAFYTVLVEGDDFNEPIADAVRGLLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LA +G YP +D LAS SRL + L + ++ + + D+ LIG Sbjct: 327 GHIVLSRQLAGKGHYPAIDLLASNSRLMPELVDEQHLALTLKMREILDIYRQNEDLILIG 386 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 Y+PG + +LD+A+ VP I FL+Q ++ +E+ K L Sbjct: 387 AYKPGTNPLLDRAIQLVPKINQFLQQKQNEKVDFTTTKEMLKTL 430 >gi|163738066|ref|ZP_02145482.1| ATP synthase FliI/YscN [Phaeobacter gallaeciensis BS107] gi|163742538|ref|ZP_02149924.1| H+-transporting two-sector ATPase, flagellum-specific [Phaeobacter gallaeciensis 2.10] gi|161384123|gb|EDQ08506.1| H+-transporting two-sector ATPase, flagellum-specific [Phaeobacter gallaeciensis 2.10] gi|161388682|gb|EDQ13035.1| ATP synthase FliI/YscN [Phaeobacter gallaeciensis BS107] Length = 442 Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 167/419 (39%), Positives = 257/419 (61%), Gaps = 4/419 (0%) Query: 5 LETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQV 62 + + L +D + K L G +S I+ TV+ L+ +GD ++ + SD L G+V Sbjct: 2 ISAINALTQDLANKKLSSAVGRVSEISGGAITVSGLNGQARIGDRLILRRAGSDPLEGEV 61 Query: 63 IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122 +RI+ V + P + +++GD V +P+ W GRVI+ G P+DG + +G Sbjct: 62 MRISGSEVSMLPDTAPDRVAVGDAVLLHPTPDFAPADSWIGRVIDPFGAPLDGRPMM-RG 120 Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 + + ++M+ P A +R+ + + TG+ V + P+ GQR+G+FAGSG+GKSTLL+ A Sbjct: 121 EATRDLMAAPPKAASRRPMGERLATGLAVFNTILPIVKGQRVGLFAGSGVGKSTLLATLA 180 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTI 241 ++ D V+I+L+GERGREV F++D LGD ++++VVV ATSD+S ++R+ +A+ + Sbjct: 181 QNMEADVVVIALIGERGREVNHFVKDVLGDEGMQRAVVVAATSDQSALVRRRCAWSAMAV 240 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AE+F +G NVL + DS+TRFA + REIA +SGE P RGYP SV + L ER GP Sbjct: 241 AEHFRDQGKNVLFLADSVTRFAEAHREIAVSSGEAPALRGYPPSVTPLITGLCERAGPGS 300 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 ++G+ITA+ SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P VD SVSR Sbjct: 301 GDQGDITAIFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVSRSL 360 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 A +ADE + + + +E++ + G Y G D+ LD+AV P + F +S Sbjct: 361 PAAATADENSAILDVRKYLGAYEQSEVMIRAGLYSEGNDVTLDQAVKLWPELDSFFGRS 419 >gi|259417146|ref|ZP_05741065.1| flagellum-specific ATP synthase [Silicibacter sp. TrichCH4B] gi|259346052|gb|EEW57866.1| flagellum-specific ATP synthase [Silicibacter sp. TrichCH4B] Length = 447 Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 167/425 (39%), Positives = 259/425 (60%), Gaps = 5/425 (1%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59 M K+++ L+Q E + L G ++ I+ V+ L +GD V+ +GK D Sbjct: 6 MMKSIQALSQ--ELANTRLAAPMGRVTGISGGEIEVSGLETQARIGDRLVLRRGKKDDLH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 G+V+ I + + + P E S+GD V + +P W GRVI+ G+P+DG L Sbjct: 64 GEVLAIGANHIRMLPDTAPERASIGDAVLLFETPEFAPDNSWIGRVIDPFGEPLDGKPML 123 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 +G S ++M P A R+ + K TG+ +++ P+ GQRIG+FAGSG+GKSTL++ Sbjct: 124 -RGVESRDLMESPPKAAARRGLGKRLSTGLAILNTVLPIVTGQRIGLFAGSGVGKSTLMA 182 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 A++ D V+++L+GERGREV F+++ LG + +K++VVV ATSD+S ++R+ +A Sbjct: 183 QLAQNMEADVVVMALIGERGREVNHFVKEVLGPEGMKRAVVVAATSDQSALVRRRCAWSA 242 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AE+F +G NVL + DSITRFA + REIA SGE P RG+P SV + L ER G Sbjct: 243 MSVAEHFRDQGLNVLFMADSITRFAEAHREIAVASGEAPALRGFPPSVTPLITGLCERAG 302 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + +G+ITAV SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P +D SVS Sbjct: 303 PGLEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAIDVSRSVS 362 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R A + +E +++ ++ + +E++ + G Y G DL+LD+AV P + F Sbjct: 363 RSLPAAATKEENEMILAVRKFLGAYEQSEVMIRAGLYSEGNDLVLDQAVKIWPELDSFFG 422 Query: 419 QSPSD 423 + +D Sbjct: 423 RDETD 427 >gi|20807886|ref|NP_623057.1| flagellar biosynthesis/type III secretory pathway ATPase [Thermoanaerobacter tengcongensis MB4] gi|254478883|ref|ZP_05092247.1| flagellar protein export ATPase FliI [Carboxydibrachium pacificum DSM 12653] gi|20516451|gb|AAM24661.1| Flagellar biosynthesis/type III secretory pathway ATPase [Thermoanaerobacter tengcongensis MB4] gi|214035196|gb|EEB75906.1| flagellar protein export ATPase FliI [Carboxydibrachium pacificum DSM 12653] Length = 437 Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 169/363 (46%), Positives = 235/363 (64%), Gaps = 5/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +V+ + VY+ P+G E I G V G+ +++ GRV++ LG PIDG Sbjct: 57 LAEVVGFKEEKVYLMPLGNMEGIGPGSKVIATGQTLKVNVGKSLLGRVLDGLGNPIDGKG 116 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L K + S+ + + P + R+R+ + GI+ ID GQRIG+FAGSG+GKSTL Sbjct: 117 PL-KYEKSIPVNNTPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTL 175 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M AR+ D +I+L+GERGREV EFIE LG+ LK+SVVVVATSD ++R + Sbjct: 176 LGMMARNAKADLNVIALIGERGREVNEFIEKDLGEEGLKRSVVVVATSDTPALVRVKGAM 235 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA IAEYF +G +VLL++DSITRFA + REI + GE PV+RGY SVFS LP+LLER Sbjct: 236 TATAIAEYFRDQGLDVLLMMDSITRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLER 295 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S+K G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA + YP +D LAS Sbjct: 296 SGSSQK--GSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLAS 353 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + + + K+LV+ +++ + E D+ IG Y G + +D+A+ + F Sbjct: 354 VSRVINDIITDEHKELVAKFKNILATYAEAEDLINIGAYNFGTNPKIDEAIELNEKMNSF 413 Query: 417 LKQ 419 L+Q Sbjct: 414 LRQ 416 >gi|302382319|ref|YP_003818142.1| ATPase, FliI/YscN family [Brevundimonas subvibrioides ATCC 15264] gi|302192947|gb|ADL00519.1| ATPase, FliI/YscN family [Brevundimonas subvibrioides ATCC 15264] Length = 446 Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 151/337 (44%), Positives = 212/337 (62%), Gaps = 6/337 (1%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+ W GR+I+A G+PIDG L +G + + P A +R RV + G+R +D+ Sbjct: 91 VYPTTAWLGRIIDAFGQPIDGKGPLPQGPAPYPLRAAPPAAHSRGRVGERLDLGVRSMDV 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 FT C GQR+G+FAGSG+GKS LLSM AR D V++ L+GERGREVREFIE+ LG + Sbjct: 151 FTTTCRGQRLGIFAGSGVGKSVLLSMLARQATCDAVVVGLIGERGREVREFIEETLGEEG 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L++++VVVATSDE + R+ A + I+EY + VL ++DS+TRFA + REI + Sbjct: 211 LRRAIVVVATSDEPALKRRQAAYMTMAISEYLRDQDLEVLCLMDSVTRFAMAQREIGLAA 270 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328 GE P +GY +VFSELP+LLER GP ITA+ +VLVDG +H++PIAD+V Sbjct: 271 GEPPTTKGYTPTVFSELPKLLERAGPGPIRPDGTTAAPITAMFTVLVDGGDHDEPIADAV 330 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R ILDGHIV++R +AE GR+P +D L SVSR + E++L + + + Sbjct: 331 RGILDGHIVMDRKIAERGRFPAIDVLKSVSRTLPGCQTPPERELNRRARQCLSAYSSMEE 390 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + IG YR G D I D+A+ P + FL Q D++ Sbjct: 391 LIKIGAYRAGADPITDRAIALNPALEAFLGQDKDDVT 427 >gi|99082806|ref|YP_614960.1| ATP synthase FliI/YscN [Ruegeria sp. TM1040] gi|99039086|gb|ABF65698.1| flagellum-specific ATP synthase [Ruegeria sp. TM1040] Length = 442 Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 167/425 (39%), Positives = 257/425 (60%), Gaps = 5/425 (1%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59 M K+++ L+Q E + L G ++ I+ V+ L +GD + +GK D Sbjct: 1 MMKSIQALSQ--ELANTRLAAPMGRVTGISGGEIEVSGLESQARIGDRLTLRRGKKDDLH 58 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 G+V+ I D + + P E S+GD V + +P W GRVI+ G+P+DG L Sbjct: 59 GEVLAIGSDHIRMLPDTAPERASIGDAVLLFQTPEFAPDDSWVGRVIDPFGEPLDGKPML 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 +G S ++M P A R+ + K TG+ +++ P+ GQRIG+FAGSG+GKSTL++ Sbjct: 119 -RGVESRDLMESPPKAAARRGLGKRLSTGLAILNTVLPIVTGQRIGLFAGSGVGKSTLMA 177 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 A++ D V+++L+GERGREV F+++ LG + +K++VVV ATSD+S ++R+ A Sbjct: 178 QLAQNMEADVVVMALIGERGREVNHFVKEVLGPEGMKRAVVVAATSDQSALVRRRCAWAA 237 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AE+F +G NVL + DSITRFA + REIA SGE P RG+P SV + L ER G Sbjct: 238 MSVAEHFRDQGLNVLFMADSITRFAEAHREIAVASGEAPALRGFPPSVTPLITGLCERAG 297 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + +G+ITAV SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P +D SVS Sbjct: 298 PGLEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAIDVSRSVS 357 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R A + +E +++ ++ + +E++ + G Y G DL+LD+AV P + F Sbjct: 358 RSLPAAATKEENEMILAVRKFLGAYEQSEVMIRAGLYSEGNDLVLDQAVKIWPELDSFFG 417 Query: 419 QSPSD 423 ++ D Sbjct: 418 RNELD 422 >gi|148257762|ref|YP_001242347.1| flagellum-specific ATP synthase [Bradyrhizobium sp. BTAi1] gi|146409935|gb|ABQ38441.1| flagellum-specific ATP synthase [Bradyrhizobium sp. BTAi1] Length = 440 Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 150/327 (45%), Positives = 215/327 (65%), Gaps = 2/327 (0%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ PS W GRVINA+G+PIDG L +G + + PPA +R+RV G+R ++ Sbjct: 89 QVRPSPAWLGRVINAMGEPIDGKGPLPQGAAPVPYRNNPPPAHSRKRVGSPLDLGVRALN 148 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 F C GQR+G+FAGSG+GKS LLSM AR+ +I L+GERGREV+EF++D LG + Sbjct: 149 TFLTCCRGQRLGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 208 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSDE ++R+ A + I+EYF +G +VL ++DS+TRFA + REI + Sbjct: 209 GLARSVVVVATSDEPALMRRQAAYLTLAISEYFRDEGKDVLCLMDSVTRFAMAQREIGLS 268 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A+GY +VF+ELP+LLER GP E G IT + +VLVDGD+HN+P+AD+VR IL Sbjct: 269 AGEPPTAKGYTPTVFTELPKLLERAGPGSGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 327 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGH+V+ RS+AE GRYP ++ L SVSR K+ + ++ + + ++ + Sbjct: 328 DGHVVMQRSIAERGRYPAINILKSVSRTMPKSADPVFLPTIMRARQVMATYADMEELIRL 387 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419 G YR G +D+A+ + FL+Q Sbjct: 388 GAYRAGSSPEVDEAIRLHEPLEAFLRQ 414 >gi|16127270|ref|NP_421834.1| flagellum-specific ATP synthase [Caulobacter crescentus CB15] gi|221236071|ref|YP_002518508.1| flagellum-specific ATP synthase [Caulobacter crescentus NA1000] gi|239977229|sp|B8H363|FLII_CAUCN RecName: Full=Flagellum-specific ATP synthase gi|239977230|sp|P0CAT8|FLII_CAUCR RecName: Full=Flagellum-specific ATP synthase gi|13424682|gb|AAK25002.1| flagellum-specific ATP synthase FliI [Caulobacter crescentus CB15] gi|220965244|gb|ACL96600.1| flagellum-specific ATP synthase fliL [Caulobacter crescentus NA1000] Length = 444 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 152/351 (43%), Positives = 222/351 (63%), Gaps = 7/351 (1%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+ W GR+INA G+PIDG L +G++ + + PPA R RV + G+R +++ Sbjct: 91 VRPTKAWLGRIINAFGEPIDGLGPLPQGEVPYPLKTPPPPAHARGRVGERLDLGVRSMNV 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 FT C GQR+G+FAGSG+GKS LLSM A+ D V++ L+GERGREVREF+E+ LG + Sbjct: 151 FTTTCRGQRLGIFAGSGVGKSVLLSMLAKEATCDAVVVGLIGERGREVREFVEETLGEEG 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L+++VVVVATSDE + R+ A + I+E+ + VL ++DS+TRFA + REI + Sbjct: 211 LRRAVVVVATSDEPALTRRQAAYMTLAISEFMRDQDQEVLCLMDSVTRFAMAQREIGLAA 270 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328 GE P +GY +VF+ELP+LLER GP ITA+ +VLVDGD+HN+PIAD+ Sbjct: 271 GEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTTAAPITALFTVLVDGDDHNEPIADAT 330 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R ILDGHIV+ R++AE GR+P ++ L S+SR E+ +V ++ + + Sbjct: 331 RGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQHPHERDIVKGARQVMSAYSNMEE 390 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 + IG YR G D ++D+A+ P I FL Q + +S +D F + + LQ Sbjct: 391 LIRIGAYRAGADPVVDRAIRLNPAIEAFLSQDKEEATSLDDSFGMLGQILQ 441 >gi|157738148|ref|YP_001490832.1| flagellum-specific ATP synthase [Arcobacter butzleri RM4018] gi|315636291|ref|ZP_07891541.1| flagellum-specific ATP synthase FliI [Arcobacter butzleri JV22] gi|157700002|gb|ABV68162.1| flagellum-specific ATP synthase FliI [Arcobacter butzleri RM4018] gi|315479380|gb|EFU70063.1| flagellum-specific ATP synthase FliI [Arcobacter butzleri JV22] Length = 435 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 176/428 (41%), Positives = 255/428 (59%), Gaps = 10/428 (2%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYIC 73 S +L + G I++I+++ T+T + V +GD V + + LG V IN I Sbjct: 13 SASLPIAFGRITNISAI--TLTAIGLEVAVGDIVRIESEQRLYSVLGMVTTINDSSFIIV 70 Query: 74 PVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132 P E + D VF + GRV+NALG+PID + D + I Sbjct: 71 PFSFIEGFKINDKVFLQRDGLTVKCGNGLLGRVVNALGEPIDNKGKIRDLDENSAINKIS 130 Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-I 191 + R +++ F TG++ ID GQ++G+FAGSG+GKSTL+ M + C +V + Sbjct: 131 MSPLERGIIDQKFSTGVKAIDSMLTCGKGQKVGIFAGSGVGKSTLMGMIVKG-CEAQVKV 189 Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 ++LVGERGRE+ EFI L D+L+ +V+V ATSDES ++RK TA++IAEYF KG + Sbjct: 190 VALVGERGREIPEFIHYNLNDDLENTVIVAATSDESALMRKYGAFTAMSIAEYFRDKGLD 249 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 VLL++DS+TRFA + REI ++GE PV+RGYP SVF+ LP+L+ER G +KG+ITA Sbjct: 250 VLLMMDSVTRFAMAQREIGLSTGEPPVSRGYPPSVFALLPQLMERAG--NNQKGSITAFF 307 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VLVDGD+ NDPIAD RSILDGHIVL R L E+G YPP++ L S SR+ DK + + Sbjct: 308 TVLVDGDDMNDPIADQSRSILDGHIVLTRELTEQGFYPPINLLKSASRVMDKVVTKEHYN 367 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVF 430 L ++ +E + +G Y+ G+D LD A+ + I +FL QS + +S +++ Sbjct: 368 DFLKLKRVLSLIKENEVLVRVGAYKKGMDPELDNAMARKERIREFLTQSTQENVSFDEII 427 Query: 431 QEITKKLQ 438 K LQ Sbjct: 428 TNFRKVLQ 435 >gi|329888160|ref|ZP_08266758.1| flagellum-specific ATP synthase [Brevundimonas diminuta ATCC 11568] gi|328846716|gb|EGF96278.1| flagellum-specific ATP synthase [Brevundimonas diminuta ATCC 11568] Length = 357 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 155/337 (45%), Positives = 217/337 (64%), Gaps = 6/337 (1%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+ W GR+I++ G+PIDG L G + + + PPA +R RV + G+R +D+ Sbjct: 1 MRPTTAWLGRIIDSFGEPIDGLGPLTPGLVPYPLRAPPPPAHSRGRVGERLDLGVRAMDV 60 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 FT GQR+G+FAGSG+GKS LLSM AR D V++ L+GERGREVREFIE+ LG + Sbjct: 61 FTTTSRGQRLGIFAGSGVGKSVLLSMLARQATCDVVVVGLIGERGREVREFIEETLGEEG 120 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 LK++VVVVATSDE + R+ A + +AE+F +G VL ++DS+TRFA + REI + Sbjct: 121 LKRAVVVVATSDEPALKRRQAAYMTMAVAEFFRDQGLEVLCLMDSVTRFAMAQREIGLAA 180 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328 GE P +GY +VF+ELP+LLER GP E G ITA+ +VLVDG +H++PIAD+V Sbjct: 181 GEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTEAGPITALFTVLVDGGDHDEPIADAV 240 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R ILDGHIV++R +AE GR+P +D L SVSR S E++L + + + Sbjct: 241 RGILDGHIVMDRKIAERGRFPAIDVLKSVSRTMPGNQSPPERELNRRARQCLSAYSNMEE 300 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + IG YR G D I+D+A+ P + FL Q D++ Sbjct: 301 LIRIGAYRTGADPIVDRAIALNPALEGFLTQDKDDVT 337 >gi|146338576|ref|YP_001203624.1| flagellum-specific ATP synthase [Bradyrhizobium sp. ORS278] gi|146191382|emb|CAL75387.1| flagellum-specific ATP synthase [Bradyrhizobium sp. ORS278] Length = 441 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 149/327 (45%), Positives = 214/327 (65%), Gaps = 2/327 (0%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ PS W GRV+NA+G+PIDG L G + + PPA +R+RV G+R ++ Sbjct: 90 QVRPSPAWLGRVVNAMGEPIDGKGPLPSGAAPVPYRNNPPPAHSRKRVGAPLDLGVRALN 149 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 F C GQR+G+FAGSG+GKS LLSM AR+ +I L+GERGREV+EF++D LG + Sbjct: 150 TFLTCCRGQRLGIFAGSGVGKSVLLSMLARNVDAAVSVIGLIGERGREVQEFLQDDLGEE 209 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSDE ++R+ A + I+EYF +G +VL ++DS+TRFA + REI + Sbjct: 210 GLARSVVVVATSDEPALMRRQAAYLTLAISEYFRDEGKDVLCLMDSVTRFAMAQREIGLS 269 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A+GY +VF+ELP+LLER GP E G IT + +VLVDGD+HN+P+AD+VR IL Sbjct: 270 AGEPPTAKGYTPTVFTELPKLLERAGPGSGE-GTITGIFTVLVDGDDHNEPVADAVRGIL 328 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGH+V+ RS+AE GRYP ++ L SVSR K+ + ++ + + ++ + Sbjct: 329 DGHVVMQRSIAERGRYPAINILKSVSRTMPKSADPVFLPTIMRARQVMATYADMEELIRL 388 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419 G YR G +D+A+ + FL+Q Sbjct: 389 GAYRAGSSPEVDEAIRLHEPLETFLRQ 415 >gi|332297612|ref|YP_004439534.1| ATPase, FliI/YscN family [Treponema brennaborense DSM 12168] gi|332180715|gb|AEE16403.1| ATPase, FliI/YscN family [Treponema brennaborense DSM 12168] Length = 452 Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 168/371 (45%), Positives = 230/371 (61%), Gaps = 8/371 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ +N V + G + I +G V G R++ GRVI+A+GKP DG L Sbjct: 59 EVVGLNGTTVQLMAYGETKGIEIGCEVVATGHVLRVAVGNGLLGRVIDAVGKPYDGKGEL 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G L ++ P + R+ V + TG+R ID + GQR+G+FAGSG+GKSTLLS Sbjct: 119 ASG-LYYPALASPPAPLERRPVSQRMVTGVRAIDAMLAVAKGQRLGIFAGSGVGKSTLLS 177 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238 M AR+ D +I+LVGERGREV +FI+ LG+ LK+SVVVVATSD+ I R A TA Sbjct: 178 MIARNTKADVNVIALVGERGREVVDFIDRDLGEEGLKRSVVVVATSDQPSIARLRAAYTA 237 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +AEYF +G +V+L+ DS+TRFAH+ REI SGE P RGYP SVF LP+LLER G Sbjct: 238 TAVAEYFRDQGKDVMLMFDSVTRFAHAQREIGLASGEPPAQRGYPPSVFDLLPKLLERSG 297 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + G+ITA +VLVDGD+ ++PIAD VR LDGHIVLNR LA+ +P +D LAS+S Sbjct: 298 --TNQTGSITAFYTVLVDGDDMDEPIADKVRGTLDGHIVLNRKLAQAAHFPAIDVLASIS 355 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RL+ + ++ V+++ L+ + E D+ +G Y+ G + +DKA+ P I FL Sbjct: 356 RLSKRVSGPATQQAVTTVRRLMASYAENEDMITVGAYQKGSNAAIDKAIDVHPDIEAFLM 415 Query: 419 Q---SPSDLSS 426 Q P+ L S Sbjct: 416 QDEYEPAPLES 426 >gi|291278940|ref|YP_003495775.1| flagellar-specific ATP synthase FliI [Deferribacter desulfuricans SSM1] gi|290753642|dbj|BAI80019.1| flagellar-specific ATP synthase FliI [Deferribacter desulfuricans SSM1] Length = 436 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 180/439 (41%), Positives = 262/439 (59%), Gaps = 15/439 (3%) Query: 3 KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQ 61 K L+ L + D N VV G ++ I V T+ + +G +G N L + Sbjct: 2 KKLKLLKNINFD---NSVVVTGKVTKI--VGLTIEADGPLLSIGTRCEIEGVGGKNILAE 56 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFH--WGRFRISPSACWCGRVINALGKPIDGDDSL 119 ++ D V + P E I+ G +V + +G + S GRV++ LG+PID + + Sbjct: 57 IVGFKDDRVILMPYAESEGIAPGSIVRNVAYGNV-VKVSEELLGRVLDGLGRPIDSNRVI 115 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 +L + ++ P + R+ ++ TG++ ID + GQR+G+FAGSG+GKS LL Sbjct: 116 TNYELK-SVYTEPPSPLEREIIKDAIHTGVKAIDALITIGKGQRVGIFAGSGVGKSVLLG 174 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238 M AR+ D +I+L+GERGREVREFIE LG+ LKKSVVVVATSD+SP++RKM A Sbjct: 175 MIARNSSADVNVIALIGERGREVREFIERDLGEEGLKKSVVVVATSDQSPLVRKMGAFVA 234 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 TIAEYF S G +V+ ++DS+TRFA + REI GE P +GY SVF+ LP+LLER G Sbjct: 235 TTIAEYFRSLGKDVMFMMDSVTRFAMAQREIGLTVGEPPTTKGYTPSVFALLPKLLERAG 294 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 ++K +G IT + +VLV+GD+ NDPIADSVRSI+DGHIVL+R+LA + +P +D + S S Sbjct: 295 -TKKGEGTITGLYTVLVEGDDLNDPIADSVRSIIDGHIVLDRNLAAKNHFPAIDVMMSAS 353 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RL + + L LI + E D+ IG Y G + +D+A+ ++ +I +FLK Sbjct: 354 RLMKEIVDERHFEAAGRLRDLIATYREAEDLINIGAYVKGSNKKIDEAILKIDLINNFLK 413 Query: 419 QSPSDLSSEDVFQEITKKL 437 Q + S F+E K+L Sbjct: 414 QKIDETSP---FEETKKQL 429 >gi|254418613|ref|ZP_05032337.1| ATPase FliI/YscN family [Brevundimonas sp. BAL3] gi|196184790|gb|EDX79766.1| ATPase FliI/YscN family [Brevundimonas sp. BAL3] Length = 447 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 151/337 (44%), Positives = 214/337 (63%), Gaps = 6/337 (1%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+ W GR+I+A G PIDG L +G + + + PPA +R RV + G+R +D+ Sbjct: 91 VRPTTAWLGRIIDAFGNPIDGKGPLPQGPVPYPLRAPPPPAHSRGRVGERLDLGVRAMDV 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 FT C GQR+G+FAGSG+GKS LLSM A+ D V++ L+GERGREVREF+E+ LG + Sbjct: 151 FTTTCRGQRLGIFAGSGVGKSVLLSMLAKQATCDAVVVGLIGERGREVREFVEETLGEEG 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L+++VVVVATSDE + R+ + + IAEY + VL ++DS+TRFA + REI + Sbjct: 211 LRRAVVVVATSDEPALKRRQSAYMTMAIAEYLRDQDLEVLCLMDSVTRFAMAQREIGLAA 270 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328 GE P +GY +VF+ELP+LLER GP ITA+ +VLVDG +H++PIAD+V Sbjct: 271 GEPPTTKGYTPTVFTELPKLLERAGPGPVRPDGTTAAPITALFTVLVDGGDHDEPIADAV 330 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R ILDGHIV++R +AE GR+P +D L SVSR + E++L + + + Sbjct: 331 RGILDGHIVMDRKIAERGRFPAIDVLKSVSRTMPACQTPPERELNKRARQCLSAYANMEE 390 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + IG YR G D I+D+A+ P + DFL Q D + Sbjct: 391 LIKIGAYRTGADPIVDRAIALNPALEDFLSQDKDDAT 427 >gi|256750743|ref|ZP_05491628.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus CCSD1] gi|300914411|ref|ZP_07131727.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X561] gi|307724353|ref|YP_003904104.1| ATPase, FliI/YscN family [Thermoanaerobacter sp. X513] gi|320116081|ref|YP_004186240.1| FliI/YscN family ATPase [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|256750326|gb|EEU63345.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus CCSD1] gi|300889346|gb|EFK84492.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X561] gi|307581414|gb|ADN54813.1| ATPase, FliI/YscN family [Thermoanaerobacter sp. X513] gi|319929172|gb|ADV79857.1| ATPase, FliI/YscN family [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 432 Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 167/363 (46%), Positives = 235/363 (64%), Gaps = 5/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +V+ + VY+ P+G E I G V G+ R++ GRV++ LG PIDG Sbjct: 52 LAEVVGFKEEKVYLMPLGNMEGIGAGSKVIATGQTLRVNVGNELLGRVLDGLGNPIDGKG 111 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + K + S+ I + P + R+R+ + GI+ ID GQRIG+FAGSG+GKSTL Sbjct: 112 PI-KFEKSIPINNVPPDPLERKRIREVMSLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTL 170 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M AR+ D +I+L+GERGREV EF+E LG+ LKKSVVVVATSD ++R + Sbjct: 171 LGMMARNAKADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAM 230 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA IAEYF +G +VLL++DS+TRFA + RE+ + GE PV+RGY SVFS LP+LLER Sbjct: 231 TATAIAEYFRDQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLER 290 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S+K G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA + YP +D LAS Sbjct: 291 SGCSKK--GSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLAS 348 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + + + K+L++ ++ + E D+ IG Y G + +D+A+ + +F Sbjct: 349 VSRVINDIITEEHKELIARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIELNDKMNNF 408 Query: 417 LKQ 419 L+Q Sbjct: 409 LRQ 411 >gi|167037666|ref|YP_001665244.1| flagellar protein export ATPase FliI [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040327|ref|YP_001663312.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X514] gi|166854567|gb|ABY92976.1| flagellar protein export ATPase FliI [Thermoanaerobacter sp. X514] gi|166856500|gb|ABY94908.1| flagellar protein export ATPase FliI [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 437 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 167/363 (46%), Positives = 235/363 (64%), Gaps = 5/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +V+ + VY+ P+G E I G V G+ R++ GRV++ LG PIDG Sbjct: 57 LAEVVGFKEEKVYLMPLGNMEGIGAGSKVIATGQTLRVNVGNELLGRVLDGLGNPIDGKG 116 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + K + S+ I + P + R+R+ + GI+ ID GQRIG+FAGSG+GKSTL Sbjct: 117 PI-KFEKSIPINNVPPDPLERKRIREVMSLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTL 175 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M AR+ D +I+L+GERGREV EF+E LG+ LKKSVVVVATSD ++R + Sbjct: 176 LGMMARNAKADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAM 235 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA IAEYF +G +VLL++DS+TRFA + RE+ + GE PV+RGY SVFS LP+LLER Sbjct: 236 TATAIAEYFRDQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLER 295 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S+K G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA + YP +D LAS Sbjct: 296 SGCSKK--GSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLAS 353 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + + + K+L++ ++ + E D+ IG Y G + +D+A+ + +F Sbjct: 354 VSRVINDIITEEHKELIARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIELNDKMNNF 413 Query: 417 LKQ 419 L+Q Sbjct: 414 LRQ 416 >gi|114569221|ref|YP_755901.1| flagellum-specific ATP synthase [Maricaulis maris MCS10] gi|114339683|gb|ABI64963.1| flagellar protein export ATPase FliI [Maricaulis maris MCS10] Length = 448 Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 160/409 (39%), Positives = 238/409 (58%), Gaps = 7/409 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G ++++ + + LG + N +V+ + + P G E I Sbjct: 19 GRVTALNGLLVEAEGPKAGLSLGAHAKIETGNGIAECEVVGFRGETALMMPFGPLEGIRP 78 Query: 84 G-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G + R+ PS W GRV++ G+P+D L +G + P A R R+ Sbjct: 79 GARALLQPEAARVRPSRAWLGRVLDGFGRPLDDGVPLTEGGTPYPLKGNPPSAHARARLG 138 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + G+RV++ F P+ GQR+G+FAGSG+GKS L+SM AR+ D ++I L+GERGRE Sbjct: 139 ERMDMGVRVLNSFVPMRRGQRLGIFAGSGVGKSVLMSMLARACDADVIVIGLIGERGREA 198 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 REF++D LG + K+SVV+ TSD + R+ A +T AEYF +G +VL ++DS+TR Sbjct: 199 REFVDDVLGPEGRKRSVVITETSDAPALARRQAAHLTLTAAEYFRDQGLDVLCLMDSVTR 258 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK-----GNITAVISVLVD 316 FA + REI +GE P RGY SVF+ELPRLLER GP + K G+IT + +VLVD Sbjct: 259 FALAQREIGLAAGEPPTTRGYTPSVFAELPRLLERAGPGPQRKDGKKSGSITGLFTVLVD 318 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 GD+HN+PIAD+VR ILDGH+V++R++AE GRYP +D L SVSR A + + A E+ LV+ Sbjct: 319 GDDHNEPIADAVRGILDGHVVMSRAIAERGRYPAIDVLKSVSRTAPEVYDAAERPLVAEA 378 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + + + ++ +G Y G + +D+A+ + FL QS D + Sbjct: 379 RKHLSAYADMEELIRLGAYTQGSNPAVDRAIELNEPLEAFLGQSKDDAA 427 >gi|260893872|ref|YP_003239969.1| flagellar protein export ATPase FliI [Ammonifex degensii KC4] gi|260866013|gb|ACX53119.1| flagellar protein export ATPase FliI [Ammonifex degensii KC4] Length = 436 Score = 296 bits (758), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 184/431 (42%), Positives = 247/431 (57%), Gaps = 26/431 (6%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQYV---CL-----GDFVVHQGKNSDNLGQVIRINLDI 69 L Q G +S + + V + +V CL G +VV + D+ Sbjct: 15 TLCQQVGVVSKVVGLTLEVKGIKPFVGEVCLVELSPGKYVVAEAAG---------FREDV 65 Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P G I G V+ R F + GRV+N LG+PIDG L G + + + Sbjct: 66 VLLMPFGELTGIRPGCRVYPRRRPFTVRVGEHLLGRVLNGLGEPIDGK-PLPSG-IPLPV 123 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 ++ P + R+R+E+ F TG+R ID F GQRIG+FAGSG+GKSTLL M AR D Sbjct: 124 NNRPPSPLARRRIEEVFVTGVRAIDAFITCGRGQRIGIFAGSGVGKSTLLGMIARFGNAD 183 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+LVGERGREV EFIE LG+ L KSVVVVATSDE +LR A A TIAEYF Sbjct: 184 VNVIALVGERGREVLEFIEKDLGEEGLAKSVVVVATSDEPALLRLRAAFVATTIAEYFRD 243 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 G +VLL++DS+TRFA + RE+ GE P RGY SVF+ LPRLLER G KG+I Sbjct: 244 TGRHVLLLMDSLTRFALAQREVGLAVGEPPTTRGYTPSVFALLPRLLERAG--NAAKGSI 301 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T +VLV+GD+ N+PI D+ RSILDGHIVL+R LA+ YP +D LASVSRL + Sbjct: 302 TGFYTVLVEGDDLNEPITDAARSILDGHIVLSRQLAQANHYPAIDVLASVSRLMSAVVTP 361 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 + ++ L L+ + + D+ IG Y G + +D+A+ P + FL+Q P + +S Sbjct: 362 EHREAADLLRSLLAAYRQNEDLINIGAYVSGSNPTVDRAIALYPELVAFLRQKPEEYTS- 420 Query: 428 DVFQEITKKLQ 438 F E +L+ Sbjct: 421 --FPECVARLK 429 >gi|83859268|ref|ZP_00952789.1| flagellum-specific ATP synthase [Oceanicaulis alexandrii HTCC2633] gi|83852715|gb|EAP90568.1| flagellum-specific ATP synthase [Oceanicaulis alexandrii HTCC2633] Length = 436 Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 151/333 (45%), Positives = 213/333 (63%), Gaps = 1/333 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 I P W GRV+++ +P D L +GD+ + + P A +RQR+ + G+R +++ Sbjct: 89 IRPHKAWLGRVMDSFCRPQDSLGFLPEGDVEYALKGRPPGAHSRQRLGERLDLGVRAMNV 148 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 FTP+ GQR+GVFAGSG+GKS LLSM AR D ++I L+GERGRE REF+ED LG + Sbjct: 149 FTPMRLGQRLGVFAGSGVGKSVLLSMLARGSEADVIVIGLIGERGREAREFVEDVLGPEG 208 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ TSD + R+ A T + AEYF +G NVL ++DSITRFA + REI + Sbjct: 209 RARSVVITETSDAPALARRRACYTTMATAEYFRDQGLNVLCLMDSITRFALAQREIGLAA 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P RGY SVF+ELP LLER GP + G IT + +VLVDGD+HN+PIAD+VR ILD Sbjct: 269 GEPPTTRGYTPSVFAELPGLLERAGPGPQGTGTITGLFTVLVDGDDHNEPIADAVRGILD 328 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIV++RS+AE GR+P +D L S+SR A + ++ +E L L+ + + ++ +G Sbjct: 329 GHIVMSRSIAERGRFPAIDVLKSISRSAPEVYAPEEAPLAREARKLLAAYADMEELIRLG 388 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 Y G + +D+A+ + FL Q + SS Sbjct: 389 AYSSGSNPEVDRAIAVNEPLEAFLGQGKDETSS 421 >gi|307264870|ref|ZP_07546432.1| flagellar protein export ATPase FliI [Thermoanaerobacter wiegelii Rt8.B1] gi|326389480|ref|ZP_08211047.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus JW 200] gi|306920128|gb|EFN50340.1| flagellar protein export ATPase FliI [Thermoanaerobacter wiegelii Rt8.B1] gi|325994485|gb|EGD52910.1| ATPase, FliI/YscN family [Thermoanaerobacter ethanolicus JW 200] Length = 436 Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 168/363 (46%), Positives = 234/363 (64%), Gaps = 5/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +V+ + VY+ P+G E I G V G+ RI+ GRV++ LG PIDG Sbjct: 56 LAEVVGFKEEKVYLMPLGNMEGIGAGSKVIATGQTLRINVGNELLGRVLDGLGNPIDGKG 115 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + K + S+ I + P + R+R+ + GI+ ID GQRIG+FAGSG+GKSTL Sbjct: 116 PI-KFEKSIPINNVPPDPLERKRIREVIPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTL 174 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M AR+ D +I+L+GERGREV EF+E LG+ LKKSVVVVATSD ++R + Sbjct: 175 LGMMARNAKADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAM 234 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA IAEYF +G +VLL++DS+TRFA + RE+ + GE PV+RGY SVFS LP+LLER Sbjct: 235 TATAIAEYFRDQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLER 294 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S +KG+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA + YP +D LAS Sbjct: 295 SGCS--KKGSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLAS 352 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + + + K+L++ ++ + E D+ IG Y G + +D+A+ + F Sbjct: 353 VSRVINDIITEEHKELIARFKDILATYTEAEDLINIGAYNFGSNPKIDEAIELNEKMNSF 412 Query: 417 LKQ 419 L+Q Sbjct: 413 LRQ 415 >gi|150021149|ref|YP_001306503.1| flagellar protein export ATPase FliI [Thermosipho melanesiensis BI429] gi|149793670|gb|ABR31118.1| flagellar protein export ATPase FliI [Thermosipho melanesiensis BI429] Length = 434 Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 165/348 (47%), Positives = 229/348 (65%), Gaps = 9/348 (2%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 I S GRV++ALG+P+DG L K + I+ + P + R+R+ GIR ID Sbjct: 91 IPVSEELLGRVVDALGRPLDGKKILSKEKIP--IVREAPNPLIRKRITTPISVGIRAIDG 148 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDN 213 F L +GQRIG+FAGSG+GKSTLL M AR+ D +ISL+GERGREVREFIE D + Sbjct: 149 FLTLGYGQRIGIFAGSGVGKSTLLGMIARNTSADINVISLIGERGREVREFIEKDLKKEG 208 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 LK+S+VVV+TSD+ +LR A LTA +IAEYF KG NVLL++DS+TR+A + RE+ + Sbjct: 209 LKRSIVVVSTSDQPALLRVKALLTATSIAEYFRDKGYNVLLMVDSLTRWAMAQREVGLAT 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P RGYP SVF+ LP++LER G S +KG+IT + +VLV+ D+ N+PI+D+VR I+D Sbjct: 269 GEPPTTRGYPPSVFAGLPKILERAGNS--DKGSITGIYTVLVEADDFNEPISDTVRGIVD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHI+L+R LAE YP +D L SVSRL + + + K L LI + + +D+ +G Sbjct: 327 GHIILSRKLAESAHYPAIDVLMSVSRLMNDIVTKEHKISAMKLKDLIATYYDAKDLIDVG 386 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQ---EITKKL 437 Y+ G + +DK++ + I FLKQS + +S +D Q I KK+ Sbjct: 387 AYKKGTNPKIDKSIELIDEINKFLKQSIDESMSFDDTVQYLISIAKKI 434 >gi|260429606|ref|ZP_05783583.1| flagellum-specific ATP synthase [Citreicella sp. SE45] gi|260420229|gb|EEX13482.1| flagellum-specific ATP synthase [Citreicella sp. SE45] Length = 454 Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 163/398 (40%), Positives = 235/398 (59%), Gaps = 4/398 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82 G + S+ V L+ C+GD + + D L G+V+RI D+V + P E +S Sbjct: 23 GRVRSVDGTVIWVRGLAHVACIGDRL-RLFRGGDTLDGEVLRIRDDLVAMLPDEGAEGVS 81 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 GD V G ++PS W GRVI+ G+P+D D L G + PPA R+ + Sbjct: 82 QGDRVAVLGAPTLAPSDSWIGRVIDPYGQPLD-DMPLNPGPQRRPFRASPPPAARRRGLG 140 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 TG+ D P+ GQR+G+FAGSG+GKS LL+ A+ D V+++LVGERGREV Sbjct: 141 ARLPTGLSAFDTLLPIVRGQRVGLFAGSGVGKSRLLASLAQGMAADVVVLALVGERGREV 200 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 +F+ LG D + +SVVV ATSD SP+ R+ PL A+TIAE+F G +VL + DSITR Sbjct: 201 HDFVHTVLGEDGMARSVVVAATSDRSPLERRRCPLAAMTIAEHFRDNGRHVLFLADSITR 260 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + RE+A +GE P RG+P S ++ RL ER GP +G+IT V SVLV G + Sbjct: 261 FAEAHREVAVAAGETPALRGFPPSTAHQIMRLAERAGPGLPGQGDITGVFSVLVAGSDME 320 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD +R +LDGH+VL+R ++E GR+P +D L SVSR +A + +E ++ HL+ Sbjct: 321 EPIADILRGVLDGHVVLSREISERGRFPAIDVLRSVSRSLPEAATEEENAVLLQARHLLG 380 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + + + G YR G D +LD+A+ P + F+ + Sbjct: 381 AYARSETMIRAGLYREGEDPVLDQAIRAWPELDAFVGE 418 >gi|284989553|ref|YP_003408107.1| flagellar protein export ATPase FliI [Geodermatophilus obscurus DSM 43160] gi|284062798|gb|ADB73736.1| flagellar protein export ATPase FliI [Geodermatophilus obscurus DSM 43160] Length = 435 Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 159/402 (39%), Positives = 244/402 (60%), Gaps = 5/402 (1%) Query: 27 SSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85 S + ++ T++ +GD V ++ + L +V+ ++ + + P+G + G Sbjct: 20 SVVGAMGLTLSVEGAVAAVGDLVEINPSPSGGLLAEVVAVSRERLTCMPLGELSGVHAGA 79 Query: 86 LVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 V G ++ GRV++ LG+P+DG L + +++ S+ P A+ R RVE+ Sbjct: 80 RVRATGMPLQVPVGEALLGRVLDGLGRPVDGGPPLDQSLEFVDLASETPHALARTRVEEP 139 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204 +G+RV+D PL GQR+G+FAGSG+GKSTLL+ R D +I L+GERGREVRE Sbjct: 140 LASGVRVLDTMVPLGKGQRLGIFAGSGVGKSTLLAQITRGTDADVRVIGLIGERGREVRE 199 Query: 205 FIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 F+E+ LG + + ++VVVVATSDE P++R A A IAE F +G +VLL++DSITR A Sbjct: 200 FLEENLGAEGMARTVVVVATSDEPPLVRLKAAFVATRIAEGFRDQGRDVLLMMDSITRTA 259 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + RE+ ++GE P RGYP SVF+ +P+LLE+ G + G+IT + +VLVDGD+HN+P Sbjct: 260 MAQREVGLSAGEPPATRGYPPSVFAMMPKLLEKAGTA--AVGSITGLYTVLVDGDDHNEP 317 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383 IAD+ RSILDGH+VL R LA G +P +D L S+SR+A + + L+ Sbjct: 318 IADTARSILDGHVVLTRKLATAGHFPAIDVLESISRVATAVVPPAQMADAREVRRLMGAL 377 Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + +++ IG Y+ G D ++D+A P I FL+Q +L+ Sbjct: 378 RDVKELIEIGAYQAGTDPLVDRARQLAPAIESFLQQPTGELT 419 >gi|225159028|ref|ZP_03725338.1| Sodium-transporting two-sector ATPase [Opitutaceae bacterium TAV2] gi|224802407|gb|EEG20669.1| Sodium-transporting two-sector ATPase [Opitutaceae bacterium TAV2] Length = 461 Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 179/417 (42%), Positives = 246/417 (58%), Gaps = 10/417 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPVGIGEEI 81 G ++++T + + V LGD V + + + + +V+ + V + P+G + Sbjct: 38 GRVAAVTGLI--IESEGPNVGLGDICVIRSERDAFEVMAEVVGFRGERVLLMPLGETTGL 95 Query: 82 SLGDLVFHWGRFRISPS-ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 G V R I S A GRV++ALG+P DG + + + S+ P + RQR Sbjct: 96 HAGCSVSAGDRPPIPVSGAQLLGRVLDALGRPFDGAGPVPTRRVDA-VHSRPPHPLRRQR 154 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 + + TG+R +D FTPL GQR+G+FAGSG+GKSTLL M AR D V+I LVGERGR Sbjct: 155 IREALPTGVRALDAFTPLGRGQRLGLFAGSGVGKSTLLGMIARGSAADVVVIGLVGERGR 214 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EVREF+E LG + L +SVVVVATSD LR A TA IAE + +G NVLL++DS+ Sbjct: 215 EVREFLEKDLGAEGLARSVVVVATSDSPAPLRLRAAFTATAIAESYRDQGKNVLLLMDSV 274 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA + REI GE P RGY SVF+ LPRLLER G E G ITA+ +VLV+GD+ Sbjct: 275 TRFAMAQREIGLAIGEPPATRGYTPSVFALLPRLLERAGAG--ETGAITALYTVLVEGDD 332 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 N+PIAD+VR ILDGH+VL+R+LA YP +D L SVSRL SA E + + L Sbjct: 333 MNEPIADAVRGILDGHLVLSRALAHANHYPAIDVLESVSRLTRDICSATEVESAARAREL 392 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITK 435 + ++ D+ IG Y+ G LD+AV + FL+Q ++ + DVF + + Sbjct: 393 LAIYKRNEDLITIGAYQKGASAALDRAVTLHEPLKQFLRQRVDEIVARADVFNRLAE 449 >gi|169827123|ref|YP_001697281.1| flagellum-specific ATP synthase [Lysinibacillus sphaericus C3-41] gi|168991611|gb|ACA39151.1| Flagellum-specific ATP synthase [Lysinibacillus sphaericus C3-41] Length = 441 Score = 295 bits (756), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 162/365 (44%), Positives = 236/365 (64%), Gaps = 9/365 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDG 115 L +V+ +IV + P EIS+G LV G ++ P G+V++++G PIDG Sbjct: 58 LAEVVGFKDEIVVLMPFTSLREISIGCLVEGTGAPLEVKVGPE--LIGKVLDSMGNPIDG 115 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 L KG +++ P + R + + + G++ ID + +GQR+G+FAGSG+GKS Sbjct: 116 T-LLPKGLMTVPTEQDPPNPLTRPPINERLEVGVKAIDGMLTVGNGQRVGIFAGSGVGKS 174 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234 TLL M AR+ D +I+L+GERGREVREFIE LG + L +S+VV ATSD+ ++R Sbjct: 175 TLLGMIARNTQADLNVIALIGERGREVREFIERDLGPEGLSRSIVVAATSDQPALMRIKG 234 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA IAEYF ++G NV+L++DS+TR A + REI +GE P +GY SVF+ LP+LL Sbjct: 235 AFTATAIAEYFRNRGLNVMLMMDSVTRVAMAQREIGLATGEPPAQKGYTPSVFAILPKLL 294 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G +EK G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L Sbjct: 295 ERTGTNEK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRNLANKGQYPAINVL 352 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 SVSRL + + + KK L L + ++++ D+ IG Y+ G +D+A+H P+I Sbjct: 353 KSVSRLMNHVAAPEHKKAAERLRELYYTYDKSEDLINIGAYKRGTSREIDEAIHYEPLIT 412 Query: 415 DFLKQ 419 +LKQ Sbjct: 413 TYLKQ 417 >gi|284041512|ref|YP_003391852.1| flagellar protein export ATPase FliI [Conexibacter woesei DSM 14684] gi|283945733|gb|ADB48477.1| flagellar protein export ATPase FliI [Conexibacter woesei DSM 14684] Length = 489 Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 158/334 (47%), Positives = 214/334 (64%), Gaps = 3/334 (0%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 FRI GRVI+ LGKPIDG G + P ++R R+++ G+R + Sbjct: 107 FRIRVGQDLLGRVIDGLGKPIDGMPRATNGH-PRSTNASPPDPLDRPRIDQRVDLGVRAL 165 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 D P GQR+G+FAGSG+GKS+LL M ARS D +I+LVGERGREV+EF+E LGD Sbjct: 166 DALVPCGRGQRLGIFAGSGVGKSSLLGMIARSTTADVNVIALVGERGREVKEFVERDLGD 225 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVVVVATSD+ ++R A TA IAE+F +G++V+L++DS+TRFA + RE+ Sbjct: 226 ALSRSVVVVATSDQPALVRIKAAFTATAIAEHFRDQGNDVMLMMDSVTRFAMAQREVGLA 285 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE P RGY SVF++LPRLLER G + G+IT + +VLVDGD+ N+PIAD+VRSIL Sbjct: 286 IGEPPATRGYTPSVFAQLPRLLERSGTA--RTGSITGLYTVLVDGDDMNEPIADAVRSIL 343 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGH+VL R LA YP +D L SVSRL + S + + ++ L+ ++E D+ I Sbjct: 344 DGHVVLTRELAHASHYPAIDVLQSVSRLVGEIVSPEVRAAGQAVRQLMASYKEKEDLIAI 403 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 G Y+ G D +D A+ P + FLKQ P + SS Sbjct: 404 GAYQGGTDPTVDAAIALRPQLDRFLKQRPDEKSS 437 >gi|126653746|ref|ZP_01725664.1| flagellum-specific ATP synthase [Bacillus sp. B14905] gi|126589710|gb|EAZ83846.1| flagellum-specific ATP synthase [Bacillus sp. B14905] Length = 441 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 162/365 (44%), Positives = 235/365 (64%), Gaps = 9/365 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDG 115 L +V+ +IV + P EIS+G LV G ++ P G+V++++G PIDG Sbjct: 58 LAEVVGFKDEIVVLMPFTSLREISIGCLVEGTGAPLEVKVGPE--LIGKVLDSMGNPIDG 115 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 L KG +++ P + R + + + G++ ID + +GQR+G+FAGSG+GKS Sbjct: 116 T-LLPKGLMTVPTEQDPPNPLTRPPINERLEVGVKAIDGMLTVGNGQRVGIFAGSGVGKS 174 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234 TLL M AR+ D +I+L+GERGREVREFIE LG + L +S+VV ATSD+ ++R Sbjct: 175 TLLGMIARNTQADLNVIALIGERGREVREFIERDLGPEGLSRSIVVAATSDQPALMRIKG 234 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA IAEYF ++G NV+L++DS+TR A + REI +GE P +GY SVF+ LP+LL Sbjct: 235 AFTATAIAEYFRNRGLNVMLMMDSVTRVAMAQREIGLATGEPPAQKGYTPSVFAILPKLL 294 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G +EK G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L Sbjct: 295 ERTGTNEK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRNLANKGQYPAINVL 352 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 SVSRL + + KK L L + ++++ D+ IG Y+ G +D+A+H P+I Sbjct: 353 KSVSRLMNHVAEPEHKKAAERLRELYYTYDKSEDLINIGAYKRGTSREIDEAIHYEPLIT 412 Query: 415 DFLKQ 419 +LKQ Sbjct: 413 TYLKQ 417 >gi|114762158|ref|ZP_01441626.1| H+-transporting two-sector ATPase, alpha/beta subunit [Pelagibaca bermudensis HTCC2601] gi|114545182|gb|EAU48185.1| H+-transporting two-sector ATPase, alpha/beta subunit [Roseovarius sp. HTCC2601] Length = 453 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 162/414 (39%), Positives = 244/414 (58%), Gaps = 5/414 (1%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 LAQ+ + V G + S+ V L+ C+GD + + + G+V+RI Sbjct: 10 LAQITQIRPARAV---GRVRSVDGTVIWVRGLAHLACIGDRLRLYHADGELGGEVLRIRD 66 Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 D+V + P E +S D V G ++PS W GRVI+ G+P+DG SL G L Sbjct: 67 DLVAMLPDEGPEGVSQDDRVAVLGPPVLAPSNDWVGRVIDPYGQPLDGR-SLSSGSLRRP 125 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + PPA R+ + ++G+ D F P+ GQR+G+FAGSG+GKS LL+ AR Sbjct: 126 FRASPPPAAQRRGLGGRLRSGLAAFDTFLPIVRGQRVGLFAGSGVGKSRLLASLARGVEA 185 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D V+++L+GERGREV +F+ D LG + + +SVV+ A+SD SP+ R+ L A+T+AE+F Sbjct: 186 DVVVLALIGERGREVHDFVHDVLGPEGMARSVVIAASSDRSPLERRRCALAAMTVAEHFR 245 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 G VL + DSITRFA + RE+A +GE+P RG+P S +++ RL ER GP G+ Sbjct: 246 DTGRQVLFLADSITRFAEAHREVAVAAGEMPALRGFPPSTANQIMRLAERAGPGLAGSGD 305 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA+ SVLV G + +PIAD +R +LDGH+VL+R +AE GR+P ++ L SVSR +A + Sbjct: 306 ITAIFSVLVAGSDMEEPIADILRGVLDGHVVLSREIAERGRFPAINVLRSVSRSLPEAAT 365 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +E ++ HL+ + + + G YR G D +LD+A+ P + F ++ Sbjct: 366 EEENDVLLQARHLLGAYARSETMIRAGLYREGEDPLLDQAIRAWPDLDTFFSEA 419 >gi|325921919|ref|ZP_08183730.1| Type III secretion system ATPase HrcN protein [Xanthomonas gardneri ATCC 19865] gi|325547621|gb|EGD18664.1| Type III secretion system ATPase HrcN protein [Xanthomonas gardneri ATCC 19865] Length = 438 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 162/374 (43%), Positives = 227/374 (60%), Gaps = 5/374 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + + + P G +S V GR P GRV++ LG+P DG + Sbjct: 59 EVVGFSRHLALLAPFGELVGLSRETRVIGSGRPLAVPVGEALLGRVLDGLGEPADGQGPV 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 GD ++I ++ P M R+ +E+ TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 119 -AGDGWVQIQAQAPDPMRRRLIEQPLPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 177 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 178 MFARGTQCDVNVIVLIGERGREVREFIEMILGPDGLARSVVVCATSDRSSIERAKAAYVG 237 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 238 TAIAEYFRDQGMRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 297 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D L S+S Sbjct: 298 MGET--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLGSLS 355 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + SA++++ L L+ ++ E + +G YR G D + D+A+ ++ I DFL Sbjct: 356 RVMSQIVSAEQRQYAGQLRRLLAKYNEVETLLQVGEYRQGSDAVADEAIARIDAIRDFLS 415 Query: 419 QSPSDLSSEDVFQE 432 QS LS D E Sbjct: 416 QSTDQLSDYDATLE 429 >gi|224419099|ref|ZP_03657105.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT 98-5491] gi|253828036|ref|ZP_04870921.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT 98-5491] gi|313142608|ref|ZP_07804801.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT 98-5491] gi|253511442|gb|EES90101.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT 98-5491] gi|313131639|gb|EFR49256.1| flagellum-specific ATP synthase [Helicobacter canadensis MIT 98-5491] Length = 432 Score = 295 bits (754), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 178/437 (40%), Positives = 256/437 (58%), Gaps = 17/437 (3%) Query: 7 TLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRI 65 +LA L E + NL G I+ + + + LS LGD V +NS+ +G V + Sbjct: 2 SLANLRERLNHLNLSPTFGLITKVEQGFLSANGLSP--SLGDIVRIVSENSNTIGMVTTL 59 Query: 66 NLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124 I P E +GD V+ + +I GRVIN LG+PIDG KGDL Sbjct: 60 EGGSFKITPFSFVEGTKVGDKVYLNTKGLQIPVGLELLGRVINPLGEPIDG-----KGDL 114 Query: 125 S----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 M I+ + AM R +++ F G++ ID GQ++G+FAGSG+GKSTL+ M Sbjct: 115 RAEGVMPIIRQPIAAMKRGMIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGM 174 Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240 R +I+L+GERGREV EF+E LG +L +V++VATSD+SP++RK A++ Sbjct: 175 IVRGAQAKIKVIALIGERGREVPEFVEKNLGGDLTNTVLIVATSDDSPLMRKYGAFAAMS 234 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 +AEYF +KG++VL ++DS+TRFA + REI GE P ++GYP SV + LP+L+ER G Sbjct: 235 VAEYFKAKGEDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG-K 293 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 E+ KG+ITA +VLV+GD+ +DPIAD RSILDGHIVL+RSL + G YPP++ L S SRL Sbjct: 294 EEGKGSITAYFTVLVEGDDMSDPIADQSRSILDGHIVLDRSLTDFGIYPPINILNSASRL 353 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + + L +E + IG Y+ G D +D+A+ + + D+L+QS Sbjct: 354 MNDIAQKEHILAARKFRRLYSILKENEVLIRIGAYQAGSDKEMDEAIAKKEDMEDYLRQS 413 Query: 421 PSDLSSEDVFQEITKKL 437 ++ +QE TKKL Sbjct: 414 YDEVWD---YQESTKKL 427 >gi|117928052|ref|YP_872603.1| flagellar protein export ATPase FliI [Acidothermus cellulolyticus 11B] gi|117648515|gb|ABK52617.1| type III secretion system ATPase, FliI/YscN [Acidothermus cellulolyticus 11B] Length = 439 Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 174/403 (43%), Positives = 245/403 (60%), Gaps = 19/403 (4%) Query: 32 VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG 91 V ++T +GD V+ +G+ L +V+ ++ + + P+G +++G LV G Sbjct: 33 VGLSITAAGIRAAIGDVVIVEGRQP-TLAEVVALHDESLACMPLGDVSGVAVGALVTPTG 91 Query: 92 RFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPP-AMNRQRVEKGFK 146 P GRV++ LG+PIDG KG+L I + PP + R R+ + Sbjct: 92 GPLTVPVGDALLGRVLDGLGRPIDG-----KGELRDTIRVGLDATPPHPLRRTRISEQLS 146 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206 G+RV+D TP GQR+G+FAGSG+GKS+LLSM AR D +I+LVGERGREVREF+ Sbjct: 147 LGVRVLDTMTPCGRGQRLGIFAGSGVGKSSLLSMIARGTEADVSVIALVGERGREVREFL 206 Query: 207 EDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 E+ LG + L +SVVVVATSDE +LR A A IAE+F G +V+L++DSITRFA + Sbjct: 207 ENDLGEEGLARSVVVVATSDEPALLRLRAAFVATRIAEWFRDLGRHVILMMDSITRFAMA 266 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 REI + GE RGYP SVF+ LP+LLER G E G+IT + +VLV+GD+ N+PIA Sbjct: 267 QREIGLSVGEPAATRGYPPSVFALLPKLLERAGAG--EHGSITGLYTVLVEGDDMNEPIA 324 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 D+ RSILDGH+ L+R LA G YP VD L S+SRL +A ++ + L ++ + Sbjct: 325 DTARSILDGHVTLSRRLATSGHYPAVDVLESISRLTGAITTAQQRDDATFLRRILAAHRD 384 Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ-----SPSD 423 R++ IG Y PG + +D A+ P I DFL+Q +P+D Sbjct: 385 ARELIDIGAYVPGSNPDVDTALRLQPRITDFLRQDIRAVTPAD 427 >gi|108762697|ref|YP_630662.1| FliI/YscN family ATPase [Myxococcus xanthus DK 1622] gi|108466577|gb|ABF91762.1| ATPase, FliI/YscN family [Myxococcus xanthus DK 1622] Length = 437 Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 167/398 (41%), Positives = 236/398 (59%), Gaps = 8/398 (2%) Query: 43 VCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100 V +G+ V+ + +N + +V+ D V + P+G I V G+ I Sbjct: 39 VRVGELVLIKSRNRGAVKAEVVGFQGDEVMLMPLGELHGIGPDSEVIPTGKPLSIKCGEA 98 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV+N +G+P+DG +G + + P RQR+E+ G+R ID + Sbjct: 99 LLGRVLNGIGEPMDGHPLPEEGLIDWSVDRDCPDPFTRQRIERPLPLGVRCIDGLLTVGE 158 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FAGSG+GKSTL+ AR+ D +++L+GERGREVREFIED +G + +K+SV+ Sbjct: 159 GQRVGLFAGSGVGKSTLMGQIARNTKADLCVVALIGERGREVREFIEDAMGEEGMKRSVL 218 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATSD+ ++R A A IAEYF +G NVL +LD++TR A + REI GE P Sbjct: 219 VCATSDQPSLVRLRAAYVATAIAEYFRERGGNVLFMLDTVTRLARAQREIGLAVGEPPAR 278 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVFS LPR+LER G S EKG TA+ + LV G + +PIAD VR ILDGH +LN Sbjct: 279 QGYPPSVFSMLPRILERTGNS--EKGKCTAIYTCLVAGGDMEEPIADEVRGILDGHFILN 336 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+L E ++P +D LAS+SR+ S D KK L L+ +E+ RD+ L+G Y+ G Sbjct: 337 RALGERNQWPAMDVLASLSRVMSGIVSKDHKKAAGRLRELLSTYEKQRDLILLGAYQYGT 396 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D D+A+ + I DFLKQ D S F+E ++L Sbjct: 397 DPRTDQAIDKYDAIIDFLKQ---DTHSNSGFEETVEQL 431 >gi|296274002|ref|YP_003656633.1| FliI/YscN family ATPase [Arcobacter nitrofigilis DSM 7299] gi|296098176|gb|ADG94126.1| ATPase, FliI/YscN family [Arcobacter nitrofigilis DSM 7299] Length = 435 Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 167/409 (40%), Positives = 242/409 (59%), Gaps = 7/409 (1%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNS--DNLGQVIRINLDIVYICPV 75 NL++ G I+ I+S T+ + V +GD V + ++ LG + + D I P Sbjct: 15 NLIIPFGRITHISST--TIKAVGIEVAVGDIVKIESQHHLYTVLGMIASVESDGFKIVPF 72 Query: 76 GIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134 E + D VF + GRV+NALG+PID + + + I P Sbjct: 73 SFIEGFRINDKVFLQKDGLTVKSGYGLLGRVVNALGEPIDKKGKVKDLEQNSAINKLSIP 132 Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194 A+ R +++ F TG++ ID GQ++G+FAGSG+GKSTL+ M + +++L Sbjct: 133 ALERGIIDERFSTGVKAIDSMLTSGKGQKVGIFAGSGVGKSTLMGMIVKGCEAQIKVVAL 192 Query: 195 VGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 +GERGRE+ EFI L +NL+ ++++ ATSDES ++RK TA+ IAE+F KG +VLL Sbjct: 193 IGERGREIPEFIHYNLNNNLENTIIIAATSDESALMRKYGAFTAMAIAEFFRDKGHDVLL 252 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DS+TRFA + REI + GE PV+RGYP SVF+ LP+L+ER G + E G+ITA +VL Sbjct: 253 MMDSVTRFAMAQREIGLSIGEPPVSRGYPPSVFALLPQLMERAGNT--ELGSITAFFTVL 310 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 VDGD+ NDPIAD RSILDGHIVL R L E+G+YPP+D L S SR+ DK S + Sbjct: 311 VDGDDMNDPIADQSRSILDGHIVLTRELTEQGQYPPIDLLRSASRVMDKVVSPEHYNGFL 370 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L ++ +E + +G Y+ G+D LD A+ + I FL Q S+ Sbjct: 371 KLKRVLSLIKENEILIRVGAYKQGMDKELDDALAKREKIKTFLFQGTSE 419 >gi|304316905|ref|YP_003852050.1| ATPase, FliI/YscN family [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778407|gb|ADL68966.1| ATPase, FliI/YscN family [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 438 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 173/411 (42%), Positives = 255/411 (62%), Gaps = 16/411 (3%) Query: 17 KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPV 75 K+ + G +S + + T+ + +GD + N + + +V+ D VY+ P+ Sbjct: 17 KSFIKYYGKVSQVVGL--TIESIGPISNVGDVCEIKSINGNTIYAEVMGFKDDKVYLMPL 74 Query: 76 GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM---SK 131 G + I G+ V G + +I GRVI+ALG PIDG KG + + + + Sbjct: 75 GDMDGIGPGNSVISTGQKLKIGVGEELLGRVIDALGNPIDG-----KGPIKFKKLVSTNN 129 Query: 132 VPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 VPP + R+R+ + GI+ ID GQRIG+FAGSG+GKSTLL M AR+ D Sbjct: 130 VPPNPIERKRIREAMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMIARNAKSDIN 189 Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I+L+GERGREV EFIE LG D LK+S++VV+TSD ++R +TA +IAEYF +G Sbjct: 190 VIALIGERGREVNEFIEKDLGEDGLKRSILVVSTSDTPALMRVKGAMTATSIAEYFRDQG 249 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VL ++DS+TRFA + REI + GE PV+RGY SVFS LP+LLER G ++ G+ITA Sbjct: 250 LDVLFMMDSVTRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERAGSAKN--GSITA 307 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLVDGD+ N+PI D+VR ILDGHIVL+R LA +G+YP +D LAS+SR+ + S + Sbjct: 308 LYTVLVDGDDLNEPITDAVRGILDGHIVLSRKLANKGQYPAIDILASISRVMNDIVSDEH 367 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 K L S ++ +EE+ D+ IG Y G + +D+A+ + +++KQ+ Sbjct: 368 KNLSSKFKSILSVYEESEDLINIGAYAKGSNPKIDEAILLHDDMINYIKQT 418 >gi|83647858|ref|YP_436293.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396] gi|83635901|gb|ABC31868.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396] Length = 456 Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 156/362 (43%), Positives = 226/362 (62%), Gaps = 3/362 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + VY+ P+ E + G V G RI AC GRV++ G+P+DG L Sbjct: 60 EVVGFSDERVYLMPLAAVEGLQPGAKVKPMSGVGRIGVGACLLGRVLDGAGEPLDGRGPL 119 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + +E+ ++R + + GIR I+ + GQR+G+FAGSG+GKS LL Sbjct: 120 -QAEHHVELFGAPINPLHRAPIREKLDVGIRAINSLLTVGIGQRLGLFAGSGVGKSMLLG 178 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238 M R D +++ LVGERGREV+EFIED LG+ L+++VVV + +D+SP++R A + Sbjct: 179 MMTRFTTADIIVVGLVGERGREVKEFIEDILGEEGLRRAVVVASPADDSPLMRLRAAVLT 238 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LP+L+ER G Sbjct: 239 TRIAEYFRDLGKNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPQLVERAG 298 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + G+ITA +VL +GD+ DPIAD+ R+ILDGHIVLNR LAEEG YP +D AS+S Sbjct: 299 NGKPGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLNRRLAEEGHYPAIDVEASIS 358 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + D + L R+++TRD+ +G Y PG D D A+ + P + FL+ Sbjct: 359 RVMPQVTTPDYLQRAQRFKQLYARYQQTRDLISVGAYAPGSDKETDYAIERFPHMRKFLQ 418 Query: 419 QS 420 QS Sbjct: 419 QS 420 >gi|227873550|ref|ZP_03991793.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268] gi|227840596|gb|EEJ50983.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268] Length = 436 Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 158/344 (45%), Positives = 224/344 (65%), Gaps = 5/344 (1%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 R R+ GR+I+A G P+DG + + D S + P ++R + + GI+ Sbjct: 89 RLRVPVGDFLKGRIIDAQGNPMDGGEPFPESDFYTVNNSYMNP-LDRPPIRERLHFGIKA 147 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 ID + GQRIG+FAGSG+GKSTL+ M AR+ D +I+LVGERGRE+ EF+E +G Sbjct: 148 IDGLNTVGKGQRIGIFAGSGVGKSTLMGMIARNVKTDINVIALVGERGREILEFVEKDMG 207 Query: 212 D-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + +K++V+VVATSD+ +LR APL A TIAEYF +G +VLL++DS+TRFA + REI Sbjct: 208 EEGMKRTVLVVATSDQPAMLRLKAPLVATTIAEYFRDRGMDVLLMMDSLTRFAMAQREIG 267 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 +GE P+ARGY S+++E PRLLER G +K G+IT V +VLV+GD+ N+PIAD+VR Sbjct: 268 LATGEPPIARGYTPSIYAEFPRLLERAGAFKK--GSITGVYTVLVEGDDTNEPIADTVRG 325 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 ILDGHIVL+R+LA E YP +D S+SRL + S + KK S + + + +++ D+ Sbjct: 326 ILDGHIVLSRALAAENHYPAIDIGMSISRLMAELVSQEHKKYASRMRNTLGLYQKNADLI 385 Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433 IG Y+ G D LD+AV + P I DFL Q + S ED ++ Sbjct: 386 AIGAYKKGTDPKLDEAVDKYPAINDFLMQGTGEAFSYEDTVMQM 429 >gi|188992464|ref|YP_001904474.1| type III secretion system ATPase [Xanthomonas campestris pv. campestris str. B100] gi|167734224|emb|CAP52432.1| type III secretion system ATPase [Xanthomonas campestris pv. campestris] Length = 438 Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 162/374 (43%), Positives = 225/374 (60%), Gaps = 5/374 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + + + P G +S V GR P + GRV++ LG+P DG L Sbjct: 59 EVVGFSRTLALLAPFGELVGLSRQTRVIGLGRPLAVPVGSALLGRVLDGLGEPADGQGPL 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 GD ++I ++ P M R+ +E+ TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 119 -AGDDWVQIQAQAPDPMRRRLIEQPLPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 177 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 178 MFARGTQCDVNVIVLIGERGREVREFIEMILGPDGLARSVVVCATSDRSSIERAKAAYVG 237 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 238 TAIAEYFRDRGMRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 297 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A +YP +D L S+S Sbjct: 298 MGET--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAARNQYPAIDVLGSLS 355 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + SA++++ L L+ + E + +G YR G D + D+A+ ++ I DFL Sbjct: 356 RVMSQIVSAEQRQYAGQLRRLLAKHNEVETLLQVGEYRHGSDAVADEAIARIDAIRDFLS 415 Query: 419 QSPSDLSSEDVFQE 432 Q LS D E Sbjct: 416 QPTDQLSDYDTILE 429 >gi|289578431|ref|YP_003477058.1| flagellar protein export ATPase FliI [Thermoanaerobacter italicus Ab9] gi|297544707|ref|YP_003677009.1| flagellar protein export ATPase FliI [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528144|gb|ADD02496.1| flagellar protein export ATPase FliI [Thermoanaerobacter italicus Ab9] gi|296842482|gb|ADH60998.1| flagellar protein export ATPase FliI [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 437 Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 165/361 (45%), Positives = 233/361 (64%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + VY+ P+G E I G V G+ R+S GR+++ LG PID + Sbjct: 59 EVVGFKEEKVYLMPLGNMEGIGAGSKVIATGQTLRVSVGKELLGRILDGLGNPIDSKGPV 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 K + S+ I + P + R+R+ + GI+ ID GQRIG+FAGSG+GKSTLL Sbjct: 119 -KFEKSIPINNVPPDPLERKRIREVMPLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLG 177 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238 M AR+ D +I+L+GERGREV EF+E LG+ LKKSVVVVATSD ++R +TA Sbjct: 178 MMARNAKADLNVIALIGERGREVNEFLEKDLGEEGLKKSVVVVATSDTPALIRVKGAMTA 237 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G +VLL++DS+TRFA + RE+ + GE PV+RGY SVFS LP+LLER G Sbjct: 238 TAIAEYFRDQGLDVLLMMDSVTRFAMAQREVGLSIGEAPVSRGYTPSVFSVLPKLLERSG 297 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 S+K G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA + YP +D LASVS Sbjct: 298 CSKK--GSITALYTVLVDGDDLNEPIADAVRGILDGHIVLSRKLANKNHYPAIDVLASVS 355 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + K+L++ ++ + E D+ IG Y G + +D+A+ + +FL+ Sbjct: 356 RVMNDIITEEHKELIARFKDILASYTEAEDLINIGAYNFGSNPKIDEAIELNDKMNNFLR 415 Query: 419 Q 419 Q Sbjct: 416 Q 416 >gi|299534784|ref|ZP_07048114.1| flagellum-specific ATP synthase [Lysinibacillus fusiformis ZC1] gi|298729872|gb|EFI70417.1| flagellum-specific ATP synthase [Lysinibacillus fusiformis ZC1] Length = 444 Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 161/365 (44%), Positives = 234/365 (64%), Gaps = 9/365 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDG 115 L +V+ +IV + P EIS+G LV G ++ P G+V++++G PIDG Sbjct: 61 LAEVVGFKDEIVVLMPFTSLREISIGCLVEGTGAPLEVKVGPE--LIGKVLDSMGNPIDG 118 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 L +G +++ P + R + + + G++ ID + +GQR+G+FAGSG+GKS Sbjct: 119 T-LLPRGLMTVPTEQDPPNPLTRPPINERLEVGVKAIDGMLTVGNGQRVGIFAGSGVGKS 177 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234 TLL M AR+ D +I+L+GERGREVREFIE LG + L +S+VV ATSD+ ++R Sbjct: 178 TLLGMIARNTQADLNVIALIGERGREVREFIERDLGAEGLSRSIVVAATSDQPALMRIKG 237 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA IAEYF ++G NV+L++DS+TR A + REI +GE P +GY SVF+ LP+LL Sbjct: 238 AFTATAIAEYFRNRGLNVMLMMDSVTRVAMAQREIGLATGEPPAQKGYTPSVFAILPKLL 297 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G +EK G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L Sbjct: 298 ERTGTNEK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRNLANKGQYPAINVL 355 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 SVSRL + KK L L + ++++ D+ IG Y+ G +D+A+H P+I Sbjct: 356 KSVSRLMNHVAEPTHKKAAERLRELYYTYDKSEDLINIGAYKRGTSKEIDEAIHYEPLIT 415 Query: 415 DFLKQ 419 +LKQ Sbjct: 416 AYLKQ 420 >gi|254509752|ref|ZP_05121819.1| H+-transporting two-sector ATPase, flagellum-specific [Rhodobacteraceae bacterium KLH11] gi|221533463|gb|EEE36451.1| H+-transporting two-sector ATPase, flagellum-specific [Rhodobacteraceae bacterium KLH11] Length = 454 Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 158/387 (40%), Positives = 237/387 (61%), Gaps = 3/387 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S +T + L+Q +GD + + D G+V+ ++ D +++ P + +S Sbjct: 24 GRVSGVTGGVIRIDGLAQRARIGDHLTLRRNSGPDLQGEVLHVDADQIHMLPGAAPDGVS 83 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 LGD V +P W GRVI+ G P+DG L G ++M P A++R+ + Sbjct: 84 LGDPVSLDQLPAFAPGMHWLGRVIDPFGAPLDGKPLL-PGTQECDLMQTPPAAVSRKPLG 142 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 +TG+ +++ P+ GQRIG+FAGSG+GKSTLL+ AR+ D V+++LVGERGREV Sbjct: 143 ARMETGLAILNTMLPIVQGQRIGLFAGSGVGKSTLLATLARTMQADAVVVALVGERGREV 202 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 EF+E LG D +++SVVV ATSD+S + R+ +A+++AEY +G NVL + DS+TR Sbjct: 203 NEFVETALGADGMRRSVVVAATSDQSALARRRCAWSAMSVAEYLRDQGLNVLFLADSVTR 262 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + REIA +GE RG+P SV + L ER GP ++G+ITAV SVLV G + + Sbjct: 263 FAEAHREIAVATGESASLRGFPPSVTPLIANLCERAGPGTAQQGDITAVFSVLVAGSDMD 322 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD +R +LDGHIVL+R +AE GRYP +D SVSR A + DE ++++ L+ Sbjct: 323 EPIADILRGVLDGHIVLSRDIAERGRYPAIDLSKSVSRSLPGAATEDENQVITDARKLVG 382 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVH 408 +E++ + G Y G D +LD+AV Sbjct: 383 SYEQSEVMIKAGLYAEGADPLLDRAVR 409 >gi|21230693|ref|NP_636610.1| type III secretion system ATPase [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769312|ref|YP_244074.1| type III secretion system ATPase [Xanthomonas campestris pv. campestris str. 8004] gi|21112282|gb|AAM40534.1| HrpB6 protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574644|gb|AAY50054.1| HrpB6 protein [Xanthomonas campestris pv. campestris str. 8004] Length = 442 Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 162/374 (43%), Positives = 225/374 (60%), Gaps = 5/374 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + + + P G +S V GR P + GRV++ LG+P DG L Sbjct: 63 EVVGFSRTLALLAPFGELVGLSRQTRVIGLGRPLAVPVGSALLGRVLDGLGEPADGQGPL 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 GD ++I ++ P M R+ +E+ TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 123 A-GDDWVQIQAQAPDPMRRRLIEQPLPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLIG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIEMILGPDGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDRGMRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A +YP +D L S+S Sbjct: 302 MGET--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAARNQYPAIDVLGSLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + SA++++ L L+ + E + +G YR G D + D+A+ ++ I DFL Sbjct: 360 RVMSQIVSAEQRQYAGQLRRLLAKHNEVETLLQVGEYRHGSDAVADEAIARIDAIRDFLS 419 Query: 419 QSPSDLSSEDVFQE 432 Q LS D E Sbjct: 420 QPTDQLSDYDTILE 433 >gi|226225734|ref|YP_002759840.1| flagellum-specific ATP synthase [Gemmatimonas aurantiaca T-27] gi|226088925|dbj|BAH37370.1| flagellum-specific ATP synthase [Gemmatimonas aurantiaca T-27] Length = 457 Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 166/419 (39%), Positives = 250/419 (59%), Gaps = 16/419 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G ++ + + T + V LG V + ++ L +V+ N V + P+G + + Sbjct: 34 GRVTRVVGLVVEATGID--VGLGSLCRVTNHARDRSVLAEVVGFNERNVLLMPLGELDGL 91 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMN 137 G V GR F + GRV+N LG PIDG D++ + LS E P + Sbjct: 92 HAGASVQPLGRSFGVDVGPGLLGRVLNGLGHPIDGKGKLDTIERVSLSAE----PPNPLQ 147 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ +++ +TG+R ID + GQR+G+FAGSG+GKST+L M ARS D +I+L+GE Sbjct: 148 RETIDRPMETGVRAIDGLLTIGRGQRVGIFAGSGVGKSTMLGMVARSAKADVNVIALLGE 207 Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREVREF+E+ LG + L +SVV+VAT D++ ++R L A IAEYF +G VLL++ Sbjct: 208 RGREVREFLENSLGAEGLARSVVIVATGDQAALVRARGALVATAIAEYFRDQGKEVLLMV 267 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TR A + REI +GE P +GYP SVF+ LPRLLER G E+G IT + +VLVD Sbjct: 268 DSVTRVAMAWREIGLATGEPPTTKGYPPSVFANLPRLLERAG--NGERGGITGIYTVLVD 325 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 GD+ N+P+AD+ RSILDGHIVL R LA + +P +D L S SR+ D + +++ +++ Sbjct: 326 GDDFNEPVADAARSILDGHIVLTRRLAAQNHFPAIDVLDSKSRVKDHITNEAQRRSGAAM 385 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEIT 434 L + E D+ ++G Y+ G D +D A+ + +FL+Q P +++ D +Q + Sbjct: 386 LRLEAAYREKEDLIMVGAYQKGSDPYVDAAIAYRHRVLEFLQQRPDEITPYGDTYQALN 444 >gi|219670156|ref|YP_002460591.1| peptidase C14, ICE, catalytic subunit p20, active site [Desulfitobacterium hafniense DCB-2] gi|219540416|gb|ACL22155.1| Peptidase C14, ICE, catalytic subunit p20, active site [Desulfitobacterium hafniense DCB-2] Length = 433 Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 167/424 (39%), Positives = 253/424 (59%), Gaps = 12/424 (2%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76 +L+V G ++ I V + V +G++ +H + + +V+ + P+ Sbjct: 15 DLIVSHGRVAKI--VGLMIESDGPRVSVGEYCRIHTQQGKEIPAEVVGFRNSTTLLMPLA 72 Query: 77 IGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 E I+ GD +V + + GR+++ LG+P+DG + + D ++ + P A Sbjct: 73 ELEGIAPGDRVVPQQHKLEVGVGQALLGRILDGLGRPLDGRPMVTQRDYPLQ--NAPPSA 130 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 R R+ G+R +D + GQRIG+FAGSG+GKSTLL M AR+ +I+LV Sbjct: 131 FLRPRIRDPLSVGVRTVDGILTIGRGQRIGIFAGSGVGKSTLLGMMARNTTAGVNVIALV 190 Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGRE+R+FIE LG+ L++SV+VVATSD+ ++R A TA IAEYF +G +VLL Sbjct: 191 GERGRELRDFIEKDLGEEGLERSVLVVATSDQPALVRLKAAFTATAIAEYFRDQGQDVLL 250 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DS+TRFA + RE+ +GE P RGYP SVF+ LP+LLER G SE G+IT + +VL Sbjct: 251 MMDSVTRFAMAQREVGLTAGEPPATRGYPPSVFAMLPKLLERSGMSEI--GSITGIYTVL 308 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 VDGD+HN+PIAD+VR ILDGHIVL R LA + YP +D L SVSR+ + + + K+L Sbjct: 309 VDGDDHNEPIADTVRGILDGHIVLTRELAMQNHYPAIDTLQSVSRVMNDIIAPEHKELAG 368 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434 L + + + +D+ IG Y G + +D A+ + I FL+Q D+ + F ++ Sbjct: 369 KLREHLAVYHDAKDLIDIGAYVTGSNPRIDAAIRHIEGINGFLRQ---DVEEKVSFDQML 425 Query: 435 KKLQ 438 ++LQ Sbjct: 426 RQLQ 429 >gi|197104319|ref|YP_002129696.1| flagellum-specific ATP synthase FliI [Phenylobacterium zucineum HLK1] gi|196477739|gb|ACG77267.1| flagellum-specific ATP synthase FliI [Phenylobacterium zucineum HLK1] Length = 449 Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 152/343 (44%), Positives = 216/343 (62%), Gaps = 7/343 (2%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+ W GR ++A G PIDG L +G S + + P A R RV + G+R +++ Sbjct: 91 VRPTRAWLGRTVDAFGNPIDGKGPLPQGLASYPLRAPPPAAHARARVGERLDLGVRAMNV 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 FT C GQR+GVFAGSG+GKS LLSM A++ D V++ L+GERGREVREFIE+ LG + Sbjct: 151 FTTCCRGQRLGVFAGSGVGKSVLLSMLAKNADCDAVVVGLIGERGREVREFIEETLGEEG 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 LK+++VVVATSDE + R+ A + IAE+ + VL ++DS+TRFA + REI + Sbjct: 211 LKRAIVVVATSDEPALKRRQAAYMTMAIAEFLRDQDLEVLCLMDSVTRFAMAQREIGLAA 270 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSE-----KEKGNITAVISVLVDGDNHNDPIADSV 328 GE P +GY +VF+ELP+LLER GP G IT + +VLVDGD+HN+PIAD+V Sbjct: 271 GEPPTTKGYTPTVFTELPKLLERAGPGPIRPDGTRAGPITGLFTVLVDGDDHNEPIADAV 330 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R ILDGHIV+ R++AE GR+P ++ L S+SR E+++V + + + Sbjct: 331 RGILDGHIVMERAIAERGRFPAINVLKSISRTMPGCQQPHEREVVKQARQALSAYANMEE 390 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVF 430 + IG YR G D ++D+A+ P + FL Q P D + E+ F Sbjct: 391 LIRIGAYRAGADPLIDRAIELNPSLEAFLSQDPDDATGLEESF 433 >gi|306820116|ref|ZP_07453764.1| flagellar protein export ATPase FliI [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551894|gb|EFM39837.1| flagellar protein export ATPase FliI [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 439 Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 165/367 (44%), Positives = 233/367 (63%), Gaps = 5/367 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 + +V+ + V + P+G + IS G V G + GRV++ LG+PID + Sbjct: 58 MAEVVGFTENAVLLMPLGDMQGISPGATVIASGNSHEVQVGDSLLGRVLDGLGQPIDDKE 117 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 SL + + + P ++R R+ + G++VID GQRIG+FAGSG+GKSTL Sbjct: 118 SLNVSR-AYPVNNMPPNPLSRMRIREPLPLGVKVIDGMLTCGRGQRIGIFAGSGVGKSTL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M AR+ D +I L+GERGREV+EFIE+ L + L +SVVVVATSD+ ++RK L Sbjct: 177 LGMIARNTVADINVIGLIGERGREVKEFIENDLKEEGLSRSVVVVATSDQPALVRKKGAL 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +IAEYF +G NV+L++DS+TRF+ + RE+ GE PV +GYP SVF+ELPRLLER Sbjct: 237 LATSIAEYFRDQGKNVILMMDSLTRFSMAQREVGLAIGEPPVTKGYPPSVFAELPRLLER 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S+K G+ITA+ +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA + YP +D LAS Sbjct: 297 SGNSDK--GSITALYTVLVDGDDMNEPIADTVRGILDGHIVLSRALANKNHYPAIDVLAS 354 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ S + K V + L+ ++++ D+ IG Y G +D A+ + I +F Sbjct: 355 VSRVMPSIISGEHMKKVGVMRDLLATYKDSEDLISIGAYVKGSSKKVDFAIEKNDEINNF 414 Query: 417 LKQSPSD 423 LKQ D Sbjct: 415 LKQGVHD 421 >gi|315186386|gb|EFU20146.1| type III secretion system ATPase, FliI/YscN [Spirochaeta thermophila DSM 6578] Length = 448 Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 164/361 (45%), Positives = 226/361 (62%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +VI + VY+ E I +GD++ G I S GRV++A G PID L Sbjct: 57 EVIGLKGSTVYLMGYQDPEGIQVGDVIEAMGEPLSIRVSEGLLGRVLDARGMPIDDKGPL 116 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G + + P + R+R+E+ TGIR +D P+ GQR+GVF+GSG+GKSTLL Sbjct: 117 PPG-IRYPVQGGPPHVLKRRRIEEQIATGIRALDGLLPIGKGQRVGVFSGSGVGKSTLLG 175 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238 M AR+ D +I+L+GERGREV EFIE LG+ LK+SVVVV+TSD + R A Sbjct: 176 MVARNTNADVNVIALIGERGREVAEFIEHDLGEEGLKRSVVVVSTSDTPAVARYRGAFVA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 V IAEYF +G +V+L+ DS+TRFA ++REI GE P RGYP SVFS LP+LLER G Sbjct: 236 VAIAEYFRDQGKDVMLLFDSVTRFARALREIGLALGESPATRGYPPSVFSTLPKLLERCG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 S EKG IT SVLV+GD+ ++P++D+VR ILDGH+VL+R LA+ YP +D L+SVS Sbjct: 296 TS--EKGTITGFFSVLVEGDDMDEPVSDAVRGILDGHVVLSRRLAQRQHYPAIDVLSSVS 353 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA K + ++ + + ++ET D+ +G Y G + +DKA+ ++P I FL+ Sbjct: 354 RLAPKITTPPVREAARRVLRWLAAYQETEDLINVGAYARGSNPEVDKAIEKLPDINAFLR 413 Query: 419 Q 419 Q Sbjct: 414 Q 414 >gi|294665982|ref|ZP_06731245.1| type III secretion system ATPase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292604230|gb|EFF47618.1| type III secretion system ATPase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 442 Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 161/370 (43%), Positives = 225/370 (60%), Gaps = 5/370 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + I ++ P M R+ +E+ TG+R++D T L GQR+G+FA +G+GKSTL+ Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLTTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S Sbjct: 302 MGEN--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + +D + L L+ ++ E + +G YR G D + D+A+ ++ I DFL Sbjct: 360 RVMSQIVPSDHSQAAGQLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419 Query: 419 QSPSDLSSED 428 Q LS+ D Sbjct: 420 QPTDQLSAYD 429 >gi|227876742|ref|ZP_03994851.1| H(+)-transporting two-sector ATPase [Mobiluncus mulieris ATCC 35243] gi|269976269|ref|ZP_06183265.1| flagellum-specific ATP synthase [Mobiluncus mulieris 28-1] gi|306817689|ref|ZP_07451431.1| flagellar protein export ATPase FliI [Mobiluncus mulieris ATCC 35239] gi|307699792|ref|ZP_07636843.1| ATPase FliI/YscN family protein [Mobiluncus mulieris FB024-16] gi|227842639|gb|EEJ52839.1| H(+)-transporting two-sector ATPase [Mobiluncus mulieris ATCC 35243] gi|269935598|gb|EEZ92136.1| flagellum-specific ATP synthase [Mobiluncus mulieris 28-1] gi|304649503|gb|EFM46786.1| flagellar protein export ATPase FliI [Mobiluncus mulieris ATCC 35239] gi|307614830|gb|EFN94048.1| ATPase FliI/YscN family protein [Mobiluncus mulieris FB024-16] Length = 441 Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 170/413 (41%), Positives = 245/413 (59%), Gaps = 9/413 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G + S+ + V L C VV G + +V+ ++ + P+ + + + Sbjct: 22 GEVESVVGLSVQVRGLD---CRVGEVVLVGDGTGTPAEVVALDAGLASCMPLDNLDGLRV 78 Query: 84 GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G V G P GRVI+A G+PIDG + D + I P A+ R R++ Sbjct: 79 GSPVRGTGLPATVPVGPALLGRVIDAAGRPIDGKGPIYVAD-HVPIHGSAPNALERARID 137 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 G+RV+D L GQRIG+FAGSG+GKSTL+SM AR + +I+LVGERGREV Sbjct: 138 TPVAMGVRVLDTLVTLGRGQRIGLFAGSGVGKSTLMSMIARGTNAEVCVIALVGERGREV 197 Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 REF+ED LG+ L +SVVVVATSDESP+LRK A TA +AEY+ G +VLL++DS+TR Sbjct: 198 REFLEDDLGEEGLSRSVVVVATSDESPMLRKRAAFTATRVAEYYRDAGRHVLLMMDSLTR 257 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 + REI + GE P RGYP S FS + +LLER G G++T + +VLVDGD+HN Sbjct: 258 TCMAQREIGLSVGEPPATRGYPPSTFSMMAQLLERAGSGAV--GSVTGIYTVLVDGDDHN 315 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD RSILDGH+VL+R LA G YP VD LAS+SR+A K + ++K+ ++L ++ Sbjct: 316 EPIADQARSILDGHVVLDRKLAVAGHYPAVDALASISRVASKVCTREQKEAATALRQVMG 375 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433 +D+ +G Y+ G + +D A+ I FL Q + ++ ++ +Q++ Sbjct: 376 AKRGVQDLLDVGAYQQGTNPEVDLALQYDEEIEAFLTQKTDEKITFDEAWQQL 428 >gi|159024047|gb|ABW87275.1| HrcN [Xanthomonas fuscans subsp. fuscans] Length = 442 Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 161/370 (43%), Positives = 225/370 (60%), Gaps = 5/370 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + I ++ P M R+ +E+ TG+R++D T L GQR+G+FA +G+GKSTL+ Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLTTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S Sbjct: 302 MGEN--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + +D + L L+ ++ E + +G YR G D + D+A+ ++ I DFL Sbjct: 360 RVMSQIVPSDHSQAARQLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419 Query: 419 QSPSDLSSED 428 Q LS+ D Sbjct: 420 QPTDQLSAYD 429 >gi|158320515|ref|YP_001513022.1| flagellar protein export ATPase FliI [Alkaliphilus oremlandii OhILAs] gi|158140714|gb|ABW19026.1| flagellar protein export ATPase FliI [Alkaliphilus oremlandii OhILAs] Length = 437 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 170/425 (40%), Positives = 258/425 (60%), Gaps = 10/425 (2%) Query: 7 TLAQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDN-LGQVI 63 +L + E SK +L+ GY+S + + T+ + V LG+ ++ K ++ L +V+ Sbjct: 5 SLKKYEEALSKLDLIKYTGYVSQVIGL--TIESVGPAVKLGEMCKIYSLKGTEPILSEVV 62 Query: 64 RINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKG 122 V + P+G E I G V G ++S GRV++ LG PID D L Sbjct: 63 GFKEKKVLLMPLGEMEGIGPGSKVEALGITMQVSVGEELLGRVLDGLGNPID-DKELLNT 121 Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 + + +M+ P + R ++ + G++ +D +GQRIG+FAGSG+GKSTLL M A Sbjct: 122 NKTYPVMAAPPNPLKRTKINEPLALGVKTLDGLLTCGNGQRIGIFAGSGVGKSTLLGMIA 181 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241 R+ D +I+L+GERGREVREFIE+ L + LK+SVV+VATSD+ ++RK L A + Sbjct: 182 RNTQADINVIALIGERGREVREFIENDLQEEGLKRSVVIVATSDQPALIRKKGALLATAV 241 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AEYF +G NV+L++DS+TRF+ + RE+ GE PV+RGY SVF+ELP+LLER G S Sbjct: 242 AEYFRDQGKNVILMMDSLTRFSMAQREVGLAVGEPPVSRGYTPSVFAELPKLLERSGTS- 300 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 +KG+IT + +VLVDGD+ N+PIAD+VR ILDGHIVL+R +A YP +D LASVSR+ Sbjct: 301 -DKGSITGLYTVLVDGDDMNEPIADTVRGILDGHIVLSRKIANRNHYPAIDVLASVSRVM 359 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421 + + + L+ + + D+ IG Y G + +D++++++ I FL+Q Sbjct: 360 PNIVEKKHLLIANEIKELLSTYNSSEDLINIGAYIKGTNRRIDESINKIDSINSFLRQDV 419 Query: 422 SDLSS 426 D ++ Sbjct: 420 HDKTT 424 >gi|170742092|ref|YP_001770747.1| flagellum-specific ATP synthase [Methylobacterium sp. 4-46] gi|168196366|gb|ACA18313.1| flagellar protein export ATPase FliI [Methylobacterium sp. 4-46] Length = 451 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 153/333 (45%), Positives = 215/333 (64%), Gaps = 2/333 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 I PS W GRV++ALG+P+DG L G L + + PPA R RV G+R I+ Sbjct: 105 IRPSPAWLGRVVDALGRPVDGRGPLPPGPLPYPLRADPPPAHARARVGPPLDLGVRCINT 164 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 F +C GQR+G+FAGSG+GKS LLSM AR+ D +I LVGERGREV+EF++D LG + Sbjct: 165 FLTMCVGQRMGIFAGSGVGKSVLLSMLARAAACDVAVIGLVGERGREVQEFLQDDLGPEG 224 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L +SVVVVATSDE ++R+ A + +AE F G VL ++DS+TRFA + R++ + Sbjct: 225 LARSVVVVATSDEPALMRRNAAYVTLALAESFRDAGAQVLCMIDSVTRFAMAQRDVGLAA 284 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P A+GY +VFSELPRLLER GP G+I+ + +VLV+GD+HN+P+AD+VR ILD Sbjct: 285 GEPPTAKGYTPTVFSELPRLLERAGPGTG-AGSISGLFTVLVEGDDHNEPVADAVRGILD 343 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIV+ R +AE GRYP ++ L SVSR +A V L+ + + ++ +G Sbjct: 344 GHIVMERRIAEGGRYPAINVLRSVSRTMPRACDPAFLPTVQRARWLLSTYADMEELIRLG 403 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 YRPG +D+A+ +P + F++Q + +S Sbjct: 404 AYRPGSSPDVDEAIGLMPDLEAFMRQGKEEATS 436 >gi|307718601|ref|YP_003874133.1| hypothetical protein STHERM_c09130 [Spirochaeta thermophila DSM 6192] gi|306532326|gb|ADN01860.1| hypothetical protein STHERM_c09130 [Spirochaeta thermophila DSM 6192] Length = 448 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 164/361 (45%), Positives = 225/361 (62%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +VI + VY+ E I +GD++ G I S GRV++A G PID L Sbjct: 57 EVIGLKGSTVYLMGYRDPEGIQVGDVIEAMGEPLSIRVSEGLLGRVLDARGMPIDDKGPL 116 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G + + P + R+R+E+ TGIR +D P+ GQR+GVF+GSG+GKSTLL Sbjct: 117 PPG-IRYPVQGGPPHVLKRRRIEEQIATGIRALDGLLPIGKGQRVGVFSGSGVGKSTLLG 175 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238 M AR+ D +I+L+GERGREV EFIE LG+ LK+SVVVV+TSD + R A Sbjct: 176 MVARNTNADVNVIALIGERGREVAEFIEHDLGEEGLKRSVVVVSTSDTPAVARYRGAFVA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 V IAEYF +G +V+L+ DSITRFA ++RE+ GE P RGYP SVFS LP+LLER G Sbjct: 236 VAIAEYFRDQGKDVMLLFDSITRFARALREMGLALGESPATRGYPPSVFSTLPKLLERCG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 S EKG IT SVLV+GD+ ++P++D+VR ILDGH+VL+R LA+ YP +D L+SVS Sbjct: 296 TS--EKGTITGFFSVLVEGDDMDEPVSDAVRGILDGHVVLSRRLAQRQHYPAIDVLSSVS 353 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA K + + + + ++ET D+ +G Y G + +DKA+ ++P I FL+ Sbjct: 354 RLAPKITTPPVRDAARRVMRWLAAYQETEDLINVGAYARGSNPEVDKAIEKLPDINAFLR 413 Query: 419 Q 419 Q Sbjct: 414 Q 414 >gi|85706173|ref|ZP_01037268.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius sp. 217] gi|85669337|gb|EAQ24203.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius sp. 217] Length = 444 Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 158/397 (39%), Positives = 241/397 (60%), Gaps = 5/397 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82 G +S++ ++ LS LGD VV Q ++ L G+VIR+ + + P + ++ Sbjct: 18 GRVSAVQGSSLQISGLSAEARLGDRVVIQRRSDGALHGEVIRLEAASLVVLPDTSPDGVA 77 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-V 141 LGD V ++PS W GR+I+ G+P+DG L ++ + PPA R+R + Sbjct: 78 LGDRVILGQENSVAPSHSWLGRIIDPFGEPLDGRPLLRGANI--RALRADPPAPTRRRTL 135 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 +TG+ + P+ GQR+G+FAGSG+GKS LL AR D V+I+L+GERGRE Sbjct: 136 GARLETGMVAFNTVLPIVRGQRVGLFAGSGVGKSMLLGHLARHMQADVVVIALIGERGRE 195 Query: 202 VREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +REF+E LG + +++SV+V ATSD SP++R+ TA+ +AE+F +G VL + DSIT Sbjct: 196 LREFVETVLGPEGMRRSVIVAATSDRSPLIRRRCAWTAMAVAEFFRDEGKQVLFLADSIT 255 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RFA + RE+AT +GE+P RG+P+S + L ER GP + G+ITA+++VLV G + Sbjct: 256 RFAEAHREVATAAGEMPALRGFPSSTAHLIMSLCERAGPGAESMGDITALLTVLVAGSDM 315 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 ++PIAD +R +LDGH++L+R +AE GRYP +D L SVSR +A S +E L++ L+ Sbjct: 316 DEPIADILRGVLDGHVILDRQIAERGRYPAIDLLRSVSRSLPRAASDEENALIARARALL 375 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 + + + G Y G D LD+A+ P + FL Sbjct: 376 SSYSRSETMIRAGLYAEGSDPELDQAIRIWPDLDGFL 412 >gi|149203131|ref|ZP_01880102.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius sp. TM1035] gi|149143677|gb|EDM31713.1| H+-transporting two-sector ATPase, flagellum-specific [Roseovarius sp. TM1035] Length = 444 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 159/412 (38%), Positives = 246/412 (59%), Gaps = 4/412 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82 G +S++ ++ LS LGD V + ++ L G+VIR+ V + P E ++ Sbjct: 18 GRVSAVQGNTLRISGLSSEARLGDRVDIRRRSGAPLSGEVIRLEAASVMVLPESSPEGVA 77 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 LGD V I+PS W GR+I+ G P+DG L +G + + ++ P R+ + Sbjct: 78 LGDRVILGQAEAIAPSHGWLGRIIDPFGAPLDGRPLL-RGAETRALRAEPPAPARRRALG 136 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 +TG+ + P+ GQR+G+FAGSG+GK+ LL AR D V+I+L+GERGRE+ Sbjct: 137 ARLETGMAAFNTVLPIVRGQRVGLFAGSGVGKTMLLGHLARHMQADVVVIALIGERGREL 196 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 REF+E LG + ++++V+V ATSD SP++R+ TA+ +AE+F +G VL + DSITR Sbjct: 197 REFVEHVLGPEGMRRAVIVAATSDRSPLVRRRCAWTAMAVAEFFRDQGQQVLFLADSITR 256 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + RE+AT +GE+P RG+P S + L ER GP E G+ITA+++VLV G + Sbjct: 257 FAEAHREVATAAGEMPALRGFPASTSHLIMSLCERAGPGEDGAGDITALLTVLVAGSDME 316 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD +R +LDGH+VL+R +AE GRYP +D L SVSR +A + +E L+S L+ Sbjct: 317 EPIADILRGVLDGHVVLDRQIAERGRYPAIDLLRSVSRSLPRAATDEENTLISRTRSLLG 376 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 + + + G Y G D LD+A+ P + FL + + +S+++ F + Sbjct: 377 NYARSETMIKAGLYAEGSDPELDQAIRIWPELDGFLAEKEA-VSAKNSFARL 427 >gi|217077671|ref|YP_002335389.1| flagellar protein export ATPase FliI [Thermosipho africanus TCF52B] gi|217037526|gb|ACJ76048.1| flagellar protein export ATPase FliI [Thermosipho africanus TCF52B] Length = 434 Score = 290 bits (741), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 165/377 (43%), Positives = 238/377 (63%), Gaps = 7/377 (1%) Query: 58 NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116 L +V+ N + + + P+ + G V G + P S G+VI++LG+P+DG Sbjct: 53 TLAEVVGFNDNGIILMPLEDISGLKKGCQVLKTGEYVSVPVSEELLGKVIDSLGRPLDGK 112 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 K + I+ + P + R+R+ G+R ID F L +GQRIG+FAGSG+GKST Sbjct: 113 KIYTKE--KVPIVREAPNPLVRKRITTPISVGVRAIDGFLTLGYGQRIGIFAGSGVGKST 170 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAP 235 LL M AR+ D +ISL+GERGREVREFIE D + LK+SVVVV+TSD+ +LR A Sbjct: 171 LLGMVARNTSADINVISLIGERGREVREFIEKDLKKEGLKRSVVVVSTSDQPALLRVKAL 230 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LTA +IAEYF KG NVLL++DS+TR+A + RE+ +GE P RGYP SVF+ LP++LE Sbjct: 231 LTATSIAEYFRDKGYNVLLMVDSLTRWAIAQREVGLATGEPPTTRGYPPSVFAGLPKILE 290 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S +KG+IT + +VLV+ D+ N+PI+D+VR I+DGHI+L+R LAE YP +D L Sbjct: 291 RAGNS--DKGSITGIYTVLVESDDFNEPISDTVRGIVDGHIILSRKLAESAHYPAIDILM 348 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 SVSRL + + K + L+ + + +D+ +G Y+ G + +DKA+ + I Sbjct: 349 SVSRLMNDITRKEHKIAALKIKDLLATYYDAKDLIDVGAYKKGTNPKIDKAIELIDEINK 408 Query: 416 FLKQSPSD-LSSEDVFQ 431 FL+QS + +S ED + Sbjct: 409 FLRQSVDEKMSFEDTVE 425 >gi|258592502|emb|CBE68811.1| flagellum-specific ATP synthase [NC10 bacterium 'Dutch sediment'] Length = 479 Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 172/411 (41%), Positives = 240/411 (58%), Gaps = 7/411 (1%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76 NL+ G ++ + V + + Q +G+ + D +V+ + +I+ + P+G Sbjct: 19 NLIRSLGKVTKV--VGLVIEAVGQEAFIGELCRIRSAGRHDVWAEVVGFHGEILLLMPLG 76 Query: 77 IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 I G V GR F + GRV+N LG+PIDG + + + + + P Sbjct: 77 EIHGIRPGSEVVAAGRPFEVPVGRSMLGRVVNGLGRPIDGKAPV-EVEARCSVHRQPPSP 135 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 M R + + TGIRVID GQR+G+FAGSG+GKSTLL M AR D +I+LV Sbjct: 136 MTRAPIIEPLATGIRVIDGLLTCGKGQRVGIFAGSGVGKSTLLGMIARYTEADVNVIALV 195 Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREVREFI LG D L++SVVVVATS+E +LR+ A A IAEYF +G +VLL Sbjct: 196 GERGREVREFITKELGEDGLRRSVVVVATSNEPSLLRRQAAYVATAIAEYFRDQGKHVLL 255 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DS+TRFA + REI + GE P RGYP S F+ LP LLER G ++ G+IT + ++L Sbjct: 256 MMDSLTRFALAQREIGLSVGEPPTTRGYPPSAFAMLPGLLERAGTAD-HGGSITGLYTIL 314 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V+GD+ N+P+AD R+ILDGHIVL R LAE YPPVD L SVSRL + + S Sbjct: 315 VEGDDMNEPVADHARAILDGHIVLTRELAERNHYPPVDFLGSVSRLMSVVAPREVRAAAS 374 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 L L+ + +D+ IG Y G + +D+A+ + I FL+QS + S Sbjct: 375 KLRELLAAHRQAQDLINIGAYVSGSNPKVDEALRYMTPIEAFLRQSSDERS 425 >gi|146296283|ref|YP_001180054.1| flagellar protein export ATPase FliI [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409859|gb|ABP66863.1| type III secretion system ATPase, FliI/YscN [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 431 Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 162/411 (39%), Positives = 250/411 (60%), Gaps = 17/411 (4%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP- 74 S N G+++ + + T+ + V +G + S+ L +V+ + V + P Sbjct: 11 STNFYQFTGFVNQVIGL--TIESIGPAVSIGTLCKIKTAKSETLAEVVGFKENKVLLMPY 68 Query: 75 ---VGI--GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129 VGI G ++ D +F + GR+++ LG+PIDG + K + + Sbjct: 69 SDLVGIFPGCKVIAQDSIFE-----VKVGEELLGRILDGLGQPIDGKGEI-KSKIKYPVE 122 Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189 ++ P + R R++ GI+ ID + GQR+G+FAGSG+GKSTLL M AR+ D Sbjct: 123 NRAPNPLERPRIDSVMPLGIKAIDALITIGKGQRVGIFAGSGVGKSTLLGMIARNAKADV 182 Query: 190 VIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248 +++L+GERGRE++EF+E D + LK+SVV+VATSDES + R A A+ IAEYF + Sbjct: 183 NVLALIGERGRELKEFLEKDLKEEGLKRSVVIVATSDESALKRVKAAYVAMAIAEYFRDQ 242 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 G +VL ++DS+TRFA + REI GE PV+RGY SVFS +P+LLER G + +KG+IT Sbjct: 243 GMDVLFMMDSLTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAG--KNQKGSIT 300 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 A+ +VLVDGD+ N+PI D+ R ILDGHIVL+RS+A + YP +D LAS+SR+ + S + Sbjct: 301 ALYTVLVDGDDFNEPITDTARGILDGHIVLSRSIANKNHYPAIDVLASISRVMNDIVSPE 360 Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 K++ + ++ ++E D+ IG Y G + +D+A+ +P I +FL+Q Sbjct: 361 HKEVANETKRILATYKEAEDLITIGAYTKGTNSEIDRAIDLMPRINEFLRQ 411 >gi|119384841|ref|YP_915897.1| FliI/YscN family ATPase [Paracoccus denitrificans PD1222] gi|119374608|gb|ABL70201.1| ATPase, FliI/YscN family [Paracoccus denitrificans PD1222] Length = 444 Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 167/405 (41%), Positives = 243/405 (60%), Gaps = 9/405 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82 G +S+I + L+ + LGD VV ++ L G+++ ++ D I P G + +S Sbjct: 18 GQVSAIQAGVILAGGLNSHASLGDRVVFSMRSGQVLNGEIVALHSDQAVILPEGPMDGLS 77 Query: 83 LG---DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 + +LVF ++P+ W GR+I+ G+P+DG + G+ PPA +R Sbjct: 78 ISTRVELVFAP---MLAPANAWIGRIIDPFGRPLDGRPLVAGGE-ERGFRPPPPPAASRN 133 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ TG+ V D PL GQR+G+FAGSG+GKSTLLSM A+ D V+I+LVGERG Sbjct: 134 RLGGRLDTGLAVFDTLLPLVRGQRMGLFAGSGVGKSTLLSMLAKGVPADVVVIALVGERG 193 Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 RE+REF+E+ LG+ + +SVVV ATSD+ P++R+ A+T+AE+F +G +VL + DS Sbjct: 194 RELREFVEETLGEEGMARSVVVAATSDQPPLMRRRCAWAAMTVAEHFRDQGRHVLFLADS 253 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 ITRFA + REIA +GE P RG+P S + L ER GP G+ITA+ SVLV G Sbjct: 254 ITRFAEAHREIALAAGESPSYRGFPPSTSHLIMSLAERSGPGPAGAGDITAIFSVLVAGS 313 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + +P+AD +R +LDGH+VL+R++AE GR+P VD L SVSR +A SADE L++ Sbjct: 314 DMEEPVADILRGVLDGHVVLDRAIAERGRFPAVDVLRSVSRSLPQAASADENALIARARA 373 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 + + E+ + G Y PG D LD+AV P + F + D Sbjct: 374 TLGTYAESELMIRAGLYAPGSDPALDEAVRLYPALDAFFTRRGGD 418 >gi|24251287|gb|AAN46406.1| HrpB6 [Xanthomonas oryzae pv. oryzae] Length = 442 Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 160/367 (43%), Positives = 223/367 (60%), Gaps = 5/367 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P A GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELIGLSRETRVIGLGRPLAVPVGAALLGRVLDGLGEPSDGQGAI 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + I ++ P M R+ +E TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + +D + L L+ ++ E + +G YR G D + D+A++++ I DFL Sbjct: 360 RVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAINRIDAIRDFLS 419 Query: 419 QSPSDLS 425 Q LS Sbjct: 420 QPTDQLS 426 >gi|260431754|ref|ZP_05785725.1| flagellum-specific ATP synthase [Silicibacter lacuscaerulensis ITI-1157] gi|260415582|gb|EEX08841.1| flagellum-specific ATP synthase [Silicibacter lacuscaerulensis ITI-1157] Length = 445 Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 154/391 (39%), Positives = 240/391 (61%), Gaps = 3/391 (0%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICPVGIG 78 V Q G +S + + L+ +GD + + + D G+V+ + D+V++ P Sbjct: 19 VRQMGVVSGVARGMIEIDGLATVARIGDHLTLRRPQGPDLAGEVLNVESDVVHMLPSAAP 78 Query: 79 EEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138 + + LGD V+ +P W GRV++ G P+DG L G ++++ P A++R Sbjct: 79 DGVRLGDRVYLEPTPAFAPGMHWLGRVVDPFGTPLDGKPLL-PGMHERDVLAAPPRAVDR 137 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198 + + + TG+ +++ P+ GQR+G+FAGSG+GKSTLL+ A+S D V+++L+GER Sbjct: 138 KPLGERMATGLAIMNTVLPIVRGQRVGLFAGSGVGKSTLLATLAKSMEADAVVVALIGER 197 Query: 199 GREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257 GREV EF+E+ LG + LK+S+VV ATSD+S + R+ +A+T AEY +G +VL + D Sbjct: 198 GREVNEFVENALGREGLKRSIVVAATSDQSALARRRCAWSAMTAAEYLRDQGLSVLFLAD 257 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 S+TRFA + REIA GE P RG+P SV + L ER GP + +G+ITAV SVLV G Sbjct: 258 SVTRFAEAHREIAVAMGESPSLRGFPPSVTPMIAGLCERAGPGTENQGDITAVFSVLVAG 317 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 + ++PIAD +R +LDGHIVL+R +AE GR+P +D SVSR A + +E +L++ Sbjct: 318 SDMDEPIADILRGVLDGHIVLSREIAERGRFPAIDVSRSVSRSLPDAATPEENQLIAETR 377 Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 L+ +E++ + G Y PG D +LD+A+ Sbjct: 378 RLVGSYEQSEVMIKAGLYTPGTDPLLDQAMR 408 >gi|323705443|ref|ZP_08117018.1| ATPase, FliI/YscN family [Thermoanaerobacterium xylanolyticum LX-11] gi|323535345|gb|EGB25121.1| ATPase, FliI/YscN family [Thermoanaerobacterium xylanolyticum LX-11] Length = 438 Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 171/410 (41%), Positives = 253/410 (61%), Gaps = 8/410 (1%) Query: 17 KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPV 75 KN + G +S + V T+ + +GD + N + +V+ D VY+ P+ Sbjct: 17 KNFIKYYGKVSQV--VGLTIESVGPISNIGDVCEIRSINGTTVYAEVMGFKDDKVYLMPL 74 Query: 76 GIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134 G + I G+ V G + +I GRVI+ALG PIDG ++ L + + P Sbjct: 75 GDMDGIGPGNSVVSTGQKLKIGVGKELLGRVIDALGNPIDGKGAIKCKKL-VSTNNTPPN 133 Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194 + R+R+ + GI+ ID GQRIG+FAGSG+GKSTLL M AR+ D +I+L Sbjct: 134 PIERKRISEVMTLGIKAIDGLLTCGKGQRIGIFAGSGVGKSTLLGMIARNAKSDINVIAL 193 Query: 195 VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253 +GERGREV EFIE LG D LK+S++VV+TSD ++R + A +IAEYF +G +VL Sbjct: 194 IGERGREVNEFIEKDLGEDGLKRSILVVSTSDTPALMRVKGAMAATSIAEYFRDQGLDVL 253 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 L++DS+TRFA + REI + GE PV+RGY SVFS LP+LLER G S+ G+ITA+ +V Sbjct: 254 LMMDSVTRFAMAQREIGLSIGEAPVSRGYTPSVFSVLPKLLERAGSSKH--GSITALYTV 311 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373 LVDGD+ N+PI D+VR ILDGHIVL+R LA +G+YP +D L+S+SR+ + + + K L Sbjct: 312 LVDGDDLNEPITDAVRGILDGHIVLSRKLANKGQYPAIDVLSSISRVMNDIVTDEHKNLS 371 Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 +++ +EE+ D+ IG Y G + +D+A+ + +++KQS ++ Sbjct: 372 LRFKNILSVYEESEDLINIGAYAKGSNPKIDEAILLHDDMINYIKQSTNE 421 >gi|315654581|ref|ZP_07907487.1| flagellar protein export ATPase FliI [Mobiluncus curtisii ATCC 51333] gi|315657514|ref|ZP_07910396.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491045|gb|EFU80664.1| flagellar protein export ATPase FliI [Mobiluncus curtisii ATCC 51333] gi|315491986|gb|EFU81595.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 444 Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 167/398 (41%), Positives = 235/398 (59%), Gaps = 8/398 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G + S+ + V L C VV G + +V+ ++ I P+ + + + Sbjct: 25 GEVESVVGLSVRVRGLQ---CSVGEVVLVGDDPGVPAEVVALDAGIASCMPLDNLDGLRV 81 Query: 84 GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G V G P GRVI+A G+P+DG + D + I P A+ R R++ Sbjct: 82 GSPVRGTGLPATVPVGPALLGRVIDAAGRPLDGKGPIYAAD-RVPIHGAAPNALERARID 140 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 G+RV+D L GQRIG+FAGSG+GKSTL+SM AR + +I+LVGERGREV Sbjct: 141 MPVAMGVRVLDTLVTLGRGQRIGLFAGSGVGKSTLMSMIARGTNAEVCVIALVGERGREV 200 Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 REF+ED LG+ L +SVVVVATSDESP+LRK A TA +AEY+ G +VLL++DS+TR Sbjct: 201 REFLEDDLGEEGLSRSVVVVATSDESPMLRKRAAFTATRVAEYYRDAGRHVLLMMDSLTR 260 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 + REI + GE P RGYP S FS + +LLER G G++T + +VLVDGD+HN Sbjct: 261 TCMAQREIGLSVGEPPATRGYPPSTFSMMAQLLERAG--SGAIGSVTGIYTVLVDGDDHN 318 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD RSILDGH+VL+R LA G YP +D L S+SR+A K + ++++ ++L ++ Sbjct: 319 EPIADQARSILDGHVVLDRKLAVAGHYPAIDALGSISRVASKVTTREQREAATALRQIMG 378 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +D+ +G Y+ G + +D AV I FL Q Sbjct: 379 AKRSVQDLLDVGAYQAGTNPEVDTAVKYDAEIEAFLTQ 416 >gi|58579714|ref|YP_198730.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzae KACC10331] gi|84621742|ref|YP_449114.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188574355|ref|YP_001911284.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzae PXO99A] gi|7350913|gb|AAF61281.1| HrpB6 [Xanthomonas oryzae pv. oryzae] gi|9711583|dbj|BAB07852.1| HrpB6 [Xanthomonas oryzae pv. oryzae] gi|50428346|dbj|BAD29983.1| HrcN [Xanthomonas oryzae pv. oryzae] gi|58424308|gb|AAW73345.1| HrcN protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84365682|dbj|BAE66840.1| HrcN protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188518807|gb|ACD56752.1| type III secretion apparatus H+-transporting two-sector ATPase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 442 Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 160/367 (43%), Positives = 223/367 (60%), Gaps = 5/367 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P A GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELIGLSRETRVIGLGRPLAVPVGAALLGRVLDGLGEPSDGQGAI 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + I ++ P M R+ +E TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + +D + L L+ ++ E + +G YR G D + D+A++++ I DFL Sbjct: 360 RVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAINRIDAIRDFLS 419 Query: 419 QSPSDLS 425 Q LS Sbjct: 420 QPTDQLS 426 >gi|327441052|dbj|BAK17417.1| flagellar biosynthesis/type III secretory pathway ATPase [Solibacillus silvestris StLB046] Length = 441 Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 166/374 (44%), Positives = 234/374 (62%), Gaps = 9/374 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDG 115 L +V+ +IV + P +EIS+G LV G ++ P G+V++A+G P DG Sbjct: 58 LAEVVGFKDEIVILMPYSSLKEISIGCLVEGTGSPLEVKVGPE--LIGKVLDAMGNPFDG 115 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 L KG +++ + P ++R + + + G++ ID + GQR+G+FAGSG+GKS Sbjct: 116 Q-PLPKGLMTVPTEKEPPNPLSRPPINEQLEVGVKAIDGMLTVGSGQRVGIFAGSGVGKS 174 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234 TLL M AR+ D +I+LVGERGREVREFIE LG + L++SVVV ATSD+ ++R A Sbjct: 175 TLLGMIARNTEADINVIALVGERGREVREFIERDLGPEGLQRSVVVAATSDQPALMRIKA 234 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA IAEYF +G NV+L++DS+TR A + REI GE P RGY SVF+ LP LL Sbjct: 235 AFTATAIAEYFRDRGKNVMLMMDSVTRVAMAQREIGLAIGEPPATRGYTPSVFAILPTLL 294 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + G ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G+YP ++ L Sbjct: 295 ERSGTNIN--GTITAFYTVLVDGDDMNEPIADAVRGILDGHIVLDRNLANKGQYPAINIL 352 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 SVSRL + + + S L L + + ++ D+ IG Y+ G +D+A+ P+I Sbjct: 353 KSVSRLMNHIAQPEHVRAASRLRELYYSYSKSEDLINIGAYKRGTSKEIDEAIMYEPLIT 412 Query: 415 DFLKQSPSDLSSED 428 +FLKQ D S D Sbjct: 413 EFLKQGYKDKISID 426 >gi|313901517|ref|ZP_07834964.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter subterraneus DSM 13965] gi|313468212|gb|EFR63679.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter subterraneus DSM 13965] Length = 476 Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 155/372 (41%), Positives = 228/372 (61%), Gaps = 15/372 (4%) Query: 72 ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM- 129 + P+G I G V G+ FR++ GRV++ LG+P+DG +G ++ E Sbjct: 102 LMPLGDARAIRPGSRVEATGQGFRVAVGEGLLGRVLDGLGRPLDG-----QGPVAAEAWY 156 Query: 130 ---SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + PP + R+ + + G+R ID GQR+G+FAGSG+GKSTLL+M R Sbjct: 157 PAEADPPPPLARRPIREPLPVGVRAIDALLTCGRGQRVGIFAGSGVGKSTLLAMMTRHTA 216 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D V+++L+GER REVR+F++ +L + +++VVV AT+D ++R A A IAE+F Sbjct: 217 ADVVVVALIGERNREVRDFVDHHLAGSRRRTVVVAATADRPALVRIKAAQVATAIAEFFR 276 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G +VLL++DS+TR+A ++RE+ GE P RGYP SVF+ LPRLLER G ++G+ Sbjct: 277 DRGRHVLLVMDSVTRYAMALREVGLAVGEPPATRGYPPSVFAALPRLLERAG--TGDRGS 334 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT +VLVDGD+ N+P+AD+VR LDGHIVL+R LAEEG++P VD LASVSRL + Sbjct: 335 ITGFYTVLVDGDDFNEPVADAVRGTLDGHIVLSRQLAEEGQFPAVDVLASVSRLMPELVD 394 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 A L + + E RD+ IG Y+ G + +D+A+ ++P I FL Q + +S Sbjct: 395 AAHWAAAQRLRRWLGAYREARDLVEIGAYQRGTNPDVDRALERMPAIRAFLSQGRDEAAS 454 Query: 427 EDVFQEITKKLQ 438 F E +LQ Sbjct: 455 ---FSEAVARLQ 463 >gi|298345993|ref|YP_003718680.1| H(+)-transporting two-sector ATPase [Mobiluncus curtisii ATCC 43063] gi|304390249|ref|ZP_07372203.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298236054|gb|ADI67186.1| H(+)-transporting two-sector ATPase [Mobiluncus curtisii ATCC 43063] gi|304326731|gb|EFL93975.1| flagellar protein export ATPase FliI [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 444 Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 167/398 (41%), Positives = 235/398 (59%), Gaps = 8/398 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G + S+ + V L C VV G + +V+ ++ I P+ + + + Sbjct: 25 GEVESVVGLSVRVRGLQ---CSVGEVVLVGDDPGVPAEVVALDAGIASCMPLDNLDGLRV 81 Query: 84 GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G V G P GRVI+A G+P+DG + D + I P A+ R R++ Sbjct: 82 GSPVRGTGLPATVPVGPALLGRVIDAAGRPLDGKGPIYAAD-RVPIHGAAPNALERARID 140 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 G+RV+D L GQRIG+FAGSG+GKSTL+SM AR + +I+LVGERGREV Sbjct: 141 MPVAMGVRVLDTLVTLGRGQRIGLFAGSGVGKSTLMSMIARGTNAEVCVIALVGERGREV 200 Query: 203 REFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 REF+ED LG+ L +SVVVVATSDESP+LRK A TA +AEY+ G +VLL++DS+TR Sbjct: 201 REFLEDDLGEEGLSRSVVVVATSDESPMLRKRAAFTATRVAEYYRDAGRHVLLMMDSLTR 260 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 + REI + GE P RGYP S FS + +LLER G G++T + +VLVDGD+HN Sbjct: 261 TCMAQREIGLSVGEPPATRGYPPSTFSMMAQLLERAG--SGAIGSVTGIYTVLVDGDDHN 318 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD RSILDGH+VL+R LA G YP +D L S+SR+A K + ++++ ++L ++ Sbjct: 319 EPIADQARSILDGHVVLDRKLAVAGHYPAIDALGSISRVASKVTTREQREAATALRQIMG 378 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +D+ +G Y+ G + +D AV I FL Q Sbjct: 379 AKRSVQDLLDVGAYQAGTNPEVDTAVKYDAEIEAFLTQ 416 >gi|42526727|ref|NP_971825.1| flagellum-specific ATP synthase FliI [Treponema denticola ATCC 35405] gi|41817042|gb|AAS11736.1| flagellum-specific ATP synthase FliI [Treponema denticola ATCC 35405] Length = 474 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 168/384 (43%), Positives = 233/384 (60%), Gaps = 7/384 (1%) Query: 55 NSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 N D L +V+ +N IV + + + +GDLV G P GRV++AL K Sbjct: 52 NPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNILLGRVVDALCKS 111 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 DG +++ P AM R+ + + TGIR ID + GQR+G+FAG+GI Sbjct: 112 ADGKPEPYSAK-RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGI 170 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231 GKSTLL M AR+ D +I+L+GERGREV +FIE LG + LK SV+V ATSD+S + R Sbjct: 171 GKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALAR 230 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 TA IAEYF +G +V+L+ DS+TRFA + REI GE P RGY SVFS LP Sbjct: 231 IRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLP 290 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 +LLER G SEK G+IT +VLV+GD+ N+PI+D+VR ILDGHIVL+R+LAE G+YP V Sbjct: 291 KLLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAV 348 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 + L S+SRL+++ + K + L+ + E+ D+ +G Y+ G +D A+ P Sbjct: 349 NVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYP 408 Query: 412 IIYDFLKQSPSDLSS-EDVFQEIT 434 IYDFL Q D + +D Q+++ Sbjct: 409 RIYDFLTQEVDDPAKLKDTLQKLS 432 >gi|89098641|ref|ZP_01171523.1| flagellum-specific ATP synthase [Bacillus sp. NRRL B-14911] gi|89086603|gb|EAR65722.1| flagellum-specific ATP synthase [Bacillus sp. NRRL B-14911] Length = 438 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 168/399 (42%), Positives = 239/399 (59%), Gaps = 8/399 (2%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACW 101 VC+ V GK + +V+ + V + P EI+ G LV + I Sbjct: 42 VCI--IHVGSGKKRKIMAEVVGFKEENVILMPYTAISEIAPGSLVEATLKPLEIKIGTSL 99 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 G VI+ALG P+DG +L KG S+ P MNR + + G+R ID + +G Sbjct: 100 IGEVIDALGHPLDGK-ALPKGLASVPTEQDPPNPMNRPPISAPVEVGVRAIDSLLTVGYG 158 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 QR+G+FAGSG+GKSTLL M AR+ D +I+L+GERGREVREFIE+ LG+ LK+S+V+ Sbjct: 159 QRVGIFAGSGVGKSTLLGMVARNTKADLNVIALIGERGREVREFIENDLGEEGLKRSIVI 218 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 ATSD+ ++R TA IAEYF KG NV+L++DS+TR A + RE+ GE P + Sbjct: 219 AATSDQPALMRIKGAYTATAIAEYFRDKGLNVVLMMDSVTRVAMAQREVGLAIGEPPTTK 278 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GY SVF+ LP+LLER G + K G+ITA +VLVDGD+ N+PIAD+VR ILDGH VL+R Sbjct: 279 GYTPSVFAVLPKLLERTGTNHK--GSITAFYTVLVDGDDMNEPIADTVRGILDGHFVLDR 336 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LA +G+YP ++ L SVSR+ + + KK L + + + D+ IG Y+ G Sbjct: 337 ALANKGQYPAINVLKSVSRVMNNIVPHEHKKSAELLRERLSTYINSEDLINIGAYKKGTS 396 Query: 401 LILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438 +D+AV P I FLKQ + ++ +D Q + + ++ Sbjct: 397 REIDQAVRLYPEIISFLKQGTEEKVTMQDSIQHLLRLME 435 >gi|325473789|gb|EGC76977.1| flagellum-specific ATP synthase FliI [Treponema denticola F0402] Length = 474 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 168/384 (43%), Positives = 233/384 (60%), Gaps = 7/384 (1%) Query: 55 NSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 N D L +V+ +N IV + + + +GDLV G P GRV++AL K Sbjct: 52 NPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGDLVIASGEILSVPVGNVLLGRVVDALCKS 111 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 DG +++ P AM R+ + + TGIR ID + GQR+G+FAG+GI Sbjct: 112 ADGKPEPYSAK-RYPVVAPPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGI 170 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231 GKSTLL M AR+ D +I+L+GERGREV +FIE LG + LK SV+V ATSD+S + R Sbjct: 171 GKSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDQSALAR 230 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 TA IAEYF +G +V+L+ DS+TRFA + REI GE P RGY SVFS LP Sbjct: 231 IRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLP 290 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 +LLER G SEK G+IT +VLV+GD+ N+PI+D+VR ILDGHIVL+R+LAE G+YP V Sbjct: 291 KLLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAV 348 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 + L S+SRL+++ + K + L+ + E+ D+ +G Y+ G +D A+ P Sbjct: 349 NVLKSISRLSNRVSGPNTKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYP 408 Query: 412 IIYDFLKQSPSDLSS-EDVFQEIT 434 IYDFL Q D + +D Q+++ Sbjct: 409 RIYDFLTQEVDDPAKLKDTLQKLS 432 >gi|30524894|gb|AAP34339.1|AF499777_7 HrcN [Xanthomonas axonopodis pv. glycines] Length = 442 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 159/368 (43%), Positives = 223/368 (60%), Gaps = 5/368 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + I ++ P M R+ +E+ TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + +D + L L+ ++ E + +G YR G D + D+A+ ++ I DFL Sbjct: 360 RVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419 Query: 419 QSPSDLSS 426 Q LS+ Sbjct: 420 QPTDQLSA 427 >gi|323530315|ref|YP_004232467.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia sp. CCGE1001] gi|323387317|gb|ADX59407.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia sp. CCGE1001] Length = 470 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 165/418 (39%), Positives = 242/418 (57%), Gaps = 9/418 (2%) Query: 13 EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIV 70 E S + + G + + V L V LG+ + N L +VI D+ Sbjct: 44 EILSTATIARSGKVLEVIGTLVKVAGLD--VTLGELCELRAANGKLLQHAEVIGFTRDVA 101 Query: 71 YICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIM 129 + P +IS V GR P GRVI++LG+PIDG LG + + Sbjct: 102 LLSPFSRLADISRSTRVVGLGRSLTVPVGDSLLGRVIDSLGEPIDGLGPLGATE-QRPVF 160 Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189 + P M R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D Sbjct: 161 ANPPSPMTRRMIDTPLATGVRVVDGMMTLAEGQRMGIFAPAGVGKSTLLGMFARGAQCDV 220 Query: 190 VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248 +I+L+GERGREVREF+E LG + + +SVVV ATSD S I R A A IAE+F + Sbjct: 221 TVIALIGERGREVREFVELILGAEGMARSVVVCATSDRSSIERAKAAYVATAIAEHFRDR 280 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 G VLL++DS+TRFA + REI +GE P RG+P S+F+ELPRLLER G E G+IT Sbjct: 281 GQRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGMG--EHGSIT 338 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 A+ +VL + ++ NDPIA+ VR I+DGH++L+R +A + +YP +D LAS+SR+ + + D Sbjct: 339 AMYTVLAEDESGNDPIAEEVRGIVDGHMILSREIAAKNQYPAIDVLASLSRVMPQVMTPD 398 Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + + L L+ + E + IG Y+PG + + D+A+ ++ I F Q+ +L++ Sbjct: 399 YVRAAARLRELLAKHREVEMLLQIGEYQPGGNPLADEAIRKIDAIRAFFNQATHELAA 456 >gi|323490145|ref|ZP_08095365.1| flagellum-specific ATP synthase [Planococcus donghaensis MPA1U2] gi|323396193|gb|EGA89019.1| flagellum-specific ATP synthase [Planococcus donghaensis MPA1U2] Length = 438 Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 160/364 (43%), Positives = 234/364 (64%), Gaps = 11/364 (3%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDGDD 117 +V+ + + + P+ ++ G LV G + ++ PS G+V++ G P+D + Sbjct: 59 EVVGFKENRIMLMPLQDLSQVGPGCLVVATGGPLQIKVGPS--ILGKVLDGTGMPLD--E 114 Query: 118 SLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 SL L + PP + R R++K + G+R ID + GQRIGVFAGSG+GKST Sbjct: 115 SLLPRGLKKYSTNNAPPNPLKRPRIDKPLEVGVRAIDGLLTVGQGQRIGVFAGSGVGKST 174 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 L+ M AR+ D +I+LVGERGREVR+FIE LG + LKKSVVV ATSD++P+ R A Sbjct: 175 LMGMIARNTEADINVIALVGERGREVRDFIERDLGPEGLKKSVVVAATSDQTPMQRIKAA 234 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LTA IAEYF +G NV+L++DS+TRFA + RE+ GE P ++GY SVF+ LP+LLE Sbjct: 235 LTATAIAEYFRDQGKNVMLMMDSVTRFAMAQREVGLAVGEPPTSKGYTPSVFALLPKLLE 294 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R +A++G++P ++ +A Sbjct: 295 RSGTSSK--GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLDRKIAQKGQFPAINVMA 352 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 SVSR+ + S + + L+ +E + D+ IG Y+ G + +D A+ P+I + Sbjct: 353 SVSRVMHEVVSEEHQLAARDFKRLLAAYETSEDLINIGAYKSGANKEIDDAIRAYPVIKE 412 Query: 416 FLKQ 419 +L+Q Sbjct: 413 YLQQ 416 >gi|313905130|ref|ZP_07838499.1| flagellar protein export ATPase FliI [Eubacterium cellulosolvens 6] gi|313470033|gb|EFR65366.1| flagellar protein export ATPase FliI [Eubacterium cellulosolvens 6] Length = 434 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 155/345 (44%), Positives = 226/345 (65%), Gaps = 4/345 (1%) Query: 81 ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 I+ G V + G R RI GR+INA+G+PIDG ++ + S ++R Sbjct: 76 ITSGSFVRNTGHRLRIPVGEFLKGRIINAIGEPIDGKEAFPCNCDFYTVNSGYSNPLSRP 135 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 + G++ ID + GQRIG+FAGSG+GKSTLL M A++ D +I+LVGERG Sbjct: 136 PIRNRLNMGVKAIDGLNTIGKGQRIGIFAGSGVGKSTLLGMIAKNVTSDLNVIALVGERG 195 Query: 200 REVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REV EF+E LG + +K++V+VVATSD+ ++R APL A TIAEYF +G +VLL++DS Sbjct: 196 REVLEFVERDLGPEGMKRTVLVVATSDQPSMMRLKAPLVATTIAEYFRDQGMDVLLMMDS 255 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI +GE P+ARGY S++SE P+LLER G + +KG+IT + +VLV+GD Sbjct: 256 LTRFAMAQREIGLATGEPPIARGYTPSIYSEFPKLLERAG--QFKKGSITGIYTVLVEGD 313 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + N+PIAD+VR ILDGHIVL+R+LA + YP +D AS+SRL + S + +K+ S + + Sbjct: 314 DTNEPIADTVRGILDGHIVLSRALAAQNHYPAIDIGASISRLMVELVSPEHRKMASRMRN 373 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 ++ +++ D+ IG Y+ G + LD+AV + I FL Q + Sbjct: 374 ILGIYQKNADLIAIGAYKKGKNPALDEAVEKYGAINRFLMQGTQE 418 >gi|325917021|ref|ZP_08179260.1| Type III secretion system ATPase HrcN protein [Xanthomonas vesicatoria ATCC 35937] gi|325536772|gb|EGD08529.1| Type III secretion system ATPase HrcN protein [Xanthomonas vesicatoria ATCC 35937] Length = 442 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 159/370 (42%), Positives = 225/370 (60%), Gaps = 5/370 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + + + P G +S V GR P + GRV++ LG+P DG + Sbjct: 63 EVVGFSRTLALLAPFGELVGLSRETRVIGSGRPLAVPVGSALLGRVLDGLGEPADGQGPV 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + ++I ++ P M R+ +E+ TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 123 DCEEW-VQIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIEMILGEDGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D L S+S Sbjct: 302 MGET--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLGSLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + SA++++ L L+ + E + +G YR G D + D+A+ ++ I DFL Sbjct: 360 RVMSQIVSAEQRQYAGQLRRLLAKHNEVETLLQVGEYRQGSDAVADEAIARIDAIRDFLS 419 Query: 419 QSPSDLSSED 428 QS LS D Sbjct: 420 QSTDQLSDYD 429 >gi|309388820|gb|ADO76700.1| type III secretion system ATPase, FliI/YscN [Halanaerobium praevalens DSM 2228] Length = 435 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 161/404 (39%), Positives = 247/404 (61%), Gaps = 8/404 (1%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77 N+ G+I+ + + + + +G+ + +G+N D +V+ + + V + P+G Sbjct: 17 NMTRNFGHINRV--IGLVIESIGPQASIGELCLIKGENGDIKAEVVGFDDNKVLMMPIGE 74 Query: 78 GEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E I G V + ++ G++I+ G I G+D G ++ + +K P + Sbjct: 75 MEGIRPGARVIATDEKLKVKVGKELLGKIIDGSGNIISGEDPSGLNEVP--VNNKPPDPL 132 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R R++ G+R ID F GQR+G+FAGSG+GKSTLL M AR+ D +I LVG Sbjct: 133 TRARIKAPLSLGVRCIDGFLTCGKGQRMGIFAGSGVGKSTLLGMAARNTNADINVIGLVG 192 Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVR+FIE LG + L++S+VVVATSD+ +LR A A IAEYF +G++VLL+ Sbjct: 193 ERGREVRDFIEKDLGAEGLERSIVVVATSDQPALLRVKAANIATAIAEYFRDQGEDVLLM 252 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TR A ++RE+ GE P RGYP SVF+ELP+LLER G + + G+ITA+ +VLV Sbjct: 253 MDSVTRVAMALREVGLAIGEPPATRGYPPSVFAELPKLLERTGTN--DVGSITALYTVLV 310 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 +GD+ N+P++D+VR ILDGHI L+R LAE YP VD L+SVSR+ + S + + + Sbjct: 311 EGDDFNEPVSDTVRGILDGHISLSRELAESSHYPAVDVLSSVSRIMEDIVSKEHSQAAAK 370 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L +I + ++ D+ IG Y G + +D+A+ ++ I +FL Q Sbjct: 371 LQKIIATYNQSEDLINIGAYEKGSNPEVDRAIAKIDEINNFLTQ 414 >gi|157163914|ref|YP_001465995.1| flagellum-specific ATP synthase [Campylobacter concisus 13826] gi|112801755|gb|EAT99099.1| flagellar protein export ATPase FliI [Campylobacter concisus 13826] Length = 435 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 166/418 (39%), Positives = 242/418 (57%), Gaps = 7/418 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G I+ IT+ +T L +GD V V + K+ + LG V +I D YI P G E Sbjct: 21 GVITKITATTIEITGLRP--SIGDIVRIVAKDKSKNGLGMVTQIKTDGAYISPFGFVEGF 78 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 +GD V+ + I GRV++ KPIDG ++ + M IM AM R Sbjct: 79 RIGDFVYESDQGMSIPVGPNLLGRVVDPFMKPIDGKGAIDTTEY-MPIMRAPIDAMKRGL 137 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 + + F GI+ ID GQ++G+FAGSG+GKSTL+ M ++ +++L+GERGR Sbjct: 138 INEPFSVGIKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKNTLAPIKVVALIGERGR 197 Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 EV EFIE LG +L+ +V++VATSD+S ++RK A+++AEYF +G++VL I+DS+T Sbjct: 198 EVPEFIEKNLGGDLEGTVIIVATSDDSSLMRKYGAFCAMSVAEYFKQQGNDVLFIMDSVT 257 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RFA + REI GE P ++GYP S + LP+L+ER G E+ KG+ITA +VLV+GD+ Sbjct: 258 RFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-KEEGKGSITAFFTVLVEGDDM 316 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 +DPIAD RSILDGHIVL+R L + G YPP++ S SR+ + K L Sbjct: 317 SDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVMGDVIGKEHKLNAMKFKRLY 376 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +E + IG Y+ G D LD A+ + + FLKQS + + + +E+ K+ Sbjct: 377 SLLKENEVLLRIGAYQKGSDKELDLAISKKEFMESFLKQSSEESFALEEVEELLDKIN 434 >gi|89895732|ref|YP_519219.1| hypothetical protein DSY2986 [Desulfitobacterium hafniense Y51] gi|89335180|dbj|BAE84775.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 433 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 163/405 (40%), Positives = 242/405 (59%), Gaps = 9/405 (2%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76 +L+V G ++ I V + V +G++ +H + + +V+ + P+ Sbjct: 15 DLIVSHGRVAKI--VGLMIESDGPRVSVGEYCRIHTQQGKEIPAEVVGFRNSTTLLMPLA 72 Query: 77 IGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 E I+ GD +V + + GR+++ LG+P+DG + D ++ + P A Sbjct: 73 ELEGIAPGDRVVPQQHKLEVGVGQALLGRILDGLGRPLDGRPMVTHRDYPLQ--NAPPSA 130 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 R R+ G+R +D + GQRIG+FAGSG+GKSTLL M AR+ +I+LV Sbjct: 131 FLRPRIRDPLSVGVRTVDGILTIGRGQRIGIFAGSGVGKSTLLGMMARNTTAGVNVIALV 190 Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGRE+R+FIE LG+ L++SV+VVATSD+ ++R A TA IAEYF +G +VLL Sbjct: 191 GERGRELRDFIEKDLGEEGLERSVLVVATSDQPALVRLKAAFTATAIAEYFRDQGQDVLL 250 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DS+TRFA + RE+ +GE P RGYP SVF+ LP+LLER G SE G+IT + +VL Sbjct: 251 MMDSVTRFAMAQREVGLTTGEPPATRGYPPSVFAMLPKLLERSGMSEI--GSITGIYTVL 308 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 VDGD+HN+PIAD+VR ILDGHIVL R LA + YP +D L SVSR+ + + + K+L Sbjct: 309 VDGDDHNEPIADTVRGILDGHIVLTRELAMQNHYPAIDTLQSVSRVMNDIIAPEHKELAG 368 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L + + + +D+ IG Y G + +D A+ + I FL+Q Sbjct: 369 KLREHLAVYHDAKDLIDIGAYVTGSNPRIDAAIRHIEGINGFLRQ 413 >gi|317121818|ref|YP_004101821.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter marianensis DSM 12885] gi|315591798|gb|ADU51094.1| type III secretion system ATPase, FliI/YscN [Thermaerobacter marianensis DSM 12885] Length = 462 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 164/421 (38%), Positives = 240/421 (57%), Gaps = 18/421 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G++ + V V LG+ +H+ +V+ + P+G I Sbjct: 46 GWVEQV--VGLAVEARGPVSSLGELCWIHRAGLPPVPAEVVGFRGPHTLLMPLGDARAIR 103 Query: 83 LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM----SKVPPAMN 137 G LV GR F + GRV++ LG+P+DG +G +++E + PP + Sbjct: 104 PGSLVEATGRGFTVGVGEGLLGRVLDGLGRPLDG-----QGPVAVEAWYPAEGEPPPPLA 158 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 RQ + + G+R ID GQR+G+FAGSG+GKSTLL+M R D V+++L+GE Sbjct: 159 RQPIREPLPVGVRSIDALLTCGRGQRVGIFAGSGVGKSTLLAMMTRHTAADVVVVALIGE 218 Query: 198 RGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257 R REVR+F++ +L + +++VVV AT+D ++R A A IAE+F +G +VLL++D Sbjct: 219 RNREVRDFVDHHLAGSRRRTVVVAATADRPALVRIKAAQVATAIAEFFRDRGRHVLLVMD 278 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 S+TR+A ++RE+ GE P RGYP SVF+ LPRLLER G +G+IT +VLVDG Sbjct: 279 SVTRYAMALREVGLAVGEPPATRGYPPSVFAALPRLLERAG--TGPRGSITGFYTVLVDG 336 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 D+ N+PIAD+VR LDGHIVL+R LAEEG++P VD LASVSRL + L Sbjct: 337 DDLNEPIADAVRGTLDGHIVLSRQLAEEGQFPAVDVLASVSRLMPELVEPAHWAAAQRLR 396 Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 + + E RD+ IG Y+ G + +D+A+ ++P I FL Q + S F E +L Sbjct: 397 RWLGAYREARDLLEIGAYQRGSNPDVDRALERMPAIRAFLTQGRDEASP---FAEAVARL 453 Query: 438 Q 438 Q Sbjct: 454 Q 454 >gi|326796467|ref|YP_004314287.1| flagellar protein export ATPase FliI [Marinomonas mediterranea MMB-1] gi|326547231|gb|ADZ92451.1| flagellar protein export ATPase FliI [Marinomonas mediterranea MMB-1] Length = 449 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 169/415 (40%), Positives = 243/415 (58%), Gaps = 9/415 (2%) Query: 32 VYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90 V T+ + V LGD V G + +V+ N + Y+ P E I+ G V Sbjct: 31 VGLTMEAVGCKVALGDRCNVQVGASKWVESEVVGFNGKLTYLMPTEAIEGIAPGARVVPL 90 Query: 91 GR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 R+ GRVIN LG+P+DG + D S+ + ++ + R+ + GI Sbjct: 91 DDDSRMPVGDHLLGRVINGLGRPLDGRGPI-TSDESISLQGEIINPLQRKPISDTLDVGI 149 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 + I+ + GQR+G+FAGSG+GKS LL M R D I+ L+GERGREV+EFIE Sbjct: 150 KTINSLLTVGKGQRLGLFAGSGVGKSMLLGMMTRFTEADITIVGLIGERGREVKEFIEQI 209 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG+ L KSVV+ + +D+S ++R A + IAEYF +G NVLL++DS+TR+A + RE Sbjct: 210 LGEEGLAKSVVIASPADDSALMRLRAAMLTTRIAEYFRDQGRNVLLLMDSLTRYAQAQRE 269 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 IA + GE P +GYP SVFS+LP+L+ER G ++ G+ITA +VL +GD+ DPIAD+ Sbjct: 270 IALSVGEPPATKGYPPSVFSKLPQLVERAGNGKEGGGSITAFYTVLTEGDDQQDPIADAS 329 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R+ILDGHIVL+R LAEEG YP +D AS+SR S++ + + L +F++ RD Sbjct: 330 RAILDGHIVLSRRLAEEGHYPAIDIEASISRAMPHIVSSEHLQGAMRVKQLYSKFQQNRD 389 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-----DLSSEDVFQEITKKLQ 438 + +G Y G D LD+A+ +P I DFL+QS S + S E + Q +T Q Sbjct: 390 LISVGAYSKGSDPDLDQAIMLMPDINDFLRQSLSESFNLEQSLEKLVQALTSNQQ 444 >gi|159045786|ref|YP_001534580.1| flagellum-specific ATP synthase [Dinoroseobacter shibae DFL 12] gi|157913546|gb|ABV94979.1| flagellum-specific ATP synthase [Dinoroseobacter shibae DFL 12] Length = 450 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 165/440 (37%), Positives = 255/440 (57%), Gaps = 6/440 (1%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 M + +LA E S + + G++S+++ VT L+++ LGD VV G +G Sbjct: 1 MTPDFSSLAAQIEGASFHRI--SGHVSALSEAVVEVTGLNRHARLGDRVVLTGATGAEVG 58 Query: 61 -QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + + P E +L D + GR + PS W G+VI+ G+ DG Sbjct: 59 GEVVTLSGSHIEVLPEARLEGFALRDRAYFQGRSEVRPSEDWIGKVIDPFGRCHDGTIP- 117 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G + + P A+ R+ + +TG V + F PL GQR+G+FAGSG+GKSTLL Sbjct: 118 APGPTAYPLRGTPPSAITRKPLGHRLETGTAVFNTFLPLVRGQRLGLFAGSGVGKSTLLG 177 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 RS D +++L+GERGREVREF++ LG D +K+++VV ATSD++P+L++ A A Sbjct: 178 KLTRSVQADIAVVALIGERGREVREFVDRTLGADGMKRAIVVAATSDQAPLLKRRAAWLA 237 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 ++IAEYF G +VL + DS+TRFA + RE+A +GE P RG+P S + L ER G Sbjct: 238 MSIAEYFRDLGGHVLFLTDSVTRFAEAHREVALTAGEAPSMRGFPPSTGQMIMDLAERAG 297 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + KG+IT + SVLV G + ++P+AD +R +LDGH+VL+R +AE GR+P VD L SVS Sbjct: 298 PGPEGKGDITGIFSVLVAGSDMDEPVADILRGVLDGHVVLSREIAERGRFPAVDVLQSVS 357 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R A SA E +L+ + +E +R + G Y G D +D A+ + FL Sbjct: 358 RSLPDAASAAENELLQLARRTMGIYERSRLMIQSGLYTQGSDAEIDAAITAHRELEGFLA 417 Query: 419 QSPSDLSSEDVFQEITKKLQ 438 + + ++ D F+ + + L+ Sbjct: 418 RVETG-TAADSFEHLAQALR 436 >gi|21241185|ref|NP_640767.1| type III secretion system ATPase [Xanthomonas axonopodis pv. citri str. 306] gi|21106492|gb|AAM35303.1| HrcN protein [Xanthomonas axonopodis pv. citri str. 306] Length = 442 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 159/368 (43%), Positives = 223/368 (60%), Gaps = 5/368 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + I ++ P M R+ +E+ TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + +D + L L+ ++ E + +G YR G D + D+A+ ++ I DFL Sbjct: 360 RVMSQIVPSDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419 Query: 419 QSPSDLSS 426 Q LS+ Sbjct: 420 QPTDRLSA 427 >gi|220913729|ref|YP_002489038.1| ATPase, FliI/YscN family [Arthrobacter chlorophenolicus A6] gi|219860607|gb|ACL40949.1| ATPase, FliI/YscN family [Arthrobacter chlorophenolicus A6] Length = 446 Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 164/364 (45%), Positives = 227/364 (62%), Gaps = 6/364 (1%) Query: 74 PVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKV 132 P+G ++ GD G+ + P+ GRV++ LG+PIDG L G + ++ Sbjct: 72 PLGRLTGVAAGDPARSKGKPLMVPTGTGLFGRVLDGLGRPIDGKGPLVTGR-HVPADNES 130 Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P AM+R RVE TG+RV+D L GQR+G+FAGSG+GKS+LLSM AR + +I Sbjct: 131 PSAMHRARVEAPLHTGVRVLDTMATLGRGQRMGLFAGSGVGKSSLLSMVARGTDAEVSVI 190 Query: 193 SLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +LVGERGREVREF+ED LG + L +SVVVVATSDE ++R +TA IAE F G + Sbjct: 191 ALVGERGREVREFLEDDLGAEGLARSVVVVATSDEPALMRLRCAVTATRIAESFREAGRD 250 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L++DS+TR A + REI ++GE P RGYP S FS L RLLER G + E G++T + Sbjct: 251 VVLMMDSLTRVAMAQREIGLSAGEPPATRGYPPSTFSLLARLLERAGTA--ETGSVTGIY 308 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VLVDGD+HN+PIAD+ RSILDGH+VL+R LA G +P VD L SVSR+A K + Sbjct: 309 TVLVDGDDHNEPIADAARSILDGHVVLDRKLAVAGHFPSVDVLGSVSRVASKVNAPGNTA 368 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE-DVF 430 + + L + +D+ +G Y G + ++D A+ I FL+Q D + D + Sbjct: 369 VAAVLRKTLAARRNAQDLIDVGAYHRGTNPLVDAALDNEAAINSFLQQRMDDSTPHRDSW 428 Query: 431 QEIT 434 Q +T Sbjct: 429 QALT 432 >gi|220932523|ref|YP_002509431.1| flagellar protein export ATPase FliI [Halothermothrix orenii H 168] gi|219993833|gb|ACL70436.1| flagellar protein export ATPase FliI [Halothermothrix orenii H 168] Length = 437 Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 166/398 (41%), Positives = 237/398 (59%), Gaps = 12/398 (3%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACW 101 +CL + GK S +V+ + D V + P+G I+ G V G + + Sbjct: 45 ICL----IKNGKRSVK-AEVVGFDKDKVLLMPIGEMRGINPGARVVATGEKLTVKVGEGL 99 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 G+V+N LG+PI + G + +M++ P + R+R+ + GIR ID G Sbjct: 100 LGQVLNGLGQPISSGLKMRHGFTEVPVMAQPPDPLLRKRITEPLSLGIRSIDGLLTCGRG 159 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKSTLL M AR+ D +I LVGERGREVR+FIE LG + LKKS+VV Sbjct: 160 QRVGIFAGSGVGKSTLLGMAARNTEADINVIGLVGERGREVRDFIERDLGPEGLKKSIVV 219 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 VATSD+ ++R A A IAE+F +G NVLL++DS+TR A + RE+ GE P R Sbjct: 220 VATSDKPALVRVKAAYVATAIAEFFRDQGKNVLLMMDSVTRVAMAFREVGLAVGEPPATR 279 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SV++ELP+LLER G + + G ITA+ +VLV+GD+ N+P++D+VR ILDGHIVL+R Sbjct: 280 GYPPSVYAELPKLLERAGTN--QHGTITALYTVLVEGDDFNEPVSDTVRGILDGHIVLSR 337 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LA YP VD L SVSRL + + + ++ + E+ D+ IG Y+PG + Sbjct: 338 DLASRNHYPAVDVLESVSRLMPDIVDEEHLQAAGEVKKMLADYRESEDLINIGAYKPGSN 397 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +D+A+ + I FL+Q SS F+E L+ Sbjct: 398 PAIDRALENINDINTFLRQGIGQKSS---FEETVTMLK 432 >gi|86139477|ref|ZP_01058046.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter sp. MED193] gi|85823980|gb|EAQ44186.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter sp. MED193] Length = 442 Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 162/414 (39%), Positives = 251/414 (60%), Gaps = 4/414 (0%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNLGQVIRINLDIVYICP 74 SK L G +S I+ ++ L + +GD V+ +G + G+V++I+ + + + P Sbjct: 14 SKKLATSMGRVSGISGGEIEISGLEREARIGDRLVLVRGPGDELHGEVLKIDSNKISMLP 73 Query: 75 VGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134 + +++ D V +P W GRVI+ G+P+DG L +G+ + ++M+ P Sbjct: 74 DRSPDRVAINDRVKLMPAPDFAPGDNWIGRVIDPFGEPLDGRPLL-RGEKARDLMAPPPK 132 Query: 135 AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL 194 A R+ + TG+ V + P+ GQRIG+FAGSG+GKSTLL+ A+ D V+++L Sbjct: 133 AAGRRHMGARLDTGLSVFNTILPIVQGQRIGLFAGSGVGKSTLLAKMAQFMQADVVVMAL 192 Query: 195 VGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253 +GERGREV F++D LG + +K++VVV ATSD+S ++R+ + A+TIAE+F +G NVL Sbjct: 193 IGERGREVNHFVKDVLGPEGMKRAVVVAATSDQSALVRRRSAWAAMTIAEHFRDQGKNVL 252 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 + DS+TRFA + REI+ SGE P RG+P SV + L ER GP + +G+ITAV SV Sbjct: 253 FMADSVTRFAEAHREISAASGEAPSLRGFPPSVTPLITGLCERAGPGSEGQGDITAVFSV 312 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373 LV G + ++PIAD +R +LDGHIVLNR +AE GR+P VD SVSR A + +E + Sbjct: 313 LVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVSRSLPAAATDEENATI 372 Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL-KQSPSDLSS 426 + + +E++ + G Y G D++LD+AV P + F K+ P +S+ Sbjct: 373 LEVRKFLGSYEQSEVMIRAGLYSEGNDVVLDQAVKIWPELDAFFGKEDPQGVSN 426 >gi|15642991|ref|NP_228033.1| flagellum-specific ATP synthase [Thermotoga maritima MSB8] gi|4980716|gb|AAD35310.1|AE001706_9 flagellum-specific ATP synthase [Thermotoga maritima MSB8] Length = 438 Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 166/390 (42%), Positives = 245/390 (62%), Gaps = 11/390 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108 + GKN+ L +V+ + V + P + +G V + + S GRV + Sbjct: 49 LQNGKNA--LAEVVGFREESVILMPYEDVSGLKMGCEVIRTNKVLEVGVSRKMIGRVFDG 106 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG+PIDG + + +++ P + R+R++ GIR ID F + GQRIG+FA Sbjct: 107 LGRPIDGKPFVPED--RYPLINNPPNPLKRRRIKDPLPVGIRSIDGFITIGKGQRIGIFA 164 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 GSG+GKSTLL M AR+ D +++L+GERGREVREFIE LG+ LK+S++VV+TSD+ Sbjct: 165 GSGVGKSTLLGMIARNTTADINVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQP 224 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 + R + LTA +IAE+F G +VLL++DS+TR+A + RE+ GE P RGYP SVF Sbjct: 225 ALARVKSLLTATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVF 284 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + LP++LER G S+K G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE Sbjct: 285 AGLPKILERAGNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNH 342 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YP VD LASVSRL + + + ++ + L L+ +E +D+ IG Y+ G + ++DKAV Sbjct: 343 YPAVDVLASVSRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAV 402 Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 I FLKQ + +S F+E +KL Sbjct: 403 EMKDEIDSFLKQGVFEKAS---FEETLQKL 429 >gi|242309920|ref|ZP_04809075.1| flagellum-specific ATP synthase [Helicobacter pullorum MIT 98-5489] gi|239523217|gb|EEQ63083.1| flagellum-specific ATP synthase [Helicobacter pullorum MIT 98-5489] Length = 432 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 160/398 (40%), Positives = 238/398 (59%), Gaps = 5/398 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G ++ + + + LS + GD V +N +++G V + + I P E + Sbjct: 20 GLVTKVEQGFLSANGLSPRI--GDIVRITNENGNSMGMVTTLEANSFKITPFSFVEGTKV 77 Query: 84 GDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 GD V+ + +I GRVIN LG+PIDG L + + M I+ + AM R ++ Sbjct: 78 GDKVYLNTKGLQIPVGLELLGRVINPLGEPIDGKGEL-RAEGLMPIIRQPIAAMKRGMID 136 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + F G++ ID GQ++G+FAGSG+GKSTL+ M R +I+L+GERGREV Sbjct: 137 EVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRGAQAKIKVIALIGERGREV 196 Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 EF+E LG +L +V+VVATSD+SP++RK A+++AEYF +KG++VL ++DS+TRF Sbjct: 197 PEFVEKNLGGDLTNTVLVVATSDDSPLMRKYGAFAAMSVAEYFKAKGEDVLFMMDSVTRF 256 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A + REI GE P ++GYP SV + LP+L+ER G E+ KG+ITA +VLV+GD+ +D Sbjct: 257 AMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG-KEEGKGSITAYFTVLVEGDDMSD 315 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 PIAD RSILDGHIVL+RSL + G YPP++ L S SRL + L Sbjct: 316 PIADQSRSILDGHIVLDRSLTDFGIYPPINILNSASRLMGDVAQKEHILAARKFRRLYSM 375 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +E + IG Y+ G D +D+A+ + + D+L+Q+ Sbjct: 376 LKENEVLIRIGAYQAGSDKEIDEAIAKKSDMEDYLRQN 413 >gi|56964031|ref|YP_175762.1| flagellum-specific ATP synthase [Bacillus clausii KSM-K16] gi|56910274|dbj|BAD64801.1| flagellum-specific ATP synthase [Bacillus clausii KSM-K16] Length = 437 Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 159/379 (41%), Positives = 225/379 (59%), Gaps = 7/379 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ D + + P+ I+ G V G+ ++ G+++N +G+P +L Sbjct: 57 EVVGFKDDRILLMPLDDTRRIAPGSYVEGTGKPLNVACGPSLIGQIVNGVGEPFLQSAAL 116 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G D + + P + R R+ + G+R ID + GQR+G+FAGSG+GKSTL+S Sbjct: 117 GDTDANYSTDNSPPNPLERPRISEIMSVGVRAIDGLLTMGKGQRVGIFAGSGVGKSTLMS 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238 M A+ D +I+L+GERGREV+EF+E LG+ LKKSVVVVATSD+ +LR TA Sbjct: 177 MIAKQSDADVNVIALIGERGREVKEFVERDLGEEGLKKSVVVVATSDQPALLRVKGAQTA 236 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF KG NV L++DS+TRFA + REI GE P +GYP SVF+ +P+LLER G Sbjct: 237 TAIAEYFRDKGKNVNLMMDSVTRFAMAQREIGLAIGEPPTTKGYPPSVFAMMPKLLERSG 296 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + + G+IT + +VLVDGD+ N+PIAD+VR ILDGH VL+R LA G+YP V+ L SVS Sbjct: 297 TN--QSGSITGLYTVLVDGDDMNEPIADAVRGILDGHFVLDRQLANRGQYPAVNVLKSVS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RL D + +E++ D+ +G Y+ G +D A+H P + DFLK Sbjct: 355 RLMKDLVENDHLHAAKLFRQRLADYEQSEDLISLGAYKQGSSKDIDAAIHDHPAMLDFLK 414 Query: 419 QSPSDLSSEDVFQEITKKL 437 Q ++ D F E KL Sbjct: 415 Q---EVEESDSFAETKTKL 430 >gi|222099441|ref|YP_002534009.1| Flagellum-specific ATP synthase [Thermotoga neapolitana DSM 4359] gi|221571831|gb|ACM22643.1| Flagellum-specific ATP synthase [Thermotoga neapolitana DSM 4359] Length = 431 Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 164/390 (42%), Positives = 242/390 (62%), Gaps = 11/390 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108 + GKN+ L +V+ V + P + +G V R I GR+ + Sbjct: 42 LQNGKNA--LAEVVGFKEGNVVLMPYEDVSGLKMGCEVIRTNRVLEIGVGRNMIGRIFDG 99 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG+P+DG + + + + P + R+R++ G+R ID F + GQRIG+FA Sbjct: 100 LGRPLDGRSFVPEARYPL--TNSPPHPLKRKRIKDPLSVGVRAIDGFITIGKGQRIGIFA 157 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 GSG+GKSTLL M AR+ D +++L+GERGREVREFIE LG+ LK+S++VV+TSD+ Sbjct: 158 GSGVGKSTLLGMIARNTTADVCVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQP 217 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 + R + LTA +IAEY+ G +VLL++DS+TR+A + RE+ GE P RGYP SVF Sbjct: 218 ALARVKSLLTATSIAEYYRDLGYDVLLMVDSLTRWAMAQREVGLAIGEPPTTRGYPPSVF 277 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + LP++LER G S++ G+ITAV +VLV+ D+ N+PI+D+VRSI+DGHIVL+R LAE Sbjct: 278 AGLPKILERAGNSDR--GSITAVYTVLVEADDFNEPISDTVRSIVDGHIVLSRRLAESNH 335 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YP +D LASVSRL + S + K+ + L L+ +E +D+ IG Y+ G + ++DKA+ Sbjct: 336 YPAIDVLASVSRLMNDVVSEEHKEAANRLRSLLASYESAKDLIEIGAYKKGTNPLVDKAI 395 Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 I FL+Q + SS F+E ++L Sbjct: 396 EMQEDINAFLRQGIFEKSS---FEETVQRL 422 >gi|311068145|ref|YP_003973068.1| flagellum-specific ATP synthase [Bacillus atrophaeus 1942] gi|310868662|gb|ADP32137.1| flagellum-specific ATP synthase [Bacillus atrophaeus 1942] Length = 438 Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 169/389 (43%), Positives = 235/389 (60%), Gaps = 13/389 (3%) Query: 43 VCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSA 99 VCL +H +SD + +V+ + + + P IS G +V G RI A Sbjct: 42 VCL----IHPKGSSDKVIKAEVVGFQDENILLMPYLEAASISPGSIVEATGESLRIKVGA 97 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPL 158 G+VI+A G+P+DG L KG LS + PP M R + + G+R ID + Sbjct: 98 GLIGQVIDAFGEPLDGK-LLPKG-LSPVSTDQAPPNPMKRPPIREKMAVGVRSIDSLLTV 155 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217 GQRIG+FAGSG+GKSTL+ M A+ D +I+LVGERGREVREFIE LG + LK+S Sbjct: 156 GKGQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGERGREVREFIEKDLGPEGLKRS 215 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +VVVATSD+ ++R A TA IAEYF KG NV+ ++DS+TR A + REI +GE P Sbjct: 216 IVVVATSDQPALMRLKAAYTATAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPP 275 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GY SVF+ LPRLLER G +E+ G ITA +VLVDGD+ N+PIAD+VR ILDGHIV Sbjct: 276 TTKGYTPSVFAILPRLLERTGANEQ--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIV 333 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R+LA +G++P V+ L S+SR+ + + L+ ++ + D+ IG Y+ Sbjct: 334 LDRALANKGQFPAVNVLKSISRVMSNISAPHHLDAANKFRELLSTYQNSEDLINIGAYKR 393 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 G +D+A+ P + FLKQ + S+ Sbjct: 394 GSSREIDEAIQFYPQLIQFLKQGTEESST 422 >gi|330447946|ref|ZP_08311594.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328492137|dbj|GAA06091.1| conserved hypothetical protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 450 Score = 286 bits (732), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 154/366 (42%), Positives = 226/366 (61%), Gaps = 5/366 (1%) Query: 61 QVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 QV+ + +I Y+ PV +G + ++ G ++ S W GRV+N LG+P+D + L Sbjct: 61 QVVGFDHNIAYLMPVRQLGGLYAGAKVIPMQGGSTVNVSHEWIGRVVNGLGEPLDNGEPL 120 Query: 120 GKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 G+ LS+E P M RQ VE GI+ I+ + GQRIG+ AGSG+GKS L+ Sbjct: 121 QGGERLSLEPKPINP--MKRQPVESPLDVGIKAINGLLTVGKGQRIGLMAGSGVGKSVLM 178 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237 M + D +++ L+GERGREVREFIE LG+ K++V++ A +DESP++R A Sbjct: 179 GMITQFTAADIIVVGLIGERGREVREFIERNLGEEGRKRAVIIAAPADESPLMRLRATKL 238 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 +AEYF +G +VLL++DS+TR+A + REIA GE P +RGYP SVFS LP+LLER Sbjct: 239 CHRVAEYFRDQGKDVLLMMDSLTRYAMAQREIALALGEPPASRGYPPSVFSLLPQLLERA 298 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G++TA+ +VL +GD+ DP+ DS R+ILDGHIVL+R+LAE+G YP +D AS+ Sbjct: 299 GNGENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHIVLSRTLAEQGHYPAIDINASI 358 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR + + L +++ +++ +GGY+ G D LD+AV P + FL Sbjct: 359 SRCMSSCTEQAHVTVANQFRQLNANYQQVKELLPLGGYQQGQDPELDQAVMMQPQLKQFL 418 Query: 418 KQSPSD 423 +Q S+ Sbjct: 419 QQPVSE 424 >gi|170288527|ref|YP_001738765.1| flagellar protein export ATPase FliI [Thermotoga sp. RQ2] gi|170176030|gb|ACB09082.1| flagellar protein export ATPase FliI [Thermotoga sp. RQ2] Length = 438 Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 167/391 (42%), Positives = 245/391 (62%), Gaps = 13/391 (3%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108 + GKN+ L +V+ + V + P + +G V + + S GRV + Sbjct: 49 LQNGKNA--LAEVVGFREESVILMPYEDVSGLKMGCEVIRTNKVLEVGVSRKMIGRVFDG 106 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG+PIDG + + + + PP + R+R++ GIR ID F + GQRIG+F Sbjct: 107 LGRPIDGKPFVPEDRYPL---TNTPPNPLKRRRIKDPLPVGIRSIDGFITVGKGQRIGIF 163 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKSTLL M AR+ D +++L+GERGREVREFIE LG+ LK+S++VV+TSD+ Sbjct: 164 AGSGVGKSTLLGMIARNTTADINVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQ 223 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 + R + LTA +IAE+F G +VLL++DS+TR+A + RE+ GE P RGYP SV Sbjct: 224 PALARVKSLLTATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSV 283 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F+ LP++LER G S+K G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE Sbjct: 284 FAGLPKILERAGNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESN 341 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP VD LASVSRL + + + ++ + L L+ +E +D+ IG Y+ G + ++DKA Sbjct: 342 HYPAVDVLASVSRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKA 401 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 V I FLKQ + +S F+E +KL Sbjct: 402 VEMKDEIDSFLKQGVFEKAS---FEETLQKL 429 >gi|90577384|ref|ZP_01233195.1| putative flagellum-specific ATP synthase [Vibrio angustum S14] gi|90440470|gb|EAS65650.1| putative flagellum-specific ATP synthase [Vibrio angustum S14] Length = 449 Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 151/361 (41%), Positives = 222/361 (61%), Gaps = 3/361 (0%) Query: 61 QVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 QV+ + +I Y+ PV +G + ++ G ++ S W GRV+N LG+P+D L Sbjct: 61 QVVGFDHNIAYLMPVRQLGGLYAGAKVIPMQGGSTVNVSHKWIGRVVNGLGEPLDNGSPL 120 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G+ S+ + K M RQ VE GI+ I+ + GQRIG+ AGSG+GKS L+ Sbjct: 121 QGGE-SLSLEPKPINPMKRQPVESPLDVGIKAINGLLTVGKGQRIGLMAGSGVGKSVLMG 179 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238 M + D +++ L+GERGREVREFIE LG+ K++V++ A +DESP++R A Sbjct: 180 MITKYTAADIIVVGLIGERGREVREFIERNLGEEGRKRAVIIAAPADESPLMRLRATKLC 239 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +AEYF +G +VLL++DS+TR+A + REIA GE P +RGYP SVFS LP+LLER G Sbjct: 240 HRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSLLPQLLERAG 299 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G++TA+ +VL +GD+ DP+ DS R+ILDGHIVL+R+LAE+G YP +D AS+S Sbjct: 300 NGENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHIVLSRTLAEQGHYPAIDINASIS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R + + L +++ +++ +GGY+ G D LD+AV P + FL+ Sbjct: 360 RCMSSCTEQAHVTVANQFRQLNANYQQVKELLPLGGYQQGQDPELDQAVMMQPQLKQFLQ 419 Query: 419 Q 419 Q Sbjct: 420 Q 420 >gi|126697822|ref|YP_001086719.1| flagellum-specific ATP synthase [Clostridium difficile 630] gi|115249259|emb|CAJ67072.1| ATP synthase subunit beta FliI [Clostridium difficile] Length = 439 Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 157/348 (45%), Positives = 224/348 (64%), Gaps = 13/348 (3%) Query: 97 PSACWC-----GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 P + C G+V++ LG PID D++ GD + ++ P M R+++ +TG+R Sbjct: 95 PLSVMCSDNLLGKVLDGLGNPIDNSDAV-LGD-RYNLNNEPPDPMKRKKIRNIMETGVRA 152 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 ID FT GQRIG+FAGSG+GKST L M AR+ D +I+L+GERGREV +FI+ LG Sbjct: 153 IDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAKADVNVIALIGERGREVLDFIDKDLG 212 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + +KKSVVV ATSD++P++R LTA IAEYF +G V+L++DS+TRFA + RE+ Sbjct: 213 EEGMKKSVVVCATSDKAPLVRLKGALTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVG 272 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 GE P +GY SVF+ LP+L+ER G S+K G+ITA +VLVDGD+ N+PIAD+ R Sbjct: 273 VAIGEPPAQKGYTPSVFAMLPKLMERTGTSDK--GSITAFYTVLVDGDDFNEPIADTTRG 330 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 ILDGHIVL+R LA + YP +D L S+SRL ++ S ++ K+ S ++ + E D+ Sbjct: 331 ILDGHIVLSRDLANKNHYPSIDVLNSLSRLMNEIASKEDIKIASFARDMLAEYREAEDLI 390 Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 IG Y G + +D+A++ I +FLKQ ++ SS F E L+ Sbjct: 391 NIGAYASGTNKKIDEAIYYHEHIINFLKQGINEKSS---FNETISSLR 435 >gi|77464910|ref|YP_354414.1| H+-transporting two-sector ATPase, alpha/beta subunit [Rhodobacter sphaeroides 2.4.1] gi|77389328|gb|ABA80513.1| H+-transporting two-sector ATPase, alpha/beta subunit [Rhodobacter sphaeroides 2.4.1] Length = 436 Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 169/414 (40%), Positives = 244/414 (58%), Gaps = 2/414 (0%) Query: 11 LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70 LAE + +L + G ++ I +V L Q LGD V G G+V+R++ V Sbjct: 9 LAEIAAISLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSSHEV 68 Query: 71 YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 I P G E +++GD V G I+P W GR+++ LG+P+DG L +G + + + Sbjct: 69 TILPDGSPEGLAIGDAVALVGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 P A R+ + TG+ V D PL GQRIG+FAGSG+GKS+LL+ FARS D V Sbjct: 128 AAPQAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187 Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I LVGERGRE+REF E LG + ++VVV ATSD+SP++R+ A+ +AE+F +G Sbjct: 188 VIGLVGERGRELREFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VLL++DSITRFA + RE+A GE RG+P S + L ER GP + G+ITA Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGAEGTGDITA 307 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 V SVLV G + +P+AD +R +LDGH+V++R +AE GR+P +D L SVSR +A S E Sbjct: 308 VFSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSVSRALPEAASTAE 367 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L++ L+ ++ + G Y G D ++D A+ P + FL + SD Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDASD 421 >gi|255022048|ref|ZP_05294054.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC 51756] gi|254968534|gb|EET26090.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC 51756] Length = 448 Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 164/374 (43%), Positives = 213/374 (56%), Gaps = 15/374 (4%) Query: 58 NLGQVIRINLDIVYICPVG------IGEEISLGDLVFHWGRFRISPSACWCGRVINALGK 111 LG+VI + D + P G G + L D ++ GRVI+A G+ Sbjct: 68 RLGEVIGFHGDRAAVMPFGGLRGVFAGASVILADQ-----DSMVAVGDALLGRVIDAQGR 122 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 P+DG L + P ++R R+ K G+R I+ + GQRIG+FAGSG Sbjct: 123 PLDGRPLLATQRRPLR--QPAPHPLHRARIVKPLDVGVRAINALLTVGEGQRIGLFAGSG 180 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILR 231 +GKS LL M AR D V+I+L+GERGREVREF+ED LGD L SV+VVAT+D PILR Sbjct: 181 VGKSVLLGMMARHTQADVVVIALIGERGREVREFVEDILGDGLSHSVLVVATADAPPILR 240 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A IAE+F +G VLLI+DS+TR+A + RE+ +GELP +GYP SVFS L Sbjct: 241 MRGAEYATAIAEHFRDQGKRVLLIMDSLTRYAMAAREVGLTAGELPATKGYPPSVFSTLS 300 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 L ER G + E G ITA SVL +GD+ DP+AD+ RSILDGHIVL+R LA G P + Sbjct: 301 VLTERAGTA--ENGAITAFYSVLTEGDDLQDPVADAARSILDGHIVLSRDLAAAGVLPAI 358 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 DP S SR+ + LV + + E D+ IG YR G D LD A+ + P Sbjct: 359 DPAVSASRVMRSIVDTEHLALVQRVMSWWGNYREKSDLIAIGAYRQGSDPTLDMAMQKYP 418 Query: 412 IIYDFLKQSPSDLS 425 I DFL+Q P + S Sbjct: 419 AILDFLRQHPEESS 432 >gi|154249443|ref|YP_001410268.1| flagellar protein export ATPase FliI [Fervidobacterium nodosum Rt17-B1] gi|154153379|gb|ABS60611.1| flagellar protein export ATPase FliI [Fervidobacterium nodosum Rt17-B1] Length = 443 Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 172/423 (40%), Positives = 254/423 (60%), Gaps = 11/423 (2%) Query: 1 MQKNLETLAQLAEDYSKNL--VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 +Q+N++ L ++ ED K L G + I + T+ LG+ N Sbjct: 6 LQENIKFL-EIIEDKVKKLNPYEYAGEVQKIIGL--TIESRGPDAALGELCKILVGNKKA 62 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDD 117 L +V+ D+ + P+ + G V GR P GRVI+ALG+PIDG Sbjct: 63 LAEVVGFKEDLTILMPLEDVTGLKKGCEVLKTGRTVSVPVGEELKGRVIDALGRPIDGKR 122 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + K +I+S+ P + R+R+ + G+R ID F L GQRIG+FAGSG+GKSTL Sbjct: 123 LVLKE--YRQIVSEAPNPLIRKRILEPLPVGVRAIDGFLTLGKGQRIGIFAGSGVGKSTL 180 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M AR+ D +I+L+GERGREVREFIE LG+ +K+SVVVV+TSD+ +LR A L Sbjct: 181 LGMIARNTTADINVIALIGERGREVREFIEKDLGEEGIKRSVVVVSTSDQPALLRIKALL 240 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA TIAEYF KG V+L++DS+TR+A + RE+ GE P RGYP SVF++LP++LER Sbjct: 241 TATTIAEYFRDKGYAVMLMVDSLTRWAMAQREVGLAIGEPPTTRGYPPSVFAQLPKILER 300 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S +KG+IT + +VLV+ D+ N+PI+D+VR I+DGHI+L+R LAE +P +D L S Sbjct: 301 AGNS--DKGSITGIYTVLVEADDFNEPISDTVRGIVDGHIILSRKLAESNHFPAIDVLMS 358 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SRL + + ++ +I + + +D+ +G Y+ G + +DK++ + I F Sbjct: 359 ISRLMVDITKPEHIQSARAIRDIIATYNDAKDLIDVGAYKKGANPKIDKSIELIDEINKF 418 Query: 417 LKQ 419 L+Q Sbjct: 419 LRQ 421 >gi|221636054|ref|YP_002523930.1| flagellar protein export ATPase FliI [Thermomicrobium roseum DSM 5159] gi|221157913|gb|ACM07031.1| flagellar protein export ATPase FliI [Thermomicrobium roseum DSM 5159] Length = 450 Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 162/360 (45%), Positives = 223/360 (61%), Gaps = 14/360 (3%) Query: 87 VFHWGRFRISPSAC-------WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 V H R +P A GRVI+ LG+PIDG L + + I P + R Sbjct: 82 VRHGSRVVRAPEALHVPVGPELLGRVIDGLGRPIDGKGPL-RCRRRLRIGGAPPSPLQRA 140 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 + TG+R ID GQR+G+FAGSG+GKSTLL M +R+ D +I+L+GERG Sbjct: 141 PIRDILPTGVRTIDALLTCGRGQRLGIFAGSGVGKSTLLGMISRNAVCDVRVIALIGERG 200 Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REV+EFIE LG L+++VVVV+TSD+ ++R A TA IAEYF +G +V+L++DS Sbjct: 201 REVQEFIERDLGPAGLEQAVVVVSTSDQPALMRIKAAWTATLIAEYFRDRGMSVVLMMDS 260 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TR A + RE+ +GE P RGYP SVF+ LPRLLER G E+G+ITA +VLV+GD Sbjct: 261 VTRLAMAQREVGLAAGEPPATRGYPPSVFALLPRLLERAG--NAEQGSITAFYTVLVEGD 318 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + N+PI+D+VR ILDGHIVL R+LA+ G YP +D LASVSRL + D + L S + Sbjct: 319 DLNEPISDTVRGILDGHIVLARTLADRGHYPAIDVLASVSRLMPSLVTPDHRALASEVRE 378 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 L+ +E RD+ IG Y G + +D+A+ +P I FL+Q P + ++ F E L+ Sbjct: 379 LLAAYESARDLIDIGAYVHGTNPTVDRALSLMPEIRRFLQQKPEERAT---FAETVAWLE 435 >gi|260574407|ref|ZP_05842411.1| ATPase, FliI/YscN family [Rhodobacter sp. SW2] gi|259023303|gb|EEW26595.1| ATPase, FliI/YscN family [Rhodobacter sp. SW2] Length = 437 Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 170/431 (39%), Positives = 255/431 (59%), Gaps = 6/431 (1%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 LA++A + +LV G I+ I V L++ LGD V+ +G + G+V+R+ Sbjct: 9 LAEIAGVQTTSLV---GRIAEIGRGTLRVAGLTEASALGDRVLIRGSGAVLGGEVLRLAR 65 Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 + V + P G E +++GD V GR I+P W GR+I+ GKP+DG +L +G Sbjct: 66 EGVTVLPDGSAEGLAIGDAVELVGRAEIAPDDSWIGRIIDPFGKPLDGR-ALFRGPKPRP 124 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + P A R+R+ + T + V D PL GQRIG+FAGSG+GKS+LL+ FAR Sbjct: 125 LRDAAPAAATRRRLGERLSTSVAVFDTLLPLVRGQRIGLFAGSGVGKSSLLAKFARGVTA 184 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D V+I+LVGERGRE+REF + LG + +SVVV ATSD+SP++R+ TA+ +AE+F Sbjct: 185 DVVVIALVGERGRELREFTDRVLGPQGMARSVVVTATSDQSPLIRRRCAWTAMAVAEHFR 244 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G +VL + DSITRFA + RE+ +GE RG+P S + L ER GP + G+ Sbjct: 245 DQGLHVLFLADSITRFAEAHREVVLAAGEEGNLRGFPPSTSHTIMSLAERAGPGPEGMGD 304 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITAV SVLV G + ++P+AD +R +LDGH+V++R +AE GRYP +D L SVSR +A + Sbjct: 305 ITAVFSVLVAGSDMDEPVADILRGVLDGHVVMDRKIAERGRYPAIDLLRSVSRSLPEAAN 364 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 E +++ L+ ++ + G Y G D ++D A+ P + FL + +D Sbjct: 365 LAENAMIAEARRLLGAYDRAEMMIQAGLYAKGSDPMVDAAIRVWPALDAFLAEDAAD-GV 423 Query: 427 EDVFQEITKKL 437 E F+++ L Sbjct: 424 EGSFRKLAACL 434 >gi|78045988|ref|YP_362163.1| type III secretion system ATPase [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927683|ref|ZP_08188911.1| Type III secretion system ATPase HrcN protein [Xanthomonas perforans 91-118] gi|462306|sp|P80153|HRPB6_XANEU RecName: Full=Probable ATP synthase hrpB6 gi|398113|gb|AAA27605.1| AA: 163-179 mononucleotide binding box A; 193-207 magnesium binding domain; 244-256 mononucleotide binding box B [Xanthomonas campestris] gi|984883|gb|AAB08461.1| HrpB6 [Xanthomonas euvesicatoria] gi|78034418|emb|CAJ22063.1| HrcN protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325541884|gb|EGD13398.1| Type III secretion system ATPase HrcN protein [Xanthomonas perforans 91-118] Length = 442 Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 161/377 (42%), Positives = 226/377 (59%), Gaps = 6/377 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELIGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + I ++ P M R+ +E TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + D + L L+ ++ E + +G YR G D + D+A+ ++ I DFL Sbjct: 360 RVMSQIVPYDHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419 Query: 419 QSPSDLSS-EDVFQEIT 434 Q LS+ E+ + +T Sbjct: 420 QPTDQLSAYENTLELLT 436 >gi|120554911|ref|YP_959262.1| flagellum-specific ATP synthase [Marinobacter aquaeolei VT8] gi|120324760|gb|ABM19075.1| flagellar protein export ATPase FliI [Marinobacter aquaeolei VT8] Length = 463 Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 155/391 (39%), Positives = 230/391 (58%), Gaps = 4/391 (1%) Query: 32 VYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW 90 V T+ C+ + +GD + QG ++ ++ +V+ D VY+ P+ E + G V Sbjct: 32 VGLTLECVGCPMVVGDRCLIQGDSATSVEAEVVGFEEDKVYLMPLTAIEGLKPGARVIPL 91 Query: 91 GRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 R+ GRV+N G P+DG L + + +++ + +NR V + GI Sbjct: 92 ASASRVPVGPQMLGRVVNGAGDPLDGKGPL-QAEARVQLTGDIINPLNRAPVRQSMDVGI 150 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 R I+ + GQR+G+FAGSG+GKS LL M R D ++ L+GERGREV+EFIED Sbjct: 151 RAINALLTVGQGQRLGLFAGSGVGKSMLLGMMTRFTDADITVVGLIGERGREVKEFIEDI 210 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LGD L +SVVV A +D+SP++R A + IAEY+ +G VLL++DS+TR+A + RE Sbjct: 211 LGDEGLARSVVVAAPADDSPLMRLRAAMLTTRIAEYYRDQGKRVLLLMDSLTRYAQAQRE 270 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 IA GE P +GYP SVF++LP+L+ER G G+ITA +VL +GD+ DPIAD+ Sbjct: 271 IALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDDQQDPIADAA 330 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R+ILDGHIVL+R LAEEG YP +D AS+SR+ + ++ + R+++ RD Sbjct: 331 RAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTDSEHFSRAQRFKQVYSRYQQARD 390 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +G Y G D D A+ + + FL+Q Sbjct: 391 LISVGAYVKGSDPETDFAIQHIGNMSQFLQQ 421 >gi|88800457|ref|ZP_01116021.1| flagellum-specific ATP synthase [Reinekea sp. MED297] gi|88776787|gb|EAR07998.1| flagellum-specific ATP synthase [Reinekea sp. MED297] Length = 486 Score = 285 bits (730), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 154/352 (43%), Positives = 216/352 (61%), Gaps = 22/352 (6%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEI 128 + P+ + E+ +GD + GRV+N G+PIDG +L + L+ E Sbjct: 88 VVPLEVANELVIGDELL--------------GRVVNGFGEPIDGKGALLCRAQQSLNGEY 133 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 ++ ++R+ + + GIR I+ + GQR+G+FAGSG+GKS LL M R D Sbjct: 134 INP----LHREPIRQPLDVGIRAINSLLTVGRGQRLGLFAGSGVGKSVLLGMMTRFTDAD 189 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 I+ L+GERGREV+EFIE+ LGD L +SVVV + +D++P+LR A IAEYF S Sbjct: 190 ITIVGLIGERGREVKEFIEEILGDEGLARSVVVASPADDAPLLRLRAAQYTTAIAEYFRS 249 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G VLL++DS+TR+A + REIA GE P +GYP SVF+ LP+L+ER G +EK G+I Sbjct: 250 QGKTVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFARLPQLVERAGNAEKGGGSI 309 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R+ILDGH VLNR LAEEG YP +D S+SR+ + S Sbjct: 310 TAFYTVLTEGDDQQDPIADSSRAILDGHFVLNRKLAEEGHYPAIDIEQSISRVMPQVVSE 369 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 D K + L + + RD+ IG Y G + +D+A+ PII DFL+Q Sbjct: 370 DHLKAAQATKQLWSTYSQNRDLISIGAYTKGSNQEIDQAIALQPIIRDFLRQ 421 >gi|294625830|ref|ZP_06704446.1| type III secretion system ATPase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599858|gb|EFF43979.1| type III secretion system ATPase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 448 Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 161/376 (42%), Positives = 225/376 (59%), Gaps = 11/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + I ++ P M R+ +E+ TG+R++D T L GQR+G+FA +G+GKSTL+ Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEQPMPTGVRIVDGLTTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S Sbjct: 302 MG--ENGSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV------PI 412 R+ + +D + L L+ ++ E + +G YR G D + D+A+ ++ Sbjct: 360 RVMSQIVPSDHSQAAGQLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIDKFDA 419 Query: 413 IYDFLKQSPSDLSSED 428 I DFL Q LS+ D Sbjct: 420 IRDFLSQPTDQLSAYD 435 >gi|88858105|ref|ZP_01132747.1| flagellum-specific ATP synthase [Pseudoalteromonas tunicata D2] gi|88819722|gb|EAR29535.1| flagellum-specific ATP synthase [Pseudoalteromonas tunicata D2] Length = 442 Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 152/362 (41%), Positives = 223/362 (61%), Gaps = 3/362 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ N D++Y+ P + G V + P GRV++ LG+PIDG + Sbjct: 61 EVVGFNGDVLYLMPNDALSGVLPGARVIPQVKEAGLPVGMSLLGRVVDGLGRPIDGLGPI 120 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 K + ++ + R+ + + G+R I+ + GQR+G+FAGSG+GKS LL Sbjct: 121 -KAEKKLKFAQNAINPLARRAITQPMDVGVRAINAVITVGQGQRMGLFAGSGVGKSVLLG 179 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238 M R D +++ LVGERGREV+EFIE+ LGD K+SVVV A +D SP++R TA Sbjct: 180 MMTRGTSADVIVVGLVGERGREVKEFIEEILGDEGRKRSVVVAAPADASPLMRLKGCETA 239 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 VTIAEYF +G NVLL+LDS+TR+A + REIA GE P +GYP SVF++LP L+ER G Sbjct: 240 VTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERAG 299 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 K +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R LA+ G YP +D S+S Sbjct: 300 NGGKGQGSITAFFTVLSEGDDMQDPIADAARAILDGHIVLSRELADSGHYPAIDIEKSIS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + S + L + +++ +D+ +G Y+ G D ILDK++ +P++ FL+ Sbjct: 360 RVMPQVVSEAHMQQARVLKQVYSLYQQNKDLITLGAYQKGADPILDKSISMMPMVNGFLQ 419 Query: 419 QS 420 Q+ Sbjct: 420 QT 421 >gi|153934199|ref|YP_001384903.1| flagellar protein export ATPase FliI [Clostridium botulinum A str. ATCC 19397] gi|153936379|ref|YP_001388372.1| flagellar protein export ATPase FliI [Clostridium botulinum A str. Hall] gi|152930243|gb|ABS35743.1| flagellar protein export ATPase FliI [Clostridium botulinum A str. ATCC 19397] gi|152932293|gb|ABS37792.1| flagellar protein export ATPase FliI [Clostridium botulinum A str. Hall] Length = 438 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 168/392 (42%), Positives = 239/392 (60%), Gaps = 9/392 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 +++ KN +V+ + V + P+G I+ G V G+ + S G+V++ Sbjct: 49 IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P++G++ + +++ S P M R+R++ TGI+ ID F + GQRIG+F Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKST L M A+ D +I+L+GERGREVR+FIE LG+ LKKSV+V ATSD+ Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R TA IAEYF +G V+L++DS+TRFA + REI GE P +GY SV Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F++LPRL+ER G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + Sbjct: 287 FAKLPRLMERTGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L+SVSRL + S + K L+ ++ + D+ IG Y G + +D A Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGVARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +H I FLKQ +S + F+E T LQ Sbjct: 405 IHYHESILSFLKQG---ISEQHSFEESTSILQ 433 >gi|294679037|ref|YP_003579652.1| flagellar protein export ATPase FliI [Rhodobacter capsulatus SB 1003] gi|294477857|gb|ADE87245.1| flagellar protein export ATPase FliI [Rhodobacter capsulatus SB 1003] Length = 440 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 156/402 (38%), Positives = 238/402 (59%), Gaps = 3/402 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82 G + + V+ L+ LGD ++ G +VI + V + E ++ Sbjct: 23 GRVFEVGKGTIEVSGLTTRATLGDRARIHAQSGPVFGAEVIALRRGAVTLLADCAVEGVA 82 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 +GD V G+ I+P W GR+++ G+P+DG L +G I + PPA R+R+ Sbjct: 83 IGDRVEVLGQAGIAPDDSWIGRIVDPFGRPLDGRPLL-RGGHDRNIRATPPPAAFRRRLG 141 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + +TG+ + PL GQRIG+FAGSG+GKS+LL+ FA+ D V+I+L+GERGRE+ Sbjct: 142 ERVETGLDAFNTLLPLVRGQRIGLFAGSGVGKSSLLAKFAKGVAADVVVIALIGERGREL 201 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 REF+E LG + + +SV+V ATSD+SP++R+ A+T+AEYF +G +VL + DS+TR Sbjct: 202 REFVEKTLGPEGMARSVIVAATSDQSPLVRRRCGWAAMTVAEYFRDQGKHVLFLADSVTR 261 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + RE+A +GE P RGYP S ++ L ER GP + G+ITAV SVLV G + Sbjct: 262 FAEAHREVALAAGEPPSLRGYPPSTSHQIMSLAERSGPGMEGAGDITAVFSVLVAGSDME 321 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +P+AD +R LDGH+VL+R +AE GR+P +D L SVSR +A + E +L++ L+ Sbjct: 322 EPVADILRGTLDGHVVLDRGIAERGRFPAIDLLRSVSRSLPEAATPAENELIAKARKLLG 381 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 ++ + G Y G D ++D A+ P + FL + +D Sbjct: 382 AYDRAEMMIQAGLYAAGSDPVIDAAIKVWPALDGFLARDAAD 423 >gi|256376470|ref|YP_003100130.1| ATPase, FliI/YscN family [Actinosynnema mirum DSM 43827] gi|255920773|gb|ACU36284.1| ATPase, FliI/YscN family [Actinosynnema mirum DSM 43827] Length = 439 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 150/338 (44%), Positives = 221/338 (65%), Gaps = 5/338 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG+P+DG L G S+ + P A+ RQ ++K + G+R +D P GQ Sbjct: 100 GRVLDGLGRPMDGGPPL-VGLESVTVDMTPPSALQRQLIDKPLQLGVRALDTMVPCGQGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS+LLSM R + +++L+GERGREVREFIE+ LG + L +SVVVV Sbjct: 159 RIGIFAGSGVGKSSLLSMITRGTEAEITVVALIGERGREVREFIENDLGPEGLARSVVVV 218 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+ P++R A A IAE++ +G N LL++DS+TR A + RE+ ++GE P RG Sbjct: 219 ATSDQPPMVRLRAGFVATRIAEWYRDRGANALLMMDSLTRIAMAQREVGLSAGEPPATRG 278 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF+ +P LLER GP+E+ G+IT + +VLV+GD+HN+PIAD+ RSILDGH+VL+R Sbjct: 279 FPPSVFALMPTLLERAGPAER--GSITGLYTVLVEGDDHNEPIADTARSILDGHVVLDRR 336 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA G +P +D L SVSR+ + +++ + L L+ + R++ IG Y G +L Sbjct: 337 LATSGHFPSIDVLESVSRVTGAVTTPEQRADAAQLRRLLAARRDVRELVEIGAYVGGTNL 396 Query: 402 ILDKAVHQVPIIYDFLKQS-PSDLSSEDVFQEITKKLQ 438 D+A+ P I L Q + S+E ++E+ + L Sbjct: 397 DADRAMALEPRINGLLTQDIHARTSAESSWEELRELLH 434 >gi|260886634|ref|ZP_05897897.1| flagellar protein export ATPase FliI [Selenomonas sputigena ATCC 35185] gi|330839534|ref|YP_004414114.1| ATPase, FliI/YscN family [Selenomonas sputigena ATCC 35185] gi|260863777|gb|EEX78277.1| flagellar protein export ATPase FliI [Selenomonas sputigena ATCC 35185] gi|329747298|gb|AEC00655.1| ATPase, FliI/YscN family [Selenomonas sputigena ATCC 35185] Length = 475 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 168/375 (44%), Positives = 231/375 (61%), Gaps = 16/375 (4%) Query: 70 VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL---- 124 V + P+G + I G ++V ++ GRV++ LG+PIDG KG L Sbjct: 109 VLLMPIGEMQGIGPGCEVVSAQKTLQVQVGPELLGRVLDGLGEPIDG-----KGPLLCKH 163 Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 + + P + R R+ G+R ID L GQRIG+ AGSG+GKSTLLSM AR+ Sbjct: 164 EYPLQADPPSPLERPRIRDSLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARN 223 Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D +I+LVGERGREV+EFIE LG+ LK+SVVVVATSD+ ++R +TA IAE Sbjct: 224 TEADISVIALVGERGREVKEFIERDLGEEGLKRSVVVVATSDKPALVRIKGAMTATAIAE 283 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 YF +G V+L++DS+TRFA + RE+ GE P RGY SVF+ LPRLLER G S K Sbjct: 284 YFRDQGKRVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFALLPRLLERAGTSRK- 342 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R++A + +P +D LASVSR+ ++ Sbjct: 343 -GSITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRAIAAQNHFPAIDVLASVSRVMNE 401 Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 K +L L+ ++E D+ IG Y G +D AV ++ I DFL+Q + Sbjct: 402 VVDEAHLKASQNLRALMAVYKEAEDLIHIGAYVKGSSQKIDTAVAKIDAINDFLRQGVFE 461 Query: 424 LSSEDVFQEITKKLQ 438 SS ++E K L+ Sbjct: 462 QSS---YEETEKTLE 473 >gi|281412275|ref|YP_003346354.1| flagellar protein export ATPase FliI [Thermotoga naphthophila RKU-10] gi|281373378|gb|ADA66940.1| flagellar protein export ATPase FliI [Thermotoga naphthophila RKU-10] Length = 438 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 166/390 (42%), Positives = 243/390 (62%), Gaps = 11/390 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108 + GKN+ L +V+ + V + P + +G V + + S GRV + Sbjct: 49 LQNGKNA--LAEVVGFREESVILMPYEDVSGLKMGCEVIRTNKVLEVGVSRKMIGRVFDG 106 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG+PIDG + + + + P + R+R++ GIR ID + GQRIG+FA Sbjct: 107 LGRPIDGKPFVPED--RYPLTNNPPNPLKRRRIKDPLPVGIRSIDGLITVGKGQRIGIFA 164 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 GSG+GKSTLL M AR+ D +++L+GERGREVREFIE LG+ LK+S++VV+TSD+ Sbjct: 165 GSGVGKSTLLGMIARNTTADVNVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQP 224 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 + R + LTA +IAE+F G +VLL++DS+TR+A + RE+ GE P RGYP SVF Sbjct: 225 ALARVKSLLTATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVF 284 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + LP++LER G S+K G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE Sbjct: 285 AGLPKILERAGNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNH 342 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YP VD LASVSRL + + + ++ + L L+ +E +D+ IG Y+ G + ++DKAV Sbjct: 343 YPAVDVLASVSRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAV 402 Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 I FLKQ + SS F+E +KL Sbjct: 403 EMKDEIDSFLKQGVFEKSS---FEETLQKL 429 >gi|255099418|ref|ZP_05328395.1| flagellum-specific ATP synthase [Clostridium difficile QCD-63q42] Length = 439 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 157/348 (45%), Positives = 224/348 (64%), Gaps = 13/348 (3%) Query: 97 PSACWC-----GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 P + C G+V++ LG PID D++ GD + ++ P M R+++ +TG+R Sbjct: 95 PLSVMCSDNLLGKVLDGLGNPIDNSDAV-LGD-RYNLNNEPPDPMKRKKIRNIMETGVRA 152 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 ID FT GQRIG+FAGSG+GKST L M AR+ D +I+L+GERGREV +FI+ LG Sbjct: 153 IDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAKADVNVIALIGERGREVLDFIDKDLG 212 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + +KKSVVV ATSD++P++R LTA IAEYF +G V+L++DS+TRFA + RE+ Sbjct: 213 EEGMKKSVVVYATSDKAPLVRLKGALTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVG 272 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 GE P +GY SVF+ LP+L+ER G S+K G+ITA +VLVDGD+ N+PIAD+ R Sbjct: 273 VAIGEPPAQKGYTPSVFAILPKLMERTGTSDK--GSITAFYTVLVDGDDFNEPIADTTRG 330 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 ILDGHIVL+R LA + YP +D L S+SRL ++ S ++ K+ S ++ + E D+ Sbjct: 331 ILDGHIVLSRDLANKNHYPSIDVLNSLSRLMNEIASKEDIKIASFARDMLAEYREAEDLI 390 Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 IG Y G + +D+A++ I +FLKQ ++ SS F E L+ Sbjct: 391 NIGAYASGTNKKIDEAIYYHEHIINFLKQGINEKSS---FNETISSLR 435 >gi|327399350|ref|YP_004340219.1| ATPase, FliI/YscN family [Hippea maritima DSM 10411] gi|327181979|gb|AEA34160.1| ATPase, FliI/YscN family [Hippea maritima DSM 10411] Length = 434 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 175/421 (41%), Positives = 249/421 (59%), Gaps = 15/421 (3%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGI 77 NL+V G I + + T + V +GD + +V+ + D V + P+G+ Sbjct: 15 NLIVTYGRIKKVAGITIKSTG-PKNVKIGDVCKIETDEGWIDSEVVGFDEDGVVLMPLGV 73 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKV 132 + + LV GR + S GRV+NALG+PIDG KG + +E + K Sbjct: 74 LDGVKSLSLVKSEGRGLSVPVSERLLGRVVNALGRPIDG-----KGPIPVEEYYPVYPKP 128 Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P + RQ +++ G++ ID + GQR+G+FAGSG+GKSTLL M AR+ D +I Sbjct: 129 VPPLERQIIKEPLSLGVKAIDGLLTIGKGQRVGIFAGSGVGKSTLLGMIARNSSADVNVI 188 Query: 193 SLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREVREFIE D + LK+SVVVVATSDE+ +LR+ A +IAE+F +G N Sbjct: 189 ALIGERGREVREFIERDLKEEGLKRSVVVVATSDEASLLRREGAFVATSIAEFFKDRGAN 248 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L++DS TRFA + REI GE P +GY SVF+ LPRL+ER G KG+ITA+ Sbjct: 249 VMLMMDSATRFAMAQREIGLAVGEPPTTKGYTPSVFTLLPRLMERAG--NFNKGSITAIY 306 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VLVDGD+ +PIAD+ RSILDGHIVL+R +AE GRYP VD L S+SRL + + K+ Sbjct: 307 TVLVDGDDLMEPIADASRSILDGHIVLSRKIAERGRYPAVDVLRSISRLMSSITTDEHKE 366 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVF 430 L + ++ + + D+ IG Y G + +D+A+ + + FL Q + S ED Sbjct: 367 LALKIRKVLSVYADAEDLINIGAYVKGSNKDIDEAIKYIDKVEGFLAQKIEESFSFEDTL 426 Query: 431 Q 431 Sbjct: 427 N 427 >gi|149182506|ref|ZP_01860979.1| flagellum-specific ATP synthase [Bacillus sp. SG-1] gi|148849766|gb|EDL63943.1| flagellum-specific ATP synthase [Bacillus sp. SG-1] Length = 440 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 161/362 (44%), Positives = 225/362 (62%), Gaps = 7/362 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + V + P EIS G LV + I G+V+++LG P+DG+ SL Sbjct: 57 EVVGFKEETVILMPYSNINEISPGSLVEATSKPLTIKVGHSLIGKVVDSLGNPLDGE-SL 115 Query: 120 GKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 KG L+ + PP+ + R + + + G+R ID + GQR+G+FAGSG+GKSTLL Sbjct: 116 PKG-LTPAFTEQDPPSPLTRPPINEKIEVGVRAIDSMLTVGKGQRVGIFAGSGVGKSTLL 174 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237 M AR+ D +I+L+GERGREVREFIE LG+ LKKS+VV ATSD+ ++R T Sbjct: 175 GMIARNTTADLNVIALIGERGREVREFIERDLGEEGLKKSIVVAATSDQPALMRIKGAFT 234 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF KG NV+L++DS+TR A + REI GE P +GY SVF+ LP+LLER Sbjct: 235 ATAIAEYFRDKGMNVMLMMDSVTRVAMAQREIGLAVGEPPATKGYTPSVFAILPKLLERT 294 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G +E G ITA +VLVDGD+ N+PIAD+ R ILDGHIVL+R++A +G++P ++ L SV Sbjct: 295 GTNEH--GTITAFYTVLVDGDDMNEPIADTTRGILDGHIVLDRNIANKGQFPAINVLRSV 352 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SRL + S D + + L+ + + D+ IG Y+ G +D+A+ P I FL Sbjct: 353 SRLMNHLASPDHLRAAEKIRELMSTYSNSEDLINIGAYKKGTSQEIDQAITYQPKILSFL 412 Query: 418 KQ 419 KQ Sbjct: 413 KQ 414 >gi|254973915|ref|ZP_05270387.1| flagellum-specific ATP synthase [Clostridium difficile QCD-66c26] gi|255091301|ref|ZP_05320779.1| flagellum-specific ATP synthase [Clostridium difficile CIP 107932] gi|255312959|ref|ZP_05354542.1| flagellum-specific ATP synthase [Clostridium difficile QCD-76w55] gi|255515718|ref|ZP_05383394.1| flagellum-specific ATP synthase [Clostridium difficile QCD-97b34] gi|255648812|ref|ZP_05395714.1| flagellum-specific ATP synthase [Clostridium difficile QCD-37x79] gi|260682031|ref|YP_003213316.1| flagellum-specific ATP synthase [Clostridium difficile CD196] gi|260685629|ref|YP_003216762.1| flagellum-specific ATP synthase [Clostridium difficile R20291] gi|306518927|ref|ZP_07405274.1| flagellum-specific ATP synthase [Clostridium difficile QCD-32g58] gi|260208194|emb|CBA60534.1| flagellum-specific ATP synthase [Clostridium difficile CD196] gi|260211645|emb|CBE01900.1| flagellum-specific ATP synthase [Clostridium difficile R20291] Length = 439 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 157/348 (45%), Positives = 224/348 (64%), Gaps = 13/348 (3%) Query: 97 PSACWC-----GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 P + C G+V++ LG PID D++ GD + ++ P M R+++ +TG+R Sbjct: 95 PLSVMCSDNLLGKVLDGLGNPIDNSDAV-LGD-RYNLNNEPPDPMKRKKIRNIMETGVRA 152 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 ID FT GQRIG+FAGSG+GKST L M AR+ D +I+L+GERGREV +FI+ LG Sbjct: 153 IDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAKADVNVIALIGERGREVLDFIDKDLG 212 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + +KKSVVV ATSD++P++R LTA IAEYF +G V+L++DS+TRFA + RE+ Sbjct: 213 EEGMKKSVVVCATSDKAPLVRLKGALTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVG 272 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 GE P +GY SVF+ LP+L+ER G S+K G+ITA +VLVDGD+ N+PIAD+ R Sbjct: 273 IAIGEPPAQKGYTPSVFAILPKLMERTGTSDK--GSITAFYTVLVDGDDFNEPIADTTRG 330 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 ILDGHIVL+R LA + YP +D L S+SRL ++ S ++ K+ S ++ + E D+ Sbjct: 331 ILDGHIVLSRDLANKNHYPSIDVLNSLSRLMNEIASKEDIKIASFARDMLAEYREAEDLI 390 Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 IG Y G + +D+A++ I +FLKQ ++ SS F E L+ Sbjct: 391 NIGAYASGTNKKIDEAIYYHEHIINFLKQGINEKSS---FNETISSLR 435 >gi|255305275|ref|ZP_05349447.1| flagellum-specific ATP synthase [Clostridium difficile ATCC 43255] Length = 439 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 157/348 (45%), Positives = 224/348 (64%), Gaps = 13/348 (3%) Query: 97 PSACWC-----GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 P + C G+V++ LG PID D++ GD + ++ P M R+++ +TG+R Sbjct: 95 PLSVMCSDNLLGKVLDGLGNPIDNSDAV-LGD-RYNLNNEPPDPMKRKKIRNIMETGVRA 152 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 ID FT GQRIG+FAGSG+GKST L M AR+ D +I+L+GERGREV +FI+ LG Sbjct: 153 IDAFTTCGEGQRIGIFAGSGVGKSTTLGMIARNAKADVNVIALIGERGREVLDFIDKDLG 212 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + +KKSVVV ATSD++P++R LTA IAEYF +G V+L++DS+TRFA + RE+ Sbjct: 213 EEGMKKSVVVCATSDKAPLVRLKGALTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVG 272 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 GE P +GY SVF+ LP+L+ER G S+K G+ITA +VLVDGD+ N+PIAD+ R Sbjct: 273 IAIGEPPAQKGYTPSVFAILPKLMERTGTSDK--GSITAFYTVLVDGDDFNEPIADTTRG 330 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 ILDGHIVL+R LA + YP +D L S+SRL ++ S ++ K+ S ++ + E D+ Sbjct: 331 ILDGHIVLSRDLANKNHYPSIDVLNSLSRLMNEIASKEDIKIASFARDMLAEYREAEDLI 390 Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 IG Y G + +D+A++ I +FLKQ ++ SS F E L+ Sbjct: 391 NIGAYASGTNKKIDEAIYYHEHIINFLKQGINEKSS---FNETISSLR 435 >gi|238927415|ref|ZP_04659175.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC 43531] gi|238884697|gb|EEQ48335.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC 43531] Length = 457 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 165/371 (44%), Positives = 228/371 (61%), Gaps = 11/371 (2%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS-LGKGDLSME 127 V + PVG + I G V GR R+ GRV++ LG PIDG L K + ++ Sbjct: 80 VLLMPVGEMQGIGPGCEVVATGRRLRVKVGMELLGRVLDGLGNPIDGKGPILAKEEYPLQ 139 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 PP + R R+ G+R ID L GQRIG+ AGSG+GKSTLLSM AR+ Sbjct: 140 ---APPPPLTRPRIHDNLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNTEA 196 Query: 188 DKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+LVGERGREVR+FIE LG+ LK+SVVVVATSD+ ++R +T IAEYF Sbjct: 197 DISVITLVGERGREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEYFR 256 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G V+L++DS+TRFA + RE+ GE P RGY SVF+ LPRLLER G S EKG+ Sbjct: 257 DQGRRVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTS--EKGS 314 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R +A + +P +D L+SVSR+ + Sbjct: 315 ITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLSSVSRVMYEVVE 374 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + + L+ ++E D+ IG Y G +D A+ ++ I +FL Q +++S Sbjct: 375 KRHLEAAQEMRQLMAVYQEAEDLIHIGAYVKGSSPKIDAAIQKIDGINEFLCQGIYEVTS 434 Query: 427 EDVFQEITKKL 437 ++E ++L Sbjct: 435 ---YEETEQRL 442 >gi|51894136|ref|YP_076827.1| flagellar-specific ATP synthase [Symbiobacterium thermophilum IAM 14863] gi|51857825|dbj|BAD41983.1| flagellar-specific ATP synthase [Symbiobacterium thermophilum IAM 14863] Length = 436 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 164/378 (43%), Positives = 231/378 (61%), Gaps = 7/378 (1%) Query: 52 QGKNSDNLGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALG 110 QG +V+ D + + P+G + + G D++ G + GRVI+ LG Sbjct: 46 QGDGRRVPAEVVGFREDRLLLMPLGETDGLRPGWDVIATGGPLQAPVGMGLLGRVIDGLG 105 Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170 PID L G I+ P + RQR+ + G+R +D + GQRIG+FAGS Sbjct: 106 NPIDDKGPL-MGCGFRPILGPAPDPLARQRIHRPLSLGVRALDALITVGMGQRIGIFAGS 164 Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPI 229 G+GKSTLL M AR+ D +I+LVGERGREVREFIE LG+ L++SVVVVATS++ + Sbjct: 165 GVGKSTLLGMVARATAADCNVIALVGERGREVREFIEKDLGEEGLRRSVVVVATSEQPSL 224 Query: 230 LRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 +R A L A IAEYF + G +V+L++DS+TR AH+ RE+ GE P RGY SVF+ Sbjct: 225 VRIRAALMATAIAEYFRDAHGLDVILMMDSVTRLAHAQREVGLAVGEPPATRGYTPSVFA 284 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 LPR+LER G G++T V +VLVDGD+ N+P+AD+VRSILDGH+VL+R LA G Y Sbjct: 285 MLPRVLERSG--TGPAGSVTGVYTVLVDGDDMNEPVADAVRSILDGHVVLSRKLANAGHY 342 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 P +DPL SVSR+ + + +K L L+ ++E D+ IG Y+ G + ++D+A+ Sbjct: 343 PAIDPLQSVSRVMPDVTTPEHRKQAQRLRALLSAYQEAEDLIQIGAYQQGTNPLVDEALA 402 Query: 409 QVPIIYDFLKQSPSDLSS 426 ++ I FL Q P+D S Sbjct: 403 KMDQIKRFLIQ-PADQPS 419 >gi|332981434|ref|YP_004462875.1| type III secretion system ATPase, FliI/YscN [Mahella australiensis 50-1 BON] gi|332699112|gb|AEE96053.1| type III secretion system ATPase, FliI/YscN [Mahella australiensis 50-1 BON] Length = 435 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 158/372 (42%), Positives = 226/372 (60%), Gaps = 4/372 (1%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVIN 107 ++ Q + + +V+ + + + P+G + I G V P+ GRV++ Sbjct: 46 ILSQDGSISAIAEVVGFREERMLLMPLGNVKGIGPGSTVIAMNTSLTVPAGPGLLGRVLD 105 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG+P+D L D+ ++ P + RQR+ + GI+ ID +GQR+GVF Sbjct: 106 GLGRPMDSAGPLA-ADMYYDVEKDPPDPLTRQRICEPIVLGIKAIDGLLTCGYGQRMGVF 164 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDES 227 AGSG+GKSTL+ M AR D +I+L+GERGREV+EFIE LG+ L +SV+VVATSD+ Sbjct: 165 AGSGVGKSTLMGMMARYASADVNVIALIGERGREVKEFIEKDLGEGLARSVLVVATSDQP 224 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 P++R A A IAEYF +G NVLL++DS+TRFA + RE+ GE PV+RGY SVF Sbjct: 225 PLIRTKAAFVATAIAEYFRDQGCNVLLMMDSLTRFAMAQREVGLAIGEPPVSRGYTPSVF 284 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + +PRLLER G S +KG+IT + +VLVDGD+ N+P+ D+ RSILDGHIVL+R LA Sbjct: 285 ATMPRLLERAGTS--DKGSITGIYTVLVDGDDFNEPVTDNARSILDGHIVLSRELANRNH 342 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YPP+D LASVSR+ + L S + ++ ++ D+ IG Y G +D A+ Sbjct: 343 YPPIDILASVSRVMPDVVTDRHMMLASQIKKIMAVYKGAEDLINIGAYVRGSSRDIDYAI 402 Query: 408 HQVPIIYDFLKQ 419 + I DFL+Q Sbjct: 403 DHIDDINDFLQQ 414 >gi|226950072|ref|YP_002805163.1| flagellar protein export ATPase FliI [Clostridium botulinum A2 str. Kyoto] gi|226843623|gb|ACO86289.1| flagellar protein export ATPase FliI [Clostridium botulinum A2 str. Kyoto] Length = 438 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 168/392 (42%), Positives = 239/392 (60%), Gaps = 9/392 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 +++ KN +V+ + V + P+G I+ G V G+ + S G+V++ Sbjct: 49 IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P++G++ + +++ S P M R+R++ TGI+ ID F + GQRIG+F Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKST L M A+ D +I+L+GERGREVR+FIE LG+ LKKSV+V ATSD+ Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R TA IAEYF +G V+L++DS+TRFA + REI GE P +GY SV Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F++LPRL+ER G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L+SVSRL + S + K L+ ++ + D+ IG Y G + +D A Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +H I FLKQ +S + F+E T LQ Sbjct: 405 IHYHESILSFLKQG---ISEQHSFEESTSILQ 433 >gi|205373376|ref|ZP_03226180.1| flagellum-specific ATP synthase [Bacillus coahuilensis m4-4] Length = 441 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 157/374 (41%), Positives = 228/374 (60%), Gaps = 7/374 (1%) Query: 50 VHQGKNSDNL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106 + +GK+ + +V+ D+V + P +I+ G LV G ++ G V+ Sbjct: 47 IRKGKSGSQIIKAEVVGFQHDMVLLMPYSTISDIAPGSLVEGTGEALKVKIGKGLIGSVL 106 Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 ++LG P+DG D L KG S + + P + R + + + G+R ID + GQR+G+ Sbjct: 107 DSLGNPLDGSD-LPKGLSSTSVENMPPNPLTRPTISEPLEVGVRAIDTMLTIGKGQRVGI 165 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSD 225 FAGSG+GKSTLL M AR+ D II+L+GERGREVREFIE LG + L +S+V+ ATSD Sbjct: 166 FAGSGVGKSTLLGMIARNTKADINIIALIGERGREVREFIERDLGPEGLSRSIVIAATSD 225 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 + ++R TA IAEYF +G NV+L++DS+TR A + RE+ GE P +GY S Sbjct: 226 QPALMRIKGAFTATAIAEYFRDQGMNVMLMMDSVTRVAMAQREVGLAVGEPPATKGYTPS 285 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VF+ LP+LLER G + G ITA +VLVDGD+ N+PIAD+ R ILDGHIVL+R +A Sbjct: 286 VFAILPKLLERTGTNHL--GTITAFYTVLVDGDDMNEPIADTTRGILDGHIVLDREIANR 343 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 G+YP ++ L SVSRL + K+ + + +L+ +E++ D+ IG Y+ G +D+ Sbjct: 344 GQYPAINILKSVSRLMNHLAENGHKESANKIRNLLSTYEKSEDLINIGAYKKGTSPEIDE 403 Query: 406 AVHQVPIIYDFLKQ 419 A+ P I FLKQ Sbjct: 404 AILYFPSILSFLKQ 417 >gi|154174001|ref|YP_001407433.1| flagellum-specific ATP synthase [Campylobacter curvus 525.92] gi|112803229|gb|EAU00573.1| flagellar protein export ATPase FliI [Campylobacter curvus 525.92] Length = 435 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 171/437 (39%), Positives = 249/437 (56%), Gaps = 10/437 (2%) Query: 4 NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQ 61 NLE L + +L G I+ IT+ +T L +GD V V + K+ + LG Sbjct: 2 NLERLNLKLKSKDLSLSNTFGIITKITATNIEITGLCP--SIGDIVRIVAKDKSKNGLGM 59 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120 V +I +I P G E +GD V+ + I GRV++ KP+DG ++ Sbjct: 60 VTQIKSGGAFISPFGFVEGFRIGDFVYASDQGMNIPVGRNLLGRVVDPFMKPVDGKGAIE 119 Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 + M IM AM R + + F GI+ ID GQ++G+FAGSG+GKSTL+ M Sbjct: 120 TSEY-MPIMKAPIDAMKRGLINEPFSVGIKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGM 178 Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240 ++ +++L+GERGREV EFIE LG NL +V+VVATSD+S ++RK A++ Sbjct: 179 IVKNTLAPIKVVALIGERGREVPEFIEKNLGGNLDGTVIVVATSDDSSLMRKYGAFCAMS 238 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 +AEYF ++G++VL I+DS+TRFA + REI GE P ++GYP S + LP+L+ER G Sbjct: 239 VAEYFKNQGNDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-K 297 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 E+ KG+ITA +VLV+GD+ +DPIAD RSILDGHIVL+R L + G YPP++ S SR+ Sbjct: 298 EEGKGSITAFFTVLVEGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRV 357 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 S + ++ L +E + IG Y+ G D LD A+ + + +FLKQ Sbjct: 358 MGDVISNEHRQNAMKFKRLYSLLKENEVLLRIGAYQRGSDKELDLAISKKEYMENFLKQD 417 Query: 421 PSDLSSEDVFQEITKKL 437 ++ F+EI L Sbjct: 418 AQEVYK---FEEIQSLL 431 >gi|148380617|ref|YP_001255158.1| flagellar protein export ATPase FliI [Clostridium botulinum A str. ATCC 3502] gi|148290101|emb|CAL84220.1| flagellum-specific ATP synthase [Clostridium botulinum A str. ATCC 3502] Length = 438 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 168/392 (42%), Positives = 239/392 (60%), Gaps = 9/392 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 +++ KN +V+ + V + P+G I+ G V G+ + S G+V++ Sbjct: 49 IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P++G++ + +++ S P M R+R++ TGI+ ID F + GQRIG+F Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKST L M A+ D +I+L+GERGREVR+FIE LG+ LKKSV+V ATSD+ Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R TA IAEYF +G V+L++DS+TRFA + REI GE P +GY SV Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F++LPRL+ER G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L+SVSRL + S + K L+ ++ + D+ IG Y G + +D A Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGVARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +H I FLKQ +S + F+E T LQ Sbjct: 405 IHYHESILSFLKQG---ISEQHSFEESTSILQ 433 >gi|83646016|ref|YP_434451.1| type III secretion system ATPase [Hahella chejuensis KCTC 2396] gi|83634059|gb|ABC30026.1| Flagellar biosynthesis/type III secretory pathway ATPase [Hahella chejuensis KCTC 2396] Length = 448 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 162/363 (44%), Positives = 222/363 (61%), Gaps = 5/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +VI + + P+ E +S V GR I S GRV++ LG PID + Sbjct: 68 LAEVIGFSRQEALLTPLSEMEGLSAHTEVIPTGRSHEIQISEGILGRVLDGLGAPIDDGE 127 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L G + I+S P + R+ VE TG+R ID GQR+GVFA +G+GKSTL Sbjct: 128 PL-TGGVPYPIISASPNPLTRRLVETPMTTGVRAIDGMLTCGEGQRMGVFAAAGVGKSTL 186 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 LSM R D V+I L+GERGREVR FIE LG + ++++VVV ATSD + R A Sbjct: 187 LSMITRHTDADIVVIGLIGERGREVRGFIERDLGAEGMQRAVVVAATSDRPAMERVKAGY 246 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F +G VLL++DS+TRFA ++REI +GE P RG+P +VF+ LP+LLER Sbjct: 247 VATAIAEHFRDQGKRVLLLIDSVTRFARALREIGLAAGEPPARRGFPPTVFATLPKLLER 306 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 GP K G I+A+ +VLV+GD+ +P+AD VRSILDGHIVL+R+LAE G +P VD LAS Sbjct: 307 AGPGAK--GAISALYTVLVEGDDMTEPVADEVRSILDGHIVLSRALAESGHFPAVDILAS 364 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 SRL + + ++ + L L+ R++E + IG Y+PG D + D A+ + I F Sbjct: 365 SSRLMNDIATPEQLQQARRLRQLLARYKEIELLVRIGEYQPGTDPLADAAIKAIEPINQF 424 Query: 417 LKQ 419 L+Q Sbjct: 425 LRQ 427 >gi|118474658|ref|YP_892815.1| flagellum-specific ATP synthase [Campylobacter fetus subsp. fetus 82-40] gi|261885883|ref|ZP_06009922.1| flagellum-specific ATP synthase [Campylobacter fetus subsp. venerealis str. Azul-94] gi|118413884|gb|ABK82304.1| flagellar protein export ATPase FliI [Campylobacter fetus subsp. fetus 82-40] Length = 434 Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 159/403 (39%), Positives = 235/403 (58%), Gaps = 7/403 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G I+ IT+ +T L +GD V + N + LG V +N + P G E Sbjct: 21 GIITKITTNNMEITGLRP--SIGDIVRIISIDGNKNELGMVTGLNQTGASVSPFGFVEGF 78 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 +GD V+ + I GRV++ P D ++ + + IM PAM R Sbjct: 79 KIGDRVYASDQGMSIPVGESLLGRVVDPFMNPKDSKGAI-EATTYVPIMQMPIPAMKRGL 137 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 + + F G++ ID GQ++G+FAGSG+GKSTL+ M ++ +++L+GERGR Sbjct: 138 INEPFSVGVKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKNSVAPIKVVALIGERGR 197 Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 EV EFIE L +L +V++VATSD+SP++RK A+++AEYF S G +VL I+DS+T Sbjct: 198 EVPEFIEKNLNGDLSNTVIIVATSDDSPLMRKYGAFCAMSVAEYFKSSGRDVLFIMDSVT 257 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RFA + REI GE P ++GYP SV + LP+L+ER G E+ KG+ITA +VLV+GD+ Sbjct: 258 RFAMAQREIGLALGEPPTSKGYPPSVLTILPQLMERAG-KEEGKGSITAFFTVLVEGDDM 316 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 +DPIAD RSILDGHIVL+R L + G YPP++ L S SR+ S + + S L Sbjct: 317 SDPIADQSRSILDGHIVLSRELTDFGIYPPINILNSASRVMGDVTSKEHRANASKFKRLF 376 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 +E + IG Y+ G+D LD A+ + + +F+KQ+P++ Sbjct: 377 SMLKENEVLIRIGAYQKGIDKELDSAISKKGFMEEFMKQNPTE 419 >gi|239628989|ref|ZP_04672020.1| ATPase FliI/YscN [Clostridiales bacterium 1_7_47_FAA] gi|239519135|gb|EEQ59001.1| ATPase FliI/YscN [Clostridiales bacterium 1_7_47FAA] Length = 434 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 164/372 (44%), Positives = 237/372 (63%), Gaps = 9/372 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + V + P E I G V + G R RI+ S GR ++A+G PIDG L Sbjct: 57 EVVGFRENRVLLMPYEEMEGIGYGSAVRNTGERLRIAVSNQLIGRTVDAMGMPIDG---L 113 Query: 120 GK-GDLSM-EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G D+S I K M R R++ + G++ ID + GQR+G+FAGSG+GKSTL Sbjct: 114 GPVDDVSYYPITGKPSNPMERPRIDTIIQMGVKAIDGLLTVGKGQRMGIFAGSGVGKSTL 173 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 + M A++ D +I+LVGER REV EFI LG+ LK+SV+VVATS +S ++R + Sbjct: 174 MGMIAKNVKADVNVIALVGERSREVVEFINRDLGEEGLKRSVLVVATSSQSAMMRSKCTM 233 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA TIAEYF +G +VLL++DS+TRFA + RE+ + GE PVARGY S++SELP+LLER Sbjct: 234 TATTIAEYFKDQGMDVLLMMDSLTRFAMAQREVGLSIGEPPVARGYTPSIYSELPKLLER 293 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G E+G+IT + +VLV+GD+ N+PI+D+VR I+DGHI+L+R +A + RYP +D L+S Sbjct: 294 SG--NFEEGSITGIYTVLVEGDDANEPISDTVRGIIDGHIMLSRKVAAKNRYPAIDILSS 351 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSRL + + + K+ L L+ +E D+ IG Y+ G + LD+A+ ++ IY F Sbjct: 352 VSRLMNDIVTPEHKEAAGKLRRLLAVYESNSDLVSIGAYKKGTNPELDEALERIDSIYGF 411 Query: 417 LKQSPSDLSSED 428 L+Q + S D Sbjct: 412 LQQKTDESFSLD 423 >gi|302338080|ref|YP_003803286.1| flagellar protein export ATPase FliI [Spirochaeta smaragdinae DSM 11293] gi|301635265|gb|ADK80692.1| flagellar protein export ATPase FliI [Spirochaeta smaragdinae DSM 11293] Length = 453 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 149/323 (46%), Positives = 213/323 (65%), Gaps = 4/323 (1%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S GRV++A+G+PIDG +G G S+ ++ P + R+ +++ TG+R ID TP Sbjct: 96 SEKMLGRVLDAMGRPIDGKGPVG-GAESVSTVNTPPNVLTRKPIKRQMVTGVRAIDTMTP 154 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216 + GQRIG+F+GSG+GKSTLL M AR+ D +I+L+GERGREV+EFIE LG + L++ Sbjct: 155 IGKGQRIGIFSGSGVGKSTLLGMIARNTSADINVIALIGERGREVQEFIEYDLGPEGLER 214 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 S++VV+T D +P+ R A TIAE+F KG +V+L+ DS+TRFA + REI GE Sbjct: 215 SILVVSTGDTAPLSRLRGAFVATTIAEHFRDKGADVMLLFDSVTRFARAQREIGLAVGEP 274 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P RGY SVFS LP+LLER G E+ G IT ++LV+GD+ ++P+AD+VR ILDGHI Sbjct: 275 PATRGYTPSVFSTLPKLLERCGTGER--GTITGFYTILVEGDDMDEPVADAVRGILDGHI 332 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LA+ RYP +D LAS+SRL K S +K L L+ + + D+ +G Y Sbjct: 333 VLSRKLAQAYRYPAIDVLASLSRLGTKITSPLVQKASGKLRSLLAVYTDAEDLINVGAYA 392 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G + +D+A+ ++ I +FL Q Sbjct: 393 EGSNSAIDEAIEKIDAIREFLGQ 415 >gi|269796395|ref|YP_003315850.1| type III secretion system ATPase, FliI/YscN [Sanguibacter keddieii DSM 10542] gi|269098580|gb|ACZ23016.1| type III secretion system ATPase, FliI/YscN [Sanguibacter keddieii DSM 10542] Length = 459 Score = 284 bits (726), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 159/384 (41%), Positives = 231/384 (60%), Gaps = 7/384 (1%) Query: 38 CLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRIS 96 L + LG+ +G ++ L +V+ + P+G I G G ++ Sbjct: 55 ALGDVLALGE--TGRGSDASMLAEVVAVTGSTARCMPLGAMRGIRPGLQARTTGGALQVP 112 Query: 97 PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 + GRV++ LG+P+DG L G ++ + + P + RQRV + G+R +D T Sbjct: 113 VGSGLLGRVVDGLGRPLDGRGPL-VGTTTVPLDGRAPHPLERQRVAQPLTLGVRTLDTLT 171 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215 + GQR+G+FAGSG+GKSTLLSM AR +I+LVGERGREVREF+ED LG + L Sbjct: 172 TVGRGQRMGLFAGSGVGKSTLLSMVARGTDAAVSVIALVGERGREVREFLEDDLGPEGLA 231 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 +SVVVVATSDE ++R A A IAE F G++V+L++DS+TR A + REI + GE Sbjct: 232 RSVVVVATSDEPALVRLRAAFVATRIAESFRESGEDVVLMMDSLTRVAMAQREIGLSVGE 291 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P RGYP S FS L LLER G S +G++T + +VLVDGD+HN+PIAD+ RSILDGH Sbjct: 292 PPATRGYPPSTFSVLAELLERAGTS--ARGSVTGIYTVLVDGDDHNEPIADAARSILDGH 349 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 +VL+R LA G +P +D L S+SR+A + SA ++ ++L ++ +D+ +G Y Sbjct: 350 VVLDRRLAVAGHFPSIDALGSISRVATRVTSAAQRADATALRKVMSARRAVQDLVDVGAY 409 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G + ++D A+ I FL+Q Sbjct: 410 VQGSNPLVDAALAHQGAIDAFLQQ 433 >gi|170690593|ref|ZP_02881760.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia graminis C4D1M] gi|170145028|gb|EDT13189.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia graminis C4D1M] Length = 464 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 165/420 (39%), Positives = 244/420 (58%), Gaps = 13/420 (3%) Query: 13 EDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIV 70 E S + + G + + V L V LG+ + N + L +VI D+ Sbjct: 38 EILSTASIARTGKVLEVIGTLVKVAGLD--VTLGELCELRAANGELLQHAEVIGFTRDVA 95 Query: 71 YICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME-- 127 + P +IS V GR P GRVI++LG+PIDG LG D E Sbjct: 96 LLSPFSRLADISRSTRVVGLGRSLTVPVGDALLGRVIDSLGEPIDG---LGPLDTIEERP 152 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + P M+R+ ++ TG+R++D L GQR+G+FA +G+GKSTLL MFAR Sbjct: 153 VFANPPSPMSRRMIDTPLATGVRIVDGMMTLAEGQRMGIFAPAGVGKSTLLGMFARGAQC 212 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+L+GERGREVREF+E LG + + +S+VV ATSD S I R A A IAE+F Sbjct: 213 DVTVIALIGERGREVREFVELILGPEGMARSIVVCATSDRSSIERAKAAYVATAIAEHFR 272 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G VLL++DS+TRFA + REI +GE P RG+P S+F+ELPRLLER G E G+ Sbjct: 273 DRGQRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAG--MGEHGS 330 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA+ +VL + ++ NDPIA+ VR I+DGH++L+R +A + +YP +D LAS+SR+ + + Sbjct: 331 ITALYTVLAEDESGNDPIAEEVRGIVDGHMILSREIAAKNQYPAIDVLASLSRVMPQVMT 390 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 D + L L+ + E + IG Y+PG + + D+A+ ++ I F Q+ +L++ Sbjct: 391 PDYVRAAGRLRELLAKHREVEMLLQIGEYQPGGNPLADEAIRKIDAIRAFFNQATHELAA 450 >gi|229918630|ref|YP_002887276.1| ATPase, FliI/YscN family [Exiguobacterium sp. AT1b] gi|229470059|gb|ACQ71831.1| ATPase, FliI/YscN family [Exiguobacterium sp. AT1b] Length = 439 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 154/363 (42%), Positives = 229/363 (63%), Gaps = 8/363 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ N + V + P G +I+ G LV G+ P G+V++ LG+P+ G+ + Sbjct: 60 EVVGFNEERVLLMPYGETTQIAPGCLVKGTGKMLQVPVGEELIGQVLDGLGRPLSGERLV 119 Query: 120 -GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 GK ++ K P +NR R+ TG+R+ID + GQR+G+FAGSG+GKSTLL Sbjct: 120 TGK---RYDVQRKPPNPLNRPRILDALSTGVRMIDGLLTVGKGQRVGLFAGSGVGKSTLL 176 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 M A+ D +I+L+GERGREV+EFIE LG + + +SVV+VATSD+ P++R T Sbjct: 177 GMIAKRSSADINVIALIGERGREVKEFIEKELGPEGMARSVVIVATSDQPPLVRLKGAYT 236 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G V+L++DS+TRFA + REI +GE P ++GY SVF+ LP+LLER Sbjct: 237 ATAIAEYFRDQGKEVVLMMDSVTRFAMAQREIGLATGEPPTSKGYTPSVFAMLPQLLERS 296 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G + G+ITA +VLVDGD+ N+PIAD+VR ILDGH V++R+LA G++P + L S+ Sbjct: 297 GTAAT--GSITAFYTVLVDGDDMNEPIADAVRGILDGHFVMDRALANRGQFPAIHVLKSI 354 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ ++ S + K+ + + + + D+ IG Y+ G + +D AV + P + FL Sbjct: 355 SRVMNQIASPEHKEAAQTFRSWLATYIDAEDLINIGAYKKGTNPAIDTAVDKYPYLLTFL 414 Query: 418 KQS 420 KQS Sbjct: 415 KQS 417 >gi|296330838|ref|ZP_06873313.1| flagellum-specific ATP synthase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674356|ref|YP_003866028.1| flagellum-specific ATP synthase [Bacillus subtilis subsp. spizizenii str. W23] gi|296151843|gb|EFG92717.1| flagellum-specific ATP synthase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412600|gb|ADM37719.1| flagellum-specific ATP synthase [Bacillus subtilis subsp. spizizenii str. W23] Length = 438 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 162/380 (42%), Positives = 229/380 (60%), Gaps = 9/380 (2%) Query: 43 VCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100 VCL + +G++ + + +V+ + + + P I+ G +V G R+ A Sbjct: 42 VCL---IYAKGQSGNVIKAEVVGFQEESILLMPYLEAASIAPGSIVEATGESLRVKVGAG 98 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G+VI+A G+P+DG L KG + P M R + + G+R ID + Sbjct: 99 LIGQVIDAFGEPLDGK-LLPKGLSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGK 157 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQRIG+FAGSG+GKSTL+ M A+ D +I+LVGERGREVREFIE LGD LK+S+V Sbjct: 158 GQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGERGREVREFIEKDLGDEGLKRSIV 217 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD+ ++R A TA IAEYF KG NV+ ++DS+TR A + REI +GE P Sbjct: 218 VVATSDQPALMRLKAAYTATAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTT 277 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GY SVF+ LPRLLER G +E G ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+ Sbjct: 278 KGYTPSVFAILPRLLERTGANEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLD 335 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA +G++P V+ L S+SR+ + + L+ ++ + D+ IG Y+ G Sbjct: 336 RALANKGQFPAVNILKSISRVMSNISTRQHLDAANKFRELLSTYQNSEDLINIGAYKRGS 395 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 +D+A+ P + FLKQ Sbjct: 396 SREIDEAIQFYPQLIQFLKQ 415 >gi|254474795|ref|ZP_05088181.1| flagellum-specific ATP synthase [Ruegeria sp. R11] gi|214029038|gb|EEB69873.1| flagellum-specific ATP synthase [Ruegeria sp. R11] Length = 447 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 164/425 (38%), Positives = 251/425 (59%), Gaps = 4/425 (0%) Query: 2 QKNLETLAQLAEDYS-KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL- 59 Q + + L +D + K L G ++ I+ V+ L +GD +V + D L Sbjct: 4 QNMISAINALTQDLANKRLSAAVGRVTEISGGAIAVSGLDGQARIGDRLVLRRGGKDPLQ 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 G+V+RI+ + + P + +++GD V +P+ W GRVI+ G P+DG + Sbjct: 64 GEVMRISGREISMLPDTAPDRVAVGDPVLLHPTPEFAPADSWIGRVIDPFGAPLDGRPMM 123 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 +G+ + ++M+ P A R+ + + TG+ V + P+ GQR+G+FAGSG+GKSTLL+ Sbjct: 124 -RGETARDLMAAPPKAAERRPMGERLATGLAVFNTILPIVKGQRVGLFAGSGVGKSTLLA 182 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 A++ D V+++L+GERGREV F+ + LG D +K++VVV ATSD+S ++R+ +A Sbjct: 183 TLAQNMEADVVVMALIGERGREVNHFVNEVLGPDGMKRAVVVAATSDQSALVRRRCAWSA 242 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 + +AE+F +G NVL + DS+TRFA + REIA SGE P RGYP SV + L ER G Sbjct: 243 MAVAEHFRDQGKNVLFLADSVTRFAEAHREIAVASGEAPALRGYPPSVTPLITGLCERAG 302 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P +G+ITAV SVLV G + ++PIAD +R +LDGHIVLNR +AE GR+P VD SVS Sbjct: 303 PGSDGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLNREIAERGRFPAVDVSRSVS 362 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R A + +E + + + +E++ + G Y G D+ LD+AV P + F Sbjct: 363 RSLPAAATEEENAAILDVRKYLGAYEQSEVMIRAGLYSEGNDVTLDQAVKLWPELDSFFG 422 Query: 419 QSPSD 423 +S D Sbjct: 423 KSDPD 427 >gi|225375320|ref|ZP_03752541.1| hypothetical protein ROSEINA2194_00945 [Roseburia inulinivorans DSM 16841] gi|225212809|gb|EEG95163.1| hypothetical protein ROSEINA2194_00945 [Roseburia inulinivorans DSM 16841] Length = 436 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 150/343 (43%), Positives = 224/343 (65%), Gaps = 6/343 (1%) Query: 79 EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 E I +G +V + G +S G ++ +G+P D D + + ++ P M+ Sbjct: 77 EGIGVGCIVENTGHPLSVSVGNELLGHTLDGIGRPTDIDKL--ETPYEYPVDAQPPDPMS 134 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ + + G++ +D + GQRIG+FAGSG+GKSTLL MFAR+ D +I+L+GE Sbjct: 135 RKIISEVLPLGVKAVDGLITVGKGQRIGIFAGSGVGKSTLLGMFARNTKADINVIALIGE 194 Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREVREF+E LG+ +K+S+VVVATSD+ ++RK A +TA +IAEYF +G +VLL++ Sbjct: 195 RGREVREFVERDLGEEGMKRSIVVVATSDKPALIRKKAAMTATSIAEYFRDQGKDVLLMM 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TRF+ + REI SGE PV RGYP SV+SE+P+LLER G S +KG+IT + +VLVD Sbjct: 255 DSLTRFSMAQREIGLASGEPPVTRGYPPSVYSEMPKLLERAGTS--DKGSITGLYTVLVD 312 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 GD+ N+PI D+ RSILDGHI+L+R L + YP +D L S+SR+ + + K+L L Sbjct: 313 GDDFNEPITDTARSILDGHIMLSRKLGHKNHYPAIDILQSISRVMSSIATPEHKELAGRL 372 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +++ + E D+ IG Y+ G + +D A+ ++ + DFL Q Sbjct: 373 KNVLATYNEAEDLINIGAYKSGSNRNIDYAIQKIDAVNDFLMQ 415 >gi|160939663|ref|ZP_02087011.1| hypothetical protein CLOBOL_04555 [Clostridium bolteae ATCC BAA-613] gi|158437454|gb|EDP15218.1| hypothetical protein CLOBOL_04555 [Clostridium bolteae ATCC BAA-613] Length = 434 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 175/420 (41%), Positives = 253/420 (60%), Gaps = 18/420 (4%) Query: 25 YISSITSVYYTVTCLSQYVC-LGDF----VVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79 Y+ I + T + C LGD VV G S + +V+ + V + P G E Sbjct: 18 YLGKIDKIVGTTVESTGPACRLGDVCTIDVVEGG--SPVMAEVVGFRENKVLLMPYGETE 75 Query: 80 EISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPP-AM 136 I G V + G R I+ S GR ++A+G PID LG D+S ++ P M Sbjct: 76 GIGYGSAVRNTGERLHIAVSNHLIGRTVDAMGNPID---DLGPVEDVSYYSITGRPSNPM 132 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R R++ + G++ ID + GQR+G+FAGSG+GKSTL+ M A++ D +I+LVG Sbjct: 133 TRPRIDTIIQMGVKAIDGLMTVGKGQRMGIFAGSGVGKSTLMGMIAKNVKADVNVIALVG 192 Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ER REV EFI LG+ L++SV+VVATS++S ++R +TA TIAEYF +G +VLL+ Sbjct: 193 ERSREVVEFIHRDLGEEGLRRSVLVVATSNQSAMMRSKCTMTATTIAEYFKDQGMDVLLM 252 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + RE+ + GE PVARGY S++SELP+LLER G E+G+IT + +VLV Sbjct: 253 MDSLTRFAMAQREVGLSIGEPPVARGYTPSIYSELPKLLERSG--NFEEGSITGIYTVLV 310 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 +GD+ N+PI+D+VR I+DGHI+L+R +A YP +D L+SVSRL + + + K Sbjct: 311 EGDDANEPISDTVRGIIDGHIMLSRKVAARNHYPAIDILSSVSRLMNDIVTPEHKAAAGK 370 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS--EDVFQEI 433 L L+ +E RD+ IG Y+ G + LD A+ ++ IY FL+Q + S E V Q I Sbjct: 371 LRRLLSVYESNRDLVSIGAYKKGTNPELDDALERIDRIYGFLQQKTDESFSLDESVIQMI 430 >gi|89072274|ref|ZP_01158853.1| putative flagellum-specific ATP synthase [Photobacterium sp. SKA34] gi|89051806|gb|EAR57258.1| putative flagellum-specific ATP synthase [Photobacterium sp. SKA34] Length = 449 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 153/362 (42%), Positives = 223/362 (61%), Gaps = 5/362 (1%) Query: 61 QVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 QV+ + +I Y+ PV +G + ++ G ++ S W GRV+N LG+P+D L Sbjct: 61 QVVGFDHNIAYLMPVRQLGGLYAGAKVIPIQGGSTVNVSHKWIGRVVNGLGEPLDNGLPL 120 Query: 120 GKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 G+ LS+E P M RQ VE GI+ I+ + GQRIG+ AGSG+GKS L+ Sbjct: 121 QGGECLSLEPKPINP--MKRQPVESPLDVGIKAINGLLTVGKGQRIGLMAGSGVGKSVLM 178 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237 M + D +++ L+GERGREVREFIE LG+ K++V++ A +DESP++R A Sbjct: 179 GMITKYTAADIIVVGLIGERGREVREFIERSLGEEGRKRAVIIAAPADESPLMRLRATKL 238 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 +AEYF +G +VLL++DS+TR+A + REIA GE P +RGYP SVFS LP+LLER Sbjct: 239 CHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSLLPQLLERA 298 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G++TA+ +VL +GD+ DP+ DS R+ILDGHIVL+R+LAE+G YP +D AS+ Sbjct: 299 GNGENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHIVLSRTLAEQGHYPAIDINASI 358 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR + + L +++ +++ +GGY+ G D LD+AV P + FL Sbjct: 359 SRCMSNCTEQAHVTVANQFRQLNANYQQVKELLPLGGYQQGQDPELDQAVMMQPQLKQFL 418 Query: 418 KQ 419 +Q Sbjct: 419 QQ 420 >gi|188586020|ref|YP_001917565.1| type III secretion system ATPase, FliI/YscN [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350707|gb|ACB84977.1| type III secretion system ATPase, FliI/YscN [Natranaerobius thermophilus JW/NM-WN-LF] Length = 439 Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 162/438 (36%), Positives = 260/438 (59%), Gaps = 13/438 (2%) Query: 4 NLETLAQLAEDYSKNLVVQGGYISSITSVY-YTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62 +L+ L+Q + S L +QG +T V TV +GD + + + + +V Sbjct: 7 DLDKLSQTIRN-SNTLPLQG----EVTRVVGLTVEARGPGAKIGDLCLIRSDDQEIECEV 61 Query: 63 IRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK 121 + N + + P+G ++ G+ ++ + GRV++ LG+P+DG L Sbjct: 62 VGFNDGKILLMPLGNLNNVAPGNKVITSRENLSVPVGPGLVGRVLDGLGRPMDGKGPLTN 121 Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 + + P ++R R++K +TGI+ ID + GQR+G+F+GSG+GKSTLL M Sbjct: 122 TKCRYPMENTPPAPLDRSRIQKPIQTGIKAIDGVLTIGKGQRMGIFSGSGVGKSTLLGMI 181 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240 AR+ +I L+GERGREVREFIE LG + L++SV+VVATSD+ +LR +TA Sbjct: 182 ARNTSASVNVIGLIGERGREVREFIEKDLGEEGLQRSVIVVATSDQPALLRIKGAMTATA 241 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 IAEYF G++V+L++DS+TRFA + RE+ +GE P RG+P SVF+ LP+LLER G S Sbjct: 242 IAEYFRDCGNDVMLMMDSVTRFATAKREVGLATGEPPATRGFPPSVFAMLPQLLERSGTS 301 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 +KG++T + +VLVDGD+ ++P++D+VR +LDGHIVL+R LA + YP +D L S+SR+ Sbjct: 302 --DKGSVTGLYTVLVDGDDMDEPVSDTVRGVLDGHIVLSRKLAMQNHYPAIDILQSISRV 359 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +K + ++ + +EE RD+ IG Y+ G + +D A+ + + +FL+Q Sbjct: 360 MVDITDTQHQKAAAKISSALAAYEEARDLIEIGAYKKGSNPKVDWAMELIDDLNEFLRQ- 418 Query: 421 PSDLSSEDVFQEITKKLQ 438 +++ + E KL+ Sbjct: 419 --EITEKTTLDETINKLK 434 >gi|229544396|ref|ZP_04433454.1| ATPase, FliI/YscN family [Bacillus coagulans 36D1] gi|229324881|gb|EEN90558.1| ATPase, FliI/YscN family [Bacillus coagulans 36D1] Length = 441 Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 159/353 (45%), Positives = 217/353 (61%), Gaps = 5/353 (1%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P +EIS G LV G+ R+ G+VI+ LG P+D L G + I Sbjct: 68 VILMPYTNIQEISPGSLVEATGKPMRVKAGPRLLGKVIDPLGVPLD-HSPLPAGLKPIPI 126 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 P + R + + + G+R ID + GQRIG+FAGSG+GKSTLL M AR+ D Sbjct: 127 DRTPPNPLKRPPIREPIELGVRAIDSLLTVGKGQRIGIFAGSGVGKSTLLGMIARNTNAD 186 Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+L+GERGREVREFIE LG + LKKS+VVVATSD+ ++R TA IAEYF Sbjct: 187 LNVIALIGERGREVREFIEQDLGPEGLKKSIVVVATSDQPALMRIKGAYTATAIAEYFRD 246 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G NV+ ++DS+TR A + RE+ +GE P +GY SVF+ LP+LLER G E G I Sbjct: 247 QGLNVMFMMDSVTRVAMAQREVGLATGEPPATKGYTPSVFAILPKLLERTG--TNESGTI 304 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T + +VLVDGD+ N+PIAD+VR ILDGH VL+R LA +G+YP ++ L SVSRL + S Sbjct: 305 TGIYTVLVDGDDLNEPIADTVRGILDGHFVLDRDLANKGQYPAINILKSVSRLMSQLASP 364 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 KK + + + + D+ IG Y+PG +D+A+ + P I F+KQS Sbjct: 365 AHKKAAEKIREQLSTYLNSEDLINIGAYKPGASKEIDEAIERYPKIVSFIKQS 417 >gi|327478790|gb|AEA82100.1| FliI/YscN family ATPase [Pseudomonas stutzeri DSM 4166] Length = 444 Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 161/375 (42%), Positives = 219/375 (58%), Gaps = 9/375 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVI 106 V QG S QV+ N DI Y+ P ++ G VF + I S W GRV+ Sbjct: 51 VEQGDGSMLEAQVVGFNRDITYLMPFKKPVGLTAGSRVFPAPDDAKLHIDES--WLGRVV 108 Query: 107 NALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165 N LG+P+D LG D L E+ S P + R+ V + G+R I+ L GQR+G Sbjct: 109 NGLGEPLDELGKLGGRDPLPTELPSVNP--LKRKPVSEALDVGVRAINATLTLGKGQRVG 166 Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATS 224 +FAGSG+GKS LL M R D V++ L+GERGREV+EF+ LG+ LKK+VVVVA + Sbjct: 167 LFAGSGVGKSVLLGMITRQTKADVVVVGLIGERGREVQEFLLHSLGEEGLKKAVVVVAPA 226 Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 +ESP++R A +IA YF +G +VLL++DS+TR+A + REIA GE P +GYP Sbjct: 227 NESPLMRLKATELCHSIAAYFRDQGHDVLLLVDSLTRYAMAQREIALALGEPPATKGYPP 286 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 SVF LP L+E G + G+++A+ +VL +GD+ DPI D R+ILDGHIVL+R LAE Sbjct: 287 SVFGMLPELVESAGNGASDNGSLSAIYTVLAEGDDQQDPIVDCARAILDGHIVLSRRLAE 346 Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404 G YP +D ASVSR + L FE+ +++ +GGY PG D+ D Sbjct: 347 AGHYPAIDVCASVSRCMSQVGQPAHLGAARQLKECYSTFEKIKELIPLGGYTPGADIKTD 406 Query: 405 KAVHQVPIIYDFLKQ 419 +AV P I FL+Q Sbjct: 407 RAVQLAPTIERFLRQ 421 >gi|237752940|ref|ZP_04583420.1| flagellum-specific ATP synthase [Helicobacter winghamensis ATCC BAA-430] gi|229375207|gb|EEO25298.1| flagellum-specific ATP synthase [Helicobacter winghamensis ATCC BAA-430] Length = 432 Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 159/394 (40%), Positives = 237/394 (60%), Gaps = 6/394 (1%) Query: 45 LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCG 103 +GD V +++ ++G V + D I P E +GD V+ R +I G Sbjct: 39 IGDIVRILSEDNQSMGMVTALEKDCFKITPFSFIEGTKVGDKVYLNTRGLQIPVGLEILG 98 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 RVIN LG+ IDG ++ + +M I+ AM R + + F G++ ID GQ+ Sbjct: 99 RVINPLGEAIDGKGAI-RAQGAMPIIRAPIEAMKRGMINEVFSVGVKSIDGLLTCGKGQK 157 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVAT 223 +G+FAGSG+GKSTL+ M R +I+L+GERGREV EF+E LG +L +V++VAT Sbjct: 158 LGIFAGSGVGKSTLMGMIVRGATAKIKVIALIGERGREVPEFVEKNLGGDLTNTVLIVAT 217 Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 SD+SP++RK A+++AEYF +KG++VL ++DS+TRFA + REI GE P ++GYP Sbjct: 218 SDDSPLMRKYGAFAAMSVAEYFKAKGEDVLFMMDSVTRFAMAQREIGLALGEPPTSKGYP 277 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 SV + LP+L+ER G E+ +G+ITA +VLV+GD+ +DPIAD RSILDGHIVL+RSL Sbjct: 278 PSVLTLLPQLMERAG-KEEGQGSITAYFTVLVEGDDMSDPIADQSRSILDGHIVLDRSLT 336 Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403 + G YPP++ L S SRL + + + L +E + IG Y+ G D L Sbjct: 337 DFGIYPPINVLNSASRLMGDVANKEHIEAARKFRRLYAMLKENEVLIRIGAYQAGSDKDL 396 Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D+A+ + ++ ++LKQ D ++E +KL Sbjct: 397 DEAISKKGVMEEYLKQ---DCDVAITYEESVQKL 427 >gi|194015095|ref|ZP_03053712.1| flagellar protein export ATPase FliI [Bacillus pumilus ATCC 7061] gi|194014121|gb|EDW23686.1| flagellar protein export ATPase FliI [Bacillus pumilus ATCC 7061] Length = 438 Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 162/380 (42%), Positives = 229/380 (60%), Gaps = 9/380 (2%) Query: 43 VCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100 VCL + +G+ D + +V+ + + + P IS G LV G ++ Sbjct: 42 VCL---IHKKGRKHDPIKAEVVGFRDENILLMPYVEASNISPGSLVEATGESLKVKVGTG 98 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G V++A G+P+DG L KG + P M+R + + G+RVID + Sbjct: 99 LIGEVVDAFGEPLDGS-MLPKGLAPVSTDQSPPNPMDRPPIREKMGVGVRVIDSLLTVGT 157 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQRIG+FAGSG+GKSTL+ M A+ D +I+LVGERGREVREFIE LG + LK+S+V Sbjct: 158 GQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGERGREVREFIEKDLGTEGLKRSIV 217 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD+ + R A TA IAEYF +G NV+ ++DS+TR A + REI +GE P Sbjct: 218 VVATSDQPALTRMKAAYTATAIAEYFRDRGKNVMFMMDSVTRVAMAQREIGLATGEPPTT 277 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GY SVF+ LP+LLER G ++ G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+ Sbjct: 278 KGYTPSVFAILPKLLERTGTNQL--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLD 335 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA +G++P V+ L S+SR+ S D K+ + L+ ++ D+ IG Y+ G Sbjct: 336 RALANKGQFPAVNILKSISRVMSNIASHDHKEAANRFRQLLSTYQNAEDLINIGAYKKGS 395 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 +D A+ P + FLKQ Sbjct: 396 SKDIDDAMQAYPHLISFLKQ 415 >gi|56695106|ref|YP_165453.1| H+-transporting two-sector ATPase, flagellum-specific [Ruegeria pomeroyi DSS-3] gi|56676843|gb|AAV93509.1| H+-transporting two-sector ATPase, flagellum-specific [Ruegeria pomeroyi DSS-3] Length = 445 Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 160/416 (38%), Positives = 246/416 (59%), Gaps = 3/416 (0%) Query: 6 ETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIR 64 + LA AE S +LV G ++ + + L++ +GD V + +LG +V++ Sbjct: 5 DPLALKAEFDSLSLVRHVGRVTGVAGGVIQIQGLARQAQIGDRVELKRNFGPSLGGEVLQ 64 Query: 65 INLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124 + + + P E +SLG+ V +P W GRV++ G+P+DG L +G Sbjct: 65 VEGSTINMLPDSAPEGVSLGNRVVLHPIPGFAPGRHWLGRVVDPFGRPLDGR-PLMRGSK 123 Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 + ++M PPA+ R+ + + TG+ ++ P+ GQR+G+FAGSG+GKS+LL+ A+S Sbjct: 124 ARDLMRAPPPAVQRKPLGQRMATGLAALNTLLPIVRGQRVGLFAGSGVGKSSLLATLAKS 183 Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D V+++L+GERGREV EF+ LG + L +SV+V ATSD+S ++R+ A+T+AE Sbjct: 184 MQADAVVVALIGERGREVNEFVAKALGPEGLARSVIVAATSDQSALVRRRCAWAAMTVAE 243 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 +G NVL + DSITRFA + REI+ GE P RGYP SV + L ER GP ++ Sbjct: 244 SLRDEGLNVLYLADSITRFAEAHREISAAMGEAPALRGYPPSVTPLITGLCERAGPGTEK 303 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 +G+IT V SVLV G + ++P+AD +R +LDGHIVLNR +AE GR+P +D SVSR Sbjct: 304 QGDITGVFSVLVAGSDMDEPVADILRGVLDGHIVLNREIAERGRFPAIDISRSVSRSLPD 363 Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 A + ++ L+ LI +E++ + G Y G D +LD+AV P + FL + Sbjct: 364 AATPEQNALIGEARRLIGAYEQSEVMIKAGLYSEGADPLLDQAVRVWPELDAFLAR 419 >gi|157692303|ref|YP_001486765.1| flagellum-specific ATP synthase [Bacillus pumilus SAFR-032] gi|157681061|gb|ABV62205.1| flagellum-specific ATP synthase [Bacillus pumilus SAFR-032] Length = 438 Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 162/380 (42%), Positives = 229/380 (60%), Gaps = 9/380 (2%) Query: 43 VCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100 VCL + +G+ D + +V+ + + + P IS G LV G ++ Sbjct: 42 VCL---IHKKGRKHDPIKAEVVGFRDEHILLMPYVEASNISPGSLVEATGESLKVKVGTG 98 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G V++A G+P+DG L KG + P M+R + + G+RVID + Sbjct: 99 LIGEVVDAFGEPLDGS-MLPKGLAPVSTDQSPPNPMDRPPIREKMGVGVRVIDSLLTVGT 157 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQRIG+FAGSG+GKSTL+ M A+ D +I+LVGERGREVREFIE LG + LK+S+V Sbjct: 158 GQRIGIFAGSGVGKSTLMGMIAKQTEADLNVIALVGERGREVREFIEKDLGTEGLKRSIV 217 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD+ + R A TA IAEYF +G NV+ ++DS+TR A + REI +GE P Sbjct: 218 VVATSDQPALTRMKAAYTATAIAEYFRDRGKNVMFMMDSVTRVAMAQREIGLATGEPPTT 277 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GY SVF+ LP+LLER G ++ G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+ Sbjct: 278 KGYTPSVFAILPKLLERTGTNQL--GSITAFYTVLVDGDDMNEPIADTVRGILDGHIVLD 335 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA +G++P V+ L S+SR+ S D K+ + L+ ++ D+ IG Y+ G Sbjct: 336 RALANKGQFPAVNILKSISRVMSNIASHDHKEAANRFRQLLSTYQNAEDLINIGAYKKGS 395 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 +D A+ P + FLKQ Sbjct: 396 SKDIDDAMQAYPHLISFLKQ 415 >gi|291288213|ref|YP_003505029.1| flagellar protein export ATPase FliI [Denitrovibrio acetiphilus DSM 12809] gi|290885373|gb|ADD69073.1| flagellar protein export ATPase FliI [Denitrovibrio acetiphilus DSM 12809] Length = 435 Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 162/382 (42%), Positives = 233/382 (60%), Gaps = 9/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFH--WGRFRISPSACWCGRVINALGKPIDGD 116 L +++ D + + P G E I+ G V + +G + S GRV++ LG P+DG Sbjct: 54 LAEIVGFKDDRIILMPYGESEGIAPGSHVTNESYGN-TVKVSDSLLGRVLDGLGNPMDGK 112 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + +L + + P A+ R+ ++ TGI+ ID + GQR+G+FAGSG+GKS Sbjct: 113 GPITDFEL-VNVYQSPPQALEREIIKTPVSTGIKAIDNLITIGRGQRVGIFAGSGVGKSV 171 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAP 235 L M AR D +I+L+GERGREVREFIE LG+ LK+SV+V+ATSD+S ++RK+ Sbjct: 172 TLGMIARDSDADVNVIALIGERGREVREFIERDLGEEGLKRSVLVIATSDQSALIRKLGA 231 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 IAEYF SKG NV+L++DS+TRFA + REI GE P +GY SVF LP+LLE Sbjct: 232 FVGTAIAEYFRSKGLNVMLMMDSVTRFAMAQREIGLTVGEPPTTKGYTPSVFGLLPKLLE 291 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G ++K KGNIT + +VLV+ D+ NDPI DSVRSI+DGHIVL+R LA + YP +D L+ Sbjct: 292 RAG-TQKGKGNITGLYTVLVEADDMNDPIGDSVRSIIDGHIVLSRGLAAKNHYPAIDVLS 350 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S SRL + + + + L+ + E D+ IG Y G + +D+++ ++ I Sbjct: 351 SASRLMKEIVNDKQYANAGRMRDLLASYNEAEDLINIGAYVKGSNPKIDESIAKIGQIEQ 410 Query: 416 FLKQSPSDLSSEDVFQEITKKL 437 FL+Q D + F+E TK L Sbjct: 411 FLRQGIDDSIN---FEESTKLL 429 >gi|256833238|ref|YP_003161965.1| ATPase, FliI/YscN family [Jonesia denitrificans DSM 20603] gi|256686769|gb|ACV09662.1| ATPase, FliI/YscN family [Jonesia denitrificans DSM 20603] Length = 446 Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 159/378 (42%), Positives = 226/378 (59%), Gaps = 5/378 (1%) Query: 44 CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD V + +V+ ++ P+ + G V H G R+ + Sbjct: 41 AVGDVVAVGESGTPARAEVVAVHDGFATCMPLTAIPALRAGAQVRHTGGGIRVPVGSGLL 100 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ LG+PIDG L D +++ + P + RQRV + G+RV+D T + GQ Sbjct: 101 GRVIDPLGEPIDGLGPLTHVDF-VDVDAAAPHPLARQRVSEPLALGVRVMDTLTSVGRGQ 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKSTLLSM AR +I+L+GERGREVREF+ED LG + L +S+VV+ Sbjct: 160 RMGLFAGSGVGKSTLLSMIARGTDAQVSVIALIGERGREVREFLEDDLGPEGLARSIVVI 219 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+ ++R+ A TA IA++ + G++V+L++DS+TR A + REI + GE P RG Sbjct: 220 ATSDQPALMRQRAAFTATRIAQWLAQMGNDVVLMMDSLTRVAMAQREIGLSVGEPPATRG 279 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP S FS L LLER G E+G +T + +VLVDGD+HN+PIAD+ RSILDGH+VL+R Sbjct: 280 YPPSTFSVLANLLERAG--SAEQGTVTGLYTVLVDGDDHNEPIADAARSILDGHVVLDRK 337 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA G YP +D LAS+SR+A K + +L + +D+ IG Y G + Sbjct: 338 LAVRGHYPAIDALASISRVASKVNDPANQAHADTLRRFMAAKAGVQDLIDIGAYAAGSNP 397 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A+ Q I FL Q Sbjct: 398 TVDAALAQAQDITSFLCQ 415 >gi|149912828|ref|ZP_01901362.1| flagellum-specific ATP synthase [Roseobacter sp. AzwK-3b] gi|149813234|gb|EDM73060.1| flagellum-specific ATP synthase [Roseobacter sp. AzwK-3b] Length = 474 Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 162/417 (38%), Positives = 245/417 (58%), Gaps = 4/417 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82 G +S+I S + LS+ LGD V +++ LG +V+R++ D+ + P + + Sbjct: 23 GRVSAIQSQLLGIAGLSRVAKLGDRVEIACRDAVILGGEVLRLDGDLANVMPDFPPDRVH 82 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 +GD V I PS W GR+++ G+P+DG L KG + + P A +R+ Sbjct: 83 IGDRVRIADSALIRPSDRWIGRIVDPFGQPLDGR-PLPKGATGSALRADPPSAASRRGFG 141 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 +TG+ + P+ GQRIG+FAGSG+GKSTLL+ R+ D V+ +L+GERGRE+ Sbjct: 142 PRLETGLAAFNTLLPIVRGQRIGLFAGSGVGKSTLLATLGRNTQADVVVFALIGERGREL 201 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 R FIE LG + + +SVVV ATSD+SP+ R+ TA+ +AEYF G VLL+ DSITR Sbjct: 202 RHFIETGLGPEGMLRSVVVAATSDQSPLARRRCAWTAMAVAEYFRDAGKQVLLMFDSITR 261 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + RE+A +GELP RG+P S + L ER GP + +ITA+ SVLV G + + Sbjct: 262 FAEAHREVAIAAGELPTMRGFPASTSHMIMSLCERAGPGAQGCADITALFSVLVAGSDLD 321 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +P+AD +R +LDGH+VL+R +AE GRYP +D L SVSR +A S E +++ L+ Sbjct: 322 EPVADILRGVLDGHVVLDRQIAERGRYPAIDLLRSVSRSLPQAASDAENQMILRARALLG 381 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + + + G Y G D LD+A+ P + FL ++ +S+++ F + L+ Sbjct: 382 AYARSETMLRAGLYNEGSDPELDQAIRAWPELDAFLSET-EPVSAQNSFDRLNLILR 437 >gi|332799176|ref|YP_004460675.1| flagellar protein export ATPase FliI [Tepidanaerobacter sp. Re1] gi|332696911|gb|AEE91368.1| flagellar protein export ATPase FliI [Tepidanaerobacter sp. Re1] Length = 442 Score = 283 bits (723), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 168/400 (42%), Positives = 244/400 (61%), Gaps = 9/400 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDF-VVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEI 81 G IS I V T+ LG+ ++ KN ++ +V+ +IV + P+G E++ Sbjct: 24 GRISKI--VGLTIESEGPPAELGEICIIKSPKNPKSIFSEVVGFRDEIVILMPLGDMEDL 81 Query: 82 SLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 G V G+ +P GRV++ LG PID L K L + + P + R Sbjct: 82 GPGWDVEATGKKMTTPVGDELLGRVLDGLGNPIDDKGPL-KAKLHYPVSNNPPNPVERPI 140 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 + + G+R ID GQR+G+FAGSG+GKSTLL M AR+ D +I+LVGERGR Sbjct: 141 ISEPLPVGVRAIDALLTCGIGQRLGIFAGSGVGKSTLLGMIARNTKADVNVIALVGERGR 200 Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 E+ FI LG+ +K+SV+VVATSD+ P++R A TA IAEYF +G NVLL++DSI Sbjct: 201 ELNSFITKDLGEEGVKRSVIVVATSDKPPLVRTRAAFTATAIAEYFRDQGANVLLMMDSI 260 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA + RE+ +GE PV RGY SV++ LP+LLER G S KG+IT + +VLVDGD+ Sbjct: 261 TRFAMAQREVGLAAGEPPVTRGYTPSVYATLPKLLERAGTS--AKGSITGIYTVLVDGDD 318 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 N+PI+D+VR ILDGHIVL+R LA + YP +D +AS+SRL + + + +KL + ++ Sbjct: 319 LNEPISDAVRGILDGHIVLSRELANKNHYPAIDVMASISRLMNDIVTPNHRKLAGRVKNI 378 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + ++E D+ IG Y G + +D+++ + I +FLKQ Sbjct: 379 LSVYKEAEDLINIGAYVKGNNPQIDESIKYIDKIENFLKQ 418 >gi|312126822|ref|YP_003991696.1| atpase, flii/yscn family [Caldicellulosiruptor hydrothermalis 108] gi|311776841|gb|ADQ06327.1| ATPase, FliI/YscN family [Caldicellulosiruptor hydrothermalis 108] Length = 431 Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 156/401 (38%), Positives = 241/401 (60%), Gaps = 13/401 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP----VGIGE 79 G+++ + + T+ V +G + ++ L +V+ + V + P VG+ Sbjct: 19 GFVNQVIGL--TIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGV-- 74 Query: 80 EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 ++ F + GR+++ LG+PIDG + K + + ++ P + R Sbjct: 75 -FPGCKVIAQDSMFEVKVGKELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLERP 132 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R++ GI+ ID + GQR+G+FAGSG+GKSTLL M AR+ D +++L+GERG Sbjct: 133 RIDTIMPLGIKAIDALLTIGKGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGERG 192 Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 RE++EF+E D + LK+SVVVVATSDES + R A A+ IAEYF +G +VL ++DS Sbjct: 193 RELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLMDS 252 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI GE PV+RGY SVFS +P+LLER G + ++G+ITA+ +VLVDGD Sbjct: 253 LTRFAMAQREIGLAVGEPPVSRGYTPSVFSVMPKLLERAG--KNKRGSITALFTVLVDGD 310 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + N+PI D+ R ILDGHIVL+R++A + YP +D LAS+SR+ + ++L + Sbjct: 311 DFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVEPSHRELANETKR 370 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 ++ + ET D+ IG Y G + +D+A+ VP I FL+Q Sbjct: 371 VLAVYRETEDLINIGAYTKGSNPEIDRAIELVPRINQFLRQ 411 >gi|288871077|ref|ZP_06410012.1| flagellar protein export ATPase FliI [Clostridium hathewayi DSM 13479] gi|288864877|gb|EFC97175.1| flagellar protein export ATPase FliI [Clostridium hathewayi DSM 13479] Length = 440 Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 171/422 (40%), Positives = 251/422 (59%), Gaps = 11/422 (2%) Query: 2 QKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNL 59 K +E++ Q ++ NL G I I V TV + +GD G + + Sbjct: 6 HKMIESVRQAVQN--ANLYTYLGKIDKI--VGTTVESMGPACRIGDVCTIDVPGGSPPVM 61 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118 +V+ + V + P E I G V + G R I S GR ++A+G PIDG Sbjct: 62 AEVVGFRENRVLLMPYEETEGIGYGSTVRNTGERLLIPVSNELIGRTVDAMGMPIDGQGP 121 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 LG+ I K M R R++ + G++ ID + GQR+G+FAGSG+GKSTL+ Sbjct: 122 LGEVAY-YPITGKRSNPMERPRIDTVIQMGVKAIDGLLTIGKGQRMGIFAGSGVGKSTLM 180 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237 M A++ D +I+LVGER REV EFI LG+ LK+SV+VVATS++S ++R +T Sbjct: 181 GMIAKNVKADVNVIALVGERSREVVEFINRDLGEEGLKRSVLVVATSNQSAMMRSKCTMT 240 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A TIAEYF +G +VLL++DS+TRFA + RE+ + GE PVARGY S++SELP+LLER Sbjct: 241 ATTIAEYFKDQGMDVLLMMDSLTRFAMAQREVGLSIGEPPVARGYTPSIYSELPKLLERS 300 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+IT + +VLV+GD+ N+P++D+VR I+DGHI+L+R +A + RYP +D L+SV Sbjct: 301 G--NFETGSITGIYTVLVEGDDANEPVSDTVRGIIDGHIMLSRKVATQNRYPAIDILSSV 358 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SRL + K+ + L+ +E D+ IG Y+ G + LD A+ ++ IY+FL Sbjct: 359 SRLMSDIVMPEHKEAAGKIRKLLSVYESNIDLVSIGAYKKGTNKELDDALMRIDKIYEFL 418 Query: 418 KQ 419 +Q Sbjct: 419 QQ 420 >gi|182412243|ref|YP_001817309.1| flagellar protein export ATPase FliI [Opitutus terrae PB90-1] gi|177839457|gb|ACB73709.1| flagellar protein export ATPase FliI [Opitutus terrae PB90-1] Length = 441 Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 160/343 (46%), Positives = 215/343 (62%), Gaps = 5/343 (1%) Query: 97 PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 P GRV++ALG+P DG L D S+ + P + RQR+ F+TG+R +D FT Sbjct: 101 PGPEMLGRVLDALGRPYDGLGML-PVDRSVGRDATPPHPLRRQRIHHSFQTGVRALDAFT 159 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215 P GQR+G+FAGSG+GKSTL+ M AR D V+++LVGERGREVREFIE LG + LK Sbjct: 160 PFGRGQRLGLFAGSGVGKSTLMGMIARGSEADVVVVALVGERGREVREFIEKDLGPEGLK 219 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 +++VVVATSD LR A TA IAE + ++G NVL ++DS+TRFA + REI GE Sbjct: 220 RAIVVVATSDTPAPLRLRAAFTATAIAEAWRAEGKNVLFMMDSVTRFAMAQREIGLAVGE 279 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 RGY SVF+ LPRLLER G E G ITA+ +VLV+GD+ N+P+AD+VR ILDGH Sbjct: 280 PAATRGYTPSVFALLPRLLERTGAG--ELGAITALYTVLVEGDDMNEPVADAVRGILDGH 337 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 +VL+R+LA YP +D L SVSRL + DE L + + + + D+ IG Y Sbjct: 338 VVLSRALAHFNHYPAIDVLESVSRLIRDVCTPDEVALAAKAREHLALYRKNEDLISIGAY 397 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437 + G + LD+A+ + FL+Q + + E FQ + K L Sbjct: 398 QKGANAALDRAIALHEPLRGFLRQPIEEHTPREQSFQLLKKIL 440 >gi|168180916|ref|ZP_02615580.1| flagellar protein export ATPase FliI [Clostridium botulinum NCTC 2916] gi|182668289|gb|EDT80268.1| flagellar protein export ATPase FliI [Clostridium botulinum NCTC 2916] Length = 438 Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 167/392 (42%), Positives = 238/392 (60%), Gaps = 9/392 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 +++ KN +V+ + V + P+G I+ G V G+ + S G+V++ Sbjct: 49 IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P++G++ + +++ S P M R+R++ TGI+ ID F + GQRIG+F Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKST L M A+ D +I+L+GERGREVR+FIE LG+ LKKSV+V ATSD+ Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R TA IAEYF +G V+L++DS+TRFA + REI GE P +GY SV Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F++LPRL+ER G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L+SVSRL + S + K L+ ++ + D+ IG Y G + +D A Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +H I FLKQ + + F+E T LQ Sbjct: 405 IHYHESILSFLKQG---IGEQHSFEESTSILQ 433 >gi|187778751|ref|ZP_02995224.1| hypothetical protein CLOSPO_02346 [Clostridium sporogenes ATCC 15579] gi|187772376|gb|EDU36178.1| hypothetical protein CLOSPO_02346 [Clostridium sporogenes ATCC 15579] Length = 436 Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 168/396 (42%), Positives = 239/396 (60%), Gaps = 17/396 (4%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-----G 103 +++ KN +V+ + V + P+G I+ G V G+ P + C G Sbjct: 47 IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCRVIPQGK----PLSVICSENILG 102 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 +V++ LGKP++G++ + +++ S P M R+R++ TGI+ ID F + GQR Sbjct: 103 KVLDGLGKPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFMTVGEGQR 160 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222 IG+FAGSG+GKST L M A+ D +I+L+GERGREVR+FIE LG+ LKKSV+V A Sbjct: 161 IGIFAGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCA 220 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+ ++R TA IAEYF +G V+L++DS+TRFA + REI GE P +GY Sbjct: 221 TSDKPALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGY 280 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 SVF++LPRL+ER G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RSL Sbjct: 281 TPSVFAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSL 338 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 A + YP +D L+SVSRL + + K L+ ++ + D+ IG Y G + Sbjct: 339 AAKNHYPAIDVLSSVSRLMSEIALKEHKDAAGMARDLLATYKNSEDLINIGAYAKGSNPK 398 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +D A+H I FLKQ + + F+E T LQ Sbjct: 399 VDMAIHYHEPILSFLKQG---IGEQHSFEESTSILQ 431 >gi|166714020|ref|ZP_02245227.1| type III secretion system ATPase [Xanthomonas oryzae pv. oryzicola BLS256] Length = 442 Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 158/367 (43%), Positives = 220/367 (59%), Gaps = 5/367 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELIGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + I ++ P M R+ +E TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 123 AC-DTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S Sbjct: 302 MGES--GSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + L L+ ++ E + +G YR G D + D+A+ ++ I DFL Sbjct: 360 RVMSQIVPSYHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 419 Query: 419 QSPSDLS 425 Q LS Sbjct: 420 QPTDQLS 426 >gi|153938471|ref|YP_001391960.1| flagellar protein export ATPase FliI [Clostridium botulinum F str. Langeland] gi|152934367|gb|ABS39865.1| flagellar protein export ATPase FliI [Clostridium botulinum F str. Langeland] gi|295319979|gb|ADG00357.1| flagellar protein export ATPase FliI [Clostridium botulinum F str. 230613] Length = 438 Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 167/392 (42%), Positives = 238/392 (60%), Gaps = 9/392 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 +++ KN +V+ + V + P+G I+ G V G+ + S G+V++ Sbjct: 49 IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P++G++ + +++ S P M R+R++ TGI+ ID F + GQRIG+F Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKST L M A+ D +I+L+GERGREVR+FIE LG+ LKKSV+V ATSD+ Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R TA IAEYF +G V+L++DS+TRFA + REI GE P +GY SV Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F++LPRL+ER G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L+SVSRL + S + K L+ ++ + D+ IG Y G + +D A Sbjct: 345 HYPAIDVLSSVSRLMSEIASKEHKDAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +H I FLKQ + + F+E T LQ Sbjct: 405 IHYHESILSFLKQG---IGEQHSFEESTSILQ 433 >gi|307725651|ref|YP_003908864.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia sp. CCGE1003] gi|307586176|gb|ADN59573.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia sp. CCGE1003] Length = 467 Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 158/388 (40%), Positives = 233/388 (60%), Gaps = 7/388 (1%) Query: 43 VCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA- 99 V LG+ + N L +VI D+ + P +IS V GR P Sbjct: 66 VTLGELCELRAANGALLQHAEVIGFTRDVALLSPFSRLADISRSTRVVGLGRSLTVPVGD 125 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRVI++LG+PIDG L + + + P M+R+ ++ TG+RV+D L Sbjct: 126 TLLGRVIDSLGEPIDGLGPL-EATEQRPVFANPPSPMSRRMIDTPLATGVRVVDGMMTLA 184 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FA +G+GKSTLL MFAR D +I+L+GERGREVREF+E LG + + +SV Sbjct: 185 EGQRMGIFAPAGVGKSTLLGMFARGAQCDVAVIALIGERGREVREFVELILGPEGMARSV 244 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV ATSD S I R A A IAE+F +G VLL++DS+TRFA + REI +GE P Sbjct: 245 VVCATSDRSSIERAKAAYVATAIAEHFRDRGQRVLLMMDSLTRFARAQREIGLAAGEPPA 304 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RG+P S+F+ELPRLLER G E G+ITA+ +VL + ++ NDPIA+ VR I+DGH++L Sbjct: 305 RRGFPPSIFAELPRLLERAG--MGEHGSITALYTVLAEDESGNDPIAEEVRGIVDGHMIL 362 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R +A + +YP +D LAS+SR+ + + + + + L L+ + E + IG Y+PG Sbjct: 363 SREIAAKNQYPAIDVLASLSRVMPQVMTPEYVRAAARLRELLAKHREVELLLQIGEYQPG 422 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + + D+A+ ++ I F Q+ +L++ Sbjct: 423 GNPLADEAIRKIDAIRAFFNQATHELAA 450 >gi|319795604|ref|YP_004157244.1| type III secretion apparatus h+-transporting two-sector atpase [Variovorax paradoxus EPS] gi|315598067|gb|ADU39133.1| type III secretion apparatus H+-transporting two-sector ATPase [Variovorax paradoxus EPS] Length = 457 Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 162/365 (44%), Positives = 219/365 (60%), Gaps = 5/365 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEIS-LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 L +V+ + + P+G IS L ++V G + GRV++A+G+PIDG Sbjct: 72 LAEVVGFRGNTAVLTPLGPITGISALTEVVPTGGGHSCPVGSQLLGRVLDAMGQPIDGRG 131 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L V P + R+ ++ TGIR ID L GQRIGVF+ G+GKSTL Sbjct: 132 GLAAAARQPVHREPVNP-LARRMIDAPLPTGIRAIDALLTLGEGQRIGVFSPPGVGKSTL 190 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 L M AR D +I+L+GERGREV+EFIE LG + + KSV+VV+TS+ P+ R + Sbjct: 191 LGMLARGSSADVNVIALIGERGREVKEFIEHSLGPEGMAKSVIVVSTSERPPMERIKSAH 250 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A TIAEYF +G VLL++DS++RFA + REI SGE P R YP S+FS LP+LLER Sbjct: 251 VATTIAEYFRDQGKKVLLLMDSLSRFARAQREIGLASGEPPTRRSYPPSIFSMLPQLLER 310 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + E G+ITA+ SVL +GD NDPIA+ VRSILDGH+VL+R LA RYP +D LAS Sbjct: 311 AG--QGESGSITAIYSVLTEGDEENDPIAEEVRSILDGHVVLSRKLAAANRYPAIDVLAS 368 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ + + L L+ +++E + IG Y+PG D D AV P I +F Sbjct: 369 ISRVMPLVTDPAHRAAAAHLRELLSKYQEMELLVQIGEYKPGGDAQADAAVRARPAILEF 428 Query: 417 LKQSP 421 L Q+P Sbjct: 429 LAQAP 433 >gi|302670721|ref|YP_003830681.1| flagellar protein export ATPase FliI [Butyrivibrio proteoclasticus B316] gi|302395194|gb|ADL34099.1| flagellar protein export ATPase FliI [Butyrivibrio proteoclasticus B316] Length = 452 Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 169/411 (41%), Positives = 242/411 (58%), Gaps = 25/411 (6%) Query: 45 LGDFVVHQGKNSDN-----------LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR- 92 LGD + K DN + +V+ + V + P I G +V + Sbjct: 43 LGDICLIYPKKKDNETMSDSKGRPAMAEVVGFKDNHVQLMPYENTSGIGNGSIVENTDSP 102 Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKG-----DLSMEIMSKVPPAMNRQRVEKGFKT 147 R++ G+ ++ LG+ IDG S GKG ++ + ++ P M R + + Sbjct: 103 LRVNVGEGLLGQTLDGLGR-IDGT-SYGKGVMLEDGVAYSVENQPPDPMTRDPISEVLSL 160 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G++ +D + GQRIG+FAGSG+GKSTLL MFAR+ D +I+L+GERGREVREFIE Sbjct: 161 GVKAVDGLLTVGKGQRIGIFAGSGVGKSTLLGMFARNTQADINVIALIGERGREVREFIE 220 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 LG+ +K+S+VV ATSD+ + R A TA +IAEYF KG +VLL++DS+TRF+ + Sbjct: 221 RDLGEEGMKRSIVVCATSDKPALERLKAAKTATSIAEYFRDKGKDVLLMMDSLTRFSMAQ 280 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REI SGE PV+RGYP SV++E+P+LLER G S K G+IT + +VLVDGD+ N+PI D Sbjct: 281 REIGLASGEPPVSRGYPPSVYAEMPKLLERAGRSRK--GSITGLYTVLVDGDDMNEPITD 338 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 + R ILDGHIVLNR LA++ YP +D LAS+SR + KK L +++ + + Sbjct: 339 TARGILDGHIVLNRKLAQKNHYPAIDVLASISRCMSAIADPEHKKAAGKLKNVLATYNDA 398 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D+ IG YR G + +D AV ++ + FL Q + S F+EI L Sbjct: 399 EDLINIGAYRSGANKNIDYAVSKIEQVNAFLTQETDEKFS---FEEIRDML 446 >gi|310659042|ref|YP_003936763.1| flagellum-specific ATP synthase [Clostridium sticklandii DSM 519] gi|308825820|emb|CBH21858.1| flagellum-specific ATP synthase [Clostridium sticklandii] Length = 436 Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 161/382 (42%), Positives = 236/382 (61%), Gaps = 8/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +V+ D V + P+G E I G +V G + GR+++ +G PID D Sbjct: 57 LAEVVGFKEDTVLLMPLGEMEGIGPGSMVVATGNTLEVDVGEQLLGRILDGMGNPID-DF 115 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + S + ++ P ++R ++ + G++ ID F GQRIG+FAGSG+GKSTL Sbjct: 116 EPPSLNYSYPVNNQPPNPLSRTKISEPLPLGVKAIDGFLTCGRGQRIGIFAGSGVGKSTL 175 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M AR+ D +I+L+GERGREV+EFI++ L + LKKSVV+V TSD+ P++R L Sbjct: 176 LGMIARNTLADINVIALIGERGREVKEFIDNDLEEEGLKKSVVIVVTSDQPPLVRMKGAL 235 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +IAEYF G NV+L++DS+TRF+ + RE+ GE PV +GY SVF+ LP+LLER Sbjct: 236 LATSIAEYFRDCGKNVVLMMDSLTRFSMAQREVGLAIGEPPVTKGYTPSVFAVLPKLLER 295 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S K G+IT + +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA + YP +D LAS Sbjct: 296 AGNSSK--GSITGLYTVLVDGDDMNEPIADAVRGILDGHIVLSRNLANKNHYPAIDILAS 353 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + +V + L+ + ++ D+ IG Y G + +D A+ ++ II +F Sbjct: 354 VSRVMPNIVDKEHIDIVGRIKDLMATYRDSEDLINIGAYIKGTNKKVDMAIEKIEIINEF 413 Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438 L+Q D + F EI + L+ Sbjct: 414 LRQGIHDRLT---FDEIVELLR 432 >gi|52080226|ref|YP_079017.1| flagellum-specific ATP synthase [Bacillus licheniformis ATCC 14580] gi|52785603|ref|YP_091432.1| flagellum-specific ATP synthase [Bacillus licheniformis ATCC 14580] gi|319645995|ref|ZP_08000225.1| FliI protein [Bacillus sp. BT1B_CT2] gi|52003437|gb|AAU23379.1| flagellar-specific ATP synthase [Bacillus licheniformis ATCC 14580] gi|52348105|gb|AAU40739.1| FliI [Bacillus licheniformis ATCC 14580] gi|317391745|gb|EFV72542.1| FliI protein [Bacillus sp. BT1B_CT2] Length = 437 Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 153/359 (42%), Positives = 219/359 (61%), Gaps = 5/359 (1%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 + + P I+ G +V G R+ + G+V++A G P+DG L KG + Sbjct: 66 ILLMPYLEAANIAPGSIVEATGESLRVKVGSGLIGQVVDAFGNPLDGS-VLPKGLAQVST 124 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 P M R + + G+R ID + GQR+G+FAGSG+GKSTL+ M AR D Sbjct: 125 DQAPPNPMKRPPIREKMAVGVRSIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARETAAD 184 Query: 189 KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+LVGERGREVREFIE LG+ LK+++VVVATSD+ ++R A TA IAEYF Sbjct: 185 LNVIALVGERGREVREFIEKDLGEEGLKRTIVVVATSDQPALMRLKAAYTATAIAEYFRD 244 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NV+ ++DS+TR A + REI +GE P +GY SVF+ LP+LLER G +E G+I Sbjct: 245 KGQNVMFMMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFAILPKLLERTGTTES--GSI 302 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+SR+ Sbjct: 303 TAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSISRVMSNIAEK 362 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 D + + ++ ++ + D+ IG Y+ G +D+A+ P + FLKQ + +S Sbjct: 363 DHIRAANRFREMLSTYQNSEDLINIGAYKKGSSREIDEAIQFHPKLISFLKQEVDEAAS 421 >gi|168183272|ref|ZP_02617936.1| flagellar protein export ATPase FliI [Clostridium botulinum Bf] gi|237796099|ref|YP_002863651.1| flagellar protein export ATPase FliI [Clostridium botulinum Ba4 str. 657] gi|182673660|gb|EDT85621.1| flagellar protein export ATPase FliI [Clostridium botulinum Bf] gi|229261134|gb|ACQ52167.1| flagellar protein export ATPase FliI [Clostridium botulinum Ba4 str. 657] Length = 438 Score = 282 bits (721), Expect = 8e-74, Method: Compositional matrix adjust. Identities = 167/392 (42%), Positives = 238/392 (60%), Gaps = 9/392 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 +++ KN +V+ + V + P+G I+ G V G+ + S G+V++ Sbjct: 49 IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P++G++ + +++ S P M R+R++ TGI+ ID F + GQRIG+F Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKST L M A+ D +I+L+GERGREVR+FIE LG+ LKKSV+V ATSD+ Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R TA IAEYF +G V+L++DS+TRFA + REI GE P +GY SV Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F++LPRL+ER G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L+SVSRL + S + K L+ ++ + D+ IG Y G + +D A Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKDAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +H I FLKQ + + F+E T LQ Sbjct: 405 IHYHESILSFLKQG---IGEQHSFEESTSILQ 433 >gi|148269842|ref|YP_001244302.1| flagellar protein export ATPase FliI [Thermotoga petrophila RKU-1] gi|147735386|gb|ABQ46726.1| type III secretion system ATPase, FliI/YscN [Thermotoga petrophila RKU-1] Length = 427 Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 165/390 (42%), Positives = 242/390 (62%), Gaps = 11/390 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108 + GKN+ L +V+ + V + P + + V + + S GRV + Sbjct: 38 LQNGKNA--LAEVVGFREESVILMPYEDVSGLKMSCEVIRTNKVLEVGVSRKMIGRVFDG 95 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG+PIDG + + + + P + R+R++ GIR ID + GQRIG+FA Sbjct: 96 LGRPIDGKPFVPED--RYPLTNNPPNPLKRRRIKDPLPVGIRSIDGLITVGKGQRIGIFA 153 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 GSG+GKSTLL M AR+ D +++L+GERGREVREFIE LG+ LK+S++VV+TSD+ Sbjct: 154 GSGVGKSTLLGMIARNTTADVNVLALIGERGREVREFIERDLGEEGLKRSILVVSTSDQP 213 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 + R + LTA +IAE+F G +VLL++DS+TR+A + RE+ GE P RGYP SVF Sbjct: 214 ALARVKSLLTATSIAEFFRDLGYDVLLMVDSLTRWAMAQREVGLAVGEPPTTRGYPPSVF 273 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + LP++LER G S+K G+ITA+ +VLV+ D+ N+PI+D+VRSI+DGHI+L+R LAE Sbjct: 274 AGLPKILERAGNSDK--GSITAIYTVLVEADDFNEPISDTVRSIVDGHIILSRRLAESNH 331 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YP VD LASVSRL + + + ++ + L L+ +E +D+ IG Y+ G + ++DKAV Sbjct: 332 YPAVDVLASVSRLMNDIVTEEHREAANRLRSLMSAYESAKDLIEIGAYKSGTNPLVDKAV 391 Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 I FLKQ + SS F+E +KL Sbjct: 392 EMKDEIDSFLKQGVFEKSS---FEETLQKL 418 >gi|304438475|ref|ZP_07398415.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368558|gb|EFM22243.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 458 Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 165/371 (44%), Positives = 230/371 (61%), Gaps = 10/371 (2%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS-LGKGDLSME 127 V + PVG + I G V GR R+ GRV++ LG PIDG L K + ++ Sbjct: 80 VLLMPVGEMQGIGPGCEVVATGRQLRVKVGMELLGRVLDGLGNPIDGKGPILAKEEYPLQ 139 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + PP + R R+ G+R ID + GQRIG+ AGSG+GKSTLLSM AR+ Sbjct: 140 --APPPPPLTRPRIHDNLYVGVRAIDGLITMGDGQRIGIMAGSGVGKSTLLSMIARNTEA 197 Query: 188 DKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+LVGERGREVR+FIE LG+ LK+SVVVVATSD+ ++R +T IAEYF Sbjct: 198 DISVITLVGERGREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEYFR 257 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G V+L++DS+TRFA + RE+ GE P RGY SVF+ LPRLLER G SEK G+ Sbjct: 258 DQGRKVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTSEK--GS 315 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R +A + +P +D L+SVSR+ + + Sbjct: 316 ITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLSSVSRVMYEVVA 375 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + + + L+ ++E D+ IG Y G +D A+ ++ I DFL Q +++S Sbjct: 376 KNHLEAAQEMRQLMAVYQEAEDLIHIGAYVKGSSPKIDAAIQKIDGINDFLCQGIYEVTS 435 Query: 427 EDVFQEITKKL 437 + E ++L Sbjct: 436 ---YAETEQQL 443 >gi|317407757|gb|EFV87684.1| BscN protein [Achromobacter xylosoxidans C54] Length = 455 Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 157/388 (40%), Positives = 232/388 (59%), Gaps = 10/388 (2%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACW 101 VCL + + G++ + G+V+ D + PVG IS V GR + P A Sbjct: 60 VCL---LRNPGEDFEMKGEVVGFVKDAALLTPVGDMHGISSSTEVIPTGRSHMVPVGAGL 116 Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ LG+P+D D LG + S + + P + R+ + + + G+R +D Sbjct: 117 LGRVLDGLGRPLDAD-RLGPLEASKFYPVFADAPDPLTRRIIHEPLELGVRALDGLLTCG 175 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FA +G GKSTL+ M + D +++L+GERGREVREF+E LG D ++SV Sbjct: 176 EGQRMGIFAAAGGGKSTLMGMLVKGAAVDVTVVALIGERGREVREFLEHELGEDGRRRSV 235 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V ATSD+S + R A A IAEYF +G VL ++DS+TRFA + REI +GE P Sbjct: 236 IVCATSDKSSMERAKAAYVATAIAEYFRDQGKKVLFLMDSVTRFARAQREIGLAAGEPPT 295 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGYP SVF+ LPRL+ER+G ++K G+ITA+ +VLV+GD+ +P+AD RSILDGHIVL Sbjct: 296 RRGYPPSVFATLPRLMERVGMNDK--GSITALYTVLVEGDDMTEPVADETRSILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LA YP +D LAS SR+ + + K + L+ +++E + IG Y+PG Sbjct: 354 SRKLAASNHYPAIDVLASASRVMNAVVRPEHKAAAGRIRELMAKYQEVELLVKIGEYKPG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426 D D+A+ ++ I FL+Q + S+ Sbjct: 414 GDAATDEALRKIDAIRGFLRQRTEERST 441 >gi|167750727|ref|ZP_02422854.1| hypothetical protein EUBSIR_01705 [Eubacterium siraeum DSM 15702] gi|167656406|gb|EDS00536.1| hypothetical protein EUBSIR_01705 [Eubacterium siraeum DSM 15702] gi|291532062|emb|CBK97647.1| type III secretion system ATPase, FliI/YscN [Eubacterium siraeum 70/3] gi|291558201|emb|CBL35318.1| type III secretion system ATPase, FliI/YscN [Eubacterium siraeum V10Sc8a] Length = 434 Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 158/380 (41%), Positives = 233/380 (61%), Gaps = 18/380 (4%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ N V + P E I G +V + G + + GR+I+ALG P+D + + Sbjct: 57 EVVGFNEHKVLLMPYTDLEGIGPGSIVDNTGDKLNVRVGDKLIGRIIDALGNPLDDGEPI 116 Query: 120 GKGDLSMEIMSKVPPA------MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 E VP A + R ++ + + G++ ID + GQR+G+FAGSG+G Sbjct: 117 -------EYTDTVPIAGIPVNPLTRPKIHEPIELGVKAIDGLLTMGKGQRMGIFAGSGVG 169 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRK 232 KSTL+ M AR D +I+LVGERGREVREFIE+ LG+ + +SVVVVATSD+ ++R Sbjct: 170 KSTLMGMIARKVKADLNVIALVGERGREVREFIENDLGEEGMARSVVVVATSDQPAMMRN 229 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 P+TA IAEYF S+G +VLL++D++TRFA + REI ++GE PVARGY S+++ +P+ Sbjct: 230 KCPMTATAIAEYFCSQGKDVLLMMDNLTRFAMAQREIGLSTGEPPVARGYTPSIYAAMPK 289 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G EKG+IT + +VLV+GD+ N+PI+D+VR I+DGHIVL+R +A + YP +D Sbjct: 290 LLERAG--NFEKGSITGIYAVLVEGDDTNEPISDTVRGIIDGHIVLSRKIAAQNHYPAID 347 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 L S+SRL + K L +L+ + D+ IG Y+ G + LD+A+ ++ Sbjct: 348 ILPSISRLMSAIADPEHNKAAGKLRNLLALYNNNADLISIGAYKKGTNPALDEAIKKIDK 407 Query: 413 IYDFLKQSPSD-LSSEDVFQ 431 I DFL Q + S ED + Sbjct: 408 INDFLMQGMYESFSMEDTIK 427 >gi|332559808|ref|ZP_08414130.1| FliI2 [Rhodobacter sphaeroides WS8N] gi|332277520|gb|EGJ22835.1| FliI2 [Rhodobacter sphaeroides WS8N] Length = 436 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 169/414 (40%), Positives = 244/414 (58%), Gaps = 2/414 (0%) Query: 11 LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70 LAE + L + G ++ I +V L Q LGD V G G+V+R++ V Sbjct: 9 LAEIAAIPLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSSHEV 68 Query: 71 YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 I P G E +++GD V G I+P W GR+++ LG+P+DG L +G + + + Sbjct: 69 AILPDGSPEGLAIGDAVALVGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PPA R+ + TG+ V D PL GQRIG+FAGSG+GKS+LL+ FARS D V Sbjct: 128 AAPPAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187 Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I LVGERGRE+REF E LG + ++VVV ATSD+SP++R+ A+ +AE+F +G Sbjct: 188 VIGLVGERGRELREFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VLL++DSITRFA + RE+A GE RG+P S + L ER GP + G+ITA Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGAEGTGDITA 307 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 V+SVLV G + +P+AD +R +LDGH+V++R +AE GR+P +D L SVSR +A S E Sbjct: 308 VLSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSVSRALPEAASMAE 367 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L++ L+ ++ + G Y G D ++D A+ P + FL + D Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDAPD 421 >gi|294500936|ref|YP_003564636.1| flagellum-specific ATP synthase [Bacillus megaterium QM B1551] gi|294350873|gb|ADE71202.1| flagellum-specific ATP synthase [Bacillus megaterium QM B1551] Length = 437 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 166/388 (42%), Positives = 239/388 (61%), Gaps = 9/388 (2%) Query: 44 CLGDF-VVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100 +GD +H + D + +V+ N + V + P I G LV + ++S Sbjct: 38 SIGDVCFIHLSERGDKIRAEVVGFNGEHVILMPYTSVRYIGPGCLVETTEKPLQVSVGKE 97 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLC 159 G+V+++LG P+DG + L + + PP + R +E+ + G+R ID + Sbjct: 98 LIGQVLDSLGNPLDGSEL--SHYLPFVLTDQDPPNPLERPPIEQPIEVGVRTIDSLLTVG 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218 GQRIG+FAGSG+GKSTLL M AR+ D +I+LVGERGREVREFIE LG+ LK+SV Sbjct: 156 QGQRIGIFAGSGVGKSTLLGMIARNTKADINVIALVGERGREVREFIERDLGEEGLKRSV 215 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VVVATSD+ +LR A TA +IAEYF +G +V++++DS+TR A + REI GE P Sbjct: 216 VVVATSDQPALLRMKAAYTATSIAEYFRDEGLSVMMMMDSVTRVAMAQREIGLAVGEPPT 275 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GY SVF+ LPRLLER G ++ G+ITA +VLVDGD+ N+PI+D+VR I+DGHIVL Sbjct: 276 TKGYTPSVFASLPRLLERTGTNQH--GSITAFYTVLVDGDDMNEPISDTVRGIIDGHIVL 333 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LA +G+YP ++ L SVSR+ + S K+ L L+ + + D+ IG Y+ G Sbjct: 334 DRELANKGQYPAINVLKSVSRVMNHIVSERHKEAAEKLRSLMATYANSEDLINIGAYKRG 393 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426 +D+A+H P+I FLKQ ++ S Sbjct: 394 SSAYIDEAIHYHPVIDAFLKQKTNEHPS 421 >gi|302872568|ref|YP_003841204.1| ATPase, FliI/YscN family [Caldicellulosiruptor obsidiansis OB47] gi|302575427|gb|ADL43218.1| ATPase, FliI/YscN family [Caldicellulosiruptor obsidiansis OB47] Length = 434 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 148/328 (45%), Positives = 214/328 (65%), Gaps = 4/328 (1%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 F I GR+++ LG+PIDG + K + + ++ P + R R++ GI+ I Sbjct: 90 FEIKVGNELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLERPRIDTIMPLGIKAI 148 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLG 211 D + GQR+G+FAGSG+GKSTLL M AR+ D +++L+GERGRE++EF+E D Sbjct: 149 DALLTIGRGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGERGRELKEFLEKDLKE 208 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 + LK+SVVVVATSDES + R A A+ IAEYF +G +VL ++DS+TRFA + REI Sbjct: 209 EGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLMDSLTRFAMAQREIGL 268 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 GE PV+RGY SVFS +P+LLER G + +KG+ITA+ +VLVDGD+ N+PI D+ R I Sbjct: 269 AIGEPPVSRGYTPSVFSIMPKLLERAG--KNQKGSITALFTVLVDGDDFNEPITDTARGI 326 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHIVL+R++A + YP VD LAS+SR+ + + ++L + ++ + E D+ Sbjct: 327 LDGHIVLSRAIANKNHYPAVDVLASISRVMNDIVESSHRELANETKRILAVYREAEDLIN 386 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 IG Y G + +D+A+ VP I FL+Q Sbjct: 387 IGAYTKGSNPEIDRAIELVPRINQFLRQ 414 >gi|170758369|ref|YP_001787980.1| flagellar protein export ATPase FliI [Clostridium botulinum A3 str. Loch Maree] gi|169405358|gb|ACA53769.1| flagellar protein export ATPase FliI [Clostridium botulinum A3 str. Loch Maree] Length = 438 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 168/392 (42%), Positives = 238/392 (60%), Gaps = 9/392 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 +++ KN +V+ + V + P+G I+ G V G+ + S G+V++ Sbjct: 49 IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P++G++ + +++ S P M R+R++ TGI+ ID F + GQRIG+F Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKST L M A+ D +I+L+GERGREVR+FIE LG+ LKKSV+V ATSD+ Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R TA IAEYF +G V+L++DS+TRFA + REI GE P +GY SV Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F++LPRL+ER G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L+SVSRL + S + K L+ ++ + D+ IG Y G + +D A Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMA 404 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +H I FLKQ + S F+E T LQ Sbjct: 405 IHYHESIISFLKQGIGEHHS---FKESTSILQ 433 >gi|311695214|gb|ADP98087.1| flagellum-specific ATP synthase FliI [marine bacterium HP15] Length = 464 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 155/391 (39%), Positives = 229/391 (58%), Gaps = 4/391 (1%) Query: 32 VYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW 90 V T+ C+ + +GD V G+N+ N+ +V+ D VY+ P+ E + G V Sbjct: 32 VGLTLECVGCPMVVGDRCVIFGQNTGNVEAEVVGFEDDRVYLMPLTAIEGLKPGARVVPL 91 Query: 91 -GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 R+ GRV++ G+P+DG L + + + + + +NR V + GI Sbjct: 92 SAASRVPVGPQLLGRVVDGSGEPLDGKGPL-QAEARVALTGDIINPLNRAPVRQSMDVGI 150 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 R I+ + GQR+G+FAGSG+GKS LL M R D ++ L+GERGREV+EFIED Sbjct: 151 RAINALMTVGQGQRLGLFAGSGVGKSMLLGMMTRFTDADITVVGLIGERGREVKEFIEDI 210 Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG+ L +SVVV A +D+SP++R A + IAEY+ +G VLL++DS+TR+A + RE Sbjct: 211 LGEEGLSRSVVVAAPADDSPLMRLRAAMLTTRIAEYYRDQGKRVLLLMDSLTRYAQAQRE 270 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 IA GE P +GYP SVF++LP+L+ER G G+ITA +VL +GD+ DPIAD+ Sbjct: 271 IALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDDQQDPIADAA 330 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R+ILDGHIVL+R LAEEG YP +D AS+SR+ + + + R+++ RD Sbjct: 331 RAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTETEHFSRAQRFKQVYSRYQQARD 390 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +G Y G D D A+ + + FL+Q Sbjct: 391 LISVGAYVKGSDPETDFAITHIGNMRQFLQQ 421 >gi|157364752|ref|YP_001471519.1| flagellar protein export ATPase FliI [Thermotoga lettingae TMO] gi|157315356|gb|ABV34455.1| flagellar protein export ATPase FliI [Thermotoga lettingae TMO] Length = 436 Score = 281 bits (720), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 150/328 (45%), Positives = 215/328 (65%), Gaps = 4/328 (1%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 R + S GR+++ LG+PIDG + K +++ P + R R+ G+R Sbjct: 92 RLDVGVSEDMKGRIVDGLGRPIDGKPLIAKH--RYPLINSAPHPLKRSRITAPLPVGVRA 149 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 ID F + GQRIG+FAGSG+GKSTLL M AR+ D +I+L+GERGREVREFIE L Sbjct: 150 IDGFITIGKGQRIGIFAGSGVGKSTLLGMIARNTVADVNVIALIGERGREVREFIEKDLA 209 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 ++KS+VVV+TSD+ ++R A TA +IAEYF G +VLL++DS+TR+A + REI Sbjct: 210 KGIEKSIVVVSTSDQPALMRSKALYTATSIAEYFRDLGYDVLLMVDSLTRWAMAQREIGL 269 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 GE P ARGYP SVF+ +P +LER G S +KG+ITA+ +VLV+ D+ N+PI+D+VRS+ Sbjct: 270 AIGEPPTARGYPPSVFAGIPGILERAGNS--DKGSITAIYTVLVEADDFNEPISDTVRSV 327 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 +DGHI+L+R L+E YP +D LASVSRL D + +L +L+ + E +D+ Sbjct: 328 VDGHIMLSRRLSELNHYPAIDVLASVSRLMVDIVGHDHLEASRNLRNLMATYYEAKDLID 387 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +G Y+PG + +D+A+ + I FLKQ Sbjct: 388 VGAYKPGSNPQIDRAIKMIDPINSFLKQ 415 >gi|15895428|ref|NP_348777.1| flagellar-Type ATPase [Clostridium acetobutylicum ATCC 824] gi|15025152|gb|AAK80117.1|AE007716_6 Flagellar-Type ATPase [Clostridium acetobutylicum ATCC 824] gi|325509574|gb|ADZ21210.1| Flagellar-Type ATPase [Clostridium acetobutylicum EA 2018] Length = 438 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 164/392 (41%), Positives = 238/392 (60%), Gaps = 9/392 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107 +++ +N +V+ N V + P+G E IS G V G + S G+V++ Sbjct: 47 IIYNERNRPIKCEVVGFNEGRVILMPLGELEGISPGCRVVQTGIPLSVKCSDELLGKVLD 106 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P+ G++ K + ++ + P + R+R++ +TG+R ID F GQRIG+F Sbjct: 107 GLGAPLRGEEV--KSGVLYQLDREPPDPLKRRRIKNSIETGVRAIDGFLTCGEGQRIGIF 164 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKST L M AR D +I+L+GERGREV +FIE LG+ +K+SV+V ATSD+ Sbjct: 165 AGSGVGKSTTLGMIAREAKADVNVIALIGERGREVLDFIEKDLGEEGMKRSVIVCATSDK 224 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R TA IAEYF KG V+L++DS+TRFA + RE+ +GE P +GY SV Sbjct: 225 PALVRLKGAFTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLATGEPPATKGYTPSV 284 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F+ LPRL+ER G +E G+ITA +VLVDGD+ N+PIAD+VRSILDGHIVL+R+LA + Sbjct: 285 FAMLPRLMERSGMAET--GSITAFYTVLVDGDDFNEPIADAVRSILDGHIVLSRNLAAQN 342 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L+SVSRL + +D KK L+ +++ D+ IG Y G + +D A Sbjct: 343 HYPAIDVLSSVSRLMSEIADSDHKKAAGLARDLLAEYKKNEDLINIGAYVKGTNNKVDAA 402 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 ++ I +LKQ + SS F+E L+ Sbjct: 403 INYNDRIISYLKQGIEEKSS---FEESINSLK 431 >gi|170756099|ref|YP_001782276.1| flagellar protein export ATPase FliI [Clostridium botulinum B1 str. Okra] gi|169121311|gb|ACA45147.1| flagellar protein export ATPase FliI [Clostridium botulinum B1 str. Okra] Length = 438 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 166/392 (42%), Positives = 238/392 (60%), Gaps = 9/392 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 +++ KN +V+ + V + P+G I+ G V G+ + S G+V++ Sbjct: 49 IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P++G++ + +++ S P M R+R++ TGI+ ID F + GQRIG+F Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKST L M A+ D +I+L+GERGREVR+FIE LG+ LKKSV+V ATSD+ Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R TA IAEYF +G V+L++DS+TRFA + REI GE P +GY SV Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F++LPRL+ER G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L+SVSRL + S + K L+ ++ + D+ IG Y G + +D + Sbjct: 345 HYPAIDILSSVSRLMSEIASKEHKNAAGMARDLLATYKNSEDLINIGAYVKGSNPKVDMS 404 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +H I FLKQ + + F+E T LQ Sbjct: 405 IHYHESILSFLKQG---IGEQHSFEESTSILQ 433 >gi|302389661|ref|YP_003825482.1| type III secretion system ATPase, FliI/YscN [Thermosediminibacter oceani DSM 16646] gi|302200289|gb|ADL07859.1| type III secretion system ATPase, FliI/YscN [Thermosediminibacter oceani DSM 16646] Length = 439 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 159/363 (43%), Positives = 226/363 (62%), Gaps = 5/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ D + + P+G E I GD V G+ P GR+++ LG PIDG Sbjct: 58 LAEVVGFRDDTLILMPLGDMEGIGPGDEVEATGKKLTVPVGEQLLGRILDGLGTPIDGKG 117 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + K + + + P + R + GI+VID GQR+G+FAGSG+GKSTL Sbjct: 118 PV-KSHIHYPLFNSPPNPVERAPITSPLPLGIKVIDTLLTCGRGQRVGIFAGSGVGKSTL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M AR+ D +I+L+GERGRE+ F+ LG+ LK+SVVVVATSD+SP++R A Sbjct: 177 LGMIARNTKADVNVIALIGERGRELNSFLMKDLGEEGLKRSVVVVATSDKSPLIRTKAAF 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA IAEYF +G +V+L++DS+TRFA + RE+ +GE PV +GY SVF+ LP+LLER Sbjct: 237 TATAIAEYFRDQGLDVMLMMDSVTRFAMAQREVGLAAGEPPVTKGYTPSVFAILPKLLER 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G+IT + +VLV+GD+ N+PI+D+VR ILDGHIVL+R+LA YP +D LAS Sbjct: 297 AGTS--SAGSITGIYTVLVEGDDLNEPISDTVRGILDGHIVLSRTLANRNHYPAIDVLAS 354 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SRL + S + +KL + + LI + E D+ IG Y G + +D+A+ + I +F Sbjct: 355 ISRLMNDVISDEHRKLAAKVKSLISIYNEAEDLINIGAYVRGSNPKIDEALKYIDDIRNF 414 Query: 417 LKQ 419 L Q Sbjct: 415 LVQ 417 >gi|212639564|ref|YP_002316084.1| flagellum-specific ATP synthase [Anoxybacillus flavithermus WK1] gi|212561044|gb|ACJ34099.1| Flagellar biosynthesis/type III secretory pathway ATPase FliI [Anoxybacillus flavithermus WK1] Length = 437 Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 154/362 (42%), Positives = 225/362 (62%), Gaps = 5/362 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDS 118 +V+ + V + P ++I+ G +V G + + GRVI+ALG P+D D Sbjct: 57 AEVVGFRDEYVLLMPYATVQDIAPGCIVEATGGPLEMKVGSALVGRVIDALGAPLD-DQP 115 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 KG ++ I + P M R + + + G+++ID + GQR+G+FAGSG+GKSTL+ Sbjct: 116 FPKGLTAVPIDRQPPNPMTRPPISEPIEVGVKMIDSLLTVGKGQRVGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 M AR+ D +I+L+GERGREVREFIE LG + LK+S+V+VATSD+ ++R T Sbjct: 176 GMIARNTNADLNVIALIGERGREVREFIERDLGPEGLKRSIVIVATSDQPALMRIKGAYT 235 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G NV+ ++DS+TR A + RE+ GE P +GY SVF+ LP+LLER Sbjct: 236 ATAIAEYFRDQGLNVMFMMDSVTRVAMAQREVGLAVGEPPTTKGYTPSVFAILPKLLERT 295 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G +E G ITA +VLVDGD+ N+PIAD+VR ILDGH VL R LA +G+YP ++ L SV Sbjct: 296 GTNEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHFVLERQLANKGQYPAINVLKSV 353 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + +K+ L L+ + ++ D+ IG Y+ G +D+A+ P I FL Sbjct: 354 SRVMNYIVTPEHRKVAEKLRELLATYVQSEDLIQIGAYKRGSSREIDEAIRYYPKIISFL 413 Query: 418 KQ 419 KQ Sbjct: 414 KQ 415 >gi|218673217|ref|ZP_03522886.1| flagellum-specific ATP synthase [Rhizobium etli GR56] Length = 175 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 129/175 (73%), Positives = 153/175 (87%) Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 M RQRV GFKTG+R IDIF+PLC GQR+G+FAGSG+GKSTLLSM AR+D FDKV+I+LV Sbjct: 1 MTRQRVGTGFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLARADAFDKVVIALV 60 Query: 196 GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 GERGREVREFIED LG N+KK++ +VATSDESP+LRKMAPLTA+TIAE+F KG+NVL I Sbjct: 61 GERGREVREFIEDTLGSNMKKAIAIVATSDESPMLRKMAPLTAITIAEHFRDKGENVLFI 120 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +DS+TRFAH+IRE+AT SGE P+ARGYP SVF+ELPRLLER GP + G ITA+ Sbjct: 121 VDSVTRFAHAIREVATASGEPPIARGYPASVFTELPRLLERAGPGPEGAGTITAI 175 >gi|222530136|ref|YP_002574018.1| FliI/YscN family ATPase [Caldicellulosiruptor bescii DSM 6725] gi|222456983|gb|ACM61245.1| ATPase, FliI/YscN family [Caldicellulosiruptor bescii DSM 6725] Length = 431 Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 156/401 (38%), Positives = 240/401 (59%), Gaps = 13/401 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP----VGIGE 79 G+++ + + T+ V +G + ++ L +V+ + V + P VG+ Sbjct: 19 GFVNQVIGL--TIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGV-- 74 Query: 80 EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 ++ F + GR+++ LG+PIDG + K + + ++ P + R Sbjct: 75 -FPGCKVIAQDSMFEVKVGKELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLERP 132 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R++ GI+ ID + GQR+G+FAGSG+GKSTLL M AR+ D +++L+GERG Sbjct: 133 RIDTIMPLGIKAIDTLLTIGKGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGERG 192 Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 RE++EF+E D + LK+SVVVVATSDES + R A A+ IAEYF +G +VL ++DS Sbjct: 193 RELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLMDS 252 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI GE PV+RGY SVFS +P+LLER G + +KG+ITA+ +VLVDGD Sbjct: 253 LTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAG--KNQKGSITALFTVLVDGD 310 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + N+PI D+ R ILDGHIVL+R++A + YP +D LAS+SR+ + ++L + Sbjct: 311 DFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVEPSHRELANETKR 370 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 ++ + E D+ IG Y G + +D+A+ VP I FL+Q Sbjct: 371 VLAVYREAEDLINIGAYTKGSNPEIDRAIELVPRINQFLRQ 411 >gi|269836579|ref|YP_003318807.1| ATPase, FliI/YscN family [Sphaerobacter thermophilus DSM 20745] gi|269785842|gb|ACZ37985.1| ATPase, FliI/YscN family [Sphaerobacter thermophilus DSM 20745] Length = 442 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 152/327 (46%), Positives = 210/327 (64%), Gaps = 4/327 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ LG+PIDG L D + S P ++R +E TGIR ID GQ Sbjct: 107 GRVIDGLGRPIDGQGPLLCRD-ETRLSSSPPDPLSRMPIEHPLPTGIRAIDALITCGRGQ 165 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKSTLL M R+ D +++L+GERGREV+EFIE LG + L +SVVVV Sbjct: 166 RLGIFAGSGVGKSTLLGMICRNADCDVRVVALIGERGREVQEFIERDLGPEGLARSVVVV 225 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +TSD+ +LR A TA IAEYF +G NV L++DS+TR A + REI GE P RG Sbjct: 226 STSDQPALLRLKAAWTATMIAEYFRDRGLNVALLMDSVTRLAMAQREIGLAVGEPPTTRG 285 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF+ LPRLLER G E+G+ITA +VLV+GD+ +P+ D+VR ILDGHI L+R Sbjct: 286 YTPSVFALLPRLLERAG--NAERGSITAFYTVLVEGDDLTEPVTDAVRGILDGHIYLSRK 343 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G +P ++ L SVSRL + ++L + + L+ +E RD+ IG Y G + Sbjct: 344 LADSGHFPAIEVLGSVSRLMNAIVDERHRRLAAEVRELMAAYEGARDLIEIGAYAAGSNP 403 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 ++D+A+ +P I +FL+Q+P + + D Sbjct: 404 VVDRAIAHMPRIREFLRQAPDEPARMD 430 >gi|326791540|ref|YP_004309361.1| ATPase, FliI/YscN family [Clostridium lentocellum DSM 5427] gi|326542304|gb|ADZ84163.1| ATPase, FliI/YscN family [Clostridium lentocellum DSM 5427] Length = 433 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 161/401 (40%), Positives = 241/401 (60%), Gaps = 9/401 (2%) Query: 25 YISSITSVY-YTVTCLSQYVCLGD--FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 Y +T V ++ L +GD ++ +GK +V+ + + + P+G E I Sbjct: 18 YKGRVTRVVGMSIETLGPIANIGDICYIQPRGKKELVTAEVVGFKDEYLLLMPLGNLEGI 77 Query: 82 SLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 G V +G + + G+V++ KPI+GD+ + + I + P + R R Sbjct: 78 GPGCEVLAYGDKLSVKVDESLLGKVVDWRAKPINGDELHCR--YQVPIDNTAPNPLTRNR 135 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 + + G+R ID + GQRIG+FAGSG+GKSTL+ M AR+ D II+L+GERGR Sbjct: 136 ITIPLQLGVRAIDGMLTVGKGQRIGIFAGSGVGKSTLMGMIARNALSDINIIALIGERGR 195 Query: 201 EVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EVREFIE D + LK+S+VVVATSD+ ++R A +TA +AE+F ++G +VLL++DS+ Sbjct: 196 EVREFIENDLQAEGLKRSIVVVATSDQPALMRLKAAMTATALAEHFRAQGKDVLLMMDSL 255 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRF+ + REI GE PV+RGY SVF+++P+LLER G S +KG+IT + +VLVDGD+ Sbjct: 256 TRFSMAQREIGLAIGEPPVSRGYTPSVFAQMPKLLERAGNS--DKGSITGMYTVLVDGDD 313 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 N+PI D+ R ILDGHIVL+R LA +G YP +D LAS+SR+ S K + Sbjct: 314 FNEPITDTARGILDGHIVLSRKLANKGHYPAIDVLASISRVMSNIVSDQHKTYAREIKKH 373 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + ++E D+ +G Y G +D A+ ++ I +FL QS Sbjct: 374 MAVYKEAEDLINVGAYNKGSSEEIDAAIDKMKFINEFLCQS 414 >gi|153953781|ref|YP_001394546.1| hypothetical protein CKL_1156 [Clostridium kluyveri DSM 555] gi|219854397|ref|YP_002471519.1| hypothetical protein CKR_1054 [Clostridium kluyveri NBRC 12016] gi|146346662|gb|EDK33198.1| FliI [Clostridium kluyveri DSM 555] gi|219568121|dbj|BAH06105.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 439 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 173/414 (41%), Positives = 248/414 (59%), Gaps = 9/414 (2%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76 N Q G + + + V + +V G+ V+ +N + +V+ V + P+G Sbjct: 17 NFTYQEGIVKKVIGLTIEVEGIKAFV--GEVCNVYSEENGNIACEVVGFKEKDVILMPLG 74 Query: 77 IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 IS G V R + S G+V++ LG P+ G+D + G L E+ ++ P Sbjct: 75 ELIGISPGCRVVPGRRPLSVKCSEELFGKVLDGLGNPL-GEDEISSGVL-YELDAEPPDP 132 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 + R+R+++ TGIR ID F GQRIG+FAGSG+GKST L M AR D +I+L+ Sbjct: 133 LKRKRIKQVISTGIRAIDGFLTCGEGQRIGIFAGSGVGKSTTLGMIARYAEADVNVIALI 192 Query: 196 GERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREVR+FIE LG+ LKKS++V ATSD+ ++R TA IAEYF KG V+L Sbjct: 193 GERGREVRDFIEKDLGEEGLKKSIIVCATSDKPALVRLKGAFTATAIAEYFRDKGKKVIL 252 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DS+TRFA + REI GE P +GY SVF++LPRL+ER G S+K G+ITA +VL Sbjct: 253 MMDSVTRFAMAQREIGLAVGEPPATKGYTPSVFAKLPRLMERSGMSDK--GSITAFYTVL 310 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 VDGD+ N+PIAD+VR ILDGHIVL+RSLA + YP +D L+S+SRL + KK S Sbjct: 311 VDGDDLNEPIADAVRGILDGHIVLSRSLANKNHYPAIDVLSSISRLMSEITEKSHKKSAS 370 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 ++ ++ + D+ IG Y G + +D A++ I ++LKQ+ + SS D Sbjct: 371 FARDMLSVYKNSEDLINIGAYIRGNNPNIDMAINYYDGIINYLKQNMDEYSSFD 424 >gi|126460779|ref|YP_001041893.1| FliI/YscN family ATPase [Rhodobacter sphaeroides ATCC 17029] gi|126102443|gb|ABN75121.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides ATCC 17029] Length = 436 Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 167/414 (40%), Positives = 242/414 (58%), Gaps = 2/414 (0%) Query: 11 LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70 LAE + L + G ++ I +V L Q LGD V G G+V+R++ V Sbjct: 9 LAEIAAIPLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSAHEV 68 Query: 71 YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 I P G E +++GD V G I+P W GR+++ LG+P+DG L +G + + + Sbjct: 69 TILPDGSPEGLAIGDAVALVGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 P A R+ + TG+ V D PL GQRIG+FAGSG+GKS+LL+ FARS D V Sbjct: 128 AAPAAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187 Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I LVGERGRE+R+F E LG + ++VVV ATSD+SP++R+ A+ +AE+F +G Sbjct: 188 VIGLVGERGRELRDFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VLL++DSITRFA + RE+A GE RG+P S + L ER GP + G+ITA Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGAEGTGDITA 307 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 V SVLV G + +P+AD +R +LDGH+V++R +AE GR+P +D L SVSR +A S E Sbjct: 308 VFSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSVSRALPEAASTAE 367 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L++ L+ ++ + G Y G D ++D A+ P + FL + D Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDAPD 421 >gi|313673741|ref|YP_004051852.1| type iii secretion system atpase, flii/yscn [Calditerrivibrio nitroreducens DSM 19672] gi|312940497|gb|ADR19689.1| type III secretion system ATPase, FliI/YscN [Calditerrivibrio nitroreducens DSM 19672] Length = 434 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/392 (40%), Positives = 238/392 (60%), Gaps = 6/392 (1%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVI 106 ++ G + L ++I D + + P G E I+ G V +G + + GR++ Sbjct: 44 LIENGSRNGILAEIIGFKDDRIVLMPYGESEGIAPGSRVRNVSYGN-SVKVTEKLLGRIL 102 Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 + LG PID + +L + ++ P + R+ ++ TG++ ID + +GQR+G+ Sbjct: 103 DGLGNPIDDKGPITDFEL-WPVYNEPPKPLEREIIKDVIPTGVKAIDGLITVGNGQRVGI 161 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSD 225 FAGSG+GKS LL M AR+ + +I+L+GERGREVREFIE LG+ LK+SV+VVATSD Sbjct: 162 FAGSGVGKSVLLGMIARNTSAEVNVIALIGERGREVREFIERDLGEEGLKRSVIVVATSD 221 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 +SP++RK+ A TIAEYF S G NV+ ++DS+TRFA + REI GE P ++GY S Sbjct: 222 QSPLVRKLGAFVATTIAEYFRSTGKNVMFMMDSVTRFAMAQREIGLTVGEPPTSKGYTPS 281 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VF+ LP+LLER G ++K +G +T + +VLV+GD+ DPIADSVRSI+DGHIVL+R LA Sbjct: 282 VFALLPKLLERAG-TKKGEGAVTGLYTVLVEGDDLTDPIADSVRSIIDGHIVLSRLLAAR 340 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 +P +D L S SRL + + + +L + L+ + E D+ IG Y G + +D Sbjct: 341 NHFPAIDVLMSASRLMKEIVTDEHFRLAGMMRDLMAAYNEAEDLINIGAYAKGSNKRIDT 400 Query: 406 AVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 A+ ++ I FL+Q + E+ KK+ Sbjct: 401 AIAKIDAINSFLRQGIDEKFDFTTTYELIKKI 432 >gi|222824465|ref|YP_002576039.1| flagellum-specific ATP synthase FliI [Campylobacter lari RM2100] gi|222539686|gb|ACM64787.1| flagellum-specific ATP synthase FliI [Campylobacter lari RM2100] Length = 436 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 160/412 (38%), Positives = 235/412 (57%), Gaps = 8/412 (1%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDF---VVHQGKNSDNLGQVIRINLDIVYI 72 S+NL G I+ I+S + L +GD V + ++ + + V+ ++ ++ Y+ Sbjct: 12 SQNLTSVFGQITKISSTSIEINGLK--TSIGDIIKIVSSEDESKEAMAMVVEVDENLSYL 69 Query: 73 CPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 P G E +GD F + +I S GRV++ +P DG + M IM Sbjct: 70 SPFGFVEGFKIGDRAFINDAGMQIGVSDELLGRVVDPFMRPKDGKGPIEASKF-MPIMRA 128 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ M ++ + Sbjct: 129 PIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLMGMIVKNSKAPIKV 188 Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 I+L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A+++AEYF +G + Sbjct: 189 IALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAMSVAEYFKEQGKD 248 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G E+ KG ITA Sbjct: 249 VLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG-KEEGKGTITAFF 307 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S SR+ S + K Sbjct: 308 TVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASRVMGDIISDEHKL 367 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L +E + IG Y+ G D LD+A+ + + FL Q+P + Sbjct: 368 AARKFKRLNSLLKENEVLLRIGAYQKGTDKELDQAIAKKDFMQQFLSQNPEE 419 >gi|61219459|gb|AAX40636.1| HrpB6 [Xanthomonas oryzae pv. oryzicola] Length = 486 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 158/367 (43%), Positives = 220/367 (59%), Gaps = 5/367 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P GRV++ LG+P DG ++ Sbjct: 107 EVVGFSRDLALLAPFGELIGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPSDGQGAI 166 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + I ++ P M R+ +E TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 167 AC-DTWVPIQAQAPDPMRRRLIEHPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 225 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 226 MFARGTQCDVNVIVLIGERGREVREFIELILGADGLARSVVVCATSDRSSIERAKAAYVG 285 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 286 TAIAEYFRDRGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 345 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D LAS+S Sbjct: 346 --MGESGSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLASLS 403 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + L L+ ++ E + +G YR G D + D+A+ ++ I DFL Sbjct: 404 RVMSQIVPSYHSQAAGRLRRLLAKYNEVETLVQVGEYRQGSDAVADEAIDRIDAIRDFLS 463 Query: 419 QSPSDLS 425 Q LS Sbjct: 464 QPTDQLS 470 >gi|260778617|ref|ZP_05887509.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus ATCC BAA-450] gi|260604781|gb|EEX31076.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus ATCC BAA-450] Length = 439 Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 171/387 (44%), Positives = 239/387 (61%), Gaps = 16/387 (4%) Query: 56 SDNLGQVIRINLDIVYICP----VGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGK 111 +D +V+ I + ++ P GIG ++++ + + H R + GRV++ LG Sbjct: 58 NDLKAEVVAIKGEEAWLSPFRSTTGIGTDMNV-EPMGHGHRVMVGEE--LLGRVVDGLGH 114 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 P+D + +GK E + P + R+ + K TGIR ID L GQR+G+FA +G Sbjct: 115 PMDESNWVGK---WRENHGEAPDPLKRKLISKIMPTGIRAIDSTLALGVGQRVGIFAAAG 171 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPIL 230 GKSTLL M A D ++++LVGERGREVREFIE L K K+V+VVATSD+ P+ Sbjct: 172 GGKSTLLGMLAGHCEADVIVLALVGERGREVREFIEYCLPPAAKEKTVLVVATSDKPPLE 231 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R A +TA TIAEYF +G NVLL++DS+TRFA + REI +GE PVA G+P SVF +L Sbjct: 232 RMKAAVTATTIAEYFRDQGKNVLLMVDSLTRFARAGREIGLAAGEPPVANGFPPSVFVQL 291 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 LLER GP+ G+ITA+ +VLV+GDN N+P+AD VRSILDGHIVL+R LA G YP Sbjct: 292 ASLLERAGPAPV--GSITAIYTVLVEGDNMNEPVADEVRSILDGHIVLSRKLAGAGHYPA 349 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410 +D ASVSR+ D+ +A K L HL+ ++E + + +G Y+PG D D+AV + Sbjct: 350 IDVNASVSRVMDQIVTAQHKDDAKHLRHLLSLYQEVQLLIRVGEYQPGQDPATDEAVAKF 409 Query: 411 PIIYDFLKQSPSDLSSEDVFQEITKKL 437 I FL Q ++ S F+E ++L Sbjct: 410 DSIERFLCQRANEPSP---FKETLQQL 433 >gi|296133046|ref|YP_003640293.1| flagellar protein export ATPase FliI [Thermincola sp. JR] gi|296031624|gb|ADG82392.1| flagellar protein export ATPase FliI [Thermincola potens JR] Length = 440 Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 158/363 (43%), Positives = 226/363 (62%), Gaps = 9/363 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + + P+G I G V G F+I S+ GRVI+ LG PIDG L Sbjct: 58 EVVGFKENRILLMPLGDLTGIGPGCEVVATGHSFKIGVSSKMLGRVIDGLGNPIDG---L 114 Query: 120 GKGDLSMEIMSKVPPA--MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + E PP + R+R+ + G++ +D GQR+G+F+GSG+GKSTL Sbjct: 115 GPIEWETEYPVSGPPPNPLERKRITEPLSVGVKAVDGLLTCGKGQRVGIFSGSGVGKSTL 174 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPL 236 L M AR+ D +I+L+GERGREVREF+E LG+ L++SVVVVATSD+ ++R L Sbjct: 175 LGMIARNTAADINVIALIGERGREVREFLEKDLGEEGLRRSVVVVATSDQPALVRLKGAL 234 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +IAEYF +G +V+L++DS+TRFA + RE+ GE P RGY SVF+ LP+LLER Sbjct: 235 VATSIAEYFRDQGKDVMLMMDSVTRFAMAQREVGLAVGEPPATRGYTPSVFALLPKLLER 294 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G IT + +VLVDGD+HN+PIAD+VR ILDGHIVL+R LA + +YP +D LAS Sbjct: 295 SGTSRH--GTITGLYTVLVDGDDHNEPIADAVRGILDGHIVLSRDLAMQNQYPAIDILAS 352 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ S + +K + ++ + + +D+ IG Y G + +D A+ ++ +F Sbjct: 353 VSRVMPDIVSEEHRKAAQEIKSILATYRDAKDLIDIGAYHKGSNPKIDYALSKLDDTLNF 412 Query: 417 LKQ 419 LKQ Sbjct: 413 LKQ 415 >gi|319649564|ref|ZP_08003720.1| flagellum-specific ATP synthase [Bacillus sp. 2_A_57_CT2] gi|317398726|gb|EFV79408.1| flagellum-specific ATP synthase [Bacillus sp. 2_A_57_CT2] Length = 438 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 163/386 (42%), Positives = 237/386 (61%), Gaps = 10/386 (2%) Query: 44 CLGDF-VVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSA 99 +GD ++H GK +V+ + V + P ++IS G LV R + Sbjct: 38 SIGDVCIIHIGKGRTRRIQAEVVGFKNENVILMPYTDVQDISPGSLVETTSRPLEVKIGP 97 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPL 158 G+ I++LG+P+DG + L KG L+ + + PP + R + + + G+R+ID + Sbjct: 98 ALIGKAIDSLGQPLDGGN-LPKG-LTPVLTEQTPPNPLKRPPISEPIEVGVRMIDSMLTV 155 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217 +GQR+G+FAGSG+GKSTLL M AR+ D +I+L+GERGREVREFIE LG + LK+S Sbjct: 156 GNGQRVGIFAGSGVGKSTLLGMIARNTNADLNVIALIGERGREVREFIERDLGPEGLKRS 215 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +VV ATSD+ ++R TA IAEYF KG NV+L++DS+TR A + RE+ GE P Sbjct: 216 IVVAATSDQPALMRIKGAYTATAIAEYFRDKGLNVMLMMDSVTRVAMAQREVGLAVGEPP 275 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GY SVF+ LP+LLER G +E G+ITA +VLVDGD+ N+PIAD+VR ILDGH V Sbjct: 276 TTKGYTPSVFAVLPKLLERTGTNEY--GSITAFYTVLVDGDDMNEPIADTVRGILDGHFV 333 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R+LA +G+YP ++ L SVSR+ + A K + L+ + D+ IG Y+ Sbjct: 334 LDRALANKGQYPAINVLKSVSRVMNHIADASHIKSAEKVRELLSTYINAEDLINIGAYKR 393 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSD 423 G + +D+A+ P I FLKQ ++ Sbjct: 394 GSSMEIDEAIRLYPSIISFLKQETNE 419 >gi|295706282|ref|YP_003599357.1| flagellum-specific ATP synthase [Bacillus megaterium DSM 319] gi|294803941|gb|ADF41007.1| flagellum-specific ATP synthase [Bacillus megaterium DSM 319] Length = 437 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 164/388 (42%), Positives = 239/388 (61%), Gaps = 12/388 (3%) Query: 43 VCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSAC 100 VC +H + D + +V+ N + V + P I G LV + ++S Sbjct: 42 VCF----IHLSEQGDKIRAEVVGFNGEHVVLMPYTSVRYIGPGCLVETTEKPLQVSVGKE 97 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLC 159 G+V+++LG P+DG + L + + PP + R +E+ + G+R ID + Sbjct: 98 LIGQVLDSLGNPLDGSEF--SHYLPFVLTDQDPPNPLERPPIEQPIEVGVRTIDSLLTVG 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218 GQRIG+FAGSG+GKSTLL M AR+ D +I+LVGERGREVREFIE LG+ LK+SV Sbjct: 156 QGQRIGIFAGSGVGKSTLLGMIARNTKADINVIALVGERGREVREFIERDLGEEGLKRSV 215 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VVVATSD+ +LR A TA +IAEYF ++G +V++++DS+TR A + REI GE P Sbjct: 216 VVVATSDQPALLRMKAAYTATSIAEYFRNEGLSVMMMMDSVTRVAMAQREIGLAVGEPPT 275 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GY SVF+ LPRLLER G ++ G+ITA +VLVDGD+ N+PI+D+VR I+DGHIVL Sbjct: 276 TKGYTPSVFASLPRLLERTGTNQH--GSITAFYTVLVDGDDMNEPISDTVRGIIDGHIVL 333 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LA +G+YP ++ L SVSR+ + S ++ L L+ + + D+ IG Y+ G Sbjct: 334 DRELANKGQYPAINVLKSVSRVMNHIVSEQHREAAGKLRSLMATYANSEDLINIGAYKRG 393 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426 +D+A++ P+I FLKQ ++ S Sbjct: 394 SSAYIDEAIYYHPVIDAFLKQKTNEHPS 421 >gi|254228795|ref|ZP_04922218.1| ATPase FliI/YscN family [Vibrio sp. Ex25] gi|262396486|ref|YP_003288339.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25] gi|151938742|gb|EDN57577.1| ATPase FliI/YscN family [Vibrio sp. Ex25] gi|262340080|gb|ACY53874.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25] Length = 448 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 228/367 (62%), Gaps = 5/367 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ I Y+ P+ +G + ++ G + SA W GRV+N LG+P+D Sbjct: 66 AQVVGFEHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSAQWLGRVLNGLGEPLDDGAP 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREFIE L + KK++++ A +DESP++R A L Sbjct: 184 MGMITKNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 ++EYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 244 LCHRVSEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE + G++TA+ +VL +GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS Sbjct: 304 AGNSENQHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + ++ + + + +++ +GGY+PG D LD++V P + + Sbjct: 364 ISRCMSTCTQEAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVAMYPNLRAY 423 Query: 417 LKQSPSD 423 L+Q+ ++ Sbjct: 424 LQQAANE 430 >gi|156976205|ref|YP_001447111.1| flagellum-specific ATP synthase [Vibrio harveyi ATCC BAA-1116] gi|156527799|gb|ABU72884.1| hypothetical protein VIBHAR_04976 [Vibrio harveyi ATCC BAA-1116] Length = 450 Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 148/367 (40%), Positives = 228/367 (62%), Gaps = 5/367 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + + Y+ P+ +G + ++ G + S+ W GRV+N LG+P D Sbjct: 66 AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVVNGLGEPFDDGAP 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREF+E L + KK+++V A +DESP++R A L Sbjct: 184 MGMITQNTEADVIVVGLIGERGREVREFVERNLTPEARKKAIIVAAPADESPLMRLRATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AEYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE G++TA+ +VL +GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS Sbjct: 304 AGNSENPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + ++ L + + +++ +GGY+PG D LD++V P + + Sbjct: 364 ISRCMNACTHEAHSTIANNFRQLYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRAY 423 Query: 417 LKQSPSD 423 L+QS ++ Sbjct: 424 LQQSANE 430 >gi|323341383|ref|ZP_08081627.1| flagellum-specific ATP synthase [Lactobacillus ruminis ATCC 25644] gi|323091260|gb|EFZ33888.1| flagellum-specific ATP synthase [Lactobacillus ruminis ATCC 25644] Length = 451 Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 174/436 (39%), Positives = 244/436 (55%), Gaps = 16/436 (3%) Query: 12 AEDY-----SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66 AEDY G +S + + LS +V V +G + L +V+ Sbjct: 10 AEDYLYQAEHHKFYTTYGKVSEVVGLVIKAEGLSVFVGEICEVAVKGSDKVALAEVVGFV 69 Query: 67 LDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDDSLGKGD 123 + V + P+ E I G +V G+ R+ P G ++ LG+P D D Sbjct: 70 KETVLLMPLDELEGIGPGCIVKPTGKTLQVRVGPQ--LLGHTLDGLGRPFDDSDIDNDKL 127 Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 + ++ P R+R+ TG+R ID + GQR+G+FAGSG+GKSTLL M AR Sbjct: 128 VDYPVIQDSPDPFRRKRISNVMPTGVRTIDGLLTVGEGQRMGIFAGSGVGKSTLLGMIAR 187 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242 D ++I L+GERGREV EFIE LG + KSVVV ATSD P++R TA IA Sbjct: 188 YCQADVIVIGLIGERGREVMEFIEKDLGKEGYAKSVVVCATSDTPPLVRLKGAHTATAIA 247 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 EYF +G V+L++DS+TRFA + REI ++GE P +GY SVF+ELP+LLER G SEK Sbjct: 248 EYFRDQGKKVVLMMDSVTRFAMAQREIGLSTGEPPTTKGYTPSVFAELPKLLERSGMSEK 307 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 G+ITA +VLV+GD+ N+PIAD+VR ILDGHIVL+R +A + YP +D S+SRL Sbjct: 308 --GSITAFYTVLVEGDDMNEPIADAVRGILDGHIVLSRKIASQNHYPAIDVQVSLSRLMK 365 Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422 + S + K L + + +++D+ IG Y+ G + ++D AV I DFLKQ Sbjct: 366 ELVSEEHTKDAGELRENMGVYNDSKDLIDIGAYKKGSNAVIDYAVSLHVPIEDFLKQRVE 425 Query: 423 DLSSEDVFQEITKKLQ 438 + SS F+E +L Sbjct: 426 EYSS---FEETESRLH 438 >gi|170737022|ref|YP_001778282.1| FliI/YscN family ATPase [Burkholderia cenocepacia MC0-3] gi|169819210|gb|ACA93792.1| ATPase, FliI/YscN family [Burkholderia cenocepacia MC0-3] Length = 435 Score = 280 bits (716), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 168/421 (39%), Positives = 244/421 (57%), Gaps = 17/421 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82 G +S+++ + VT + G + ++D L +V+ + Y+ P E ++ Sbjct: 21 GRLSAVSGLLLEVTGYAFET--GQLARIETASNDWLDARVVGFREGVSYLMPFRPAEGLA 78 Query: 83 LGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---R 138 G VF G +S A W GR+++ LG+PID L GD +++ PP +N + Sbjct: 79 AGARVFGDDGARMLSIGAAWRGRIVDGLGEPIDDRGPL-VGDAVLDL---APPRVNPLRK 134 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198 Q VE G+R ID L GQR+G+FAGSG+GKS LL M AR D V++ ++GER Sbjct: 135 QPVEGVMDVGVRAIDGMLTLGRGQRVGLFAGSGVGKSVLLGMIARQTAADVVVVGMIGER 194 Query: 199 GREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257 GREVREFIE LG + L K++VVVA +DESP++R MA IA +F G++VLL++D Sbjct: 195 GREVREFIEHSLGPEGLSKAIVVVAPADESPLMRLMATELCHAIATHFRDAGNDVLLMID 254 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 S+TR+A + REIA GE P RGYP SVF LPRL+ER G E G+++A+ +VL +G Sbjct: 255 SLTRYAMAQREIALALGEPPATRGYPPSVFGMLPRLVERAGNGEG-VGSMSAIYTVLAEG 313 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 D+ DP+ D+ R+ILDGHI+L+R LA +G YP +D L SVSR ++ V + Sbjct: 314 DDEQDPVVDTARAILDGHIMLSRDLASQGHYPAIDVLRSVSRCMSLVAPREQIDAVHKVK 373 Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE----DVFQEI 433 ++ R+ RD+ +GGY G DL+ D AV I FL Q+ +++ D+ EI Sbjct: 374 QMMSRYANVRDLIPLGGYVAGADLVTDHAVKMHDRIEAFLCQAQDEVAPRQATLDILTEI 433 Query: 434 T 434 Sbjct: 434 A 434 >gi|225569976|ref|ZP_03779001.1| hypothetical protein CLOHYLEM_06071 [Clostridium hylemonae DSM 15053] gi|225161446|gb|EEG74065.1| hypothetical protein CLOHYLEM_06071 [Clostridium hylemonae DSM 15053] Length = 435 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 152/347 (43%), Positives = 219/347 (63%), Gaps = 4/347 (1%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 R +I GR+I+ALG PID K+ P ++R + + G++ Sbjct: 88 RLKIPVGQFLRGRIIDALGNPIDDKGPFESERYYYVESPKINP-LSRPPISEELHFGVKA 146 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 ID + GQRIG+FAGSG+GKSTLL M AR+ D +I+LVGERGREVREF+E LG Sbjct: 147 IDGLNTIGKGQRIGIFAGSGVGKSTLLGMIARNVETDINVIALVGERGREVREFVEKDLG 206 Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + +K+SV+VVATSD+ +LR P+ A TIAEYF +G +VLL++DS+TRFA + REI Sbjct: 207 PEGMKRSVLVVATSDQPAMLRMKCPIVATTIAEYFKDQGKDVLLMMDSLTRFAMAQREIG 266 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 +GE PVARGY S+++E P+LLER G + E G+IT V +VLV+GD+ N+P+AD+VR Sbjct: 267 LATGEPPVARGYTPSIYAEFPKLLERSG--KFENGSITGVYTVLVEGDDTNEPVADTVRG 324 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 ILDGHIVL+R LA +P +D AS+SRL + + ++L S L ++ +E+ D+ Sbjct: 325 ILDGHIVLSRKLANANHFPAIDVSASISRLMTDIVTEEHRELASKLRDILSVYEQNEDLI 384 Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 IG Y+ G + LD A+ ++ + FL Q +D ++ +K+ Sbjct: 385 SIGAYKSGTNEKLDHAISKIEQVNRFLMQEIDRKYEKDEMLDVMRKI 431 >gi|291484176|dbj|BAI85251.1| flagellum-specific ATP synthase [Bacillus subtilis subsp. natto BEST195] Length = 438 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 156/361 (43%), Positives = 218/361 (60%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + + P I+ G +V G R+ G+VI+A G+P+DG L Sbjct: 58 EVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDGK-LL 116 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 KG + P M R + + G+R ID + GQRIG+FAGSG+GKSTL+ Sbjct: 117 PKGLSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M A+ D +I+LVGERGREVREFIE LG + LK+S+VVVATSD+ ++R A TA Sbjct: 177 MIAKQTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTA 236 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF KG NV+ ++DS+TR A + REI +GE P +GY SVF+ LPRLLER G Sbjct: 237 TAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 296 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 +E G ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S Sbjct: 297 ANEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSIS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + L+ ++ + D+ IG Y+ G +D+A+ P + FLK Sbjct: 355 RVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 414 Query: 419 Q 419 Q Sbjct: 415 Q 415 >gi|289663768|ref|ZP_06485349.1| type III secretion system ATPase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 442 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 154/367 (41%), Positives = 221/367 (60%), Gaps = 5/367 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPADGLGAV 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + + + ++ P M R+ +E+ TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 123 -ECETWVRVQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIEMILGEDGLSRSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 242 TAIAEYFRDQGMRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA +VL + D +DPIA+ VR ILDGH++L+R +A + +YP +D L S+S Sbjct: 302 MG--ESGSITAFYTVLAEDDTGSDPIAEEVRGILDGHLILSREIAAKNQYPAIDVLGSLS 359 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + ++ + L L+ ++ + + +G YR G D D+A+ ++ I DFL Sbjct: 360 RVMSQIVPPEQSQAAGQLRRLLAKYNDVETLLQVGEYREGSDATADEAIARIDAIRDFLC 419 Query: 419 QSPSDLS 425 Q LS Sbjct: 420 QPTDQLS 426 >gi|321315390|ref|YP_004207677.1| flagellum-specific ATP synthase [Bacillus subtilis BSn5] gi|320021664|gb|ADV96650.1| flagellum-specific ATP synthase [Bacillus subtilis BSn5] Length = 438 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 156/361 (43%), Positives = 218/361 (60%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + + P I+ G +V G R+ G+VI+A G+P+DG L Sbjct: 58 EVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDGK-LL 116 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 KG + P M R + + G+R ID + GQRIG+FAGSG+GKSTL+ Sbjct: 117 PKGLSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M A+ D +I+LVGERGREVREFIE LG + LK+S+VVVATSD+ ++R A TA Sbjct: 177 MIAKQTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTA 236 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF KG NV+ ++DS+TR A + REI +GE P +GY SVF+ LPRLLER G Sbjct: 237 TAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 296 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 +E G ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S Sbjct: 297 ANEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSIS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + L+ ++ + D+ IG Y+ G +D+A+ P + FLK Sbjct: 355 RVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 414 Query: 419 Q 419 Q Sbjct: 415 Q 415 >gi|221640831|ref|YP_002527093.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides KD131] gi|221161612|gb|ACM02592.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides KD131] Length = 436 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 168/414 (40%), Positives = 242/414 (58%), Gaps = 2/414 (0%) Query: 11 LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70 LAE + L + G ++ I +V L Q LGD V G G+V+R++ V Sbjct: 9 LAEIAAIPLSRRYGRVTGIGRGTLSVGGLEQGTALGDRVEICGAGGILGGEVLRLSSHEV 68 Query: 71 YICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 I P G E +++GD V G I+P W GR+++ LG+P+DG L +G + + + Sbjct: 69 TILPDGSPEGLAIGDAVALIGPAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPRARPLRA 127 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PPA R+ + TG+ V D PL GQRIG+FAGSG+GKS+LL+ FARS D V Sbjct: 128 AAPPAAARRSLGPRLPTGVAVFDTLLPLVQGQRIGLFAGSGVGKSSLLAKFARSVVADVV 187 Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I LVGERGRE+REF E LG + ++VVV ATSD+SP++R+ A+ +AE+F +G Sbjct: 188 VIGLVGERGRELREFTERVLGPAGMARAVVVTATSDQSPLVRRRCGWAAMAVAEHFRDQG 247 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VLL++DSITRFA + RE+A GE RG+P S + L ER GP G+ITA Sbjct: 248 LHVLLLVDSITRFAEAHREVALAGGEAASMRGFPPSTAHTIMALAERAGPGADGTGDITA 307 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 V SVLV G + +P+AD +R +LDGH+V++R +AE GR+P +D L S+SR +A S E Sbjct: 308 VFSVLVAGSDMEEPVADILRGVLDGHVVMDRKIAERGRFPAIDLLRSMSRALPEAASTAE 367 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L++ L+ ++ + G Y G D ++D A+ P + FL + D Sbjct: 368 NALIAEARRLLGAWDRAEMMIQAGLYARGSDPLVDAAIRVWPALDAFLAEDAPD 421 >gi|254462370|ref|ZP_05075786.1| flagellum-specific ATP synthase [Rhodobacterales bacterium HTCC2083] gi|206678959|gb|EDZ43446.1| flagellum-specific ATP synthase [Rhodobacteraceae bacterium HTCC2083] Length = 447 Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 155/412 (37%), Positives = 247/412 (59%), Gaps = 4/412 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG-QVIRINLDIVYICPVGIGEEIS 82 G ++ + + + L Q LGD V + D +G +VI ++ D+ I P +S Sbjct: 23 GTVTHVGAGLIELDGLGQNARLGDQVNLSSRMGDAMGGEVISLSKDVTIIQPDAPLTGVS 82 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 LGD G F+ISPS W GR+++A G P+DG L +G+ I+ P R+ + Sbjct: 83 LGDEALLDGPFQISPSDAWIGRIVDANGGPMDGR-FLPRGETPRSILGAPPNPAQRRALG 141 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + +T + V + P+ GQR+G+F+G G+GKS+LL+ FA D ++I+L+GERGRE+ Sbjct: 142 RRLETSMSVFNTLLPIVRGQRLGLFSGFGVGKSSLLAHFASHMEADVIVIALIGERGREL 201 Query: 203 REFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 R F+E LG + +SV+V ATSD++P+LR+ LTA+++AE+F +G +VL + +SITR Sbjct: 202 RHFVETTLGKKGMARSVIVAATSDQNPLLRRRCALTAMSVAEHFRDQGKHVLFLANSITR 261 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 A + REIA +GE P RG+P S + L ER GP G+ITA+ SVLV + + Sbjct: 262 LAEAHREIAVAAGEAPALRGFPASTSHLIMSLCERAGPGLDGGGDITALFSVLVAASDMD 321 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD +R +LDGH+VL+R++AE GRYP +D + SVSR +A + E +L+++ L+ Sbjct: 322 EPIADIMRGVLDGHVVLDRTIAERGRYPAIDAVRSVSRSLPEAANEKENELIATARRLLG 381 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 ++E + G Y G D +LD A+ + +F+ + L++++ FQ + Sbjct: 382 AYDENALMIRAGLYNAGSDPLLDIAIKAYSELDNFIA-TLERLNTDNSFQRL 432 >gi|312792650|ref|YP_004025573.1| atpase, flii/yscn family [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876500|ref|ZP_07736483.1| flagellar protein export ATPase FliI [Caldicellulosiruptor lactoaceticus 6A] gi|311796711|gb|EFR13057.1| flagellar protein export ATPase FliI [Caldicellulosiruptor lactoaceticus 6A] gi|312179790|gb|ADQ39960.1| ATPase, FliI/YscN family [Caldicellulosiruptor kristjanssonii 177R1B] Length = 431 Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 157/403 (38%), Positives = 242/403 (60%), Gaps = 17/403 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP----VGI-- 77 G+++ + + T+ V +G + ++ L +V+ + V + P VG+ Sbjct: 19 GFVNQVIGL--TIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGVFP 76 Query: 78 GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 G ++ D +F + GR+++ LG+PIDG + K + + ++ P + Sbjct: 77 GCKVIAQDSIFE-----VKVGKELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLE 130 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R R++ GI+ ID + GQR+G+FAGSG+GKSTLL M AR+ D +++L+GE Sbjct: 131 RPRIDTIMPLGIKAIDTLLTIGKGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGE 190 Query: 198 RGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGRE++EF+E D + LK+SVVVVATSDES + R A A+ IAEYF +G +VL ++ Sbjct: 191 RGRELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLM 250 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TRFA + REI GE PV+RGY SVFS +P+LLER G + KG+ITA+ +VLVD Sbjct: 251 DSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSVMPKLLERAG--KNRKGSITALFTVLVD 308 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 GD+ N+PI D+ R ILDGHIVL+R++A + YP +D LAS+SR+ + ++L + Sbjct: 309 GDDFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVDPSHRELANET 368 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 ++ + E D+ IG Y G + +D+A+ +P I FL+Q Sbjct: 369 KRVLAVYREAEDLINIGAYTKGSNPEIDRAIELLPRINQFLRQ 411 >gi|172057885|ref|YP_001814345.1| FliI/YscN family ATPase [Exiguobacterium sibiricum 255-15] gi|171990406|gb|ACB61328.1| ATPase, FliI/YscN family [Exiguobacterium sibiricum 255-15] Length = 437 Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 156/372 (41%), Positives = 233/372 (62%), Gaps = 8/372 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108 +H+G + +V+ V + P G I+ G +V G+ + G V++ Sbjct: 52 IHRGDEIE--AEVVGFREGHVLLMPYGETTAIAPGSIVIATGKPLHVPVGDDLIGTVLDG 109 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG+ +DG SL + I+ K P ++R R+++ TGIR ID + GQR+G+FA Sbjct: 110 LGRSLDGK-SLAHLR-TTSIVRKPPSPLDRPRIDEVLSTGIRAIDGLLTVGQGQRVGLFA 167 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 GSG+GKSTLL M A+ D +I+L+GERGREV+EFIE LG+ + +S++VVATSD+ Sbjct: 168 GSGVGKSTLLGMIAKRSMADINVIALIGERGREVKEFIEAELGEEGMSRSIIVVATSDQP 227 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 P++R TA IAEYF +G NV+L++DS+TRFA + REI +GE P ++GY SVF Sbjct: 228 PLVRLKGAYTATAIAEYFRDQGKNVVLMMDSVTRFAMAQREIGLATGEPPASKGYTPSVF 287 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + LP+LLER G + + G+ITA +VLVDGD+ N+PIAD+VR ILDGH VL+R+LA +G+ Sbjct: 288 ALLPQLLERSGKTTE--GSITAFYTVLVDGDDMNEPIADAVRGILDGHFVLDRNLANKGQ 345 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YP + L S+SR+ ++ S + K + L+ + + D+ IG Y+ G + +D+AV Sbjct: 346 YPAIHILRSISRVMNQITSTEHKDSAITFRQLLSTYLDAEDLINIGAYKSGTNPDIDRAV 405 Query: 408 HQVPIIYDFLKQ 419 + P + FLKQ Sbjct: 406 EKYPELIGFLKQ 417 >gi|255767366|ref|NP_389506.2| flagellum-specific ATP synthase [Bacillus subtilis subsp. subtilis str. 168] gi|238054284|sp|P23445|FLII_BACSU RecName: Full=Flagellum-specific ATP synthase gi|225184993|emb|CAB13497.2| flagellar-specific ATPase [Bacillus subtilis subsp. subtilis str. 168] Length = 438 Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 156/361 (43%), Positives = 218/361 (60%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + + P I+ G +V G R+ G+VI+A G+P+DG L Sbjct: 58 EVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLDGK-LL 116 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 KG + P M R + + G+R ID + GQRIG+FAGSG+GKSTL+ Sbjct: 117 PKGLSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M A+ D +I+LVGERGREVREFIE LG + LK+S+VVVATSD+ ++R A TA Sbjct: 177 MIAKQTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTA 236 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF KG NV+ ++DS+TR A + REI +GE P +GY SVF+ LPRLLER G Sbjct: 237 TAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 296 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 +E G ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S Sbjct: 297 ANEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSIS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + L+ ++ + D+ IG Y+ G +D+A+ P + FLK Sbjct: 355 RVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 414 Query: 419 Q 419 Q Sbjct: 415 Q 415 >gi|312621571|ref|YP_004023184.1| atpase, flii/yscn family [Caldicellulosiruptor kronotskyensis 2002] gi|312202038|gb|ADQ45365.1| ATPase, FliI/YscN family [Caldicellulosiruptor kronotskyensis 2002] Length = 431 Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 156/401 (38%), Positives = 239/401 (59%), Gaps = 13/401 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP----VGIGE 79 G+++ + + T+ V +G + ++ L +V+ + V + P VG+ Sbjct: 19 GFVNQVIGL--TIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGV-- 74 Query: 80 EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 ++ F + GR+++ LG+PIDG + K + + ++ P + R Sbjct: 75 -FPGCKVIAQDSMFEVKVGKELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLERP 132 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R++ GI+ ID + GQR+G+FAGSG+GKSTLL M AR+ D +++L+GERG Sbjct: 133 RIDTIMPLGIKAIDTLLTIGKGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGERG 192 Query: 200 REVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 RE++EF+E D + LK+SVVVVATSDES + R A A+ IAEYF +G +VL ++DS Sbjct: 193 RELKEFLEKDLKEEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLMDS 252 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI GE PV+RGY SVFS +P+LLER G + +KG+ITA+ +VLVDGD Sbjct: 253 LTRFAMAQREIGLAIGEPPVSRGYTPSVFSIMPKLLERAG--KNQKGSITALFTVLVDGD 310 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + N+PI D+ R ILDGHIVL+R++A + YP +D LAS+SR+ + + L + Sbjct: 311 DFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVEPFHRDLANETKR 370 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 ++ + E D+ IG Y G + +D+A+ VP I FL+Q Sbjct: 371 VLAVYREAEDLINIGAYTKGSNPEIDRAIELVPRINQFLRQ 411 >gi|325288781|ref|YP_004264962.1| type III secretion system ATPase, FliI/YscN [Syntrophobotulus glycolicus DSM 8271] gi|324964182|gb|ADY54961.1| type III secretion system ATPase, FliI/YscN [Syntrophobotulus glycolicus DSM 8271] Length = 437 Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 167/415 (40%), Positives = 241/415 (58%), Gaps = 9/415 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G +S +T + + V +G + S+ +V+ + + P+G E +S Sbjct: 21 GLVSKVTGLL--IEANGPKVSVGRYCCIVSSKSEIPAEVVGFKDNKTLLMPLGELEGVSP 78 Query: 84 GDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 GD V + + + GRV++ LG P++G K ++ + + P A+ R RV Sbjct: 79 GDKVIPQKEKLAVKVGSELLGRVLDGLGNPLEGRPL--KSNIDYPLQNAPPHALLRPRVS 136 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + G+R +D + GQR+G+FAGSG+GKSTLL M AR+ D +I+LVGERGRE+ Sbjct: 137 EPLSVGVRSVDGLLTIGRGQRMGIFAGSGVGKSTLLGMMARNTQADINVIALVGERGREL 196 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 REFIE LG + + +SV+VVATSD+ ++R A TA IAEYF G NVLL++DS+TR Sbjct: 197 REFIEKDLGPEGISRSVIVVATSDQPALVRIKAAFTATAIAEYFRDTGKNVLLMMDSVTR 256 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + RE+ GE P RGYP SVF+ LP+LLER G + EKG+IT + +VLVDGD+HN Sbjct: 257 FAMAQREVGLTIGEPPATRGYPPSVFAMLPKLLERAGMA--EKGSITGLYTVLVDGDDHN 314 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD+VR ILDGHIVL+R LA +P +D L SVSR + L + L+ Sbjct: 315 EPIADAVRGILDGHIVLSRDLAARNHFPSIDILQSVSRCMSDVAEPEMIGLAGKVRELLA 374 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITK 435 ++ +D+ IG Y G + +D A+ + I FL QS + + D+ EI K Sbjct: 375 VYQGAKDLIDIGAYVRGSNAKIDTALKYMEKITLFLCQSTDEKFNGIDMVAEIKK 429 >gi|322806989|emb|CBZ04559.1| flagellum-specific ATP synthase FliI [Clostridium botulinum H04402 065] Length = 438 Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 166/392 (42%), Positives = 237/392 (60%), Gaps = 9/392 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 +++ KN +V+ + V + P+G I+ G V G+ + S G+V++ Sbjct: 49 IIYNEKNQTIPCEVVGFKEENVILMPLGELIGIAPGCKVIPQGKPLSVICSENILGKVLD 108 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P++G++ + +++ S P M R+R++ TGI+ ID F + GQRIG+F Sbjct: 109 GLGNPLEGEELMEGSPYALD--SDPPDPMKRRRIKDVIPTGIKAIDGFITVGEGQRIGIF 166 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKST L M A+ D +I+L+GERGREVR+FIE LG+ LKKSV+V ATSD+ Sbjct: 167 AGSGVGKSTTLGMIAKYAEADINVIALIGERGREVRDFIEKDLGEEGLKKSVIVCATSDK 226 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R TA IAEYF +G V+L++DS+TRFA + REI GE P +GY SV Sbjct: 227 PALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSV 286 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F++LPRL+ER G S K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RSLA + Sbjct: 287 FAKLPRLMERSGMSNK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRSLAAKN 344 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L+SVSRL + S + K L+ ++ + D+ IG Y + +D A Sbjct: 345 HYPAIDVLSSVSRLMSEIASKEHKDAAGMARDLLATYKNSEDLINIGAYVKRSNPKVDMA 404 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +H I FLKQ + + F+E T LQ Sbjct: 405 IHYHESILSFLKQG---IGEQHSFEESTSILQ 433 >gi|57505593|ref|ZP_00371520.1| flagellum-specific ATP synthase [Campylobacter upsaliensis RM3195] gi|57016140|gb|EAL52927.1| flagellum-specific ATP synthase [Campylobacter upsaliensis RM3195] Length = 450 Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 166/422 (39%), Positives = 237/422 (56%), Gaps = 10/422 (2%) Query: 4 NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV---VHQGKNSDNLG 60 +LE L + +D +NL G I+ I++ + L V GD V ++ +N L Sbjct: 2 SLEKLRKKLKD--ENLASVFGEITKISATNIEIQGLKTGV--GDIVRLISNENENLQTLA 57 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSL 119 V+ + Y+ P E +GD F +I S GRV++ KP DG ++ Sbjct: 58 MVVEVKAQFSYLSPFSFIEGFKIGDRAFLSDAGMQIGVSDALLGRVVDPFMKPKDGKGAI 117 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 M IM AM R +E+ F TG++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 118 EISKF-MPIMRSPIDAMKRGLIEEIFPTGVKTIDGLLTCGVGQKLGIFAGSGVGKSTLMG 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239 M ++ +I+L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A+ Sbjct: 177 MIVKNSKAPVKVIALIGERGREIPEFIQKNLGGKLDNTVIIVATSDDSALMRKYGAFCAM 236 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 ++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 237 SVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG- 295 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S SR Sbjct: 296 KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASR 355 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + S K L +E + IG Y+ G D LD+A+ + ++ FL Q Sbjct: 356 VMSDIISDTHKNNARKFKRLSSLLKENEVLLRIGAYQKGSDKELDEAIMKKDLMQKFLSQ 415 Query: 420 SP 421 +P Sbjct: 416 TP 417 >gi|29423534|gb|AAO73596.1| lateral flagellar FliI-like assembly ATPase protein [Vibrio parahaemolyticus] Length = 451 Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 146/367 (39%), Positives = 227/367 (61%), Gaps = 5/367 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + + Y+ P+ +G + ++ G + S+ W GRV+N LG+P+D Sbjct: 68 AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWMGRVVNGLGEPLDDGMP 127 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 128 LKGGDRVSLEPKPINP--LKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 185 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREFIE L + K++++ A +DESP++R A L Sbjct: 186 MGMITKNTEADVIVVGLIGERGREVREFIERNLTPEAREKAIIIAAPADESPLMRLRATL 245 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AEYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 246 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 305 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE G++TA+ +VL +GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS Sbjct: 306 AGNSENPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 365 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + ++ + + + +++ +GGY+PG D LD++V P + + Sbjct: 366 ISRCMSTCTQPAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRSY 425 Query: 417 LKQSPSD 423 L+QS ++ Sbjct: 426 LQQSANE 432 >gi|225871930|ref|YP_002753384.1| flagellar protein export ATPase FliI [Acidobacterium capsulatum ATCC 51196] gi|225793979|gb|ACO34069.1| flagellar protein export ATPase FliI [Acidobacterium capsulatum ATCC 51196] Length = 450 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 153/351 (43%), Positives = 220/351 (62%), Gaps = 11/351 (3%) Query: 74 PVGIGEEISLGDLVFHWGRFRISPS----ACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129 PV I GD V G + PS GRV+NALG+P+D SL D ++ + Sbjct: 82 PVESSSGIRYGDTVAALG---VQPSIDVGEGLIGRVLNALGQPLDRAGSLRATD-ALPLE 137 Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189 VP ++R + TGIR ID + GQR+G+F GSG+GKSTL+ M R+ D Sbjct: 138 RAVPHPLDRTPIRMPLGTGIRAIDSMLTVGRGQRVGIFGGSGVGKSTLIGMMTRNSDADV 197 Query: 190 VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248 +++ LVGERGREV EF+ED LG + K+SVVVV+TSD++P+LR A L A T+AEYF+ + Sbjct: 198 IVVGLVGERGREVGEFLEDSLGPEGRKRSVVVVSTSDQTPLLRMRAALAATTVAEYFADQ 257 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 G +VLL+LDS+TRFA + RE+ +GE P A+GY SVFS L +L+ER G + +G+IT Sbjct: 258 GKHVLLVLDSLTRFAMAAREVGLAAGEPPTAKGYTPSVFSRLAQLVERAG--QFREGSIT 315 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 A +VL++GD+ D + D+VRS LDGH+VL+R+LA +G YPP++ L S+SRL S + Sbjct: 316 AFYTVLMEGDDQQDTLVDAVRSYLDGHVVLSRTLASQGWYPPIELLDSISRLMPSVASGE 375 Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +++ ++ + + D+ IG Y+ G D LD A+ + FL Q Sbjct: 376 HRGAAATVRRMLAAYARSEDLVRIGAYKAGTDPELDDALRTREAVRAFLMQ 426 >gi|91223214|ref|ZP_01258480.1| putative flagellum-specific ATP synthase [Vibrio alginolyticus 12G01] gi|91192027|gb|EAS78290.1| putative flagellum-specific ATP synthase [Vibrio alginolyticus 12G01] Length = 448 Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 146/367 (39%), Positives = 229/367 (62%), Gaps = 5/367 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ I Y+ P+ +G + ++ G + S+ W GRV+N LG+P+D Sbjct: 66 AQVVGFEHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVLNGLGEPLDDGAP 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREFIE L + KK++++ A +DESP++R A L Sbjct: 184 MGMITKNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 ++EYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 244 LCHRVSEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE + G++TA+ +VL +GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS Sbjct: 304 AGNSENQHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + ++ + + + +++ +GGY+PG D LD++V P + + Sbjct: 364 ISRCMNTCTQDAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVAMYPNLRAY 423 Query: 417 LKQSPSD 423 L+Q+ ++ Sbjct: 424 LQQAANE 430 >gi|28901388|ref|NP_801043.1| putative flagellum-specific ATP synthase [Vibrio parahaemolyticus RIMD 2210633] gi|260362942|ref|ZP_05775811.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus K5030] gi|260880229|ref|ZP_05892584.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus AN-5034] gi|260895346|ref|ZP_05903842.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus Peru-466] gi|260901171|ref|ZP_05909566.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus AQ4037] gi|28809935|dbj|BAC62876.1| putative flagellum-specific ATP synthase [Vibrio parahaemolyticus RIMD 2210633] gi|308085703|gb|EFO35398.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus Peru-466] gi|308091672|gb|EFO41367.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus AN-5034] gi|308109341|gb|EFO46881.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus AQ4037] gi|308112402|gb|EFO49942.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus K5030] gi|328469322|gb|EGF40268.1| putative flagellum-specific ATP synthase [Vibrio parahaemolyticus 10329] Length = 449 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 146/367 (39%), Positives = 227/367 (61%), Gaps = 5/367 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + + Y+ P+ +G + ++ G + S+ W GRV+N LG+P+D Sbjct: 66 AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWMGRVVNGLGEPLDDGMP 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREFIE L + K++++ A +DESP++R A L Sbjct: 184 MGMITKNTEADVIVVGLIGERGREVREFIERNLTPEAREKAIIIAAPADESPLMRLRATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AEYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE G++TA+ +VL +GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS Sbjct: 304 AGNSENPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + ++ + + + +++ +GGY+PG D LD++V P + + Sbjct: 364 ISRCMSTCTQPAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRSY 423 Query: 417 LKQSPSD 423 L+QS ++ Sbjct: 424 LQQSANE 430 >gi|170738290|ref|YP_001779550.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia cenocepacia MC0-3] gi|169820478|gb|ACA95060.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia cenocepacia MC0-3] Length = 449 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 158/427 (37%), Positives = 250/427 (58%), Gaps = 6/427 (1%) Query: 14 DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYIC 73 D + +L +G + ++ ++ +Y L + QG+ +V+ + D + Sbjct: 26 DRAAHLSTRGKVMDALGTLIRVSGIDVRYGELCELRTGQGELM-QCAEVVGFSRDTALLS 84 Query: 74 PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132 P G + +S V R I + GRV++++G+PIDG + + + + + Sbjct: 85 PFGRLDGLSRDTQVVALRRPLAIPVGSALFGRVVDSMGRPIDGRGPIDTTE-TAALYAAP 143 Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P AM+R +E+ TG+RV+D L GQR+G+FA +G+GKSTL+ MFAR D +I Sbjct: 144 PDAMSRPLLERSLDTGVRVVDGLMTLGEGQRVGIFAPAGVGKSTLMGMFARGTRCDLNVI 203 Query: 193 SLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREVREFIE LG + + +S+VV ATSD S I R A +A IAEYF +G Sbjct: 204 ALIGERGREVREFIEQILGPEGIARSIVVCATSDRSSIERVKAAYSATAIAEYFRDRGKR 263 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 VLL++DS+TRFA + REI +GE P RG+P S+F+ELPRLLER G S E G+ITA+ Sbjct: 264 VLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGLS--EHGSITALY 321 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL + ++ +DP+A+ VR ILDGH++L+R +A +YP +D LAS+SR+ + ++ Sbjct: 322 TVLAEDESGSDPVAEEVRGILDGHMILSREIAARNQYPAIDVLASLSRVMPQVTDDAHRE 381 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431 + L+ + + + +G YR G D + D+AV ++ I FL Q + S+ + + Sbjct: 382 AAGHVRRLLAKHRDIETLLQLGEYRAGGDPVADEAVRKIEAIRQFLCQRTDEFSTREATR 441 Query: 432 EITKKLQ 438 + + L+ Sbjct: 442 DALRGLR 448 >gi|258404705|ref|YP_003197447.1| flagellar protein export ATPase FliI [Desulfohalobium retbaense DSM 5692] gi|257796932|gb|ACV67869.1| flagellar protein export ATPase FliI [Desulfohalobium retbaense DSM 5692] Length = 435 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 159/404 (39%), Positives = 244/404 (60%), Gaps = 16/404 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G +++I V C + V +G +V +G S +V+ + + P+G + Sbjct: 20 GKVTNIVGVLVQGYCPN--VSVGSLCEIVPEGGESPVQAEVVGFRDAMALLMPLGELRGL 77 Query: 82 SLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAM 136 + G+L+ P GRV++A+G PIDG KG LS+ I ++ P M Sbjct: 78 APGNLIKVLDSSATLPVGEDMLGRVLDAMGYPIDG-----KGPLSLPRSRMIYAQPPGPM 132 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R ++ G+ I+ GQR+ + AGSG+GKSTL+ M AR +I+L+G Sbjct: 133 ERAQISVPLDVGVSSINGLLTCGLGQRLAIMAGSGVGKSTLMGMIARDSKASINVIALIG 192 Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE+ LG + LK+SVV+VATSD+SP+LR A +AE+F+ +G++V+LI Sbjct: 193 ERGREVREFIENDLGPEGLKRSVVIVATSDQSPVLRMRGAFAATAVAEHFADQGEDVMLI 252 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TR+A + REI GE P +GYP SVF++LP+ LER G + K+ G+IT + +VLV Sbjct: 253 MDSVTRYAMANREIGLAVGEPPTTKGYPPSVFAKLPKFLERAG-NFKKGGSITGLYTVLV 311 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 +GD+ N+P+AD+VRSILDGHIVL+R LA + YPP+D L S SRL + + + + Sbjct: 312 EGDDMNEPVADTVRSILDGHIVLDRRLANKNHYPPIDVLQSASRLMRQVVDEEHLQYSAQ 371 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +++ + E+ D+ IG Y PG + LD A++++ + +FL Q Sbjct: 372 IQNVLATYRESEDLVTIGAYTPGTNRALDDALNRIESVNEFLTQ 415 >gi|291562024|emb|CBL40839.1| type III secretion system ATPase, FliI/YscN [butyrate-producing bacterium SS3/4] Length = 433 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 151/345 (43%), Positives = 221/345 (64%), Gaps = 5/345 (1%) Query: 81 ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 I+ G V + G R +I GR+INALG PID G L + + P +NR Sbjct: 76 ITAGSFVRNTGCRLQIPVGDFLKGRIINALGHPIDEKGEFPPGKLYTVDSAYINP-LNRP 134 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 + + + GI+ ID + GQR+G+FAGSG+GKSTL+ M AR+ D +I+LVGERG Sbjct: 135 PIREHLEFGIKAIDGLNTIGKGQRMGIFAGSGVGKSTLMGMIARNVKTDINVIALVGERG 194 Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REV EF++ LG+ +K+SV++VATSD+ +LR PL A TIAEYF +G +VLL++DS Sbjct: 195 REVLEFVKKDLGEEGMKRSVLIVATSDQPAMLRMKCPLVATTIAEYFRDQGADVLLMMDS 254 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TR+A + REI GE P+ARGY S+++E PRLLER G KG+IT + +VLV+GD Sbjct: 255 LTRYAMAQREIGLAIGEPPIARGYTPSIYAEFPRLLERSG--NFAKGSITGIYTVLVEGD 312 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + N+P+AD+VR ILDGHIVL+R LA +P +D AS+SRL + + +K S + Sbjct: 313 DTNEPVADTVRGILDGHIVLSRQLANANHFPAIDISASISRLMNDIAGEEHRKAASRFRN 372 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 ++ +++ D+ IG Y+ G + LD+AV ++ + FL+Q ++ Sbjct: 373 MLSLYQKNADLISIGAYKKGANSALDEAVDRIGDMNKFLEQETNE 417 >gi|153835939|ref|ZP_01988606.1| FliIL [Vibrio parahaemolyticus AQ3810] gi|149750693|gb|EDM61438.1| FliIL [Vibrio parahaemolyticus AQ3810] Length = 449 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 146/367 (39%), Positives = 227/367 (61%), Gaps = 5/367 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + + Y+ P+ +G + ++ G + S+ W GRV+N LG+P+D Sbjct: 66 AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWMGRVVNGLGEPLDDGIP 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREFIE L + K++++ A +DESP++R A L Sbjct: 184 MGMITKNTEADVIVVGLIGERGREVREFIERNLTPEAREKAIIIAAPADESPLMRLRATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AEYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE G++TA+ +VL +GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS Sbjct: 304 AGNSENPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + ++ + + + +++ +GGY+PG D LD++V P + + Sbjct: 364 ISRCMSTCTQPAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRSY 423 Query: 417 LKQSPSD 423 L+QS ++ Sbjct: 424 LQQSANE 430 >gi|315639098|ref|ZP_07894265.1| flagellum-specific ATP synthase FliI [Campylobacter upsaliensis JV21] gi|315480802|gb|EFU71439.1| flagellum-specific ATP synthase FliI [Campylobacter upsaliensis JV21] Length = 452 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 166/422 (39%), Positives = 237/422 (56%), Gaps = 10/422 (2%) Query: 4 NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV---VHQGKNSDNLG 60 +LE L + +D +NL G I+ I++ + L V GD V ++ +N L Sbjct: 2 SLEKLRKKLKD--ENLASVFGEITKISATNIEIQGLKTGV--GDIVRLISNENENLQTLA 57 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSL 119 V+ + Y+ P E +GD F +I S GRV++ KP DG ++ Sbjct: 58 MVVEVKAQFSYLSPFSFIEGFKIGDKAFLSDAGMQIGVSDALLGRVVDPFMKPKDGKGAI 117 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 M IM AM R +E+ F TG++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 118 EISKF-MPIMRSPIDAMKRGLIEEIFPTGVKTIDGLLTCGVGQKLGIFAGSGVGKSTLMG 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239 M ++ +I+L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A+ Sbjct: 177 MIVKNSKAPVKVIALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCAM 236 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 ++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 237 SVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG- 295 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S SR Sbjct: 296 KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSASR 355 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + S K L +E + IG Y+ G D LD+A+ + ++ FL Q Sbjct: 356 VMSDIISDTHKNNARKFKRLSSLLKENEVLLRIGAYQKGSDKELDEAIMKKDLMQKFLSQ 415 Query: 420 SP 421 +P Sbjct: 416 TP 417 >gi|152997448|ref|YP_001342283.1| flagellar protein export ATPase FliI [Marinomonas sp. MWYL1] gi|150838372|gb|ABR72348.1| flagellar protein export ATPase FliI [Marinomonas sp. MWYL1] Length = 443 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 161/392 (41%), Positives = 234/392 (59%), Gaps = 4/392 (1%) Query: 32 VYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW 90 V T+ + V LGD V K+ +V+ D+ Y+ P E IS G V Sbjct: 31 VGLTMEAVGCVVALGDRCSVQVRKDRWVESEVVGFTGDLTYLMPTEAIEGISPGARVRPL 90 Query: 91 -GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 G ++ GRV+N LGKP+DG + D S+ + V + R+ + + GI Sbjct: 91 LGDSKMPVGDELLGRVVNGLGKPLDGKGPIKTKD-SVTLHGNVINPLQRKPISEPLDVGI 149 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 + I+ + GQR+G+FAGSG+GKS LL M + D ++ L+GERGREV+EFI+ Sbjct: 150 KAINSLLTVGKGQRLGLFAGSGVGKSMLLGMMTKFTEADITVVGLIGERGREVKEFIDQI 209 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG+ L +SVVV + +D+S ++R A + A IAEY+ +G NVLL++DS+TR+A + RE Sbjct: 210 LGEEGLSRSVVVASPADDSALMRLRAAMLATRIAEYYRDQGKNVLLLMDSLTRYAQAQRE 269 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 IA + GE P +GYP SVFS+LP+L+ER G + G++TA +VL +GD+ DPIAD+ Sbjct: 270 IALSVGEPPATKGYPPSVFSKLPQLVERAGNGCEGSGSVTAFYTVLTEGDDQQDPIADAS 329 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R+ILDGHIVL+R LAEEG YP +D AS+SR S D + L +F++ +D Sbjct: 330 RAILDGHIVLSRRLAEEGHYPAIDIEASISRAMPHIVSEDHLYGAMRVKQLYSKFQQNQD 389 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + +G Y G D LD+A+ Q+P I +FL+QS Sbjct: 390 LISVGAYARGSDPDLDQAIIQMPEIRNFLQQS 421 >gi|292669729|ref|ZP_06603155.1| flagellar protein export ATPase FliI [Selenomonas noxia ATCC 43541] gi|292648526|gb|EFF66498.1| flagellar protein export ATPase FliI [Selenomonas noxia ATCC 43541] Length = 461 Score = 279 bits (713), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 164/373 (43%), Positives = 228/373 (61%), Gaps = 14/373 (3%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME- 127 V + PVG + I G V GR R+ GRV++ LG PIDG + L+ E Sbjct: 80 VLLMPVGEMQGIGPGCEVIATGRRLRVKVGEELLGRVLDGLGNPIDGKGPI----LAQEE 135 Query: 128 --IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185 + + PP + R R+ G+R ID L GQRIG+ AGSG+GKSTLLSM AR+ Sbjct: 136 YPLQAPPPPPLTRPRIHDNLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNT 195 Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244 D +I+LVGERGREVR+FIE LG + LK+SVVVVATSD+ ++R +T IAEY Sbjct: 196 EADISVITLVGERGREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEY 255 Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 F +G V+L++DS+TRFA + RE+ GE P RGY SVF+ LPRLLER G S E+ Sbjct: 256 FRDQGHKVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTS--ER 313 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R +A + +P +D L SVSR+ + Sbjct: 314 GSITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLGSVSRVMYEV 373 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424 + + L+ + E D+ IG Y G +D A+ ++ I +FL+Q ++ Sbjct: 374 VDKSHLEAAQEMRQLMAVYAEAEDLIHIGAYVKGSSPKIDAAIQKIDGINEFLRQDIYEV 433 Query: 425 SSEDVFQEITKKL 437 +S ++E ++L Sbjct: 434 TS---YEETEQQL 443 >gi|303240285|ref|ZP_07326804.1| flagellar protein export ATPase FliI [Acetivibrio cellulolyticus CD2] gi|302592195|gb|EFL61924.1| flagellar protein export ATPase FliI [Acetivibrio cellulolyticus CD2] Length = 438 Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 159/370 (42%), Positives = 223/370 (60%), Gaps = 13/370 (3%) Query: 70 VYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G I G V G + + C GRVI+ LG PIDG KGDL +E Sbjct: 69 VILMPLGDMTGIGPGSTVVATGEYLSAAVGNCMVGRVIDGLGNPIDG-----KGDLKVET 123 Query: 129 MSKV----PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 V P + R R+ G++ ID + GQR+G+FAGSG+GKSTL+ M AR+ Sbjct: 124 SYPVNNDPPHPLMRNRINDPLPLGVKTIDGLLTIGKGQRVGIFAGSGVGKSTLIGMIARN 183 Query: 185 DCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D +I+L+GERGREVREFIE D + L +SVVVVATSD+ ++R A IAE Sbjct: 184 TKADINVIALIGERGREVREFIEKDLKEEGLSRSVVVVATSDQPALVRLKGAFIATAIAE 243 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 YF +G +VLL++DS+TRFA + REI GE PV+RGY SVFS +P+LLER G S + Sbjct: 244 YFRDQGKDVLLLMDSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSSMPKLLERAGNS--Q 301 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT + +VLVDGD+ +P+ D+ R ILDGHIVL+R+LA +YP +D LASVSR+ Sbjct: 302 SGSITGLYTVLVDGDDLTEPVTDTARGILDGHIVLSRALANRNQYPAIDVLASVSRVMSD 361 Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 +++ KK+ + + ++ + D+ IG Y G + +D A+ + I +F++Q D Sbjct: 362 IVTSEHKKIANQMKKVMAIHRDAEDLINIGAYVKGSNEKIDYAIAHIDKILEFIEQGTHD 421 Query: 424 LSSEDVFQEI 433 S D E+ Sbjct: 422 NYSFDEVVEL 431 >gi|91200226|emb|CAJ73270.1| strongly similar to flagellar ATPase fliI [Candidatus Kuenenia stuttgartiensis] Length = 439 Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 156/374 (41%), Positives = 229/374 (61%), Gaps = 16/374 (4%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME- 127 + + P+G E I G+ V G + GR++ LG+P+DG KG L++E Sbjct: 71 ILLMPIGELERIGPGNRVTASGSPLTVGVGMGLMGRILGGLGEPMDG-----KGPLNVEE 125 Query: 128 ---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 I + P + R R+++ +TG+R ID GQR+G+FAGSG+GKSTL+ M AR+ Sbjct: 126 RVSIYNSPPDPLTRSRIKEVLETGVRAIDGMLTFGQGQRLGIFAGSGVGKSTLMGMIARN 185 Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + +I+L+GERGREVREF+E LG + +KKSV+V TSD+ +LR A +IAE Sbjct: 186 SGAEVNVIALIGERGREVREFVEKNLGEEGMKKSVIVSVTSDKPALLRVKGAYIASSIAE 245 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 YF +G VLL++DS+TRFA++ REI GE P ++GY SVF+ LP+LLER G Sbjct: 246 YFRDRGMRVLLMMDSVTRFANAQREIGLAIGEPPTSKGYTPSVFALLPKLLERSGTG--T 303 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 KG+IT + +VLVDGD+ N+PIAD+VR ILDGH+VL+R++A + YP +D + SVSR D Sbjct: 304 KGSITGLYTVLVDGDDMNEPIADAVRGILDGHVVLSRAMASQNHYPAIDIMESVSRCMDD 363 Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 + + +K L + ++E D+ IG Y G + +D A+ + I ++LKQ D Sbjct: 364 IITGEHRKAAQMLKAVYATYKEAEDMINIGAYAKGGNKKIDYALSVIDAINEYLKQ---D 420 Query: 424 LSSEDVFQEITKKL 437 +++ F E KL Sbjct: 421 MTTNGNFNESISKL 434 >gi|254486056|ref|ZP_05099261.1| flagellum-specific ATP synthase [Roseobacter sp. GAI101] gi|214042925|gb|EEB83563.1| flagellum-specific ATP synthase [Roseobacter sp. GAI101] Length = 445 Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 156/390 (40%), Positives = 234/390 (60%), Gaps = 3/390 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G I+ + V+ L CLGD V + + SD G++++++ I+ + ++ Sbjct: 24 GRITLVDQGAVQVSGLGTEACLGDRVKIRRRSGSDLFGEIVQLDGTILTALLENAPDGVA 83 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 + D VF I PS W GRVI++ G P+DG L G + + + P A R+ + Sbjct: 84 VHDRVFLASAGEIFPSPQWIGRVIDSSGHPLDGK-PLPCGPQAQPLRASPPGAAERKPLG 142 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + +TG+ + + P+ GQR+G+FAGSGIGKSTLL A D V+I++VGERGREV Sbjct: 143 QRLETGLEITNTLLPIVEGQRVGLFAGSGIGKSTLLGTLASKMQADVVVIAMVGERGREV 202 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 R FI+D LG + L ++VVV ATSD+S +LR+ TA+ +AE+F +G +VL + DS+TR Sbjct: 203 RHFIDDVLGPEGLARTVVVAATSDQSALLRRRCAWTAMAVAEFFRDQGKSVLFLADSVTR 262 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + REIA +SGE PV RGYP S + +L ER GP +GNIT + SVLV G + + Sbjct: 263 FAEAHREIAVSSGEAPVLRGYPPSTAHMIMQLCERAGPGHLGQGNITGLFSVLVAGSDMD 322 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD +R +LDGHI+L+R++AE GR+P +D L SVSR A + E K++ + ++ Sbjct: 323 EPIADILRGVLDGHIILDRAIAERGRFPAIDVLRSVSRSLPAAATEGENKILKQVRKILG 382 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 +E + G Y G D +D+++ P Sbjct: 383 VYERNSMMISAGLYTSGSDPEIDQSIALWP 412 >gi|192362186|ref|YP_001982194.1| flagellum-specific ATP synthase [Cellvibrio japonicus Ueda107] gi|190688351|gb|ACE86029.1| flagellum-specific ATP synthase FliI [Cellvibrio japonicus Ueda107] Length = 476 Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 152/373 (40%), Positives = 227/373 (60%), Gaps = 12/373 (3%) Query: 55 NSDNL---GQVIRINLDIVYICPVGIGEEISLGDLVF----HWGRFRISPSACWCGRVIN 107 NSDN +V+ D V++ PV E + G V G RI P GRVIN Sbjct: 69 NSDNRRIEAEVVGFAGDKVFLMPVKRVEGLQPGARVIPVAGQMG-MRIGPQ--LLGRVIN 125 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 +G+P+D L GD ++ + + R + + G+R I+ + GQR+G+F Sbjct: 126 GIGQPLDAKGPLA-GDEYLDFNPRDINPLQRHPISETLDVGVRAINALITVGRGQRLGLF 184 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 AGSG+GKS L+ M + D V++ L+GERGREV+EFI+ LG+ L+++VVV + +D+ Sbjct: 185 AGSGVGKSVLMGMMTKFTTADIVVVGLIGERGREVKEFIDHILGEEGLRRAVVVASPADD 244 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 +P++R A L A IAEY+ +G NVLL++DS+TRFA + REIA GE P +GYP SV Sbjct: 245 APLMRLRASLLASRIAEYYRDQGQNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSV 304 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F+++P+L+ER G + + +G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R LAEEG Sbjct: 305 FAKIPQLVERAGNAAEGEGSITAFYTVLTEGDDLQDPIADSARAILDGHVVLSRRLAEEG 364 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D +S+SR + K++ L+ R+++ RD+ IG Y G D D A Sbjct: 365 VYPAIDVESSISRAMQNIVDDEHLKMMQRFKQLLARYQQNRDLIAIGAYTQGADPETDAA 424 Query: 407 VHQVPIIYDFLKQ 419 + + P + F++Q Sbjct: 425 IERFPHLRAFIQQ 437 >gi|224825759|ref|ZP_03698863.1| ATPase, FliI/YscN family [Lutiella nitroferrum 2002] gi|224601983|gb|EEG08162.1| ATPase, FliI/YscN family [Lutiella nitroferrum 2002] Length = 436 Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 159/367 (43%), Positives = 223/367 (60%), Gaps = 16/367 (4%) Query: 61 QVIRINLDIVYICP----VGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116 QV+ ++ Y+ P VG+ + G F I PS W GR++N LG+P+DG Sbjct: 57 QVVGFKREVSYLMPFKKPVGLTTGARVQPAPDAAGLF-IGPS--WLGRIVNGLGEPLDGL 113 Query: 117 DSLGKGDLSMEIMSKVPPAMN--RQR-VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 LG ++ PP +N R+R V+ G+R I+ L GQR+G+FAGSG+G Sbjct: 114 GRLG----GEHPLAAHPPRVNPLRKRPVDTPLDVGVRAINGLLTLGRGQRVGLFAGSGVG 169 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232 KS LL M R D V++ L+GERGREVREF+E LG + L K+V+VVA +DESP++R Sbjct: 170 KSVLLGMITRHTEADVVVVGLIGERGREVREFVEHALGAEGLAKAVLVVAPADESPLMRL 229 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A TIA +F +G +VLL++DS+TR+A + RE+A GE P RGYP SVF LP Sbjct: 230 KATELTHTIAAHFRDQGRHVLLLVDSLTRYAMAQREVALALGEPPATRGYPPSVFGLLPT 289 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 L E G E E G+++A+ +VL +GD+ DP+ D+ R+ILDGHIVL+R LAE G YP +D Sbjct: 290 LAESAGNGEGE-GSMSAIYTVLAEGDDQQDPVVDTARAILDGHIVLSRGLAERGHYPAID 348 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 ASVSR +++ +L L R++E R + +GGY PG D D+AV ++P+ Sbjct: 349 IAASVSRCMGLVAGVSQREAARTLRGLWARYQEVRALIPLGGYVPGADAETDRAVQRMPL 408 Query: 413 IYDFLKQ 419 I FL+Q Sbjct: 409 IERFLRQ 415 >gi|325109015|ref|YP_004270083.1| type III secretion system ATPase, FliI/YscN [Planctomyces brasiliensis DSM 5305] gi|324969283|gb|ADY60061.1| type III secretion system ATPase, FliI/YscN [Planctomyces brasiliensis DSM 5305] Length = 442 Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 164/379 (43%), Positives = 234/379 (61%), Gaps = 13/379 (3%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD---LVFHWGRFRISPSACWCGRVI 106 + G+ +VI + D + + P G I GD LV R R+ GRVI Sbjct: 47 IEAGQRQGIDAEVIGLEDDEIILQPYGELAGIKRGDTVRLVHSAQRIRVGDR--LLGRVI 104 Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 NA G+ IDGD + M + + P + R R+ + +TG+R ID GQR+G+ Sbjct: 105 NARGEFIDGDLPPVLPESLMLQNAPIAP-LQRPRITERLETGVRAIDSLLTCGQGQRLGI 163 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 FAGSG+GKSTLL AR D ++ LVGERGREVREF+E LG+ ++SV+VVATS+ Sbjct: 164 FAGSGVGKSTLLGQLARYASADVNVVVLVGERGREVREFLERDLGEEGRRRSVLVVATSE 223 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 ES +LR+ +AEYF +G NVLL++DS+TR+A + REI +GE P RGYP S Sbjct: 224 ESALLRRQCANVGTAVAEYFRDQGKNVLLMMDSVTRYALAQREIGLAAGEPPATRGYPPS 283 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VF+ LPRLLER G E+G+IT + +VLV+GD+ N+PIAD+VR ILDGHIVL+R LA + Sbjct: 284 VFALLPRLLERSG--RTERGSITGLYTVLVEGDDTNEPIADTVRGILDGHIVLSRDLAHK 341 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETRDIRLIGGYRPGVDLIL 403 +P +D L S+SRL ++ ADE L ++ L L+ + ++ D+ IG Y+ G + ++ Sbjct: 342 AHWPAIDILGSISRLMNEL--ADETHLAAARQLKQLMAAYRQSEDLINIGAYQHGSNRVV 399 Query: 404 DKAVHQVPIIYDFLKQSPS 422 D+A+ P I +FL+Q+ + Sbjct: 400 DRAIQLKPRIDEFLQQTST 418 >gi|307722059|ref|YP_003893199.1| flagellar protein export ATPase FliI [Sulfurimonas autotrophica DSM 16294] gi|306980152|gb|ADN10187.1| flagellar protein export ATPase FliI [Sulfurimonas autotrophica DSM 16294] Length = 435 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 165/425 (38%), Positives = 240/425 (56%), Gaps = 10/425 (2%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYIC 73 +KN V G + I + T L +V + D V V + +G V I+ D+ +I Sbjct: 12 NKNYSVSFGEVVKINATIITAKGL--HVSISDMVKIVSDTTGQETVGMVTEIDADLFFIT 69 Query: 74 PVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132 P E GD VF I GRV++ +PIDG S+ L+ I + + Sbjct: 70 PFSFVEGFRSGDKVFLDATGLNIPVGPALLGRVVDPFMRPIDGKGSVKDAKLAPIIKAPI 129 Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 AM R +++ F G++ ID GQ++G+FAGSG+GKSTL+ M R ++ Sbjct: 130 A-AMKRGMIDEVFSVGVKSIDGLLSCGKGQKLGIFAGSGVGKSTLMGMIVRGADAPIKVV 188 Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252 +L+GERGREV EFIE LG +L +V+VVATSD+SP++RK A+++AEYF +G +V Sbjct: 189 ALIGERGREVPEFIEKNLGGDLTNTVIVVATSDDSPLMRKYGAFAAMSVAEYFKDQGRDV 248 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 L I+DS+TRFA + REI GE P ++GYP S + LP+L+ER G E+ KG+ITA + Sbjct: 249 LFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-KEEGKGSITAFFT 307 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 VL++GD+ +DPIAD RSILDGHIVL+R + + G YPPV L S SR+ + K Sbjct: 308 VLIEGDDMSDPIADQSRSILDGHIVLSREMTDFGIYPPVHILNSASRVMSDIITPQHLKA 367 Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 V L +E + IG Y G D LD+A+++ + F+ Q+ + +S F E Sbjct: 368 VMKFRRLYTLLKENETLIRIGAYTQGSDAELDEAINKKEDMEAFITQNSTVQTS---FSE 424 Query: 433 ITKKL 437 ++ L Sbjct: 425 TSQAL 429 >gi|153831717|ref|ZP_01984384.1| FliIL [Vibrio harveyi HY01] gi|148872227|gb|EDL71044.1| FliIL [Vibrio harveyi HY01] Length = 449 Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 228/367 (62%), Gaps = 5/367 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + + Y+ P+ +G + ++ G + S+ W GRV+N LG+P D Sbjct: 66 AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVVNGLGEPFDDGAP 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LKGGDRVSLEPKPINP--LKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREF+E L + KK+++V A +DESP++R A L Sbjct: 184 MGMITQNTEADVIVVGLIGERGREVREFVERNLTPEARKKAIIVAAPADESPLMRLRATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AEYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S+ G++TA+ +VL +GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS Sbjct: 304 AGNSDNPNGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + ++ L + + +++ +GGY+PG D LD++V P + + Sbjct: 364 ISRCMNACTHEAHSTIANNFRQLYSNYLQVKELLPLGGYQPGQDPELDQSVSMYPHLRAY 423 Query: 417 LKQSPSD 423 L+QS ++ Sbjct: 424 LQQSANE 430 >gi|315127316|ref|YP_004069319.1| flagellum-specific ATP synthase [Pseudoalteromonas sp. SM9913] gi|315015830|gb|ADT69168.1| flagellum-specific ATP synthase [Pseudoalteromonas sp. SM9913] Length = 444 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 145/332 (43%), Positives = 213/332 (64%), Gaps = 6/332 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GRV++ LG+P+DG LGK + +++ + R+ + K G+R I+ Sbjct: 103 SLLGRVVDGLGRPLDG---LGKINAEHTLKFAQNAINPLARRPISKPMDVGVRAINSVIT 159 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216 + GQR+G+FAGSG+GKS LL M R D +++ LVGERGREV+EFIE+ LG + K+ Sbjct: 160 VGQGQRMGLFAGSGVGKSVLLGMMTRGSEADVIVVGLVGERGREVKEFIEEILGVEGRKR 219 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 SVVV A +D SP++R +AVTIAEYF +G NVLL+LDS+TR+A + REIA GE Sbjct: 220 SVVVAAPADASPLMRLKGCESAVTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEP 279 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P +GYP SVF++LP L+ER G + +G+ITA +VL +GD+ DPIAD+ R+ILDGHI Sbjct: 280 PATKGYPPSVFAKLPALVERAGNGGEGQGSITAFFTVLSEGDDMQDPIADAARAILDGHI 339 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LA+ G YP +D S+SR+ + S + L + +++ +D+ +G Y+ Sbjct: 340 VLSRDLADSGHYPAIDIEKSISRVMPQVVSESHMQQARVLKQVYSMYQQNKDMITLGAYQ 399 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 G D +LD+A++ +P + FL+Q D+ S D Sbjct: 400 KGSDQMLDQAINMMPRVNAFLQQGMRDVISYD 431 >gi|126665012|ref|ZP_01735995.1| flagellum-specific ATP synthase [Marinobacter sp. ELB17] gi|126630382|gb|EBA00997.1| flagellum-specific ATP synthase [Marinobacter sp. ELB17] Length = 479 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 158/401 (39%), Positives = 234/401 (58%), Gaps = 10/401 (2%) Query: 32 VYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW 90 V T+ C+ + +GD V Q + S + +V+ + VY+ P+ E + G LV Sbjct: 48 VGLTLECVGVPMVVGDRCVIQSQGSSVVEAEVVGFEDEKVYLMPLTAIEGLRPGALVVPL 107 Query: 91 GRF-RISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFK 146 R+ GRV++ G+P+DG L + LS +I++ +NR V + Sbjct: 108 SSTSRVPVGNQLLGRVVDGSGEPLDGKGPLHAEARVSLSGDIINP----LNRAPVRQPMD 163 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206 GIR I+ + GQR+G+FAGSG+GKS LL M R D ++ L+GERGREV+EFI Sbjct: 164 VGIRAINALLTVGQGQRLGLFAGSGVGKSVLLGMMTRFTNADVTVVGLIGERGREVKEFI 223 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 ED LG+ L +SVVV + +D+SP++R A + IAE++ +G VLL++DS+TR+A + Sbjct: 224 EDILGEEGLARSVVVASPADDSPLMRLRAAMLTTRIAEFYRDQGKRVLLLMDSLTRYAQA 283 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 REIA GE P +GYP SVF++LP+L+ER G G+ITA +VL +GD+ DPIA Sbjct: 284 QREIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDDQQDPIA 343 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 D+ R+ILDGHIVL+R LAEEG YP +D AS+SR+ + + + R+++ Sbjct: 344 DAARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTEPEHFARAQRFKQVYSRYQQ 403 Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 RD+ +G Y G D D A+ + + FLKQ S+ +S Sbjct: 404 ARDLISVGAYVKGSDPETDFAIAHIANMRQFLKQGLSEKTS 444 >gi|54307262|ref|YP_128282.1| putative FliI, flagellum-specific ATP synthase [Photobacterium profundum SS9] gi|46911682|emb|CAG18480.1| Putative FliI, flagellum-specific ATP synthase [Photobacterium profundum SS9] Length = 446 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 145/338 (42%), Positives = 210/338 (62%), Gaps = 3/338 (0%) Query: 84 GDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G VF G +I+ GRV+N LG+P+D + D + + + + R + Sbjct: 88 GSRVFPLHGDSKINVGYSMLGRVLNGLGEPLDSRGPI-TADQRINLQGETINPLQRLPIS 146 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 G+RVI+ + GQR+G+FAGSG+GKS LL M R+ + ++ L+GERGREV Sbjct: 147 TQLDVGVRVINSMLSVGKGQRMGLFAGSGVGKSVLLGMMTRNTTAEITVVGLIGERGREV 206 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 REFIE LG + +K +VV+ + +D+ P++R A + IAE+F +G +VLL++DS+TR Sbjct: 207 REFIEHSLGPEGMKNAVVIASPADDPPLMRLRASMLCHRIAEFFRDQGHDVLLLMDSLTR 266 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 +A + REIA GE P +GYP SVFS LP+L+ER G EKG+ITA +VL +GD+ Sbjct: 267 YAQAQREIALAVGEPPATKGYPPSVFSMLPQLVERAGNGATEKGSITAFYTVLSEGDDQQ 326 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 DPIAD+ R+ILDGHIVLNR LAE+G YP +D S+SR + + ++ + + L Sbjct: 327 DPIADAARAILDGHIVLNRELAEQGHYPAIDIEQSISRAMPQVVTPEQLQKAQQVKQLYA 386 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 R+ + +D+ +GGY+ G D LD AVH P I DFL+Q Sbjct: 387 RYRQVQDLISLGGYQQGQDQNLDMAVHYYPEICDFLQQ 424 >gi|312602777|ref|YP_004022622.1| type III secretion cytoplasmic ATPase SctN [Burkholderia rhizoxinica HKI 454] gi|306431580|emb|CBK52132.1| type III secretion cytoplasmic ATPase SctN [Burkholderia rhizoxinica HKI 454] gi|312170091|emb|CBW77103.1| type III secretion cytoplasmic ATPase SctN [Burkholderia rhizoxinica HKI 454] Length = 459 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 166/422 (39%), Positives = 239/422 (56%), Gaps = 13/422 (3%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYIC 73 S + + G + + V L V LG+ + + L +VI D+ + Sbjct: 36 STRAIARNGKVLEVIGTLVKVGGLD--VTLGELCELRAADGSLLQHAEVIGFTRDVALLS 93 Query: 74 PVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME--IMS 130 P E IS V GR + GRVI++LG+PIDG G D + E I + Sbjct: 94 PFSRLESISRSTRVIGLGRPLSVPVGEGLLGRVIDSLGQPIDG---FGPIDANEERPIFA 150 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 P M+R+ +E TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D Sbjct: 151 DSPDPMSRRMIEYPLATGVRVVDSMMTLAEGQRMGIFAPAGVGKSTLLGMFARGAQCDVT 210 Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I+L+GERGREVREF+E LG + + +SVVV ATSD S I R A A IAEYF +G Sbjct: 211 VIALIGERGREVREFVELILGKEGMARSVVVCATSDRSSIERAKAAYVATAIAEYFRDRG 270 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VLL++DS+TRFA + REI +GE P RG+P S+F+ELPRLLER G G+ITA Sbjct: 271 QRVLLMMDSLTRFARAQREIGLAAGEPPARRGFPPSIFAELPRLLERAGMG--ATGSITA 328 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VL + ++ +DPIA+ VR ILDGH++L+R +A +YP +D L S+SR+ + + Sbjct: 329 LYTVLAEDESGSDPIAEEVRGILDGHMILSREIAARNQYPAIDVLGSLSRVMSQVMPREY 388 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 + + L+ + E + IG Y+PG + + D+A+ ++ I DFL Q + + D Sbjct: 389 VDAAARVRELLAKHREVEMLLQIGEYQPGGNPLADEAIAKIDAIRDFLGQRTDEWADPDD 448 Query: 430 FQ 431 Q Sbjct: 449 TQ 450 >gi|332533123|ref|ZP_08408992.1| flagellum-specific ATP synthase FliI [Pseudoalteromonas haloplanktis ANT/505] gi|332037405|gb|EGI73859.1| flagellum-specific ATP synthase FliI [Pseudoalteromonas haloplanktis ANT/505] Length = 444 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 145/332 (43%), Positives = 213/332 (64%), Gaps = 6/332 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GRV++ LG+P+DG LGK + ++ ++R+ + K G+R I+ Sbjct: 103 SLLGRVVDGLGRPLDG---LGKINAEHHLKFAQNTINPLSRRPITKPMDVGVRAINSVIT 159 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216 + GQR+G+FAGSG+GKS LL M R D +++ LVGERGREV+EFIE+ LG + K+ Sbjct: 160 VGQGQRMGLFAGSGVGKSVLLGMMTRGSEADVIVVGLVGERGREVKEFIEEILGVEGRKR 219 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 SVVV A +D SP++R +AVTIAEYF +G NVLL+LDS+TR+A + REIA GE Sbjct: 220 SVVVAAPADSSPLMRLKGCESAVTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEP 279 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P +GYP SVF++LP L+ER G + +G+ITA +VL +GD+ DPIAD+ R+ILDGHI Sbjct: 280 PATKGYPPSVFAKLPALVERAGNGGEGQGSITAFFTVLSEGDDMQDPIADAARAILDGHI 339 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LA+ G YP +D S+SR+ + S + L + +++ +D+ +G Y+ Sbjct: 340 VLSRDLADSGHYPAIDIEKSISRVMPQVVSEPHMQQARVLKQVYSMYQQNKDMITLGAYQ 399 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 G D +LD+A++ +P + FL+Q D+ S D Sbjct: 400 KGTDQMLDQAINMMPRVNAFLQQGMRDVISYD 431 >gi|160880846|ref|YP_001559814.1| flagellar protein export ATPase FliI [Clostridium phytofermentans ISDg] gi|160429512|gb|ABX43075.1| flagellar protein export ATPase FliI [Clostridium phytofermentans ISDg] Length = 434 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 153/340 (45%), Positives = 228/340 (67%), Gaps = 10/340 (2%) Query: 101 WCGRVINALGKPIDGDD-SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 G+ ++ LG P+D SL + S + +K P M+R+ + + G+R +D + Sbjct: 98 LLGQTLDGLGNPMDMSTLSLSE---SYPVDAKAPDPMDRELIGEVLSLGVRAVDGLLTIG 154 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQRIG+FAGSG+GKSTLL MFAR+ D +I+L+GERGREV+EFIE LG + +K+SV Sbjct: 155 KGQRIGIFAGSGVGKSTLLGMFARNTKADINVIALIGERGREVKEFIERDLGPEGVKRSV 214 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V+ATSD+ ++RK A TA IAEYF KG +VLL++DS+TRF+ + REI SGE PV Sbjct: 215 LVIATSDKPALIRKKAAKTATAIAEYFRDKGKDVLLMMDSLTRFSMAQREIGLASGEPPV 274 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +RGYP SV+SE+P+LLER G S +KG+IT + +VLVDGD+ N+PI D+ R ILDGHIVL Sbjct: 275 SRGYPPSVYSEMPKLLERAGNS--DKGSITGLYTVLVDGDDFNEPITDTARGILDGHIVL 332 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R +A++ YP +D LAS+SR+ +++ KKL L ++ +++ D+ IG Y+PG Sbjct: 333 SRKMAQKNHYPAIDVLASISRVMSAIATSEHKKLAGKLKMVLATYQDAEDLINIGAYKPG 392 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + +D ++ ++ + +FL Q D + F++ KL+ Sbjct: 393 TNKNIDYSMRKIEQVNEFLCQQVDDKAD---FEDTIHKLE 429 >gi|23099013|ref|NP_692479.1| flagellum-specific ATP synthase [Oceanobacillus iheyensis HTE831] gi|22777241|dbj|BAC13514.1| flagellar-specific H(+)-transporting ATP synthase [Oceanobacillus iheyensis HTE831] Length = 439 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 158/388 (40%), Positives = 236/388 (60%), Gaps = 8/388 (2%) Query: 55 NSDN--LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK 111 N+D+ L +V+ + + + P E+ G LV G+ + G+V+N+LGK Sbjct: 49 NTDHALLAEVVGFRNEKIILMPYTEVTEVGPGCLVEATGKPLTVKVGRGLVGKVLNSLGK 108 Query: 112 PIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170 P++ + L KG L+ + + PP + R + + G++ ID + GQR+G+FAGS Sbjct: 109 PLNDTEELPKG-LANFMTEQTPPNPLERPPIRTPLQVGVKAIDSLLTMGEGQRVGLFAGS 167 Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPI 229 G+GKSTLL M AR+ + +I+L+GERGREVREFIE+ LG + LKKS+VVVATSD+ + Sbjct: 168 GVGKSTLLGMIARNSSAEINVIALIGERGREVREFIENDLGPEGLKKSIVVVATSDQPAL 227 Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 +R TA I+EYF G V L++DS+TR A + REI GE P +GY SVFS Sbjct: 228 MRIKGAYTATAISEYFRDLGYKVNLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFSI 287 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 LP+LLER G + G IT +VLVDGD+ N+PIAD+VR ILDGH +L+R LAE G++P Sbjct: 288 LPKLLERTGTN--ANGTITGFYTVLVDGDDMNEPIADAVRGILDGHFILDRKLAERGQFP 345 Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409 ++ L S+SR+ + + K+ +L L+ +EE +++ IG Y+ G + +D+A+ Sbjct: 346 AINVLKSISRVMNVIADEEHKEQSQTLRKLLSTYEENQELITIGAYKKGTNHEIDQAISF 405 Query: 410 VPIIYDFLKQSPSDLSSEDVFQEITKKL 437 P I +FLKQ + + D ++ K L Sbjct: 406 QPYILEFLKQGIHEKRTFDETIQMMKNL 433 >gi|77359744|ref|YP_339319.1| flagellum-specific ATP synthase [Pseudoalteromonas haloplanktis TAC125] gi|76874655|emb|CAI85876.1| flagellum-specific ATP synthase [Pseudoalteromonas haloplanktis TAC125] Length = 444 Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 145/332 (43%), Positives = 214/332 (64%), Gaps = 6/332 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GRV++ LG+P+DG LGK + ++ K ++R+ + + G+R I+ Sbjct: 103 SLLGRVVDGLGRPLDG---LGKINAEHYLKFAQKPINPLSRRPISQPMDVGVRAINSVIT 159 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216 + GQR+G+FAGSG+GKS LL M R D +++ LVGERGREV+EFIE+ LG + K+ Sbjct: 160 VGQGQRMGLFAGSGVGKSVLLGMMTRGSEADVIVVGLVGERGREVKEFIEEILGVEGRKR 219 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 SVVV A +D SP++R +AVTIAEYF +G NVLL+LDS+TR+A + REIA GE Sbjct: 220 SVVVAAPADSSPLMRLKGCESAVTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEP 279 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P +GYP SVF++LP L+ER G + +G+ITA +VL +GD+ DPIAD+ R+ILDGHI Sbjct: 280 PATKGYPPSVFAKLPALVERAGNGGEGQGSITAFFTVLSEGDDMQDPIADAARAILDGHI 339 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LA+ G YP +D S+SR+ + S + L + +++ +D+ +G Y+ Sbjct: 340 VLSRELADSGHYPAIDIEKSISRVMPQVVSETHMQQARVLKQVYSMYQQNKDMITLGAYQ 399 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 G D +LD+A++ +P + FL+Q D+ S D Sbjct: 400 KGTDQMLDQAINMMPRVNAFLQQGMRDVISYD 431 >gi|206895959|ref|YP_002246686.1| flagellum-specific ATP synthase [Coprothermobacter proteolyticus DSM 5265] gi|206738576|gb|ACI17654.1| flagellum-specific ATP synthase [Coprothermobacter proteolyticus DSM 5265] Length = 438 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 171/414 (41%), Positives = 243/414 (58%), Gaps = 21/414 (5%) Query: 11 LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70 L E Y K L V G I ++T + S V++ +V+ Sbjct: 18 LFEVYGKVLNVSGLSIEALTPASFVGELCS---------VNRFDGKPMFAEVVGFKEGKT 68 Query: 71 YICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME-- 127 + P+G + I L+ GR I S GRV+NA+G+P+D KG + E Sbjct: 69 LLMPIGDVQGIGPNSLIRAMGRPLWIKVSDGLVGRVVNAIGEPLDD-----KGPVYGEKR 123 Query: 128 -IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + P + R+ + + +T I+ ID + GQR+G+FAGSG+GKSTLL M AR+ Sbjct: 124 SVYQDPPHPLKRKIITEPLQTSIKAIDGLLTVGKGQRVGIFAGSGVGKSTLLGMIARNSS 183 Query: 187 FDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +I LVGERGREVR+FIE D + K+SVVVVATSD+ +LR A LT +TIAEYF Sbjct: 184 ADVNVIILVGERGREVRKFIEEDLTEEGAKRSVVVVATSDQPALLRVKAVLTGMTIAEYF 243 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL+++DS+TR A + RE+ + GE P RGY SVF+ LP++LER G S+K G Sbjct: 244 RDQGKDVLVMMDSVTRLAMAQREVGLSIGEPPTTRGYTPSVFALLPKILERAGNSDK--G 301 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA I+VLV+GD+ N+P+AD+VRSILDGHIVL+R+LA YP +D L S+SR+ + Sbjct: 302 SITAFITVLVEGDDMNEPVADAVRSILDGHIVLSRALAHRAHYPAIDVLQSISRVMNDVV 361 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 SA KL + + L+ + E D+ IG Y+ G + +D+A+ + I FL Q Sbjct: 362 SAKHLKLANRMRELLAVYTEAEDLINIGAYQRGNNPKIDEALDYIDAINHFLLQ 415 >gi|330808218|ref|YP_004352680.1| flagellum-specific ATP synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376326|gb|AEA67676.1| flagellum-specific ATP synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 452 Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 152/356 (42%), Positives = 215/356 (60%), Gaps = 3/356 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+ +DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADNGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISVPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF++LP+L+ER G +EK G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEKGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ SA Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPSVISA 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 + K R++++RD+ +G Y PG D D A+ P + +L+QS +D Sbjct: 376 EHMKRAQQFKQYWSRYQQSRDLISVGAYVPGGDRETDTAISLYPAMAVYLRQSLND 431 >gi|327543131|gb|EGF29567.1| flagellum-specific ATP synthase [Rhodopirellula baltica WH47] Length = 467 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 165/420 (39%), Positives = 248/420 (59%), Gaps = 12/420 (2%) Query: 24 GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G ++S+T TV ++ + + + + K + L +VI + + P+ ++ Sbjct: 34 GRVASVTGDAVTVQGMTAPLGAICELMPPDAKPT--LARVIGFDDTRPILAPMEAISALA 91 Query: 83 LGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 GD V R R+ S CGRVI+A G+PIDG L + + P +++R Sbjct: 92 AGDRVRLVSRSLTLRVGDS--LCGRVIDAFGRPIDGK-PLSDDLVRVSASRAAPDSLDRP 148 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 +++ +TG+R ID GQR+G+FAGSG+GKSTLL M R D+++I++VGERG Sbjct: 149 PIDEPLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTLLGMLTRGTTADRIVIAMVGERG 208 Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REV+EF++ LG LK+SVVVVATSD+ R A TA IAE F +G VLL++DS Sbjct: 209 REVQEFMQRALGAAGLKRSVVVVATSDKPAAQRLSAAWTATAIAEQFRDEGHRVLLLVDS 268 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + RE+ +GE P RGYP SVF+ LP+L+ER G KG+ITA +VLV+GD Sbjct: 269 VTRFAMAQRELGLAAGEPPTTRGYPPSVFNMLPQLVERAG--RTTKGSITAFYTVLVEGD 326 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 ++N+PI+D+VR +LDGHIVLNR LA G YPP+D S+SR+A+ + + + + Sbjct: 327 DNNEPISDTVRGLLDGHIVLNRKLAHRGHYPPIDIPESISRVANHLVTPETYQATLGIRE 386 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + +++ + D+ IG YR G D +D A+ I D L+Q ++++ Q +KL Sbjct: 387 HMVQYQTSEDLISIGAYRSGSDPRVDTAIAMRDPINDLLRQDANEITPIADSQARVQKLH 446 >gi|83716747|ref|YP_438376.1| flagellum-specific ATP synthase [Burkholderia thailandensis E264] gi|167614822|ref|ZP_02383457.1| flagellum-specific ATP synthase [Burkholderia thailandensis Bt4] gi|257141407|ref|ZP_05589669.1| flagellum-specific ATP synthase [Burkholderia thailandensis E264] gi|83650572|gb|ABC34636.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis E264] Length = 435 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 160/397 (40%), Positives = 228/397 (57%), Gaps = 9/397 (2%) Query: 46 GDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACW 101 G+ V + + D + QV+ N + ++ P + G V G RI S W Sbjct: 41 GERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAGAQVLSCDRQGSLRIGRS--W 98 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+ IDG LG GD+++ + ++ V G+R ID L G Sbjct: 99 LGRIVNGLGEAIDGRGPLG-GDVALRAHPAPVNPLRKRPVRDTLDVGVRAIDGLLTLGRG 157 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+ AGSG+GKS LL M R+ D V++ L+GERGREVREF++ LG+ L KSV+V Sbjct: 158 QRVGLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLV 217 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +DESP++R A IA +F G NVLL++DS+TR+A + REIA + GE P R Sbjct: 218 AAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATR 277 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF LP+L+E G E G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R Sbjct: 278 GYPPSVFGMLPQLVETAGNGEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTR 336 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D SVSR + A+ + L + +I R E+ RD+ +GGY G D Sbjct: 337 ELAERGHYPAIDVPRSVSRCMSQVAGAEHEALARKVKEMIGRHEQVRDLIPLGGYVQGAD 396 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D+AV + I FL+Q D++ D ++L Sbjct: 397 PATDEAVAKAARIDAFLRQDMRDVARRDATLAALREL 433 >gi|149189869|ref|ZP_01868149.1| putative flagellum-specific ATP synthase [Vibrio shilonii AK1] gi|148836355|gb|EDL53312.1| putative flagellum-specific ATP synthase [Vibrio shilonii AK1] Length = 448 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 151/367 (41%), Positives = 227/367 (61%), Gaps = 5/367 (1%) Query: 60 GQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + +I Y+ PV +G + ++ G ++ + W GRV+N LG+ +D Sbjct: 65 AQVVGFDHNIAYLMPVRQLGGLFAGAKVIPLDGDSSVNLGSHWLGRVVNGLGEALDDGAV 124 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 125 LKGGDRVSLEPKPINP--LKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 182 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREFIE L + KK++++ A +DESP++R A L Sbjct: 183 MGMITQNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATL 242 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AEYF KG++VLL++DS+TR+A + REIA GE P +RGYP SVFS LP+LLER Sbjct: 243 LCHRVAEYFRDKGNDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLER 302 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE G++TA+ +VL +GD+ DP+ DS R+ILDGH+VL+RSLAE+G YP +D AS Sbjct: 303 AGNSEHPDGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRSLAEQGHYPAIDINAS 362 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR L + L + + +++ +GGY+PG D LD++V P + + Sbjct: 363 ISRCMSGCTPEAHSTLANQFRQLYSNYLQVKELLPLGGYQPGQDPELDQSVAMHPQLKKY 422 Query: 417 LKQSPSD 423 L Q+ +D Sbjct: 423 LLQAAND 429 >gi|167576647|ref|ZP_02369521.1| flagellum-specific ATP synthase [Burkholderia thailandensis TXDOH] Length = 435 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 160/397 (40%), Positives = 228/397 (57%), Gaps = 9/397 (2%) Query: 46 GDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACW 101 G+ V + + D + QV+ N + ++ P + G V G RI S W Sbjct: 41 GERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAGAQVLSCDRQGSLRIGRS--W 98 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+ IDG LG GD+++ + ++ V G+R ID L G Sbjct: 99 LGRIVNGLGEAIDGRGPLG-GDVALRAHPAPVNPLRKRPVRDTLDVGVRAIDGLLTLGRG 157 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+ AGSG+GKS LL M R+ D V++ L+GERGREVREF++ LG+ L KSV+V Sbjct: 158 QRVGLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLV 217 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +DESP++R A IA +F G NVLL++DS+TR+A + REIA + GE P R Sbjct: 218 AAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATR 277 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF LP+L+E G E G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R Sbjct: 278 GYPPSVFGMLPQLVEMAGNGEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTR 336 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D SVSR + A+ + L + +I R E+ RD+ +GGY G D Sbjct: 337 ELAERGHYPAIDVPRSVSRCMSQVAGAEHEALARKVKEMIGRHEQVRDLIPLGGYVQGAD 396 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D+AV + I FL+Q D++ D ++L Sbjct: 397 PATDEAVAKAARIDAFLRQDMRDVARRDATLAALREL 433 >gi|312135851|ref|YP_004003189.1| atpase, flii/yscn family [Caldicellulosiruptor owensensis OL] gi|311775902|gb|ADQ05389.1| ATPase, FliI/YscN family [Caldicellulosiruptor owensensis OL] Length = 434 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 158/403 (39%), Positives = 241/403 (59%), Gaps = 17/403 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP----VGI-- 77 G+++ + + T+ V +G + ++ L +V+ + V + P VG+ Sbjct: 22 GFVNQVIGL--TIESQGPAVSIGTLCRIKAAKTETLAEVVGFKENKVLLMPYSDLVGVFP 79 Query: 78 GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 G ++ D +F I GR+++ LG+PIDG + K + + ++ P + Sbjct: 80 GCKVIAQDSIFE-----IKVGNELLGRILDGLGQPIDGKGEI-KSKIKYPVENRAPNPLE 133 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R R++ GI+ ID + GQR+G+FAGSG+GKSTLL M AR+ D +++L+GE Sbjct: 134 RPRIDTIMPLGIKAIDALLTIGRGQRVGIFAGSGVGKSTLLGMIARNAKADVNVLALIGE 193 Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGRE++EF+E L D LK+SVVVVATSDES + R A A+ IAEYF +G +VL ++ Sbjct: 194 RGRELKEFLEKDLKDEGLKRSVVVVATSDESALKRVKAAYVAMAIAEYFRDQGLDVLFLM 253 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TRFA + REI GE PV+RGY SVFS +P+LLER G + G+ITA+ +VLVD Sbjct: 254 DSLTRFAMAQREIGLAVGEPPVSRGYTPSVFSIMPKLLERAG--KNRNGSITALFTVLVD 311 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 GD+ N+PI D+ R ILDGHIVL+R++A + YP +D LAS+SR+ + ++L + Sbjct: 312 GDDFNEPITDTARGILDGHIVLSRAIANKNHYPAIDVLASISRVMNDIVEPFHRELANQT 371 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 ++ + E D+ IG Y G + +D+A+ +P I FL+Q Sbjct: 372 KRILAVYREAEDLINIGAYTKGSNPEIDRAIDLMPRINQFLRQ 414 >gi|82702477|ref|YP_412043.1| ATPase FliI/YscN [Nitrosospira multiformis ATCC 25196] gi|82410542|gb|ABB74651.1| ATPase FliI/YscN [Nitrosospira multiformis ATCC 25196] Length = 470 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 162/440 (36%), Positives = 245/440 (55%), Gaps = 29/440 (6%) Query: 3 KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62 KN LA+++ + + G ++ +T + T L V G ++ NS +V Sbjct: 15 KNCSGLAEVSPPFQIS-----GSLTRVTGLIMEATGLKLAVGSGCTILMPNGNSME-AEV 68 Query: 63 IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA---------------------CW 101 + + D +Y+ P ++ G V W R + P+ Sbjct: 69 VGFHGDRLYLMPAHGMFGLAPGAKVVPWDRTGVLPNPGSASRQRRRASDQISRFPVGEAL 128 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+P+D L + S + P ++R+ + + G+R I+ + G Sbjct: 129 LGRVVDGTGRPLDNLGPLEVERSASAAGSPINP-LDREPISEVLDVGVRAINALLTVGRG 187 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE LG + L +SVVV Sbjct: 188 QRMGLFAGSGVGKSVLLGMMARYTSADIIVVGLIGERGREVKDFIEQILGAEGLARSVVV 247 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P++R A ++AEYF +G NVLLI+DS+TR+A + REIA GE P + Sbjct: 248 AAPADTWPLMRLQGASYATSVAEYFRDQGKNVLLIMDSLTRYAMAQREIALAIGEPPATK 307 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP+L+ER G K G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 308 GYPPSVFAKLPQLVERAGNGVKGSGSITAFYTVLAEGDDQQDPIADAARAILDGHIVLSR 367 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D AS+SR S + + V + L R++ +RD+ +G Y PG D Sbjct: 368 QLAESGHYPAIDIEASISRAMTSLISPEYFEQVRNFKQLFSRYQRSRDLISVGAYSPGND 427 Query: 401 LILDKAVHQVPIIYDFLKQS 420 +LD+A+ P + FL+Q+ Sbjct: 428 RLLDRAIALYPKLEHFLQQT 447 >gi|42524760|ref|NP_970140.1| flagellum-specific ATP synthase [Bdellovibrio bacteriovorus HD100] gi|39576970|emb|CAE78199.1| flagellum-specific ATP synthase [Bdellovibrio bacteriovorus HD100] Length = 442 Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 151/343 (44%), Positives = 220/343 (64%), Gaps = 14/343 (4%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GRV++ LG+P+D KG++ + + S+V ++R+ + + GIR I+ Sbjct: 103 LLGRVVDGLGRPLDD-----KGEVENFREVPLYSEVRNPLDRRPIREPIDLGIRAINGAL 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215 GQR+ + AGSG+GKS LL M AR+ D +I+++GERGREVREFIE LG + +K Sbjct: 158 TAGLGQRVAIMAGSGVGKSVLLGMMARNTNADVNVIAMIGERGREVREFIEHDLGPEGMK 217 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 +SVVV TSD+SP+LR A +AEYFSS+G NVLL++DS+TRFA + REI ++GE Sbjct: 218 RSVVVCVTSDQSPLLRMRGAYVATALAEYFSSQGKNVLLMMDSVTRFAMAQREIGLSTGE 277 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +GY SVF+ LP+LLER G E E G+IT + LV+GD+ NDPI DSVRSI+DGH Sbjct: 278 PPSQKGYTPSVFATLPKLLERAGSFEGE-GSITGFYTTLVEGDDMNDPIGDSVRSIVDGH 336 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL+RSLA++G +P +D + S SR+ S + KL L + +++ D+ IG Y Sbjct: 337 IVLSRSLAQKGHFPAIDIMQSASRVMRAVSSPEHSKLAQKLRETLAVYKDAEDLINIGAY 396 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +PG + +D+AV + + DFLKQ D ++ F + +++Q Sbjct: 397 KPGSNPKIDRAVKVIDQVNDFLKQRVEDPTN---FTQTVRQMQ 436 >gi|32477553|ref|NP_870547.1| flagellum-specific ATP synthase [Rhodopirellula baltica SH 1] gi|32448107|emb|CAD77624.1| flagellum-specific ATP synthase [Rhodopirellula baltica SH 1] Length = 467 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 165/420 (39%), Positives = 248/420 (59%), Gaps = 12/420 (2%) Query: 24 GYISSITSVYYTVTCLSQYV-CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G ++S+T TV ++ + + + + K + L +VI + + P+ ++ Sbjct: 34 GRVASVTGDAVTVQGMTAPLGAICELMPPDAKPT--LARVIGFDDTRPILAPMEAISALA 91 Query: 83 LGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 GD V R R+ S CGRVI+A G+PIDG L + + P +++R Sbjct: 92 AGDRVRLVSRSLTLRVGDS--LCGRVIDAFGRPIDGK-PLSDDLVRVSASRAAPDSLDRP 148 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 +++ +TG+R ID GQR+G+FAGSG+GKSTLL M R D+++I++VGERG Sbjct: 149 PIDEPLQTGVRAIDAMLTCGVGQRLGIFAGSGVGKSTLLGMLTRGTTADRIVIAMVGERG 208 Query: 200 REVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REV+EF++ LG LK+SVVVVATSD+ R A TA IAE F +G VLL++DS Sbjct: 209 REVQEFMQRALGAAGLKRSVVVVATSDKPAAQRLSAAWTATAIAEKFRDEGHRVLLLVDS 268 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + RE+ +GE P RGYP SVF+ LP+L+ER G KG+ITA +VLV+GD Sbjct: 269 VTRFAMAQRELGLAAGEPPTTRGYPPSVFNMLPQLVERAG--RTTKGSITAFYTVLVEGD 326 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 ++N+PI+D+VR +LDGHIVLNR LA G YPP+D S+SR+A+ + + + + Sbjct: 327 DNNEPISDTVRGLLDGHIVLNRKLAHRGHYPPIDIPESISRVANHLVTPETYQATLGIRE 386 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + +++ + D+ IG YR G D +D A+ I D L+Q ++++ Q +KL Sbjct: 387 HMVQYQTSEDLISIGAYRSGSDPRVDTAIAMRDPINDLLRQDANEITPIADSQARVQKLH 446 >gi|108810006|ref|YP_653922.1| type III secretion system ATPase [Yersinia pestis Antiqua] gi|108813561|ref|YP_649328.1| type III secretion system ATPase [Yersinia pestis Nepal516] gi|145600951|ref|YP_001165027.1| type III secretion system ATPase [Yersinia pestis Pestoides F] gi|108777209|gb|ABG19728.1| type III secretion system ATP synthase [Yersinia pestis Nepal516] gi|108781919|gb|ABG15977.1| putative type III secretion system ATP synthase [Yersinia pestis Antiqua] gi|145212647|gb|ABP42054.1| type III secretion system ATP synthase [Yersinia pestis Pestoides F] Length = 448 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 158/363 (43%), Positives = 219/363 (60%), Gaps = 6/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117 L +V+ I ++ + P + + G V G R+ A GR+++ LG PIDG Sbjct: 65 LAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP 124 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L G E+ P + RQ VE+ TGIR ID GQRIG+FA +G+GKSTL Sbjct: 125 PL-TGQWR-ELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTL 182 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 LSM D ++++L+GERGREVREF+E L + ++VVVVATSD + R Sbjct: 183 LSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLS 242 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA T+AEYF +G VLL+ DS+TR+A + REI +GE P A +P SVF+ LPRLLER Sbjct: 243 TATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLER 302 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S++ G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA G YP +D AS Sbjct: 303 TGNSDR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS 360 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + SA + + L ++ ++E + IG Y+ G DL D+A+ + P I F Sbjct: 361 VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF 420 Query: 417 LKQ 419 L+Q Sbjct: 421 LQQ 423 >gi|332159957|ref|YP_004296534.1| Secretion system apparatus ATP synthase ssaN [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664187|gb|ADZ40831.1| Secretion system apparatus ATP synthase ssaN [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 451 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 162/374 (43%), Positives = 225/374 (60%), Gaps = 7/374 (1%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113 + D L +V+ I + P + G + G R+ GRV++ LG+PI Sbjct: 58 SPDMLAEVVAIEQQTALLSPFASSAGLRCGQWISPLGHEHRVRVGVDLLGRVLDGLGEPI 117 Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 D L +G E+ P + RQ V++ TGIR ID GQRIG+FA +G+G Sbjct: 118 DAGPPL-RGHWR-ELDCPPPDPLTRQPVQQILTTGIRAIDGVLSCGEGQRIGIFAAAGVG 175 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232 KS+LLSM R D ++++L+GERGREVREF+E L + ++VVVVATSD + R Sbjct: 176 KSSLLSMLCRGCRADIIVLALIGERGREVREFLEQVLTPETRARTVVVVATSDRPALERL 235 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 TA T+AEYF +G+ VLL+ DS+TR+A + REI +GE P +PTSVF+ LPR Sbjct: 236 KGIYTATTVAEYFRERGEKVLLMADSLTRYARAAREIGLAAGEHPAMGSFPTSVFAALPR 295 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G SE+ G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA G YP +D Sbjct: 296 LLERAGNSER--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAID 353 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 ASVSR+ + SA+ + L L H+ ++E + +G Y+ G DL D+A+ + P Sbjct: 354 IAASVSRIMPQIVSAEHRALAQKLRHIQACYQEIELLVRVGEYQEGQDLQADEALQRYPG 413 Query: 413 IYDFLKQSPSDLSS 426 I FL+Q S LSS Sbjct: 414 ICAFLQQE-SALSS 426 >gi|253573521|ref|ZP_04850864.1| flagellar protein export ATPase FliI [Paenibacillus sp. oral taxon 786 str. D14] gi|251847049|gb|EES75054.1| flagellar protein export ATPase FliI [Paenibacillus sp. oral taxon 786 str. D14] Length = 439 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 153/355 (43%), Positives = 226/355 (63%), Gaps = 11/355 (3%) Query: 70 VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGD---DSLGKGDLS 125 V + P+G + I G D+V + + G+V++ LG+P+DG +G Sbjct: 69 VLLMPLGELQSIGPGCDVVGTGKPLTVQVGSELLGKVLDGLGQPLDGSLLPSRMGHYSTY 128 Query: 126 MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185 + M+ +NR RV + G+R ID + GQR+G+FAGSG+GKSTL+ M AR+ Sbjct: 129 NKPMNP----LNRPRVSEPIGIGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMIARNT 184 Query: 186 CFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244 D +I+LVGERGREV +FIE LG + L++SVVVVATSD+ ++R L A TIAEY Sbjct: 185 SADVNVIALVGERGREVLDFIERDLGPEGLERSVVVVATSDQPALIRMKGALIATTIAEY 244 Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 F +G NV+L++DS+TR+A ++RE+ GE P RGY SVF+ LP+L+ER G Sbjct: 245 FRDRGLNVMLMMDSVTRYAMALREVGLAVGEPPAMRGYTPSVFAALPKLMERAGTGPT-- 302 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVLNR +A +G +P +D LAS+SR+ Sbjct: 303 GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRGIANKGHFPAIDILASISRVMKDI 362 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 S ++ + +L L+ ++++ D+ IG Y+PG + +D+A+ + I++F KQ Sbjct: 363 VSDEQNEAAENLKRLMAVYKDSEDLINIGAYQPGSNPDIDEAIGAIQQIWNFTKQ 417 >gi|34558482|ref|NP_908297.1| flagellum-specific ATP synthase [Wolinella succinogenes DSM 1740] gi|34484201|emb|CAE11197.1| FLAGELLUM-SPECIFIC ATP SYNTHASE [Wolinella succinogenes] Length = 434 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 165/410 (40%), Positives = 242/410 (59%), Gaps = 13/410 (3%) Query: 17 KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNS-DNLGQVIRINLDIVYICP 74 K+L G + ++S V L V GD V + QG+N +++G V + + + P Sbjct: 13 KSLSPTFGTVVKVSSGAIVVVGLRPSV--GDIVRIIQGENHHESMGMVTVVESESFTVSP 70 Query: 75 VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 E +GD V+ R +I A GRV++ LG+PIDG + L E + Sbjct: 71 FSFIEGSKVGDRVYLNNRGLQIPVGAGLLGRVVDPLGRPIDGAGEI----LGTEYAPIIK 126 Query: 134 P---AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 P AM R +++ F G++ ID GQ++G+FAGSG+GKSTL+ M + Sbjct: 127 PPIAAMKRGMIDEVFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKGASAPIK 186 Query: 191 IISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 +I+L+GERGREV EFIE LG NL+ +V+VVATSD+SP++RK +A+++AEYF ++G+ Sbjct: 187 VIALIGERGREVPEFIEKNLGGNLENTVLVVATSDDSPLMRKYGAFSAMSVAEYFKARGE 246 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VL ++DS+TRFA + REI GE P ++GYP SV + LP+L+ER G E+ G+ITA Sbjct: 247 DVLFMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG-KEEGHGSITAF 305 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ DPIAD RSILDGHIVL+R L + G YPP++ L S SRL + + D Sbjct: 306 FTVLVEGDDMGDPIADQSRSILDGHIVLSRELTDFGIYPPINILNSASRLMNDVSTKDHV 365 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 L +E + IG Y+ G D LD+A+ + + +LKQ+ Sbjct: 366 LAARKFRRLYSLLKENEVLIRIGAYQKGNDRELDEAIEKKERMEGYLKQN 415 >gi|269965406|ref|ZP_06179526.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B] gi|269830052|gb|EEZ84281.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B] Length = 448 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 144/366 (39%), Positives = 228/366 (62%), Gaps = 3/366 (0%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ I Y+ P+ +G + ++ G + S+ W GRV+N LG+P+D D + Sbjct: 66 AQVVGFEHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSSQWLGRVLNGLGEPLD-DGA 124 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 KG + + K + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L+ Sbjct: 125 PLKGGERVSLEPKPINPLKRRPVDTPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLM 184 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 M ++ D +++ L+GERGREVREFIE L + KK++++ A +DESP++R A L Sbjct: 185 GMITKNTEADVIVVGLIGERGREVREFIERNLTPEARKKAIIIAAPADESPLMRLRATLL 244 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 ++EYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 245 CHRVSEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERA 304 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G SE + G++TA+ +VL +GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS+ Sbjct: 305 GNSENQYGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDINASI 364 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR + + ++ + + + +++ +GGY+PG D LD++V P + +L Sbjct: 365 SRCMNTCTQDAHSTIANNFRQMYSNYLQVKELLPLGGYQPGQDPELDQSVAMYPNLRAYL 424 Query: 418 KQSPSD 423 +Q+ ++ Sbjct: 425 QQAANE 430 >gi|318607492|emb|CBY28990.1| type III secretion cytoplasmic ATP synthase [Yersinia enterocolitica subsp. palearctica Y11] Length = 451 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 162/374 (43%), Positives = 225/374 (60%), Gaps = 7/374 (1%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113 + D L +V+ I + P + G + G R+ GRV++ LG+PI Sbjct: 58 SPDMLAEVVAIEQQTALLSPFASSAGLRCGQWISPLGHEHRVRVGVDLLGRVLDGLGEPI 117 Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 D L +G E+ P + RQ V++ TGIR ID GQRIG+FA +G+G Sbjct: 118 DAGPPL-RGHWR-ELDCPPPDPLTRQPVQQILTTGIRAIDGVLSCGEGQRIGIFAAAGVG 175 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232 KS+LLSM R D ++++L+GERGREVREF+E L + ++VVVVATSD + R Sbjct: 176 KSSLLSMLCRGCRADIIVLALIGERGREVREFLEQVLTPETRARTVVVVATSDRPALERL 235 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 TA T+AEYF +G+ VLL+ DS+TR+A + REI +GE P +PTSVF+ LPR Sbjct: 236 KGIYTATTVAEYFRERGEKVLLMADSLTRYARAAREIGLAAGEHPAMGSFPTSVFAALPR 295 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G SE+ G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA G YP +D Sbjct: 296 LLERAGNSER--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAID 353 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 ASVSR+ + SA+ + L L H+ ++E + +G Y+ G DL D+A+ + P Sbjct: 354 IAASVSRIMPQIVSAEHRALAQKLRHIQACYQEIELLVRVGEYQEGQDLQADEALQRYPG 413 Query: 413 IYDFLKQSPSDLSS 426 I FL+Q S LSS Sbjct: 414 ICAFLQQE-SALSS 426 >gi|163733137|ref|ZP_02140581.1| flagellum-specific ATP synthase [Roseobacter litoralis Och 149] gi|161393672|gb|EDQ17997.1| flagellum-specific ATP synthase [Roseobacter litoralis Och 149] Length = 449 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 154/386 (39%), Positives = 229/386 (59%), Gaps = 2/386 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G + + + + L+ +GD VV + G++++++ D + I P E ++L Sbjct: 24 GRVCRVEAGVIHIAGLAGKARIGDLVVVYRQGDPLSGEILQLDGDTLVILPDQDAEGVAL 83 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 D I+PS W GR+I+ G PIDG L +G + + S P R+ + Sbjct: 84 NDRAALLEARGIAPSEGWIGRIIDPFGNPIDGKPLL-RGAHARSLRSAPPEPALRRSMGA 142 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 TG+ V++ P+ GQR+G+FAGSG+GKS+LL A++ D V+++LVGERGRE+R Sbjct: 143 RLNTGMSVLNTMLPVVKGQRVGLFAGSGVGKSSLLGHLAQNMTADVVVVALVGERGRELR 202 Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 F+E+ LG + LK+SVVV ATSD+SP++R+ A+++AE+F G +VL++ DSITRF Sbjct: 203 HFVEEVLGSEGLKRSVVVCATSDQSPLIRRRCAWAAMSVAEHFRDMGLSVLILADSITRF 262 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A + RE+A SGE PV RGYP S + L ER GP E +G+IT + SVLV G + + Sbjct: 263 AEAHREVAVASGEAPVLRGYPPSTAHLIMSLCERAGPGEGSQGDITGIFSVLVAGSDMEE 322 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 PIAD +R +LDGHIVLNR +AE GRYP +D L S+SR A E +L+S + + Sbjct: 323 PIADILRGVLDGHIVLNREIAERGRYPAIDVLKSISRSLPAAADDIENELISIVRRYLSV 382 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVH 408 +E+ + G Y G D +D A+ Sbjct: 383 YEQNEMMIRAGLYSQGSDPEIDAAIQ 408 >gi|22124440|ref|NP_667863.1| type III secretion system ATPase [Yersinia pestis KIM 10] gi|51594678|ref|YP_068869.1| type III secretion system ATPase [Yersinia pseudotuberculosis IP 32953] gi|150260685|ref|ZP_01917413.1| putative type III secretion system ATP synthase [Yersinia pestis CA88-4125] gi|162421510|ref|YP_001608232.1| type III secretion system ATPase [Yersinia pestis Angola] gi|165926753|ref|ZP_02222585.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Orientalis str. F1991016] gi|165936441|ref|ZP_02225009.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Orientalis str. IP275] gi|166010584|ref|ZP_02231482.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213954|ref|ZP_02239989.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Antiqua str. B42003004] gi|167402195|ref|ZP_02307668.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418696|ref|ZP_02310449.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426202|ref|ZP_02317955.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470729|ref|ZP_02335433.1| type III secretion system ATPase [Yersinia pestis FV-1] gi|186893681|ref|YP_001870793.1| type III secretion system ATPase [Yersinia pseudotuberculosis PB1/+] gi|218927473|ref|YP_002345348.1| type III secretion system ATPase [Yersinia pestis CO92] gi|229836521|ref|ZP_04456687.1| putative type III secretion system ATP synthase [Yersinia pestis Pestoides A] gi|229840129|ref|ZP_04460288.1| putative type III secretion system ATP synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842210|ref|ZP_04462365.1| putative type III secretion system ATP synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229904051|ref|ZP_04519164.1| putative type III secretion system ATP synthase [Yersinia pestis Nepal516] gi|270488963|ref|ZP_06206037.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis KIM D27] gi|294502339|ref|YP_003566401.1| flagellum-specific ATP synthase [Yersinia pestis Z176003] gi|21957227|gb|AAM84114.1|AE013654_3 flagellum-specific ATP synthase [Yersinia pestis KIM 10] gi|51587960|emb|CAH19563.1| putative type III secretion system ATPase, EscN/SsaN/YscN [Yersinia pseudotuberculosis IP 32953] gi|115346084|emb|CAL18952.1| putative type III secretion system ATP synthase [Yersinia pestis CO92] gi|149290093|gb|EDM40170.1| putative type III secretion system ATP synthase [Yersinia pestis CA88-4125] gi|162354325|gb|ABX88273.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis Angola] gi|165915557|gb|EDR34166.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Orientalis str. IP275] gi|165921376|gb|EDR38600.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Orientalis str. F1991016] gi|165990674|gb|EDR42975.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Antiqua str. E1979001] gi|166204929|gb|EDR49409.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962690|gb|EDR58711.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048376|gb|EDR59784.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054913|gb|EDR64715.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186696707|gb|ACC87336.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pseudotuberculosis PB1/+] gi|229679821|gb|EEO75924.1| putative type III secretion system ATP synthase [Yersinia pestis Nepal516] gi|229690520|gb|EEO82574.1| putative type III secretion system ATP synthase [Yersinia pestis biovar Orientalis str. India 195] gi|229696495|gb|EEO86542.1| putative type III secretion system ATP synthase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706205|gb|EEO92213.1| putative type III secretion system ATP synthase [Yersinia pestis Pestoides A] gi|262360419|gb|ACY57140.1| flagellum-specific ATP synthase [Yersinia pestis D106004] gi|262364369|gb|ACY60926.1| flagellum-specific ATP synthase [Yersinia pestis D182038] gi|270337467|gb|EFA48244.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pestis KIM D27] gi|294352798|gb|ADE63139.1| flagellum-specific ATP synthase [Yersinia pestis Z176003] gi|320013869|gb|ADV97440.1| putative type III secretion system ATP synthase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 445 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 158/363 (43%), Positives = 219/363 (60%), Gaps = 6/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117 L +V+ I ++ + P + + G V G R+ A GR+++ LG PIDG Sbjct: 62 LAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP 121 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L G E+ P + RQ VE+ TGIR ID GQRIG+FA +G+GKSTL Sbjct: 122 PL-TGQWR-ELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 LSM D ++++L+GERGREVREF+E L + ++VVVVATSD + R Sbjct: 180 LSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLS 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA T+AEYF +G VLL+ DS+TR+A + REI +GE P A +P SVF+ LPRLLER Sbjct: 240 TATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S++ G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA G YP +D AS Sbjct: 300 TGNSDR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS 357 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + SA + + L ++ ++E + IG Y+ G DL D+A+ + P I F Sbjct: 358 VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF 417 Query: 417 LKQ 419 L+Q Sbjct: 418 LQQ 420 >gi|299066538|emb|CBJ37728.1| Flagellum-specific ATP synthase [Ralstonia solanacearum CMR15] Length = 472 Score = 277 bits (708), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 163/393 (41%), Positives = 237/393 (60%), Gaps = 14/393 (3%) Query: 53 GKNSDN-LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINA 108 G N+D+ L +V+ I+ + + P G + ++ G+ V G FR+ + GRVI+A Sbjct: 75 GANADHVLAEVVGIDGGQIILMPFGSVQGLAAGNEVIALGGRAEFRVGEA--LLGRVIDA 132 Query: 109 LGKPIDGDDSLGKGDLSMEIMS-KVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165 G P+DG L L E K P M R R++ +TG+R ID L GQRIG Sbjct: 133 FGAPLDG---LAAPVLLPEARKLKAAPINPMRRPRIDTILETGVRSIDALLTLGRGQRIG 189 Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATS 224 +FAGSG+GKSTLL M AR + +I+L+GERGREV+EFI+ LG D LK+SVV+VAT+ Sbjct: 190 IFAGSGVGKSTLLGMIARHMDAEVNVIALIGERGREVKEFIDKQLGADGLKRSVVIVATA 249 Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 D+ + R A A+TIAEYF G V+L +DSITRFA + REI +GE P ARGY Sbjct: 250 DQPALSRVRAVYAALTIAEYFRDLGKQVVLTMDSITRFAMARREIGLAAGEPPTARGYTP 309 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 SVF+ELP L ER G + G ITA+++VLV+GD+ N+PI+D++R+ILDGH+VL+R +A Sbjct: 310 SVFAELPELCERCG-TAPSGGAITALLTVLVEGDDLNEPISDALRAILDGHVVLSRQIAH 368 Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404 +G+YP +D L S SRL + +E+ + ++ E R + +G Y G + LD Sbjct: 369 QGQYPAIDVLKSASRLLPDLSTPEERAVGGRAIQILAMLERNRQMVELGAYERGTNPELD 428 Query: 405 KAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 +A+ P + +L Q+ ++ Q++ + Sbjct: 429 RALACAPHLKTWLSQAEGGARRDEAMQQLAAAV 461 >gi|45440276|ref|NP_991815.1| type III secretion system ATPase [Yersinia pestis biovar Microtus str. 91001] gi|45435132|gb|AAS60692.1| putative type III secretion system ATP synthase [Yersinia pestis biovar Microtus str. 91001] Length = 446 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 158/363 (43%), Positives = 219/363 (60%), Gaps = 6/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117 L +V+ I ++ + P + + G V G R+ A GR+++ LG PIDG Sbjct: 63 LAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP 122 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L G E+ P + RQ VE+ TGIR ID GQRIG+FA +G+GKSTL Sbjct: 123 PL-TGQWR-ELDCPPPSPLTRQPVEQMLTTGIRAIDGILSCGEGQRIGIFAAAGVGKSTL 180 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 LSM D ++++L+GERGREVREF+E L + ++VVVVATSD + R Sbjct: 181 LSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLS 240 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA T+AEYF +G VLL+ DS+TR+A + REI +GE P A +P SVF+ LPRLLER Sbjct: 241 TATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLER 300 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S++ G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA G YP +D AS Sbjct: 301 TGNSDR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS 358 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + SA + + L ++ ++E + IG Y+ G DL D+A+ + P I F Sbjct: 359 VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF 418 Query: 417 LKQ 419 L+Q Sbjct: 419 LQQ 421 >gi|224373742|ref|YP_002608114.1| flagellum-specific ATP synthase [Nautilia profundicola AmH] gi|223589927|gb|ACM93663.1| flagellum-specific ATP synthase [Nautilia profundicola AmH] Length = 432 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 159/407 (39%), Positives = 235/407 (57%), Gaps = 14/407 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G + I T L+ +GD V N + LG V ++ + + P E + Sbjct: 20 GIVKKINPTNLIATGLNP--SIGDIVKICSGNHEILGMVTALDENSFVVTPFSFLEGFKI 77 Query: 84 GDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNR 138 GD ++ +I GRV++ PID KGD+ E IM+K M R Sbjct: 78 GDKIYIDENGMQIPVGEGLLGRVVDPFMNPIDD-----KGDIFFETKYPIMTKPISPMKR 132 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198 + + F+T ++ ID GQ++G+FAGSG+GKSTL+SM + D +I+L+GER Sbjct: 133 GVINEVFETKVKAIDGLLTCGKGQKLGIFAGSGVGKSTLMSMIVKGASADIKVIALIGER 192 Query: 199 GREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 GRE+ EFIE LG +L +V++VATSD+S ++RK +A+ +AEYF K +VL ++DS Sbjct: 193 GREIPEFIEHQLGGDLTNTVIIVATSDDSALMRKYGAFSAMAVAEYFKDKNKDVLFLMDS 252 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 ITRFA + REI GE P ++GYP S LP+L+ER G EK+KG+ITA +VLV+GD Sbjct: 253 ITRFAMAQREIGLAMGEPPTSKGYPPSAIMLLPQLMERAG-KEKDKGSITAFFTVLVEGD 311 Query: 319 NHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 + + DPIAD RSILDGH +L+R L + G YPP++ L S SR+ + + + + Sbjct: 312 DTSADPIADQARSILDGHFILSRELTDSGIYPPINILNSASRVMNNVVTKEHLQKAQKFK 371 Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424 L +E + IG Y+ GVD LD+A+++ + +FLKQSP++L Sbjct: 372 KLYSLLKENEVLIRIGAYQKGVDPELDEAINKKEAMENFLKQSPNEL 418 >gi|268316354|ref|YP_003290073.1| ATPase, FliI/YscN family [Rhodothermus marinus DSM 4252] gi|262333888|gb|ACY47685.1| ATPase, FliI/YscN family [Rhodothermus marinus DSM 4252] Length = 450 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 151/333 (45%), Positives = 206/333 (61%), Gaps = 4/333 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++A +PIDG L D + + PP ++R+ ++ TGIR ID F L Sbjct: 108 AMLGRVVDANARPIDGKGPLTVTD-EQPVRNDPPPPLSRRMIDTPLFTGIRAIDTFLTLG 166 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQRIG+FAGSG+GKSTLL M AR D +I+L+GERGREV+EFI D LG + LK+SV Sbjct: 167 RGQRIGIFAGSGVGKSTLLGMIARRARADVNVIALIGERGREVQEFIADNLGPEGLKRSV 226 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV T D++ + R A+ IAEYF +G +VLL++DSITR A + REI GE P Sbjct: 227 VVAVTGDQAAMSRVKGASVAMAIAEYFRDRGLDVLLMMDSITRVAMAQREIGLAVGEPPT 286 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGY SVF+ LPRLLER GP + G IT + +VLVD D+ NDPI D+VR ILDGHIVL Sbjct: 287 TRGYTPSVFAMLPRLLERAGPGAR--GTITGIFTVLVDADDMNDPIGDAVRGILDGHIVL 344 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LA +P +D L SVSR+ + +A+ + LV L+ ++E D+ +G Y G Sbjct: 345 SRRLAHANHFPAIDVLQSVSRVMPRVTTAEHRALVEEARRLLATYQEAEDLIRVGAYEMG 404 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431 +D+A+ + FL+Q +++ + V Q Sbjct: 405 TRPEIDRAILAHEALMAFLRQGVDEVADDPVAQ 437 >gi|331269317|ref|YP_004395809.1| flagellar protein export ATPase FliI [Clostridium botulinum BKT015925] gi|329125867|gb|AEB75812.1| flagellar protein export ATPase FliI [Clostridium botulinum BKT015925] Length = 440 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 159/374 (42%), Positives = 226/374 (60%), Gaps = 8/374 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG---DLVFHWGRFRISPSACWCGRVI 106 ++ +N + +V+ D V + P +GE I +G ++ + S G+V+ Sbjct: 50 IYNKENDPIMCEVVGFKEDNVILMP--LGELIGIGPGCRVIPSKKYLTVKCSEKLLGKVL 107 Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 N LGK + DD + + + P + R+R++ TG+R ID F GQR+G+ Sbjct: 108 NGLGKSLKYDDDEVHIGMEYPLDTAPPDPLKRRRIKDSIATGVRAIDGFLTCGEGQRVGI 167 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 FAGSG+GKST L M AR D +I+L+GERGREV +FIE LG+ LKKSV+V ATSD Sbjct: 168 FAGSGVGKSTTLGMIAREAKADVNVIALIGERGREVLDFIEKDLGEEGLKKSVIVCATSD 227 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 + ++R TA IAEYF KG V+L++DS+TRFA + RE+ GE P +GY S Sbjct: 228 QPALVRLKGAFTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPS 287 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VF+ LPRL+ER G S EKG+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA + Sbjct: 288 VFAMLPRLMERSGMS--EKGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAGK 345 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 YP +D L SVSRL ++ + KK S L+ ++ + D+ IG Y G + +D Sbjct: 346 NHYPAIDVLNSVSRLMNEIADNEHKKAASFARDLLATYKNSEDLINIGAYAQGSNNKVDM 405 Query: 406 AVHQVPIIYDFLKQ 419 A+ +I D+L+Q Sbjct: 406 AIEYNDMINDYLRQ 419 >gi|254499110|ref|ZP_05111800.1| flagellar protein export ATPase FliI [Legionella drancourtii LLAP12] gi|254351649|gb|EET10494.1| flagellar protein export ATPase FliI [Legionella drancourtii LLAP12] Length = 430 Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 154/382 (40%), Positives = 235/382 (61%), Gaps = 5/382 (1%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVIN 107 ++ Q + + +VI VY+ P ++ +G V G I+ G V++ Sbjct: 41 ILDQNQQTVMQAEVIGFEQGKVYLMPYD-SVQVCMGYKVRATGNHLSIAVGEALLGHVVD 99 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 A +PID L + K+ P + R + + TGI+ ID PL GQRIG+F Sbjct: 100 AFAQPIDEQIKLTYTQRVLTKNKKINP-LTRMPINERLTTGIQAIDSLLPLGKGQRIGIF 158 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDE 226 AGSG+GKSTLL ++ + +I+L+GERGREV +FI ++L + LKKSV+VV+ SDE Sbjct: 159 AGSGVGKSTLLGTMVQNLQSEINVIALIGERGREVNDFIVNHLDEATLKKSVLVVSCSDE 218 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 S ++R+ A TA IAEYF + V+L +DSITRFA + REI+ + GE P ARGY SV Sbjct: 219 SALMRRQAVYTATAIAEYFCQQSKQVMLFMDSITRFAMAQREISLSLGEPPTARGYTPSV 278 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F+ LP ++ER G + KE+G+I+A+ +VLV+GD+ N+P+AD +R++LDGHIVL R LA+ G Sbjct: 279 FALLPGIIERTG-NFKEQGSISALYTVLVEGDDFNEPLADHMRALLDGHIVLTRELAQRG 337 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP + L SVSRLA + +E++L++ + + +++ +D+ +G Y+PG + +LD+A Sbjct: 338 HYPAISILQSVSRLAKHIVAPEEQQLINQIIATLSLYQQNKDLIEVGAYKPGNNALLDEA 397 Query: 407 VHQVPIIYDFLKQSPSDLSSED 428 V ++P I L Q + S D Sbjct: 398 VERLPAINQLLIQDKNHFLSFD 419 >gi|254463886|ref|ZP_05077297.1| flagellum-specific ATP synthase [Rhodobacterales bacterium Y4I] gi|206684794|gb|EDZ45276.1| flagellum-specific ATP synthase [Rhodobacterales bacterium Y4I] Length = 442 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 159/421 (37%), Positives = 250/421 (59%), Gaps = 5/421 (1%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD-FVVHQGKNSDNL 59 M+ L+ L + + S L Q G ++ I ++ L+ +GD V+ +G + Sbjct: 1 MKAELQALTR--QIASTRLATQMGRVTGIAGGEIEISGLASAARIGDRLVLRRGPGDELH 58 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 G+V++I + + + P + ++GD V +PS W GRVI+ G+P+DG L Sbjct: 59 GEVLKIKGNNISMLPDRAPDGAAIGDAVLLHPSPEFAPSDHWIGRVIDPFGEPLDGRPML 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G + ++M+ P A R+ + + TG +++ P+ GQR+G+FAGSG+GKS+LL+ Sbjct: 119 -PGSVPRDLMAAPPKAAGRRGMGERLPTGQALLNTILPIVRGQRVGLFAGSGVGKSSLLA 177 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 A++ D V+++L+GERGREV F+E LG + ++++VVV ATSD+S ++R+ A Sbjct: 178 KLAKAMEADVVVMALIGERGREVNHFVEQVLGPEGMRRAVVVAATSDQSALVRRRCAWAA 237 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +T+AE+F +G NVL + DS+TRFA + REI+ SGE P RGYP SV + L ER G Sbjct: 238 MTVAEHFRDQGKNVLFLADSVTRFAEAHREISAASGEAPALRGYPPSVTPLITGLCERAG 297 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P + +G+ITAV SVLV G + ++PIAD +R +LDGHIVL+R +AE GR+P +D SVS Sbjct: 298 PGGEGQGDITAVFSVLVAGSDMDEPIADILRGVLDGHIVLSREIAERGRFPAIDVSRSVS 357 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R A +ADE + + + +E++ + G Y G D +LD+AV P + F Sbjct: 358 RSLPAAATADENAAIQEVRKFLGAYEQSEVMIRAGLYAEGNDAVLDQAVKLWPELDAFFG 417 Query: 419 Q 419 + Sbjct: 418 R 418 >gi|229826305|ref|ZP_04452374.1| hypothetical protein GCWU000182_01677 [Abiotrophia defectiva ATCC 49176] gi|229789175|gb|EEP25289.1| hypothetical protein GCWU000182_01677 [Abiotrophia defectiva ATCC 49176] Length = 423 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 159/391 (40%), Positives = 239/391 (61%), Gaps = 8/391 (2%) Query: 35 TVTCLSQYVCLGDFVVHQGKNSDNLG---QVIRINLDIVYICPVGIGEEISLGDLVFHWG 91 T+ L + D + N + G +V+ + + + P G E + +G LV G Sbjct: 15 TIESLGPSANINDLCIIYANNKYSKGTYAEVVGFRDNRILLMPYGDLEGVGVGSLVESTG 74 Query: 92 R-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 F + G V++ LG+PID + K D S + + P ++RQ +E+ G++ Sbjct: 75 APFHVDVGYDMLGVVVDGLGRPIDTSVTFEKED-SYSVEAMPPDPLSRQMIEEVLPLGVK 133 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 +D + GQR+G+FAGSG+GKSTL+ MFAR+ D +I+L+GERGREVREFIE L Sbjct: 134 AVDALLTVGKGQRVGIFAGSGVGKSTLMGMFARNTKADVNVIALIGERGREVREFIERDL 193 Query: 211 GD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ +++SVVVVATSD+ ++RK A TA IAE+F KG++VLL++DS+TRF+ + REI Sbjct: 194 GEEGMRRSVVVVATSDQPALIRKKAAKTATAIAEFFRDKGEDVLLMMDSLTRFSMAQREI 253 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 SGE PV RGYP SV+SE+P+LLER G + G+IT + +VLVDGD+ N+PIAD+ R Sbjct: 254 GLASGEPPVTRGYPPSVYSEMPKLLERAG--NGKDGSITGLYTVLVDGDDMNEPIADTAR 311 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 ILDGH VL+R+LA++ YP +D L S+SR + K+ + +++ + D+ Sbjct: 312 GILDGHFVLSRTLAQKNHYPAIDVLQSISRCMSAVADKEHKRFAGMMKNVMATYNGAEDL 371 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 IG Y+ G + +D A+ ++ + FL QS Sbjct: 372 INIGAYKSGSNPDIDFAISKIKEVNAFLMQS 402 >gi|163800137|ref|ZP_02194038.1| putative flagellum-specific ATP synthase [Vibrio sp. AND4] gi|159175580|gb|EDP60374.1| putative flagellum-specific ATP synthase [Vibrio sp. AND4] Length = 450 Score = 276 bits (707), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 140/328 (42%), Positives = 212/328 (64%), Gaps = 4/328 (1%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S+ W GRV+N LG+P D L GD +S+E P + R+ V+ G+R I+ Sbjct: 105 SSQWLGRVVNGLGEPFDDGAPLKGGDRVSLEPKPINP--LKRRPVDTPLDVGVRAINGLL 162 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLK 215 + GQRIG+ AGSG+GKS L+ M ++ D +++ L+GERGREVREF+E ++ + + Sbjct: 163 TVGKGQRIGLMAGSGVGKSVLMGMITQNTEADVIVVGLIGERGREVREFVERNFTPEARR 222 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K++++ A +DESP++R A L +AEYF +G +VLL++DS+TR+A + REIA + GE Sbjct: 223 KAIIIAAPADESPLMRLRATLLCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGE 282 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +RGYP SVFS LP+LLER G SE G++TA+ +VL +GD+ DP+ DS R+ILDGH Sbjct: 283 PPASRGYPPSVFSVLPQLLERAGNSENPDGSLTAIYTVLAEGDDQQDPVVDSARAILDGH 342 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 +VL+R LAE+G YP +D AS+SR + ++ L + + +++ +GGY Sbjct: 343 VVLSRQLAEQGHYPAIDINASISRCMSACTHEAHSTIANNFRQLYSNYLQVKELLPLGGY 402 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSD 423 +PG D LD++V P + +L+QS S+ Sbjct: 403 QPGQDPELDQSVSMYPHLRAYLQQSASE 430 >gi|153948731|ref|YP_001402772.1| type III secretion system ATPase [Yersinia pseudotuberculosis IP 31758] gi|152960226|gb|ABS47687.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pseudotuberculosis IP 31758] Length = 445 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 157/363 (43%), Positives = 219/363 (60%), Gaps = 6/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117 L +V+ I ++ + P + + G V G R+ A GR+++ LG PIDG Sbjct: 62 LAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP 121 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L G E+ P + RQ VE+ TG+R ID GQRIG+FA +G+GKSTL Sbjct: 122 PL-TGQWR-ELDCPPPSPLTRQPVEQMLTTGVRAIDGILSCGEGQRIGIFAAAGVGKSTL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 LSM D ++++L+GERGREVREF+E L + ++VVVVATSD + R Sbjct: 180 LSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLS 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA T+AEYF +G VLL+ DS+TR+A + REI +GE P A +P SVF+ LPRLLER Sbjct: 240 TATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S++ G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA G YP +D AS Sbjct: 300 TGNSDR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS 357 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + SA + + L ++ ++E + IG Y+ G DL D+A+ + P I F Sbjct: 358 VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF 417 Query: 417 LKQ 419 L+Q Sbjct: 418 LQQ 420 >gi|86158021|ref|YP_464806.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-C] gi|85774532|gb|ABC81369.1| type III secretion system ATPase, FliI/YscN [Anaeromyxobacter dehalogenans 2CP-C] Length = 435 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 160/384 (41%), Positives = 222/384 (57%), Gaps = 12/384 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDG 115 L +V+ + D + P G + L V GR R+ P GRV++ LG+P+DG Sbjct: 56 LAEVVGLRDDRAVLVPFGELGGVGLDAEVIPTGRPHAIRVGPG--LLGRVLDGLGRPLDG 113 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 L G + P + R+ V G+RV+D GQRIG+FAGSG+GKS Sbjct: 114 A-PLPAGLEEWAVDRPAPNPLARRPVAAPLPLGVRVLDGLLTAGEGQRIGLFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234 TLL AR D ++ LVGERGREVREF+E LG D L +SVVV ATSD ++R A Sbjct: 173 TLLGQLARGARADLCVVCLVGERGREVREFLEGPLGADGLARSVVVAATSDAPALVRLKA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +AE+F+ +GD VLL++DS+TR+A ++RE+ +GE P +GYP SVF+ LPRLL Sbjct: 233 AHVATAVAEWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLL 292 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +G ITAV +VLV G + +PIAD VR ILDGH+VL+R++A GR+P VDPL Sbjct: 293 ERAG--NRARGGITAVYTVLVAGGDLEEPIADEVRGILDGHVVLDRAVAAGGRFPAVDPL 350 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S+SR+ D + L+ RD+ +G YR G D D A+ ++P + Sbjct: 351 QSLSRVMPAVAGPDHLAAAGRVRALLAAHARVRDLVALGAYRAGGDPEADLALARLPALE 410 Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438 FL+Q L F+E ++L+ Sbjct: 411 AFLRQP---LGEPAPFEETLRRLE 431 >gi|260767969|ref|ZP_05876903.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972] gi|260615999|gb|EEX41184.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972] Length = 448 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 227/367 (61%), Gaps = 5/367 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + ++ Y+ P+ +G + +V G + S+ W GRV+N LG+ +D Sbjct: 66 AQVVGFDHNVAYLMPIRRLGGLFAGAKVVPLEGDSTVQLSSQWLGRVVNGLGEALDDGAP 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LRGGDRVSLEPKPINP--LKRRPVDTPLDVGVRTINGLLTVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREFIE L ++ + K++++ A +DESP++R A L Sbjct: 184 MGMITQNTEADVIVVGLIGERGREVREFIERNLTEHTRRKAIIIAAPADESPLMRLRATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AEYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S+ G+++A+ +VL +GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS Sbjct: 304 AGNSDNPDGSLSAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDVNAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + L + + +++ +GGY+PG D LD+AV P + F Sbjct: 364 ISRCMSAVTPEAHVTVANQFRQLYANYLQVKELLPLGGYQPGQDAELDRAVAMYPHLKAF 423 Query: 417 LKQSPSD 423 L+QS + Sbjct: 424 LQQSAKE 430 >gi|330819409|ref|YP_004348271.1| Type III secretion system ATPase [Burkholderia gladioli BSR3] gi|327371404|gb|AEA62759.1| Type III secretion system ATPase [Burkholderia gladioli BSR3] Length = 452 Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 154/367 (41%), Positives = 219/367 (59%), Gaps = 5/367 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ D+ + P E +S V GR I GRV++ LG+PIDG L Sbjct: 72 EVVGFTRDVALLSPFARLEHVSRATQVIGLGRPLSIQVGDQLLGRVLDGLGEPIDGGPPL 131 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D ++ + P M R+ V+ TG+RV+D L GQR+G+FA +G+GKSTL+ Sbjct: 132 DSDDWR-PVIVQPPDPMKRRMVDTPMPTGVRVVDAMMTLGEGQRMGIFAPAGVGKSTLMG 190 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I+L+GERGREVREFIE LG D + +SVVV ATSD S + R A TA Sbjct: 191 MFARGAACDINVIALIGERGREVREFIELILGPDGMARSVVVCATSDRSSMERAKAAHTA 250 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 251 TAIAEYFRDRGLRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 310 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + G+ITA+ +VL + + DP+A+ VR ILDGH++L+R +A +YP +D L S+S Sbjct: 311 MG--QTGSITALYTVLAEDETGGDPVAEEVRGILDGHMILSREIAARNQYPAIDVLGSLS 368 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + S + L+ + E + +G Y+PG + + D+A+ + +I +FL Sbjct: 369 RVMSLVVPDTHNRAASRVRELMAKHREVEVLLQVGEYQPGQNPVADEAIEKADVIREFLC 428 Query: 419 QSPSDLS 425 Q SD + Sbjct: 429 QRTSDYA 435 >gi|330862417|emb|CBX72576.1| putative secretion system apparatus ATP synthase ssaN [Yersinia enterocolitica W22703] Length = 451 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 162/374 (43%), Positives = 224/374 (59%), Gaps = 7/374 (1%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113 + D L +V+ I + P + G + G R+ GRV++ LG+PI Sbjct: 58 SPDMLAEVVAIEQQTALLSPFASSAGLRCGQWISPLGHEHRVRVGVDLLGRVLDGLGEPI 117 Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 D L +G E+ P + RQ V++ TGIR ID GQRIG+FA +G+G Sbjct: 118 DAGPPL-RGHWR-ELDCPPPDPLTRQPVQQILTTGIRAIDGVLSCGEGQRIGIFAAAGVG 175 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232 KS+LLSM R D ++++L+GERGREVREF+E L + ++VVVVATSD + R Sbjct: 176 KSSLLSMLCRGCRADIIVLALIGERGREVREFLEQVLTPETRARTVVVVATSDRPALERL 235 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 TA T+AEYF +G VLL+ DS+TR+A + REI +GE P +PTSVF+ LPR Sbjct: 236 KGIYTATTVAEYFRERGGKVLLMADSLTRYARAAREIGLAAGEHPAMGSFPTSVFAALPR 295 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G SE+ G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA G YP +D Sbjct: 296 LLERAGNSER--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAID 353 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 ASVSR+ + SA+ + L L H+ ++E + +G Y+ G DL D+A+ + P Sbjct: 354 IAASVSRIMPQIVSAEHRALAQKLRHIQACYQEIELLVRVGEYQEGQDLQADEALQRYPG 413 Query: 413 IYDFLKQSPSDLSS 426 I FL+Q S LSS Sbjct: 414 ICAFLQQE-SALSS 426 >gi|283955636|ref|ZP_06373129.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni 1336] gi|283792861|gb|EFC31637.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni 1336] Length = 461 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 166/425 (39%), Positives = 240/425 (56%), Gaps = 12/425 (2%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59 NLE L ++L ++ NL G I+ I++ + L V GD V ++ +N + L Sbjct: 2 NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 V+ I Y+ P E +GD F +I S GRV++ +P DG + Sbjct: 57 AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + M IM AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 117 IEVSKY-MPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M ++ +++L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S S Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ SA+ K L +E + IG Y+ G D LD+A+ + + FL Sbjct: 355 RVMSDIISAEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414 Query: 419 QSPSD 423 Q+P + Sbjct: 415 QNPEE 419 >gi|296125411|ref|YP_003632663.1| ATPase, FliI/YscN family [Brachyspira murdochii DSM 12563] gi|296017227|gb|ADG70464.1| ATPase, FliI/YscN family [Brachyspira murdochii DSM 12563] Length = 485 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 154/352 (43%), Positives = 222/352 (63%), Gaps = 13/352 (3%) Query: 81 ISLGDLVFHWGRFRISPSACWC-----GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 I+ G++V+ + R P + C G V++A GKP+ G + + + Sbjct: 90 ITFGNMVYSFER----PLSVMCCDEILGTVLDARGKPLAGGGH-NFYETPVAVSHNAVNP 144 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 MNR R++K +TG+R ID + GQR+ + +G+G+GKSTLLSM AR+ D +I+L+ Sbjct: 145 MNRPRIKKHIQTGVRAIDGLLTVGQGQRMAIMSGTGVGKSTLLSMIARNTNADVNVIALI 204 Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GER REVR+FIE LG+ LK+SV+VVATSD++P+LR A TA TIAEYF KG NV+ Sbjct: 205 GERRREVRDFIERDLGEEGLKRSVLVVATSDDAPLLRVRAAYTATTIAEYFRDKGKNVMF 264 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DS+TRFA + REI + GE P RGY SVFSEL +LLER G S KG ITA +VL Sbjct: 265 MVDSVTRFALAQREIGLSRGEPPTTRGYTPSVFSELAKLLERTGTS--NKGTITAFYNVL 322 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V+GD+ ++PI D+VR ILDGHIVL+R LA G +P +D S+SR+ ++ S KK Sbjct: 323 VEGDDLDEPITDTVRGILDGHIVLSRDLANRGHFPAIDVNKSISRIMNEVVSNMHKKAAR 382 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + + E +++ +IGGY G +D+A+ P++ +L+Q ++SS Sbjct: 383 EFLKMSADYNEAKELIMIGGYAKGSMPEVDRAIDYKPMMDRYLQQDVYEVSS 434 >gi|315179673|gb|ADT86587.1| FliIL [Vibrio furnissii NCTC 11218] Length = 448 Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 226/367 (61%), Gaps = 5/367 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + ++ Y+ P+ +G + +V G + S+ W GRV+N LG+ +D Sbjct: 66 AQVVGFDHNVAYLMPIRRLGGLFAGAKVVPLEGDSTVQLSSQWLGRVVNGLGEALDDGAP 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LRGGDRVSLEPKPINP--LKRRPVDTPLDVGVRTINGLLTVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREFIE L + + K++++ A +DESP++R A L Sbjct: 184 MGMITQNTEADVIVVGLIGERGREVREFIERNLTEQARRKAIIIAAPADESPLMRLRATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AEYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 244 LCHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S+ G+++A+ +VL +GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS Sbjct: 304 AGNSDNPDGSLSAIYTVLAEGDDQQDPVVDSARAILDGHVVLSRQLAEQGHYPAIDVNAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + L + + +++ +GGY+PG D LD+AV P + F Sbjct: 364 ISRCMSAVTPEAHVTVANQFRQLYANYLQVKELLPLGGYQPGQDAELDRAVAMYPHLKAF 423 Query: 417 LKQSPSD 423 L+QS + Sbjct: 424 LQQSAKE 430 >gi|268680771|ref|YP_003305202.1| flagellar protein export ATPase FliI [Sulfurospirillum deleyianum DSM 6946] gi|268618802|gb|ACZ13167.1| flagellar protein export ATPase FliI [Sulfurospirillum deleyianum DSM 6946] Length = 434 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 161/411 (39%), Positives = 237/411 (57%), Gaps = 7/411 (1%) Query: 17 KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICP 74 K+L G I+ I+S T+ +GD V V + + LG V ++ + +I P Sbjct: 13 KSLSPMFGTITKISST--TIEACGLRPSIGDIVNIVSLDSDKNELGMVTEVDRNAFFISP 70 Query: 75 VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 G E +GD VF + + P GRV++ +P DG ++G S IM Sbjct: 71 FGFIEGFKIGDKVFISEQGMMIPVGEELLGRVVDPFIRPKDGKGAIGARS-SASIMKAPL 129 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 M R + + F G++ ID GQ++G+FAGSG+ KSTL+ M R +++ Sbjct: 130 DPMKRGLINEPFCVGVKTIDGLLTCGKGQKMGIFAGSGVDKSTLMGMIVRGSEAPIKVVA 189 Query: 194 LVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253 L+GERGREV EFIE LG NL+ +V++VATSD+SP++RK +A+++AEYF ++G +VL Sbjct: 190 LIGERGREVPEFIEKNLGGNLENTVIIVATSDDSPLMRKYGAFSAMSVAEYFKNQGRDVL 249 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 ++DS+TRFA + REI GE P ++GYP SV + LP+L+ER G E+ KG+ITA +V Sbjct: 250 FMMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLALLPQLMERAG-KEEGKGSITAFFTV 308 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373 LV+GD+ +DPIAD RSILDGHIVL+R L + G YPP++ S SR+ + KK Sbjct: 309 LVEGDDLSDPIADQSRSILDGHIVLSRELTDYGIYPPINIQNSASRVMGDVIETEHKKAA 368 Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424 L +E + IG Y G D LD A+ + + FL+Q+P ++ Sbjct: 369 MRFKRLNSILKENEVLIRIGAYEKGNDKELDLAISKKEKMNSFLQQAPEEV 419 >gi|86153685|ref|ZP_01071888.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842646|gb|EAQ59858.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp. jejuni HB93-13] Length = 461 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 165/425 (38%), Positives = 241/425 (56%), Gaps = 12/425 (2%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59 NLE L ++L ++ NL G I+ I++ + L V GD V ++ +N + L Sbjct: 2 NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 V+ I Y+ P E +GD F +I S GRV++ +P DG + Sbjct: 57 AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + + M IM AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 117 I-EATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M ++ +++L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S S Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S++ K L +E + IG Y+ G D LD+A+ + + FL Sbjct: 355 RVMSDIISSEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414 Query: 419 QSPSD 423 Q+P + Sbjct: 415 QNPEE 419 >gi|330505658|ref|YP_004382527.1| FliI/YscN family ATPase [Pseudomonas mendocina NK-01] gi|328919944|gb|AEB60775.1| FliI/YscN family ATPase [Pseudomonas mendocina NK-01] Length = 438 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 158/375 (42%), Positives = 219/375 (58%), Gaps = 9/375 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVI 106 V Q S QV+ N DI Y+ P ++ G VF +I S W GRV+ Sbjct: 48 VEQADGSLLDAQVVGFNRDITYLMPFKKPVGLAAGSRVFPAKDEALLQIDES--WLGRVV 105 Query: 107 NALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165 N LG+P+D L G+ L +E+ S P + R+ VE G+R I+ L GQR+G Sbjct: 106 NGLGEPLDERGKLSGRDPLPVELPSVNP--LKRRPVEAALDVGVRAINGLLTLGKGQRVG 163 Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATS 224 +FAGSG+GKS LL M R D V++ L+GERGREV+EFI LG+ L+K+VVVVA + Sbjct: 164 LFAGSGVGKSVLLGMITRQTKADVVVVGLIGERGREVQEFILHSLGEEGLRKAVVVVAPA 223 Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 +ESP++R A +IA YF +G +VLL++DS+TR+A + REIA GE P +GYP Sbjct: 224 NESPLMRLKATELCHSIAAYFRDQGQDVLLLVDSLTRYAMAQREIALALGEPPATKGYPP 283 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 SVF LP L+E G E G+++A+ +VL +GD+H DPI D R+ILDGHIVL+R LA+ Sbjct: 284 SVFGMLPELVESAGNGESGSGSLSAIYTVLAEGDDHQDPIVDCARAILDGHIVLSRRLAD 343 Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404 G YP +D ASVSR + +E+ +++ +GGY PG+D D Sbjct: 344 VGHYPAIDISASVSRCMSQVGEPAHLAAGRQFKEFYSTYEKIKELIPLGGYTPGMDAKTD 403 Query: 405 KAVHQVPIIYDFLKQ 419 +AV P + FL+Q Sbjct: 404 RAVQLAPSLERFLRQ 418 >gi|125657204|gb|ABN48692.1| flagella biosynthesis/type III secretory pathway ATPase [Burkholderia pseudomallei] Length = 417 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 162/397 (40%), Positives = 226/397 (56%), Gaps = 9/397 (2%) Query: 46 GDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACW 101 G+ V + + D + QV+ N + ++ P + G V G RI S W Sbjct: 23 GERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAGAQVLSCERQGLLRIGRS--W 80 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+ IDG SLG GD + + ++ V G+R I+ L G Sbjct: 81 LGRIVNGLGEAIDGRGSLG-GDAVLRAHPAPVNPLRKRPVRDVLDVGVRAINGLLTLGRG 139 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QRIG+ AGSG+GKS LL M R+ D V++ L+GERGREVREF++ LG+ L KSV+V Sbjct: 140 QRIGLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLV 199 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +DESP++R A IA +F G NVLL++DS+TR+A + REIA + GE P R Sbjct: 200 AAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATR 259 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF LP+L+E G E G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R Sbjct: 260 GYPPSVFGMLPQLVETAGNGEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTR 318 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D SVSR + A+ L + +I R E+ RD+ +GGY G D Sbjct: 319 ELAERGHYPAIDVPRSVSRCMSQVAGAEHGALARKVKEMIGRHEQIRDLIALGGYVQGAD 378 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D+AV + I FL+Q D++ D K+L Sbjct: 379 PATDEAVAKAARIDTFLRQDMLDVARHDATLAALKEL 415 >gi|251797442|ref|YP_003012173.1| ATPase, FliI/YscN family [Paenibacillus sp. JDR-2] gi|247545068|gb|ACT02087.1| ATPase, FliI/YscN family [Paenibacillus sp. JDR-2] Length = 441 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 158/371 (42%), Positives = 226/371 (60%), Gaps = 12/371 (3%) Query: 70 VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G IS G D+V + + G+V++ LGKP+DG S + Sbjct: 71 VILMPLGELHAISPGCDVVGTGKPLSVQVGSELLGKVLDGLGKPLDG--SFLPSRMQQYS 128 Query: 129 MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 P + R RV++ G+R ID + GQR+G+FAGSG+GKSTLL M AR+ Sbjct: 129 THNEPSNPLARPRVQETLSIGVRAIDGLLTVGRGQRVGIFAGSGVGKSTLLGMIARNTSA 188 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+L+GERGREV EFIE LG + L +SVV+VATSD+ ++R L A +IAEYF Sbjct: 189 DVNVIALIGERGREVLEFIEKDLGPEGLARSVVIVATSDQPALIRIKGALIATSIAEYFR 248 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G NV+L++DS+TR+A + RE+ GE P RGY SVF+ LP+LLER G G+ Sbjct: 249 DRGLNVMLMMDSVTRYAMAQREVGLAIGEPPATRGYTPSVFATLPKLLERAGTGPN--GS 306 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA +VLVDGD+ N+PIAD+VR ILDGHIVLNR LA +G +P +D LASVSR+ + + Sbjct: 307 ITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRQLANKGHFPAIDVLASVSRVMKEIVT 366 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-- 424 + ++ + L L+ + ++ D+ IG Y+ G + +D A+ + IY F +Q ++ Sbjct: 367 EEHQEAANELKMLLSVYRDSEDLINIGAYQRGTNEKIDTAIENIDAIYQFTRQKTNEKVT 426 Query: 425 ---SSEDVFQE 432 S E + QE Sbjct: 427 LADSKERLLQE 437 >gi|146309428|ref|YP_001189893.1| FliI/YscN family ATPase [Pseudomonas mendocina ymp] gi|145577629|gb|ABP87161.1| ATPase, FliI/YscN family [Pseudomonas mendocina ymp] Length = 438 Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 156/375 (41%), Positives = 219/375 (58%), Gaps = 9/375 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVI 106 V Q S QV+ N DI Y+ P ++ G VF +I S W GRV+ Sbjct: 48 VEQADGSLLDAQVVGFNRDITYLMPFKKPVGLAAGSRVFPAKDEALLQIDES--WLGRVV 105 Query: 107 NALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165 N LG+P+D L G+ L +E+ + P + R+ VE G+R I+ L GQR+G Sbjct: 106 NGLGEPLDERGKLSGRDPLPVELPTVNP--LKRRPVEAALDVGVRAINALLTLGKGQRVG 163 Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATS 224 +FAGSG+GKS LL M R D V++ L+GERGREV+EF+ LG+ L+K+VVVVA + Sbjct: 164 LFAGSGVGKSVLLGMITRQTKADVVVVGLIGERGREVQEFLLHSLGEEGLRKAVVVVAPA 223 Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 +ESP++R A +IA YF +G +VLL++DS+TR+A + REIA GE P +GYP Sbjct: 224 NESPLMRLKATELCHSIAAYFRDQGQDVLLLVDSLTRYAMAQREIALALGEPPATKGYPP 283 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 SVF LP L+E G E G+++A+ +VL +GD+H DPI D R+ILDGHIVL+R LA+ Sbjct: 284 SVFGMLPELVESAGNGESGSGSLSAIYTVLAEGDDHQDPIVDCARAILDGHIVLSRRLAD 343 Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404 G YP +D ASVSR + +E+ +++ +GGY PG+D D Sbjct: 344 VGHYPAIDISASVSRCMSQVGEPAHLGAARQFKEFYSTYEKIKELIPLGGYTPGMDAKTD 403 Query: 405 KAVHQVPIIYDFLKQ 419 +AV P + FL+Q Sbjct: 404 RAVQLAPSLERFLRQ 418 >gi|149377885|ref|ZP_01895614.1| flagellum-specific ATP synthase [Marinobacter algicola DG893] gi|149357827|gb|EDM46320.1| flagellum-specific ATP synthase [Marinobacter algicola DG893] Length = 460 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 154/393 (39%), Positives = 228/393 (58%), Gaps = 8/393 (2%) Query: 32 VYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW 90 V T+ C+ + +GD V G+ + + +V+ D VY+ P+ E + G V Sbjct: 32 VGLTLECVGCPMVVGDRCVITGQGAGTVEAEVVGFEDDRVYLMPLTAIEGLRPGARVVPL 91 Query: 91 G---RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147 R + P GRV+N G+P+DG L + + + + + ++R V + Sbjct: 92 SVASRVPVGPE--LLGRVVNGNGEPLDGKGPL-QAEARVSLSGDIINPLDRAPVRQSMDV 148 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 GIR I+ + GQR+G+FAGSG+GKS LL M R D ++ L+GERGREV+EFIE Sbjct: 149 GIRAINSLMTVGQGQRLGLFAGSGVGKSVLLGMMTRFTNADITVVGLIGERGREVKEFIE 208 Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 D LGD L +SVVV + +D+SP++R A + IAEY+ +G VLL++DS+TR+A + Sbjct: 209 DILGDEGLARSVVVASPADDSPLMRLRAAMLTTRIAEYYRDQGKRVLLLMDSLTRYAQAQ 268 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REIA GE P +GYP SVF++LP+L+ER G G+ITA +VL +GD+ DPIAD Sbjct: 269 REIALAVGEPPATKGYPPSVFAKLPQLVERTGNGRPGGGSITAFYTVLTEGDDQQDPIAD 328 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 + R+ILDGHIVL+R LAEEG YP +D AS+SR+ + + + R+++ Sbjct: 329 AARAILDGHIVLSRRLAEEGHYPAIDVEASISRVMPQVTETEHFARAQRFKQVYSRYQQA 388 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 RD+ +G Y G D D A+ + + FL+Q Sbjct: 389 RDLISVGAYVKGSDPETDFAITHIGNMGQFLQQ 421 >gi|255323214|ref|ZP_05364349.1| flagellar protein export ATPase FliI [Campylobacter showae RM3277] gi|255299737|gb|EET79019.1| flagellar protein export ATPase FliI [Campylobacter showae RM3277] Length = 434 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 159/413 (38%), Positives = 238/413 (57%), Gaps = 7/413 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G I I++ ++ L +GD V + K+ L V + + I P G E Sbjct: 21 GVIERISATTIEISGLRP--SIGDIVQICAKDKSKSGLAMVTEVRQNTALISPFGFVEGY 78 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 +GD V+ + +I GRV++ P DG ++ + + IM AM R Sbjct: 79 KIGDFVYQSDQGMKIPVGDALLGRVVDPFMNPKDGKGAIAATEYA-PIMRAPIDAMKRGL 137 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +++ F G++ ID GQ++G+FAGSG+GKSTL+ M ++ +++L+GERGR Sbjct: 138 IDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKNSQAPIKVVALIGERGR 197 Query: 201 EVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 EV EFIE L +L +VV+VATSD+SP++RK A+++AEYF ++G +VL I+DS+T Sbjct: 198 EVPEFIEKNLRGDLSGTVVIVATSDDSPLMRKYGAFCAMSVAEYFKNQGKDVLFIMDSVT 257 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RFA + REI GE P ++GYP SV + LP+L+ER G E+ KG+ITA +VLVDGD+ Sbjct: 258 RFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG-KEEGKGSITAFFTVLVDGDDM 316 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 +DPIAD RSILDGHIVL+R + + G YPP++ L S SR+ + + + + L L Sbjct: 317 SDPIADQSRSILDGHIVLSREMTDFGIYPPINILNSASRVMSDIATKEHRANAAKLKRLY 376 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 +E + IG Y+ G D LD A+ + I +FLKQ + S + QE+ Sbjct: 377 SLLKENEVLLRIGAYQKGSDKELDLAISKKEFIDNFLKQDAEEGFSFEQTQEL 429 >gi|284006893|emb|CBA72162.1| type III secretion system ATPase [Arsenophonus nasoniae] Length = 429 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 151/355 (42%), Positives = 214/355 (60%), Gaps = 18/355 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 +CP G + +G + G+V++ LG P ++ + + + I Sbjct: 78 VCPTGTSHLVGVGRHLL--------------GKVLDGLGNPFTAENYI-EPEQWYPIYRD 122 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P M R+ +EK GIR ID GQR+G+FA +G GKSTL + RS D ++ Sbjct: 123 APAPMQRKLIEKPLSLGIRAIDGLLTCAEGQRMGIFAAAGGGKSTLFASLIRSADVDVIV 182 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE+ LG+ LK+SV++VATSD I R A A +IAEYF + Sbjct: 183 LALIGERGREVREFIEEDLGEEGLKRSVLIVATSDRPAIERAKAGFVATSIAEYFRDQNM 242 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRL+ER G S+K G+ITA+ Sbjct: 243 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLMERAGQSDK--GSITAL 300 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +PIAD RSILDGHI+L+R LA YP +D L SVSR+ D+ S + Sbjct: 301 YTVLVEGDDMTEPIADETRSILDGHIILSRKLAAASHYPAIDVLRSVSRVMDRVISRKHQ 360 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + L + ++EE + IG Y+PG D + D+A+ + P I +L QS + S Sbjct: 361 QQAQQLRKWLAKYEEIELLLQIGEYQPGNDQLADEAIKRYPQIQSWLCQSTDEKS 415 >gi|94314183|ref|YP_587392.1| flagellum-specific ATP synthase [Cupriavidus metallidurans CH34] gi|93358035|gb|ABF12123.1| flagellum-specific ATP synthase [Cupriavidus metallidurans CH34] Length = 486 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 154/336 (45%), Positives = 207/336 (61%), Gaps = 14/336 (4%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA------MNRQRVEKG 144 G R+ GRV++A G+P+DG LG + S+VP A + R +E Sbjct: 133 GSKRLPVGDGLLGRVLDAAGRPLDG---LGP----ITAASEVPLAGTQINPLTRAPIETV 185 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204 TG+R I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+E Sbjct: 186 LDTGVRAINGMLTVGRGQRMGLFAGSGVGKSVLLGMMARYTNADVIVVGLIGERGREVKE 245 Query: 205 FIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 FIE+ LG+ K+SVVV A +D SP+LR A +AEYF KG +VLLI+DS+TR+A Sbjct: 246 FIENILGEEGRKRSVVVAAPADTSPLLRMQGAAYATRLAEYFRDKGQHVLLIMDSLTRYA 305 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + REIA GE P +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DP Sbjct: 306 MAQREIALAIGEPPATKGYPPSVFAKLPTLVERTGNGPEGGGSITAFYTVLTEGDDQQDP 365 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383 IADS R+ILDGHIVL+RSLAE G YP +D AS+SR A + V L+ R+ Sbjct: 366 IADSARAILDGHIVLSRSLAEAGHYPAIDVEASISRAMTALIDAPQFASVRRFKQLMSRY 425 Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + RD+ +G Y PG D LD A+ P + FL+Q Sbjct: 426 QRNRDLISVGAYVPGSDPELDLAIRMYPRMEAFLQQ 461 >gi|187934498|ref|YP_001885044.1| flagellar protein export ATPase FliI [Clostridium botulinum B str. Eklund 17B] gi|187722651|gb|ACD23872.1| flagellar protein export ATPase FliI [Clostridium botulinum B str. Eklund 17B] Length = 435 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 154/327 (47%), Positives = 214/327 (65%), Gaps = 5/327 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G +I+ LGKP+ G++ + D +E + P + R+R+++ TGIR ID F GQ Sbjct: 102 GEIIDGLGKPLRGEELVQGEDYPLE--NNPPDPLKRKRIKEIMPTGIRAIDGFLTCGDGQ 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKST L M AR D +I+L+GERGREV EFIE LG + +KKSVVV Sbjct: 160 RIGIFAGSGVGKSTTLGMIAREAKADVNVIALIGERGREVLEFIEKDLGPEGMKKSVVVC 219 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+ ++R LTA IAEYF KG V+L++DS+TRFA + RE+ GE P +G Sbjct: 220 ATSDKPALIRLKGALTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKG 279 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF++LP+L+E+ G SE G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RS Sbjct: 280 YTPSVFAKLPKLMEKSGTSED--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRS 337 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA + YP +D L SVSRL + ++ K S L+ ++E+ D+ IG Y G + Sbjct: 338 LAHKNHYPAIDILNSVSRLMNSIAPSEHIKAASIARDLLATYKESEDLINIGAYVKGSNK 397 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +D A+ I +FL+Q+ ++ S+ D Sbjct: 398 KIDLAISYHDKIEEFLRQTVNEKSNFD 424 >gi|146278633|ref|YP_001168792.1| FliI/YscN family ATPase [Rhodobacter sphaeroides ATCC 17025] gi|145556874|gb|ABP71487.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides ATCC 17025] Length = 436 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 162/401 (40%), Positives = 233/401 (58%), Gaps = 2/401 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G ++ I T L+ LGD V+ G N + G+V+R++ V I P E +S+ Sbjct: 22 GRVTEIARGTIAATGLTSGAGLGDRVIVHGTNGEIGGEVLRLSHQEVTILPDAAIEGLSI 81 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 GD V G I+P W GR+++ LG+P+DG L +G ++ + + PPA R+ + Sbjct: 82 GDQVELVGSAEIAPDDSWIGRIVDPLGRPLDGR-PLFRGPIARPLRAPAPPAARRRSLGP 140 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 TG+ V D PL GQR G+FAGSG+GKS+LL+ FAR D V+I L+GERGRE+R Sbjct: 141 RLPTGVAVFDTMLPLVQGQRTGLFAGSGVGKSSLLAKFARGVGADVVVIGLIGERGRELR 200 Query: 204 EFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 +F E LG + +SVVV ATSD+SP++R+ A+ +AE+F +G +VLL+ DSITRF Sbjct: 201 DFTERVLGARGMARSVVVTATSDQSPLMRRRCGWAAMAVAEHFRDQGLHVLLLADSITRF 260 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A + RE+A GE RG+P S + L ER GP + G+ITAV SVLV G + + Sbjct: 261 AEAHREVALAGGEEASMRGFPPSTAHTIMSLAERAGPGAEGTGDITAVFSVLVAGSDMEE 320 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 P+AD +R +LDGH+V++R +AE GR+P +D L SVSR A S E L+ L+ Sbjct: 321 PVADILRGVLDGHVVMDRRIAERGRFPAIDLLRSVSRSLPDAASDPENDLIVEARRLLGA 380 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 ++ + G Y G D +D A+ P + FL + D Sbjct: 381 WDRAEMMIQAGLYAKGSDPQVDAAIRVWPALDGFLAEDAPD 421 >gi|218703514|ref|YP_002411033.1| lateral flagellar export/assembly protein [Escherichia coli UMN026] gi|293403344|ref|ZP_06647435.1| fliI [Escherichia coli FVEC1412] gi|298378956|ref|ZP_06988837.1| fliI [Escherichia coli FVEC1302] gi|218430611|emb|CAR11477.1| Flagellum-specific ATP synthase, Lateral flagellar export/assembly protein [Escherichia coli UMN026] gi|291429197|gb|EFF02217.1| fliI [Escherichia coli FVEC1412] gi|298280069|gb|EFI21573.1| fliI [Escherichia coli FVEC1302] Length = 445 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 155/383 (40%), Positives = 224/383 (58%), Gaps = 13/383 (3%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S D ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSLDHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438 FL+Q D+ + + +LQ Sbjct: 415 FLRQ---DMREPAALELVQSRLQ 434 >gi|134280666|ref|ZP_01767376.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei 305] gi|167725915|ref|ZP_02409151.1| flagellum-specific ATP synthase [Burkholderia pseudomallei DM98] gi|167905075|ref|ZP_02492280.1| flagellum-specific ATP synthase [Burkholderia pseudomallei NCTC 13177] gi|134247688|gb|EBA47772.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei 305] Length = 435 Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 162/397 (40%), Positives = 226/397 (56%), Gaps = 9/397 (2%) Query: 46 GDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACW 101 G+ V + + D + QV+ N + ++ P + G V G RI S W Sbjct: 41 GERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAGAQVLSCERQGLLRIGRS--W 98 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+ IDG SLG GD + + ++ V G+R I+ L G Sbjct: 99 LGRIVNGLGEAIDGRGSLG-GDAVLRAHPAPVNPLRKRPVRDVLDVGVRAINGLLTLGRG 157 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QRIG+ AGSG+GKS LL M R+ D V++ L+GERGREVREF++ LG+ L KSV+V Sbjct: 158 QRIGLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLV 217 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +DESP++R A IA +F G NVLL++DS+TR+A + REIA + GE P R Sbjct: 218 AAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATR 277 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF LP+L+E G E G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R Sbjct: 278 GYPPSVFGMLPQLVETAGNGEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTR 336 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D SVSR + A+ L + +I R E+ RD+ +GGY G D Sbjct: 337 ELAERGHYPAIDVPRSVSRCMSQVAGAEHGALARKVKEMIGRHEQIRDLIALGGYVQGAD 396 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D+AV + I FL+Q D++ D K+L Sbjct: 397 PATDEAVAKAARIDTFLRQDMLDVARHDATLAALKEL 433 >gi|15834665|ref|NP_296424.1| type III secretion system ATPase [Chlamydia muridarum Nigg] gi|270284830|ref|ZP_06194224.1| type III secretion system ATPase [Chlamydia muridarum Nigg] gi|270288859|ref|ZP_06195161.1| type III secretion system ATPase [Chlamydia muridarum Weiss] gi|301336210|ref|ZP_07224412.1| type III secretion system ATPase [Chlamydia muridarum MopnTet14] gi|7190080|gb|AAF38931.1| type III secretion cytoplasmic ATPase SctN [Chlamydia muridarum Nigg] Length = 442 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 161/386 (41%), Positives = 239/386 (61%), Gaps = 16/386 (4%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + V++ P+G +S V G I A GRV+N LG+PID + Sbjct: 61 EVVGFTQNFVFLSPLGELSGVSPSSEVIATGLPLHIRAGAGLLGRVLNGLGEPIDIET-- 118 Query: 120 GKGDL----SMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 KG L S+ + K PP ++R+++ TG+R ID + GQRIG+FAG+G+GK Sbjct: 119 -KGPLENVDSIYPIFKAPPDPLHREKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGK 177 Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232 S+LL M AR ++ D +I+L+GERGREVREFIE+ LG+ +K+SV+VV+TSD+S LR Sbjct: 178 SSLLGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRL 237 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LP+ Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPK 297 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G S EKG ITA +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+ YP +D Sbjct: 298 LLERAGAS--EKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAID 355 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SRL ++++++ ++ +++ + IG YR G D +D A+ + Sbjct: 356 VLASISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 415 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438 + FLKQ D+ + ++E ++L+ Sbjct: 416 LNRFLKQ---DIHEKTNYEEAAQQLR 438 >gi|171915738|ref|ZP_02931208.1| type III secretion system ATPase [Verrucomicrobium spinosum DSM 4136] Length = 444 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 157/385 (40%), Positives = 227/385 (58%), Gaps = 16/385 (4%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117 + +V+ ++V + P+G E IS V G R+ GRV++ LG P DG Sbjct: 65 MAEVVGFAKNLVLLTPLGELEGISSSTEVTPTGEVHRVPVGPAMLGRVLDGLGNPSDG-- 122 Query: 118 SLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 KG + +E + + P AM RQ + G+R +D GQR+G+FA +G G Sbjct: 123 ---KGPIEIEEYYAVTADPPNAMTRQLISTPIHLGVRALDGLLTCGEGQRMGIFAAAGGG 179 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232 KSTLLS R+ D V++SL+GERGREVREF+E LG D +K++V V+ATSD + R Sbjct: 180 KSTLLSQIIRNTEADIVVLSLIGERGREVREFLERDLGEDGVKRAVTVIATSDRPAMERL 239 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A IAEYF KG VLL++DS+TRFA ++REI +GE P RG+P SVF+ LP+ Sbjct: 240 KCAYVATAIAEYFRDKGRKVLLLMDSVTRFARALREIGLAAGEPPTRRGFPPSVFATLPK 299 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 ++ER G S G+ITA+ +VLV+GD+ +P+AD RSILDGHI+L+R L YP +D Sbjct: 300 MMERAGCSAN--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLGSANHYPAID 357 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LASVSRL + D ++ L +L+ +++E + IG Y+ G D D+A+ +V Sbjct: 358 VLASVSRLMTAIATPDHQRAAGKLRNLLAKYQEVELLVRIGEYKKGSDASSDEAIAKVDA 417 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437 I +FLKQ L + F++ + + Sbjct: 418 INNFLKQG---LREQSTFEQTLQAM 439 >gi|168187563|ref|ZP_02622198.1| flagellar protein export ATPase FliI [Clostridium botulinum C str. Eklund] gi|169294576|gb|EDS76709.1| flagellar protein export ATPase FliI [Clostridium botulinum C str. Eklund] Length = 438 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 171/427 (40%), Positives = 247/427 (57%), Gaps = 19/427 (4%) Query: 15 YSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 Y++ LV Q + +T + VC ++ +N + +V+ D V + P Sbjct: 21 YTEGLVKQ---VIGLTIEVEGIKAFVGEVC----TIYNKENEPIMCEVVGFKEDNVILMP 73 Query: 75 VGIGEEISLGD---LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 +GE I +G +V + S G+V+N LGKP++ ++ L G + + + Sbjct: 74 --LGELIGIGPGCRVVPSKKYLSVKCSEKLLGKVLNGLGKPLNVEEKLPLG-IDYPLDTA 130 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P + R+R++ TG+R ID F GQRIG+FAGSG+GKST L M AR D + Sbjct: 131 PPDPLRRRRIKDEIATGVRAIDGFLTCGEGQRIGIFAGSGVGKSTTLGMIAREAKADINV 190 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I+L+GERGREV +FIE LG+ LKKSV+V ATSD+ ++R TA IAEYF KG Sbjct: 191 IALIGERGREVLDFIEKDLGEEGLKKSVIVCATSDQPALVRLKGAFTATAIAEYFRDKGK 250 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 V+L++DS+TRFA + RE+ GE P +GY SVF+ LPRL+ER G S+K G+ITA Sbjct: 251 KVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERSGMSDK--GSITAF 308 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA + YP +D L SVSRL + + K Sbjct: 309 YTVLVDGDDFNEPIADAVRGILDGHIVLSRALAGKNHYPAIDILNSVSRLMSEIAKDEHK 368 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430 K S L+ ++ + D+ IG Y G + +D A+ + ++L+Q + S F Sbjct: 369 KAASKARDLLATYKNSEDLINIGAYVKGSNPKVDMAIQYNDKLNEYLRQGIKEHSE---F 425 Query: 431 QEITKKL 437 QE +L Sbjct: 426 QESVTRL 432 >gi|293408356|ref|ZP_06652195.1| flagellar protein export ATPase FliI [Escherichia coli B354] gi|291471534|gb|EFF14017.1| flagellar protein export ATPase FliI [Escherichia coli B354] Length = 445 Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 155/383 (40%), Positives = 224/383 (58%), Gaps = 13/383 (3%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSESS-GSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S D ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSLDHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438 FL+Q D+ + + +LQ Sbjct: 415 FLRQ---DMREPAALELVQSRLQ 434 >gi|78778279|ref|YP_394594.1| flagellum-specific ATP synthase [Sulfurimonas denitrificans DSM 1251] gi|78498819|gb|ABB45359.1| ATPase FliI/YscN [Sulfurimonas denitrificans DSM 1251] Length = 436 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 168/425 (39%), Positives = 239/425 (56%), Gaps = 7/425 (1%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYIC 73 +K V G + I + T LS V + D V + + +G V I+ I +I Sbjct: 12 NKKYSVAFGEVVKINATVITARGLS--VSISDIVKIISNESAQETIGMVTEIDGLIFFIT 69 Query: 74 PVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132 P E GD VF I S+ GRV++ +PIDG S+ LS I + + Sbjct: 70 PFSFVEGFRSGDRVFLDQTGLNIPVSSSLLGRVVDPFMRPIDGKGSINDSKLSPIIKAPI 129 Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 AM R +++ F G++ ID GQ++G+FAGSG+GKSTL+ M R ++ Sbjct: 130 A-AMKRGMIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRGANAPIKVV 188 Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252 +L+GERGREV EFIE LG NL+ +V+VVATSD+SP++RK A+++AE+F +G +V Sbjct: 189 ALIGERGREVPEFIEKNLGGNLENTVIVVATSDDSPLMRKYGAFAAMSVAEFFKDQGLDV 248 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 L I+DS+TRFA + REI GE P ++GYP S + LP+L+ER G E+ KG+ITA + Sbjct: 249 LFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-KEEGKGSITAFFT 307 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 VL++GD+ DPIAD RSILDGHIVL+R + + G YPPV L S SR+ + + + + Sbjct: 308 VLIEGDDMGDPIADQSRSILDGHIVLSREMTDFGIYPPVHILNSASRVMNDIITPEHLRA 367 Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 V L +E + IG Y G D LD+A+ + + FL Q+ S S D E Sbjct: 368 VQKFRRLYTLLKENEVLIRIGAYTKGSDSELDEAMAKKSEMEKFLMQNSSTQSDFDETVE 427 Query: 433 ITKKL 437 KL Sbjct: 428 TLLKL 432 >gi|119469988|ref|ZP_01612793.1| flagellum-specific ATP synthase [Alteromonadales bacterium TW-7] gi|119446698|gb|EAW27971.1| flagellum-specific ATP synthase [Alteromonadales bacterium TW-7] Length = 444 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 144/332 (43%), Positives = 211/332 (63%), Gaps = 6/332 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GRV++ LG+P+DG LGK + ++ + R+ + + G+R I+ Sbjct: 103 SLLGRVVDGLGRPLDG---LGKINAEHYLKFAQNTINPLARRPISQPMDVGVRAINSVIT 159 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKK 216 + GQR+G+FAGSG+GKS LL M R D +++ LVGERGREV+EFIE+ LG+ K+ Sbjct: 160 VGQGQRMGLFAGSGVGKSVLLGMMTRGSEADVIVVGLVGERGREVKEFIEEILGEEGRKR 219 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 SVVV A +D SP++R +AVTIAEYF +G NVLL+LDS+TR+A + REIA GE Sbjct: 220 SVVVAAPADSSPLMRLKGCESAVTIAEYFRDQGLNVLLLLDSVTRYAMAQREIALAVGEP 279 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P +GYP SVF++LP L+ER G + +G ITA +VL +GD+ DPIAD+ R+ILDGHI Sbjct: 280 PATKGYPPSVFAKLPALVERAGNGGEGQGAITAFFTVLSEGDDMQDPIADAARAILDGHI 339 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LA+ G YP +D S+SR+ + S + L + +++ +D+ +G Y+ Sbjct: 340 VLSRELADSGHYPAIDIEKSISRVMPQVVSEPHMQQARVLKQVYSMYQQNKDMITLGAYQ 399 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 G D +LD+A++ +P + FL+Q D+ S D Sbjct: 400 KGTDPMLDQAINMMPRVNGFLQQGMRDVISYD 431 >gi|288553062|ref|YP_003424997.1| flagellum-specific ATP synthase [Bacillus pseudofirmus OF4] gi|288544222|gb|ADC48105.1| flagellum-specific ATP synthase [Bacillus pseudofirmus OF4] Length = 435 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 152/362 (41%), Positives = 226/362 (62%), Gaps = 5/362 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + V + P+ +EI+ G LV G I + G+V++ G+ +D L Sbjct: 58 EVVGFRDEYVLLMPLNGIQEIAPGSLVEATGSPLEIKVGSGLIGKVVDGCGELLD-QQKL 116 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 KG S ++ P + R R+E G+R ID + GQRIG+FAGSG+GKSTLL+ Sbjct: 117 PKGLTSFPTDNEPPNPLKRPRIEHAMSLGVRAIDSLFTVGKGQRIGIFAGSGVGKSTLLA 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M A++ D +I+L+GERGREV++FIE LG + L ++++VVATSD+ ++R +TA Sbjct: 177 MLAKNSSADLNVIALIGERGREVKDFIERDLGAEGLSRTILVVATSDQPALMRIKGAMTA 236 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF ++G +V L++DS+TRFA + RE+ +GE P +GY SVF+ LP+LLER G Sbjct: 237 TAIAEYFRNQGLDVNLMMDSVTRFAMAQREVGLATGEPPTTKGYTPSVFAMLPKLLERSG 296 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 KG+ITA +VLVDGD+ N+PIAD+VR ILDGH+VL+R LA +G++P ++ L SVS Sbjct: 297 --TDAKGSITAFYTVLVDGDDMNEPIADAVRGILDGHLVLDRKLANKGQFPAINVLKSVS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + K+ + LI +EE D+ IG Y+ G +D+A+ P I +FL Sbjct: 355 RVMSDLVNPIHKQAAERVRKLIATYEEAEDLINIGAYKRGSSKEIDEAIQAYPAIIEFLT 414 Query: 419 QS 420 Q+ Sbjct: 415 QA 416 >gi|254445953|ref|ZP_05059429.1| flagellar protein export ATPase FliI [Verrucomicrobiae bacterium DG1235] gi|198260261|gb|EDY84569.1| flagellar protein export ATPase FliI [Verrucomicrobiae bacterium DG1235] Length = 440 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 156/356 (43%), Positives = 222/356 (62%), Gaps = 5/356 (1%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D+ G +I GRV++ +G+PIDG + D + KVP + R+R+ Sbjct: 88 DVKLSSGFNKIPSGNEVLGRVVDGMGRPIDGIGPMHYQDPG-SMTGKVPNPLLRKRITVP 146 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204 F TG++ ID+F+P+ GQR+GVFAGSG+GKSTLL M AR D +I+LVGERGRE+RE Sbjct: 147 FNTGVKAIDLFSPVGEGQRMGVFAGSGVGKSTLLGMLARGSNADVNVIALVGERGRELRE 206 Query: 205 FIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 FIE LG + + ++VVVVATSD+S +R A A +IAE F G VL ++DS+TRFA Sbjct: 207 FIEKDLGPEGMARTVVVVATSDQSAPMRLRAANMATSIAENFRDSGKRVLFLMDSVTRFA 266 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + REI GE P +RGY SVFS LPRLLER G S +KG ITA +VLV+GD+ N+P Sbjct: 267 MAQREIGLAVGEPPASRGYTPSVFSTLPRLLERSGNS--DKGTITAFYTVLVEGDDLNEP 324 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383 IAD+VR ILDGHIVL+R LA +P +D L S+SRL + + +E + + Sbjct: 325 IADAVRGILDGHIVLSRQLATANHFPAIDVLESISRLRNDISTEEELATAGLARDYLALY 384 Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438 + DI +G Y G + +D A+ + ++LKQS ++ + E+ +Q++ + ++ Sbjct: 385 RKNEDIVNLGAYVRGANQKIDAAIIANERVMNYLKQSYTECVPREECYQKLAELIR 440 >gi|77918793|ref|YP_356608.1| flagellum-specific ATP synthase FliI [Pelobacter carbinolicus DSM 2380] gi|77544876|gb|ABA88438.1| type III secretion system ATPase, FliI/YscN [Pelobacter carbinolicus DSM 2380] Length = 433 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 150/322 (46%), Positives = 209/322 (64%), Gaps = 3/322 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+A+G+PID D L + M + + M R ++ GIR I+ GQ Sbjct: 98 GRVIDAMGQPID-DGPLPVRETDMPLYALPAGPMERDTIDTPLDLGIRAINGLLTCGQGQ 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+ AGSG+GKSTLL M A++ D +I+L+GERGREVREFIE LG + L +SVV+V Sbjct: 157 RMGIMAGSGVGKSTLLGMIAQNTQADVNVIALIGERGREVREFIERDLGPEGLARSVVIV 216 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+SP+LR A T+AEYFSS+G NVLL++DS+TRFA ++RE+ GE P +G Sbjct: 217 ATSDQSPLLRMRGAFVATTVAEYFSSQGLNVLLMMDSVTRFAMAMREVGLAIGEPPTTKG 276 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF+ LP+LLER G S + G+IT + +VLV+GD+ N+PIAD+VRSILDGHIVL+R Sbjct: 277 YTPSVFATLPKLLERAG-SFRNSGSITGLYTVLVEGDDMNEPIADAVRSILDGHIVLSRR 335 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA + YP +D L S SR+ + + L L ++ +EE D+ IG Y+ G + Sbjct: 336 LAAKNHYPCIDILHSASRVMNAVVDPGHQDLAGRLREILATYEEAEDLINIGAYKKGSNP 395 Query: 402 ILDKAVHQVPIIYDFLKQSPSD 423 +D A+ + + FL+Q S+ Sbjct: 396 KIDTALSHIDNVLRFLRQRVSE 417 >gi|194292869|ref|YP_002008776.1| flii: flagellar biosynthesis protein; flagellum-specific ATP synthase [Cupriavidus taiwanensis LMG 19424] gi|193226773|emb|CAQ72724.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP synthase [Cupriavidus taiwanensis LMG 19424] Length = 502 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 152/333 (45%), Positives = 209/333 (62%), Gaps = 8/333 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM---SKVPPAMNRQRVEKGFKT 147 G R+ A GRV++A G+P+DG LG +ME+ ++ P M R +E T Sbjct: 140 GSKRLPVGAGLLGRVLDAAGRPLDG---LGPLAAAMEVPLAGEQINPLM-RAPIETVLDT 195 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G+R I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE Sbjct: 196 GVRAINGMLTVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIE 255 Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + LG + ++SVVV A +D SP+LR A +AEYF +G +VLLI+DS+TR+A + Sbjct: 256 NILGPEGRRRSVVVAAPADCSPLLRMQGAAYATRLAEYFRDQGQHVLLIMDSLTRYAMAQ 315 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REIA GE P +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIAD Sbjct: 316 REIALAIGEPPATKGYPPSVFAKLPTLVERTGNGPEGGGSITAFYTVLTEGDDQQDPIAD 375 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 S R+ILDGHIVL+RSLAE G YP +D AS+SR ++ V L+ R++ Sbjct: 376 SARAILDGHIVLSRSLAEAGHYPAIDVEASISRAMTALIPHEQFGSVRRFKQLMSRYQRN 435 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 RD+ +G Y PG D LD A+ P + FL+Q Sbjct: 436 RDLISVGAYVPGNDPELDLAIQLHPRMEAFLQQ 468 >gi|157147117|ref|YP_001454436.1| hypothetical protein CKO_02894 [Citrobacter koseri ATCC BAA-895] gi|157084322|gb|ABV14000.1| hypothetical protein CKO_02894 [Citrobacter koseri ATCC BAA-895] Length = 439 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 150/365 (41%), Positives = 215/365 (58%), Gaps = 4/365 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 QV+ + D+ Y+ P + G VF G+ + W GRV+N LG+P+D L Sbjct: 59 QVVGFDRDVTYLMPFKHPSGLIAGARVFPAGKTEGVMIGDQWLGRVVNGLGEPLDNKGKL 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G L + + +V P + RQ V G+R I+ + GQR+G+ AGSG+GKS LL Sbjct: 119 GGDTLLAQQLPQVHP-LKRQPVHAPLDVGVRAINGLLTIGKGQRVGLMAGSGVGKSVLLG 177 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTA 238 M R + V++ L+GERGREV+EFIE+ L + L KSV+V A +DESP++R A Sbjct: 178 MITRYTRAEVVVVGLIGERGREVKEFIENALQAEGLAKSVIVAAPADESPLMRIKATELC 237 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 TIA Y+ KG +VLL++DS+TR+A + REIA + GE P +GYP S F +PRL+E G Sbjct: 238 HTIASYYRDKGKDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPRLVESAG 297 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 SE E G++TA+ +VL +GD+ DPI D R++LDGHIVL+R LAE G YP +D S+S Sbjct: 298 NSESE-GSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRHLAEAGHYPAIDVGQSIS 356 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R + + + +L L ++ + + +GGY G D + D+AV P I FL+ Sbjct: 357 RCMSQVTEREHQLAARTLKQLYAEYQSIKPLIPLGGYVAGADPLADRAVRLSPAINQFLQ 416 Query: 419 QSPSD 423 Q D Sbjct: 417 QEVQD 421 >gi|160902822|ref|YP_001568403.1| flagellar protein export ATPase FliI [Petrotoga mobilis SJ95] gi|160360466|gb|ABX32080.1| flagellar protein export ATPase FliI [Petrotoga mobilis SJ95] Length = 442 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 172/419 (41%), Positives = 252/419 (60%), Gaps = 16/419 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82 G IS I V T+ + V LGD + K+ + + + + + V + P+ I Sbjct: 27 GKISRIVGV--TIESIGPSVALGDLCRIKLKDGSKIFAETVGFSDNKVLLMPLEDVSGIY 84 Query: 83 LGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 +G V + + S+ G V++ LG+ +DG S K S I P + R R+ Sbjct: 85 VGAPVERVDSKINVKISSDLLGHVLDGLGRSMDG--SKVKSYESKSIYRSAPNPLLRNRI 142 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++ G+R ID F L GQRIG+ AGSG+GKSTLL M AR+ D +I L+GERGRE Sbjct: 143 KEPLSVGVRAIDAFLTLGKGQRIGIMAGSGVGKSTLLGMIARNTEADINVIGLIGERGRE 202 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 V++FIE LG+ LKKSV++V+TSD +LR A TA TIAEYF G NVL+++DSIT Sbjct: 203 VKDFIEKDLGEEGLKKSVLIVSTSDSPALLRVKALYTATTIAEYFRDLGYNVLMMVDSIT 262 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+A + REI + GE P RGY SVF+ +P++LER G S +KG++TA+ +VLV+ D+ Sbjct: 263 RWAMAQREIGLSIGEPPTTRGYTPSVFANMPKILERAGNS--QKGSMTAIYTVLVEADDM 320 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL--TH 378 NDPI D+VRSI+DGHIVL+RSLA+ YPP+D L+SVSRL + DEK L +++ Sbjct: 321 NDPIGDAVRSIVDGHIVLSRSLADSSHYPPIDILSSVSRLMKEV--VDEKHLKAAMFIRD 378 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 + + ++D+ +G Y+ G + +D A+ ++ I +FL Q + + F++ KKL Sbjct: 379 IYASYMNSKDLIEVGAYKKGSNKKVDIALEEIENINNFLTQR---IEEKAPFEQTLKKL 434 >gi|119715003|ref|YP_921968.1| FliI/YscN family ATPase [Nocardioides sp. JS614] gi|119535664|gb|ABL80281.1| type III secretion system ATPase, FliI/YscN [Nocardioides sp. JS614] Length = 435 Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 166/405 (40%), Positives = 242/405 (59%), Gaps = 9/405 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G + + + TV+ +S LGD + QG +V+ ++ P+G + + Sbjct: 22 GRVVGLLGLRVTVSGVS--AALGDLLEVQGLTGPVPVEVVASGDGMLTCLPLGDTTGLRV 79 Query: 84 GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQRV 141 GD V + G RI GRV++ LG+P+D D DL ++ +PPA ++R R+ Sbjct: 80 GDHVVNHGEGLRIPVGEALRGRVLDGLGRPMD--DGPALDDLPTVVVDNLPPAALSRPRI 137 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++ G+R +D GQR+G+ AGSG+GKS+LLSM AR + +I+L+GERGRE Sbjct: 138 DQQLGLGVRAMDALISCGRGQRLGIMAGSGVGKSSLLSMIARGTDAEISVIALIGERGRE 197 Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 VREF+E+ LG L++S+VVVATSDE P++R A A IAE+F G +V+L++DS+T Sbjct: 198 VREFLENDLGPAGLRRSIVVVATSDEPPVVRLRAAFVATRIAEWFRDSGRHVVLMMDSLT 257 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R A + REI ++GE P RG+P SVF+ LPRLLER G S +G+IT + +VLV+GD+ Sbjct: 258 RVALAQREIGLSAGEPPATRGFPPSVFALLPRLLERAGTS--PEGSITGLYTVLVEGDDL 315 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 DPI DS RSILDGH+VL+R LA G +P +D L S+SR+A + L L+ Sbjct: 316 QDPIGDSARSILDGHVVLSRDLATSGHFPSIDVLESISRVASAIIEPSGRADGIRLRRLL 375 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + R++ IG Y G D D A+ +P I DFL+Q SD++ Sbjct: 376 AAYRSVRELVEIGAYVAGSDADADDALALMPRINDFLRQDMSDVT 420 >gi|225619607|ref|YP_002720864.1| flagellar biosynthesis/type III secretory pathway ATPase [Brachyspira hyodysenteriae WA1] gi|225214426|gb|ACN83160.1| flagellar biosynthesis/type III secretory pathway ATPase [Brachyspira hyodysenteriae WA1] Length = 484 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 165/395 (41%), Positives = 237/395 (60%), Gaps = 20/395 (5%) Query: 42 YVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC 100 + LGD ++ NS + I V + G I+ G++V+ + R P + Sbjct: 50 FCKLGDMCRIYMNDNSYLDAEAIGFRNQDVLLATYGPVNGITFGNMVYSFER----PLSV 105 Query: 101 WC-----GRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVEKGFKTGIRVI 152 C G V++A GKP+ G G I S V P MNR R+ K +TG+R I Sbjct: 106 MCCDEILGTVLDARGKPLAGG---GHNFYETPIPVSHSAVNP-MNRPRINKHIQTGVRAI 161 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 D + GQR+ + +G+G+GKSTLLSM AR+ D +I+L+GER REVR+FIE LG+ Sbjct: 162 DGLLTVGQGQRMAIMSGTGVGKSTLLSMIARNTNADVNVIALIGERRREVRDFIERDLGE 221 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 LK+S++VVATSD++P+LR A TA TIAEYF KG NV+ ++DS+TRFA + REI Sbjct: 222 EGLKRSILVVATSDDAPLLRVRAAYTATTIAEYFRDKGKNVMFMVDSVTRFALAQREIGL 281 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 + GE P RGY SVFSEL +LLER G S KG+ITA +VLV+GD+ ++PI D+VR I Sbjct: 282 SRGEPPTTRGYTPSVFSELAKLLERTGTS--SKGSITAFYNVLVEGDDLDEPITDAVRGI 339 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHIVL+R LA G +P +D S+SR+ ++ S K+ + + E +++ + Sbjct: 340 LDGHIVLSRDLANRGHFPAIDVNKSISRIMNEVVSNMHKRAAREFLKMSADYNEAKELIM 399 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 IGGY G +D+A+ P++ +L+Q ++SS Sbjct: 400 IGGYAKGSMPEVDRAIDYKPMMDRYLQQDVYEVSS 434 >gi|57168630|ref|ZP_00367762.1| flagellum-specific ATP synthase [Campylobacter coli RM2228] gi|305432742|ref|ZP_07401902.1| flagellar protein export ATPase FliI [Campylobacter coli JV20] gi|57019911|gb|EAL56591.1| flagellum-specific ATP synthase [Campylobacter coli RM2228] gi|304444251|gb|EFM36904.1| flagellar protein export ATPase FliI [Campylobacter coli JV20] Length = 461 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 165/425 (38%), Positives = 240/425 (56%), Gaps = 12/425 (2%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59 NLE L ++L ++ NL G I+ I++ + L V GD V ++ +N + L Sbjct: 2 NLEKLRSKLGKE---NLSAVFGEITKISATSIEIRGLKTGV--GDIIKLVSNENENLNTL 56 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 V+ I Y+ P E +GD F +I S GRV++ +P DG + Sbjct: 57 AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + + M IM AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 117 I-EATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M ++ +++L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S S Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S + K L +E + IG Y+ G D LD+A+ + + FL Sbjct: 355 RVMGDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAIAKKEFMQKFLG 414 Query: 419 QSPSD 423 Q+P + Sbjct: 415 QNPEE 419 >gi|167567363|ref|ZP_02360279.1| flagellum-specific ATP synthase [Burkholderia oklahomensis EO147] Length = 435 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 167/380 (43%), Positives = 232/380 (61%), Gaps = 24/380 (6%) Query: 61 QVIRINLDIVYICP----VGI--GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID 114 QV+ N + Y+ P VG+ G ++ D G R+ + W GRVIN LG+PID Sbjct: 57 QVVGFNREESYLMPFKKPVGLVAGAQVLARD---RKGALRVGRA--WLGRVINGLGEPID 111 Query: 115 GDDSLGKGDLSMEIMSKVPPAMN--RQR-VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 G LG GD +++++ P A+N R+R V G+R I+ L GQR+G+ AGSG Sbjct: 112 GHGPLG-GD---QVLNEKPAAVNPLRKRAVRDVLDVGVRAINGALTLGKGQRVGLMAGSG 167 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPIL 230 +GKS LL M R+ D V++ L+GERGREVREF+E LGD L K+V+VVA +DESP++ Sbjct: 168 VGKSVLLGMMTRATAADVVVVGLIGERGREVREFVEHALGDEGLAKAVLVVAPADESPLM 227 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R A IA ++ G +VLL++DS+TR+A + REIA + GE P RGYP SVF L Sbjct: 228 RLRAAELCHAIAAHYRDAGSDVLLLVDSLTRYAMAQREIALSLGEPPATRGYPPSVFGML 287 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 P+L+E G E G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL+R LAE G YP Sbjct: 288 PQLVETAGNGEG-SGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLSRELAERGHYPA 346 Query: 351 VDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 +D SVSR A AD + +V + L +I R E+ RD+ +GGY G D D+AV Sbjct: 347 IDVTRSVSRC--MAQIADARHVVRAGQLKEMIGRHEQVRDLIPLGGYVQGADAATDRAVA 404 Query: 409 QVPIIYDFLKQSPSDLSSED 428 I FL+Q + +S D Sbjct: 405 MAERIGAFLRQPMHEAASFD 424 >gi|118442915|ref|YP_877978.1| flagellum-specific ATP synthase [Clostridium novyi NT] gi|118133371|gb|ABK60415.1| flagellum-specific ATP synthase [Clostridium novyi NT] Length = 438 Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 172/434 (39%), Positives = 250/434 (57%), Gaps = 19/434 (4%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 +A+ Y++ LV Q + +T + VC ++ +N + +V+ Sbjct: 14 IAKCDFKYTEGLVKQ---VIGLTIEVEGIKAFVGEVC----TIYNKENEPIMCEVVGFKE 66 Query: 68 DIVYICPVGIGEEISLG---DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124 D V + P +GE I +G +V + S G+V+N LGKP+ ++ L G + Sbjct: 67 DNVILMP--LGELIGIGPGCKVVPSKKYLSVKCSDDLLGKVLNGLGKPLKSEEELPIG-V 123 Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 + + P + R+R++ TG+R +D F GQRIG+FAGSG+GKST L M AR Sbjct: 124 DYPLDTAPPDPLKRRRIKDEIATGVRAVDGFLTCGEGQRIGIFAGSGVGKSTTLGMIARE 183 Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D +I+L+GERGREV +FIE LG+ LKKSV+V ATSD+ ++R TA IAE Sbjct: 184 AKADINVIALIGERGREVLDFIEKDLGEEGLKKSVIVCATSDQPALVRLKGAFTATAIAE 243 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 YF KG V+L++DS+TRFA + RE+ GE P +GY SVF+ LPRL+ER G S+K Sbjct: 244 YFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVFAMLPRLMERSGMSDK- 302 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA + YP +D L SVSRL + Sbjct: 303 -GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAGKNHYPAIDILNSVSRLMSE 361 Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 + + KK S L+ ++ + D+ IG Y G + +D A+ + D+L+Q + Sbjct: 362 IATDEHKKAASLARDLLATYKNSEDLINIGAYVRGSNPKVDMAIQYNDELNDYLRQGIKE 421 Query: 424 LSSEDVFQEITKKL 437 S FQE +L Sbjct: 422 HSE---FQESVTRL 432 >gi|255261477|ref|ZP_05340819.1| flagellum-specific ATP synthase [Thalassiobium sp. R2A62] gi|255103812|gb|EET46486.1| flagellum-specific ATP synthase [Thalassiobium sp. R2A62] Length = 461 Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 161/405 (39%), Positives = 237/405 (58%), Gaps = 2/405 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G++S I +T LSQ+ GD + S +V++I + GI + I + Sbjct: 23 GHVSEIFQDKIRITGLSQFARTGDILTVGLGESALRAEVVQIGKKDLVAMVDGITDRIQM 82 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 D V + G R+ PS W GR+I+ G P+DG L G + + + P A R+ + Sbjct: 83 NDSVAYDGVVRLHPSDHWKGRIIDPFGAPMDGK-HLMCGVNPINVRAAPPDASKRRPLGP 141 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 +TG+ + F P+ GQR+G+FAGSG+GKSTLL M + D ++I LVGERGRE+ Sbjct: 142 RLETGLAAFNTFLPIVTGQRVGLFAGSGVGKSTLLGMMCQGIQADTIVIGLVGERGRELM 201 Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 EF+ + LG + L +SVVV ATSD++P R+ TA+ +AEYF +G NVLL+LDS+TRF Sbjct: 202 EFVTNVLGQEGLARSVVVAATSDQAPQTRRRCAWTAMAVAEYFRDQGQNVLLLLDSVTRF 261 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A + RE+A GE RG+P S + L ER GP + KG+ITAV SVLV G + + Sbjct: 262 AEAHREVAVAGGEDASLRGFPASTNHMITALCERAGPGPEGKGDITAVFSVLVAGSDMEE 321 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 PIAD +R +LDGHIVL+R +AE GR+P +D SVSR +A +A++ KL+ + L+ Sbjct: 322 PIADMMRGVLDGHIVLDREIAERGRFPAIDLQRSVSRALPEAATAEQNKLLLAARKLLAT 381 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 + + + G Y G D +D ++ P I +FL S D++++ Sbjct: 382 YTRSEMMIQAGLYVSGSDPDIDASILAYPEIDNFLTLSGQDITAD 426 >gi|86149592|ref|ZP_01067822.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597163|ref|ZP_01100398.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni 84-25] gi|148926360|ref|ZP_01810044.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni CG8486] gi|218561874|ref|YP_002343653.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839860|gb|EAQ57119.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190224|gb|EAQ94198.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni 84-25] gi|112359580|emb|CAL34364.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145844752|gb|EDK21857.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni CG8486] gi|284925487|gb|ADC27839.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni IA3902] gi|315928127|gb|EFV07445.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 461 Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 165/425 (38%), Positives = 240/425 (56%), Gaps = 12/425 (2%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59 NLE L ++L ++ NL G I+ I++ + L V GD V ++ +N + L Sbjct: 2 NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 V+ I Y+ P E +GD F +I S GRV++ +P DG + Sbjct: 57 AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + + M IM AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 117 I-EATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M ++ +++L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S S Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S + K L +E + IG Y+ G D LD+A+ + + FL Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414 Query: 419 QSPSD 423 Q+P + Sbjct: 415 QNPEE 419 >gi|94500272|ref|ZP_01306805.1| flagellum-specific ATP synthase [Oceanobacter sp. RED65] gi|94427571|gb|EAT12548.1| flagellum-specific ATP synthase [Oceanobacter sp. RED65] Length = 469 Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 168/425 (39%), Positives = 237/425 (55%), Gaps = 18/425 (4%) Query: 4 NLETLAQLAE--DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLG 60 L+TL +AE + VV G + V C V +GD V QG Sbjct: 10 KLKTLKWIAERHQFKSQPVVSGRLTRMVGLTLEAVGC---NVKVGDRCHVEQGSEFIE-A 65 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSL 119 QV+ + D ++ PV +S G V I GRVIN GKP+DG Sbjct: 66 QVVGFDEDKFFLMPVEPANSLSPGAKVTPILDSAEIPVGDMLLGRVINGAGKPLDG---- 121 Query: 120 GKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 KGDL ++ + + M R + + GIR I+ + GQR+G+FAGSG+GKS Sbjct: 122 -KGDLVSQNTLNLDGSIINPMQRAPIRQTMDVGIRAINGLLTVGRGQRMGLFAGSGVGKS 180 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMA 234 LL M R D +++ LVGERGREV+EFI+D LG+ +K++VVV + +D+SP++R A Sbjct: 181 VLLGMMTRFSTADIIVVGLVGERGREVQEFIQDILGEEGMKRAVVVASPADDSPVMRMRA 240 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 + IAEYF +G +VLL++DS+TR+ + REIA GE P +GYP SVF+++P+L+ Sbjct: 241 ADLSTAIAEYFRDEGKDVLLLMDSLTRYGQAQREIALAVGEPPATKGYPPSVFAKIPKLV 300 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + G+ITA +VL +GD+ DPIADS R+ILDGH+VL R LAEEG+YP +D Sbjct: 301 ERAGNGPEGGGSITAFYTVLTEGDDLQDPIADSARAILDGHVVLARRLAEEGQYPAIDIE 360 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 AS+SR + S + HL + + D+ +G Y PG + LD AV PI+ Sbjct: 361 ASISRAMPQIVSKASLQNAQKFKHLYSLYRQNMDLISVGAYSPGNNPELDHAVRLHPIMR 420 Query: 415 DFLKQ 419 F+ Q Sbjct: 421 TFIMQ 425 >gi|261855057|ref|YP_003262340.1| flagellar protein export ATPase FliI [Halothiobacillus neapolitanus c2] gi|261835526|gb|ACX95293.1| flagellar protein export ATPase FliI [Halothiobacillus neapolitanus c2] Length = 465 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 143/355 (40%), Positives = 220/355 (61%), Gaps = 7/355 (1%) Query: 70 VYICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 Y+ P+ I+ G V + G R + P GRV++A G+P+D ++ GD+ + Sbjct: 92 TYLMPLEALRGIAPGCRVQNQGASIRMPLGPE--LLGRVLDARGQPLDDGPAI-FGDIPV 148 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 ++ + + R+ + + G+R I+ + GQR+G+FAGSG+GKS LL M R Sbjct: 149 DLQGRSNNPLKRRPIREPLDVGVRAINALLTVGRGQRMGIFAGSGVGKSVLLGMMTRYTT 208 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 + +++ L+GERGREVREF+ + L D + +++V+ A +D SP++R A IAEYF Sbjct: 209 AEIIVVGLIGERGREVREFVAEILDDEARSRAIVIAAPADASPLMRLHGASLATAIAEYF 268 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VLL++DS+TR+A + REI GE P +GYP SVF+ LP L+ER G E +G Sbjct: 269 REQGHDVLLLMDSLTRYAQAQREIGLAIGEPPATKGYPPSVFARLPALVERAGNGESARG 328 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 ++TA +VLV+GD+ NDPIAD+ R+ILDGHIVL+R++AE GRYP +D AS+SRL Sbjct: 329 SMTAFYTVLVEGDDQNDPIADAARAILDGHIVLSRAIAERGRYPAIDIEASISRLMPALV 388 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 S + L+ L+ + ++RD+ +G YR G D+ LD+A+ P + F+ QS Sbjct: 389 SPEHLDLMQRFKQLMSTYNQSRDLLAVGAYRRGHDVRLDRAIDAQPDLEAFISQS 443 >gi|332305662|ref|YP_004433513.1| flagellar protein export ATPase FliI [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172991|gb|AEE22245.1| flagellar protein export ATPase FliI [Glaciecola agarilytica 4H-3-7+YE-5] Length = 444 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 166/423 (39%), Positives = 243/423 (57%), Gaps = 17/423 (4%) Query: 5 LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64 LE + L + + VV G + + + T+ + + +G + Q + + +V+ Sbjct: 6 LENIKALQQQVPQAPVVAAGKL--VRGIGLTLEAVGCQMPVGSQCLIQTVDGEIEAEVVG 63 Query: 65 INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123 I Y+ P + I G V R + P GRV++ G+P+DG LG Sbjct: 64 FAEHITYLMPTQAVKGIVPGSRVQPLNREQGLPVGMSLLGRVVDGNGQPLDG---LG--- 117 Query: 124 LSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 +++ +VP P MN R+ + + G+R I+ + GQR+G+FAGSG+GKS L Sbjct: 118 -AIKAEKRVPLTRPPMNPLSRKPIREPLDVGVRAINSMITVGSGQRMGLFAGSGVGKSVL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M R D V++ LVGERGREV+EFI+D LGD +K+VVV A +D SP++R Sbjct: 177 LGMMTRGTSADVVVVGLVGERGREVKEFIQDILGDEERQKAVVVAAPADTSPLMRLKGCE 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TAVTIAEYF KG NVLL++DS+TR+A + REIA GE P +GYP SVF+ LP L+ER Sbjct: 237 TAVTIAEYFRDKGMNVLLLVDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVER 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + +G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R LA+ G YP +D AS Sbjct: 297 AGNGGENQGSITAFYTVLTEGDDLQDPIADSARAILDGHIVLSRQLADSGHYPAIDIEAS 356 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S + ++ + + +++ RD+ IG Y G D +D ++ P I F Sbjct: 357 ISRVMPMVVSPEHVQVARRIRQVYSTYQQNRDLISIGAYTRGNDPRIDLSIKAEPAINAF 416 Query: 417 LKQ 419 L+Q Sbjct: 417 LQQ 419 >gi|308173586|ref|YP_003920291.1| flagellar-specific ATPase [Bacillus amyloliquefaciens DSM 7] gi|307606450|emb|CBI42821.1| flagellar-specific ATPase [Bacillus amyloliquefaciens DSM 7] gi|328553482|gb|AEB23974.1| flagellum-specific ATP synthase [Bacillus amyloliquefaciens TA208] gi|328911727|gb|AEB63323.1| flagellar-specific ATPase [Bacillus amyloliquefaciens LL3] Length = 438 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 159/361 (44%), Positives = 221/361 (61%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + + P I+ G +V G RI A G+V++A G+P+DG +L Sbjct: 58 EVVGFQDENILLMPYLEAASIAPGSIVEATGESLRIKVGAGLIGQVVDAFGEPLDGR-AL 116 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 KG + P M R + + G+R ID + GQRIG+FAGSG+GKSTL+ Sbjct: 117 PKGLSPVSTEQPPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238 M A+ D II+LVGERGREVREFIE LG+ LK+S+VVVATSD+ ++R A TA Sbjct: 177 MIAKQTEADLNIIALVGERGREVREFIEKDLGEEGLKRSIVVVATSDQPALMRLKAAYTA 236 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF KG NV+ ++DS+TR A + REI +GE P +GY SVF+ LPRLLER G Sbjct: 237 TAIAEYFRDKGRNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 296 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 +E+ G ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S Sbjct: 297 ANEQ--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSIS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ K + L+ ++ + D+ IG Y+ G +D+A+ P + FLK Sbjct: 355 RVMSNISDPAHIKAANKFRDLLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 414 Query: 419 Q 419 Q Sbjct: 415 Q 415 >gi|580859|emb|CAA39523.1| unnamed protein product [Bacillus subtilis subsp. subtilis str. 168] Length = 440 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 153/361 (42%), Positives = 217/361 (60%), Gaps = 6/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + + P I+ G +V G R+ G+VI+A G+P+D +S Sbjct: 61 EVVGFQEENILLMPYLEAASIAPGSIVEATGESLRVKVGTGLIGQVIDAFGEPLD--ESF 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + P M R + + G+R ID + GQRIG+FAGSG+GKSTL+ Sbjct: 119 CRKVSPVSTEQSPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 178 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M A+ D +I+LVGERGREVREFIE LG + LK+S+VVVATSD+ ++R A TA Sbjct: 179 MIAKQTEADLNVIALVGERGREVREFIEKDLGKEGLKRSIVVVATSDQPALMRLKAAYTA 238 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF KG NV+ ++DS+TR A + REI +GE P +GY SVF+ LPRLLER G Sbjct: 239 TAIAEYFRDKGQNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 298 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 +E G ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S Sbjct: 299 ANEH--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNVLKSIS 356 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + L+ ++ + D+ IG Y+ G +D+A+ P + FLK Sbjct: 357 RVMSNISTKQHLDAANKFRELLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 416 Query: 419 Q 419 Q Sbjct: 417 Q 417 >gi|223040079|ref|ZP_03610360.1| flagellar protein export ATPase FliI [Campylobacter rectus RM3267] gi|222878665|gb|EEF13765.1| flagellar protein export ATPase FliI [Campylobacter rectus RM3267] Length = 434 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 166/434 (38%), Positives = 249/434 (57%), Gaps = 10/434 (2%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLG 60 NL++L ++L + S + V G I I++ ++ L +GD V + K+ L Sbjct: 2 NLDSLKSKLGANLSLSSVF--GVIERISATTIEISGLRP--SIGDIVQICAKDKSKSGLA 57 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 V + + I P G E +GD V+ + +I GRV++ P DG ++ Sbjct: 58 MVTEVRQNTALISPFGFVEGYKIGDFVYQSDQGMKIPVGDALLGRVVDPFMNPKDGKGAI 117 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + IM AM R +++ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 118 VATEYA-PIMRAPIDAMKRGLIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMG 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239 M ++ +++L+GERGREV EFIE L +L +VV+VATSD+SP++RK A+ Sbjct: 177 MIVKNSQAPIKVVALIGERGREVPEFIEKNLRGDLSGTVVIVATSDDSPLMRKYGAFCAM 236 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 ++AEYF ++G +VL I+DS+TRFA + REI GE P ++GYP SV + LP+L+ER G Sbjct: 237 SVAEYFKNQGKDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG- 295 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 E+ KG+ITA +VLVDGD+ +DPIAD RSILDGHIVL+R + + G YPP++ L S SR Sbjct: 296 KEEGKGSITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSREMTDFGIYPPINILNSASR 355 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + S + + + L L +E + IG Y+ G D LD A+ + I FLKQ Sbjct: 356 VMSDIASKEHRANAAKLKRLYSLLKENEVLLRIGAYQKGSDKELDLAISKKEFINAFLKQ 415 Query: 420 SPSDLSSEDVFQEI 433 + S + QE+ Sbjct: 416 DAEEGFSFEQTQEL 429 >gi|253988533|ref|YP_003039889.1| type III secretion system ATPase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|211637885|emb|CAR66514.1| type iii secretion component protein sctn [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253779983|emb|CAQ83144.1| type iii secretion component protein sctn [Photorhabdus asymbiotica] Length = 441 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 162/407 (39%), Positives = 237/407 (58%), Gaps = 27/407 (6%) Query: 35 TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94 T++ L++ + F HQ + LG++ I+ + + P G ++ +GD + Sbjct: 57 TLSLLAEVI---GFQQHQALLTP-LGEMFGISSN-TEVSPTGAMHQVGVGDYLL------ 105 Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 G++++ LG P G L + + P M+R+R+E G+R ID Sbjct: 106 --------GQILDGLGNPFSGGQ-LPEPQAWYPVYRDAPAPMSRKRIEHPLSLGVRAIDG 156 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 GQR+G+FA +G GKSTLLS R+ D +++L+GERGREVREFIE LG+ Sbjct: 157 LLTCGEGQRMGIFAAAGGGKSTLLSTLIRNAEVDVTVLALIGERGREVREFIESDLGEEG 216 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 LK+SV+VVATSD + R A A +IAEYF +G VLL++DS+TRFA + REI + Sbjct: 217 LKRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAA 276 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P RGYP SVF+ LPRL+ER G S +KG+ITA+ +VLV+GD+ +P+AD RSILD Sbjct: 277 GEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGDDMTEPVADETRSILD 334 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHI+L+R LA YP +D L S SR+ + + + + + L H + ++EE + IG Sbjct: 335 GHIILSRKLAAANHYPAIDVLRSASRVMSQIITPEHQAQANLLRHWLAKYEEVELLLQIG 394 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDLSSEDV-FQEITKK 436 Y+ G D + D A+ + I +L+Q PSDL V Q+ITK+ Sbjct: 395 EYQKGQDPVADNAIAHIEAIRGWLRQGTHEPSDLPQTLVLLQQITKQ 441 >gi|32266064|ref|NP_860096.1| flagellum-specific ATP synthase [Helicobacter hepaticus ATCC 51449] gi|32262113|gb|AAP77162.1| flagellum-specific ATP synthase FliI [Helicobacter hepaticus ATCC 51449] Length = 458 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 160/381 (41%), Positives = 229/381 (60%), Gaps = 6/381 (1%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPI 113 + NLG V+ I + +I P E GD V + G I GRVIN LG+PI Sbjct: 74 THNLGMVMAIEGEHFFISPFSFIEGHKCGDKVEILNHG-LHIPVGENMLGRVINPLGEPI 132 Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 D +L ++ +M A+ R + + F+ G++ ID GQ++G+FAGSG+G Sbjct: 133 DDKGALHTSHTTL-LMRPPISALKRGLINEVFEVGVKSIDGILTCGKGQKMGIFAGSGVG 191 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKM 233 KSTL+ M R +I+L+GERGREV EFI L ++L +++VVATSD+SP++RK Sbjct: 192 KSTLMGMIVRGSNAPIKVIALIGERGREVPEFIHKNLNNDLTNTILVVATSDDSPLMRKY 251 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 +A+ IAEYF S G++VL I+DSITRFA + REI GE P ++GYP SV + LP+L Sbjct: 252 GAFSAMAIAEYFKSLGNDVLFIMDSITRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQL 311 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 +ER G E G+ITA +VLV+GD+ +DP+AD RSILDGHIVLNR L + G YPP++ Sbjct: 312 MERAG-KEDGVGSITAFFTVLVEGDDLSDPVADQSRSILDGHIVLNRDLTDMGIYPPINI 370 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 L S SR+ + S + +++ L +E + IG Y+ G D LD+A+ + ++ Sbjct: 371 LNSASRVINDIISPEHLQVIRKFRRLYSLLKENEVLIRIGAYQRGADKELDEAITKRSLM 430 Query: 414 YDFLKQSPSD-LSSEDVFQEI 433 FLKQ ++ S E FQE+ Sbjct: 431 ESFLKQEMNEQWSFERSFQEL 451 >gi|167574676|ref|ZP_02367550.1| flagellum-specific ATP synthase [Burkholderia oklahomensis C6786] Length = 435 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 167/380 (43%), Positives = 232/380 (61%), Gaps = 24/380 (6%) Query: 61 QVIRINLDIVYICP----VGI--GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID 114 QV+ N + Y+ P VG+ G ++ D G R+ + W GRVIN LG+PID Sbjct: 57 QVVGFNREESYLMPFKKPVGLVAGAQVLARD---RKGALRVGRA--WLGRVINGLGEPID 111 Query: 115 GDDSLGKGDLSMEIMSKVPPAMN--RQR-VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 G LG GD +++++ P A+N R+R V G+R I+ L GQR+G+ AGSG Sbjct: 112 GHGPLG-GD---QVLNEKPAAVNPLRKRAVRDVLDVGVRAINGALTLGKGQRVGLMAGSG 167 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPIL 230 +GKS LL M R+ D V++ L+GERGREVREF+E LGD L K+V+VVA +DESP++ Sbjct: 168 VGKSVLLGMMTRATAADVVVVGLIGERGREVREFVEHALGDEGLAKAVLVVAPADESPLM 227 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R A IA ++ G +VLL++DS+TR+A + REIA + GE P RGYP SVF L Sbjct: 228 RLRAAELCHAIAAHYRDAGSDVLLLVDSLTRYAMAQREIALSLGEPPATRGYPPSVFGML 287 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 P+L+E G E G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL+R LAE G YP Sbjct: 288 PQLVETAGNGEG-SGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLSRELAERGHYPA 346 Query: 351 VDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 +D SVSR A AD + +V + L +I R E+ RD+ +GGY G D D+AV Sbjct: 347 IDVTRSVSRC--MAQIADARHVVRAGQLKEMIGRHEQVRDLIPLGGYVQGADAATDRAVA 404 Query: 409 QVPIIYDFLKQSPSDLSSED 428 I FL+Q + +S D Sbjct: 405 MAERIDAFLRQPMHEAASFD 424 >gi|291538498|emb|CBL11609.1| type III secretion system ATPase, FliI/YscN [Roseburia intestinalis XB6B4] Length = 435 Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 152/374 (40%), Positives = 236/374 (63%), Gaps = 6/374 (1%) Query: 48 FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106 ++ + +N + +V+ + + P E I +G +V + G + G + Sbjct: 45 IIIDREQNISTMAEVVGFRDKHLLLMPFESVEGIGVGCIVENTGHPLTVKVGEELLGHTL 104 Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 + +G+P D ++ L D +E + P M R+ +++ G++ +D + GQRIG+ Sbjct: 105 DGIGRPTDVEELLLPYDYPVEALP--PDPMARKIIDEVLPLGVKAVDGLITVGKGQRIGI 162 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 FAGSG+GKSTLL MFAR+ D +I+L+GERGREVREF+E LG+ +K+SVV+VATSD Sbjct: 163 FAGSGVGKSTLLGMFARNTKADINVIALIGERGREVREFVERDLGEEGMKRSVVIVATSD 222 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 + ++R A TA IAEYF +G +VLL++DS+TRF+ + REI SGE PV RGYP S Sbjct: 223 KPALIRNKAAKTATAIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPS 282 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 V+SE+P+LLER G S +KG+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+R L ++ Sbjct: 283 VYSEMPKLLERAGTS--DKGSITGLYTVLVDGDDMNEPITDTARSILDGHIMLSRKLGQK 340 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 YP +D L S+SR+ +++ K+L L +++ + E D+ IG Y+ G + +D Sbjct: 341 NHYPAIDVLQSISRVMSSIATSEHKELAGKLRNVMATYNEAEDLINIGAYKNGTNREIDY 400 Query: 406 AVHQVPIIYDFLKQ 419 A+ ++ + +FL Q Sbjct: 401 AIQKIQAVNEFLMQ 414 >gi|257457883|ref|ZP_05623042.1| flagellar protein export ATPase FliI [Treponema vincentii ATCC 35580] gi|257444596|gb|EEV19680.1| flagellar protein export ATPase FliI [Treponema vincentii ATCC 35580] Length = 479 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 150/326 (46%), Positives = 207/326 (63%), Gaps = 4/326 (1%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 + GRV+++LG+ DG L I+++ P + R+ +++ TGIR ID + Sbjct: 98 SVLLGRVVDSLGRAADGKQE-PYSPLHYPILAQPPDPLERRPIKERIVTGIRAIDALLAV 156 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217 GQRIG+FAGSGIGKSTL+ M AR+ D +I+L+GERGREV +F+E LG + LK S Sbjct: 157 GRGQRIGIFAGSGIGKSTLMGMIARNTSADVNVIALIGERGREVNDFLEHDLGPEGLKHS 216 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VVV ATSD SP+ R TA IAEYF +G +V+L+ DS+TRFA + REI+ GE P Sbjct: 217 VVVTATSDTSPLARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAKAQREISLAIGEPP 276 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 RGY SVF LP+LLER G S K G+IT +VLVDGD+ ++PI+D+VR ILDGHIV Sbjct: 277 ATRGYTPSVFEVLPKLLERSGTSAK--GSITGFYTVLVDGDDMDEPISDAVRGILDGHIV 334 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 LNR LA+ G YP +D L S+SRLA++ KK + L+ + + D+ +G Y+ Sbjct: 335 LNRKLAQCGHYPAIDVLGSISRLANRVAGECSKKAAQYMRKLMAVYADAEDMIQVGAYQK 394 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSD 423 G + +D+A+ I FL+Q +D Sbjct: 395 GSNPAIDEAIDHHDKIETFLQQEVND 420 >gi|27550061|gb|AAO18044.1| LscN [Photorhabdus luminescens] Length = 440 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 162/406 (39%), Positives = 239/406 (58%), Gaps = 27/406 (6%) Query: 35 TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94 T++ L++ + F HQ + LG++ I+ + + P G ++ +GD + Sbjct: 57 TLSLLAEVI---GFQQHQALLTP-LGEMFGISSN-TEVSPTGAMHQVGVGDYLL------ 105 Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 G+V++ LG P G L + + P M+R+R+E G+R ID Sbjct: 106 --------GQVLDGLGNPFAGGQ-LPEPQAWYPVYRDAPAPMSRKRIEHPLSLGVRAIDG 156 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 GQR+G+FA +G GKSTLLS RS D +++L+GERGREVREFIE LG+ Sbjct: 157 LLTCGEGQRMGIFAAAGGGKSTLLSTLIRSAEVDVTVLALIGERGREVREFIESDLGEEG 216 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 LK+SV+VVATSD + R A A +IAEYF +G VLL++DS+TRFA + REI + Sbjct: 217 LKRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAA 276 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P RGYP SVF+ LPRL+ER G S +KG+ITA+ +VLV+GD+ +P+AD RSILD Sbjct: 277 GEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGDDMTEPVADETRSILD 334 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHI+L+R LA YP +D L S SR+ ++ + + + L + + ++EE + IG Sbjct: 335 GHIILSRKLAAANHYPAIDVLRSASRVMNQIITPEHQAQAGLLRNWLAKYEEVELLLQIG 394 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL-SSEDVFQEITK 435 Y+ G DL+ D A+ ++ I +L+Q PSDL + + Q+IT+ Sbjct: 395 EYQKGQDLVADNAIARIDAIRSWLRQGTHEPSDLPQTLALLQQITR 440 >gi|15615018|ref|NP_243321.1| flagellum-specific ATP synthase [Bacillus halodurans C-125] gi|10175075|dbj|BAB06174.1| flagellar-specific ATP synthase [Bacillus halodurans C-125] Length = 437 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 151/380 (39%), Positives = 239/380 (62%), Gaps = 6/380 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 + +V+ + V + P+ EI+ G LV GR ++ G VI+ G+P+ G+ Sbjct: 55 MAEVVGFKEERVLLMPLNGTAEIAPGSLVEGTGRPLQVKVGYSLIGHVIDGCGRPLTGE- 113 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 +L G + P ++R R+++ G+R ID + GQR+G+FAGSG+GKSTL Sbjct: 114 ALPNGLTPYPTDNPPPNPISRPRIKEAMHLGVRAIDGLLTVGKGQRVGIFAGSGVGKSTL 173 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 L+M A++ D II+L+GERGREV++FIE LG D L++S++VVATSD+ ++R + Sbjct: 174 LAMLAKNAAADLNIIALIGERGREVKDFIERDLGEDGLRRSIIVVATSDQPALMRIKGAM 233 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA +AEYF +G +V L++DS+TRFA + REI GE P +GY SVF+ LP+LLER Sbjct: 234 TATALAEYFRDQGLHVNLMMDSVTRFAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLER 293 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + K G+IT +VLVDGD+ N+PI+D+VR ILDGH VL+R LA +G YP ++ L S Sbjct: 294 AGTNGK--GSITGFYTVLVDGDDLNEPISDTVRGILDGHFVLDRELANKGHYPAINILKS 351 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + + ++K+ + L+ ++E+ D+ IG Y+ G +D+A+ + P + F Sbjct: 352 VSRVMNDIVTDEQKRAAEHVRSLLSVYKESEDLINIGAYKRGSSKQIDEAIERQPEVISF 411 Query: 417 LKQSPSDLS-SEDVFQEITK 435 L+Q+ +++ +E Q++ + Sbjct: 412 LRQNTDEVAIAEHSIQQLIQ 431 >gi|154686040|ref|YP_001421201.1| flagellum-specific ATP synthase [Bacillus amyloliquefaciens FZB42] gi|154351891|gb|ABS73970.1| FliI [Bacillus amyloliquefaciens FZB42] Length = 438 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 158/361 (43%), Positives = 221/361 (61%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + + P I+ G +V G RI A G+V++A G+P+DG +L Sbjct: 58 EVVGFQDENILLMPYLEAASIAPGSIVEATGESLRIKVGAGLIGQVVDAFGEPLDGR-AL 116 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 KG + P M R + + G+R ID + GQRIG+FAGSG+GKSTL+ Sbjct: 117 PKGLSPVSTEQPPPNPMKRPPIREKMGVGVRSIDSLLTVGKGQRIGIFAGSGVGKSTLMG 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238 M A+ D II+LVGERGREVREFIE LG+ LK+S+VVVATSD+ ++R A TA Sbjct: 177 MIAKQTEADLNIIALVGERGREVREFIEKDLGEEGLKRSIVVVATSDQPALMRLKAAYTA 236 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF KG NV+ ++DS+TR A + REI +GE P +GY SVF+ LPRLLER G Sbjct: 237 TAIAEYFRDKGRNVMFMMDSVTRVAMAQREIGLAAGEPPTTKGYTPSVFAILPRLLERTG 296 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 +E+ G ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G++P V+ L S+S Sbjct: 297 ANEQ--GTITAFYTVLVDGDDMNEPIADTVRGILDGHIVLDRALANKGQFPAVNILKSIS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + L+ ++ + D+ IG Y+ G +D+A+ P + FLK Sbjct: 355 RVMSNISDTSHIEAANKFRDLLSTYQNSEDLINIGAYKRGSSREIDEAIQFYPQLIQFLK 414 Query: 419 Q 419 Q Sbjct: 415 Q 415 >gi|224438105|ref|ZP_03659040.1| flagellum-specific ATP synthase [Helicobacter cinaedi CCUG 18818] gi|313144545|ref|ZP_07806738.1| flagellum-specific ATP synthase FliI [Helicobacter cinaedi CCUG 18818] gi|313129576|gb|EFR47193.1| flagellum-specific ATP synthase FliI [Helicobacter cinaedi CCUG 18818] Length = 472 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 158/370 (42%), Positives = 222/370 (60%), Gaps = 5/370 (1%) Query: 52 QGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINAL 109 QG+ +LG VI I + +I P E GD V + G I GRV+N L Sbjct: 85 QGEKKQSLGMVIAIEGEKFFISPFSFVEGHKCGDKVEILNHG-LNIPVGEAMLGRVVNPL 143 Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 G+PID SL + +M A+ R +++ F+ G++ ID GQ++G+FAG Sbjct: 144 GEPIDDKGSL-HTQATTPLMRSPLSALKRGLIDEVFEVGVKSIDSILTCGKGQKMGIFAG 202 Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPI 229 SG+GKSTL+ M R +I+L+GERGREV EFI L ++L +++VVATSD+SP+ Sbjct: 203 SGVGKSTLMGMIVRGAKAPIKVIALIGERGREVPEFIYKNLNNDLTNTILVVATSDDSPL 262 Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 +RK +A+ IAEYF S G++VL I+DS+TRFA + REI GE P ++GYP SV + Sbjct: 263 MRKYGAFSAMAIAEYFKSLGNDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTL 322 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 LP+L+ER G E G+ITA +VLV+GD+ +DPIAD RSILDGHIVLNR L + G YP Sbjct: 323 LPQLMERAG-KEDSVGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLNRDLTDMGIYP 381 Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409 P++ L S SR+ + S + V L +E + IG Y+ G D+ LD+A+++ Sbjct: 382 PINILNSASRIINDIISPEHLGYVRKFRRLYSLIKENEVLIRIGAYQRGADIELDEAINK 441 Query: 410 VPIIYDFLKQ 419 + FLKQ Sbjct: 442 RTAMEAFLKQ 451 >gi|269792943|ref|YP_003317847.1| ATPase, FliI/YscN family [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100578|gb|ACZ19565.1| ATPase, FliI/YscN family [Thermanaerovibrio acidaminovorans DSM 6589] Length = 441 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 165/399 (41%), Positives = 239/399 (59%), Gaps = 10/399 (2%) Query: 43 VCLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSA 99 V +GD +N N +V+ D V + P+G +I G D+ + Sbjct: 41 VQVGDLCEISFRNRRNPLKAEVVGFRSDRVLLMPLGDLNDIGPGCDVAALGPTLGVHVGE 100 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G + + + P + RQ +++ G+RVID L Sbjct: 101 DLLGRILDGLGNPIDDLGPVGASEF-YPLYAPPPHPLKRQMIDRPLSVGVRVIDGLLTLG 159 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR+ D +I+LVGERGREVREF+E LG + LK+SV Sbjct: 160 QGQRVGIFAGSGVGKSVLLGMMARNTEADVNVIALVGERGREVREFVERDLGPEGLKRSV 219 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VVVATSD+ P++R A LTA +AEYF +G NVLL++DS+TR A + R++ GE P Sbjct: 220 VVVATSDQPPLVRLKASLTATAVAEYFRDQGANVLLMMDSVTRVAMAQRDVGLAIGEPPA 279 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GY SVF+ LPRLLER G ++G+ITA+ +VLV+GD+ N+P+AD+VR ILDGHIVL Sbjct: 280 TKGYTPSVFAFLPRLLERSGAG--DRGSITAIYTVLVEGDDMNEPVADTVRGILDGHIVL 337 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +RSLA + YP V+ SVSR+ S + + + L+ +EE +D+ IG Y+ G Sbjct: 338 SRSLAAKNHYPSVEVGRSVSRVMPHIVSREHLESAGRVRELLAVYEEAQDLVNIGAYKAG 397 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 + +D A+ + + +FL+Q + SS F E +L Sbjct: 398 SNPRIDWALANLEDVRNFLRQGMHERSS---FDETVSRL 433 >gi|302392393|ref|YP_003828213.1| type III secretion system ATPase, FliI/YscN [Acetohalobium arabaticum DSM 5501] gi|302204470|gb|ADL13148.1| type III secretion system ATPase, FliI/YscN [Acetohalobium arabaticum DSM 5501] Length = 439 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 152/333 (45%), Positives = 209/333 (62%), Gaps = 5/333 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V++ LG P+ D L + + + P + RQR+ + GIR ID GQ Sbjct: 105 GHVLDGLGNPLT-DLDLDQLHKEYSVNNPPPNPLVRQRITEPLSVGIRSIDGLLTCGRGQ 163 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKSTLL M AR+ D +I L+GERGREVREFIED LG + LK+SVVVV Sbjct: 164 RLGIFAGSGVGKSTLLGMIARNTAADVNVIGLIGERGREVREFIEDDLGTEGLKRSVVVV 223 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+ ++R L TIAEYF +G +V+L++DSITRFA + RE+ GE P RG Sbjct: 224 ATSDQPALVRLKGALVTTTIAEYFRDQGQDVMLMMDSITRFARAQREVGLAVGEPPATRG 283 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF+ LP+LLER G E G IT + +VLV+GD+ N+PIAD+VR I+DGHI L+R Sbjct: 284 YTPSVFAMLPKLLERAG--NNEVGTITGLYNVLVEGDDMNEPIADAVRGIVDGHITLSRD 341 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA + YP VD L SVSR+ D + + + L ++ +EE++D+ IG Y G + Sbjct: 342 LATQNHYPAVDVLESVSRVMDDVVTEEHQTAAQQLREVLATYEESKDLVNIGAYEEGNNP 401 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 LD A+ ++ + DFL+Q + S E Q++ Sbjct: 402 ELDYALSKLDEVNDFLQQGVEEKSDFETTLQQL 434 >gi|301646800|ref|ZP_07246653.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1] gi|307136847|ref|ZP_07496203.1| FliI/YscN family ATPase [Escherichia coli H736] gi|307315208|ref|ZP_07594787.1| flagellar protein export ATPase FliI [Escherichia coli W] gi|331640702|ref|ZP_08341849.1| flagellar protein export ATPase FliI [Escherichia coli H736] gi|331666535|ref|ZP_08367409.1| flagellar protein export ATPase FliI [Escherichia coli TA271] gi|301075006|gb|EFK89812.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1] gi|306905389|gb|EFN35926.1| flagellar protein export ATPase FliI [Escherichia coli W] gi|315059477|gb|ADT73804.1| flagellum-specific ATP synthase [Escherichia coli W] gi|315616838|gb|EFU97455.1| flagellum-specific ATP synthase [Escherichia coli 3431] gi|323379965|gb|ADX52233.1| ATPase, FliI/YscN family [Escherichia coli KO11] gi|331040076|gb|EGI12284.1| flagellar protein export ATPase FliI [Escherichia coli H736] gi|331065759|gb|EGI37643.1| flagellar protein export ATPase FliI [Escherichia coli TA271] Length = 445 Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 153/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S + ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMREPASLELVQ 430 >gi|320535384|ref|ZP_08035498.1| flagellar protein export ATPase FliI [Treponema phagedenis F0421] gi|320147786|gb|EFW39288.1| flagellar protein export ATPase FliI [Treponema phagedenis F0421] Length = 478 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 162/384 (42%), Positives = 227/384 (59%), Gaps = 7/384 (1%) Query: 44 CLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-C 100 +G+ + NS + + +V+ ++ V + + I LG V G P Sbjct: 40 VVGELCKIKANNSSDPIMAEVVGLDEGTVKLMSYSDLQGIELGSEVIAEGEILSVPVGDA 99 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVINALGK IDG + ++ P M+R+ + + TG+R ID + Sbjct: 100 LLGRVINALGKAIDGKQEVYSSK-RYPVLQTPPNPMDRKPIRQRIVTGVRAIDSLLAVGC 158 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+F+GSG+GKSTL+ M AR+ D +I+L+GERGREV +FIE LG + LKKSVV Sbjct: 159 GQRLGIFSGSGVGKSTLMGMIARNTNADVNVIALIGERGREVMDFIEHDLGPEGLKKSVV 218 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATSDESP+ R TA IAEYF +G +V+L+ DS+TRFA + REI +GE Sbjct: 219 VTATSDESPLARIRGAYTATAIAEYFRDQGKDVMLLFDSVTRFAKAQREIGLAAGEPAAT 278 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGY SVF LP+LLER G S KG+IT +VLVDGD+ ++PI+D+VR I+DGHIVL+ Sbjct: 279 RGYTPSVFETLPKLLERSGTS--SKGSITGFYTVLVDGDDLDEPISDAVRGIIDGHIVLS 336 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA+ YP +D L S+SRLA + + V ++ I +EE+ D+ +G Y+ G Sbjct: 337 RKLAQRSHYPAIDILNSISRLAHRVSGRFTNQAVLAMRKSIAIYEESADMIQVGAYQKGS 396 Query: 400 DLILDKAVHQVPIIYDFLKQSPSD 423 +DKA+ I +FL Q +D Sbjct: 397 SEEVDKAIALHQPIEEFLMQEVTD 420 >gi|59889770|emb|CAH19125.1| Lateral flagellar export/assembly protein (LfiI-like) [Escherichia coli] gi|284920034|emb|CBG33090.1| lateral flagellar specific ATP synthase (FliI-like) [Escherichia coli 042] Length = 445 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 153/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-SGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S + ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMREPASLELVQ 430 >gi|323181535|gb|EFZ66955.1| flagellum-specific ATP synthase [Escherichia coli 1357] Length = 445 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 153/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S + ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMREPASLELVQ 430 >gi|291613065|ref|YP_003523222.1| flagellar protein export ATPase FliI [Sideroxydans lithotrophicus ES-1] gi|291583177|gb|ADE10835.1| flagellar protein export ATPase FliI [Sideroxydans lithotrophicus ES-1] Length = 498 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 143/319 (44%), Positives = 201/319 (63%), Gaps = 2/319 (0%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+P+D L + S + S+ + R +++ G+R I+ + G Sbjct: 158 LGRVLDGAGRPLDQFGPLLESK-SAPLQSRPINPLERAAIKEALDVGVRAINSLLTVGRG 216 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFI D LG + L++SVVV Sbjct: 217 QRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFITDILGQEGLRRSVVV 276 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP++R A TIAEYF +G NVLLI+DS+TR+A + REIA GE P + Sbjct: 277 AAPADTSPLMRLQGAAYATTIAEYFRDQGKNVLLIMDSLTRYAMAQREIALAIGEPPATK 336 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP+L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 337 GYPPSVFAKLPQLVERAGNGAEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 396 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE+G YP +D AS+SR + S V H+ ++ D+ +G Y G D Sbjct: 397 RLAEQGHYPAIDIEASISRAMNHLVSPQHFLQVQRFKHMYAHYQRNHDLISVGAYVKGSD 456 Query: 401 LILDKAVHQVPIIYDFLKQ 419 +LD+A+ P + FLKQ Sbjct: 457 PLLDQAIQLYPHMEHFLKQ 475 >gi|170021371|ref|YP_001726325.1| FliI/YscN family ATPase [Escherichia coli ATCC 8739] gi|188494378|ref|ZP_03001648.1| lateral flagellar export/assembly protein LfiI [Escherichia coli 53638] gi|256020217|ref|ZP_05434082.1| FliI/YscN family ATPase [Shigella sp. D9] gi|300817283|ref|ZP_07097501.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1] gi|300936113|ref|ZP_07151053.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1] gi|332281379|ref|ZP_08393792.1| lateral flagellar export/assembly protein [Shigella sp. D9] gi|169756299|gb|ACA78998.1| ATPase, FliI/YscN family [Escherichia coli ATCC 8739] gi|188489577|gb|EDU64680.1| lateral flagellar export/assembly protein LfiI [Escherichia coli 53638] gi|300458733|gb|EFK22226.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1] gi|300530259|gb|EFK51321.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1] gi|323171050|gb|EFZ56699.1| flagellum-specific ATP synthase [Escherichia coli LT-68] gi|332103731|gb|EGJ07077.1| lateral flagellar export/assembly protein [Shigella sp. D9] Length = 445 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 153/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S + ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMREPASLELVQ 430 >gi|288942633|ref|YP_003444873.1| flagellar protein export ATPase FliI [Allochromatium vinosum DSM 180] gi|288898005|gb|ADC63841.1| flagellar protein export ATPase FliI [Allochromatium vinosum DSM 180] Length = 461 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 155/394 (39%), Positives = 229/394 (58%), Gaps = 6/394 (1%) Query: 46 GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104 G +H + +V+ + ++ P G E ++ G + + R P GR Sbjct: 62 GRAAIHTANGTRLGAEVVGFQGERTFLMPEGKLEGLAPGARIEPLEQARRIPVGPALLGR 121 Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 V++ALGKP+DG + +++ + P + R V + GIR ++ + GQRI Sbjct: 122 VVDALGKPLDGGGPIRTAEMAPIEGRPINP-LGRVPVTEPLDVGIRALNGLLSVGRGQRI 180 Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVAT- 223 G+FAGSG+GKS LL M R D +++ L+GERGREV EFI D L + +K VVVA Sbjct: 181 GLFAGSGVGKSVLLGMMTRHTAADVIVVGLIGERGREVNEFIYDILDEESRKRTVVVAVP 240 Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 +D+SP+LR+ + TIAE F +G NVLL++DS+TRFA REIA GE P +GY Sbjct: 241 ADQSPLLRQHGAWVSTTIAESFRDRGLNVLLLMDSLTRFAQGAREIAMAIGEPPATKGYS 300 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 SVF+ LP+L+ER G +K G+ITA +VL +GD+ NDPI DS R+ILDGH+VL+R +A Sbjct: 301 ASVFARLPQLVERAGNGDKGGGSITAFYTVLAEGDDQNDPIVDSARAILDGHVVLSREIA 360 Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403 E GRYP +D ASVSR+ + + +K +L+ + RD+ +G YR G D L Sbjct: 361 ETGRYPAIDVGASVSRVMSAVVTPEHQKAAYRFRNLMSTYARNRDLIAVGAYRKGSDPQL 420 Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D+AV P + +L Q+ + +S F++ ++L Sbjct: 421 DEAVAMNPRLEAYLGQNRLEKAS---FEDSRRQL 451 >gi|218778525|ref|YP_002429843.1| ATPase FliI/YscN [Desulfatibacillum alkenivorans AK-01] gi|218759909|gb|ACL02375.1| ATPase FliI/YscN [Desulfatibacillum alkenivorans AK-01] Length = 442 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 154/395 (38%), Positives = 238/395 (60%), Gaps = 9/395 (2%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CW 101 VC D V QG+ +V+ + + P G + I LG + + ++P + Sbjct: 42 VC--DLVTTQGRRIP--AEVVGFKEKRMLLMPYGEMQGIQLGCRIVPRQQQPLAPVGDAY 97 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI+ LG+P+D + D+ + + V A++R+ V + G+RVI+ F + G Sbjct: 98 LGRVIDGLGQPMDDKGPIAATDM-YPLYADVVNALHRRSVNQVSDVGVRVINSFITVGQG 156 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+ + AGSG+GKS L+ M +R D I++L+GERGREV++F+++ LG D + +S+VV Sbjct: 157 QRVAIMAGSGVGKSVLMGMISRHMASDVCIVALIGERGREVKDFVDEILGPDGMGRSIVV 216 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 ATSD SP++R A T+AEYF +G NV+L++DS+TRFA S R++ +GE P + Sbjct: 217 AATSDTSPLVRMRGAYLATTLAEYFRDQGKNVILMMDSVTRFAMSSRDVGLAAGEPPTVK 276 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GY S F +LP+LLER G S + KG+IT + +VLV+GD+ NDP+ D+VRSI+DGHIVL+R Sbjct: 277 GYTPSFFVKLPKLLERAG-SVQGKGSITGIYTVLVEGDDMNDPVGDAVRSIVDGHIVLSR 335 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LA +G YP VD LASVSR+ S + ++ ++ ++ D+ IG Y G D Sbjct: 336 KLANQGHYPAVDVLASVSRVMRATVSGEHTRMAQRFREVLAAYQNVEDLISIGAYVDGSD 395 Query: 401 LILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434 +D A + + FL+Q + +S E+ Q++T Sbjct: 396 PDVDYAKSMIGKMKQFLRQDMMEGVSYEECVQQLT 430 >gi|86151231|ref|ZP_01069446.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni 260.94] gi|121613240|ref|YP_999914.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni 81-176] gi|157414504|ref|YP_001481760.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni 81116] gi|167004874|ref|ZP_02270632.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni 81-176] gi|315123794|ref|YP_004065798.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841578|gb|EAQ58825.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni 260.94] gi|87250392|gb|EAQ73350.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni 81-176] gi|157385468|gb|ABV51783.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni 81116] gi|307747146|gb|ADN90416.1| Flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni M1] gi|315017516|gb|ADT65609.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 461 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 165/425 (38%), Positives = 239/425 (56%), Gaps = 12/425 (2%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59 NLE L ++L ++ NL G I+ I++ + L V GD V ++ +N + L Sbjct: 2 NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 V+ I Y+ P E +GD F +I S GRV++ +P DG + Sbjct: 57 AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + M IM AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 117 IEVSKY-MPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M ++ +++L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S S Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S + K L +E + IG Y+ G D LD+A+ + + FL Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414 Query: 419 QSPSD 423 Q+P + Sbjct: 415 QNPEE 419 >gi|323191525|gb|EFZ76786.1| flagellum-specific ATP synthase [Escherichia coli RN587/1] Length = 446 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 152/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-SGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S + ++ ++ + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSPEHQQSARAMKQHYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMHEPASLELVQ 430 >gi|315932002|gb|EFV10955.1| flagellar protein export ATPase FliI [Campylobacter jejuni subsp. jejuni 327] Length = 461 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 165/425 (38%), Positives = 239/425 (56%), Gaps = 12/425 (2%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59 NLE L ++L ++ NL G I+ I++ + L V GD V ++ +N + L Sbjct: 2 NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 V+ I Y+ P E +GD F +I S GRV++ +P DG + Sbjct: 57 AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + M IM AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 117 IEVSKY-MPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M ++ +++L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S S Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S + K L +E + IG Y+ G D LD+A+ + + FL Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414 Query: 419 QSPSD 423 Q+P + Sbjct: 415 QNPEE 419 >gi|83589626|ref|YP_429635.1| ATPase FliI/YscN [Moorella thermoacetica ATCC 39073] gi|83572540|gb|ABC19092.1| type III secretion system ATPase, FliI/YscN [Moorella thermoacetica ATCC 39073] Length = 436 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 158/401 (39%), Positives = 240/401 (59%), Gaps = 9/401 (2%) Query: 22 QGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEE 80 +GG ++ +T + T+ +G+ ++ + + +V+ ++ + P+G E Sbjct: 22 RGGKVTRVTGL--TIEARGLKAAIGELCRIYNNGSGPIVAEVVGFREEVTLLMPLGELEG 79 Query: 81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 I G V GR I GRV++ LG+ +DG L GD + ++ P ++R+ Sbjct: 80 IGPGCRVIATGRGHYIRVGEELLGRVLDGLGRSLDGT-VLVSGD-PQPVNNRPPNPLSRR 137 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+++ TG++ ID GQR+G+FAGSG+GKSTLL M AR D +I+L+GERG Sbjct: 138 RIKEVLATGVKAIDALLTCGCGQRVGIFAGSGVGKSTLLGMIARHSTADINVIALIGERG 197 Query: 200 REVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVR+FIE LG + L +S+VV ATSD+ ++R TA IAEYF +G NVLL++DS Sbjct: 198 REVRDFIEGDLGPEGLARSIVVAATSDQPALVRIKGAFTATAIAEYFRDQGKNVLLMMDS 257 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + RE+ GE P RGY SVF+ LP+L+ER G E+G+IT + +VLV+GD Sbjct: 258 LTRFAIAQREVGLAIGEPPTTRGYTPSVFASLPKLVERAG--NGERGSITGLYTVLVEGD 315 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + N+P+AD+VR +LDGHIVL+R LA YP +D L S+SRL + S ++++ L Sbjct: 316 DMNEPVADTVRGLLDGHIVLSRRLAAANHYPAIDVLQSISRLMPEITSREQQEQAGKLRD 375 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L+ ++E D+ IG Y+ G + +D A+ I FL+Q Sbjct: 376 LLAAYQEAADLIEIGAYQAGSNPRVDAALKYHEAIQSFLRQ 416 >gi|116696307|ref|YP_841883.1| flagellum-specific ATP synthase [Ralstonia eutropha H16] gi|113530806|emb|CAJ97153.1| Flagellum-specific ATP synthase [Ralstonia eutropha H16] Length = 491 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 152/333 (45%), Positives = 208/333 (62%), Gaps = 8/333 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM---SKVPPAMNRQRVEKGFKT 147 G R+ A GRV++A G+P+DG LG +ME+ ++ P M R +E T Sbjct: 133 GSKRLPVGAGLLGRVLDAAGRPLDG---LGPITAAMEVPLAGEQINPLM-RAPIETVLDT 188 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G+R I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE Sbjct: 189 GVRAINGMLTVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIE 248 Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + LG + +SVVV A +D SP+LR A +AEYF +G +VLLI+DS+TR+A + Sbjct: 249 NILGPEGRARSVVVAAPADTSPLLRMQGAAYATRLAEYFRDQGQHVLLIMDSLTRYAMAQ 308 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REIA GE P +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIAD Sbjct: 309 REIALAIGEPPATKGYPPSVFAKLPTLVERTGNGPEGGGSITAFYTVLTEGDDQQDPIAD 368 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 S R+ILDGHIVL+RSLAE G YP +D AS+SR ++ V L+ R++ Sbjct: 369 SARAILDGHIVLSRSLAESGHYPAIDVEASISRAMTALIPDEQFGSVRRFKQLMSRYQRN 428 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 RD+ +G Y PG D LD A+ P + FL+Q Sbjct: 429 RDLISVGAYVPGNDPELDLAMRLHPRMEAFLQQ 461 >gi|170026119|ref|YP_001722624.1| type III secretion system ATPase [Yersinia pseudotuberculosis YPIII] gi|169752653|gb|ACA70171.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis YPIII] Length = 445 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 157/363 (43%), Positives = 218/363 (60%), Gaps = 6/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDD 117 L +V+ I ++ + P + + G V G R+ A GR+++ LG PIDG Sbjct: 62 LAEVVSIEQEMALLSPFASSDGLRCGQWVTPLGHMHRVQVGADLAGRILDGLGAPIDGGP 121 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L G E+ P + RQ VE+ TG R ID GQRIG+FA +G+GKSTL Sbjct: 122 PL-TGQWR-ELDCPPPSPLTRQPVEQMLTTGGRAIDGILSCGEGQRIGIFAAAGVGKSTL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 LSM D ++++L+GERGREVREF+E L + ++VVVVATSD + R Sbjct: 180 LSMLCADSAADVMVLALIGERGREVREFLEQVLTPEARARTVVVVATSDRPALERLKGLS 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA T+AEYF +G VLL+ DS+TR+A + REI +GE P A +P SVF+ LPRLLER Sbjct: 240 TATTVAEYFRERGLKVLLLADSLTRYARAAREIGLAAGEPPAAGSFPPSVFANLPRLLER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S++ G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA G YP +D AS Sbjct: 300 TGNSDR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPAIDIAAS 357 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + SA + + L ++ ++E + IG Y+ G DL D+A+ + P I F Sbjct: 358 VSRIMPQIVSAGQLAMAQKLRRMLACYQEIELLVQIGEYQAGEDLQADEALQRYPAICAF 417 Query: 417 LKQ 419 L+Q Sbjct: 418 LQQ 420 >gi|310641546|ref|YP_003946304.1| flagellar protein export atpase flii [Paenibacillus polymyxa SC2] gi|309246496|gb|ADO56063.1| Flagellar protein export ATPase FliI [Paenibacillus polymyxa SC2] Length = 439 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 156/387 (40%), Positives = 241/387 (62%), Gaps = 8/387 (2%) Query: 50 VHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVIN 107 ++ GK + L +V+ + V + P+G + I G D+V + + G+V++ Sbjct: 48 IYPGKAAKPLQAEVVGFRDNKVLLMPLGELQSIGPGCDVVGTGKPLNVQVGSELLGKVLD 107 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 LG+P+DG SL ++ +P +NR RV++ G+R ID + GQR+G+ Sbjct: 108 GLGQPLDG--SLIPSRMARYSTFNIPSNPLNRPRVQEPISIGVRAIDGLLTIGKGQRVGI 165 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSD 225 FAGSG+GKSTL+ M AR+ D +I+L+GERGREV +FIE LG + L++SVV+VATSD Sbjct: 166 FAGSGVGKSTLMGMIARNTEADVNVIALIGERGREVLDFIERDLGPEGLERSVVIVATSD 225 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 + ++R L A TIAEYF +G NV+L++DS+TR+A + RE+ GE P RGY S Sbjct: 226 QPALIRIKGALIATTIAEYFRDRGLNVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPS 285 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VF+ LP+LLER G G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVLNR +A + Sbjct: 286 VFASLPKLLERAGTGPT--GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRGIANK 343 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 G +P +D LAS+SR+ + D+ ++ L+ ++++ D+ IG Y+ G + +D+ Sbjct: 344 GHFPAIDVLASISRVMKDIATRDQIDAAENIKRLMAIYKDSEDLINIGAYQQGSNAEIDE 403 Query: 406 AVHQVPIIYDFLKQSPSDLSSEDVFQE 432 ++ ++ I+DF +Q + + D +E Sbjct: 404 SMERIRDIWDFTRQRTDEKAELDEVRE 430 >gi|304404247|ref|ZP_07385909.1| ATPase, FliI/YscN family [Paenibacillus curdlanolyticus YK9] gi|304347225|gb|EFM13057.1| ATPase, FliI/YscN family [Paenibacillus curdlanolyticus YK9] Length = 441 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 158/380 (41%), Positives = 237/380 (62%), Gaps = 10/380 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + V + P+G E I G D+V + + G+V++ LG+P+DG S Sbjct: 62 EVVGFKDNKVILMPLGELESIGPGCDVVGTGKPLTVQVGSELLGKVLDGLGQPLDG--SF 119 Query: 120 GKGDLSMEIMSKVP--PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + + VP P M R RV++ G+R ID + GQR+G+FAGSG+GKSTL Sbjct: 120 IPSRMPHSSTNNVPNNPLM-RPRVKQPLGIGVRAIDGLLTVGQGQRVGIFAGSGVGKSTL 178 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 L M AR+ D +I+L+GERGREV EFIE LG + L +SVV+VATSD+ ++R L Sbjct: 179 LGMIARNTSADVNVIALIGERGREVLEFIEKDLGPEGLARSVVIVATSDQPALIRMKGAL 238 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A TIAEYF +G NV+L++DS+TR+A ++RE+ GE P RGY SVF+ LP+LLER Sbjct: 239 IATTIAEYFRDRGLNVMLMMDSVTRYAMALREVGLAIGEPPATRGYTPSVFAALPKLLER 298 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA +G +P +D LAS Sbjct: 299 AGTGPT--GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLSRDLAHQGHFPAIDVLAS 356 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ + + +++ +SL L+ ++ + D+ IG Y+ G + +D+A+ + I + Sbjct: 357 ISRVMKEIVTDEQQDAANSLKGLLATYKSSEDLINIGAYQYGSNAKIDQAIEAIDEIRAY 416 Query: 417 LKQSPSD-LSSEDVFQEITK 435 +Q ++ + ED Q++ + Sbjct: 417 TRQKTNEKVILEDAQQQLIQ 436 >gi|255523701|ref|ZP_05390667.1| ATPase FliI/YscN [Clostridium carboxidivorans P7] gi|296186704|ref|ZP_06855106.1| flagellar protein export ATPase FliI [Clostridium carboxidivorans P7] gi|255512570|gb|EET88844.1| ATPase FliI/YscN [Clostridium carboxidivorans P7] gi|296048741|gb|EFG88173.1| flagellar protein export ATPase FliI [Clostridium carboxidivorans P7] Length = 435 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 153/339 (45%), Positives = 220/339 (64%), Gaps = 15/339 (4%) Query: 103 GRVINALGKPIDGDD-SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 G+V++ LG+P++G++ +G + ++ P + R+R+++ TGIR ID FT G Sbjct: 102 GKVLDGLGQPLNGEEIDIGT---VYPLDTEPPDPLKRRRIKEVIPTGIRAIDGFTTCGEG 158 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 QRIG+FAGSG+GKST L M AR D +I+L+GERGREV++FIE LG+ +KKS++V Sbjct: 159 QRIGIFAGSGVGKSTTLGMIARYAEADVNVIALIGERGREVKDFIEKDLGEEGMKKSIIV 218 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 ATSD+ ++R TA IAEYF +G+ V+L++DS+TRFA + REI GE P + Sbjct: 219 CATSDKPALVRLKGAFTATAIAEYFRDRGNKVILMMDSVTRFAMAQREIGLAIGEPPATK 278 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GY SVF+ LPRL+ER G S+K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R Sbjct: 279 GYTPSVFAMLPRLMERAGMSDK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSR 336 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LA + YP +D L+S+SRL + + KK S L+ ++ + D+ IG Y G + Sbjct: 337 ALAAKNHYPAIDILSSISRLMSEVAEDEHKKAASFARDLLATYKNSEDLINIGAYVKGSN 396 Query: 401 LILDKAVHQVPIIYDFLKQ--------SPSDLSSEDVFQ 431 +D ++ I +LKQ S S LS E++FQ Sbjct: 397 EKVDTSIQYYDDIIGYLKQGMKEHTTFSESVLSLENIFQ 435 >gi|15639393|ref|NP_218842.1| flagellum-specific ATP synthase (fliI) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025635|ref|YP_001933407.1| flagellum-specific ATP synthase [Treponema pallidum subsp. pallidum SS14] gi|6016024|sp|O83417|FLII_TREPA RecName: Full=Flagellum-specific ATP synthase gi|3322685|gb|AAC65390.1| flagellum-specific ATP synthase (fliI) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018210|gb|ACD70828.1| flagellum-specific ATP synthase [Treponema pallidum subsp. pallidum SS14] gi|291059792|gb|ADD72527.1| flagellar protein export ATPase FliI [Treponema pallidum subsp. pallidum str. Chicago] Length = 447 Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 148/325 (45%), Positives = 202/325 (62%), Gaps = 4/325 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV+NA GK IDG + L E++ M R + + TG+RV+D + Sbjct: 100 ALLGRVLNAFGKAIDGKGEI-YAPLRSEVLRASSNPMERLPITRQMVTGVRVLDSLLAVG 158 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+F+GSG+GKSTL+ M AR+ D +I+L+GERGREV +F+ LG + LK+SV Sbjct: 159 CGQRLGIFSGSGVGKSTLMGMIARNTDADVSVIALIGERGREVMDFVAHDLGPEGLKRSV 218 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V ATSDESP+ R TA IAEYF +G VLL+ DS+TRFA + REI SGELP Sbjct: 219 IVSATSDESPLARVRGAYTATAIAEYFRDQGKQVLLLFDSLTRFAKAQREIGLASGELPA 278 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGY VF LP+LLER G G++TA +VLVDGD+ ++PI+D+VR I+DGHIVL Sbjct: 279 TRGYTPGVFETLPKLLERAG--SFSMGSVTAFYTVLVDGDDLDEPISDAVRGIVDGHIVL 336 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R+LA+ YP +D L SVSRLA + AD K+ V + + + E D+ +G Y+ G Sbjct: 337 SRALAQRNHYPAIDVLQSVSRLAHRVLGADMKEAVRIVRRALAVYAEVEDLVRVGAYQQG 396 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSD 423 D LD+A+ + FL Q + Sbjct: 397 SDAELDRAIAMRAELERFLTQGAQE 421 >gi|57237200|ref|YP_178212.1| flagellum-specific ATP synthase [Campylobacter jejuni RM1221] gi|57166004|gb|AAW34783.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni RM1221] gi|315057632|gb|ADT71961.1| Flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni S3] Length = 461 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 165/425 (38%), Positives = 240/425 (56%), Gaps = 12/425 (2%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59 NLE L ++L ++ NL G I+ I++ + L V GD V ++ +N + L Sbjct: 2 NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 V+ I Y+ P E +GD F +I S GRV++ +P DG + Sbjct: 57 AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + + M IM AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 117 I-EVTKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M ++ +++L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S S Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S + K L +E + IG Y+ G D LD+A+ + + FL Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414 Query: 419 QSPSD 423 Q+P + Sbjct: 415 QNPEE 419 >gi|149908454|ref|ZP_01897117.1| flagellum-specific ATP synthase [Moritella sp. PE36] gi|149808617|gb|EDM68552.1| flagellum-specific ATP synthase [Moritella sp. PE36] Length = 445 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 137/318 (43%), Positives = 201/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ +GKPIDG + G + ++ P + R+++ K G++ I+ + GQ Sbjct: 102 GRVLDGVGKPIDGKGEIITGQTTSFTAKRINP-LARKKISKPLDVGVKAINAMLTVGQGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FAGSG+GKS LL M R D V++ L+GERGREV+EFIE+ LG+ L +SVVV Sbjct: 161 RMGLFAGSGVGKSVLLGMMTRGSTADVVVVGLIGERGREVKEFIEEILGEEGLARSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R T++ IAEYF +G NVLL++DS+TRFA + REIA GE P +G Sbjct: 221 APADSSPLMRLKGCETSLAIAEYFRDQGLNVLLLMDSLTRFAQAQREIALAVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP+L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPQLVERAGNGSDEQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 L + G YP +D S+SR+ + + +++ +D+ IG Y G D Sbjct: 341 LTDAGHYPAIDIEKSISRVMPMVTTDFHQAAARGFKQAYSLYQQNKDLVAIGAYSKGSDA 400 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D+A+ P + FL+Q Sbjct: 401 KIDRAIRLKPAMDQFLQQ 418 >gi|110677657|ref|YP_680664.1| flagellum-specific ATP synthase [Roseobacter denitrificans OCh 114] gi|109453773|gb|ABG29978.1| flagellum-specific ATP synthase [Roseobacter denitrificans OCh 114] Length = 449 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 151/386 (39%), Positives = 229/386 (59%), Gaps = 2/386 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G + + + ++ L+ +GD VV + G++++++ D + I P E ++L Sbjct: 24 GRVCRVEAGVIHISGLAGKARIGDLVVVYRQGEPLSGEILQLDGDTLVILPDQDAEGVAL 83 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 D I+PS W GR+I+ G PIDG L +G + + S P R+ + Sbjct: 84 NDRAALLEARGIAPSQGWIGRIIDPFGNPIDGKPLL-RGAEARSLRSAPPEPALRRPMGT 142 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 TG+ V++ P+ GQR+G+FAGSG+GKS+LL A++ D V+++L+GERGRE+R Sbjct: 143 RLNTGMSVLNTMLPVVKGQRVGLFAGSGVGKSSLLGHLAQNMTADVVVVALIGERGRELR 202 Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 F+E+ LG + LK+SVV+ ATSD+SP++R+ A+++AE+F G + L++ DSITRF Sbjct: 203 HFVEEVLGPEGLKRSVVICATSDQSPLIRRRCAWAAMSVAEHFRDMGLSALILADSITRF 262 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A + RE+A SGE PV RGYP S + L ER GP E +G+IT + SVLV G + + Sbjct: 263 AEAHREVAVASGEAPVLRGYPPSTAHLIMSLCERAGPGEGAQGDITGIFSVLVAGSDMEE 322 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 PIAD +R +LDGHIVLNR +AE GRYP +D L S+SR A E +L+S + + Sbjct: 323 PIADILRGVLDGHIVLNREIAERGRYPAIDVLKSISRSLPAAADDIENELISIVRRYLSI 382 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVH 408 +E+ + G Y G D +D A+ Sbjct: 383 YEQNEMMIRAGLYSQGSDPDIDAAIQ 408 >gi|150390484|ref|YP_001320533.1| flagellar protein export ATPase FliI [Alkaliphilus metalliredigens QYMF] gi|149950346|gb|ABR48874.1| flagellar protein export ATPase FliI [Alkaliphilus metalliredigens QYMF] Length = 436 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 158/373 (42%), Positives = 228/373 (61%), Gaps = 11/373 (2%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G E I G V G I+ GR+++ LG PIDG + + Sbjct: 69 VLLMPLGEMEGIGPGSKVEATGSTLSINVGEALLGRILDGLGNPIDGKGPIEAHTAYPAM 128 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 S V P + R+ +++ G++ ID +GQRIG+FAGSG+GKSTLL M AR+ D Sbjct: 129 GSPVNPLL-RKTIKEPLSLGVKAIDGLLSCGNGQRIGIFAGSGVGKSTLLGMIARNTRAD 187 Query: 189 KVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+L+GERGREV+EFIE D + LK+SVV+VATSD+ ++R L A ++AEYF Sbjct: 188 INVIALIGERGREVKEFIEKDLKEEGLKRSVVIVATSDQPALIRMKGALLATSVAEYFRD 247 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 NV+L++DS+TRF+ + RE+ GE PV +GY SVF+ LP+LLER G S+K G I Sbjct: 248 HNKNVMLLMDSLTRFSMAQREVGLAIGEPPVTKGYTPSVFAILPKLLERSGTSDK--GAI 305 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T + +VLVDGD+ N+PIAD+VR ILDGHIVL+R +A YP +D LASVSR+ D Sbjct: 306 TGLYTVLVDGDDMNEPIADAVRGILDGHIVLSRKIANRNHYPAIDVLASVSRVMDSIVGK 365 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 + KL + L ++ + + D+ IG Y G + +D+A+ ++ + +FL Q+ + + Sbjct: 366 EHIKLANELKEILSTYNDAEDLINIGAYVKGSNPKIDRAIEKIDAVNEFLIQTTDE---K 422 Query: 428 DVFQE---ITKKL 437 FQE I KK+ Sbjct: 423 ITFQESVDIMKKI 435 >gi|170682099|ref|YP_001742360.1| lateral flagellar export/assembly protein LfiI [Escherichia coli SMS-3-5] gi|170519817|gb|ACB17995.1| lateral flagellar export/assembly protein LfiI [Escherichia coli SMS-3-5] Length = 445 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 152/376 (40%), Positives = 223/376 (59%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 ++A +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSVAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S + ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMREPASLELVQ 430 >gi|83816428|ref|YP_446712.1| flagellar protein export ATPase FliI [Salinibacter ruber DSM 13855] gi|83757822|gb|ABC45935.1| flagellar protein export ATPase FliI [Salinibacter ruber DSM 13855] Length = 442 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 203/320 (63%), Gaps = 4/320 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+A G+PIDG LG D I P ++R ++ TGIR ID F + Sbjct: 102 LLGRVIDAGGRPIDGKGPLGT-DAREPIHRDPPSPLDRPLIDTPLSTGIRSIDAFLKMGK 160 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQR G+FAGSG+GKSTLL M AR D +I+L+GERGREVREFI D LG+ L++SV+ Sbjct: 161 GQRTGIFAGSGVGKSTLLGMIARRAEADVNVIALIGERGREVREFIVDNLGEEGLRRSVL 220 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V T DE+ + R A A+ IAE+F +G +VLL++DSITR A + REI GE P Sbjct: 221 VAVTGDEAAMSRVKAASAAMAIAEHFRDRGQDVLLMMDSITRVAQAQREIGLAVGEPPTR 280 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF+ LPRLLER GP+E G IT + +VLV+GD+ ++PI+D+ R ILDGHIVL+ Sbjct: 281 RGYPPSVFALLPRLLERAGPAEA--GTITGIFTVLVEGDDMSEPISDAARGILDGHIVLS 338 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LAE G YP VD L SVSR+ + S + + L+ +EE D+ +G Y G Sbjct: 339 RELAEAGHYPAVDVLQSVSRVMPRVASLEAEAAAQEARELLSAYEEVEDLISVGAYEEGS 398 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D D+AV P + DFL+Q Sbjct: 399 DPETDRAVEAYPALADFLQQ 418 >gi|294508647|ref|YP_003572706.1| flagellum-specific ATP synthase [Salinibacter ruber M8] gi|294344976|emb|CBH25754.1| Flagellum-specific ATP synthase [Salinibacter ruber M8] Length = 448 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 156/320 (48%), Positives = 203/320 (63%), Gaps = 4/320 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+A G+PIDG LG D I P ++R ++ TGIR ID F + Sbjct: 108 LLGRVIDAGGRPIDGKGPLGT-DAREPIHRDPPSPLDRPLIDTPLSTGIRSIDAFLKMGK 166 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQR G+FAGSG+GKSTLL M AR D +I+L+GERGREVREFI D LG+ L++SV+ Sbjct: 167 GQRTGIFAGSGVGKSTLLGMIARRAEADVNVIALIGERGREVREFIVDNLGEEGLRRSVL 226 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V T DE+ + R A A+ IAE+F +G +VLL++DSITR A + REI GE P Sbjct: 227 VAVTGDEAAMSRVKAASAAMAIAEHFRDRGQDVLLMMDSITRVAQAQREIGLAVGEPPTR 286 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF+ LPRLLER GP+E G IT + +VLV+GD+ ++PI+D+ R ILDGHIVL+ Sbjct: 287 RGYPPSVFALLPRLLERAGPAEA--GTITGIFTVLVEGDDMSEPISDAARGILDGHIVLS 344 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LAE G YP VD L SVSR+ + S + + L+ +EE D+ +G Y G Sbjct: 345 RELAEAGHYPAVDVLQSVSRVMPRVASLEAEAAAQEARELLSAYEEVEDLISVGAYEEGS 404 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D D+AV P + DFL+Q Sbjct: 405 DPETDRAVEAYPALADFLQQ 424 >gi|195941358|ref|ZP_03086740.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi 80a] gi|216264447|ref|ZP_03436439.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 156a] gi|215980920|gb|EEC21727.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 156a] Length = 436 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 148/341 (43%), Positives = 222/341 (65%), Gaps = 4/341 (1%) Query: 81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 I +G+ V+ + I+ S GRVI++LG+PID S I K+ P +NR Sbjct: 78 IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINP-INRS 136 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 E TG++V+D F P+ GQR+G+F+GSG+GKSTLLSM A++ D +I+ +GERG Sbjct: 137 IFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLSMIAKNSNADVNVIAFIGERG 196 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 RE+ EFIE LG+ LKKSV+VV+TSDESPI R A IAEYF +G +V+L+ DS Sbjct: 197 RELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVVLLFDS 256 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 ITRFA++ RE++ + GE PVA+GYP SVF E+P LLER G + G++T +VLV+GD Sbjct: 257 ITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGD 315 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + +P+AD+++++LDGHI+L+R L + G YP ++ L+S SR + S +++KL+ + Sbjct: 316 DFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARN 375 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L+ +++ D+ G Y G + +D A+ + P I +F+ Q Sbjct: 376 LLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQ 416 >gi|308068655|ref|YP_003870260.1| flagellum-specific ATP synthase [Paenibacillus polymyxa E681] gi|305857934|gb|ADM69722.1| Flagellum-specific ATP synthase [Paenibacillus polymyxa E681] Length = 439 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 156/387 (40%), Positives = 240/387 (62%), Gaps = 8/387 (2%) Query: 50 VHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVIN 107 ++ GK + L +V+ + V + P+G + I G D+V + + G+V++ Sbjct: 48 IYPGKTAKPLQAEVVGFRDNKVLLMPLGELQSIGPGCDVVGTGKPLNVQVGSELLGKVLD 107 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 LG+P+DG SL ++ +P +NR RV++ G+R ID + GQR+G+ Sbjct: 108 GLGQPLDG--SLIPSRMARYSTFNIPSNPLNRPRVQEPISIGVRAIDGLLTIGKGQRVGI 165 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSD 225 FAGSG+GKSTL+ M AR+ D +I+L+GERGREV +FIE LG + L++SVV+VATSD Sbjct: 166 FAGSGVGKSTLMGMIARNTEADVNVIALIGERGREVLDFIERDLGPEGLERSVVIVATSD 225 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 + ++R L A TIAEYF +G NV+L++DS+TR+A + RE+ GE P RGY S Sbjct: 226 QPALIRIKGALIATTIAEYFRDRGLNVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPS 285 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VF+ LP+LLER G G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVLNR +A + Sbjct: 286 VFASLPKLLERAGTGPT--GSITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRGIANK 343 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 G +P +D LAS+SR+ D+ ++ L+ ++++ D+ IG Y+ G + +D+ Sbjct: 344 GHFPAIDVLASISRVMKDIAPRDQIDAAENIKRLMAVYKDSEDLINIGAYQQGSNAEIDE 403 Query: 406 AVHQVPIIYDFLKQSPSDLSSEDVFQE 432 ++ ++ I+DF +Q + + D +E Sbjct: 404 SMERIRDIWDFTRQRTDEKAELDEVRE 430 >gi|153951633|ref|YP_001397442.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. doylei 269.97] gi|152939079|gb|ABS43820.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. doylei 269.97] Length = 461 Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 164/425 (38%), Positives = 240/425 (56%), Gaps = 12/425 (2%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59 NLE L ++L ++ NL G I+ I++ + L +GD V ++ +N + L Sbjct: 2 NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLK--TGIGDIVKLVSNENENLNTL 56 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 V+ I Y+ P E +GD F +I S GRV++ +P DG + Sbjct: 57 AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + + M IM AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 117 I-EVTKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M ++ +++L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S S Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S + K L +E + IG Y+ G D LD+A+ + + FL Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414 Query: 419 QSPSD 423 Q+P + Sbjct: 415 QNPEE 419 >gi|126445125|ref|YP_001061232.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 668] gi|254182906|ref|ZP_04889499.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 1655] gi|254299701|ref|ZP_04967150.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 406e] gi|126224616|gb|ABN88121.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei 668] gi|157809533|gb|EDO86703.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 406e] gi|184213440|gb|EDU10483.1| flagellum-specific ATP synthase [Burkholderia pseudomallei 1655] Length = 435 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 161/397 (40%), Positives = 225/397 (56%), Gaps = 9/397 (2%) Query: 46 GDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACW 101 G+ V + + D + QV+ N + ++ P + G V G RI S W Sbjct: 41 GERCVIESADGDRIDAQVVGFNREETFLMPFKKPVGLVAGAQVLSCERQGLLRIGRS--W 98 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+ IDG LG GD + + ++ V G+R I+ L G Sbjct: 99 LGRIVNGLGEAIDGRGPLG-GDAVLRAHPAPVNPLRKRPVRDVLDVGVRAINGLLTLGRG 157 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QRIG+ AGSG+GKS LL M R+ D V++ L+GERGREVREF++ LG+ L KSV+V Sbjct: 158 QRIGLMAGSGVGKSMLLGMITRATQADVVVVGLIGERGREVREFVDHALGEAGLAKSVLV 217 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +DESP++R A IA +F G NVLL++DS+TR+A + REIA + GE P R Sbjct: 218 AAPADESPLMRLKAAELCHAIAAHFRDTGANVLLLVDSLTRYAMAQREIALSVGEPPATR 277 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF LP+L+E G E G+++A+ +VL +GD+ NDP+ D+ R+ILDGHIVL R Sbjct: 278 GYPPSVFGMLPQLVETAGNGEG-AGSMSAIYTVLAEGDDQNDPVVDTARAILDGHIVLTR 336 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D SVSR + A+ L + +I R E+ RD+ +GGY G D Sbjct: 337 ELAERGHYPAIDVPRSVSRCMSQVAGAEHGALARKVKEMIGRHEQIRDLIALGGYVQGAD 396 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D+AV + I FL+Q D++ D K+L Sbjct: 397 PATDEAVAKAARIDTFLRQDMLDVARHDATLAALKEL 433 >gi|253681702|ref|ZP_04862499.1| flagellar protein export ATPase FliI [Clostridium botulinum D str. 1873] gi|253561414|gb|EES90866.1| flagellar protein export ATPase FliI [Clostridium botulinum D str. 1873] Length = 439 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 163/393 (41%), Positives = 230/393 (58%), Gaps = 11/393 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG---DLVFHWGRFRISPSACWCGRV 105 ++ +N + +V+ D V + P +GE I +G ++ + S G+V Sbjct: 48 TIYNKENDPIMCEVVGFKEDNVILMP--LGELIGIGPGCRVIPSKNYLTVKCSDKLLGKV 105 Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165 +N LGK + DD + + P + R+R++ TG+R ID F GQR+G Sbjct: 106 LNGLGKSLKQDDEQLYIGTEYPLDTAPPDPLKRRRIKDSIATGVRAIDGFLTCGEGQRVG 165 Query: 166 VFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224 +FAGSG+GKST L M AR D +I+L+GERGREV +FIE LG+ LKKSV+V ATS Sbjct: 166 IFAGSGVGKSTTLGMIAREAKADVNVIALIGERGREVLDFIEKDLGEEGLKKSVIVCATS 225 Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 D+ ++R TA IAEYF KG V+L++DS+TRFA + RE+ GE P +GY Sbjct: 226 DQPALVRLKGAFTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTP 285 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 SVF+ LPRL+ER G SEK G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA Sbjct: 286 SVFAMLPRLMERSGMSEK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRALAG 343 Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD 404 + YP +D L SVSRL ++ + KK S L+ ++ + D+ IG Y G + +D Sbjct: 344 KNHYPAIDVLNSVSRLMNEIADDEHKKTASFARDLLATYKNSEDLINIGAYAQGSNSKVD 403 Query: 405 KAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 A+ I ++L+Q + S F E KL Sbjct: 404 MAIQYNDEINNYLRQGIKEHSE---FSESINKL 433 >gi|261407981|ref|YP_003244222.1| flagellar protein export ATPase FliI [Paenibacillus sp. Y412MC10] gi|329929287|ref|ZP_08283040.1| flagellar protein export ATPase FliI [Paenibacillus sp. HGF5] gi|261284444|gb|ACX66415.1| flagellar protein export ATPase FliI [Paenibacillus sp. Y412MC10] gi|328936656|gb|EGG33099.1| flagellar protein export ATPase FliI [Paenibacillus sp. HGF5] Length = 439 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 154/366 (42%), Positives = 230/366 (62%), Gaps = 7/366 (1%) Query: 70 VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G I G D+V + + G+V++ LG+P+DG S+ + Sbjct: 69 VLLMPLGELHSIGPGCDVVGTGKPLSVQVGSELLGKVLDGLGQPLDG--SIIPARMPHYS 126 Query: 129 MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 VP +NR RV++ G+R ID + GQR+G+FAGSG+GKSTL+ M AR+ Sbjct: 127 THNVPQNPLNRPRVQEPISIGVRAIDGLLSIGKGQRVGIFAGSGVGKSTLMGMIARNTSA 186 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+L+GERGREV +FIE LG + LK+SVV+VATSD+ ++R L A TIAEYF Sbjct: 187 DVNVIALIGERGREVLDFIERDLGPEGLKRSVVIVATSDQPALIRIKGALIATTIAEYFR 246 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G NV+L++DS+TR+A + RE+ GE P RGY SVF+ LP+LLER G G+ Sbjct: 247 DRGLNVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPSVFASLPKLLERAGTGPT--GS 304 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA +VLVDGD+ N+PIAD+VR ILDGHIVLNR++A +G +P +D LAS+SR+ Sbjct: 305 ITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRNIANKGHFPAIDVLASISRVMKDISP 364 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 ++ ++ L+ ++++ D+ IG Y+ G + +D+++ + I+DF KQ ++ ++ Sbjct: 365 EEQIDASENVKRLMAIYKDSEDLINIGAYQQGSNADIDESIEYIGRIWDFTKQKVNEKTT 424 Query: 427 EDVFQE 432 D QE Sbjct: 425 LDEVQE 430 >gi|289523571|ref|ZP_06440425.1| flagellar protein export ATPase FliI [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503263|gb|EFD24427.1| flagellar protein export ATPase FliI [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 442 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 160/381 (41%), Positives = 232/381 (60%), Gaps = 7/381 (1%) Query: 43 VCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSA 99 V +GD + ++ +S +V+ N D V + P+G +I G D+V + + Sbjct: 44 VRVGDLCEIRYRDSSSSLCAEVVGFNEDRVLLMPLGELADIGPGCDVVAVGQKLGVRVGP 103 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV+N LG+PID + GD+ + ++ P + R+ + G++ ID L Sbjct: 104 GLLGRVLNGLGEPIDDKGPVMAGDV-YPLYARPPHPLLRKSISSPLPVGVKAIDGMLTLG 162 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218 GQRIG+F+GSG+GKSTL+ M R+ + +I L+GERGREV EF+E LG + LK+SV Sbjct: 163 RGQRIGIFSGSGVGKSTLMGMMVRNTEAEVSVIGLIGERGREVGEFLERDLGSSGLKRSV 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VVVATSD+ P++R A LTA IAEYF KG +VLL++DSITR A + R++ GE P Sbjct: 223 VVVATSDQPPLVRLKAALTATAIAEYFRDKGKDVLLLMDSITRVAMAQRDVGLAIGEPPA 282 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGY SVF+ LP+LLER G E+G+IT + +VLV+GD+ N+P+AD+VR ILDGHIVL Sbjct: 283 TRGYTPSVFAFLPKLLERAGAG--ERGSITGIYNVLVEGDDMNEPVADTVRGILDGHIVL 340 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LA +G YP +D L SVSR+ S + L+ +E+ D+ IG Y+ G Sbjct: 341 SRKLASKGHYPAIDILRSVSRVMPNIVSQKHLAAAQRVRELLAIYEDAEDLVNIGAYKVG 400 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 + +D A+ + + DFL+Q Sbjct: 401 SNPNIDWALEHLDDVLDFLRQ 421 >gi|330719817|gb|EGG98317.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium IMCC2047] Length = 447 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 150/391 (38%), Positives = 234/391 (59%), Gaps = 4/391 (1%) Query: 32 VYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW 90 V T+ + V LGD N ++ +V+ + V++ P+G E I G V Sbjct: 32 VGLTLEAVGCNVALGDHCEIDMANGRHIEAEVVGFADNRVFLMPLGPVEGIRPGARVRPV 91 Query: 91 GRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 R + P GRV+N +G+P+D L + D + + ++R + + GI Sbjct: 92 QRSKEVPVGYGLLGRVLNGVGEPLDDKGPL-QADAKTGLEGQYINPLSRNPIHESLDVGI 150 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 R I+ + GQR+G+FAGSG+GKS LL M R D V++ LVGERGREV+EFI+D Sbjct: 151 RAINALLTVGRGQRLGLFAGSGVGKSVLLGMMTRFTEADIVVVGLVGERGREVKEFIDDC 210 Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG L ++VVV + +D+SP++R + + +IAEYF +G NVLL++DS+TR+A + RE Sbjct: 211 LGPAGLARAVVVASPADDSPLMRLRSAMLTTSIAEYFRDQGKNVLLLMDSLTRYAQAQRE 270 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 +A GE P +GYP SVF++LP+L+ER G + +G+ITA +VL +GD+ DP+AD+ Sbjct: 271 LALAVGEPPATKGYPPSVFAKLPQLVERAGNAAAGEGSITAFYTVLTEGDDQQDPVADAA 330 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R+ILDGHIVL+R LAE G YP +D ASVSR+ + + ++ +L + ++++ D Sbjct: 331 RAILDGHIVLSRRLAEAGHYPAIDVEASVSRVMPQVVNPEQMQLAQQFRQVYANYQQSSD 390 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +G Y G + D A+ ++P++ FL+Q Sbjct: 391 LISVGAYVAGSNPETDFAIQRMPVMKQFLQQ 421 >gi|220917455|ref|YP_002492759.1| ATPase, FliI/YscN family [Anaeromyxobacter dehalogenans 2CP-1] gi|219955309|gb|ACL65693.1| ATPase, FliI/YscN family [Anaeromyxobacter dehalogenans 2CP-1] Length = 435 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 159/382 (41%), Positives = 221/382 (57%), Gaps = 12/382 (3%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117 +V+ + D + P G + L V GR R P GRV++ LG+P+DG Sbjct: 58 EVVGLRDDRAVLVPFGDLGGVGLDAEVVPTGRAHTIRAGPG--LLGRVLDGLGRPLDGA- 114 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L G + P + R+ V G+RV+D F GQRIG+FAGSG+GKSTL Sbjct: 115 PLPAGLEEWAVDRPAPNPLARRPVAAPLPLGVRVLDGFLTAGEGQRIGLFAGSGVGKSTL 174 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 L AR D ++ LVGERGREVREF+E LG + L +SVVV ATSD ++R A Sbjct: 175 LGQLARGARADLCVVCLVGERGREVREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAH 234 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +AE+F+ +GD VLL++DS+TR+A ++RE+ +GE P +GYP SVF+ LPRLLER Sbjct: 235 VATAVAEWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLLER 294 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + +G ITAV +VLV G + +PIAD VR ILDGH+VL+R++A GR+P VDPL S Sbjct: 295 AG--NRARGGITAVYTVLVAGGDLEEPIADEVRGILDGHVVLDRAVASGGRFPAVDPLQS 352 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ + + L+ RD+ +G YR G D D A+ ++P I F Sbjct: 353 LSRVMPAVAAPAHLAAAGRVRALLAAHARVRDLVALGAYRAGADPEADLALARLPAIEAF 412 Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438 L+Q L F+E ++L+ Sbjct: 413 LRQP---LGEAAPFEETLRRLE 431 >gi|188588315|ref|YP_001920205.1| flagellar protein export ATPase FliI [Clostridium botulinum E3 str. Alaska E43] gi|251778789|ref|ZP_04821709.1| flagellar protein export ATPase FliI [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|188498596|gb|ACD51732.1| flagellar protein export ATPase FliI [Clostridium botulinum E3 str. Alaska E43] gi|243083104|gb|EES48994.1| flagellar protein export ATPase FliI [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 435 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 155/331 (46%), Positives = 215/331 (64%), Gaps = 8/331 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G +I+ LGKP+ G++ + D +E + P + R+R+++ TGIR ID F GQ Sbjct: 102 GEIIDGLGKPLRGEELVEGEDYPLE--NNPPDPLKRKRIKEIMPTGIRAIDGFLTCGDGQ 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKST L M AR D +I+L+GERGREV EFIE LG + +KKSVVV Sbjct: 160 RIGIFAGSGVGKSTTLGMIAREAKADVNVIALIGERGREVLEFIEKDLGPEGMKKSVVVC 219 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+ ++R LTA IAEYF KG V+L++DS+TRFA + RE+ GE P +G Sbjct: 220 ATSDKPALIRLKGALTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKG 279 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF++LP+L+ER G SE G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RS Sbjct: 280 YTPSVFAKLPKLMERSGTSED--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRS 337 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA + YP +D L SVSRL + + + S L+ ++E+ D+ IG Y G + Sbjct: 338 LAHKNHYPAIDILNSVSRLMNSIAPPEHIQAASIARDLLATYKESEDLINIGAYVKGSNK 397 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 +D A+ I +FL+Q+ ++ S+ F+E Sbjct: 398 KIDLAISYHDKIEEFLRQTVNEKSN---FEE 425 >gi|294141005|ref|YP_003556983.1| ATPase [Shewanella violacea DSS12] gi|293327474|dbj|BAJ02205.1| ATPase, FliI/YscN family [Shewanella violacea DSS12] Length = 441 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 164/377 (43%), Positives = 228/377 (60%), Gaps = 12/377 (3%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDG---D 116 +VI + D V + P + + G LV G ++ + GRV++ LG +DG D Sbjct: 65 EVIAVKGDEVLLSPFDVTSWLQTGALVEPMGHGHQVLLGSELLGRVVDGLGDVMDGYPLD 124 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + P ++R ++ GIR ID GQRIG+FA +G GKST Sbjct: 125 ACECRPNYG-----AAPNPLSRSLIDTVMPMGIRAIDSALACGVGQRIGIFAAAGGGKST 179 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235 LL M A D ++++LVGERGREVREFIE L + ++V+VVATSD P+ R A Sbjct: 180 LLGMIASHCEADVIVLALVGERGREVREFIEYNLTPEARARTVMVVATSDRPPLERMKAT 239 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LTA TIAEYF +G NVLL++DS+TRFA S REI+ +GE PV+ GYP SVF L L+E Sbjct: 240 LTATTIAEYFRDQGKNVLLMVDSLTRFARSAREISLAAGEAPVSNGYPPSVFVNLSALVE 299 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R GP+ K G+IT V +VLV+GDN N+PIAD VRS+LDGHIVL+R LA G YP +D A Sbjct: 300 RAGPAAK--GSITGVYTVLVEGDNMNEPIADEVRSLLDGHIVLSRKLAGAGHYPAIDINA 357 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 SVSR+ D+ + ++KK + + ++ ++E + + +G Y G D D+AV + I D Sbjct: 358 SVSRVMDQIVTQEQKKNAAKMRQMLALYDEVQLLLRVGEYVQGQDKQTDEAVMRYGAIKD 417 Query: 416 FLKQSPSDLSSEDVFQE 432 FL+QS + S +V Q+ Sbjct: 418 FLRQSVDEFSPYEVSQQ 434 >gi|224534379|ref|ZP_03674957.1| flagellar protein export ATPase FliI [Borrelia spielmanii A14S] gi|224514481|gb|EEF84797.1| flagellar protein export ATPase FliI [Borrelia spielmanii A14S] Length = 436 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 161/406 (39%), Positives = 245/406 (60%), Gaps = 6/406 (1%) Query: 36 VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93 V L +GD ++ Q N +V+ N V + I +G+ V+ + Sbjct: 32 VESLGPQCAIGDLCLIDQRNNKKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 I+ S GRVI++LG+PID S I K+ P +NR E+ TG++V+D Sbjct: 92 EINLSEELLGRVIDSLGRPIDNKGSFLNNRYKELIFKKINP-INRSIFEEQILTGVKVLD 150 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 F P+ GQR+G+F+G+G+GKSTLL M A++ D +I+ +GERGRE+ EFIE LG+ Sbjct: 151 GFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEFELGEE 210 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 LKKSV+VV+TSDESPI R A IAEYF +G +V L+ DSITRFA++ RE++ + Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLS 270 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE PVA+GYP SVF E+P LLER G + G++T +VLV+GD+ +P+AD+++++L Sbjct: 271 LGEPPVAKGYPPSVFVEIPILLERSGFN-GTGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHI+L+R L + G YP ++ L+S SR + S +++KL+ +L+ +++ D+ Sbjct: 330 DGHIILDRDLFDRGIYPSINILSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLVRT 389 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKL 437 G Y G + +D A+ + P I DF+ Q ++ E++ EI K L Sbjct: 390 GIYLKGSNKDVDFAISKYPRIIDFISQGINETFDFENLEDEIRKIL 435 >gi|168698707|ref|ZP_02730984.1| Flagellar biosynthesis/type III secretory pathway ATPase [Gemmata obscuriglobus UQM 2246] Length = 430 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 161/407 (39%), Positives = 237/407 (58%), Gaps = 10/407 (2%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEI 81 GG + S+T +TC + +GD ++ + L +VI D+ Y+ P E + Sbjct: 14 GGRLKSVTG---RMTC-AIPAAVGDHCAILPRDGEPVLAEVIGFENDLAYLVPFDAAENL 69 Query: 82 SLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 G V G+ + P+ GRVI+ LG+P+DG L L + PPAM RQR Sbjct: 70 QPGMPVLRKGKGLMVPTGKNLLGRVIDGLGRPLDGKGPLADCPLK-PVNRPAPPAMERQR 128 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 + + F TGIR ID GQR+G+FAGSG+GKSTLL A+ D +I+L+GERGR Sbjct: 129 IREPFVTGIRAIDSVLTCGGGQRVGIFAGSGVGKSTLLGEVAKGSQADVNVIALIGERGR 188 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV F+ED LG + + +SVV+VAT +++ ++R A +A+ IA+YF S+ NVL ++DS+ Sbjct: 189 EVAPFLEDVLGPEGMARSVVIVATCEQTALMRVRAAQSAIAIADYFRSESQNVLFVIDSL 248 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TR A + RE+ GE P +RGY SVF L +ER+G G ITA+++VLVDG + Sbjct: 249 TRLAMAQRELGLLLGEPPSSRGYTPSVFQTLANTVERLG--NAAVGGITALLTVLVDGGD 306 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 ++PIAD VR ++DGHIVL+R +AE G YP +D S+SR+A + K L + Sbjct: 307 MDEPIADYVRGLVDGHIVLDRKIAERGFYPAIDVSRSISRVATDVVDRESAKAARKLRAI 366 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + + +D+ IG Y G+D +DKA+ +P + FL+Q + SS Sbjct: 367 MATHADIQDMLRIGAYTRGMDPQVDKALELMPKVEKFLRQDVGERSS 413 >gi|52841984|ref|YP_095783.1| flagellum-specific ATP synthase FliI [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629095|gb|AAU27836.1| nucleotide binding protein FliI [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 450 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 153/370 (41%), Positives = 228/370 (61%), Gaps = 3/370 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + VY+ +G + I+ G + GR ++S GR++N G ID D Sbjct: 64 EVVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVSVGHQLLGRILNGSGMFID-DGPP 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G+ + ++ +V + R +E GIR I+ + GQRIG+FAGSG+GKS LL Sbjct: 123 GEMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLG 182 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M R D V++ L+GERGREV+EFIE LG + L+++VVV A +DESP++R A Sbjct: 183 MMTRFTEADVVVVGLIGERGREVKEFIECNLGLEGLRRAVVVAAPADESPLMRLHGAKVA 242 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +IAEYF +G +VLL++DS+TRFA + REIA + GE P +GYP SVF++LP+L+ER G Sbjct: 243 TSIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 302 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D AS+S Sbjct: 303 NGTSGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASIS 362 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S K + + +E+ +D+ L+G Y G D ++DKA+ V + D+L Sbjct: 363 RVMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLA 422 Query: 419 QSPSDLSSED 428 Q + S D Sbjct: 423 QGMDEQVSYD 432 >gi|148359301|ref|YP_001250508.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str. Corby] gi|296107348|ref|YP_003619048.1| flagellum-specific ATP synthase [Legionella pneumophila 2300/99 Alcoy] gi|1938361|gb|AAB52239.1| nucleotide binding protein FliI [Legionella pneumophila] gi|148281074|gb|ABQ55162.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str. Corby] gi|295649249|gb|ADG25096.1| flagellum-specific ATP synthase [Legionella pneumophila 2300/99 Alcoy] gi|307610456|emb|CBX00027.1| flagellum-specific ATP synthase FliI [Legionella pneumophila 130b] Length = 449 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 153/370 (41%), Positives = 228/370 (61%), Gaps = 3/370 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + VY+ +G + I+ G + GR ++S GR++N G ID D Sbjct: 63 EVVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVSVGHQLLGRILNGSGMFID-DGPP 121 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G+ + ++ +V + R +E GIR I+ + GQRIG+FAGSG+GKS LL Sbjct: 122 GEMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M R D V++ L+GERGREV+EFIE LG + L+++VVV A +DESP++R A Sbjct: 182 MMTRFTEADVVVVGLIGERGREVKEFIECNLGLEGLRRAVVVAAPADESPLMRLHGAKVA 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +IAEYF +G +VLL++DS+TRFA + REIA + GE P +GYP SVF++LP+L+ER G Sbjct: 242 TSIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D AS+S Sbjct: 302 NGTSGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASIS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S K + + +E+ +D+ L+G Y G D ++DKA+ V + D+L Sbjct: 362 RVMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLA 421 Query: 419 QSPSDLSSED 428 Q + S D Sbjct: 422 QGMDEQVSYD 431 >gi|109899349|ref|YP_662604.1| flagellum-specific ATP synthase [Pseudoalteromonas atlantica T6c] gi|109701630|gb|ABG41550.1| flagellar protein export ATPase FliI [Pseudoalteromonas atlantica T6c] Length = 444 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 170/441 (38%), Positives = 247/441 (56%), Gaps = 17/441 (3%) Query: 5 LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64 L + L + + VV G + + + T+ + + +G + Q + + +V+ Sbjct: 6 LGNIKALQQQVPQAPVVAAGKL--VRGIGLTLEAVGCQMPVGSQCLIQTVDGEIEAEVVG 63 Query: 65 INLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGD 123 I Y+ P + I G V R + P GRV++ G+P+DG LG Sbjct: 64 FAEHITYLMPTQAVKGIVPGSRVQPLNREQGLPVGMSLLGRVVDGNGQPLDG---LG--- 117 Query: 124 LSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 +++ +VP P MN R+ + + G+R I+ + GQR+G+FAGSG+GKS L Sbjct: 118 -AIKAEKRVPLTRPPMNPLSRKPIREPLDVGVRAINSMITVGSGQRMGLFAGSGVGKSVL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M R D V++ LVGERGREV+EFI+D LGD +KSVVV A +D SP++R Sbjct: 177 LGMMTRGTSADVVVVGLVGERGREVKEFIQDILGDEERQKSVVVAAPADTSPLMRLKGCE 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TAVTIAEYF KG NVLL++DS+TR+A + REIA GE P +GYP SVF+ LP L+ER Sbjct: 237 TAVTIAEYFRDKGMNVLLLVDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVER 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + +G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R LA+ G YP +D AS Sbjct: 297 AGNGGEHQGSITAFYTVLTEGDDLQDPIADSARAILDGHIVLSRQLADSGHYPAIDIEAS 356 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S + ++ + + +++ RD+ IG Y G D +D ++ P I F Sbjct: 357 ISRVMPMVVSPEHVQVARRIRQVYSTYQQNRDLISIGAYTRGNDPRIDLSIKAEPAINAF 416 Query: 417 LKQSPSDLSSEDVFQEITKKL 437 L+Q + D E KL Sbjct: 417 LQQGMQQILPFDESVETMVKL 437 >gi|66046683|ref|YP_236524.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. syringae B728a] gi|63257390|gb|AAY38486.1| ATPase FliI/YscN [Pseudomonas syringae pv. syringae B728a] Length = 452 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 3/353 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +EK G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + L R+++TRD+ +G Y G D D A+ P++ + +Q+ Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQA 428 >gi|240145503|ref|ZP_04744104.1| flagellar protein export ATPase FliI [Roseburia intestinalis L1-82] gi|257202318|gb|EEV00603.1| flagellar protein export ATPase FliI [Roseburia intestinalis L1-82] Length = 435 Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 152/374 (40%), Positives = 235/374 (62%), Gaps = 6/374 (1%) Query: 48 FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106 ++ + +N + +V+ + + P E I +G +V + G + G + Sbjct: 45 IIIDREQNISTMAEVVGFRDKHLLLMPFESVEGIGVGCIVENTGHPLTVKVGEELLGHTL 104 Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 + +G+P D ++ L D +E + P M R+ +++ G++ +D + GQRIG+ Sbjct: 105 DGIGRPTDVEELLLPYDYPVEALP--PDPMARKIIDEVLPLGVKAVDGLITVGKGQRIGI 162 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 FAGSG+GKSTLL MFAR+ D +I+L+GERGREVREF+E LG+ +K+SVV+VATSD Sbjct: 163 FAGSGVGKSTLLGMFARNTKADINVIALIGERGREVREFVERDLGEEGMKRSVVIVATSD 222 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 + ++R A TA IAEYF +G +VLL++DS+TRF+ + REI SGE PV RGYP S Sbjct: 223 KPALIRNKAAKTATAIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPS 282 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 V+SE+P+LLER G S +KG+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+R L ++ Sbjct: 283 VYSEMPKLLERAGTS--DKGSITGLYTVLVDGDDMNEPITDTARSILDGHIMLSRKLGQK 340 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 YP +D L S+SR+ +++ K+L L +++ + E D+ IG Y+ G + +D Sbjct: 341 NHYPAIDVLQSISRVMSSIATSEHKELAGKLRNVMATYNEAEDLINIGAYKNGTNREIDY 400 Query: 406 AVHQVPIIYDFLKQ 419 A+ + + +FL Q Sbjct: 401 AIQKNQAVNEFLMQ 414 >gi|115353163|ref|YP_775002.1| flagellar protein export ATPase FliI [Burkholderia ambifaria AMMD] gi|115283151|gb|ABI88668.1| flagellar protein export ATPase FliI [Burkholderia ambifaria AMMD] Length = 513 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 146/319 (45%), Positives = 201/319 (63%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D S+ S P ++R+ + G+R I+ + G Sbjct: 173 GRVVDASGRPLDGLGPLASKVDASLSAPSINP--LDREPIHSVLDVGVRAINALLTVGRG 230 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 231 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 290 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 291 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 350 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 351 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 410 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 411 ALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 470 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 471 AQLDRAIALYPRIESFLQQ 489 >gi|172062018|ref|YP_001809670.1| flagellar protein export ATPase FliI [Burkholderia ambifaria MC40-6] gi|171994535|gb|ACB65454.1| flagellar protein export ATPase FliI [Burkholderia ambifaria MC40-6] Length = 513 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 146/319 (45%), Positives = 201/319 (63%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D S+ S P ++R+ + G+R I+ + G Sbjct: 173 GRVVDASGRPLDGLGPLASKVDASLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 230 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 231 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 290 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 291 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 350 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 351 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 410 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 411 ALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 470 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 471 AQLDRAIALYPRIESFLQQ 489 >gi|226313066|ref|YP_002772960.1| flagellum-specific ATP synthase [Brevibacillus brevis NBRC 100599] gi|226096014|dbj|BAH44456.1| flagellum-specific ATP synthase [Brevibacillus brevis NBRC 100599] Length = 439 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 229/381 (60%), Gaps = 11/381 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDG 115 + +V+ + V + P+G EI G V GR ++ P G +++ LG+P G Sbjct: 58 IAEVVGFRENKVLLMPLGELTEIGPGCDVVATGRSLDVKVGPE--ILGSILDGLGRPYQG 115 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 SL G S + P + R R+++ G+R ID + GQR+G+FAGSG+GKS Sbjct: 116 --SLPFGLTSYPTNNMPPNPILRPRIQEPLSVGVRAIDGLLTIGKGQRVGIFAGSGVGKS 173 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMA 234 TL+ M AR+ D +I L+GERGREV EFIE LG+ LK+SVVVVATSD+ ++R Sbjct: 174 TLMGMIARNTTADINVIGLIGERGREVMEFIERDLGEEGLKRSVVVVATSDQPAMIRIKG 233 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 + A +IAEYF +G NV+L++DS+TRFA + RE+ GE P RGY SVF+ LP+L+ Sbjct: 234 AMIATSIAEYFRDRGMNVMLMMDSVTRFAMAQREVGLAIGEPPATRGYTPSVFAMLPKLM 293 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G ++K G+ITA +VLVD D+ NDPIAD+VR ILDGHIVL+R +A +G +P +D + Sbjct: 294 ERAGTADK--GSITAFYTVLVDSDDMNDPIADAVRGILDGHIVLDRKIAHKGHFPAIDVM 351 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 ASVSR+ ++ ++ L + F E D+ IG Y+PG + +D A+ II Sbjct: 352 ASVSRVMNEIVDSNHLDAARQLKKHLATFREAEDLINIGAYKPGSNREIDAAIRYRDIIS 411 Query: 415 DFLKQSPSDLSS-EDVFQEIT 434 F Q + S+ + Q +T Sbjct: 412 GFTAQGTHEPSTLQGAIQALT 432 >gi|218892348|ref|YP_002441215.1| type III secretion system ATPase [Pseudomonas aeruginosa LESB58] gi|218772574|emb|CAW28357.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa LESB58] Length = 440 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 148/336 (44%), Positives = 209/336 (62%), Gaps = 4/336 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R++ GRV++ LG+P DG + + PP M+R+ +E+ G+R Sbjct: 94 GMHRVAVGEHLLGRVLDGLGRPFDGSPP-AEPAAWYPVYRDAPPPMSRRLIERPLSLGVR 152 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 ID GQR+G+FA +G GKSTLL+ R+ D I++LVGERGREVREFIE L Sbjct: 153 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTILALVGERGREVREFIESDL 212 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ L++SV+VVATSD + R A A +IAEYF +G VLL++DS+TRFA + REI Sbjct: 213 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 272 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE P RGYP SVF+ LPRL+ER G SE+ G+ITA+ +VLV+GD+ ++P+AD R Sbjct: 273 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 330 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 SILDGHIVL+R LA YP +D L SVSR+ ++ D++ L + ++EE + Sbjct: 331 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 390 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 IG Y+ G D D+A+ ++ I +L+Q + S Sbjct: 391 LKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETS 426 >gi|37527629|ref|NP_930973.1| type III secretion system ATPase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787064|emb|CAE16139.1| Type III secretion component protein SctN [Photorhabdus luminescens subsp. laumondii TTO1] Length = 440 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 162/406 (39%), Positives = 236/406 (58%), Gaps = 27/406 (6%) Query: 35 TVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR 94 T++ L++ + F HQ + LG++ I+ + + P G ++ +GD + Sbjct: 57 TLSLLAEVI---GFQQHQALLTP-LGEMFGISSN-TEVSPTGAMHQVGVGDYLL------ 105 Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 G+V++ LG P G L + + P M+R+R+E G+R ID Sbjct: 106 --------GQVLDGLGNPFSGGQ-LPEPQAWYPVYRDAPAPMSRKRIEHPLSLGVRAIDG 156 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 GQR+G+FA +G GKSTLLS RS D +++L+GERGREVREFIE LG+ Sbjct: 157 LLTCGEGQRMGIFAAAGGGKSTLLSTLIRSAEVDVTVLALIGERGREVREFIESDLGEEG 216 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 LK+SV+VVATSD + R A A +IAEYF +G VLL++DS+TRFA + REI + Sbjct: 217 LKRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAA 276 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P RGYP SVF+ LPRL+ER G S +KG+ITA+ +VLV+GD+ +P+AD RSILD Sbjct: 277 GEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGDDMTEPVADETRSILD 334 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHI+L+R LA YP +D L S SR+ ++ + + + L + ++EE + IG Sbjct: 335 GHIILSRKLAAANHYPAIDVLRSASRVMNQIITPEHQAQAGLLRKWLAKYEEVELLLQIG 394 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL-SSEDVFQEITK 435 Y+ G D + D A+ + I ++L+Q PSDL + Q+ITK Sbjct: 395 EYQKGQDPVADNAIAHIEAIRNWLRQGTHEPSDLPQTLAQLQQITK 440 >gi|330961223|gb|EGH61483.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 452 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 3/353 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +EK G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + L R+++TRD+ +G Y G D D A+ P++ + +Q+ Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQA 428 >gi|225552414|ref|ZP_03773354.1| flagellar protein export ATPase FliI [Borrelia sp. SV1] gi|225371412|gb|EEH00842.1| flagellar protein export ATPase FliI [Borrelia sp. SV1] Length = 436 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 156/387 (40%), Positives = 235/387 (60%), Gaps = 5/387 (1%) Query: 36 VTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93 V L +GD + +N + +V+ N V + I +G+ V+ + Sbjct: 32 VESLGPQCAIGDLCLIDQRNGKKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 I+ S GRVI++LG+PID S I K+ P +NR E TG++V+D Sbjct: 92 EINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINP-INRSIFEDQILTGVKVLD 150 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 F P+ GQR+G+F+GSG+GKSTLL M A++ D +I+ +GERGRE+ EFIE LG+ Sbjct: 151 GFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 LKKSV+VV+TSDESPI R A IAEYF +G +V L+ DSITRFA++ RE++ + Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLS 270 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE PVA+GYP SVF E+P LLER G + G++T +VLV+GD+ +P+AD+++++L Sbjct: 271 LGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHI+L+R L + G YP ++ L+S SR + S +++KL+ +L+ +++ D+ Sbjct: 330 DGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRT 389 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419 G Y G + +D A+ + P I DF+ Q Sbjct: 390 GIYLKGSNKDVDFAISKYPKIIDFISQ 416 >gi|283955375|ref|ZP_06372874.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni 414] gi|283793135|gb|EFC31905.1| flagellum-specific ATP synthase FliI [Campylobacter jejuni subsp. jejuni 414] Length = 459 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 165/425 (38%), Positives = 238/425 (56%), Gaps = 12/425 (2%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59 NLE L ++L ++ NL G I+ I++ + L V GD V ++ +N + L Sbjct: 2 NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 V+ I Y+ P E +GD F +I S GRV++ +P DG S Sbjct: 57 AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGS 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + M IM AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 117 IEVSKY-MPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M ++ +++L+GERGRE+ EFI+ LG +V++VATSD+S ++RK A Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKFDDTVLIVATSDDSALMRKYGAFCA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERAG 295 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+ KG ITA +VLVDGD+ +DPIAD RSILDGHIVL+R L + G YPP++ S S Sbjct: 296 -KEEGKGTITAFFTVLVDGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPINIQNSAS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S + K L +E + IG Y+ G D LD+A+ + + FL Sbjct: 355 RVMSDIISPEHKLWARKFKRLNSLLKENEVLLRIGAYQKGSDKELDEAISKKEFMQKFLG 414 Query: 419 QSPSD 423 Q+P + Sbjct: 415 QNPEE 419 >gi|323975941|gb|EGB71035.1| flagellar protein export ATPase FliI [Escherichia coli TW10509] gi|327254539|gb|EGE66155.1| flagellum-specific ATP synthase [Escherichia coli STEC_7v] Length = 445 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 152/376 (40%), Positives = 222/376 (59%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ + ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTRPEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMREPASLELVQ 430 >gi|28869165|ref|NP_791784.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv. tomato str. DC3000] gi|213967558|ref|ZP_03395706.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv. tomato T1] gi|302059426|ref|ZP_07250967.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tomato K40] gi|302134809|ref|ZP_07260799.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852405|gb|AAO55479.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv. tomato str. DC3000] gi|213927859|gb|EEB61406.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv. tomato T1] gi|331017001|gb|EGH97057.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 452 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 3/353 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +EK G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + L R+++TRD+ +G Y G D D A+ P++ + +Q+ Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQA 428 >gi|170700808|ref|ZP_02891799.1| flagellar protein export ATPase FliI [Burkholderia ambifaria IOP40-10] gi|170134295|gb|EDT02632.1| flagellar protein export ATPase FliI [Burkholderia ambifaria IOP40-10] Length = 513 Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 146/319 (45%), Positives = 201/319 (63%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D S+ S P ++R+ + G+R I+ + G Sbjct: 173 GRVVDASGRPLDGLGPLASKVDASLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 230 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 231 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 290 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 291 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 350 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 351 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 410 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 411 ALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 470 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 471 AQLDRAIALYPRIESFLQQ 489 >gi|283782095|ref|YP_003372850.1| ATPase, FliI/YscN family [Pirellula staleyi DSM 6068] gi|283440548|gb|ADB18990.1| ATPase, FliI/YscN family [Pirellula staleyi DSM 6068] Length = 455 Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 148/321 (46%), Positives = 203/321 (63%), Gaps = 4/321 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+A G+ ID + D + + K P A +R R++ F TG+R ID Sbjct: 96 LLGRVIDARGRVIDNKPAPVLAD-RVPLDRKPPAATSRPRIDTTFSTGVRAIDGLLTCGV 154 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQRIGVFAGSG+GKS L M A+ D ++I L+GERGREV EF+E LG L +SV Sbjct: 155 GQRIGVFAGSGVGKSVTLGMMAKYSSADVIVIGLIGERGREVNEFLERDLGPTGLARSVC 214 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSDE I+R A TA +AEYF +G NVLL++DS+TRFA + REI +GE P Sbjct: 215 VVATSDEPAIMRVQAASTATAVAEYFRDQGKNVLLMMDSLTRFALAQREIGLAAGEPPTT 274 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF+ LPRL+ER G +G+ITA+ SVLV+GD+ N+P++D+VR +LDGH++L+ Sbjct: 275 RGYPPSVFALLPRLVERAG--RTPQGSITAIYSVLVEGDDVNEPVSDTVRGLLDGHVILS 332 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA + YP ++ L S+SRL + + ++ + + L+ + E D+ IG YR G Sbjct: 333 RKLAAQSHYPAIEVLGSISRLFTEITTPQQRSAAAIVRELLSAYREHEDLISIGAYRTGA 392 Query: 400 DLILDKAVHQVPIIYDFLKQS 420 + +D A+ I FLKQS Sbjct: 393 NPTVDTAIAMRGEILQFLKQS 413 >gi|330876013|gb|EGH10162.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967114|gb|EGH67374.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. actinidiae str. M302091] Length = 452 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 3/353 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +EK G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + L R+++TRD+ +G Y G D D A+ P++ + +Q+ Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQA 428 >gi|237799238|ref|ZP_04587699.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022093|gb|EGI02150.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 394 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 3/353 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 19 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 78 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 79 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 137 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 138 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 197 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +EK G+I Sbjct: 198 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSI 257 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 258 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 317 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + L R+++TRD+ +G Y G D D A+ P++ + +Q+ Sbjct: 318 EHMAQAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQA 370 >gi|121533760|ref|ZP_01665587.1| flagellar protein export ATPase FliI [Thermosinus carboxydivorans Nor1] gi|121307751|gb|EAX48666.1| flagellar protein export ATPase FliI [Thermosinus carboxydivorans Nor1] Length = 439 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 163/366 (44%), Positives = 225/366 (61%), Gaps = 15/366 (4%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + V + P+G E I G V R ++ GRV++ LG PIDG + Sbjct: 60 EVVGFRPNHVLLMPIGELEGIGPGCSVIAANRTLKVGVGPDLLGRVLDGLGNPIDGKGPV 119 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + PP ++R+R+ + G+R ID F L GQR+G+ AGSG+GKSTLL Sbjct: 120 ATA-AEYPLHALPPPPLSRRRITEPLSVGVRAIDGFLTLGRGQRVGIMAGSGVGKSTLLG 178 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M AR+ D +I+L+GERGREVREFIE LG D LK+SVVVVATSD+ ++R +TA Sbjct: 179 MIARNTEADISVIALIGERGREVREFIERDLGEDGLKRSVVVVATSDQPALVRIKGAMTA 238 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAE+F +G +V L++DS+TRFA + RE+ GE P RGY SVF+ LP+LLER G Sbjct: 239 TAIAEFFRDQGKDVTLMMDSVTRFAMAQREVGLTVGEPPATRGYTPSVFAMLPKLLERSG 298 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 +KG+IT + +VL DGD+ N+PIAD+VRSILDGHIVL+R LA + YP +D LASVS Sbjct: 299 TG--DKGSITGIYTVLADGDDMNEPIADAVRSILDGHIVLSRDLAAQNHYPAIDVLASVS 356 Query: 359 R----LADKA-WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 R + DK W A +K L ++ + E D+ IG Y G + +D+AV + + Sbjct: 357 RVMLDIVDKEHWQAAQK-----LRSVLATYHEAEDLINIGAYAAGSNPRIDQAVRLIDGV 411 Query: 414 YDFLKQ 419 FL+Q Sbjct: 412 RRFLRQ 417 >gi|304312790|ref|YP_003812388.1| Flagellum-specific atp synthase [gamma proteobacterium HdN1] gi|301798523|emb|CBL46753.1| Flagellum-specific atp synthase [gamma proteobacterium HdN1] Length = 454 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 149/376 (39%), Positives = 223/376 (59%), Gaps = 3/376 (0%) Query: 46 GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGR 104 G ++ D +V+ + D +++ PV + GD V + R+ GR Sbjct: 60 GHCIIRNQDIGDVEAEVVGFSGDKLFLMPVEASLGLKPGDRVIPFREVSRVPVGMQLLGR 119 Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 V++ GKP+DG +L + + P + R + G+R I+ + GQR+ Sbjct: 120 VLDGRGKPLDGKGALDMHNAESLQREAINP-LQRTPISMPLDVGVRAINGLLAVGRGQRM 178 Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVAT 223 G+FAGSG+GKS LL M + D ++ L+GERGREV+EFIE LG+ LK+SVVV + Sbjct: 179 GLFAGSGVGKSVLLGMMTKFTTADITVVGLIGERGREVKEFIEQILGEEGLKRSVVVASP 238 Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 +DESP++R A + IAE+F +G NVLL++DS+TR+A + REIA + GE P +GYP Sbjct: 239 ADESPLMRLRAAVLCTAIAEHFRDQGKNVLLLMDSLTRYAQAQREIALSVGEPPATKGYP 298 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 SVF++LP L+ER G + G+ITA +VL +GD+ DP+ADS R+ILDGHIVL+R+LA Sbjct: 299 PSVFAKLPALVERAGNGREGGGSITAFYTVLTEGDDVQDPVADSARAILDGHIVLSRALA 358 Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403 EEG+YP +D AS+SR + SA+ K L R++++RD+ +G Y G D Sbjct: 359 EEGQYPAIDIEASISRAMPQIVSAEHLKKAQGFKRLYARYQQSRDLISVGAYVKGSDRET 418 Query: 404 DKAVHQVPIIYDFLKQ 419 D A+ ++ + +L Q Sbjct: 419 DLAISKIAHLKGYLSQ 434 >gi|119899009|ref|YP_934222.1| ATP synthase [Azoarcus sp. BH72] gi|119671422|emb|CAL95335.1| ATP synthase [Azoarcus sp. BH72] Length = 468 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 145/321 (45%), Positives = 197/321 (61%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L + V P +NR + + GIR I+ + Sbjct: 125 AMLGRVVDGAGRPLDGLGPLNTVETRSLQGRPVNP-LNRAPIAQPLDVGIRAINSLLTVG 183 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS L+ M AR D +++ L+GERGREV+EFIE LG + K+SV Sbjct: 184 RGQRLGLFAGSGVGKSVLIGMMARFTSADIIVVGLIGERGREVKEFIEHNLGAEGRKRSV 243 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP++R A TIAEYF +G VLLI+DS+TR+A + REIA GE PV Sbjct: 244 VVAAPADNSPLMRLQGAAYATTIAEYFRDQGKQVLLIMDSLTRYAMAQREIALAIGEPPV 303 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGYP SVF+ LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH VL Sbjct: 304 TRGYPPSVFARLPALVERAGNGPDGGGSITAFYTVLAEGDDQQDPIADSARAILDGHFVL 363 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R+LA++G YP +D S+SR LV L R++ +RD+ +G Y+PG Sbjct: 364 SRNLADQGHYPAIDIEQSISRAMHTLVDNAHFDLVRRFKQLFSRYQRSRDLIAVGAYQPG 423 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 + +LD AV P + FL+Q Sbjct: 424 AEPLLDMAVALYPRLEAFLQQ 444 >gi|171321711|ref|ZP_02910628.1| flagellar protein export ATPase FliI [Burkholderia ambifaria MEX-5] gi|171093012|gb|EDT38244.1| flagellar protein export ATPase FliI [Burkholderia ambifaria MEX-5] Length = 517 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 146/319 (45%), Positives = 201/319 (63%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D S+ S P ++R+ + G+R I+ + G Sbjct: 177 GRVVDASGRPLDGLGPLASKVDASLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 234 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 235 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 294 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 295 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 354 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 355 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 414 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 415 ALAEAGHYPAIDIEASISRAMTALIDETHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 474 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 475 AQLDRAIALYPRIESFLQQ 493 >gi|300871682|ref|YP_003786555.1| flagellar biosynthesis/type III secretory pathway ATPase FliI [Brachyspira pilosicoli 95/1000] gi|300689383|gb|ADK32054.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI [Brachyspira pilosicoli 95/1000] Length = 489 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 163/390 (41%), Positives = 236/390 (60%), Gaps = 10/390 (2%) Query: 42 YVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPS 98 + LGD + KN D +VI V + G I+ G++V+ + + I S Sbjct: 55 FAKLGD-ICRIYKNDDTYIDAEVIGFRNQDVLLSTYGSVNGITFGNMVYSFDKPLSIICS 113 Query: 99 ACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 G V+N +GKP+ G + + + S P +NR R++K +TG+R ID Sbjct: 114 EKILGTVLNGMGKPLSGGGHKFYETPIPINHTSVNP--LNRPRIKKNIQTGVRAIDGLLT 171 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 + GQR+ + +G+G+GKSTLLSM AR+ D +I+L+GER REV +FIE LG+ LK+ Sbjct: 172 VGKGQRMAIMSGTGVGKSTLLSMIARNTNADVNVIALIGERRREVLDFIERDLGEEGLKR 231 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 SVVVVATSD++P+LR A TA TIAEYF +G +V+ ++DS+TRFA + REI + GE Sbjct: 232 SVVVVATSDDAPLLRVRAAYTATTIAEYFRDQGKDVMFMVDSVTRFALAQREIGLSRGEP 291 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P RGY SVFSEL +LLER G S KG ITA +VLV+GD+ ++PI D+VR ILDGHI Sbjct: 292 PTTRGYTPSVFSELAQLLERTGTS--SKGTITAFYNVLVEGDDLDEPITDAVRGILDGHI 349 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LA G +P +D S+SR+ ++ S KK + + E +++ +IGGY Sbjct: 350 VLSRDLANRGHFPAIDINKSISRIMNEVVSNMHKKAAREFLKMSADYNEVKELIMIGGYA 409 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 G +D+A+ P++ +L+Q +LSS Sbjct: 410 KGSMPEVDRAIEYKPLMDRYLQQDMYELSS 439 >gi|302878296|ref|YP_003846860.1| flagellar protein export ATPase FliI [Gallionella capsiferriformans ES-2] gi|302581085|gb|ADL55096.1| flagellar protein export ATPase FliI [Gallionella capsiferriformans ES-2] Length = 500 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 143/318 (44%), Positives = 199/318 (62%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ GKP+D L + S + S+ + R ++ G+R I+ + GQ Sbjct: 161 GRVLDGAGKPLDQLGPLLE-TASAPLQSRPFNPLERASIDTPLDVGVRAINALLSVGRGQ 219 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D ++ L+GERGREV+EFI D LG + + +SVVV Sbjct: 220 RMGLFAGSGVGKSVLLGMMARYTSADVTVVGLIGERGREVKEFINDILGPEGMARSVVVA 279 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +D SP++R A TIAEYF +G NVLLI+DS+TRFA + REIA GE P +G Sbjct: 280 TPADTSPLMRLQGTAYATTIAEYFRDQGKNVLLIMDSLTRFAMAQREIALAVGEPPATKG 339 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP+L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 340 YPPSVFAKLPQLVERAGNGLEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 399 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 L E+G YP +D AS+SR+ + + + LV L ++ RD+ +G Y G D Sbjct: 400 LVEQGHYPAIDIEASISRVMSRLATPEHAALVQRFKQLYAHYQRNRDLISVGAYINGSDP 459 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LD+A+ P + FLKQ Sbjct: 460 LLDEAIKLYPKMEQFLKQ 477 >gi|125972989|ref|YP_001036899.1| flagellar protein export ATPase FliI [Clostridium thermocellum ATCC 27405] gi|256004786|ref|ZP_05429761.1| ATPase, FliI/YscN family [Clostridium thermocellum DSM 2360] gi|281417200|ref|ZP_06248220.1| flagellar protein export ATPase FliI [Clostridium thermocellum JW20] gi|125713214|gb|ABN51706.1| type III secretion system ATPase, FliI/YscN [Clostridium thermocellum ATCC 27405] gi|255991236|gb|EEU01343.1| ATPase, FliI/YscN family [Clostridium thermocellum DSM 2360] gi|281408602|gb|EFB38860.1| flagellar protein export ATPase FliI [Clostridium thermocellum JW20] gi|316940775|gb|ADU74809.1| ATPase, FliI/YscN family [Clostridium thermocellum DSM 1313] Length = 437 Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 146/325 (44%), Positives = 212/325 (65%), Gaps = 12/325 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GRVI+ +G+PIDG KG++ E + +K P + R R+++ G++ ID Sbjct: 100 ALIGRVIDGMGRPIDG-----KGEIVTETTYPVENKPPHPLKRNRIKEPLPLGVKTIDGL 154 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNL 214 + GQR+G+FAGSG+GKSTL+ M AR+ D +I+L+GERGREVREFIE D + L Sbjct: 155 LTVGKGQRVGIFAGSGVGKSTLIGMIARNTKADVNVIALIGERGREVREFIEKDLKEEGL 214 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K+SVVVVATSD+ ++R L A IAEYF +G +VLL++DS+TRFA + REI + G Sbjct: 215 KRSVVVVATSDQPALIRLKGALMATAIAEYFRDQGKDVLLLMDSLTRFAMAQREIGLSIG 274 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E PV+RGY SVFS +P+LLER G S + G+IT + +VLVDGD+ +P+ D+ R ILDG Sbjct: 275 EPPVSRGYTPSVFSIMPKLLERAGNS--QSGSITGLYTVLVDGDDLTEPVTDTARGILDG 332 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+R+LA + +YP +D LASVSR+ + +K+ + + + + E D+ +G Sbjct: 333 HIVLSRNLANKNQYPAIDVLASVSRVMPDIVDDEHQKIANDIKKTMAIYREAEDLINVGA 392 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G + +D A+ + I +F+KQ Sbjct: 393 YAKGSNEKIDYAIEVIDKIQEFIKQ 417 >gi|302387793|ref|YP_003823615.1| ATPase, FliI/YscN family [Clostridium saccharolyticum WM1] gi|302198421|gb|ADL05992.1| ATPase, FliI/YscN family [Clostridium saccharolyticum WM1] Length = 433 Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 152/350 (43%), Positives = 223/350 (63%), Gaps = 11/350 (3%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP--PAMNRQRVEKGFKTGI 149 R +I GR+I+A G+P+DG G D S + P + R + + G+ Sbjct: 88 RLKIPVGDFLRGRIIDAKGEPMDGK---GPFDSSRYYYVENPYINPLTRPPITDRLEFGV 144 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 + ID + GQRIG+FAGSG+GKSTLL M AR+ D +++LVGERGREVREFIE Sbjct: 145 KAIDGMNTIGKGQRIGIFAGSGVGKSTLLGMIARNVKADINVVALVGERGREVREFIEKD 204 Query: 210 LG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG + +++SV+VVATSD+ +LR PL A TIAEYF ++G +VLL++DS+TRFA + RE Sbjct: 205 LGPEGMERSVLVVATSDQPAMLRMKCPLVATTIAEYFKNQGKDVLLMMDSLTRFAMAQRE 264 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I GE PVARGY S+++E P+LLER G +G+IT + +VLV+GD+ N+PIAD+V Sbjct: 265 IGLAIGEPPVARGYTPSIYAEFPKLLERSG--NFGEGSITGIYTVLVEGDDTNEPIADTV 322 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R I+DGHIVL+R LA +P +D AS+SRL S + ++L S + ++ +E+ D Sbjct: 323 RGIVDGHIVLSRKLANANHFPAIDVSASISRLMTNIVSEEHRRLASEIRDILSIYEKNED 382 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + IG Y+ G + LD+A+ ++ + FL Q + D +++I K++ Sbjct: 383 LISIGAYKSGTNPKLDQAIARIDKVNQFLCQG---IQENDSYEDILVKMK 429 >gi|315648135|ref|ZP_07901236.1| flagellar protein export ATPase FliI [Paenibacillus vortex V453] gi|315276781|gb|EFU40124.1| flagellar protein export ATPase FliI [Paenibacillus vortex V453] Length = 439 Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 153/366 (41%), Positives = 230/366 (62%), Gaps = 7/366 (1%) Query: 70 VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G I G D+V + + G+V++ LG+P+DG S+ + Sbjct: 69 VLLMPLGELHSIGPGCDVVGTGKPLSVQVGSELLGKVLDGLGQPLDG--SIIPARMPHYS 126 Query: 129 MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 VP +NR RV++ G+R ID + GQR+G+FAGSG+GKSTL+ M AR+ Sbjct: 127 THNVPQNPLNRPRVQEPISIGVRAIDGLLSIGKGQRVGIFAGSGVGKSTLMGMIARNTSA 186 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+L+GERGREV +FIE LG + LK+SVV+VATSD+ ++R L A TIAEYF Sbjct: 187 DVNVIALIGERGREVLDFIERDLGPEGLKRSVVIVATSDQPALIRIKGALIATTIAEYFR 246 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G NV+L++DS+TR+A + RE+ GE P RGY SVF+ LP+LLER G G+ Sbjct: 247 DRGLNVMLMMDSVTRYAMAQREVGLAVGEPPAMRGYTPSVFASLPKLLERAGTGPT--GS 304 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA +VLVDGD+ N+PIAD+VR ILDGHIVLNR++A +G +P +D LAS+SR+ Sbjct: 305 ITAFYTVLVDGDDMNEPIADAVRGILDGHIVLNRNIANKGHFPAIDVLASISRVMKDISP 364 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 ++ ++ L+ ++++ D+ IG Y+ G + +D+++ + I+DF KQ ++ ++ Sbjct: 365 EEQIDASENVKRLMAVYKDSEDLINIGAYQEGSNADIDESIEYIGRIWDFTKQKVNEKTT 424 Query: 427 EDVFQE 432 + QE Sbjct: 425 LNEVQE 430 >gi|319944165|ref|ZP_08018441.1| flagellar protein export ATPase FliI [Lautropia mirabilis ATCC 51599] gi|319742460|gb|EFV94871.1| flagellar protein export ATPase FliI [Lautropia mirabilis ATCC 51599] Length = 475 Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 145/325 (44%), Positives = 206/325 (63%), Gaps = 2/325 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A G+P+D L + S I + AM+R+ + + TG+R I+ + GQ Sbjct: 127 GRVVDADGRPMDRFGPL-RNVESRPIHGRAINAMDREPIREALDTGVRAINGLLTIGRGQ 185 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 RIG+FAG+G+GKS LL M AR D +++ LVGERGRE++EF+ED LG+ + ++V+V Sbjct: 186 RIGLFAGAGLGKSVLLGMMARYTNADVIVVGLVGERGREIKEFLEDILGEEDRHRAVIVA 245 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A SD PI R A IAEYF + NVLL++DS+TR+A + REIA + GE P +G Sbjct: 246 APSDLPPIARMQGAHYATAIAEYFRDQDMNVLLLMDSLTRYAMAAREIALSIGESPATKG 305 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LP LLER G + +G+ITA +VL +GD+ NDP+ADS RS LDGHIVL+R Sbjct: 306 YPPSVFARLPALLERTGMGARGQGSITAFYTVLAEGDDQNDPVADSSRSFLDGHIVLSRE 365 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G YP +D S+SR+ A++++L L L + +R++ IG Y G D Sbjct: 366 LADAGHYPAIDIEKSISRVMSAVTPAEQQQLARQLKSLWSAYRRSRELITIGAYTEGSDA 425 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426 +D+A+ +P+I FL Q D SS Sbjct: 426 RIDRAIELMPMIEAFLCQEVHDPSS 450 >gi|330502766|ref|YP_004379635.1| flagellum-specific ATP synthase [Pseudomonas mendocina NK-01] gi|328917052|gb|AEB57883.1| flagellum-specific ATP synthase [Pseudomonas mendocina NK-01] Length = 448 Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 148/362 (40%), Positives = 222/362 (61%), Gaps = 5/362 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + +Y+ PVG I+ G V R+ GRV++ G+ +DG + Sbjct: 68 EVMGFSAGKIYLMPVGSLAGIAPGARVVPLPDAGRLPMGMTMLGRVLDGAGRALDGKGGM 127 Query: 120 GKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 D + M+ S P +NR + + GIR I+ + GQR+G+FAG+G+GKS LL Sbjct: 128 KAEDWVPMDGPSINP--LNRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLL 185 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLT 237 M R + +++ L+GERGREV+EFI++ LG+ LK+SVVV + +D++P++R A Sbjct: 186 GMMTRFTEAEIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDAPLMRLRAAQY 245 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 IAEYF KG NVLL++DS+TR+A + REIA GE P +GYP SVF++LP+L+ER Sbjct: 246 CTRIAEYFRDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERA 305 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G +E G+ITA +VL +GD+ DPIAD+ R +LDGH VL+R LAEEG YP VD +S+ Sbjct: 306 GNAEAGGGSITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAVDIESSI 365 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + ++ K L R++++RD+ +G Y PG D D A+ + PI+ +L Sbjct: 366 SRVMPQVVPPEQLKQAQRFKQLWSRYQQSRDLISVGAYVPGGDADTDLAIARQPIMAQYL 425 Query: 418 KQ 419 +Q Sbjct: 426 RQ 427 >gi|119775429|ref|YP_928169.1| flagellum-specific ATP synthase [Shewanella amazonensis SB2B] gi|119767929|gb|ABM00500.1| Sodium-transporting two-sector ATPase [Shewanella amazonensis SB2B] Length = 446 Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 161/421 (38%), Positives = 238/421 (56%), Gaps = 5/421 (1%) Query: 5 LETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIR 64 L L QL + N V G + + V T+ +G + + +V+ Sbjct: 9 LNNLRQLRQSLPVNRPVAEGQLVRV--VGLTLEASGCRAPVGSLCAIDTMGGELIAEVVG 66 Query: 65 INLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGD 123 + D++Y+ P+ + + G V G + I GRV++ G+P+DG LG D Sbjct: 67 FDEDLLYLMPIEELKGVLPGARVRPLGEQTGIHVGMSLLGRVLDGGGEPLDGLGPLGTTD 126 Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 ++ + P + R+ + + GIR I+ + GQR+G+FAGSG+GKS LL M R Sbjct: 127 IAPRHGPAINP-LARRPIHEPLDVGIRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242 D +++ LVGERGREV+EFIE+ LG + +SVVV A +D SP++R A T+ IA Sbjct: 186 GTTADVIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETSTRIA 245 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 EYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LPRL+ER G Sbjct: 246 EYFRDLGFNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGP 305 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R+LA+ G YP +D AS+SR+A Sbjct: 306 GQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRTLADSGHYPAIDIEASISRVAP 365 Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422 S + + + +++ RD+ IG Y G D +D A+ P + FL+Q Sbjct: 366 MVISPAHLEAMRRVKQTYSLYQQNRDLISIGAYAAGSDPRIDNAIRLQPAMNAFLRQGMR 425 Query: 423 D 423 D Sbjct: 426 D 426 >gi|300854211|ref|YP_003779195.1| flagellum-specific ATP synthase [Clostridium ljungdahlii DSM 13528] gi|300434326|gb|ADK14093.1| flagellum-specific ATP synthase [Clostridium ljungdahlii DSM 13528] Length = 435 Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 163/392 (41%), Positives = 238/392 (60%), Gaps = 7/392 (1%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINA 108 ++ +NS +V+ N V + P+G IS G +V + S G+V++ Sbjct: 48 IYNEENSKISCEVVGFNESNVILMPLGELIGISPGCRVVPERMPLNVRCSDELFGKVLDG 107 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG P+DG + + + ++ P + R+R+ + TG+R ID F GQRIG+FA Sbjct: 108 LGNPLDG--AYISSGVPYPLDTEPPDPLKRRRITEVIATGVRAIDGFLTCGQGQRIGIFA 165 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 GSG+GKST L M A+ D +I+L+GERGREV++FIE LG+ +KKS++V ATSD+ Sbjct: 166 GSGVGKSTTLGMIAKYAEADVNVIALIGERGREVKDFIEKDLGEEGMKKSIIVCATSDKP 225 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 ++R TA IAEYF KG V+L++DS+TRFA + REI GE P +GY SVF Sbjct: 226 ALVRLKGAFTATAIAEYFRDKGKKVILMMDSVTRFAMAQREIGLAIGEPPATKGYTPSVF 285 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 ++LPRL+ER G S+ G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA + Sbjct: 286 AKLPRLMERAGTSDI--GSITAFYTVLVDGDDLNEPIADAVRGILDGHIVLSRTLANKNH 343 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YP +D LAS+SRL + +D KK S ++ ++ + D+ IG Y G +DKAV Sbjct: 344 YPAIDVLASISRLMSEIAESDHKKNASFARDMLSTYKNSEDLINIGAYVKGSSEKIDKAV 403 Query: 408 HQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 I +L+Q ++ SS E+ +++ K Q Sbjct: 404 ACYDKIIAYLRQDVNENSSFEESVEDLKKIFQ 435 >gi|50954407|ref|YP_061695.1| flagellum-like ATP synthase [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950889|gb|AAT88590.1| flagellum-like ATP synthase [Leifsonia xyli subsp. xyli str. CTCB07] Length = 441 Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 168/418 (40%), Positives = 242/418 (57%), Gaps = 20/418 (4%) Query: 12 AEDYSKNLVVQG----GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 A+ Y+ L V G ++S + TV L V GD V S Q++ + Sbjct: 8 ADRYAAALRVAAPERVGAVTSAVGLSLTVAGLRGAV--GDLVEIGEPGSVTHAQIVAVGP 65 Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-----WCGRVINALGKPIDGDDSLGKG 122 ++ + P+ S G RF + P GRVIN LG PIDG L Sbjct: 66 EMTCM-PMTPAAGHSTG----AGARFALRPPTVPTGRGLLGRVINGLGHPIDGKGPL-DA 119 Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 + + + VP ++R R++ G+R +D P+ GQR+G+FAGSG+GKS+LLSM A Sbjct: 120 TSCLPLDNAVPNPLDRARIDTPLPLGVRALDTLIPVGRGQRLGLFAGSGVGKSSLLSMIA 179 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241 R D +++L+GERGREVREF+ED LG D L +SVVVVATSDE ++R+ A A I Sbjct: 180 RGTDADVFVLALIGERGREVREFLEDDLGADGLARSVVVVATSDEPALMRRRAAFAATRI 239 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AE F G + +L++DS+TR A + REI ++GE P RGYP+S FS L LLER G ++ Sbjct: 240 AESFRDNGADAMLMMDSLTRVAMAQREIGLSAGEPPATRGYPSSTFSTLASLLERAGTAK 299 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 G+IT + +VLVDGD+HN+PIAD+ RSILDGH++L+R LA G +P +D L S+SRLA Sbjct: 300 T--GSITGLYTVLVDGDDHNEPIADAARSILDGHVLLDRKLAINGHFPSIDVLGSISRLA 357 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 K + ++ ++L ++ +D+ +G Y+PG + ++D V I FL+Q Sbjct: 358 GKICTPGQQAAATALRKVMAARRAAQDLLDVGAYKPGANPLVDAGVEHEDRIAAFLQQ 415 >gi|331645405|ref|ZP_08346509.1| flagellar protein export ATPase FliI [Escherichia coli M605] gi|331045567|gb|EGI17693.1| flagellar protein export ATPase FliI [Escherichia coli M605] Length = 446 Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 152/376 (40%), Positives = 222/376 (59%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQAKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ + ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTRLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMREPASLELVQ 430 >gi|219684590|ref|ZP_03539533.1| flagellar protein export ATPase FliI [Borrelia garinii PBr] gi|219671952|gb|EED29006.1| flagellar protein export ATPase FliI [Borrelia garinii PBr] Length = 436 Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 159/405 (39%), Positives = 245/405 (60%), Gaps = 9/405 (2%) Query: 36 VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93 V L +GD ++ Q N +V+ N V + I +G+ V+ + Sbjct: 32 VESLGPQCAVGDLCLIDQRNNKRVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 I+ S GRVI++LG+PID S K K+ P +NR E+ TG++V+D Sbjct: 92 EINLSDELLGRVIDSLGRPIDNKGSFLKNRYKELTFEKINP-INRSIFEEQILTGVKVLD 150 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 F P+ GQR+G+F+G+G+GKSTLL M A++ D +I+ +GERGRE+ EFIE LG+ Sbjct: 151 GFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 LKKSV+VV+TSDESPI R A IAEYF +G +V L+ DSITRFA++ RE++ + Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFRDQGKDVALLFDSITRFANAKREMSLS 270 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE PV++GYP SVF E+P LLER G + G++T +VLV+GD+ +P+AD+++++L Sbjct: 271 LGEPPVSKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHI+L+R L + G YP ++ L+S SR ++ S +++KL+ +L+ ++ D+ Sbjct: 330 DGHIILDRDLFDRGIYPSINILSSTSRSINRIMSLEKQKLIMKARNLLSIYKNYEDLIRT 389 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL----SSEDVFQEI 433 G Y G + +D A+ + P I DF+ Q +++ + ED +EI Sbjct: 390 GIYIKGSNKDVDFAISKYPKIIDFISQGINEIYDFENLEDEIREI 434 >gi|33593244|ref|NP_880888.1| type III secretion system ATPase [Bordetella pertussis Tohama I] gi|29603230|emb|CAC79575.1| bscN [Bordetella pertussis Tohama I] gi|33563619|emb|CAE42520.1| putative ATP synthase in type III secretion system [Bordetella pertussis Tohama I] gi|332382653|gb|AEE67500.1| type III secretion system ATPase [Bordetella pertussis CS] Length = 444 Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 157/410 (38%), Positives = 236/410 (57%), Gaps = 16/410 (3%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75 L ++G + + ++ V + + VCL + + G++ + G+V+ D + P+ Sbjct: 20 TLRIKGRVVQVVGTIIKAVVPMVKIGEVCL---LRNPGEDFEMHGEVVGFVRDAALLTPI 76 Query: 76 GIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME----IMS 130 G IS V GR + P GRV++ LG+P+D +S G L + + Sbjct: 77 GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDAAES---GPLHAHKFYPVFA 133 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 P + R+ + + G+RV+D GQR+G+FA +G GKSTLL M + D Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193 Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +++L+GERGREVREF+E LG + +KSV+V ATSD+S + R A A IAEYF +G Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VL ++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G ++ G+ITA Sbjct: 254 QRVLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQT--GSITA 311 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLV+GD+ N+P+AD RSILDGHIVL+R L YP VD LAS SR+ + S Sbjct: 312 LYTVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRH 371 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 K L + L+ ++++ + IG Y+ G D D+A+ ++ I FL+Q Sbjct: 372 KYLAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQ 421 >gi|260866402|ref|YP_003232804.1| putative lateral flagellum-specific ATP synthase [Escherichia coli O111:H- str. 11128] gi|257762758|dbj|BAI34253.1| predicted lateral flagellum-specific ATP synthase [Escherichia coli O111:H- str. 11128] gi|323178505|gb|EFZ64083.1| flagellum-specific ATP synthase [Escherichia coli 1180] Length = 445 Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 152/376 (40%), Positives = 222/376 (59%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++D +TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDFLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S + ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMREPASLELVQ 430 >gi|54294644|ref|YP_127059.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str. Lens] gi|53754476|emb|CAH15960.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str. Lens] Length = 449 Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 151/362 (41%), Positives = 225/362 (62%), Gaps = 3/362 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + VY+ +G + I+ G + GR +++ GR++N G ID D Sbjct: 63 EVVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVNVGHQLLGRILNGSGMFID-DGPP 121 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G+ + ++ +V + R +E GIR I+ + GQRIG+FAGSG+GKS LL Sbjct: 122 GEMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M R D V++ L+GERGREV+EFIE LG + LK++VVV A +DESP++R A Sbjct: 182 MMTRFTEADVVVVGLIGERGREVKEFIECNLGLEGLKRAVVVAAPADESPLMRLHGAKVA 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +IAEYF +G +VLL++DS+TRFA + REIA + GE P +GYP SVF++LP+L+ER G Sbjct: 242 TSIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D AS+S Sbjct: 302 NGTAGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASIS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S K + + +E+ +D+ L+G Y G D ++DKA+ V + D+L Sbjct: 362 RVMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLA 421 Query: 419 QS 420 Q Sbjct: 422 QG 423 >gi|209522226|ref|ZP_03270862.1| flagellar protein export ATPase FliI [Burkholderia sp. H160] gi|209497340|gb|EDZ97559.1| flagellar protein export ATPase FliI [Burkholderia sp. H160] Length = 546 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 142/318 (44%), Positives = 201/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A G+P+DG LG + + + V +NR+ + K G+R I+ + GQ Sbjct: 210 GRVLDASGRPLDGLGPLGT-QIDAPLSAPVINPLNREPIHKVLDVGVRAINSLLTVGRGQ 268 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVV+ Sbjct: 269 RMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVIA 328 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A + ++AEYF +G +VLL++DS+TR+A + REIA GE P +G Sbjct: 329 APADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKG 388 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+RS Sbjct: 389 YPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRS 448 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + ++ R++ RD+ +G Y G D Sbjct: 449 LAEAGHYPAIDIEASISRAMTALIDDNHLNKTRMFKQMLSRYQRNRDLINVGAYSSGRDA 508 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LD+A+ P + FL+Q Sbjct: 509 VLDRAIALYPRMEAFLQQ 526 >gi|325918314|ref|ZP_08180451.1| ATPase FliI/YscN family [Xanthomonas vesicatoria ATCC 35937] gi|325535454|gb|EGD07313.1| ATPase FliI/YscN family [Xanthomonas vesicatoria ATCC 35937] Length = 458 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 145/323 (44%), Positives = 207/323 (64%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + G+G +SM MS P + R+ + G+R I+ P+ G Sbjct: 119 GRVIDSDGTPLDGKGPIRGEGSVSMAGMSINP--LAREPITTSLDVGVRAINAMLPIGRG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD+ W + + L L+ + RD+ IG Y+ Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADEPW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D D+A+ + P I +FL Q Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ 435 >gi|313683644|ref|YP_004061382.1| ATPase, flii/yscn family [Sulfuricurvum kujiense DSM 16994] gi|313156504|gb|ADR35182.1| ATPase, FliI/YscN family [Sulfuricurvum kujiense DSM 16994] Length = 434 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 163/421 (38%), Positives = 238/421 (56%), Gaps = 18/421 (4%) Query: 29 ITSVYYTVTCLSQ--------YVCLGDFV--VHQGKNSDNLGQVIRINLDIVYICPVGIG 78 +T+V+ TV+ +S +V +GD V V + ++ LG V + + +I P Sbjct: 15 LTTVFGTVSKISPTVIVAEGLHVSIGDTVLMVSETSGAEALGMVSEVERNRFFITPFRFV 74 Query: 79 EEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAM 136 E GD V+ + I GRV++ PIDG + E + K P AM Sbjct: 75 EGFRAGDKVYPNQSGMMIEVGEALLGRVVDPFMNPIDGKGPIAGSHF--ESIIKAPIAAM 132 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R +++ F G++ ID GQ++G+FAGSG+GKSTL+ M R +++L+G Sbjct: 133 KRGMIDEPFSVGVKTIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVRGADAPIKVVALIG 192 Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 ERGREV EFIE LG NL+ +V+VVATSD+SP++RK +A+++AEYF KG +VL ++ Sbjct: 193 ERGREVPEFIEKSLGGNLENTVLVVATSDDSPLMRKYGAFSAMSVAEYFKGKGQDVLFMM 252 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TRFA + REI GE P ++GYP S + LP+L+ER G E+ G+ITA +VLV+ Sbjct: 253 DSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-KEEGSGSITAFFTVLVE 311 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 GD+ +DPIAD RSILDGHIVL+R L + G YPP+ L S SR+ + + + V Sbjct: 312 GDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPIHILNSASRVMNDIITPEHLAAVRRF 371 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436 L +E + IG Y G D LD+A+ + + FL Q +S +QE + Sbjct: 372 RRLYTLLKENEMLIRIGAYVRGTDRELDEAISKKEKMEAFLSQEAMSISG---YQESIDQ 428 Query: 437 L 437 L Sbjct: 429 L 429 >gi|107101129|ref|ZP_01365047.1| hypothetical protein PaerPA_01002161 [Pseudomonas aeruginosa PACS2] Length = 429 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 146/336 (43%), Positives = 209/336 (62%), Gaps = 4/336 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R++ G+V++ LG+P DG + + PP M+R+ +E+ G+R Sbjct: 83 GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPPPMSRRLIERPLSLGVR 141 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 ID GQR+G+FA +G GKSTLL+ R+ D +++LVGERGREVREFIE L Sbjct: 142 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 201 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ L++SV+VVATSD + R A A +IAEYF +G VLL++DS+TRFA + REI Sbjct: 202 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 261 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE P RGYP SVF+ LPRL+ER G SE+ G+ITA+ +VLV+GD+ ++P+AD R Sbjct: 262 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 319 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 SILDGHIVL+R LA YP +D L SVSR+ ++ D++ L + ++EE + Sbjct: 320 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 379 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 IG Y+ G D D+A+ ++ I +L+Q + S Sbjct: 380 LKIGEYQKGQDSEADRAIEKIAAIRQWLRQGTHETS 415 >gi|323703172|ref|ZP_08114825.1| flagellar protein export ATPase FliI [Desulfotomaculum nigrificans DSM 574] gi|323531831|gb|EGB21717.1| flagellar protein export ATPase FliI [Desulfotomaculum nigrificans DSM 574] Length = 443 Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 153/357 (42%), Positives = 216/357 (60%), Gaps = 5/357 (1%) Query: 72 ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 + P+G I G V GR + G+V++ LG+P++GD G+ + + + Sbjct: 74 LMPLGELRGIYPGSAVVPSGRTLTVKVGEHLRGKVLDGLGRPLEGDIHNGQAE-DFPVDN 132 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 + P + R+R++ TG+R +D GQRIG+FAGSG+GKSTLL M AR D Sbjct: 133 RPPNPLKRKRIDTVLPTGVRAVDALLTCGKGQRIGIFAGSGVGKSTLLGMIARHGGADVN 192 Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I L+GERGREV EF+E+ LG + + KS+VV ATSD+ ++R A IAEYF +G Sbjct: 193 VIGLIGERGREVLEFLEEDLGPEGMAKSIVVAATSDQPALVRLKGAFVATAIAEYFRDRG 252 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +V+L++DS+TRFA + RE+ GE P +GY SVF+ LP+LLER G + G+ITA Sbjct: 253 LDVMLMMDSVTRFAMAQREVGLAVGEPPATKGYTPSVFALLPKLLERSGMGQN--GSITA 310 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 +VLVDGD+ N+PIAD+VR ILDGHIVLNRSLA YP +D L SVSRL S + Sbjct: 311 FYTVLVDGDDLNEPIADAVRGILDGHIVLNRSLASRNHYPAIDVLQSVSRLMPDIVSEEH 370 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 K + L+ + + D+ IG Y G + +D A+ + I +FL+Q P + SS Sbjct: 371 KAQAGMVKDLLAAYLQAEDLINIGAYVKGSNPKIDAAIAKYDGIINFLRQQPGEFSS 427 >gi|254457549|ref|ZP_05070977.1| flagellum-specific ATP synthase [Campylobacterales bacterium GD 1] gi|207086341|gb|EDZ63625.1| flagellum-specific ATP synthase [Campylobacterales bacterium GD 1] Length = 438 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 161/424 (37%), Positives = 238/424 (56%), Gaps = 10/424 (2%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV--VHQGKNSDNLGQVIRINLDIVYIC 73 SKN V G + I + T LS V + D V + + +G V I+ +I Sbjct: 12 SKNYSVAFGEVIKINATIITAKGLS--VSISDMVKIISNSTAQETMGMVTEIDGATFFIT 69 Query: 74 PVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132 P E GD VF I GRV++ +PID ++ + M + K Sbjct: 70 PFSFVEGFCSGDRVFLDQTGMNIPVGQALLGRVVDPFMRPIDEKGTISS--IKMSPIIKA 127 Query: 133 P-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P AM R +++ F G++ ID GQ++G+FAGSG+GKSTL+ M + + Sbjct: 128 PIAAMKRGMIDEIFSVGVKSIDGLLTCGKGQKLGIFAGSGVGKSTLMGMIVKGSTAPIKV 187 Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 ++L+GERGREV EFIE LG +L+ +V++VATSD+SP++RK A+++AEYF +G + Sbjct: 188 VALIGERGREVPEFIEKNLGGDLENTVIIVATSDDSPLMRKYGAFAAMSVAEYFKDQGLD 247 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 VL I+DS+TRFA + REI GE P ++GYP S + LP+L+ER G E KG+ITA Sbjct: 248 VLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSSLTLLPQLMERAG-KEDGKGSITAFF 306 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++GD+ +DPIAD RSILDGHIVL+R L + G YPP+ L S SR+ + S + + Sbjct: 307 TVLIEGDDMSDPIADQSRSILDGHIVLSRELTDFGIYPPIHILNSASRVMNDIISKEHLQ 366 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS-DLSSEDVF 430 +V L +E + IG Y G D LD+A+++ + F+ Q + + +D Sbjct: 367 MVMKFRRLYTLLKENEMLIRIGAYVKGTDSELDEAMNKKEGMEKFMSQDANMQTNYQDTL 426 Query: 431 QEIT 434 E+T Sbjct: 427 DELT 430 >gi|219685772|ref|ZP_03540583.1| flagellar protein export ATPase FliI [Borrelia garinii Far04] gi|219672711|gb|EED29739.1| flagellar protein export ATPase FliI [Borrelia garinii Far04] Length = 436 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 159/405 (39%), Positives = 245/405 (60%), Gaps = 9/405 (2%) Query: 36 VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93 V L +GD ++ Q N +V+ N V + I +G+ V+ + Sbjct: 32 VESLGPQCAVGDLCLIDQRNNKRVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 I+ S GRVI++LG+PID S K K+ P +NR E+ TG++V+D Sbjct: 92 EINLSDELLGRVIDSLGRPIDNKGSFLKNRYKELTFEKINP-INRSIFEEQILTGVKVLD 150 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 F P+ GQR+G+F+G+G+GKSTLL M A++ D +I+ +GERGRE+ EFIE LG+ Sbjct: 151 GFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 LKKSV+VV+TSDESPI R A IAEYF +G +V L+ DSITRFA++ RE++ + Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFRDQGKDVALLFDSITRFANAKREMSLS 270 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE PV++GYP SVF E+P LLER G + G++T +VLV+GD+ +P+AD+++++L Sbjct: 271 LGEPPVSKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHI+L+R L + G YP ++ L+S SR ++ S +++KL+ +L+ ++ D+ Sbjct: 330 DGHIILDRDLFDRGIYPSINILSSTSRSINRIMSLEKQKLIMKARNLLSIYKNYEDLIRA 389 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL----SSEDVFQEI 433 G Y G + +D A+ + P I DF+ Q +++ + ED +EI Sbjct: 390 GIYIKGSNKDVDFAISKYPKIIDFISQGINEIFDFENLEDEIREI 434 >gi|224531735|ref|ZP_03672367.1| flagellar protein export ATPase FliI [Borrelia valaisiana VS116] gi|224511200|gb|EEF81606.1| flagellar protein export ATPase FliI [Borrelia valaisiana VS116] Length = 436 Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 154/387 (39%), Positives = 236/387 (60%), Gaps = 5/387 (1%) Query: 36 VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93 V L +GD ++ Q N +V+ N V + I +G+ V+ + Sbjct: 32 VESLGPQCAVGDLCLIDQRNNKKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 I+ S GRVI++LG+PID + I K+ P +NR E+ TG++V+D Sbjct: 92 EINLSDELLGRVIDSLGRPIDNKGAFLNNRYKELIFEKINP-INRSIFEEQILTGVKVLD 150 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 F P+ GQR+G+F+G+G+GKSTLL+M A++ D +I+ +GERGRE+ EFIE LG+ Sbjct: 151 GFLPVAKGQRVGIFSGAGVGKSTLLAMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 LKKSV+VV+TSDESPI R A IAEYF +G +V L+ DSITRFA++ RE++ + Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLS 270 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE PVA+GYP SVF E+P LLER G + G++T +VLV+GD+ +P+ D+++++L Sbjct: 271 LGEPPVAKGYPPSVFFEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVVDNIKAVL 329 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHI+L+R L + G YP ++ L+S SR + S +++KL+ +L+ +++ D+ Sbjct: 330 DGHIILDRDLFDRGIYPSINVLSSTSRSVHRIMSLEKQKLIMKARNLLSVYKDYEDLVRT 389 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419 G Y G + +D A+ + P I DF+ Q Sbjct: 390 GIYLKGSNKDVDFAISKYPKIIDFISQ 416 >gi|302874592|ref|YP_003843225.1| type III secretion apparatus H+-transporting two-sector ATPase [Clostridium cellulovorans 743B] gi|307690797|ref|ZP_07633243.1| type III secretion apparatus H+-transporting two-sector ATPase [Clostridium cellulovorans 743B] gi|302577449|gb|ADL51461.1| type III secretion apparatus H+-transporting two-sector ATPase [Clostridium cellulovorans 743B] Length = 435 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 161/399 (40%), Positives = 241/399 (60%), Gaps = 11/399 (2%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACW 101 VCL ++ + + +V+ D + + P+G I+ G V G ++ S Sbjct: 45 VCL----IYNTQGKEIHCEVVGFKSDDIILMPLGELVGIAPGCRVVATGIPLSVNCSYDL 100 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 G++I+ LG+P+D S+ +G++ + + P + R+R+++ TG+R ID F G Sbjct: 101 LGKIIDGLGRPLD-KSSIPQGEM-YPLDTNPPDPLKRRRIKEILPTGVRAIDGFLTCGEG 158 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 QR+G+FAGSG+GKSTLL M AR D +I+L+GERGREV +FIE LG+ +K+S+VV Sbjct: 159 QRVGIFAGSGVGKSTLLGMIAREAQADINVIALIGERGREVLDFIEKDLGEEGMKRSIVV 218 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 ATSD+ ++R TA IAEYF +G V+L++DS+TRFA + RE+ GE P + Sbjct: 219 CATSDQPALVRLKGAFTATAIAEYFRDQGKKVILMMDSVTRFAMAQREVGLAVGEPPATK 278 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GY SVF+ LP+L+ER G SEK G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R Sbjct: 279 GYTPSVFAMLPKLMERSGMSEK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSR 336 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LA + +P +D L+S+SRL + + KK S L+ ++ + D+ IG Y G + Sbjct: 337 ALAAQNHFPAIDVLSSISRLMSEIAEEEHKKSASLARDLLATYKNSEDLINIGAYVSGSN 396 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 +D A+ I FLKQ + S+ ED + K + Sbjct: 397 KKIDMAIFHNEKINLFLKQQVKEKSAFEDSIDNLKKMFK 435 >gi|28898442|ref|NP_798047.1| type III secretion system ATPase [Vibrio parahaemolyticus RIMD 2210633] gi|260365114|ref|ZP_05777685.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio parahaemolyticus K5030] gi|260876603|ref|ZP_05888958.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio parahaemolyticus AN-5034] gi|260895036|ref|ZP_05903532.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio parahaemolyticus Peru-466] gi|28806659|dbj|BAC59931.1| ATP synthase in type III secretion system [Vibrio parahaemolyticus RIMD 2210633] gi|308085935|gb|EFO35630.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio parahaemolyticus Peru-466] gi|308093577|gb|EFO43272.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio parahaemolyticus AN-5034] gi|308111730|gb|EFO49270.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio parahaemolyticus K5030] Length = 440 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 152/357 (42%), Positives = 213/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G++++ LG+P DG S + + Sbjct: 88 VSPMGKMHEVGVGDHLL--------------GKILDGLGRPFDGAQSQ-EPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG D + +SV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ D + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPDHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + L ++ ++EE + IG Y+ G D D A+ Q I FL+Q PSDL Sbjct: 371 AYAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPSDL 427 >gi|194292003|ref|YP_002007910.1| sctn: non flagellar t3S system conserved protein. atpase alpha/beta chains family [Cupriavidus taiwanensis LMG 19424] gi|193225907|emb|CAQ71854.1| SctN: non flagellar T3S system conserved protein. ATPase alpha/beta chains family [Cupriavidus taiwanensis LMG 19424] Length = 460 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 172/416 (41%), Positives = 241/416 (57%), Gaps = 16/416 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS- 82 G + + T + V L Q V G+ + L +V+ + P+G +S Sbjct: 42 GMLINATGIQAHVGELCQLVTPGEPPL--------LAEVVGFVQQTALLTPLGRTTGVSA 93 Query: 83 LGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 L +++ + A GRV++ALG+PIDG +L G + + ++ P + R+ + Sbjct: 94 LTEVIPSAHGHQCPAGAALLGRVLDALGEPIDGKGAL-DGVARVPVDNEPPDPLTRRLIR 152 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + TG+R ID L GQR+G+FA G+GKSTLL M AR D +++LVGERGREV Sbjct: 153 EPLATGVRAIDGLLTLGEGQRVGIFAPPGVGKSTLLGMLARGASSDVNVVALVGERGREV 212 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 REFIE LG D + ++V+VV+TSD SP+ R TA IAE+F +G VLL++DS+TR Sbjct: 213 REFIEYNLGSDGMARTVLVVSTSDRSPMERVRCAYTATAIAEHFRDQGRRVLLLVDSLTR 272 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 A + REI SGE P R YP SVFS LP+LLER G +G+ITA +VL +G++ + Sbjct: 273 LARAQREIGLASGEPPTRRSYPPSVFSMLPQLLERAG--TGVQGSITAAYTVLTEGEDDS 330 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 DPIA+ VRSILDGHIVL+R LA G+YPPVD L SVSR+ + + + + L L+ Sbjct: 331 DPIAEEVRSILDGHIVLSRKLASAGQYPPVDVLQSVSRVMPQVVAGAHARDAARLRQLLA 390 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 R++E + IG YRPG D + D AV +P I +L Q + L D F KL Sbjct: 391 RYQELELLLQIGEYRPGADPVADAAVAAMPDIRAYLAQPAARL---DTFAGAVDKL 443 >gi|254176456|ref|ZP_04883114.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei ATCC 10399] gi|160697498|gb|EDP87468.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei ATCC 10399] Length = 442 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 168/431 (38%), Positives = 245/431 (56%), Gaps = 10/431 (2%) Query: 5 LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59 L L+++A+ + L ++ G + V T V + LG+ +G + + Sbjct: 4 LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG Sbjct: 64 AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFAH+ REI +GE P RG+P SVF+ELPRLLER Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFAHAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+ Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420 Query: 418 KQSPSDLSSED 428 Q + S D Sbjct: 421 NQRTDEYSPPD 431 >gi|255021376|ref|ZP_05293424.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC 51756] gi|254969239|gb|EET26753.1| Flagellum-specific ATP synthase FliI [Acidithiobacillus caldus ATCC 51756] Length = 460 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 148/330 (44%), Positives = 209/330 (63%), Gaps = 2/330 (0%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G + S S GRVI+ LG+P+DG D++ + +M MNR + G+R Sbjct: 101 GEAQGSASPALLGRVIDGLGQPLDGGDAV-PNRTPIPLMGTPLNPMNRMPIRHPLDVGVR 159 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 I+ + G R+G+FAGSG+GKS LL M AR+ D +++ L+GERGREV+EFIED L Sbjct: 160 SINALFTVGRGARMGLFAGSGVGKSVLLGMMARNTEADVIVVGLIGERGREVKEFIEDIL 219 Query: 211 GD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ L+++VVV A +D + R A +AEYF +G +VLL++DS+TR+A + REI Sbjct: 220 GEAGLRRAVVVAAPADAPALTRIRGAHLATALAEYFRDRGQHVLLLMDSLTRYAMAQREI 279 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 A GE P RGYP SVF+ LP L+ER G ++ G+ITA +VL++GD+ DPIADS R Sbjct: 280 ALAVGEPPAVRGYPPSVFARLPALVERAGNGGRDGGSITAFYTVLMEGDDQQDPIADSAR 339 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 +ILDGH+VL+RSLAE+G YP +D AS+SR+ A + + + L L R+ E RD+ Sbjct: 340 AILDGHLVLSRSLAEQGHYPAIDLEASISRVMPNIVPAAQLQALHRLKRLYGRYREQRDL 399 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +G Y G+D +LD+AV P I FL+Q Sbjct: 400 IAVGAYSAGLDPVLDQAVQAYPAIEAFLQQ 429 >gi|255507276|ref|ZP_05382915.1| type III secretion system ATPase [Chlamydia trachomatis D(s)2923] Length = 442 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 156/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118 +V+ + V++ P+G +S V G I GRV+N LG PID + Sbjct: 61 EVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKG 120 Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L D I P ++R ++ TG+R ID + GQRIG+FAG+G+GKS+L Sbjct: 121 PLENVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAEGQRIGIFAGAGVGKSSL 180 Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 L M AR ++ D +I+L+GERGREVREFIE+ LG+ +K+SV+VV+TSD+S LR A Sbjct: 181 LGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LP+LLE Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLE 300 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S +KG ITA +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+ YP +D LA Sbjct: 301 RAGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SRL ++++++ ++ +++ + IG YR G D +D A+ + + Sbjct: 359 SISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418 Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438 FLKQ D+ + ++E ++L+ Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438 >gi|74055037|gb|AAZ95842.1| FliI [Aeromonas hydrophila] Length = 443 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 140/320 (43%), Positives = 202/320 (63%), Gaps = 2/320 (0%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ +G+P+DG + ++ P ++R+ + + G+R I+ + Sbjct: 101 LLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIHQPMDVGVRAINAVLTVGQ 159 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219 GQR+G+FAGSG+GKS LL M R D V++ L+GERGREV+EFIED LG+ + +SVV Sbjct: 160 GQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVKEFIEDILGEEGRARSVV 219 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R TA+ IAEYF +G NVLL++DS+TR+A + REIA GE P Sbjct: 220 VAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRYAQAQREIALAVGEPPAT 279 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+ Sbjct: 280 KGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 339 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA+ G YP +D S+SR+ S +L +L +++ RD+ IG Y G Sbjct: 340 RELADAGHYPAIDIEKSISRVMPMVTSPQHMELARTLKQFYSLYQQNRDLITIGAYSQGS 399 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D +D+A+ Q P + FL+Q Sbjct: 400 DPRIDRAIVQKPYLDQFLQQ 419 >gi|206890201|ref|YP_002248118.1| flagellar protein export ATPase FliI [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742139|gb|ACI21196.1| flagellar protein export ATPase FliI [Thermodesulfovibrio yellowstonii DSM 11347] Length = 437 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 154/336 (45%), Positives = 206/336 (61%), Gaps = 6/336 (1%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+I+ G PIDG SL KG I +V + R+ +++ GIR I+ G Sbjct: 102 LGRIIDGTGNPIDGGVSL-KGK-PFPIYKEVINPLEREIIKEPLDLGIRAINALITCGKG 159 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221 Q+IG+ AGSG+GKS LL M AR D +I+L+GERGREVREFIE+ L D LKKSVVVV Sbjct: 160 QKIGIMAGSGVGKSVLLGMIARYTSADINVIALIGERGREVREFIENDLADGLKKSVVVV 219 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +TSD + R A IAEYF +G +VLL++DS+TRFA + REI +GE P +G Sbjct: 220 STSDAPALARIRGAFLATAIAEYFREQGKHVLLLMDSLTRFAMAQREIGLAAGEPPTMKG 279 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ +P+LLER+G K G+IT + +VLV+GD+ DP+AD+ R+ILDGHIVL+R Sbjct: 280 YPPSVFNLMPKLLERVGVI-KNGGSITGIYTVLVEGDDLTDPVADASRAILDGHIVLSRE 338 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA YP +DPL S+SRL K L +I + DI IG Y+ G + Sbjct: 339 LANRNHYPAIDPLKSISRLMKDIVDDKHLKYAGRLLDIIATYARYEDIINIGAYKEGTNA 398 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 +D A+ + I FLKQ D+S + F+E +KL Sbjct: 399 QVDFAIKMMDKINSFLKQ---DISEKADFKESLQKL 431 >gi|51598548|ref|YP_072736.1| flagellum-specific ATP synthase [Borrelia garinii PBi] gi|51573119|gb|AAU07144.1| flagellum-specific ATP synthase [Borrelia garinii PBi] Length = 436 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 158/405 (39%), Positives = 245/405 (60%), Gaps = 9/405 (2%) Query: 36 VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93 V L GD ++ Q N +V+ N V + I +G+ V+ + Sbjct: 32 VESLGPQCAFGDLCLIDQRNNKKVFAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 I+ S GRVI++LG+PID S K K+ P +NR E+ TG++V+D Sbjct: 92 EINLSDELLGRVIDSLGRPIDNKGSFLKNRYKELTFEKINP-INRSIFEEQILTGVKVLD 150 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 F P+ GQR+G+F+G+G+GKSTLL M A++ D +I+ +GERGRE+ EFIE LG+ Sbjct: 151 GFLPVEKGQRVGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 LKKSV+VV+TSDESPI R A IAEYF +G +V L+ DSITRFA++ RE++ + Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFRDQGKDVALLFDSITRFANAKREMSLS 270 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE PV++GYP SVF E+P LLER G + G++T +VLV+GD+ +P+AD+++++L Sbjct: 271 LGEPPVSKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHI+L+R L + G YP ++ L+S SR ++ + +++KL+ +L+ +++ D+ Sbjct: 330 DGHIILDRDLFDRGIYPSINILSSTSRSINRIMNLEKQKLIMKARNLLSIYKDYEDLIRT 389 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL----SSEDVFQEI 433 G Y G + +D A+ + P I DF+ Q +++ + ED +EI Sbjct: 390 GIYIKGSNKDVDFAISKYPKIIDFISQGINEIFDFENLEDEIREI 434 >gi|218249447|ref|YP_002374811.1| flagellar protein export ATPase FliI [Borrelia burgdorferi ZS7] gi|226321606|ref|ZP_03797132.1| flagellar protein export ATPase FliI [Borrelia burgdorferi Bol26] gi|218164635|gb|ACK74696.1| flagellar protein export ATPase FliI [Borrelia burgdorferi ZS7] gi|226232795|gb|EEH31548.1| flagellar protein export ATPase FliI [Borrelia burgdorferi Bol26] Length = 436 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 155/387 (40%), Positives = 235/387 (60%), Gaps = 5/387 (1%) Query: 36 VTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93 V L +GD + +N + +V+ N V + I +G+ V+ + Sbjct: 32 VESLGPQCAIGDLCLIDQRNGKKVCAEVLGFNGPYVSLMAYEGFNGIEVGNKVYSLNKGL 91 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 I+ S GRVI++LG+PID S I K+ P +NR E TG++V+D Sbjct: 92 EINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINP-INRSIFEDQILTGVKVLD 150 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 F P+ GQR+G+F+GSG+GKSTLL M A++ D +I+ +GERGRE+ EFIE LG+ Sbjct: 151 GFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 LKKSV+VV+TSDESPI R A IAEYF +G +V L+ DSITRFA++ RE++ + Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDSITRFANAKREMSLS 270 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE PVA+GYP SVF E+P LLER G + G++T +VLV+GD+ +P+AD+++++L Sbjct: 271 LGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFTEPVADNIKAVL 329 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHI+L+R L + G YP ++ L+S SR + S +++KL+ +L+ +++ D+ Sbjct: 330 DGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARNLLSIYKDYEDLIRT 389 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419 G Y G + +D A+ + P I +F+ Q Sbjct: 390 GIYLKGSNKDVDFAISKYPKIINFISQ 416 >gi|77457766|ref|YP_347271.1| flagellum-specific ATP synthase [Pseudomonas fluorescens Pf0-1] gi|77381769|gb|ABA73282.1| flagellum-specific ATP synthase [Pseudomonas fluorescens Pf0-1] Length = 452 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 149/356 (41%), Positives = 215/356 (60%), Gaps = 3/356 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+ +DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P +NR + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LNRDPISVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF++LP+L+ER G +EK G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEKGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ + Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVAP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 + + L R++++RD+ +G Y G D D A++ P + +L+Q +D Sbjct: 376 EHMQRAQYFKQLWSRYQQSRDLISVGAYVAGGDRETDLAINLQPQLVRYLRQGLND 431 >gi|15605402|ref|NP_220188.1| type III secretion system ATPase [Chlamydia trachomatis D/UW-3/CX] gi|166154886|ref|YP_001653141.1| type III secretion system ATPase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|255311495|ref|ZP_05354065.1| type III secretion system ATPase [Chlamydia trachomatis 6276] gi|255317797|ref|ZP_05359043.1| type III secretion system ATPase [Chlamydia trachomatis 6276s] gi|255349058|ref|ZP_05381065.1| type III secretion system ATPase [Chlamydia trachomatis 70] gi|255503596|ref|ZP_05381986.1| type III secretion system ATPase [Chlamydia trachomatis 70s] gi|3329120|gb|AAC68264.1| Yops secretion ATPase [Chlamydia trachomatis D/UW-3/CX] gi|165930874|emb|CAP06436.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|289525713|emb|CBJ15194.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis Sweden2] gi|296435283|gb|ADH17461.1| type III secretion system ATPase [Chlamydia trachomatis E/150] gi|296436210|gb|ADH18384.1| type III secretion system ATPase [Chlamydia trachomatis G/9768] gi|296437138|gb|ADH19308.1| type III secretion system ATPase [Chlamydia trachomatis G/11222] gi|296438070|gb|ADH20231.1| type III secretion system ATPase [Chlamydia trachomatis G/11074] gi|296439001|gb|ADH21154.1| type III secretion system ATPase [Chlamydia trachomatis E/11023] gi|297140571|gb|ADH97329.1| type III secretion system ATPase [Chlamydia trachomatis G/9301] gi|297748800|gb|ADI51346.1| SctN [Chlamydia trachomatis D-EC] gi|297749680|gb|ADI52358.1| SctN [Chlamydia trachomatis D-LC] Length = 442 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 156/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118 +V+ + V++ P+G +S V G I GRV+N LG PID + Sbjct: 61 EVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKG 120 Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L D I P ++R ++ TG+R ID + GQRIG+FAG+G+GKS+L Sbjct: 121 PLENVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSSL 180 Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 L M AR ++ D +I+L+GERGREVREFIE+ LG+ +K+SV+VV+TSD+S LR A Sbjct: 181 LGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LP+LLE Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLE 300 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S +KG ITA +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+ YP +D LA Sbjct: 301 RAGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SRL ++++++ ++ +++ + IG YR G D +D A+ + + Sbjct: 359 SISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418 Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438 FLKQ D+ + ++E ++L+ Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438 >gi|90021830|ref|YP_527657.1| flagellum-specific ATP synthase [Saccharophagus degradans 2-40] gi|89951430|gb|ABD81445.1| ATPase FliI/YscN [Saccharophagus degradans 2-40] Length = 458 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 152/380 (40%), Positives = 227/380 (59%), Gaps = 7/380 (1%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVIN 107 V+ KN D +V+ N D Y+ PV E + G V + ++ GR+IN Sbjct: 58 VLPHNKNID--AEVVGFNGDKTYLMPVQKVEGLQPGARVVPLDAHQHMAIGEHLRGRIIN 115 Query: 108 ALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 +G+P+DG L GK ++ M + P ++R ++ G+R I+ + GQRIG+ Sbjct: 116 GIGQPLDGKGPLPGKSNVDMAPSAINP--LSRHPIDAPLDVGVRAINGLLTVGRGQRIGL 173 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSD 225 FAGSG+GKS LL M R D V++ L+GERGREV+EFI+ LGD + ++VV+ + +D Sbjct: 174 FAGSGVGKSVLLGMMTRFTTADIVVVGLIGERGREVKEFIDQILGDAGMSRAVVIASPAD 233 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 ++P++R A +AE+F +G N LL++DS+TR+A + REI+ GE P +GYP S Sbjct: 234 DAPLMRLRAAELCTRVAEFFRDQGLNCLLLMDSLTRYAQAQREISLAIGEPPATKGYPPS 293 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VFS++P L+ER G ++K G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R LAEE Sbjct: 294 VFSKIPELVERAGNADKGGGSITAFYTVLTEGDDLQDPIADSARAILDGHIVLSRDLAEE 353 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 G YP +D ASVSR+ + D + L+ R+ +D+ IG Y PG D +D Sbjct: 354 GIYPAIDISASVSRVMPSIVTPDHLQKAQKFKALLSRYRANKDLISIGAYTPGTDPNIDG 413 Query: 406 AVHQVPIIYDFLKQSPSDLS 425 A+ + P + ++ Q + S Sbjct: 414 AIERYPHLNKYICQGMKEAS 433 >gi|237750216|ref|ZP_04580696.1| flagellum-specific ATP synthase [Helicobacter bilis ATCC 43879] gi|229374110|gb|EEO24501.1| flagellum-specific ATP synthase [Helicobacter bilis ATCC 43879] Length = 455 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 171/440 (38%), Positives = 250/440 (56%), Gaps = 16/440 (3%) Query: 3 KNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQ 61 +NL+ L + S N G I S+ + LS V GD V + +G ++ G Sbjct: 20 ENLKQKLSLTTNLSPNF----GEIISVETNIIKAVGLSPSV--GDVVWLIRGNDTRTEGI 73 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120 VI + ++ I P E GD V I GRVIN LG P+D SLG Sbjct: 74 VIATHKEVFSISPFSFTEGFKSGDRVMIAKEGLNIPVGDELLGRVINPLGVPLD---SLG 130 Query: 121 K--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 I++ A+ R +++ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 131 ALYASACTPIINAPISALKRGLIDEVFSVGVKSIDSLLTCGKGQKMGIFAGSGVGKSTLM 190 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M + +++L+GERGREV EFIE LG NL+ +V+VVATSD+SP++RK +A Sbjct: 191 GMIVKGSAAQIKVVALIGERGREVPEFIEKNLGGNLENTVLVVATSDDSPLMRKYGAFSA 250 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 + IAE+F KG +VL I+DS+TRFA + REI GE P ++GYP SV + LP+L+ER G Sbjct: 251 MAIAEFFKDKGHDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLTLLPQLMERAG 310 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+ KG+ITA +VL++GD+ NDPIAD RSILDGHI+L+R+L + G YPP++ L S S Sbjct: 311 -KEEGKGSITAFFTVLMEGDDLNDPIADQSRSILDGHIMLDRNLTDFGIYPPINILNSSS 369 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S + K + +E + IG Y G D+ LD+A+ + ++ +FL Sbjct: 370 RVMHDIISQEHKNAARKFRRMQALLKENEVLIRIGSYHKGNDVELDEAIDKKALMEEFLG 429 Query: 419 QSPSDLSSEDVFQEITKKLQ 438 Q + SS + + IT+ ++ Sbjct: 430 QDENIQSSYE--ESITQMIE 447 >gi|260779314|ref|ZP_05888206.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC BAA-450] gi|260605478|gb|EEX31773.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC BAA-450] Length = 448 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 152/382 (39%), Positives = 226/382 (59%), Gaps = 7/382 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + I Y+ P+ +G + ++ G + S W GRV+N LG+ +D Sbjct: 66 AQVVGFDHTIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSENWMGRVVNGLGEALDDGPV 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LQGGDRVSLEPKPINP--LKRRPVDSPLNVGVRAINGLLTVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 + M ++ D +++ L+GERGREVREFIE L + K++++ A +DESP++R A L Sbjct: 184 MGMITQNTEADVIVVGLIGERGREVREFIESNLTPEARDKAIIIAAPADESPLMRLRAML 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AEYF KG +VLL++DS+TR+A + REIA + GE P RGYP SVF+ LP+LLER Sbjct: 244 LCHRVAEYFRDKGKDVLLMVDSLTRYAMAQREIALSLGEPPATRGYPPSVFNALPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE G++TA+ ++L GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D AS Sbjct: 304 AGNSENPNGSLTAIYTILAAGDDQQDPVVDSARAILDGHVVLSRKLAEQGHYPAIDVNAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR L + + + +D+ +GGY+PG D LD++V P + + Sbjct: 364 VSRCMTACSQPAHLTLANEFRKTYSNYLQVKDLLPLGGYQPGQDPELDRSVALYPQLTAY 423 Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438 L+Q+ S D Q +T+ Q Sbjct: 424 LQQAAD--CSVDFPQSLTELAQ 443 >gi|312884802|ref|ZP_07744494.1| flagellum-specific ATP synthase FliI [Vibrio caribbenthicus ATCC BAA-2122] gi|309367454|gb|EFP95014.1| flagellum-specific ATP synthase FliI [Vibrio caribbenthicus ATCC BAA-2122] Length = 447 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 149/363 (41%), Positives = 222/363 (61%), Gaps = 5/363 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + +I Y+ P+ +G + ++ G + S W GRV++ LG P+D D Sbjct: 66 AQVVGFDHNIAYLMPIRRLGGLFAGAKVIPLDGDSTVQLSDKWLGRVLDGLGHPLDDDGK 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + G+ +S+E P + R+ V+ GI+ I+ + GQRIG+ AGSG+GKS L Sbjct: 126 IIGGERVSLEPRRINP--LKRRPVDTPLNVGIKAINGLITVGKGQRIGLMAGSGVGKSIL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M ++ D +++ L+GERGREVREFIE L + K+V++ A +DESP++R A L Sbjct: 184 LGMMCKNTEADVIVVGLIGERGREVREFIEKNLTPEARAKAVIIAAPADESPLMRLKATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AEYF KG +VLL++DS+TR+A + REIA + GE P RGYP SVF+ LP+LLER Sbjct: 244 LCHRVAEYFRDKGKDVLLMMDSLTRYAMAQREIALSLGEPPATRGYPPSVFNILPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G +E +G++TA+ ++L D+ DP+ DS R+ILDGHIVL+R LAE+G YP +D AS Sbjct: 304 AGNAENPQGSLTAIYTILAVSDDQQDPVVDSARAILDGHIVLSRHLAEQGHYPAIDINAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR L S + + +D+ +GGY+PG D LD++V PI+ ++ Sbjct: 364 ISRCMGTCVETAHLTLASEFRRHYSAYLQVKDLIPLGGYQPGQDPELDRSVGLYPILSEY 423 Query: 417 LKQ 419 LKQ Sbjct: 424 LKQ 426 >gi|76789409|ref|YP_328495.1| type III secretion system ATPase [Chlamydia trachomatis A/HAR-13] gi|237803099|ref|YP_002888293.1| type III secretion system ATPase [Chlamydia trachomatis B/Jali20/OT] gi|237805020|ref|YP_002889174.1| type III secretion system ATPase [Chlamydia trachomatis B/TZ1A828/OT] gi|76167939|gb|AAX50947.1| SctN [Chlamydia trachomatis A/HAR-13] gi|231273320|emb|CAX10235.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis B/TZ1A828/OT] gi|231274333|emb|CAX11128.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis B/Jali20/OT] Length = 442 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 156/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118 +V+ + V++ P+G +S V G I GRV+N LG PID + Sbjct: 61 EVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKG 120 Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L D I P ++R ++ TG+R ID + GQRIG+FAG+G+GKS+L Sbjct: 121 PLESVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSSL 180 Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 L M AR ++ D +I+L+GERGREVREFIE+ LG+ +K+SV+VV+TSD+S LR A Sbjct: 181 LGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LP+LLE Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLE 300 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S +KG ITA +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+ YP +D LA Sbjct: 301 RAGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SRL ++++++ ++ +++ + IG YR G D +D A+ + + Sbjct: 359 SISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418 Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438 FLKQ D+ + ++E ++L+ Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438 >gi|15594633|ref|NP_212422.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi B31] gi|221217707|ref|ZP_03589175.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 72a] gi|223888865|ref|ZP_03623456.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 64b] gi|224533156|ref|ZP_03673756.1| flagellar protein export ATPase FliI [Borrelia burgdorferi WI91-23] gi|224533724|ref|ZP_03674312.1| flagellar protein export ATPase FliI [Borrelia burgdorferi CA-11.2a] gi|225549175|ref|ZP_03770150.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 94a] gi|225550200|ref|ZP_03771160.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 118a] gi|226320589|ref|ZP_03796149.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 29805] gi|1706850|sp|P52607|FLII_BORBU RecName: Full=Flagellum-specific ATP synthase gi|1165272|gb|AAA85611.1| FliI [Borrelia burgdorferi] gi|2688178|gb|AAC66660.1| flagellum-specific ATP synthase (fliI) [Borrelia burgdorferi B31] gi|221192384|gb|EEE18603.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 72a] gi|223885681|gb|EEF56780.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 64b] gi|224511883|gb|EEF82284.1| flagellar protein export ATPase FliI [Borrelia burgdorferi WI91-23] gi|224513017|gb|EEF83380.1| flagellar protein export ATPase FliI [Borrelia burgdorferi CA-11.2a] gi|225369312|gb|EEG98765.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 118a] gi|225370401|gb|EEG99839.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 94a] gi|226234008|gb|EEH32729.1| flagellar protein export ATPase FliI [Borrelia burgdorferi 29805] gi|312147904|gb|ADQ30563.1| flagellar protein export ATPase FliI [Borrelia burgdorferi JD1] gi|312148976|gb|ADQ29047.1| flagellar protein export ATPase FliI [Borrelia burgdorferi N40] Length = 436 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 147/341 (43%), Positives = 220/341 (64%), Gaps = 4/341 (1%) Query: 81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 I +G+ V+ + I+ S GRVI++LG+PID S I K+ P +NR Sbjct: 78 IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINP-INRS 136 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 E TG++V+D F P+ GQR+G+F+GSG+GKSTLL M A++ D +I+ +GERG Sbjct: 137 IFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERG 196 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 RE+ EFIE LG+ LKKSV+VV+TSDESPI R A IAEYF +G +V L+ DS Sbjct: 197 RELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVALLFDS 256 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 ITRFA++ RE++ + GE PVA+GYP SVF E+P LLER G + G++T +VLV+GD Sbjct: 257 ITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGD 315 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + +P+AD+++++LDGHI+L+R L + G YP ++ L+S SR + S +++KL+ + Sbjct: 316 DFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARN 375 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L+ +++ D+ G Y G + +D A+ + P I +F+ Q Sbjct: 376 LLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQ 416 >gi|254255070|ref|ZP_04948387.1| Flagellar biosynthesis/type III secretory pathway ATPase [Burkholderia dolosa AUO158] gi|124899715|gb|EAY71558.1| Flagellar biosynthesis/type III secretory pathway ATPase [Burkholderia dolosa AUO158] Length = 476 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 148/358 (41%), Positives = 213/358 (59%), Gaps = 17/358 (4%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P G G ++++G A W GR+++ +G+P DG L GD +++ Sbjct: 124 VMPAGAGRQLTIG--------------AAWRGRIVDGMGEPFDGGGPL-TGDAPLDLRPP 168 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 M ++ V G+R I+ + GQR+G+FAGSG+GKS LL M R D V+ Sbjct: 169 RINPMKKRPVAGVLDVGVRAINGMLTIGRGQRVGLFAGSGVGKSVLLGMITRQTAADVVV 228 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 + L+GERGREVREF+E LG D ++K++VVVA +DESP++R MA IA +F +GD Sbjct: 229 VGLIGERGREVREFVEHALGPDGMRKAIVVVAPADESPLMRLMATELCHAIAAHFRDRGD 288 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 NVLL++DS+TR+A + RE+A GE P +GYP SVF LP L+ER G E G+++A+ Sbjct: 289 NVLLLVDSLTRYAMAQRELALALGEPPATKGYPPSVFGMLPALVERAGNGEG-SGSMSAI 347 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VL +GD+ DP+ D+ R+ILDGHI+L+R LA +G YP +D SVSR S+ + Sbjct: 348 YTVLAEGDDEQDPVVDTARAILDGHIMLSRELAAQGHYPAIDVTRSVSRCMSLVASSAQC 407 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 S L L+ R + RD+ +GGY G D D+AV P I FL Q+ D + D Sbjct: 408 AAASELKDLLSRHVQVRDLIPLGGYVAGADPATDRAVELHPRIAAFLSQAQGDAAPYD 465 >gi|115377823|ref|ZP_01465011.1| type III secretion apparatus H+-transporting two-sector ATPase [Stigmatella aurantiaca DW4/3-1] gi|310820302|ref|YP_003952660.1| ATPase, flII/yscn family [Stigmatella aurantiaca DW4/3-1] gi|115365155|gb|EAU64202.1| type III secretion apparatus H+-transporting two-sector ATPase [Stigmatella aurantiaca DW4/3-1] gi|309393374|gb|ADO70833.1| ATPase, FliI/YscN family [Stigmatella aurantiaca DW4/3-1] Length = 436 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 150/336 (44%), Positives = 202/336 (60%), Gaps = 7/336 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+ G+PIDG L + + P R R+E G+R ID + GQ Sbjct: 101 GRVLGGTGEPIDGK-PLPDDLIDWSVDRDCPDPFTRMRIEHPLPLGVRCIDGLLTVGEGQ 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FAGSG+GKSTL+ AR+ + +I+L+GERGREVREFIED LG+ L++SV+V Sbjct: 160 RVGLFAGSGVGKSTLMGQIARNTKAELNVIALIGERGREVREFIEDALGEEGLRRSVLVC 219 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+ ++R A A IAEYF +G NV+ +LD++TR A + REI GE P +G Sbjct: 220 ATSDQPSLVRLKAAYVATAIAEYFRERGGNVMFMLDTVTRLARAQREIGLAVGEPPARQG 279 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVFS LPR+LER G S K G TA+ + LV G + +PIAD VR ILDGH +LNR+ Sbjct: 280 YPPSVFSMLPRILERTGNSAK--GKCTAIYTCLVAGGDMEEPIADEVRGILDGHFILNRA 337 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 L E ++P +D LAS+SR+ S D KK L + +E+ RD+ L+G Y+ G D Sbjct: 338 LGERNQWPAMDVLASLSRVMSGIVSKDHKKAAGKLRETLSTYEKQRDLILLGAYQYGTDP 397 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D A+ + I D+LKQ D S F+E L Sbjct: 398 RTDYAIDKYDAIIDYLKQ---DTHSNSTFEETVNGL 430 >gi|71906409|ref|YP_283996.1| ATPase FliI/YscN [Dechloromonas aromatica RCB] gi|71846030|gb|AAZ45526.1| ATPase FliI/YscN [Dechloromonas aromatica RCB] Length = 472 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 140/318 (44%), Positives = 202/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ +G+P+D L + + + S+ M+R + + GIR I+ + GQ Sbjct: 137 GRVLDGVGRPLDNKGPLIAAE-TRPLQSRPINPMSRAAIHQPLDVGIRAINALLTVGRGQ 195 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FAGSG+GKS LL M AR + +++ L+GERGREV+EFIE LG+ +++SVVV Sbjct: 196 RMGLFAGSGVGKSVLLGMMARYTEAEVIVVGLIGERGREVKEFIEQILGEEGMRRSVVVA 255 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D P++R A TIAEYF +G +VLLI+DS+TR+A + REIA GE P RG Sbjct: 256 APADTGPLMRLQGAAYATTIAEYFRDQGKHVLLIMDSLTRYAMAQREIALAIGEPPATRG 315 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LP+L+ER G ++ G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R+ Sbjct: 316 YPPSVFARLPQLVERAGNGQEGGGSITAFYTVLAEGDDQQDPIADSARAILDGHIVLSRT 375 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G YP +D S+SR A + L R++ +RD+ +G Y PG D Sbjct: 376 LADAGHYPAIDIEQSISRAMVNLIDAPHLDQIRKFKVLFARYQRSRDLISVGAYAPGSDP 435 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LD+A+ P + FL+Q Sbjct: 436 VLDQAISLYPRMESFLQQ 453 >gi|15618617|ref|NP_224903.1| type III secretion system ATPase [Chlamydophila pneumoniae CWL029] gi|15836239|ref|NP_300763.1| type III secretion system ATPase [Chlamydophila pneumoniae J138] gi|16752333|ref|NP_444591.1| type III secretion system ATPase [Chlamydophila pneumoniae AR39] gi|33242065|ref|NP_877006.1| type III secretion system ATPase [Chlamydophila pneumoniae TW-183] gi|4377010|gb|AAD18846.1| Yops secretion ATPase [Chlamydophila pneumoniae CWL029] gi|6672040|dbj|BAA88657.1| Yop N [Chlamydophila pneumoniae] gi|7188979|gb|AAF37934.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila pneumoniae AR39] gi|8979079|dbj|BAA98914.1| YopN [Chlamydophila pneumoniae J138] gi|33236575|gb|AAP98663.1| YopN [Chlamydophila pneumoniae TW-183] Length = 442 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 156/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118 +V+ ++ P+G +S V G I GRV+N LG+PID + Sbjct: 61 EVVGFTQSFAFLSPLGELSGVSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDVETKG 120 Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L D + I P ++R ++ + TG+R ID + GQRIG+FAG+G+GKS+L Sbjct: 121 PLQNVDQTFPIFRAPPDPLHRAKLRQILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSL 180 Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 L M AR ++ D +I+L+GERGREVREFIE LG+ +K+SV+VV+TSD+S LR A Sbjct: 181 LGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LPRLLE Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLE 300 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S +KG ITA +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+ YP +D LA Sbjct: 301 RSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SRL ++++++ ++ +++ + IG YR G D +D A+ + + Sbjct: 359 SISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREIDFAIDHIDKLNR 418 Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438 FLKQ D+ + ++E ++L+ Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438 >gi|295696116|ref|YP_003589354.1| flagellar protein export ATPase FliI [Bacillus tusciae DSM 2912] gi|295411718|gb|ADG06210.1| flagellar protein export ATPase FliI [Bacillus tusciae DSM 2912] Length = 441 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 148/329 (44%), Positives = 204/329 (62%), Gaps = 4/329 (1%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ GRV++ LG+PIDG + G+ I PP M R V + G+R I Sbjct: 92 LRVPTGPGILGRVVDGLGRPIDGLGPVA-GEFQDPIEQPPPPPMARTPVNQPLSVGVRAI 150 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 D + GQRIG+FAGSG+GKSTLL M AR D +I L+GERGREV++FI L + Sbjct: 151 DGLLTVGQGQRIGIFAGSGVGKSTLLGMIARYTEADVTVIGLIGERGREVQDFIARELDE 210 Query: 213 -NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K++VVV ATSD+ P++R LTA +AE F +G VLL++DS+TRFA + RE+ Sbjct: 211 EGRKRAVVVAATSDQPPLMRIKGALTATAMAERFRRQGRRVLLLMDSVTRFAMACREVGL 270 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 +GE P ARGY SVF+ LP+LLER G + G+ITA +VLV+GD+ N+PIAD+VR I Sbjct: 271 AAGEPPTARGYTPSVFAALPKLLERTGTART--GSITAFYTVLVEGDDFNEPIADAVRGI 328 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHIVL+R +A++G YP +D AS SRL ++ + + L+ +EE D+ Sbjct: 329 LDGHIVLSRKIAQQGLYPAIDVTASTSRLMNQVAETAHVRAAARFKALLAAYEEAEDLIQ 388 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 IG YR G L +D A+ P ++ +L Q+ Sbjct: 389 IGAYREGTRLEVDTALRLRPRMWAYLAQN 417 >gi|119476318|ref|ZP_01616669.1| flagellum-specific ATP synthase [marine gamma proteobacterium HTCC2143] gi|119450182|gb|EAW31417.1| flagellum-specific ATP synthase [marine gamma proteobacterium HTCC2143] Length = 474 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 138/320 (43%), Positives = 207/320 (64%), Gaps = 2/320 (0%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ G+P+D LG D S+++ +++ + R+ + + GIR I+ + Sbjct: 107 LLGRVIDGAGRPLDSKGPLGCTD-SVDMQAELINPLQRKPISEVLDVGIRAINSVLTVGR 165 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQR+G+FAGSG+GKS LL M R D V++ LVGERGREV+EFIE L + L ++VV Sbjct: 166 GQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLVGERGREVKEFIEQVLDEEGLSRAVV 225 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V + +D++P++R A + A IAE F +G +VLL++DS+TRFA + REIA + GE P Sbjct: 226 VASPADDAPLMRMRAAMLATRIAESFRDQGKHVLLLMDSLTRFAQAQREIALSIGEPPAT 285 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF+++P+L+ER G G++TA +VL +GD+ DP+AD+ R+ILDGHIVL+ Sbjct: 286 KGYPPSVFAKIPQLVERAGNGADGSGSVTAFYTVLTEGDDMQDPVADAARAILDGHIVLS 345 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA+EG YP +D AS+SR + + L HL R++++RD+ +G Y G Sbjct: 346 RALADEGHYPAIDVEASISRAMPNIITGEHLAAARRLRHLYSRYQQSRDLISVGAYVAGS 405 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D D A+ ++P I FL+Q Sbjct: 406 DTETDAAIERLPAIRRFLQQ 425 >gi|260222427|emb|CBA31980.1| Flagellum-specific ATP synthase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 478 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 146/331 (44%), Positives = 204/331 (61%), Gaps = 4/331 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGI 149 G R+ GRV+++ G P+D L D+S ++ + P AM+R V + TG+ Sbjct: 125 GMLRLPLGDGLLGRVVDSQGFPMDRMGPLA--DVSARVLDRKPINAMDRAPVREALDTGV 182 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 R I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIED Sbjct: 183 RSINALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFIEDI 242 Query: 210 LG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG D ++SVVV A +D P+LR A IAEYF +G +VLL++DS+TR+A + RE Sbjct: 243 LGVDGRERSVVVAAPADAPPLLRMQGASYATAIAEYFRDQGKHVLLLMDSLTRYAMAQRE 302 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 IA GE P +GYP S F++LP+L+ER G G+ITA +VL +GD+ DPIAD+ Sbjct: 303 IALAIGEPPATKGYPPSCFAKLPQLVERSGNGLNGVGSITAFYTVLSEGDDQQDPIADAA 362 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R+ILDGHIVL+RSLAE G YP +D S SR+ + L ++++ RD Sbjct: 363 RAILDGHIVLSRSLAESGHYPAIDVEQSASRVMHNVVDRGHFEQARRFRSLYSKYQKGRD 422 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + IG Y PG D +LD+A+ P + FL+Q Sbjct: 423 LVQIGAYAPGSDPVLDEAIALQPGMIQFLQQ 453 >gi|238023716|ref|YP_002907948.1| type III secretion system ATPase [Burkholderia glumae BGR1] gi|237878381|gb|ACR30713.1| Type III secretion system ATPase [Burkholderia glumae BGR1] Length = 450 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 161/413 (38%), Positives = 232/413 (56%), Gaps = 9/413 (2%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77 V + G + + V+ L V LG+ + + L +V+ D+ + P Sbjct: 29 VARTGKVMEVVGTVIKVSGLD--VTLGELCELRAPDGTLLQRAEVVGFTRDVALLSPFSR 86 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E +S V GR I GRV++ LG+PIDG L D ++ + P M Sbjct: 87 LENVSRATQVIGLGRPLSIQVGDQLLGRVLDGLGEPIDGGPPLDSDDWR-PVIVQPPDPM 145 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R+ V+ TG+RV+D L GQR+G+FA +G+GKSTL+ MFAR D +I+L+G Sbjct: 146 KRRMVDTPMPTGVRVVDAMMTLGEGQRMGIFAPAGVGKSTLMGMFARGAACDINVIALIG 205 Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE LG + + +SVVV ATSD S + R A TA IAEYF +G VLL+ Sbjct: 206 ERGREVREFIELILGPEGMARSVVVCATSDRSSMERAKAAHTATAIAEYFRDRGLRVLLM 265 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ITA+ +VL Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG--MGATGSITALYTVLA 323 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + + DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ + S Sbjct: 324 EDETGGDPVAEEVRGILDGHMILSREIAAKNQYPAIDVLGSLSRVMSLVVPDAHARAASR 383 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + L+ + E + +G Y+PG + + D+A+ + I FL Q D + D Sbjct: 384 IRELMAKHREVEVLLQVGEYQPGQNPLADEAIQKADAIRAFLCQRTRDYAPYD 436 >gi|111115113|ref|YP_709731.1| flagellum-specific ATP synthase [Borrelia afzelii PKo] gi|216264022|ref|ZP_03436016.1| flagellar protein export ATPase FliI [Borrelia afzelii ACA-1] gi|110890387|gb|ABH01555.1| flagellum-specific ATP synthase [Borrelia afzelii PKo] gi|215980066|gb|EEC20888.1| flagellar protein export ATPase FliI [Borrelia afzelii ACA-1] Length = 436 Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 159/406 (39%), Positives = 245/406 (60%), Gaps = 6/406 (1%) Query: 36 VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93 V L +GD ++ Q N +V+ N V + I +G+ V+ + Sbjct: 32 VESLGPQCAVGDLCLIDQRNNKKVCAEVLGFNGPYVSLMAYEGFSGIEVGNKVYSLNKGL 91 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 I+ S GRVI++LG+PID S I K+ P ++R E+ TG++V+D Sbjct: 92 EINLSDELLGRVIDSLGRPIDNKGSFLNNKYKELIFEKINP-ISRSIFEEQILTGVKVLD 150 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 F P+ GQR+G+F+G+G+GKSTLL M A++ D +I+ +GERGRE+ EFIE LG+ Sbjct: 151 GFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSNADVNVIAFIGERGRELNEFIEHELGEE 210 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 LKKSV+VV+TSDESPI R A IAEYF +G +V L+ DSITRFA++ RE++ + Sbjct: 211 RLKKSVLVVSTSDESPISRYKGAYVATMIAEYFRDQGKDVALLFDSITRFANAKREMSLS 270 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE PVA+GYP SVF E+P LLER G + G++T +VLV+GD+ +P+AD+++++L Sbjct: 271 LGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGDDFAEPVADNIKAVL 329 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGH++L+R L + G YP ++ L+S SR + S +++KL+ +L+ +++ D+ Sbjct: 330 DGHVILDRDLFDRGIYPSINILSSTSRSIHRIMSLEKQKLIMKARNLLSVYKDYEDLIRT 389 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKL 437 G Y G + +D A+ + P I DF+ Q ++ E++ EI K L Sbjct: 390 GIYLKGSNKDVDFAISKYPKIIDFISQGINETFDFENLEDEIRKIL 435 >gi|330828802|ref|YP_004391754.1| flagellar protein export ATPase FliI [Aeromonas veronii B565] gi|328803938|gb|AEB49137.1| Flagellar protein export ATPase FliI [Aeromonas veronii B565] Length = 443 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 140/320 (43%), Positives = 202/320 (63%), Gaps = 2/320 (0%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ +G+P+DG + ++ P ++R+ + + G+R I+ + Sbjct: 101 LLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIHQPMDVGVRAINAVLTVGQ 159 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219 GQR+G+FAGSG+GKS LL M R D V++ L+GERGREV+EFIED LG+ + +SVV Sbjct: 160 GQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVKEFIEDILGEEGRARSVV 219 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R TA+ IAEYF +G NVLL++DS+TR+A + REIA GE P Sbjct: 220 VAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRYAQAQREIALAVGEPPAT 279 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+ Sbjct: 280 KGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 339 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA+ G YP +D S+SR+ S + L +L +++ RD+ IG Y G Sbjct: 340 RELADAGHYPAIDIEKSISRVMPMVTSPEHMDLARTLKQFYSLYQQNRDLITIGAYSQGS 399 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D +D+A+ Q P + FL+Q Sbjct: 400 DPRIDRAIIQKPYLDQFLQQ 419 >gi|206558923|ref|YP_002229683.1| flagellum-specific ATP synthase FliI [Burkholderia cenocepacia J2315] gi|18182541|gb|AAL65163.1|AF453480_5 flagellar ATPase [Burkholderia cepacia] gi|198034960|emb|CAR50832.1| flagellum-specific ATP synthase FliI [Burkholderia cenocepacia J2315] Length = 501 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + G Sbjct: 161 GRVVDASGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 218 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 219 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 278 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 279 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 338 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 339 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 398 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 399 ALAEAGHYPAIDIEASISRAMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRD 458 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 459 AQLDRAIALYPRIEAFLQQ 477 >gi|254240042|ref|ZP_04933364.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa 2192] gi|126193420|gb|EAZ57483.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa 2192] Length = 440 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 146/336 (43%), Positives = 209/336 (62%), Gaps = 4/336 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R++ G+V++ LG+P DG + + PP M+R+ +E+ G+R Sbjct: 94 GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPPPMSRRLIERPLSLGVR 152 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 ID GQR+G+FA +G GKSTLL+ R+ D +++LVGERGREVREFIE L Sbjct: 153 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 212 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ L++SV+VVATSD + R A A +IAEYF +G VLL++DS+TRFA + REI Sbjct: 213 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 272 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE P RGYP SVF+ LPRL+ER G SE+ G+ITA+ +VLV+GD+ ++P+AD R Sbjct: 273 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 330 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 SILDGHIVL+R LA YP +D L SVSR+ ++ D++ L + ++EE + Sbjct: 331 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 390 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 IG Y+ G D D+A+ ++ I +L+Q + S Sbjct: 391 LKIGEYQKGQDSEADRAIEKIGAIRQWLRQGTHETS 426 >gi|313895951|ref|ZP_07829505.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon 137 str. F0430] gi|312975376|gb|EFR40837.1| flagellar protein export ATPase FliI [Selenomonas sp. oral taxon 137 str. F0430] Length = 458 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 163/373 (43%), Positives = 228/373 (61%), Gaps = 14/373 (3%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME- 127 V + PVG + I G V GR R+ GRV++ LG PIDG + L+ E Sbjct: 80 VLLMPVGEMQGIGPGCEVTATGRRLRVKVGEELLGRVLDGLGNPIDGKGPI----LTKEE 135 Query: 128 --IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185 + + P ++R R+ + G+R ID L GQRIG+ AGSG+GKSTLLSM AR+ Sbjct: 136 YPLQAPPPSPLSRPRISENLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNT 195 Query: 186 CFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244 D +I+LVGERGREVR+FIE LG+ LK+SVVVVATSD+ ++R +T IAEY Sbjct: 196 EADISVITLVGERGREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEY 255 Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 F +G V+L++DS+TRFA + RE+ GE P RGY SVF+ LPRLLER G S E Sbjct: 256 FRDRGHKVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTS--EH 313 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R +A + +P +D L SVSR+ + Sbjct: 314 GSITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLGSVSRVMYEV 373 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424 + + + L+ + E D+ IG Y G +D A+ ++ I DFL Q ++ Sbjct: 374 VPKEHLEAAQEMRQLMAVYSEAEDLIHIGAYVKGSSPKIDAAIQKIEGINDFLCQDIFEV 433 Query: 425 SSEDVFQEITKKL 437 +S +++ ++L Sbjct: 434 TS---YEDTERRL 443 >gi|325521062|gb|EGC99991.1| flagellum-specific ATP synthase [Burkholderia sp. TJI49] Length = 342 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 145/321 (45%), Positives = 201/321 (62%), Gaps = 4/321 (1%) Query: 101 WCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + Sbjct: 1 MLGRVVDASGRPLDGLGPLASKLDAPLSAPSINP--LDREPIHHVLDVGVRAINGLLTVG 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SV Sbjct: 59 RGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSV 118 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P Sbjct: 119 VVAAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPA 178 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 179 TKGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 238 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R+LAE G YP +D AS+SR + V ++ R++ RD+ +G Y PG Sbjct: 239 SRALAEAGHYPAIDIEASISRAMTALIDDAHLERVRHFKQMLSRYQRNRDLIAVGAYAPG 298 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D LD+A+ P I FL+Q Sbjct: 299 RDAQLDRAIALYPRIESFLQQ 319 >gi|166154011|ref|YP_001654129.1| type III secretion system ATPase [Chlamydia trachomatis 434/Bu] gi|301335211|ref|ZP_07223455.1| type III secretion system ATPase [Chlamydia trachomatis L2tet1] gi|165929999|emb|CAP03482.1| ATP synthase (predicted TTSS protein) [Chlamydia trachomatis 434/Bu] Length = 442 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 155/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118 +V+ + V++ P+G +S V G I GRV+N LG PID + Sbjct: 61 EVVGFTQNFVFLSPLGELTGVSPSSEVMATGLPLHIRAGEGLLGRVLNGLGNPIDTETKG 120 Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L D I P ++R ++ TG+R ID + GQRIG+FAG+G+GKS+L Sbjct: 121 PLENVDAIYPIFKAPPDPLHRAKLRTILSTGVRCIDGMLTVAKGQRIGIFAGAGVGKSSL 180 Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 L M AR ++ D +I+L+GERGREVREFIE+ LG+ +K+S++VV+TSD+S LR A Sbjct: 181 LGMIARNAEEADINVIALIGERGREVREFIENDLGEEGMKRSIIVVSTSDQSSQLRLNAA 240 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LP+LLE Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLE 300 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S +KG ITA +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+ YP +D LA Sbjct: 301 RAGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SRL ++++++ ++ +++ + IG YR G D +D A+ + + Sbjct: 359 SISRLLTAIVPEEQRRIIGRAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418 Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438 FLKQ D+ + ++E ++L+ Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438 >gi|269302494|gb|ACZ32594.1| type III secretion apparatus H+-transporting two-sector ATPase [Chlamydophila pneumoniae LPCoLN] Length = 442 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 156/383 (40%), Positives = 231/383 (60%), Gaps = 10/383 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS- 118 +V+ ++ P+G +S V G I GRV+N LG+PID + Sbjct: 61 EVVGFTQSFAFLSPLGELSGVSPSSEVIPTGLPLHIRAGNGLLGRVLNGLGEPIDVETKG 120 Query: 119 -LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L D + I P ++R ++ + TG+R ID + GQRIG+FAG+G+GKS+L Sbjct: 121 PLQNVDQTFPIFRAPPDPLHRAKLRQILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSL 180 Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 L M AR ++ D +I+L+GERGREVREFIE LG+ +K+SV+VV+TSD+S LR A Sbjct: 181 LGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LPRLLE Sbjct: 241 YVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLE 300 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S +KG ITA +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+ YP +D LA Sbjct: 301 RSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SRL ++++++ ++ +++ + IG YR G D +D A+ + + Sbjct: 359 SISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418 Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438 FLKQ D+ + ++E ++L+ Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438 >gi|312879586|ref|ZP_07739386.1| type III secretion system ATPase, FliI/YscN [Aminomonas paucivorans DSM 12260] gi|310782877|gb|EFQ23275.1| type III secretion system ATPase, FliI/YscN [Aminomonas paucivorans DSM 12260] Length = 443 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 154/361 (42%), Positives = 222/361 (61%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ D V + P+G +I G D+V + GR+++ LG P+DG L Sbjct: 64 EVVGFRSDRVLLMPLGELSDIGPGCDVVAMGPTLGVHVGDSLLGRIVDGLGVPLDGKGPL 123 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + + P + RQ ++K G++V+D L GQR+G+FAGSG+GKS LL Sbjct: 124 VAKDF-YPLFATPPHPLKRQMIDKPLSVGVKVLDGLLTLGQGQRVGIFAGSGVGKSVLLG 182 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238 M AR+ +I+LVGERGREV+EF+E LG+ L +SVVVVATSD+ P++R A LTA Sbjct: 183 MMARNTEAAVNVIALVGERGREVKEFVERDLGEAGLARSVVVVATSDQPPLVRLKAALTA 242 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G NVLL++DS+TR A + R++ GE P RGY SVF+ LPRLLER G Sbjct: 243 TAIAEYFRDQGGNVLLMMDSVTRVAMAQRDVGLAIGEPPATRGYTPSVFAFLPRLLERSG 302 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+G+ITA+ +VLV+GD+ N+P+AD+VR ILDGH VL+R+LA + YP V+ SVS Sbjct: 303 AG--ERGSITAIYTVLVEGDDMNEPVADTVRGILDGHFVLSRTLAAKNHYPSVEVGRSVS 360 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S + + + L+ +EE +D+ IG Y+ G + +D A+ + + FL+ Sbjct: 361 RVMPSIVSPEHLEAAGRIRELLAVYEEAQDLVNIGAYKAGSNPRVDWALENLDPVRRFLR 420 Query: 419 Q 419 Q Sbjct: 421 Q 421 >gi|291536005|emb|CBL09117.1| type III secretion system ATPase, FliI/YscN [Roseburia intestinalis M50/1] Length = 435 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 151/374 (40%), Positives = 234/374 (62%), Gaps = 6/374 (1%) Query: 48 FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVI 106 ++ + +N + +V+ + + P E I +G +V + G + G + Sbjct: 45 IIIDREQNISTMAEVVGFRDKHLLLMPFESVEGIGVGCIVENTGHPLTVKVGEELLGHTL 104 Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 + +G+P D ++ D +E + P M R+ +++ G++ +D + GQRIG+ Sbjct: 105 DGIGRPTDVEELSLSYDYPVEALP--PDPMARKIIDEVLPLGVKAVDGLITVGKGQRIGI 162 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 FAGSG+GKSTLL MFAR+ D +I+L+GERGREVREF+E LG+ +K+SVV+VATSD Sbjct: 163 FAGSGVGKSTLLGMFARNTKADINVIALIGERGREVREFVERDLGEEGMKRSVVIVATSD 222 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 + ++R A TA IAEYF +G +VLL++DS+TRF+ + REI SGE PV RGYP S Sbjct: 223 KPALIRNKAAKTATAIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPS 282 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 V+SE+P+LLER G S +KG+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+R L ++ Sbjct: 283 VYSEMPKLLERAGTS--DKGSITGLYTVLVDGDDMNEPITDTARSILDGHIMLSRKLGQK 340 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 YP +D L S+SR+ +++ K+L L +++ + E D+ IG Y+ G + +D Sbjct: 341 NHYPAIDVLQSISRVMSSIATSEHKELAGKLRNVMATYNEAEDLINIGAYKNGTNREIDY 400 Query: 406 AVHQVPIIYDFLKQ 419 A+ + + +FL Q Sbjct: 401 AIQKNQAVNEFLMQ 414 >gi|291277238|ref|YP_003517010.1| flagellum-specific ATP synthase [Helicobacter mustelae 12198] gi|290964432|emb|CBG40282.1| flagellum-specific ATP synthase [Helicobacter mustelae 12198] Length = 434 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 167/444 (37%), Positives = 248/444 (55%), Gaps = 22/444 (4%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59 ++ LE QL+ + G + IT + L+ +GD V VH+ S L Sbjct: 6 IKAKLEAPLQLSPKF--------GLVEKITPTILYASGLTP--SIGDIVCVHREDGSSGL 55 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 G V + P E +GD VF F + GRVI+ LG PID Sbjct: 56 GMVTLCQSENFGFTPFSFIEGYKVGDKVFIEKEGFLLPVGKDVLGRVIDPLGNPIDE--- 112 Query: 119 LGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 KG ++ + I+S+ AM R +++ F GI+ ID GQ++G+FAGSG+GK Sbjct: 113 --KGPITTSAHIPIISQPIKAMRRGVIDEVFSVGIKAIDGLLTCGKGQKLGIFAGSGVGK 170 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STL+ M + +++L+GERGREV EFI+ L +NL+ +V+VVATSD+S ++RK Sbjct: 171 STLMGMIVKGSKAPIKVVALIGERGREVPEFIQKNLDNNLENTVIVVATSDDSALMRKYG 230 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 +A+ +AE+F ++G +VL I+DS+TRFA + REI GE P ++GYP SV + LP+L+ Sbjct: 231 AFSAMAVAEFFKNQGHDVLFIMDSVTRFAMAQREIGLALGEPPTSKGYPPSVLALLPQLM 290 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G E+ +G+ITA +VLV+GD+ +DPIAD RSILDGHIVL+R L + G YPP+ L Sbjct: 291 ERAG-KEEGRGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLSRELTDFGIYPPIHIL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+++ + + + + L +E + IG Y+ G D LD+A+ + + Sbjct: 350 NSASRVSNDIITKEHRNAAKNFRKLYALLKENEVLIRIGSYQKGTDPDLDEAIEKKKFME 409 Query: 415 DFLKQSPSDLSSEDVFQEITKKLQ 438 DF+ Q L D E K+Q Sbjct: 410 DFITQEEDQLFDFDAIIEELYKIQ 433 >gi|330953751|gb|EGH54011.1| flagellum-specific ATP synthase [Pseudomonas syringae Cit 7] Length = 452 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 150/359 (41%), Positives = 212/359 (59%), Gaps = 3/359 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +E G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + L R+++TRD+ +G Y G D D A+ P++ + +Q D S Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 434 >gi|302342350|ref|YP_003806879.1| flagellar protein export ATPase FliI [Desulfarculus baarsii DSM 2075] gi|301638963|gb|ADK84285.1| flagellar protein export ATPase FliI [Desulfarculus baarsii DSM 2075] Length = 438 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 154/363 (42%), Positives = 218/363 (60%), Gaps = 4/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDD 117 LG+V+ V I P + G LV G + GRV++ LG P+DG Sbjct: 56 LGEVVGFKGQGVQIMPYADTRGLRPGCLVSSAGGAGLVKVGQALLGRVLDGLGNPVDGG- 114 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + + D + + P AM R R+ + G++VI+ L GQRIG+FAGSG+GKSTL Sbjct: 115 PMPEWDQLYPLYRQAPSAMGRPRISQPVDVGVKVINALLTLGKGQRIGIFAGSGVGKSTL 174 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 +SM AR D +I LVGERGRE+REFIE LG + L +SVV+VATSD+ ++R A Sbjct: 175 MSMIARHTQADISVIGLVGERGRELREFIERDLGPEGLARSVVIVATSDQPALVRMRAAY 234 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +AEYF + +V+L++DS+TRFA + RE+ + GE P +GY SVF++LPRLLER Sbjct: 235 LATAVAEYFRDQSRDVILMMDSVTRFAMAGREVGLSIGEPPTTKGYTPSVFAQLPRLLER 294 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE G+IT + +VLV+GD+ +P+AD++RSILDGH VL R+LA+ G YP ++ L S Sbjct: 295 AGTSEG-GGSITGIYTVLVEGDDVTEPVADAMRSILDGHFVLTRALADRGHYPAIELLGS 353 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SRLA + LT L+ + D+ IG Y G + ++D+A+ + I F Sbjct: 354 ISRLARDINPPEVTTAARRLTELLAAYRRNEDLINIGAYADGSNPVIDRAIRMMERINKF 413 Query: 417 LKQ 419 L Q Sbjct: 414 LTQ 416 >gi|167617532|ref|ZP_02386163.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis Bt4] Length = 423 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 146/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+D L K D + S P ++R+ + G+R I+ + G Sbjct: 83 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 141 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 200 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A T+AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 201 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 260 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 261 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 320 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR + V ++ R++ RD+ +G Y PG D Sbjct: 321 SLAEAGHYPAIDIEASISRAMTALIDDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRD 380 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 381 AQLDRAIALYPRIESFLQQ 399 >gi|296123334|ref|YP_003631112.1| ATPase, FliI/YscN family [Planctomyces limnophilus DSM 3776] gi|296015674|gb|ADG68913.1| ATPase, FliI/YscN family [Planctomyces limnophilus DSM 3776] Length = 443 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 214/332 (64%), Gaps = 10/332 (3%) Query: 99 ACWCGRVINALGKPID-GDDSL--GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 A GR+I + G+ +D G L + DL K P + R R+ K ++TG+R ID Sbjct: 93 AGLLGRIIGSRGEFLDEGSKPLLAHRADLH----GKPPGPLERPRIAKIWQTGVRAIDSL 148 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNL 214 L GQR+G+FAGSG+GKSTLL AR D +++L+GERGREVREF++ LG + L Sbjct: 149 LTLGEGQRMGIFAGSGVGKSTLLGQIARHSSADINVVALIGERGREVREFLDRDLGPEGL 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K+SVV+VAT DE ILR A A IAE+F G +V+L++DS+TRFA + REI +G Sbjct: 209 KRSVVIVATGDEPAILRLRAAWMATAIAEHFRDLGQHVVLMMDSVTRFALAQREIGLAAG 268 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E P RGYP SVF+ LPRLLER G S G+IT + +VLVDGD+ N+PI+D+VR ILDG Sbjct: 269 EPPATRGYPPSVFALLPRLLERSGCSPA--GSITGLYTVLVDGDDTNEPISDTVRGILDG 326 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+R LA++G++P +D L S+SR + + + ++ ++ L+ +++ D+ IG Sbjct: 327 HIVLSRKLAQQGQFPAIDVLQSISRSMNDITTTEHRQWALTVRQLLSSYQQNEDLISIGA 386 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 Y+ G + ++D A+ P I +L Q P + ++ Sbjct: 387 YQNGSNALIDSAIQARPQILGYLGQKPQEQTT 418 >gi|260900953|ref|ZP_05909348.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio parahaemolyticus AQ4037] gi|308110837|gb|EFO48377.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio parahaemolyticus AQ4037] Length = 440 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 152/357 (42%), Positives = 213/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G++++ LG+P DG S + + Sbjct: 88 VSPMGKMHEVGVGDHLL--------------GKILDGLGRPFDGAQSQ-EPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG D + +SV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ D + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPDHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + L ++ ++EE + IG Y+ G D D A+ Q I FL+Q PSDL Sbjct: 371 ASAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPSDL 427 >gi|295399812|ref|ZP_06809793.1| flagellar protein export ATPase FliI [Geobacillus thermoglucosidasius C56-YS93] gi|294978215|gb|EFG53812.1| flagellar protein export ATPase FliI [Geobacillus thermoglucosidasius C56-YS93] Length = 426 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 154/361 (42%), Positives = 220/361 (60%), Gaps = 5/361 (1%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P + IS G +V G+ +I G+V+++LG P+DG L KG + I Sbjct: 56 VLLMPFSTVQHISPGCIVEATGKPLQIRVGFPLIGKVLDSLGYPLDGS-PLSKGLQPISI 114 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 P + R + + + G+RVID + GQR+G+FAGSG+GKSTL+ M AR D Sbjct: 115 ERNPPNPLARPPISEPIEVGVRVIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARHTNAD 174 Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+L+GERGREVREFIE LG + L +S+VVVATSD+ ++R TA IAEYF Sbjct: 175 INVIALIGERGREVREFIERDLGPEGLARSIVVVATSDQPALMRVKGAYTATAIAEYFRD 234 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G +V+ ++DS+TR A + REI GE P +GY SVF+ LP+LLER G G I Sbjct: 235 QGMDVMFMMDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFAILPKLLERTG--TNACGTI 292 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VLVDGD+ N+PIAD+VR ILDGH+VL RSLA +G+YP ++ L SVSR+ + S Sbjct: 293 TAFYTVLVDGDDMNEPIADTVRGILDGHLVLERSLANKGQYPAINVLKSVSRVMNHIISP 352 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 + ++ L L+ + + D+ IG Y+ G +D+A+ P I F KQ + +++ Sbjct: 353 EHRQAADKLRQLLSTYINSEDLINIGAYKRGSSKEIDEAIRYYPEIISFCKQDIDEKATK 412 Query: 428 D 428 D Sbjct: 413 D 413 >gi|34498451|ref|NP_902666.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC 12472] gi|34104306|gb|AAQ60665.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC 12472] Length = 437 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 147/342 (42%), Positives = 205/342 (59%), Gaps = 11/342 (3%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTP 157 W GR++N LG+P+DG LG GD + + PP +N ++ V+ G+R I+ F Sbjct: 98 WLGRIVNGLGEPLDGKGRLG-GDAPL---AAHPPQINPLKKKPVDTPLDVGVRAINGFLT 153 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216 + GQR+G+FAGSG+GKS LL M R + V++ L+GERGREVREF+E LG + L K Sbjct: 154 MGRGQRVGLFAGSGVGKSVLLGMITRHTEAEVVVVGLIGERGREVREFVEHALGAEGLAK 213 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V+VVA +DESP++R A TIA ++ +G NVLL++DS+TR+A + RE+A GE Sbjct: 214 AVLVVAPADESPLMRLKATELCHTIAAHYRDRGRNVLLLVDSLTRYAMAQREVALALGEP 273 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P RGYP SVF LP L E G E G+++A+ +VL +GD+ DP+ D+ R+ILDGHI Sbjct: 274 PATRGYPPSVFGLLPSLAESAGNGEGGAGSMSAIYTVLAEGDDQQDPVVDTARAILDGHI 333 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LAE G YP +D SVSR + AD + L R++E R + +G Y Sbjct: 334 VLSRELAERGHYPAIDISRSVSRCMSQLIDADHAAVARELRGAWSRYQEVRGLLPLGAYV 393 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 PG D D+A+ P I L Q D + E +LQ Sbjct: 394 PGADPATDRALRLQPRIEALLCQ---DAGEAAPYAECLSRLQ 432 >gi|134297243|ref|YP_001120978.1| flagellar protein export ATPase FliI [Burkholderia vietnamiensis G4] gi|134140400|gb|ABO56143.1| flagellar protein export ATPase FliI [Burkholderia vietnamiensis G4] Length = 508 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 146/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + G Sbjct: 168 GRVVDASGRPLDGLGPLAAKVDAPLSAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 225 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 226 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 285 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 286 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 345 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 346 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 405 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 406 SLAEAGHYPAIDIEASISRAMTALIDEGHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 465 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 466 AQLDRAIALYPRIEAFLQQ 484 >gi|284007158|emb|CBA72440.1| flagellum-specific ATP synthase FliI [Arsenophonus nasoniae] Length = 463 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 145/346 (41%), Positives = 211/346 (60%), Gaps = 5/346 (1%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 +F + P+ GRV++ G+P+DG SL D +++ + R + G+R Sbjct: 111 QFPLGPA--LLGRVLDGFGEPLDGK-SLPTTDCHASLVTAPINPLQRAPINHPLDVGVRA 167 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG Sbjct: 168 INSLLTVGRGQRMGLFAGSGVGKSMLLGMMARYTQADVIVVGLIGERGREVKDFIENILG 227 Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + L++SVV+ A +D SP+LR A IAE F +G NVLLI+DS+TR+A + REIA Sbjct: 228 PEGLQRSVVIAAPADVSPLLRLQGATYATRIAEDFRDRGLNVLLIMDSLTRYAMAQREIA 287 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 GE P +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ Sbjct: 288 LAIGEPPATKGYPPSVFAKLPTLIERAGNGIQGSGSITAFYTVLTEGDDQQDPIADSARA 347 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 ILDGHIVL+R+LAE G YP +D AS+SR + L+ R++ +D+ Sbjct: 348 ILDGHIVLSRTLAESGHYPAIDIEASISRAMNSLVDKSHLYQAQQFKQLLSRYQRNQDLI 407 Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITK 435 +G Y G D ILD+A+ P + FL+Q + S E +Q++ + Sbjct: 408 NVGAYAVGSDPILDQAIQLYPHLQQFLRQDCDEYCSKESAYQQLCQ 453 >gi|320529382|ref|ZP_08030470.1| flagellar protein export ATPase FliI [Selenomonas artemidis F0399] gi|320138348|gb|EFW30242.1| flagellar protein export ATPase FliI [Selenomonas artemidis F0399] Length = 458 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 163/373 (43%), Positives = 228/373 (61%), Gaps = 14/373 (3%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME- 127 V + PVG + I G V GR R+ GRV++ LG PIDG + L+ E Sbjct: 80 VLLMPVGEMQGIGPGCEVTATGRRLRVKVGEELLGRVLDGLGNPIDGKGPI----LTKEE 135 Query: 128 --IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185 + + P ++R R+ + G+R ID L GQRIG+ AGSG+GKSTLLSM AR+ Sbjct: 136 YPLQAPPPSPLSRPRIGENLYVGVRAIDGLITLGDGQRIGIMAGSGVGKSTLLSMIARNT 195 Query: 186 CFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEY 244 D +I+LVGERGREVR+FIE LG+ LK+SVVVVATSD+ ++R +T IAEY Sbjct: 196 EADISVITLVGERGREVRDFIERDLGEEGLKRSVVVVATSDQPALVRIKGAMTGTAIAEY 255 Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 F +G V+L++DS+TRFA + RE+ GE P RGY SVF+ LPRLLER G S E Sbjct: 256 FRDRGHKVVLMMDSVTRFAMAQREVGLTIGEPPATRGYTPSVFAMLPRLLERAGTS--EH 313 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL+R +A + +P +D L SVSR+ + Sbjct: 314 GSITGIYTVLVDGDDMNEPIADAVRSILDGHIVLSRRIAAQNHFPAIDVLGSVSRVMYEV 373 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424 + + + L+ + E D+ IG Y G +D A+ ++ I DFL Q ++ Sbjct: 374 VPKEHLEAAQEMRQLMAVYSEAEDLIHIGAYVKGSSPKIDAAIQKIEGINDFLCQDIFEV 433 Query: 425 SSEDVFQEITKKL 437 +S +++ ++L Sbjct: 434 TS---YEDTERRL 443 >gi|323493125|ref|ZP_08098256.1| flagellum-specific ATP synthase FliI [Vibrio brasiliensis LMG 20546] gi|323312596|gb|EGA65729.1| flagellum-specific ATP synthase FliI [Vibrio brasiliensis LMG 20546] Length = 447 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 149/381 (39%), Positives = 228/381 (59%), Gaps = 5/381 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + I Y+ P+ +G + ++ G + S W GRV+N LG+ +D + Sbjct: 66 AQVVGFDHTIAYLMPIRRLGGLFAGAKVIPLQGDSTVQLSDQWLGRVLNGLGEAMDDGPA 125 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L G+ + + P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L+ Sbjct: 126 LQGGERVSLDPTPINP-LKRRPVDSPLNVGVRAINGLMTVGKGQRIGLMAGSGVGKSVLM 184 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLT 237 M +++ D +++ L+GERGREVREFIE L + KK++++ A +DESP++R A L Sbjct: 185 GMISQNTEADVIVVGLIGERGREVREFIERNLTEEARKKAIIIAAPADESPLMRLRATLL 244 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 ++EYF KG +VLL++DS+TR+A + REIA + GE P +RGYP SVF+ LP+LLER Sbjct: 245 CHRVSEYFRDKGKDVLLMMDSLTRYAMAQREIALSLGEPPASRGYPPSVFNVLPQLLERA 304 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G S + G++TA+ ++L GD+ DP+ DS R+ILDGH+VL+R LAE+G YP +D ASV Sbjct: 305 GNSANQDGSLTAIYTILAAGDDQQDPVVDSARAILDGHVVLSRKLAEQGHYPAIDINASV 364 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR L S + + +++ +GGY+PG D LD++V P + +L Sbjct: 365 SRCMTACSQPAHLTLASEFRKTYASYLQVKELLPLGGYQPGQDPELDRSVALYPQLVAYL 424 Query: 418 KQSPSDLSSEDVFQEITKKLQ 438 +QS S D Q +T+ Q Sbjct: 425 QQSQH--CSVDYQQSLTELAQ 443 >gi|302185559|ref|ZP_07262232.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. syringae 642] Length = 452 Score = 270 bits (691), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 150/359 (41%), Positives = 212/359 (59%), Gaps = 3/359 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +E G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + L R+++TRD+ +G Y G D D A+ P++ + +Q D S Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 434 >gi|107023998|ref|YP_622325.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia AU 1054] gi|116691085|ref|YP_836708.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia HI2424] gi|105894187|gb|ABF77352.1| Flagellar protein export ATPase FliI [Burkholderia cenocepacia AU 1054] gi|116649174|gb|ABK09815.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia HI2424] Length = 513 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 206/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + G Sbjct: 173 GRVVDASGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 230 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 231 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 290 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 291 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 350 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 351 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 410 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA--DEKKL--VSSLTHLIHRFEETRDIRLIGGYR 396 +LAE G YP +D AS+SR A +A DE L V ++ R++ RD+ +G Y Sbjct: 411 ALAEAGHYPAIDIEASISR----AMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYA 466 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 PG D LD+A+ P I FL+Q Sbjct: 467 PGRDAQLDRAIALYPRIEAFLQQ 489 >gi|71736661|ref|YP_275538.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557214|gb|AAZ36425.1| flagellum-specific ATP synthase FliI [Pseudomonas syringae pv. phaseolicola 1448A] gi|320325117|gb|EFW81186.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. glycinea str. B076] gi|320329376|gb|EFW85369.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. glycinea str. race 4] gi|330986492|gb|EGH84595.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011067|gb|EGH91123.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 452 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 150/359 (41%), Positives = 212/359 (59%), Gaps = 3/359 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +E G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + L R+++TRD+ +G Y G D D A+ P++ + +Q D S Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 434 >gi|323143309|ref|ZP_08078000.1| type III secretion apparatus H+-transporting two-sector ATPase [Succinatimonas hippei YIT 12066] gi|322416926|gb|EFY07569.1| type III secretion apparatus H+-transporting two-sector ATPase [Succinatimonas hippei YIT 12066] Length = 438 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 161/386 (41%), Positives = 227/386 (58%), Gaps = 6/386 (1%) Query: 53 GKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGK 111 G+N +V+ + + + P+G E IS V G P GRV+N +G Sbjct: 53 GENWMLRAEVVGFSKNTALLTPLGDLEGISYHTEVIPTGHVLSVPVGEELLGRVLNGVGD 112 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 DG +L K + + P AM R+ +EK G+RV+D GQR+G+FA +G Sbjct: 113 VADGGPAL-KTHKFYPVYADPPAAMQRKLIEKPVSLGLRVLDGVLTCGQGQRMGIFAAAG 171 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230 GKSTLLS + + +++L+GERGREVREFIE LG + +KK+V+VV+TSD S + Sbjct: 172 GGKSTLLSSIIKGTSAEICVLALIGERGREVREFIERDLGPEGMKKAVLVVSTSDRSSME 231 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R A TA IAEYF +G NVLL++DS+TRF + REI +GE P RG+P SVFS L Sbjct: 232 RLKAAYTATAIAEYFRDEGKNVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTL 291 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 P+L+ER G S +KG+ITA+ +VLV+GD+ +PIAD RSILDGHI+L+R LA YP Sbjct: 292 PKLMERAGNS--DKGSITALYTVLVEGDDMTEPIADETRSILDGHIILSRKLAAANHYPA 349 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410 +D LASVSR+ + S + K L ++ ++ E + +G Y+ G D D A+ + Sbjct: 350 IDVLASVSRVMNTIVSKEHKAAAQKLRQILAKYSEIELLVQLGEYKKGNDAEADFALSHI 409 Query: 411 PIIYDFLKQSPSDLSS-EDVFQEITK 435 + FLKQ + SS ED ++ K Sbjct: 410 DAVNKFLKQGLDEKSSFEDTVSQLLK 435 >gi|254785461|ref|YP_003072890.1| flagellum-specific ATP synthase [Teredinibacter turnerae T7901] gi|237687407|gb|ACR14671.1| flagellar protein export ATPase FliI [Teredinibacter turnerae T7901] Length = 480 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 141/319 (44%), Positives = 204/319 (63%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+DG + + + +E + P ++R +++ GIR I+ + G Sbjct: 108 GRILNGVGQPLDGLGPVSCRAKVDLEPSTINP--LHRHPIDETLDVGIRAINSLLTVGKG 165 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QRIG+FAGSG+GKS LL M R D V++ L+GERGREV+EF++ LG LKKSVVV Sbjct: 166 QRIGLFAGSGVGKSVLLGMMTRFTTADVVVVGLIGERGREVKEFVDHILGPQGLKKSVVV 225 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D++P++R A A IAEYF +G NVLL++DS+TRFA + REI+ GE P + Sbjct: 226 AAPADDAPLMRLRASQLATRIAEYFRDQGKNVLLLMDSLTRFAQAQREISLAIGEPPATK 285 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF+++P L+ER G +K G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 286 GYPPSVFAKIPDLVERAGNGDKGGGSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSR 345 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE+G YP +D AS+SR+ A+ L+ R+ E +D+ IG Y G D Sbjct: 346 QLAEQGIYPAIDIEASISRVMPNIVDANHLAAAQRFKQLLARYRENKDLIAIGAYARGSD 405 Query: 401 LILDKAVHQVPIIYDFLKQ 419 +D A+ + P + F+ Q Sbjct: 406 PQIDAAIERFPHLQQFIGQ 424 >gi|149194683|ref|ZP_01871778.1| flagellum-specific ATP synthase [Caminibacter mediatlanticus TB-2] gi|149135106|gb|EDM23587.1| flagellum-specific ATP synthase [Caminibacter mediatlanticus TB-2] Length = 430 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 161/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G+I I T L+ V GD +V N LG V + + I P E + + Sbjct: 19 GFIKKINPTNIIATGLNPSV--GD-IVEIKSNIPTLGMVTSVMENEFIITPFSFVEGMKI 75 Query: 84 GDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 GD V+ ++ GRV++ +PIDG + K + IM K + R + Sbjct: 76 GDRVYIDEEGMKVPVGEGLLGRVVDPFLRPIDGKGEI-KYETKYPIMRKPISPLQRGVIN 134 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + F TG++ ID GQ++G+FAGSG+GKSTL+SM R D +I+L+GERGRE+ Sbjct: 135 EVFPTGVKAIDGLLTCGKGQKLGIFAGSGVGKSTLMSMIVRGSESDIKVIALIGERGREI 194 Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 EFIE L +L +V++VATSD+S ++RK +A+ +AEYF K +VL ++DS+TRF Sbjct: 195 PEFIEHNLKGDLTNTVIIVATSDDSALMRKYGAFSAMAVAEYFKDKNKDVLFLMDSVTRF 254 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN- 321 A + REI GE P ++GYP S LP+L+ER G EK KG+ITA +VLV+GD+ + Sbjct: 255 AMAQREIGLAMGEPPTSKGYPPSAIMLLPQLMERAG-KEKNKGSITAFFTVLVEGDDTSA 313 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 DPIAD RSILDGHI+L+R L + G YPP++ L S SR+ + + + + L Sbjct: 314 DPIADQARSILDGHILLDRELTDFGIYPPINILKSASRVMNNIVTPEHLQKAQKFKKLYA 373 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434 +E + IG Y+ G D LD+A+ + + +FLKQ P+ L F+ IT Sbjct: 374 LLKENEVLIRIGAYQKGTDPELDEAIAKKEAMEEFLKQPPTALFK--FFETIT 424 >gi|71281978|ref|YP_268247.1| flagellum-specific ATP synthase [Colwellia psychrerythraea 34H] gi|71147718|gb|AAZ28191.1| flagellum-specific ATP synthase FliI [Colwellia psychrerythraea 34H] Length = 449 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 156/367 (42%), Positives = 229/367 (62%), Gaps = 3/367 (0%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPI 113 + D L +V+ DI Y+ P + G V + ++ S GRVIN +GKP+ Sbjct: 56 HGDLLAEVVGFAQDITYLMPEESLRGVMPGARVLPISSKAKVPLSMGLLGRVINGVGKPL 115 Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 D + K D SK ++R+ + + G+R I+ F + GQR+G+FAGSG+G Sbjct: 116 DSKGPI-KADNDYHHDSKPINPLSRRAITEVLDVGVRSINSFISVGKGQRMGLFAGSGVG 174 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232 KS L+ M R D V++ LVGERGREV+EFIE+ LG+ LK++VVV A +D SP++R Sbjct: 175 KSVLMGMMTRGTTADVVVVGLVGERGREVKEFIEEILGEEGLKRAVVVAAPADNSPLMRL 234 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 TAV I+EYF +G NVLL+LDS+TR+A + REIA GE P +GYP SVFS+LP+ Sbjct: 235 KGCETAVQISEYFRDQGLNVLLLLDSLTRYAQAQREIALAVGEPPATKGYPPSVFSKLPQ 294 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 L+ER G + +G+ITA +VL +GD+ DP+AD+ R+ILDGH+VL+R LA+ G YP V+ Sbjct: 295 LVERAGNGGEGQGSITAFYTVLTEGDDLQDPVADAARAILDGHVVLSRELADAGHYPAVN 354 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 S+SR+ SAD ++L L + +++ +D+ IG Y G D +D+A++ +P+ Sbjct: 355 IEGSISRVMPMVTSADHQELAKQLKQMYALYQQNKDLIAIGAYTKGNDPRIDQAINVLPV 414 Query: 413 IYDFLKQ 419 I FL+Q Sbjct: 415 INFFLQQ 421 >gi|221215782|ref|ZP_03588741.1| flagellar protein export ATPase FliI [Burkholderia multivorans CGD1] gi|221164318|gb|EED96805.1| flagellar protein export ATPase FliI [Burkholderia multivorans CGD1] Length = 527 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + G Sbjct: 190 GRVVDAAGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 247 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 248 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 307 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 308 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 367 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 368 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 427 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 428 ALAEAGHYPAIDIEASISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRD 487 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 488 AQLDRAIALYPRIEAFLQQ 506 >gi|161526233|ref|YP_001581245.1| flagellar protein export ATPase FliI [Burkholderia multivorans ATCC 17616] gi|160343662|gb|ABX16748.1| flagellar protein export ATPase FliI [Burkholderia multivorans ATCC 17616] Length = 524 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + G Sbjct: 187 GRVVDAAGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 244 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 245 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 304 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 305 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 364 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 365 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 424 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 425 ALAEAGHYPAIDIEASISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRD 484 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 485 AQLDRAIALYPRIEAFLQQ 503 >gi|33600613|ref|NP_888173.1| type III secretion system ATPase [Bordetella bronchiseptica RB50] gi|33568212|emb|CAE32125.1| putative ATP synthase in type III secretion system [Bordetella bronchiseptica RB50] Length = 444 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 157/410 (38%), Positives = 236/410 (57%), Gaps = 16/410 (3%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75 L ++G + + ++ V + + VCL + + G++ + G+V+ D + P+ Sbjct: 20 TLRIKGRVVQVVGTIIKAVVPMVKIGEVCL---LRNPGEDFEMHGEVVGFVRDAALLTPI 76 Query: 76 GIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME----IMS 130 G IS V GR + P GRV++ LG+P+D +S G L + + Sbjct: 77 GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAES---GPLHAHKFYPVFA 133 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 P + R+ + + G+RV+D GQR+G+FA +G GKSTLL M + D Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193 Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +++L+GERGREVREF+E LG + +KSV+V ATSD+S + R A A IAEYF +G Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VL ++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G ++ G+ITA Sbjct: 254 QRVLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQT--GSITA 311 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLV+GD+ N+P+AD RSILDGHIVL+R L YP VD LAS SR+ + S Sbjct: 312 LYTVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRH 371 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 K L + L+ ++++ + IG Y+ G D D+A+ ++ I FL+Q Sbjct: 372 KYLAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQ 421 >gi|300693817|ref|YP_003749790.1| type III secretion system atpase [Ralstonia solanacearum PSI07] gi|299075854|emb|CBJ35163.1| type III secretion system ATPase [Ralstonia solanacearum PSI07] Length = 439 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 152/371 (40%), Positives = 216/371 (58%), Gaps = 5/371 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 G+V+ + + P G +S V GR + GRV++ LG+P DG Sbjct: 60 GEVVGFSEHFALVAPFGGVTGLSRSTRVVPSGRALSVGIGPGLLGRVLDGLGRPADGGPP 119 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D + + + P M R+ VE+ TG+RVID L GQR+G+FA +G+GKSTL+ Sbjct: 120 LEVVDY-VPVFANAPDPMTRRLVEQPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLM 178 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I L+GERGREVREFIE LG + +++SVVV ATSD S + R A Sbjct: 179 GMFARGTDCDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAYV 238 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 +AEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 239 GTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERA 298 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G S G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R +A RYP +D L S+ Sbjct: 299 GMS--AAGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSL 356 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L+ ++ E + +G Y+ G D + D AV + FL Sbjct: 357 SRVMTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMESFL 416 Query: 418 KQSPSDLSSED 428 +Q + S D Sbjct: 417 RQRTDEWCSPD 427 >gi|262273537|ref|ZP_06051351.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP 101886] gi|262222515|gb|EEY73826.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP 101886] Length = 413 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 142/334 (42%), Positives = 208/334 (62%), Gaps = 6/334 (1%) Query: 90 WGRFRISPSACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKT 147 +G +I GRV+N LG+P+D SLG + + + + RQ + Sbjct: 62 FGDSKIPVGPNLLGRVLNGLGEPLD---SLGPLCCEQRVPLQGDTINPLKRQPITHQLDV 118 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G+R I+ + GQR+G+FAGSG+GKS LL M R+ + ++ L+GERGREVREFIE Sbjct: 119 GVRAINTMLSVGKGQRLGLFAGSGVGKSVLLGMMTRNTSAEITVVGLIGERGREVREFIE 178 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 LG+ ++ +VV+ + +D+ P++R A + IAEYF +G +VLL++DS+TR+A + Sbjct: 179 HSLGEEGMRNAVVIASPADDPPLMRLRASVLCHRIAEYFRDQGKDVLLLMDSLTRYAQAQ 238 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REIA + GE P +GYP SVFS LP+L+ER G + G+ITA +VL +GD+ DPIAD Sbjct: 239 REIALSVGEPPATKGYPPSVFSLLPQLVERAGNGASDGGSITAFYTVLSEGDDQQDPIAD 298 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 + R+ILDGHIVLNR+LAE+G YP +D S+SR + SA+ K + L R+ + Sbjct: 299 AARAILDGHIVLNRALAEQGHYPAIDIEQSISRAMPQIVSAEHLKRAQRVKQLYARYRQV 358 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +++ +GGY+ G D LD AV P I FL+Q+ Sbjct: 359 QELISLGGYQQGADHELDLAVQAYPSICQFLQQT 392 >gi|90406816|ref|ZP_01215008.1| flagellum-specific ATP synthase [Psychromonas sp. CNPT3] gi|90312053|gb|EAS40146.1| flagellum-specific ATP synthase [Psychromonas sp. CNPT3] Length = 443 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 139/318 (43%), Positives = 205/318 (64%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ +GKPIDG + S + + P ++R+ + + GI+ I+ + GQ Sbjct: 102 GRVLDGIGKPIDGKGDIVTAQTSNYTHASINP-LSRKAITEPLDVGIKAINALLTVGQGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FAGSG+GKS LL M R D V++ L+GERGREV+EFIED LG+ K++VV+ Sbjct: 161 RMGLFAGSGVGKSVLLGMMTRGTNADVVVVGLIGERGREVKEFIEDILGEEGRKRAVVIA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R T++TIAEYF +G NVLL++DS+TRFA + REIA GE P +G Sbjct: 221 APADASPLMRLKGCETSLTIAEYFRDQGLNVLLLMDSLTRFAQAQREIALAIGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G + +G+I+A +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGNENQGSISAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G +P +D S+SR+ S + + L L + ++E +++ IG Y G D Sbjct: 341 LADSGHFPAIDVGKSISRVMPMVTSEEHQTLARVLKQAYNLYQENKELITIGAYAKGSDP 400 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +DKA+ P + FL+Q Sbjct: 401 RIDKAIIIRPKLDHFLQQ 418 >gi|189349053|ref|YP_001944681.1| flagellum-specific ATP synthase [Burkholderia multivorans ATCC 17616] gi|189333075|dbj|BAG42145.1| flagellum-specific ATP synthase [Burkholderia multivorans ATCC 17616] Length = 523 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + G Sbjct: 186 GRVVDAAGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 243 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 244 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 303 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 304 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 363 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 364 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 423 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 424 ALAEAGHYPAIDIEASISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRD 483 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 484 AQLDRAIALYPRIEAFLQQ 502 >gi|70729033|ref|YP_258767.1| flagellum-specific ATP synthase [Pseudomonas fluorescens Pf-5] gi|68343332|gb|AAY90938.1| flagellum-specific ATP synthase FliI [Pseudomonas fluorescens Pf-5] Length = 452 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 149/356 (41%), Positives = 212/356 (59%), Gaps = 3/356 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+ +DG ++ D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGAMRAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF++LP+L+ER G +E G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVISP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 D L R+++ RD+ +G Y G D D A+ P + +L+Q +D Sbjct: 376 DNMARAQYFKQLWSRYQQARDLISVGAYVAGGDRDTDTAISLHPAMVAYLRQGLND 431 >gi|170696754|ref|ZP_02887866.1| flagellar protein export ATPase FliI [Burkholderia graminis C4D1M] gi|170138333|gb|EDT06549.1| flagellar protein export ATPase FliI [Burkholderia graminis C4D1M] Length = 555 Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 203/325 (62%), Gaps = 10/325 (3%) Query: 101 W--CGRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 W GRV++A G+P+DG LG LS +++ +NR+ + K G+R I+ Sbjct: 212 WELLGRVLDASGRPLDGLGPLGAHADAPLSAPVINP----LNREPIHKVLDVGVRAINAL 267 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214 + GQR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG+ L Sbjct: 268 LTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGL 327 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +SVV+ A +D SP+LR A + ++AEYF +G +VLL++DS+TR+A + REIA G Sbjct: 328 ARSVVIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVG 387 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 388 EPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDG 447 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+RSLAE G YP +D AS+SR + ++ R++ RD+ +G Sbjct: 448 HIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGA 507 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LD+A+ P + FL+Q Sbjct: 508 YSSGRDALLDRAIALYPRMEAFLQQ 532 >gi|117620954|ref|YP_855907.1| flagellum-specific ATP synthase [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562361|gb|ABK39309.1| flagellar protein export ATPase FliI [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 443 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 203/320 (63%), Gaps = 2/320 (0%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ +G+P+DG + ++ P ++R+ + + G+R I+ + Sbjct: 101 LLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIHQPMDVGVRAINAVLTVGQ 159 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219 GQR+G+FAGSG+GKS LL M R D V++ L+GERGREV+EFIE+ LG+ + +SVV Sbjct: 160 GQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVKEFIEEILGEEGRARSVV 219 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R TA+ IAEYF +G NVLL++DS+TR+A + REIA GE P Sbjct: 220 VAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRYAQAQREIALAVGEPPAT 279 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+ Sbjct: 280 KGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 339 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA+ G YP +D S+SR+ S + +L +L +++ RD+ IG Y G Sbjct: 340 RELADAGHYPAIDIEKSISRVMPMVTSPEHMELARTLKQFYSLYQQNRDLITIGAYSQGS 399 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D +D+A+ Q P + FL+Q Sbjct: 400 DPRIDRAIIQKPYLDQFLQQ 419 >gi|118592622|ref|ZP_01550012.1| type III secretion system ATPase [Stappia aggregata IAM 12614] gi|118434673|gb|EAV41324.1| type III secretion system ATPase [Stappia aggregata IAM 12614] Length = 460 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 159/407 (39%), Positives = 239/407 (58%), Gaps = 8/407 (1%) Query: 17 KNLVVQGGYISSI--TSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KNL G +S + T VY V+ + + + G+ + +V+ + + P Sbjct: 38 KNLYSVNGKVSKVIGTVVYAVVSNVRIGEIVELYTRSTGRKLE--AEVVGFANNEALLYP 95 Query: 75 VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 G + +S V G+ + P GRVI+ G IDG + K P Sbjct: 96 FGETQGVSPQTEVRPTGKVQSVPVGEHLLGRVIDGFGNFIDGKSDECCPQTFYPVYQKPP 155 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 M R+ ++ TGIR ID L GQRIG+FA +G+GKSTLLSM ++ D +++ Sbjct: 156 NPMTRRVIDAPVTTGIRAIDGLLTLGEGQRIGIFAAAGVGKSTLLSMLVKNADVDVTVMA 215 Query: 194 LVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252 +VGERGREV+EFIE LG + +K++V+VV+TSD+SP+ R A A +AEYF +G V Sbjct: 216 MVGERGREVKEFIERELGQEGMKRTVLVVSTSDKSPMERVKASYAATAVAEYFRDQGKKV 275 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 L ++DS+TRFA ++REI +GELP RG+P SVF+ LP+LLER+G + +KG+ITA+ + Sbjct: 276 LFLMDSVTRFARALREIGLAAGELPTRRGFPPSVFASLPKLLERVGMN--DKGSITAMYT 333 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 VLV+GD+ N+P+AD RSILDGHI+L+ LA +P +D L S SR+ D S + ++L Sbjct: 334 VLVEGDDMNEPVADETRSILDGHIILSSKLAAAHHFPAIDILNSKSRVMDMVISDEHREL 393 Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +L+ + + + IG Y+ G D + D AV ++ I +FL+Q Sbjct: 394 AAITRNLLAAYSDVELLVKIGEYQAGSDPVADLAVAKIQDINEFLRQ 440 >gi|170734419|ref|YP_001766366.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia MC0-3] gi|169817661|gb|ACA92244.1| flagellar protein export ATPase FliI [Burkholderia cenocepacia MC0-3] Length = 514 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 206/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + G Sbjct: 174 GRVVDASGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 231 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 232 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 291 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 292 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 351 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 352 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 411 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA--DEKKL--VSSLTHLIHRFEETRDIRLIGGYR 396 +LAE G YP +D AS+SR A +A DE L V ++ R++ RD+ +G Y Sbjct: 412 ALAEAGHYPAIDIEASISR----AMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYA 467 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 PG D LD+A+ P I FL+Q Sbjct: 468 PGRDAQLDRAIALYPRIEAFLQQ 490 >gi|254246922|ref|ZP_04940243.1| ATPase FliI/YscN [Burkholderia cenocepacia PC184] gi|124871698|gb|EAY63414.1| ATPase FliI/YscN [Burkholderia cenocepacia PC184] Length = 514 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 150/323 (46%), Positives = 206/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + G Sbjct: 174 GRVVDASGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 231 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 232 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 291 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 292 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 351 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 352 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 411 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA--DEKKL--VSSLTHLIHRFEETRDIRLIGGYR 396 +LAE G YP +D AS+SR A +A DE L V ++ R++ RD+ +G Y Sbjct: 412 ALAEAGHYPAIDIEASISR----AMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYA 467 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 PG D LD+A+ P I FL+Q Sbjct: 468 PGRDAQLDRAIALYPRIEAFLQQ 490 >gi|54297670|ref|YP_124039.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str. Paris] gi|53751455|emb|CAH12873.1| flagellum-specific ATP synthase FliI [Legionella pneumophila str. Paris] Length = 449 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 151/361 (41%), Positives = 223/361 (61%), Gaps = 3/361 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + VY+ +G + I+ G + GR ++S GR++N G ID D Sbjct: 63 EVVGFSNESVYLMSIGDIQGIAPGMKIIPTGRIAQVSVGHQLLGRILNGSGMFID-DGPP 121 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + ++ +V + R +E GIR I+ + GQRIG+FAGSG+GKS LL Sbjct: 122 SEMVETYPLIGQVINPLKRAPIEVPLDVGIRAINGLLTVGRGQRIGLFAGSGVGKSVLLG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M R D V++ L+GERGREV+EFIE LG LK++VVV A +DESP++R A Sbjct: 182 MMTRFTEADVVVVGLIGERGREVKEFIECNLGLQGLKRAVVVAAPADESPLMRLHGAKVA 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +IAEYF +G +VLL++DS+TRFA + REIA + GE P +GYP SVF++LP+L+ER G Sbjct: 242 TSIAEYFRDQGKHVLLLIDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R+LAE+G+YP +D AS+S Sbjct: 302 NGTSGGGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRALAEQGQYPAIDLEASIS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ S K + + +E+ +D+ L+G Y G D ++DKA+ V + D+L Sbjct: 362 RVMQGVVSEQHMKDMLLFKKYLSVYEKNKDLILLGAYAKGSDPLVDKAILAVNKLKDYLA 421 Query: 419 Q 419 Q Sbjct: 422 Q 422 >gi|220929465|ref|YP_002506374.1| ATPase FliI/YscN [Clostridium cellulolyticum H10] gi|219999793|gb|ACL76394.1| ATPase FliI/YscN [Clostridium cellulolyticum H10] Length = 437 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 163/419 (38%), Positives = 244/419 (58%), Gaps = 8/419 (1%) Query: 25 YISSITSVY-YTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 YI ++ V T+ V +GD +H S +V+ + V + P+G I Sbjct: 21 YIGKVSKVVGLTIESDGPQVSIGDLCNIHIIGGSKLKAEVVGFKDEKVLLMPLGEMTGIG 80 Query: 83 LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 G V G +++ GRV++ LG PID SL + + +K P + R+R+ Sbjct: 81 PGSTVSANGDILKVAVGPQLVGRVLDGLGNPIDDKGSL-QSKHYYKTDNKPPNPLTRKRI 139 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 + G+R ID + GQR+G+FAGSG+GKSTL+ M AR+ D +I+L+GERGRE Sbjct: 140 SEPLPLGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMVARNTKADINVIALIGERGRE 199 Query: 202 VREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 VREF+E D + L +SVVVVATSD+ ++R + A IAEYF G +VLL++DS+T Sbjct: 200 VREFLERDLTDEGLARSVVVVATSDQPALIRLKGAMVATAIAEYFRDCGKDVLLLMDSLT 259 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+A + RE+ + GE PV+RGY SVFS P+LLER G S +KG+IT + +VLVDGD+ Sbjct: 260 RYAMAQREVGLSIGEPPVSRGYTPSVFSVFPKLLERAGTS--DKGSITGLYTVLVDGDDL 317 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 +P+ D+ R ILDGHIVL+RS+A + YP +D LASVSR+ + KK + + ++ Sbjct: 318 TEPVTDTARGILDGHIVLSRSMANKNHYPAIDVLASVSRVMGDIIDKEHKKSANEIKKVM 377 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438 ++ D+ IG Y G + +D A+ + I FL+Q + +S ED+ ++ L+ Sbjct: 378 AVHRDSEDLINIGAYVKGSNEKIDYAIECIEDITSFLQQETDEKVSFEDIHSQVLSLLK 436 >gi|89056690|ref|YP_512141.1| ATPase FliI/YscN [Jannaschia sp. CCS1] gi|88866239|gb|ABD57116.1| H+-transporting two-sector ATPase flagellum-specific [Jannaschia sp. CCS1] Length = 440 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 151/386 (39%), Positives = 221/386 (57%), Gaps = 5/386 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G IS++ +V+ L + LGD V N+D G+++ + + P G + + L Sbjct: 22 GKISAMGRDVVSVSGLDRVASLGDRVRF---NADATGEILAMEAGRARVMPDGPADGLRL 78 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 G V H G ISP W GRVI+ G+P+DG L G ++ ++S P R+ + Sbjct: 79 GADVTHLGPASISPDDSWLGRVIDPDGQPLDGRAIL-PGPVAYPLVSPPPSPAARRGLGA 137 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 +TG V D P+ GQR+G+FAGSG+GKS L + A D V+I L+GERGREVR Sbjct: 138 RLQTGFAVFDTLLPIVRGQRVGLFAGSGVGKSRLTAALADGMAADVVVIGLIGERGREVR 197 Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 +F+ + LG + L +SVV+ ATSD + R A T + +AE+F ++G NV+++ DSITRF Sbjct: 198 DFVSETLGPEGLARSVVIAATSDRPALTRARAAYTMMAVAEFFRNQGRNVIVLADSITRF 257 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A + R++A +GE G+P S+ + L ER GP +G+ITA+ SVLV G + + Sbjct: 258 AEAQRDVAAAAGEPFGPSGFPASMAQTIMALAERAGPGSGTQGDITAIFSVLVAGSDMDG 317 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 P+AD +R LDGHIVL R +AE GRYP +D L SVSR A S +E +++ L+ Sbjct: 318 PVADVMRGTLDGHIVLTREIAERGRYPAIDLLRSVSRSLPNAASDEENRMILRARQLMGA 377 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVH 408 ++ + G Y PG D + D AV Sbjct: 378 YDRAEMMLQAGLYTPGADPLTDGAVK 403 >gi|167579436|ref|ZP_02372310.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis TXDOH] Length = 521 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 146/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+D L K D + S P ++R+ + G+R I+ + G Sbjct: 181 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 238 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 239 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 298 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A T+AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 299 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 358 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 359 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 418 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR + V ++ R++ RD+ +G Y PG D Sbjct: 419 SLAEAGHYPAIDIEASISRAMTALIDDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRD 478 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 479 AQLDRAIALYPRIESFLQQ 497 >gi|150019077|ref|YP_001311331.1| flagellar protein export ATPase FliI [Clostridium beijerinckii NCIMB 8052] gi|149905542|gb|ABR36375.1| flagellar protein export ATPase FliI [Clostridium beijerinckii NCIMB 8052] Length = 438 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 151/325 (46%), Positives = 207/325 (63%), Gaps = 4/325 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G +I+ LG P+D D S+ + + P + R+R+++ TG+R ID F GQ Sbjct: 104 GHIIDGLGNPLDCD-SISMDGEEYPLENDAPDPLKRKRIKEIMPTGVRAIDGFLTCGDGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKST L M AR D +ISL+GERGREV EFIE LG + +KKSVVV Sbjct: 163 RIGIFAGSGVGKSTTLGMIAREAKADVNVISLIGERGREVLEFIEKDLGPEGMKKSVVVC 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+ ++R LTA IAEYF KG V+L++DS+TRFA + RE+ GE P +G Sbjct: 223 ATSDKPALIRIKGALTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF++LP+L+ER G S G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+RS Sbjct: 283 YTPSVFAKLPKLMERSGTSAD--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRS 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA + YP +D L SVSRL + + K+ S L+ ++++ D+ IG Y G + Sbjct: 341 LAHKNHYPAIDILNSVSRLMNTIAPKEHKEAASMARDLLATYKDSEDLINIGAYVKGSNK 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426 +D A++ + DFL Q + +S Sbjct: 401 KIDMAINYNDSLNDFLCQGIDERTS 425 >gi|221201936|ref|ZP_03574973.1| flagellar protein export ATPase FliI [Burkholderia multivorans CGD2M] gi|221207557|ref|ZP_03580565.1| flagellar protein export ATPase FliI [Burkholderia multivorans CGD2] gi|221172403|gb|EEE04842.1| flagellar protein export ATPase FliI [Burkholderia multivorans CGD2] gi|221178356|gb|EEE10766.1| flagellar protein export ATPase FliI [Burkholderia multivorans CGD2M] Length = 527 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + G Sbjct: 190 GRVVDAAGRPLDGLGPLASKVDAPLSAPSINP--LDREPIHHVLDVGVRAINALLTVGRG 247 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 248 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 307 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 308 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 367 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 368 GYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 427 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 428 ALAEAGHYPAIDIEASISRAMTALIDDTHLDRVRHFKQMLSRYQRNRDLIAVGAYAPGRD 487 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 488 AQLDRAIALYPRIEAFLQQ 506 >gi|153836244|ref|ZP_01988911.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio parahaemolyticus AQ3810] gi|149750519|gb|EDM61264.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio parahaemolyticus AQ3810] Length = 440 Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 152/357 (42%), Positives = 213/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G++++ LG+P DG S + + Sbjct: 88 VSPMGKMHEVGVGDHLL--------------GKILDGLGRPFDGAQSQ-EPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG D + +SV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ D + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPGIDVLRSASRVMNQIVEPDHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + L ++ ++EE + IG Y+ G D D A+ Q I FL+Q PSDL Sbjct: 371 ASAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRAFLRQGTHEPSDL 427 >gi|254228246|ref|ZP_04921675.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio sp. Ex25] gi|262394137|ref|YP_003285991.1| Type III secretion cytoplasmic ATP synthase [Vibrio sp. Ex25] gi|151939319|gb|EDN58148.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio sp. Ex25] gi|262337731|gb|ACY51526.1| Type III secretion cytoplasmic ATP synthase [Vibrio sp. Ex25] Length = 440 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 152/357 (42%), Positives = 211/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G ++ LG+P DG S + + Sbjct: 88 VSPMGKMHEVGVGDQLL--------------GTTLDGLGRPFDGTQSQ-EPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG+ + KSV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ D + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPDHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + L ++ ++EE + IG Y+ G D D A+ Q I FL+Q PSDL Sbjct: 371 ASAAHLREMLAKYEEVELLLKIGEYQHGADSRADMAIAQSDDIRAFLRQGTHEPSDL 427 >gi|330976000|gb|EGH76066.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 452 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 148/352 (42%), Positives = 210/352 (59%), Gaps = 3/352 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISRPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +E G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + L R+++TRD+ +G Y G D D A+ P++ + +Q Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQ 427 >gi|298487832|ref|ZP_07005872.1| Flagellum-specific ATP synthase fliI [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298157557|gb|EFH98637.1| Flagellum-specific ATP synthase fliI [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 457 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 148/352 (42%), Positives = 210/352 (59%), Gaps = 3/352 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +E G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + L R+++TRD+ +G Y G D D A+ P++ + +Q Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQ 427 >gi|330972439|gb|EGH72505.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 343 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 141/319 (44%), Positives = 200/319 (62%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G+P+DG + D + P + R + + GIR I+ + GQ Sbjct: 2 GRVLDGAGRPLDGRSPIKAEDWVPMDGPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQ 60 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FAG+G+GKS LL M R D +++ L+GERGREV+EFIE LG+ LK+SVVV Sbjct: 61 RLGLFAGTGVGKSVLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVA 120 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 + +D++P++R A + IAEYF KG NVLL++DS+TRFA + REIA GE P +G Sbjct: 121 SPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKG 180 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LP+L+ER G +EK G+ITA +VL +GD+ DPIADS R +LDGHIVL+R Sbjct: 181 YPPSVFARLPKLVERAGNAEKGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRR 240 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAEEG YP +D AS+SR+ S + L R+++TRD+ +G Y G D Sbjct: 241 LAEEGHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDR 300 Query: 402 ILDKAVHQVPIIYDFLKQS 420 D A+ P++ + +Q+ Sbjct: 301 ETDMAIALHPVLVRYQRQA 319 >gi|91224474|ref|ZP_01259736.1| type III secretion system ATPase [Vibrio alginolyticus 12G01] gi|91190816|gb|EAS77083.1| type III secretion system ATPase [Vibrio alginolyticus 12G01] Length = 440 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G ++ LG+P DG S + + Sbjct: 88 VSPMGKMHEVGVGDHLL--------------GTTLDGLGRPFDGTQSQ-EPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAEVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG+ + KSV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ D + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPDHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + + ++ ++EE + IG Y+ G D + D A+ Q I FL+Q PSDL Sbjct: 371 ASAAHIREMLAKYEEVELLIKIGEYQHGADSLADMAIAQSDDIRAFLRQGTHEPSDL 427 >gi|83719073|ref|YP_440755.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis E264] gi|257140596|ref|ZP_05588858.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis E264] gi|83652898|gb|ABC36961.1| flagellum-specific ATP synthase FliI [Burkholderia thailandensis E264] Length = 509 Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 146/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+D L K D + S P ++R+ + G+R I+ + G Sbjct: 169 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 226 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 227 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 286 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A T+AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 287 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 346 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 347 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 406 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR + V ++ R++ RD+ +G Y PG D Sbjct: 407 SLAEAGHYPAIDIEASISRAMTALIDDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRD 466 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 467 AQLDRAIALYPRIESFLQQ 485 >gi|323527695|ref|YP_004229848.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1001] gi|323384697|gb|ADX56788.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1001] Length = 565 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 142/322 (44%), Positives = 201/322 (62%), Gaps = 4/322 (1%) Query: 101 W--CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 W GRV++A G+P+DG LG + + V +NR+ + K G+R I+ + Sbjct: 222 WELLGRVLDASGRPLDGLGPLG-AQTDAPLSAPVINPLNREPIHKVLDVGVRAINALLTV 280 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKS 217 GQR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG+ L +S Sbjct: 281 GRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARS 340 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VV+ A +D SP+LR A + ++AEYF +G +VLL++DS+TR+A + REIA GE P Sbjct: 341 VVIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVGEPP 400 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIV Sbjct: 401 ATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIV 460 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+RSLAE G YP +D AS+SR + ++ R++ RD+ +G Y Sbjct: 461 LSRSLAEAGHYPAIDIEASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGAYSS 520 Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419 G D +LD+A+ P + FL+Q Sbjct: 521 GRDALLDRAIALYPRMEAFLQQ 542 >gi|312111676|ref|YP_003989992.1| ATPase, FliI/YscN family [Geobacillus sp. Y4.1MC1] gi|311216777|gb|ADP75381.1| ATPase, FliI/YscN family [Geobacillus sp. Y4.1MC1] Length = 426 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 154/361 (42%), Positives = 219/361 (60%), Gaps = 5/361 (1%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P + IS G +V G+ +I G+V+++LG P+DG L KG + I Sbjct: 56 VLLMPFSTVQHISPGCIVEATGKPLQIRVGFPLIGKVLDSLGYPLDGS-PLSKGLQPISI 114 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 P + R + + + G+RVID + GQR+G+FAGSG+GKSTL+ M AR D Sbjct: 115 ERNPPNPLARPPISEPIEVGVRVIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARHTNAD 174 Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+L+GERGREVREFIE LG + L +S+VVVATSD+ ++R TA IAEYF Sbjct: 175 INVIALIGERGREVREFIERDLGPEGLARSIVVVATSDQPALMRVKGAYTATAIAEYFRD 234 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G +V+ ++DS+TR A + REI GE P +GY SVF+ LP+LLER G G I Sbjct: 235 QGMDVMFMMDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFAILPKLLERTG--TNACGTI 292 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VLVDGD+ N+PIAD+VR ILDGH VL RSLA +G+YP ++ L SVSR+ + S Sbjct: 293 TAFYTVLVDGDDMNEPIADTVRGILDGHFVLERSLANKGQYPAINVLKSVSRVMNHIISP 352 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 + ++ L L+ + + D+ IG Y+ G +D+A+ P I F KQ + +++ Sbjct: 353 EHRQAADKLRQLLSTYINSEDLINIGAYKRGSSKEIDEAIRYYPEIISFCKQDIDEKATK 412 Query: 428 D 428 D Sbjct: 413 D 413 >gi|182418359|ref|ZP_02949654.1| flagellar protein export ATPase FliI [Clostridium butyricum 5521] gi|237666511|ref|ZP_04526496.1| flagellar protein export ATPase FliI [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377741|gb|EDT75285.1| flagellar protein export ATPase FliI [Clostridium butyricum 5521] gi|237657710|gb|EEP55265.1| flagellar protein export ATPase FliI [Clostridium butyricum E4 str. BoNT E BL5262] Length = 438 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 152/331 (45%), Positives = 210/331 (63%), Gaps = 4/331 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G +I+ LGKP+D + GD + ++ P M R+R+++ TG+R ID F + GQ Sbjct: 104 GHIIDGLGKPLDCESLEYDGD-DYPLENEAPDPMKRKRIKEIMPTGVRAIDGFLTVGDGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKST L M AR D +ISL+GERGREV EF+E LG + +KKSVVV Sbjct: 163 RIGIFAGSGVGKSTTLGMIAREAKADVNVISLIGERGREVLEFMEKDLGPEGMKKSVVVC 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+ ++R LTA IAEYF +G V+L++DS+TR+A + RE+ GE P +G Sbjct: 223 ATSDKPALIRMKGALTATAIAEYFRDQGKKVILMMDSVTRYAMAQREVGLAIGEPPATKG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF++LP+L+ER G S G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R Sbjct: 283 YTPSVFAKLPKLMERAGTS--MDGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRD 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA + YP +D L SVSRL + D K S L+ ++++ D+ IG Y G + Sbjct: 341 LAHKNHYPAIDVLNSVSRLMSQIAPKDHKDSASLARDLLATYKDSEDLINIGAYVKGSNK 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 +D AV + +FL Q + +S D Q+ Sbjct: 401 KIDMAVAYNDKLNNFLCQGIDEKTSFDETQQ 431 >gi|91785614|ref|YP_560820.1| ATPase FliI/YscN [Burkholderia xenovorans LB400] gi|91689568|gb|ABE32768.1| ATPase FliI/YscN [Burkholderia xenovorans LB400] Length = 552 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 204/325 (62%), Gaps = 10/325 (3%) Query: 101 W--CGRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 W GRV++A G+P+DG LG LS +++ +NR+ + K G+R I+ Sbjct: 209 WELLGRVLDASGRPLDGLGPLGAHADAPLSAPVINP----LNREPIHKVLDVGVRAINAL 264 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214 + GQR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG+ L Sbjct: 265 LTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGL 324 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +SVV+ A +D SP+LR A + ++AEYF +G +VLL++DS+TR+A + REIA G Sbjct: 325 ARSVVIAAPADVSPLLRMQAASYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVG 384 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 385 EPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDG 444 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+RSLAE G YP +D AS+SR + + ++ R++ RD+ +G Sbjct: 445 HIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLEKTRMFKQMLSRYQRNRDLINVGA 504 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LD+A+ P + FL+Q Sbjct: 505 YSSGRDALLDRAIALYPRMEAFLQQ 529 >gi|74101650|gb|AAZ99740.1| FliIL [Aeromonas hydrophila] Length = 443 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 157/382 (41%), Positives = 227/382 (59%), Gaps = 6/382 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117 L +V+ N DI Y+ P+ + G V G I GRV++ L +P+DG Sbjct: 60 LAEVVGFNRDISYLMPLQPMSGLYAGARVLPIDGEETIQVGEHLLGRVVDGLLQPLDGRP 119 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G+ + + + P + R V + GIR I+ + GQR+G+FAGSG+GKS L Sbjct: 120 LRDDGE-RVALFASPPNPLLRTPVREPLDVGIRAINGLLTVGKGQRLGLFAGSGVGKSML 178 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 L M R+ V++ L+GERGREVREFIE LG + L ++VVV A +D+SP++R A Sbjct: 179 LGMMTRNTTAQIVVVGLIGERGREVREFIEHSLGPEGLARAVVVAAPADQSPLMRLRAAQ 238 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 IAEYF +G +VLL++DS+TR+A + REIA GE P RGYP SVFS L +L+ER Sbjct: 239 LCHRIAEYFREQGRDVLLLMDSLTRYAQAQREIALAIGEPPATRGYPPSVFSMLTQLVER 298 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G G+++A +VL +GD+ DP+ D+ R+ILDGHIVL R LAEEG YP +D AS Sbjct: 299 AGNGTHPDGSLSAFYTVLAEGDDQQDPVVDAARAILDGHIVLTRRLAEEGHYPAIDIGAS 358 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ + A+ + L +L L R+++ R++ +GGY+PG D +D+AV + P I F Sbjct: 359 VSRVMPQVVPAEWQTLAVTLRQLWGRYQQVRELLPLGGYQPGADPQMDEAVQRYPAIAAF 418 Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438 L+Q + E F ++ L+ Sbjct: 419 LQQG---IHEETPFAQVMTGLK 437 >gi|311030127|ref|ZP_07708217.1| flagellum-specific ATP synthase [Bacillus sp. m3-13] Length = 437 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 146/339 (43%), Positives = 216/339 (63%), Gaps = 6/339 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHG 161 G+V++ALGKP++ ++ L G L + PP M R + + + G++VID + G Sbjct: 102 GKVLDALGKPLNQEEELPVG-LGKYPTDQAPPNPMTRPSITEELEVGVKVIDGLLTVGKG 160 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKSTLL M AR+ D +I+L+GERGREVR+F+E LG + L +S+V+ Sbjct: 161 QRVGIFAGSGVGKSTLLGMIARNTHADINVIALIGERGREVRDFLERDLGPEGLSRSIVI 220 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 VATSD+ ++R TA I+EYF G NV+L++DS+TR A + RE+ GE P + Sbjct: 221 VATSDQPALMRIKGAYTATAISEYFRDMGYNVMLMMDSVTRVAMAQREVGLAVGEPPTTK 280 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GY SVFS LP+LLER G ++ G+ITA +VLVDGD+ N+PIAD+VR ILDGH VL+R Sbjct: 281 GYTPSVFSMLPKLLERTGTNQH--GSITAFYTVLVDGDDMNEPIADTVRGILDGHFVLDR 338 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LA +G+YP ++ L SVSR+ + + K+ S+ + ++ + D+ IG Y+ G Sbjct: 339 DLANKGQYPAINVLKSVSRVMNHIVDNEHKRAAESMREKLSKYYQAEDLINIGAYKRGSS 398 Query: 401 LILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438 +D A+ P I ++LKQ D D +E+T ++ Sbjct: 399 REIDDAIQSYPAIINYLKQEVDDSWKFTDTKKELTNLMK 437 >gi|238782824|ref|ZP_04626853.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970] gi|238716247|gb|EEQ08230.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970] Length = 424 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 156/380 (41%), Positives = 225/380 (59%), Gaps = 14/380 (3%) Query: 51 HQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHW---------GRFRISPSAC 100 ++G +D + +V+ N +I+Y+ P+ + I G V+ + + + P Sbjct: 21 NRGNGTDKIESEVVGFNGEILYLMPLENVDGILPGARVYAFESGAGITKGKQLPLGPE-- 78 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A +P+DG G V P + R ++ G+R I+ + Sbjct: 79 LLGRVLDASARPLDGLPPPGCAKHGSLFTQPVNPLL-RDPIKHVLDVGVRAINGLLTVGR 137 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG+ + +SVV Sbjct: 138 GQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGEEGRTRSVV 197 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 + A +D SPILR + A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 198 IAAPADVSPILRMQGAVYATRIAEDFRDRGMDVLLIMDSLTRYAMAQREIALAIGEPPAT 257 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G KE G+ITA +VL +GD+ DPIADS R+ILDGHIVL+ Sbjct: 258 KGYPPSVFAKLPALVERAGNGVKEGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLS 317 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LAE G YP +D AS+SR + A K V S L+ ++ RD+ +G Y G Sbjct: 318 RRLAESGHYPAIDIEASISRAMTELIDATHYKKVQSFKQLLSSYQRNRDLVSVGAYAAGS 377 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + FL+Q Sbjct: 378 DPLLDKAIRLYPDMERFLQQ 397 >gi|299069237|emb|CBJ40497.1| type III secretion system ATPase [Ralstonia solanacearum CMR15] Length = 439 Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 144/336 (42%), Positives = 207/336 (61%), Gaps = 4/336 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG+P DG L D + + + P M R+ VE TG+RVID L GQ Sbjct: 104 GRVLDGLGRPADGGPPLEVVDY-VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FA +G+GKSTL+ MFAR D +I L+GERGREVREFIE LG + +++SVVV Sbjct: 163 RMGIFAPAGVGKSTLMGMFARGTDCDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVC 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD S + R A +AEYF +G VLL++DS+TRFA + REI +GE P RG Sbjct: 223 ATSDRSAVERAKAAYVGTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF+ELPRLLER G S G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R Sbjct: 283 FPPSVFAELPRLLERAGMS--AAGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRD 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A RYP +D L+S+SR+ + + + L+ ++ E + +G Y+ G D Sbjct: 341 IAARNRYPAIDILSSLSRVMTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDP 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 + D AV + FL+Q + S D + + +++ Sbjct: 401 VADAAVQWNDWMESFLRQRTDEWCSPDETRRLLEEI 436 >gi|39995521|ref|NP_951472.1| flagellum-specific ATP synthase FliI [Geobacter sulfurreducens PCA] gi|39982284|gb|AAR33745.1| flagellum-specific ATP synthase FliI [Geobacter sulfurreducens PCA] Length = 441 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 157/389 (40%), Positives = 226/389 (58%), Gaps = 6/389 (1%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVIN 107 +VH +V+ + + P+G + LG L+ + + GRVI+ Sbjct: 47 LVHPNDGDPIPAEVVGFRDNKTLLMPLGELRGVGLGSLISVKRKKASLGVGPGLLGRVID 106 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG PID L + + V P M R+ + + GIR I+ GQR+G+ Sbjct: 107 GLGVPIDDKGPLAIREEYPIYANPVNP-MKRRPIRQPLDLGIRAINALLTCGEGQRVGIM 165 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDE 226 AGSG+GKSTLL M AR D +I+L+GERGRE+REFIE D + LKKSVVVVATSD+ Sbjct: 166 AGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQ 225 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 P++R A TIAEYF ++G VLL++DS TRFA ++RE+ GE P +GY SV Sbjct: 226 PPLVRMRGAYIATTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSV 285 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F+ LP+LLER G G+IT + +VLV+GD+ N+PI+D++RSILDGHIVLNR LA Sbjct: 286 FAALPKLLERTG--SFLDGSITGLYTVLVEGDDFNEPISDAMRSILDGHIVLNRELAARA 343 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YPP+D LAS SR+ + +++ S L+ + + D+ IG Y+PG + +D A Sbjct: 344 IYPPLDILASASRVMNDVTERSQQQFASRFKELLAAYRQAEDLINIGAYKPGSNPTIDYA 403 Query: 407 VHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434 + ++ + +F++Q D +S E E+ Sbjct: 404 IAKMDGMINFIRQGIHDGVSMEQSIAELA 432 >gi|307731345|ref|YP_003908569.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1003] gi|307585880|gb|ADN59278.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1003] Length = 576 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 203/325 (62%), Gaps = 10/325 (3%) Query: 101 W--CGRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 W GRV++A G+P+DG LG LS +++ +NR+ + K G+R I+ Sbjct: 233 WELLGRVLDASGRPLDGLGPLGAHADAPLSAPVINP----LNREPIHKVLDVGVRAINAL 288 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214 + GQR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG+ L Sbjct: 289 LTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGL 348 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +SVV+ A +D SP+LR A + ++AEYF +G +VLL++DS+TR+A + REIA G Sbjct: 349 ARSVVIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVG 408 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 409 EPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDG 468 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+RSLAE G YP +D AS+SR + ++ R++ RD+ +G Sbjct: 469 HIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGA 528 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LD+A+ P + FL+Q Sbjct: 529 YSSGRDALLDRAIALYPRMEAFLQQ 553 >gi|296157435|ref|ZP_06840270.1| flagellar protein export ATPase FliI [Burkholderia sp. Ch1-1] gi|295892207|gb|EFG71990.1| flagellar protein export ATPase FliI [Burkholderia sp. Ch1-1] Length = 552 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 204/325 (62%), Gaps = 10/325 (3%) Query: 101 W--CGRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 W GRV++A G+P+DG LG LS +++ +NR+ + K G+R I+ Sbjct: 209 WELLGRVLDASGRPLDGLGPLGAHADAPLSAPVINP----LNREPIHKVLDVGVRAINAL 264 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214 + GQR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG+ L Sbjct: 265 LTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGL 324 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +SVV+ A +D SP+LR A + ++AEYF +G +VLL++DS+TR+A + REIA G Sbjct: 325 ARSVVIAAPADVSPLLRMQAASYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVG 384 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 385 EPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDG 444 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+RSLAE G YP +D AS+SR + + ++ R++ RD+ +G Sbjct: 445 HIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLEKTRMFKQMLSRYQRNRDLINVGA 504 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LD+A+ P + FL+Q Sbjct: 505 YSSGRDALLDRAIALYPRMEAFLQQ 529 >gi|298504521|gb|ADI83244.1| flagellum-specific ATPase FliI [Geobacter sulfurreducens KN400] Length = 441 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 157/389 (40%), Positives = 226/389 (58%), Gaps = 6/389 (1%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVIN 107 +VH +V+ + + P+G + LG L+ + + GRVI+ Sbjct: 47 LVHPNDGDPIPAEVVGFRDNKTLLMPLGELRGVGLGSLISVKRKKASLGVGPGLLGRVID 106 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG PID L + + V P M R+ + + GIR I+ GQR+G+ Sbjct: 107 GLGVPIDDKGPLAIREEYPIYANPVNP-MKRRPIRQPLDLGIRAINALLTCGEGQRVGIM 165 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDE 226 AGSG+GKSTLL M AR D +I+L+GERGRE+REFIE D + LKKSVVVVATSD+ Sbjct: 166 AGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQ 225 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 P++R A TIAEYF ++G VLL++DS TRFA ++RE+ GE P +GY SV Sbjct: 226 PPLVRMRGAYIATTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSV 285 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F+ LP+LLER G G+IT + +VLV+GD+ N+PI+D++RSILDGHIVLNR LA Sbjct: 286 FAALPKLLERTG--SFLDGSITGLYTVLVEGDDFNEPISDAMRSILDGHIVLNRELAARA 343 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YPP+D LAS SR+ + +++ S L+ + + D+ IG Y+PG + +D A Sbjct: 344 IYPPLDILASASRVMNDVTERSQQQFASRFKELLAAYRQAEDLINIGAYKPGSNPTIDYA 403 Query: 407 VHQVPIIYDFLKQSPSD-LSSEDVFQEIT 434 + ++ + +F++Q D +S E E+ Sbjct: 404 IAKMDGMVNFIRQGIHDGVSMEQSIAELA 432 >gi|237653565|ref|YP_002889879.1| ATPase, FliI/YscN family [Thauera sp. MZ1T] gi|237624812|gb|ACR01502.1| ATPase, FliI/YscN family [Thauera sp. MZ1T] Length = 464 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 5/339 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L + + + + + R + + G+R I+ + Sbjct: 125 ALLGRVVDGAGRPLDGQGPLHTQE-TRSLQGRAINPLARAPIAQPLDVGVRAINALLTVG 183 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS L+ M AR + +++ L+GERGREV+EFI+ LG + L +SV Sbjct: 184 RGQRLGLFAGSGVGKSVLIGMMARYTEAEVIVVGLIGERGREVKEFIDHSLGPEGLARSV 243 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP++R A T+AEYF +G VLLI+DS+TR+A + REIA GE PV Sbjct: 244 VVAAPADTSPLMRMQGAAYATTVAEYFRDQGKQVLLIMDSLTRYAMAQREIALAIGEPPV 303 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGYP SVF+ LP L+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDGH VL Sbjct: 304 TRGYPPSVFARLPALVERAGNGPEGGGSITAFYTVLAEGDDQQDPIADAARAILDGHFVL 363 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R+LA++G YP +D S+SR D +V R++ +RD+ +G Y+PG Sbjct: 364 SRNLADQGHYPAIDIEQSISRAMHNLVGDDHFNVVRQFKQFFSRYQRSRDLIAVGAYQPG 423 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D +LD AV P + FL+Q + + ++ +KL Sbjct: 424 GDPLLDMAVKLYPRLEAFLQQG---IQEHETYEGALQKL 459 >gi|325920571|ref|ZP_08182493.1| ATPase FliI/YscN family [Xanthomonas gardneri ATCC 19865] gi|325548964|gb|EGD19896.1| ATPase FliI/YscN family [Xanthomonas gardneri ATCC 19865] Length = 460 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 206/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + G+G +SM +S P + R+ + G+R I+ P+ G Sbjct: 121 GRVIDSDGTPLDGKGPIRGEGSVSMAGVSINP--LAREPITTSLDVGVRAINALLPIGRG 178 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 179 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 238 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 239 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 298 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 299 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 358 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD W + + L L+ + RD+ IG Y+ Sbjct: 359 RVADSGLYPAIDVESSVSRVVQDIADDTW----RLRIRKLKRLLSAYSSNRDLIAIGAYQ 414 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D D+A+ + P I +FL Q Sbjct: 415 RGSDPATDEALARWPDIVEFLGQ 437 >gi|300311372|ref|YP_003775464.1| flagellum-specific ATP synthase [Herbaspirillum seropedicae SmR1] gi|300074157|gb|ADJ63556.1| flagellum-specific ATP synthase protein [Herbaspirillum seropedicae SmR1] Length = 468 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 142/318 (44%), Positives = 198/318 (62%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G+P+D L + S + + + R + TGIR I+ + GQ Sbjct: 132 GRVLDGAGRPLDNLGPL-HTERSAPLAVRAANPLGRAPIRDILDTGIRAINSMLTVGRGQ 190 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SVVV Sbjct: 191 RMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIEQILGAEGLARSVVVA 250 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D P++R +IAEYF +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 251 APADTPPLMRLQGAAYCTSIAEYFRDQGKDVLLIMDSLTRYAMAQREIALAIGEPPATKG 310 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G ++ G+ITA +VL +GD+ DPIAD+ R+ILDGHIVLNR Sbjct: 311 YPPSVFAKLPALVERAGNGDEGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLNRQ 370 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D S+SR A+ ++ L L RF+ RD+ +G Y G D Sbjct: 371 LAEAGHYPAIDIEQSISRAMHSITDAEHQRSSRHLKQLYSRFQRNRDLISVGAYAAGSDP 430 Query: 402 ILDKAVHQVPIIYDFLKQ 419 ILD+A+ +P + FL+Q Sbjct: 431 ILDEAIALLPRMEAFLQQ 448 >gi|317129206|ref|YP_004095488.1| ATPase, FliI/YscN family [Bacillus cellulosilyticus DSM 2522] gi|315474154|gb|ADU30757.1| ATPase, FliI/YscN family [Bacillus cellulosilyticus DSM 2522] Length = 437 Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 146/352 (41%), Positives = 221/352 (62%), Gaps = 5/352 (1%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P EI+ G LV + +I G+V++ LG+P+D + L G + Sbjct: 67 VLLMPFDATTEIAPGSLVEATNKPLQIKIGTSLVGQVVDGLGRPLDHTE-LKNGLTNFPT 125 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R R+ + GIR ID + GQRIG+FAGSG+GKSTL++M A++ D Sbjct: 126 DNTPPNPLKRPRITEALSLGIRAIDGLFTVGKGQRIGIFAGSGVGKSTLMAMIAKNSEAD 185 Query: 189 KVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+L+GERGREVR+F+E D D LK ++VVVATSD+ ++R +TA IAE+F + Sbjct: 186 INVIALIGERGREVRDFVERDLNEDGLKNTIVVVATSDQPALMRIKGAMTATAIAEFFRN 245 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G NV L++DS+TR A + REI GE P +GY SVF+ LP+LLER G +E G I Sbjct: 246 QGLNVNLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFATLPKLLERSGTNEY--GTI 303 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VLVDGD+ N+PIAD+VR ILDGH+VL+R LA +G++P ++ L S+SRL + + Sbjct: 304 TAFYTVLVDGDDLNEPIADTVRGILDGHLVLDRKLANKGQFPAINVLTSISRLMNDLVTP 363 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + K + + + ++ ++ D+ IG Y+ G + LD+A+ P + +++KQ Sbjct: 364 EHKLAADKVRNYLSQYYDSEDLISIGAYKRGTNKDLDEAIKLYPQVINYIKQ 415 >gi|134281964|ref|ZP_01768670.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 305] gi|134246493|gb|EBA46581.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 305] Length = 442 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 168/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%) Query: 5 LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59 L L+++A+ + L ++ G + V T V + LG+ +G + + Sbjct: 4 LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG Sbjct: 64 AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 124 LDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+ITA+ +VL + D+ +DPIA+ VR ILDGHIVL+R +A +YP +D L S+ Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIVLSREIAARNQYPAIDVLGSL 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420 Query: 418 KQSPSDLSSED 428 Q + S D Sbjct: 421 NQRTDEYSPPD 431 >gi|146307844|ref|YP_001188309.1| flagellum-specific ATP synthase [Pseudomonas mendocina ymp] gi|145576045|gb|ABP85577.1| flagellar protein export ATPase FliI [Pseudomonas mendocina ymp] Length = 448 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 146/355 (41%), Positives = 215/355 (60%), Gaps = 7/355 (1%) Query: 70 VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 +Y+ PVG I+ G V GR + S GRV++ G+ +DG + D Sbjct: 77 IYLMPVGSLAGIAPGARVVPLPDAGRLPMGMS--MLGRVLDGAGRALDGKGGMKAEDWVP 134 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + P +NR + + GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 135 VDGPAINP-LNRDPISQPLDVGIRTINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193 Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 + +++ L+GERGREV+EFI++ LG + LK+SVVV + +D++P++R A IAEYF Sbjct: 194 AEIIVVGLIGERGREVKEFIDEILGAEGLKRSVVVASPADDAPLMRLRAAQYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TR+A + REIA GE P +GYP SVF++LPRL+ER G E G Sbjct: 254 RDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPRLVERAGNGEAGGG 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIAD+ R +LDGH VL+R LAEEG YP +D +S+SR+ + Sbjct: 314 SITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAIDIESSISRVMPQVV 373 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 ++ K L R++++RD+ +G Y PG D D A+ + P + +L+Q Sbjct: 374 PPEQLKQAQRFKQLWSRYQQSRDLISVGAYVPGGDADTDLAIARQPQMAQYLRQG 428 >gi|83647778|ref|YP_436213.1| type III secretion system ATPase [Hahella chejuensis KCTC 2396] gi|83635821|gb|ABC31788.1| putative Yops secretion ATP synthase YscN [Hahella chejuensis KCTC 2396] Length = 439 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 152/365 (41%), Positives = 220/365 (60%), Gaps = 5/365 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +V+ + P+G IS V G+ I+ GRV++ +G P+DG + Sbjct: 59 LAEVVGFQEKEALLTPMGDMLGISTATEVITTGQSHHIAVGPHLLGRVLDGMGAPMDGKN 118 Query: 118 SLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + DL + + P M R+ + + G+R +D GQR+GVFA +G GKST Sbjct: 119 ADFPSDLQHYPVYADAPSPMMRRMISEPLSLGVRALDGLLTCGEGQRMGVFAAAGGGKST 178 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LLSM D ++I+L+GERGREVREFIE LG + L +SV+V++TSD + R A Sbjct: 179 LLSMLVMGADVDVIVIALIGERGREVREFIEHNLGPEGLARSVLVISTSDRPSMERAKAA 238 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 A TIAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ LP+LLE Sbjct: 239 YVATTIAEYFRDQGQKVLLLMDSVTRFARAQREIGLAAGEPPTRRGFPPSVFATLPKLLE 298 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R+G +KG+ITA+ +VLV+GD+ ++PIAD VRSILDGHIVL+R LA YP +D LA Sbjct: 299 RVG--FNDKGSITALYTVLVEGDDMSEPIADEVRSILDGHIVLSRKLAATNHYPAIDVLA 356 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S SR+ S + ++ + L+ ++ + + IG Y+ G D + D+A+ ++ I Sbjct: 357 STSRVMTAITSPEHRQAAGKMRELMAKYVDVELLVKIGEYQRGSDPVADEAIAKIDRIRG 416 Query: 416 FLKQS 420 FLKQ+ Sbjct: 417 FLKQA 421 >gi|238787473|ref|ZP_04631271.1| secretion system apparatus ATP synthase ssaN [Yersinia frederiksenii ATCC 33641] gi|238724260|gb|EEQ15902.1| secretion system apparatus ATP synthase ssaN [Yersinia frederiksenii ATCC 33641] Length = 406 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 157/382 (41%), Positives = 220/382 (57%), Gaps = 18/382 (4%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGK 111 ++D L +V+ I + P + G V H R R+ P GRV++ LG Sbjct: 14 SADMLAEVVAIEQQTALLSPFASSAGLRCGQWVSPLGHAHRIRVGPD--LVGRVLDGLGV 71 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 PID L E+ S P + RQ V++ TGIR ID GQRIG+FA +G Sbjct: 72 PIDDGPPLS--GYWRELDSSPPDPLTRQPVQQILTTGIRAIDGLLSCGEGQRIGIFAAAG 129 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPIL 230 +GKS+LLSM D +++L+GERGREVREF+E L + ++VVVVATSD + Sbjct: 130 VGKSSLLSMLCAGCRADITVLALIGERGREVREFLEQVLTPQARARTVVVVATSDRPALE 189 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R TA T+AEYF +G VLL+ DS+TR+A + REI +GE+P +P SVF+ L Sbjct: 190 RLKGIYTATTVAEYFRERGLKVLLMADSLTRYARAAREIGLAAGEIPAMGSFPASVFAAL 249 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 PRLLER G SE G+ITA ++L++GD+ N+P+AD RS+LDGHIVL+R LA G YP Sbjct: 250 PRLLERAGNSES--GSITAFYTILLEGDDMNEPVADEARSLLDGHIVLSRQLAGSGHYPA 307 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410 +D ASVSR+ + S + + L L + ++E + +G Y+ G DL D+A+ + Sbjct: 308 IDIAASVSRIMPQIVSTEHRALAQKLRQMQACYQEIELLVRVGEYQEGQDLHADEALQRY 367 Query: 411 PIIYDFLKQ--------SPSDL 424 P I FL+Q +P+DL Sbjct: 368 PAICAFLQQEYALSSGKTPADL 389 >gi|78067885|ref|YP_370654.1| ATPase FliI/YscN [Burkholderia sp. 383] gi|77968630|gb|ABB10010.1| ATPase FliI/YscN [Burkholderia sp. 383] Length = 519 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 149/323 (46%), Positives = 205/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P + R+ + G+R I+ + G Sbjct: 179 GRVVDASGRPLDGLGPLASKVDAPLSAPSINP--LEREPIHHVLDVGVRAINALLTVGRG 236 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 237 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 296 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 297 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 356 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 357 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 416 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA--DEKKL--VSSLTHLIHRFEETRDIRLIGGYR 396 +LAE G YP +D AS+SR A +A DE L V ++ R++ RD+ +G Y Sbjct: 417 ALAEAGHYPAIDIEASISR----AMTALIDETHLDHVRQFKQMLSRYQRNRDLIAVGAYA 472 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 PG D LD+A+ P I FL+Q Sbjct: 473 PGRDAQLDRAIALYPRIEAFLQQ 495 >gi|126443725|ref|YP_001063282.1| type III secretion system ATPase [Burkholderia pseudomallei 668] gi|126223216|gb|ABN86721.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 668] Length = 442 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 167/432 (38%), Positives = 245/432 (56%), Gaps = 10/432 (2%) Query: 5 LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59 L L+++A+ + L ++ G + V T V + LG+ +G + + Sbjct: 4 LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG Sbjct: 64 AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+ Sbjct: 303 GMG--EQGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 361 SRIMPQIATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420 Query: 418 KQSPSDLSSEDV 429 Q + S D Sbjct: 421 NQRTDEYSPPDA 432 >gi|167043567|gb|ABZ08262.1| putative ATP synthase alpha/beta family, nucleotide-binding domain protein [uncultured marine microorganism HF4000_APKG2K17] Length = 462 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 150/320 (46%), Positives = 208/320 (65%), Gaps = 7/320 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ L +P+DG LG+ S E+ +V MNRQR++K G+R I+ Sbjct: 113 GRVIDPLMRPMDG---LGELSTSTEVPLYPEVVNPMNRQRIKKPLDVGVRSINACLTCGR 169 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQRIG+ AGSG+GKS LL M AR D +ISLVGERG+EVREFIED LG+ +++SVV Sbjct: 170 GQRIGIMAGSGVGKSVLLGMMARYTDADINVISLVGERGKEVREFIEDNLGEEGMRRSVV 229 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 +VATSD+ P+LR A +IAE+F ++G +VLL +DS+TRFA + REI +GE P Sbjct: 230 IVATSDQPPLLRMRGAYIATSIAEHFRNEGQDVLLSMDSLTRFAMAQREIGLAAGEPPTT 289 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF+ LP LLER G + G+IT +VLV+GD+ NDPIAD++R+I+DGHI L+ Sbjct: 290 KGYPPSVFALLPGLLERTG-THDGPGSITGFYTVLVEGDDANDPIADAIRAIVDGHIYLS 348 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R +AE+G YP VD L+S SR+ KL + + + E D+ IG Y G Sbjct: 349 REIAEKGTYPAVDLLSSTSRVMVDVVGEKHLKLNQIMRRTLATYREAEDLINIGAYVQGS 408 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 + +D A+ + P+I +F++Q Sbjct: 409 NPEIDYAITKKPLIQEFIQQ 428 >gi|167835053|ref|ZP_02461936.1| flagellar protein export ATPase FliI [Burkholderia thailandensis MSMB43] Length = 523 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++A G+P+D L K D + S P ++R+ + G+R I+ + G Sbjct: 183 GRIVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 240 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 241 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 300 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A T+AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 301 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 360 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 361 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 420 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR + V ++ R++ RD+ +G Y PG D Sbjct: 421 SLAEAGHYPAIDIEASISRAMTALIDDAHLERVRQFKQMLSRYQRNRDLIAVGAYAPGRD 480 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 481 AQLDRAIALYPRIESFLQQ 499 >gi|238764048|ref|ZP_04625003.1| secretion system apparatus ATP synthase ssaN [Yersinia kristensenii ATCC 33638] gi|238697719|gb|EEP90481.1| secretion system apparatus ATP synthase ssaN [Yersinia kristensenii ATCC 33638] Length = 434 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 161/379 (42%), Positives = 219/379 (57%), Gaps = 8/379 (2%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACW 101 V LG+ Q + + L +V+ I + P + G V G RI Sbjct: 36 VALGELC--QIASPNRLAEVVAIEQQTALLSPFSSSFGLRCGQWVSPLGHAHRIRVGDDL 93 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ LG P+D L E+ P + RQ V++ TGIR ID G Sbjct: 94 AGRVLDGLGVPMDAGPPLT--GYWCELDCPPPDPLTRQPVQQILTTGIRAIDGVLSCGEG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVV 220 QR+G+FA +G+GKS+LLSM D +++L+GERGREVREF+E L + ++VVV Sbjct: 152 QRMGIFAAAGVGKSSLLSMLCAGCAADITVLALIGERGREVREFLEQVLTPQTRARTVVV 211 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 VATSD + R TA T+AEYF +G VLL+ DS+TR A + REI +GE PV Sbjct: 212 VATSDRPALERLKGLYTATTVAEYFRERGLKVLLMADSLTRHARAAREIGLAAGEPPVMG 271 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 +PTSVF+ LPRLLER G SE+ G+ITA +VLV+GD+ N+PIAD VRS+LDGHIVL+R Sbjct: 272 SFPTSVFATLPRLLERAGNSER--GSITAFYTVLVEGDDMNEPIADEVRSLLDGHIVLSR 329 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LA G YP +D ASVSR+ + S + + L L HL ++E + +G Y+ G D Sbjct: 330 QLAGAGHYPAIDIAASVSRIMPQIVSVEHRALAQKLRHLQACYQEIELLVRVGEYQQGQD 389 Query: 401 LILDKAVHQVPIIYDFLKQ 419 L D+A+ + P I FL+Q Sbjct: 390 LQADEALQRYPAICAFLQQ 408 >gi|225181608|ref|ZP_03735049.1| flagellar protein export ATPase FliI [Dethiobacter alkaliphilus AHT 1] gi|225167716|gb|EEG76526.1| flagellar protein export ATPase FliI [Dethiobacter alkaliphilus AHT 1] Length = 439 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 154/371 (41%), Positives = 220/371 (59%), Gaps = 8/371 (2%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G I G V GR F + G V++ LG P+DG G G + + Sbjct: 69 VLMMPLGDLRGIGPGCEVLPTGREFTVKAGPHLLGHVLDGLGVPLDGARINGAGKVC-SV 127 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + RQR+++ TGIR ID+F GQRIG+F+GSG+GKST+L M A+ D Sbjct: 128 DNDPPNPLERQRIKEVLPTGIRAIDMFLTCGQGQRIGIFSGSGVGKSTMLGMIAKHSEAD 187 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+L+GERGREV +FIE LG+ L +SVVV TSD P+LR L A IAEYF Sbjct: 188 INVIALIGERGREVVDFIERDLGEEGLARSVVVAVTSDRPPLLRIKGALVATAIAEYFRD 247 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G V+L++DS+TR A + RE+ GE P +GY SVF+ LPR+LER G S G+I Sbjct: 248 QGKKVMLMMDSVTRLAMAQREVGLAIGEPPTTKGYTPSVFALLPRVLERAGTSRS--GSI 305 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T + +VLVDGD+ N+P+AD+VR ILDGHIVL R LA + +P +D S+SRL + S Sbjct: 306 TGLYTVLVDGDDFNEPVADAVRGILDGHIVLTRDLAAKNHFPAIDVGKSISRLMTELASE 365 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 + +KL + + E D+ IG Y G + +D+A + ++ FL+Q D++ Sbjct: 366 EHRKLAGQFRDYLSAYAEAEDLINIGAYVDGTNPRVDRARQYITAMHTFLRQ---DVNEC 422 Query: 428 DVFQEITKKLQ 438 D +++ KL+ Sbjct: 423 DPYEQALDKLK 433 >gi|330866447|gb|EGH01156.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 452 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 149/359 (41%), Positives = 212/359 (59%), Gaps = 3/359 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +E G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHI+L+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHILLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + L R+++TRD+ +G Y G D D A+ P++ + +Q D S Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 434 >gi|167561143|ref|ZP_02354059.1| flagellar protein export ATPase FliI [Burkholderia oklahomensis EO147] gi|167568362|ref|ZP_02361236.1| flagellar protein export ATPase FliI [Burkholderia oklahomensis C6786] Length = 521 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 198/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+D L K D + S P + R+ + G+R I+ + G Sbjct: 181 GRVVDASGRPLDNLGPLASKVDAPLAAPSINP--LEREPIHHVLDVGVRAINTLLTVGRG 238 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 239 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 298 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 299 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 358 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 359 GYPPSVFAKLPALVERTGNGPQGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 418 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 419 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 478 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 479 AQLDRAIALYPRIESFLQQ 497 >gi|260853456|ref|YP_003227347.1| putative lateral flagellum-specific ATP synthase [Escherichia coli O26:H11 str. 11368] gi|257752105|dbj|BAI23607.1| predicted lateral flagellum-specific ATP synthase [Escherichia coli O26:H11 str. 11368] gi|323158036|gb|EFZ44136.1| flagellum-specific ATP synthase [Escherichia coli EPECa14] Length = 445 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 152/376 (40%), Positives = 222/376 (59%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESCLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S + ++ +L + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMREPASLELVQ 430 >gi|186477681|ref|YP_001859151.1| FliI/YscN family ATPase [Burkholderia phymatum STM815] gi|184194140|gb|ACC72105.1| ATPase, FliI/YscN family [Burkholderia phymatum STM815] Length = 547 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 143/322 (44%), Positives = 201/322 (62%), Gaps = 4/322 (1%) Query: 101 W--CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 W GRV++A GKP+DG L + + + P ++R+ + K G+R I+ + Sbjct: 207 WELLGRVVDASGKPLDGFGPLNSRNDAPLTAPTINP-LHREPIHKVLDVGVRAINSLLTV 265 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 GQR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG+ L +S Sbjct: 266 GRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARS 325 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VVV A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P Sbjct: 326 VVVAAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPP 385 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIV Sbjct: 386 ATKGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIV 445 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R+LAE G YP +D AS+SR S ++ R++ RD+ +G Y Sbjct: 446 LSRALAEAGHYPAIDIEASISRAMTALISDAHLDRTRQFKQMLSRYQRNRDLINVGAYSA 505 Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419 G D +LDKA+ P + FL+Q Sbjct: 506 GRDAVLDKAIALYPRMEAFLQQ 527 >gi|53722650|ref|YP_111635.1| type III secretion system ATPase [Burkholderia pseudomallei K96243] gi|76817792|ref|YP_335845.1| type III secretion system ATPase [Burkholderia pseudomallei 1710b] gi|167820518|ref|ZP_02452198.1| type III secretion system ATPase [Burkholderia pseudomallei 91] gi|167830034|ref|ZP_02461505.1| type III secretion system ATPase [Burkholderia pseudomallei 9] gi|226200025|ref|ZP_03795574.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei Pakistan 9] gi|254186954|ref|ZP_04893470.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei Pasteur 52237] gi|254263795|ref|ZP_04954660.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1710a] gi|52213064|emb|CAH39102.1| putative type III secretion protein [Burkholderia pseudomallei K96243] gi|76582265|gb|ABA51739.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1710b] gi|157934638|gb|EDO90308.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei Pasteur 52237] gi|225927877|gb|EEH23915.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei Pakistan 9] gi|254214797|gb|EET04182.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1710a] Length = 442 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 167/432 (38%), Positives = 244/432 (56%), Gaps = 10/432 (2%) Query: 5 LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59 L L+++A+ + L ++ G + V T V + LG+ +G + + Sbjct: 4 LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG Sbjct: 64 AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 124 LDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+ Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420 Query: 418 KQSPSDLSSEDV 429 Q + S D Sbjct: 421 NQRTDEYSPPDA 432 >gi|114566387|ref|YP_753541.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337322|gb|ABI68170.1| type III secretion system ATPase, FliI/YscN [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 442 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 156/394 (39%), Positives = 230/394 (58%), Gaps = 8/394 (2%) Query: 31 SVYYTVTCLSQYVCLGDFVVHQGKNSDNL---GQVIRINLDIVYICPVGIGEEISLGDLV 87 ++ T+ V +G+ Q SD +V+ + + P+G E I G + Sbjct: 31 AIGLTIEATGPRVRMGELCFLQTNYSDRQLVPAEVVGFKDKKILLMPLGNLEGIGPGSEL 90 Query: 88 FHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146 G R+ GRV+N LG+PID D K + + + ++ P + R+R+ + + Sbjct: 91 LASGTTLRVQVGMELVGRVLNGLGEPID-DRGRIKSETTYPVTNQPPSPLKRKRITEVLQ 149 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206 G++ ID + GQR+G+ AGSG+GKSTL+ M AR+ D +I+L+GERGREVREF+ Sbjct: 150 VGVKAIDGLVSIGKGQRMGILAGSGVGKSTLIGMIARNTEADINVIALIGERGREVREFL 209 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 E LG+ L KSVVVVATSD+ ++R A +IAEYF +G +VL ++DS+TRFA + Sbjct: 210 ERDLGEEGLGKSVVVVATSDQPALVRLKGAFVATSIAEYFRDQGKDVLFLMDSVTRFALA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 RE+ GE P RGY SVF+ LP+LLER G S EKG IT + SVLV+GD+ N+PI Sbjct: 270 QREVGLAIGEPPATRGYTPSVFAMLPKLLERAGTS--EKGTITGLYSVLVEGDDLNEPIT 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 D+VR ILDGHI L+RSLA YP +D S+SR+ S K + ++ +EE Sbjct: 328 DAVRGILDGHIALSRSLAAMNLYPAIDVGQSISRVMIDIASPKHIKNANRFRSILATYEE 387 Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 RD+ IG Y+ G + +D+++ + +F++Q Sbjct: 388 ARDLIDIGAYKKGSNPRIDESIALIDKCQNFIRQ 421 >gi|171316792|ref|ZP_02906003.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5] gi|171098050|gb|EDT42866.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5] Length = 386 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 148/361 (40%), Positives = 217/361 (60%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +VI + + P + +S V GR + GRV+++LG PIDG + Sbjct: 6 EVIGFTRHVALLSPFARVDRVSRTTRVVALGRPLSVPVGRMLLGRVVDSLGWPIDGGAPV 65 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 GDL + ++ P M R + TG+R +D L GQR+G+FA +G+GKSTLL Sbjct: 66 QAGDLR-SVFAEPPAPMRRCPIAVPLATGVRAVDAMLTLAEGQRMGIFAPAGVGKSTLLG 124 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M AR D +I+L+GERGREVREF+E LG + + +SVVV ATSD S I R A A Sbjct: 125 MLARGAHCDVNVIALIGERGREVREFVETILGREGMARSVVVCATSDRSAIERAKAAYVA 184 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAE F +G VLL++DS+TRFA ++RE+ +GE PV RG+P SVF+ELPRLLER G Sbjct: 185 TAIAESFRDEGQRVLLMMDSLTRFARALREVGLAAGESPVRRGFPPSVFAELPRLLERAG 244 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+G+ITA+ +VL + D DP+++ VR I+DGH+VL+R++A + +YP +D L S+S Sbjct: 245 MG--ERGSITALYTVLEEDDAGGDPVSEEVRGIVDGHMVLSRAIAAKNQYPAIDVLGSLS 302 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + D + + L+ ++ E + IG Y+ G + I D+A+ ++ +I FL Sbjct: 303 RVMSQVVPPDHVEAAGRVRRLLAQYGEIEALLQIGEYQGGTNAIADEAIAKIDVIRAFLS 362 Query: 419 Q 419 Q Sbjct: 363 Q 363 >gi|254301364|ref|ZP_04968808.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 406e] gi|157811412|gb|EDO88582.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 406e] Length = 442 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 167/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%) Query: 5 LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59 L L+++A+ + L ++ G + V T V + LG+ +G + + Sbjct: 4 LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG Sbjct: 64 AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 124 LDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERTKAAYA 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+ Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420 Query: 418 KQSPSDLSSED 428 Q + S D Sbjct: 421 NQRTDEYSPPD 431 >gi|167915639|ref|ZP_02502730.1| type III secretion system ATPase [Burkholderia pseudomallei 112] Length = 442 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 168/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%) Query: 5 LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59 L L+++A+ + L ++ G + V T V + LG+ +G + + Sbjct: 4 LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG Sbjct: 64 AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+ITA+ +VL + D+ +DPIA+ VR ILDGHIVL+R +A +YP +D L S+ Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIVLSREIAARNQYPAIDVLGSL 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420 Query: 418 KQSPSDLSSED 428 Q + S D Sbjct: 421 NQRTDEYSPPD 431 >gi|157959910|ref|YP_001499944.1| FliI/YscN family ATPase [Shewanella pealeana ATCC 700345] gi|157844910|gb|ABV85409.1| ATPase, FliI/YscN family [Shewanella pealeana ATCC 700345] Length = 445 Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 149/349 (42%), Positives = 212/349 (60%), Gaps = 4/349 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 GR I GRV++ LG+P+DG + K + + K + R+ +E+ GIR Sbjct: 91 GRCLIPSGLGILGRVLDGLGQPLDGLGCI-KHLPHVPLQHKPTNPLMRKAIEEPLDVGIR 149 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 I+ P+ GQR+G+FAGSG+GKS LL M R D V++ L+GERGREV+EFI++ L Sbjct: 150 AINALLPIGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVKEFIDESL 209 Query: 211 GD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ K++VV+ A +D +P++R A IA + +G VLL++DS+TR+A + REI Sbjct: 210 GEEGRKRAVVIAAPADTTPLMRMRAMRLCHHIAATYRDQGKQVLLLVDSLTRYAQAQREI 269 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 A + GE P +GYP S F++LP L+E G + G +TA +VL +GD+ DPIADS R Sbjct: 270 ALSLGEPPATKGYPPSAFAQLPSLVEMAGNGQHPTGTLTAFYTVLTEGDDQQDPIADSAR 329 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 +ILDGHIVL+R LAE+G +P +D ASVSRLA K S + K HL R+ E +D+ Sbjct: 330 AILDGHIVLSRKLAEKGHFPAIDIGASVSRLATKVASEETLKQGQWFRHLNSRYNEVKDL 389 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +GGY+ G D +D AV P + +FL+QS + S D IT Q Sbjct: 390 LPLGGYQAGHDPEMDMAVSAYPKMAEFLRQSTN--SQADHAHSITALAQ 436 >gi|328468945|gb|EGF39905.1| type III secretion system ATPase [Vibrio parahaemolyticus 10329] Length = 440 Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 151/357 (42%), Positives = 213/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G++++ LG+P DG S + + Sbjct: 88 VSPMGKMHEVGVGDHLL--------------GKILDGLGRPFDGAQSQ-EPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG D + +SV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEDGMARSVLVVATSDRPAMERSKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ + + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPNHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + L ++ ++EE + IG Y+ G D D A+ Q I FL+Q PSDL Sbjct: 371 ASAAHLREMLAKYEEVELLIKIGEYQHGADPRADLAIAQSDDIRTFLRQGTHEPSDL 427 >gi|330444058|ref|YP_004377044.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila pecorum E58] gi|328807168|gb|AEB41341.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila pecorum E58] Length = 442 Score = 269 bits (688), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 156/383 (40%), Positives = 233/383 (60%), Gaps = 10/383 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD--D 117 +V+ + ++ P+G +S V G I GRV+N LG+PID + Sbjct: 61 EVVGFTQNFAFLSPLGELTGVSPASEVVPTGLPLHIRAGDGLLGRVLNGLGEPIDTEFKG 120 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L D + I P ++R+++ TG+R ID + GQRIG+FAG+G+GKS+L Sbjct: 121 PLVNVDETYPIFCPPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGKSSL 180 Query: 178 LSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 L M AR ++ D +I+L+GERGREVREFIE LG+ +K+SV+VV+TSD+S LR A Sbjct: 181 LGMIARNAEEADINVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRLNAA 240 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 IAEYF ++G V+L++DS+TRFA ++RE+ +GE P GY SVFS LPRLLE Sbjct: 241 YVGTAIAEYFRNQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPRLLE 300 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S +KG ITA +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+ YP +D LA Sbjct: 301 RSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAIDVLA 358 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SRL ++++++ ++ +++ + IG YR G D +D A+ + + Sbjct: 359 SISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDKLNR 418 Query: 416 FLKQSPSDLSSEDVFQEITKKLQ 438 FLKQ D+ + ++E ++L+ Sbjct: 419 FLKQ---DIHEKTNYEEAAQQLR 438 >gi|297584038|ref|YP_003699818.1| flagellar protein export ATPase FliI [Bacillus selenitireducens MLS10] gi|297142495|gb|ADH99252.1| flagellar protein export ATPase FliI [Bacillus selenitireducens MLS10] Length = 434 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 153/382 (40%), Positives = 235/382 (61%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKP-IDGD 116 L +V+ + V + P +I+ G LV GR + G V++ LG+ +DG Sbjct: 55 LAEVVGFREEKVLLMPFDRISDIAAGSLVETMGRPLEVKVGRDMIGTVVDGLGRHFLDGG 114 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + +G S + ++ P M R R+ + G++ ID + GQR+G+FAGSG+GKST Sbjct: 115 ERIGNQYYSTD--NEPPNPMTRPRISEPLGLGVKAIDGLFTVGKGQRMGIFAGSGVGKST 172 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 L++M +S D +I+L+GERGREVR+FIE LG+ +K ++VVVATSD+ P++R Sbjct: 173 LMAMITKSSEADINVIALIGERGREVRDFIERDLGEEGMKNTIVVVATSDQPPLMRIKGA 232 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +TA I+EYF G +V L++DS+TR A + REI GE P +GY SVF+ LPRLLE Sbjct: 233 MTATAISEYFRDLGYDVNLMMDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFALLPRLLE 292 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S+ G+ITA +VLVDGD+ N+P+ADSVR ILDGH+VL+R LA +G +P ++PL+ Sbjct: 293 RSGMSQS--GSITAFYTVLVDGDDMNEPVADSVRGILDGHLVLDRKLANKGHFPAINPLS 350 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR+ ++ ++ + +I ++E+ D+ IG Y+ G + +D+A+ + P + + Sbjct: 351 SISRIMNELVDDRHRQAADKVRQIISTYQESEDLINIGAYKKGSNPEVDEAIKRFPEVNE 410 Query: 416 FLKQSPSDLSSEDVFQEITKKL 437 FL Q + S D EI +L Sbjct: 411 FLVQEVHEAFSYD---EIMNQL 429 >gi|153001449|ref|YP_001367130.1| flagellum-specific ATP synthase [Shewanella baltica OS185] gi|151366067|gb|ABS09067.1| flagellar protein export ATPase FliI [Shewanella baltica OS185] Length = 445 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 148/367 (40%), Positives = 224/367 (61%), Gaps = 3/367 (0%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117 + +V+ + +++Y+ P+ + G V G + ++ GRV++ G P+DG Sbjct: 61 IAEVVGFDGELLYLMPIEELRGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDGLG 120 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 +L + + + P ++R+ + + G+R I+ + GQR+G+FAGSG+GKS L Sbjct: 121 ALQTDQQAPRHSAAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M R D +++ LVGERGREV+EFIE+ LGD + +SVVV A +D SP++R A Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRACE 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LPRL+ER Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLA+ G YP +D AS Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+A S + + + + +++ RD+ IG Y G D +D A+ P + F Sbjct: 360 ISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAF 419 Query: 417 LKQSPSD 423 L+Q+ D Sbjct: 420 LRQTMRD 426 >gi|126175125|ref|YP_001051274.1| flagellum-specific ATP synthase [Shewanella baltica OS155] gi|160876174|ref|YP_001555490.1| flagellum-specific ATP synthase [Shewanella baltica OS195] gi|217972619|ref|YP_002357370.1| flagellum-specific ATP synthase [Shewanella baltica OS223] gi|304409957|ref|ZP_07391576.1| flagellar protein export ATPase FliI [Shewanella baltica OS183] gi|307302330|ref|ZP_07582088.1| flagellar protein export ATPase FliI [Shewanella baltica BA175] gi|125998330|gb|ABN62405.1| flagellar protein export ATPase FliI [Shewanella baltica OS155] gi|160861696|gb|ABX50230.1| flagellar protein export ATPase FliI [Shewanella baltica OS195] gi|217497754|gb|ACK45947.1| ATPase FliI/YscN [Shewanella baltica OS223] gi|304351366|gb|EFM15765.1| flagellar protein export ATPase FliI [Shewanella baltica OS183] gi|306914368|gb|EFN44789.1| flagellar protein export ATPase FliI [Shewanella baltica BA175] gi|315268370|gb|ADT95223.1| flagellar protein export ATPase FliI [Shewanella baltica OS678] Length = 445 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 148/367 (40%), Positives = 224/367 (61%), Gaps = 3/367 (0%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117 + +V+ + +++Y+ P+ + G V G + ++ GRV++ G P+DG Sbjct: 61 IAEVVGFDGELLYLMPIEELRGVLPGARVVPLGEQTGLNVGLSLLGRVLDGNGVPLDGLG 120 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 +L + + + P ++R+ + + G+R I+ + GQR+G+FAGSG+GKS L Sbjct: 121 ALQTDQQAPRHSAAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M R D +++ LVGERGREV+EFIE+ LGD + +SVVV A +D SP++R A Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGDKGRARSVVVAAPADTSPLMRLRACE 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LPRL+ER Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLA+ G YP +D AS Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+A S + + + + +++ RD+ IG Y G D +D A+ P + F Sbjct: 360 ISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMNAF 419 Query: 417 LKQSPSD 423 L+Q+ D Sbjct: 420 LRQTMRD 426 >gi|89094452|ref|ZP_01167392.1| flagellum-specific ATP synthase [Oceanospirillum sp. MED92] gi|89081344|gb|EAR60576.1| flagellum-specific ATP synthase [Oceanospirillum sp. MED92] Length = 463 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 147/364 (40%), Positives = 218/364 (59%), Gaps = 9/364 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119 +V+ + D +Y+ P+ E + G V + P GRV+N +GKPIDG L Sbjct: 61 EVVGFSGDRIYLMPLYPIEGLQAGTPVIARADTGMVPVGMNLLGRVLNGVGKPIDGKGPL 120 Query: 120 ---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + L+ EI++ + R + + GIR I+ + GQR+G+FAGSG+GKS Sbjct: 121 RPEAETGLAGEIINP----LLRAPINQTLDVGIRTINSLLTVGRGQRMGLFAGSGVGKSV 176 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 LL M R + +++ L+GERGREV+EFIE LG+ LK+SVVV + +D+SP++R A Sbjct: 177 LLGMMTRFTEAEIIVVGLIGERGREVKEFIEHSLGEEGLKRSVVVASPADDSPLMRLRAS 236 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 + IAEYF +G NVLL++DS+TR+A + REIA GE P +GYP SVF+++P+L+E Sbjct: 237 QLSTRIAEYFRDQGKNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKIPKLVE 296 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G +++ G ITA +VL +GD+ DP+ADS R+ILDGH+VL R LAE+G YP +D A Sbjct: 297 RAGNAQEGGGAITAFYTVLTEGDDQQDPVADSARAILDGHVVLARRLAEQGHYPAIDVEA 356 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR + D K+ L ++ + D+ +G Y G D D + +P + Sbjct: 357 SISRAMPQIIEPDHLKMAMRFKQLYSKYRQNEDLINVGAYVKGSDPDTDFVIENLPSMNA 416 Query: 416 FLKQ 419 FL+Q Sbjct: 417 FLRQ 420 >gi|262284529|gb|ACY41066.1| VscN [Vibrio alginolyticus] Length = 440 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G ++ LG+P DG S + + Sbjct: 88 VSPMGKMHEVGVGDHLL--------------GTTLDGLGRPFDGTQSQ-EPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAEVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG+ + KSV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ +D + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVESDHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + + ++ ++EE + IG Y+ G D D A+ Q I FL+Q PSDL Sbjct: 371 ASAAHIREMLAKYEEVELLIKIGEYQHGADSRADMAIAQSDDIRAFLRQGTHEPSDL 427 >gi|187775646|ref|ZP_02797343.2| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4196] gi|188024746|ref|ZP_02773677.2| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4113] gi|189404737|ref|ZP_02810590.2| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC869] gi|189405700|ref|ZP_02823671.2| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC508] gi|193070354|ref|ZP_03051296.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli E110019] gi|187771370|gb|EDU35214.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4196] gi|188016937|gb|EDU55059.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4113] gi|189374706|gb|EDU93122.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC869] gi|189378721|gb|EDU97137.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC508] gi|192956293|gb|EDV86754.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli E110019] Length = 438 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 151/372 (40%), Positives = 219/372 (58%), Gaps = 3/372 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P++ Sbjct: 56 SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 115 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 116 SNIAAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 175 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 176 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 235 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 236 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 295 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 296 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 353 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ +++ + + LI ++ + IG Y G D DKA+ +I Sbjct: 354 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 413 Query: 415 DFLKQSPSDLSS 426 +F++QS D+SS Sbjct: 414 NFIQQSTKDISS 425 >gi|330414746|gb|AEC13712.1| non-flagellar type III secretion system ATPase [Acidovorax citrulli] Length = 442 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 207/323 (64%), Gaps = 4/323 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI++LG+PIDG L + + + + P M R+ +E TG++ ID L GQ Sbjct: 108 GRVIDSLGQPIDGKGPLDCSE-TRPVFALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQ 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FA +G+GKSTL+ M AR D +I+L+GERGREVREF+E LG+ + +SVVV Sbjct: 167 RMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERGREVREFVEFILGEEGMARSVVVC 226 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD S R A A +AEY+ +G VLL++DS+TRFA + REI +GE P RG Sbjct: 227 ATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDSLTRFARAQREIGLAAGEPPARRG 286 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF+E+PRLLER G + G+ITA+ +VL + ++ NDPI++ VR ILDGH++L+R Sbjct: 287 FPPSVFAEIPRLLERAGMGAR--GSITALYTVLYEDESGNDPISEEVRGILDGHMILSRK 344 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A +YP +D L S+SR+ + + ++ L+ ++EE + +G YRPG D Sbjct: 345 IAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLMAKYEEIEPLVQMGEYRPGNDP 404 Query: 402 ILDKAVHQVPIIYDFLKQSPSDL 424 + D+A+ + I DFL QS SDL Sbjct: 405 LADEAMEKHAAIRDFLNQSTSDL 427 >gi|187918162|ref|YP_001883725.1| flagellum-specific ATP synthase [Borrelia hermsii DAH] gi|119861010|gb|AAX16805.1| flagellum-specific ATP synthase [Borrelia hermsii DAH] Length = 436 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 148/341 (43%), Positives = 221/341 (64%), Gaps = 5/341 (1%) Query: 81 ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 I +GD V+ + +I+ S GRVI++LG+PID S + P + R Sbjct: 79 IEVGDKVYSLNKKPQINLSDELLGRVIDSLGRPIDNKGQFLGNHYKELSFSSINP-LKRG 137 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 K TG+RV+D F P+ GQR+G+F+G+G+GKSTLL M A++ D +I+ +GERG Sbjct: 138 IFSKQIVTGVRVLDGFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSKADVNVIAFIGERG 197 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 RE+ EFIE LG+ KKSV++V+TSDESPI R TA IAE+F +G +V+L+ DS Sbjct: 198 RELNEFIEYDLGEECFKKSVLIVSTSDESPISRYKGAYTATLIAEHFRDRGMDVMLLFDS 257 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 ITRFA++ REI+ + GELP +GYP SVF E+P LLER+G + KG+IT +VLV+ D Sbjct: 258 ITRFANAKREISLSMGELPATKGYPPSVFVEIPILLERLGLN--GKGSITGFYTVLVESD 315 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + +PIAD+++++LDGHI+L+R L++ G YP V+ L+S SR + + +++KL+S + + Sbjct: 316 DFTEPIADNMKAVLDGHIILDRDLSDRGIYPSVNILSSTSRSLHRIVNFEKQKLISKIRN 375 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L+ ++ D+ G Y G + +D A+ + P I DFL Q Sbjct: 376 LLSIYKNYEDLIKTGIYMKGSNKEVDLAIAKYPKIIDFLSQ 416 >gi|254251154|ref|ZP_04944472.1| Flagellar biosynthesis/type III secretory pathway ATPase [Burkholderia dolosa AUO158] gi|124893763|gb|EAY67643.1| Flagellar biosynthesis/type III secretory pathway ATPase [Burkholderia dolosa AUO158] Length = 515 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+DG L K D + S P ++R+ + G+R I+ + G Sbjct: 175 GRVVDASGRPLDGLGPLASKVDAPLSSPSINP--LDREPIHHVLDVGVRAINALLTVGRG 232 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 233 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 292 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 293 AAPADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 352 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 353 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 412 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 413 ALAEAGHYPAIDIEASISRAMTALIDDAHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGRD 472 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 473 AQLDRAIALYPRIEAFLQQ 491 >gi|167717597|ref|ZP_02400833.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei DM98] Length = 454 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+D L K D + S P ++R+ + G+R I+ + G Sbjct: 114 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 171 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 172 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 231 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A T+AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 232 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 291 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 292 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 351 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 352 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 411 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 412 AQLDRAIALYPRIESFLQQ 430 >gi|167743337|ref|ZP_02416111.1| type III secretion system ATPase [Burkholderia pseudomallei 14] Length = 434 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 167/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%) Query: 5 LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59 L L+++A+ + L ++ G + V T V + LG+ +G + + Sbjct: 4 LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG Sbjct: 64 AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+ Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420 Query: 418 KQSPSDLSSED 428 Q + S D Sbjct: 421 NQRTDEYSPPD 431 >gi|145298349|ref|YP_001141190.1| flagellum-specific ATP synthase [Aeromonas salmonicida subsp. salmonicida A449] gi|142851121|gb|ABO89442.1| Polar flagellum-specific ATP synthase [Aeromonas salmonicida subsp. salmonicida A449] Length = 443 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 201/320 (62%), Gaps = 2/320 (0%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ +G+P+DG + ++ P ++R+ + + G+R I+ + Sbjct: 101 LLGRVIDGIGQPLDGLGPILSSQTVQFAQHRINP-LSRRPIHQPMDVGVRAINAVLTVGQ 159 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219 GQR+G+FAGSG+GKS LL M R D V++ L+GERGREV+EFIED LG+ + +SVV Sbjct: 160 GQRMGLFAGSGVGKSVLLGMMTRGSVADVVVVGLIGERGREVKEFIEDILGEEGRARSVV 219 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R TA+ IAEYF +G NVLL++DS+TR+A + REIA GE P Sbjct: 220 VAAPADASPLMRLKGCETALAIAEYFRDQGLNVLLLMDSLTRYAQAQREIALAVGEPPAT 279 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+ Sbjct: 280 KGYPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 339 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA+ G YP +D S+SR+ S + L +L +++ RD+ IG Y G Sbjct: 340 RELADAGHYPAIDIEKSISRVMPMVTSPEHMDLARTLKQFYSLYQQNRDLITIGAYSQGS 399 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D +D+A+ P + FL+Q Sbjct: 400 DPRIDRAIVHKPYLDQFLQQ 419 >gi|221361483|emb|CAX18653.1| Type III secretion system, ATPase, LEE associated [Escherichia coli] gi|221361543|emb|CAX18733.1| Type III secretion system, ATPase, LEE associated [Escherichia coli] Length = 446 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 151/372 (40%), Positives = 219/372 (58%), Gaps = 3/372 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P++ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 TNIAAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ +++ + + LI ++ + IG Y G D DKA+ +I Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421 Query: 415 DFLKQSPSDLSS 426 +F++QS D+SS Sbjct: 422 NFIQQSTKDISS 433 >gi|15804229|ref|NP_290268.1| hypothetical protein Z5119 [Escherichia coli O157:H7 EDL933] gi|15833822|ref|NP_312595.1| EscN [Escherichia coli O157:H7 str. Sakai] gi|168753518|ref|ZP_02778525.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4401] gi|168759815|ref|ZP_02784822.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4501] gi|168766115|ref|ZP_02791122.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4486] gi|168779850|ref|ZP_02804857.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4076] gi|195936251|ref|ZP_03081633.1| EscN [Escherichia coli O157:H7 str. EC4024] gi|208807966|ref|ZP_03250303.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4206] gi|208813614|ref|ZP_03254943.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4045] gi|208819394|ref|ZP_03259714.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4042] gi|209396453|ref|YP_002273166.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4115] gi|217326243|ref|ZP_03442327.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. TW14588] gi|254795643|ref|YP_003080480.1| LEE-encoded type III secretion system factor [Escherichia coli O157:H7 str. TW14359] gi|261225787|ref|ZP_05940068.1| LEE-encoded type III secretion system factor [Escherichia coli O157:H7 str. FRIK2000] gi|261258832|ref|ZP_05951365.1| LEE-encoded type III secretion system factor [Escherichia coli O157:H7 str. FRIK966] gi|291285056|ref|YP_003501874.1| escN [Escherichia coli O55:H7 str. CB9615] gi|12518459|gb|AAG58832.1|AE005596_2 escN [Escherichia coli O157:H7 str. EDL933] gi|3414902|gb|AAC31513.1| L0034 [Escherichia coli] gi|13364043|dbj|BAB37991.1| type III secretion system protein EscN [Escherichia coli O157:H7 str. Sakai] gi|54311615|emb|CAG17530.1| EscN protein [Escherichia coli] gi|189002580|gb|EDU71566.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4076] gi|189359190|gb|EDU77609.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4401] gi|189364526|gb|EDU82945.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4486] gi|189369772|gb|EDU88188.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4501] gi|195957519|gb|ACG59630.1| type III secretion system protein EscN [Escherichia coli O157:H7] gi|195957578|gb|ACG59688.1| type III secretion system protein EscN [Escherichia coli] gi|195957635|gb|ACG59744.1| EscN [Escherichia coli] gi|208727767|gb|EDZ77368.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4206] gi|208734891|gb|EDZ83578.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4045] gi|208739517|gb|EDZ87199.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4042] gi|209157853|gb|ACI35286.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. EC4115] gi|217322464|gb|EEC30888.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli O157:H7 str. TW14588] gi|254595043|gb|ACT74404.1| LEE-encoded type III secretion system factor [Escherichia coli O157:H7 str. TW14359] gi|255348316|gb|ACU09458.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli] gi|290764929|gb|ADD58890.1| escN [Escherichia coli O55:H7 str. CB9615] gi|320191258|gb|EFW65908.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli O157:H7 str. EC1212] gi|320639359|gb|EFX08974.1| escN hypothetical protein [Escherichia coli O157:H7 str. G5101] gi|320644803|gb|EFX13839.1| escN [Escherichia coli O157:H- str. 493-89] gi|320650067|gb|EFX18563.1| escN [Escherichia coli O157:H- str. H 2687] gi|320655414|gb|EFX23349.1| escN [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661041|gb|EFX28477.1| escN [Escherichia coli O55:H7 str. USDA 5905] gi|320666166|gb|EFX33172.1| escN [Escherichia coli O157:H7 str. LSU-61] gi|326337309|gb|EGD61144.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli O157:H7 str. 1044] gi|326341682|gb|EGD65471.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli O157:H7 str. 1125] Length = 446 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 151/372 (40%), Positives = 219/372 (58%), Gaps = 3/372 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P++ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 SNIAAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ +++ + + LI ++ + IG Y G D DKA+ +I Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421 Query: 415 DFLKQSPSDLSS 426 +F++QS D+SS Sbjct: 422 NFIQQSTKDISS 433 >gi|254185075|ref|ZP_04891664.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1655] gi|254194394|ref|ZP_04900826.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei S13] gi|169651145|gb|EDS83838.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei S13] gi|184215667|gb|EDU12648.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1655] Length = 442 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 167/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%) Query: 5 LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59 L L+++A+ + L ++ G + V T V + LG+ +G + + Sbjct: 4 LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG Sbjct: 64 AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 124 LDY-DALRPVLAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+ Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420 Query: 418 KQSPSDLSSED 428 Q + S D Sbjct: 421 NQRTDEYSPPD 431 >gi|295678028|ref|YP_003606552.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1002] gi|295437871|gb|ADG17041.1| flagellar protein export ATPase FliI [Burkholderia sp. CCGE1002] Length = 546 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 142/321 (44%), Positives = 202/321 (62%), Gaps = 8/321 (2%) Query: 103 GRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++A G+P+DG LG LS +++ +NR+ + K G+R I+ + Sbjct: 205 GRVLDASGRPLDGLGPLGTQTDAPLSAPVINP----LNREPIHKVLDVGVRAINSLLTVG 260 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218 GQR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG+ L +SV Sbjct: 261 RGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGLARSV 320 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A + ++AEYF +G +VLL++DS+TR+A + REIA GE P Sbjct: 321 VIAAPADVSPLLRMQAAAYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPA 380 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 381 TKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 440 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +RSLAE G YP +D AS+SR + ++ R++ RD+ +G Y G Sbjct: 441 SRSLAEAGHYPAIDIEASISRAMTALIDDNHLNKTRMFKQMLSRYQRNRDLINVGAYSAG 500 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LD+A+ P + FL+Q Sbjct: 501 RDALLDRAIALYPRMEAFLQQ 521 >gi|212637772|ref|YP_002314297.1| ATPase FliI/YscN [Shewanella piezotolerans WP3] gi|212559256|gb|ACJ31710.1| ATPase FliI/YscN [Shewanella piezotolerans WP3] Length = 447 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 143/330 (43%), Positives = 206/330 (62%), Gaps = 2/330 (0%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 GR++I GRV+N LG+P+D D K + + K + R+ +++ GIR Sbjct: 87 GRYQIPSGQGLLGRVLNGLGQPLD-DLGCIKHMPHVPLQFKTTNPLLRKPIKEPLDVGIR 145 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 I+ P+ GQR+G+FAGSG+GKS LL M R D V++ L+GERGREVREFI++ L Sbjct: 146 AINALLPVGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVREFIDESL 205 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ K++VVV A +D +P++R A IA + +G VLL++DS+TR+A + REI Sbjct: 206 GEEGRKRAVVVAAPADTTPLMRMRAMRLCHQIAAAYRDQGKQVLLLVDSLTRYAQAQREI 265 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 A + GE P +GYP S F++LP L+E G S+ G +TA +VL +GD+ DPIADS R Sbjct: 266 ALSLGEPPATKGYPPSAFAQLPSLVEMAGNSQHPTGTLTAFYTVLTEGDDQQDPIADSAR 325 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 +ILDGHIVL+R LAE+G +P +D ASVSRLA + + + + H+ R+ E RD+ Sbjct: 326 AILDGHIVLSRKLAEQGHFPAIDIAASVSRLATQVANEETLRQGQWFRHINSRYNEIRDL 385 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +GGY+ G D +D +V P + FLKQ Sbjct: 386 LPLGGYQAGHDPEMDLSVSAYPHMATFLKQ 415 >gi|120609166|ref|YP_968844.1| type III secretion system ATPase [Acidovorax citrulli AAC00-1] gi|58700621|gb|AAW81012.1| HrcN [Acidovorax citrulli] gi|120587630|gb|ABM31070.1| type III secretion apparatus H+-transporting two-sector ATPase [Acidovorax citrulli AAC00-1] Length = 442 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 207/323 (64%), Gaps = 4/323 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI++LG+PIDG L + + + + P M R+ +E TG++ ID L GQ Sbjct: 108 GRVIDSLGQPIDGKGPLDCSE-TRPVFALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQ 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FA +G+GKSTL+ M AR D +I+L+GERGREVREF+E LG+ + +SVVV Sbjct: 167 RMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERGREVREFVEFILGEEGMARSVVVC 226 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD S R A A +AEY+ +G VLL++DS+TRFA + REI +GE P RG Sbjct: 227 ATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDSLTRFARAQREIGLAAGEPPARRG 286 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF+E+PRLLER G + G+ITA+ +VL + ++ NDPI++ VR ILDGH++L+R Sbjct: 287 FPPSVFAEIPRLLERAGMGAR--GSITALYTVLYEDESGNDPISEEVRGILDGHMILSRK 344 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A +YP +D L S+SR+ + + ++ L+ ++EE + +G YRPG D Sbjct: 345 IAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLMAKYEEIEPLVQMGEYRPGNDP 404 Query: 402 ILDKAVHQVPIIYDFLKQSPSDL 424 + D+A+ + I DFL QS SDL Sbjct: 405 LADEAMEKHAAIRDFLNQSTSDL 427 >gi|167813739|ref|ZP_02445419.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 91] Length = 464 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+D L K D + S P ++R+ + G+R I+ + G Sbjct: 124 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 181 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 182 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 241 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A T+AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 242 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 301 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 302 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 361 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 362 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 421 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 422 AQLDRAIALYPRIESFLQQ 440 >gi|1196321|gb|AAB51413.1| flagellar export apparatus [Borrelia burgdorferi] Length = 436 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 146/341 (42%), Positives = 218/341 (63%), Gaps = 4/341 (1%) Query: 81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 I +G+ V+ + I+ S GRVI++LG+PID S I K+ P +NR Sbjct: 78 IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFLNNSYKELIFEKINP-INRS 136 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 E TG++V+D F P+ GQR+G+F+GSG+GKSTLL M A++ D +I+ +GERG Sbjct: 137 IFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADVNVIAFIGERG 196 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 RE+ EFIE LG+ LKKSV+VV+TSDESPI R A IAEYF +G +V DS Sbjct: 197 RELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVAFCFDS 256 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 ITRFA++ RE++ + GE PVA+GYP SVF E+P LLER G + G++T +VLV+GD Sbjct: 257 ITRFANAKREMSLSLGEPPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEGD 315 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + +P+AD+++++LDGHI+L+R L + G YP ++ L+S SR + S +++KL+ + Sbjct: 316 DFTEPVADNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKARN 375 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L+ +++ D+ G Y G + +D A+ + P I +F+ Q Sbjct: 376 LLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQ 416 >gi|238796934|ref|ZP_04640438.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969] gi|238719194|gb|EEQ11006.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969] Length = 456 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 155/387 (40%), Positives = 228/387 (58%), Gaps = 16/387 (4%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF---------HWGRFRISPSACWCGRVINALGK 111 +V+ N +I+Y+ P+ + I G V+ H + + P GRV++A + Sbjct: 66 EVVGFNGEILYLMPLENVDGILPGARVYAQGSGADIAHGKQLPLGPE--LLGRVLDASAR 123 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 P+DG G + V P + R ++ G+R I+ + GQR+G+FAGSG Sbjct: 124 PLDGLPPPGCAKQAPLFTQPVNPLL-RDPIKDVLDVGVRAINGLLTVGRGQRMGLFAGSG 182 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPIL 230 +GKS LL M AR D +++ L+GERGREV++FIE+ LG+ L +SVV+ A +D SPIL Sbjct: 183 VGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGEEGLSRSVVIAAPADVSPIL 242 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R + A IAE F +G +VLLI+DS+TR+A + REIA GE P +GYP SVF++L Sbjct: 243 RMQGAVYATRIAEDFRERGMDVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL 302 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 P L+ER G KE G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R LAE G YP Sbjct: 303 PALVERAGNGVKEGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAESGHYPA 362 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410 +D AS+SR + + V + L+ ++ RD+ +G Y G D +LDKA+ Sbjct: 363 IDIEASISRAMTELIDQAHYRKVQNFKQLLSSYQRNRDLVSVGAYAAGSDPLLDKAIRLY 422 Query: 411 PIIYDFLKQSPSDLSSEDVFQEITKKL 437 P + +L+Q+ + S ++E + +L Sbjct: 423 PEMETYLQQAIHESSG---YEEASDRL 446 >gi|104782818|ref|YP_609316.1| flagellum-specific ATP synthase [Pseudomonas entomophila L48] gi|95111805|emb|CAK16529.1| flagellum-specific ATP synthase [Pseudomonas entomophila L48] Length = 451 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 153/367 (41%), Positives = 220/367 (59%), Gaps = 13/367 (3%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDD 117 +V+ + D V++ PVG ++ G V GR + S GRV++ G+ +DG Sbjct: 68 EVMGFSGDKVFLMPVGSIAGLAPGARVVPLDDSGRLPMGMS--MLGRVLDGAGRALDGKG 125 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + K + + + V +NR + + GIR I+ + GQR+G+FAG+G+GKS L Sbjct: 126 GM-KAEDWVPMDGPVINPLNRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVL 184 Query: 178 LSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKM 233 L M CF + +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R Sbjct: 185 LGMMT---CFTEAEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLR 241 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A + IAEYF KG NVLL++DS+TRFA + REIA GE P RGYP SVF++LP+L Sbjct: 242 AAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKL 301 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 +ER G E G+ITA +VL +GD+ DPIADS R +LDGH VL+R LAEEG YP +D Sbjct: 302 VERAGNGEPGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDI 361 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 AS+SR+ + D + L R ++RD+ +G Y G D+ D A+ P + Sbjct: 362 EASISRVMPQVVDPDHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDVETDLAIALQPKL 421 Query: 414 YDFLKQS 420 DFL+Q Sbjct: 422 VDFLRQG 428 >gi|76808788|ref|YP_331828.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 1710b] gi|167892349|ref|ZP_02479751.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 7894] gi|167909062|ref|ZP_02496153.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 112] gi|254260525|ref|ZP_04951579.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 1710a] gi|76578241|gb|ABA47716.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 1710b] gi|254219214|gb|EET08598.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 1710a] Length = 526 Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+D L K D + S P ++R+ + G+R I+ + G Sbjct: 186 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 243 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 244 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 303 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A T+AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 304 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 363 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 364 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 423 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 424 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 483 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 484 AQLDRAIALYPRIESFLQQ 502 >gi|53717869|ref|YP_106855.1| flagellum-specific ATP synthase [Burkholderia pseudomallei K96243] gi|53724862|ref|YP_104750.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC 23344] gi|67641492|ref|ZP_00440269.1| flagellar protein export ATPase FliI [Burkholderia mallei GB8 horse 4] gi|121599361|ref|YP_994237.1| flagellum-specific ATP synthase FliI [Burkholderia mallei SAVP1] gi|124385098|ref|YP_001028109.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC 10229] gi|126438671|ref|YP_001057272.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 668] gi|126449561|ref|YP_001082919.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC 10247] gi|126453967|ref|YP_001064514.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 1106a] gi|134283677|ref|ZP_01770376.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei 305] gi|167004334|ref|ZP_02270094.1| flagellum-specific ATP synthase FliI [Burkholderia mallei PRL-20] gi|167736641|ref|ZP_02409415.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 14] gi|167822254|ref|ZP_02453725.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 9] gi|167843849|ref|ZP_02469357.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei B7210] gi|167900844|ref|ZP_02488049.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei NCTC 13177] gi|167917102|ref|ZP_02504193.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei BCC215] gi|217425054|ref|ZP_03456550.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 576] gi|226199777|ref|ZP_03795328.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei Pakistan 9] gi|237810409|ref|YP_002894860.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei MSHR346] gi|242314340|ref|ZP_04813356.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 1106b] gi|254175108|ref|ZP_04881769.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC 10399] gi|254182186|ref|ZP_04888783.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 1655] gi|254188116|ref|ZP_04894628.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei Pasteur 52237] gi|254196347|ref|ZP_04902771.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei S13] gi|254201852|ref|ZP_04908216.1| flagellum-specific ATP synthase FliI [Burkholderia mallei FMH] gi|254207181|ref|ZP_04913532.1| flagellum-specific ATP synthase FliI [Burkholderia mallei JHU] gi|254295771|ref|ZP_04963228.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 406e] gi|52208283|emb|CAH34215.1| flagellum-specific ATP synthase [Burkholderia pseudomallei K96243] gi|52428285|gb|AAU48878.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC 23344] gi|121228171|gb|ABM50689.1| flagellum-specific ATP synthase FliI [Burkholderia mallei SAVP1] gi|124293118|gb|ABN02387.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC 10229] gi|126218164|gb|ABN81670.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 668] gi|126227609|gb|ABN91149.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 1106a] gi|126242431|gb|ABO05524.1| flagellum-specific ATP synthase FliI [Burkholderia mallei NCTC 10247] gi|134245086|gb|EBA45181.1| flagellum-specific ATP synthase FliI [Burkholderia pseudomallei 305] gi|147747746|gb|EDK54822.1| flagellum-specific ATP synthase FliI [Burkholderia mallei FMH] gi|147752723|gb|EDK59789.1| flagellum-specific ATP synthase FliI [Burkholderia mallei JHU] gi|157806304|gb|EDO83474.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 406e] gi|157935796|gb|EDO91466.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei Pasteur 52237] gi|160696153|gb|EDP86123.1| flagellum-specific ATP synthase FliI [Burkholderia mallei ATCC 10399] gi|169653090|gb|EDS85783.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei S13] gi|184212724|gb|EDU09767.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 1655] gi|217392074|gb|EEC32100.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 576] gi|225928128|gb|EEH24164.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei Pakistan 9] gi|237505470|gb|ACQ97788.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei MSHR346] gi|238522435|gb|EEP85879.1| flagellar protein export ATPase FliI [Burkholderia mallei GB8 horse 4] gi|242137579|gb|EES23981.1| flagellar protein export ATPase FliI [Burkholderia pseudomallei 1106b] gi|243060334|gb|EES42520.1| flagellum-specific ATP synthase FliI [Burkholderia mallei PRL-20] Length = 523 Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+D L K D + S P ++R+ + G+R I+ + G Sbjct: 183 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 240 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 241 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 300 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A T+AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 301 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 360 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 361 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 420 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 421 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 480 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 481 AQLDRAIALYPRIESFLQQ 499 >gi|325981188|ref|YP_004293590.1| flagellar protein export ATPase FliI [Nitrosomonas sp. AL212] gi|325530707|gb|ADZ25428.1| flagellar protein export ATPase FliI [Nitrosomonas sp. AL212] Length = 466 Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 146/340 (42%), Positives = 207/340 (60%), Gaps = 7/340 (2%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV+N +G+P+D LG + S+ + S+ + R V + G+R I+ + Sbjct: 127 GRVLNGVGEPLD---RLGPTHAEHSVPLYSRPFNPLERTPVSEPLDVGVRAINTLLTVGR 183 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE+ LG + L +SVV Sbjct: 184 GQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIENILGKEGLARSVV 243 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP+LR A IAEYF G +VLLI+DS+TR+A + REI+ GE P Sbjct: 244 VAAPADTSPLLRLQGAAYATAIAEYFRDSGKHVLLIMDSLTRYAMAQREISLAIGEPPAT 303 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP+L+ER G + G+ITA +VL +GD+ NDPI DS R+ILDGHIVL+ Sbjct: 304 KGYPPSVFAKLPQLVERAGNGNQAGGSITAFYTVLAEGDDQNDPIVDSARAILDGHIVLS 363 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LAE G YP +D AS+SR+ + + L R++ + D+ +G Y G Sbjct: 364 RRLAEAGHYPAIDIEASISRVMTSVVPPKQIDMARQFKSLYARYQRSHDLISVGAYVAGT 423 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 D LD+A+ P FL Q+ S + D ++TK + Sbjct: 424 DPELDRAIRLYPSFEKFLHQTMSQYENFADSLVKLTKLFE 463 >gi|327481266|gb|AEA84576.1| flagellum-specific ATP synthase [Pseudomonas stutzeri DSM 4166] Length = 452 Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 147/354 (41%), Positives = 219/354 (61%), Gaps = 7/354 (1%) Query: 70 VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 +Y+ PVG I+ G V + GR + S GRV++ G+ +DG + D + Sbjct: 77 LYLMPVGSLAGIAPGARVVPLVNTGRLPMGMS--MLGRVLDGAGRALDGKGGMRAEDW-V 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + V + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 134 PMDGPVINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +++ L+GERGREV+EFIE+ LG+ ++K+SVVV + +D++P++R A IAEYF Sbjct: 194 ADIIVVGLIGERGREVKEFIENILGEESIKRSVVVASPADDAPLMRLRAAQYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TR+A + REIA GE P +GYP SVF++LP L+ER G +E+ G Sbjct: 254 RDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPSLVERAGNAEQGGG 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIAD+ R +LDGHIVL+R LAEEG YP +D AS+SR+ + Sbjct: 314 SITAFYTVLSEGDDQQDPIADAARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPQVV 373 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 SA+ + L R++++RD+ +G Y PG D D A+ + + +L+Q Sbjct: 374 SAEHVRASQRFKQLWSRYQQSRDLISVGAYVPGGDPETDMAIARQAEMVSYLRQ 427 >gi|167724372|ref|ZP_02407608.1| type III secretion system ATPase [Burkholderia pseudomallei DM98] gi|167898947|ref|ZP_02486348.1| type III secretion system ATPase [Burkholderia pseudomallei 7894] Length = 442 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 167/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%) Query: 5 LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59 L L+++A+ + L ++ G + V T V + LG+ +G + + Sbjct: 4 LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG Sbjct: 64 AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 243 ATAIAEYFRDQGQRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+ Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420 Query: 418 KQSPSDLSSED 428 Q + S D Sbjct: 421 NQRTDEYSPPD 431 >gi|38674625|gb|AAR26330.1| AscN [Aeromonas hydrophila] Length = 440 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 160/408 (39%), Positives = 232/408 (56%), Gaps = 20/408 (4%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79 VV G I + + LS + F HQ + LG++ I+ + + P G Sbjct: 39 VVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQALLTP-LGEMFGISSN-TEVSPTGAMH 96 Query: 80 EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 ++ +G+ + G+V++ LG P G L + + PP M+R+ Sbjct: 97 QVGVGEHLL--------------GQVLDGLGNPFAGGH-LPEPAAWYPVYRDAPPPMSRK 141 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ + GIR ID GQR+G+FA +G GKSTLL+ RS D +++L+GERG Sbjct: 142 RIAQPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG 201 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVREFIE LG+ LKK+V+VVATSD + R A A +IAEYF +G VLL++DS Sbjct: 202 REVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDS 261 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI +GE P RGYP SVF+ LPRL+ER G S +KG+ITA+ +VLV+GD Sbjct: 262 VTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGD 319 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ + + L Sbjct: 320 DMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQAGRLRS 379 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + ++EE + IG Y+ G D + D+A+ ++ I +LKQ + SS Sbjct: 380 WLAKYEEVELLLQIGEYQKGQDKVADEAIARIEAIRQWLKQGTHEPSS 427 >gi|160875386|ref|YP_001554702.1| type III secretion system ATPase [Shewanella baltica OS195] gi|160860908|gb|ABX49442.1| ATPase, FliI/YscN family [Shewanella baltica OS195] gi|315267586|gb|ADT94439.1| ATPase, FliI/YscN family [Shewanella baltica OS678] Length = 443 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 162/368 (44%), Positives = 222/368 (60%), Gaps = 8/368 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D + P + + G+LV G P GRV++ LG P+DG Sbjct: 65 EVVAVKGDEALLSPFDVTAGLCSGELVETLGHGHQVPLGQGLLGRVVDGLGAPMDG---Y 121 Query: 120 GKGDLSMEI-MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 G S+ P ++RQ ++ GIR ID GQRIG+FA +G GKSTLL Sbjct: 122 GLTATSLRPNQGSAPNPLSRQLIDTVMPMGIRAIDSALACGIGQRIGIFAAAGGGKSTLL 181 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237 M A D ++++LVGERGREVREFIE L + ++V+VVATSD P+ R A LT Sbjct: 182 GMIAAHCQADVIVLTLVGERGREVREFIEYNLTPEARARTVMVVATSDRPPLERMKATLT 241 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A TIAEYF +G NVLL++DS+TRFA S REIA +GE PV+ GYP SVF L L+ER Sbjct: 242 ATTIAEYFRDQGKNVLLMVDSLTRFARSAREIALAAGESPVSSGYPPSVFVNLSALVERA 301 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 GP+ KG+IT + +VLV+GD+ N+PIAD VRS+LDGHIVL+R LA G YP +D ASV Sbjct: 302 GPA--AKGSITGIYTVLVEGDDMNEPIADEVRSLLDGHIVLSRRLAGAGHYPAIDINASV 359 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ D+ S +++ + + L+ ++E + + +G Y G D D+AV + I FL Sbjct: 360 SRVMDQIVSPEQRCNAAKMRQLLALYQEVQLLIRVGEYVQGEDQETDEAVARHQDIQQFL 419 Query: 418 KQSPSDLS 425 QS ++ S Sbjct: 420 CQSVNEFS 427 >gi|197122672|ref|YP_002134623.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K] gi|196172521|gb|ACG73494.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K] Length = 435 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 157/382 (41%), Positives = 218/382 (57%), Gaps = 12/382 (3%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117 +V+ + D + P G + L V GR R P GRV++ LG+P+DG Sbjct: 58 EVVGLRDDRAVLVPFGDLGGVGLDAEVVPTGRPHTIRAGPG--LLGRVLDGLGRPLDGA- 114 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L G + P + R+ V G+RV+D GQRIG+FAGSG+GKSTL Sbjct: 115 PLPAGLEEWAVDRPAPNPLTRRAVAAPLPLGVRVLDGLLTAGEGQRIGLFAGSGVGKSTL 174 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 L AR D ++ LVGERGREVREF+E LG + L +SVVV ATSD ++R A Sbjct: 175 LGQLARGARADLCVVCLVGERGREVREFLEGPLGAEGLARSVVVAATSDAPALVRLKAAH 234 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +AE+F+ +GD VLL++DS+TR+A ++RE+ +GE P +GYP SVF+ LPRLLER Sbjct: 235 VATAVAEWFAERGDRVLLLVDSVTRYARALREVGLAAGEPPARQGYPPSVFAALPRLLER 294 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + +G ITAV +VLV G + +PIAD VR ILDGH+VL+R++A GR+P VDPL S Sbjct: 295 AG--NRARGGITAVYTVLVAGGDLEEPIADEVRGILDGHVVLDRAVAAGGRFPAVDPLQS 352 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ + + L+ RD+ +G YR G D D A+ ++P I F Sbjct: 353 LSRVMPAVAAPAHLAAAGRVRALLAAHARVRDLVALGAYRAGADPEADLALARLPAIEAF 412 Query: 417 LKQSPSDLSSEDVFQEITKKLQ 438 L+Q L +E +L+ Sbjct: 413 LRQP---LGEAAPLEETLGRLE 431 >gi|33596839|ref|NP_884482.1| type III secretion system ATPase [Bordetella parapertussis 12822] gi|33573540|emb|CAE37531.1| putative ATP synthase in type III secretion system [Bordetella parapertussis] Length = 444 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 156/410 (38%), Positives = 236/410 (57%), Gaps = 16/410 (3%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75 L ++G + + ++ V + + VCL + + G++ + G+V+ D + P+ Sbjct: 20 TLRIKGRVVQVVGTIIKAVVPMVKIGEVCL---LRNPGEDFEMHGEVVGFVRDAALLTPI 76 Query: 76 GIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME----IMS 130 G IS V GR + P GRV++ LG+P+D +S G L + + Sbjct: 77 GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAES---GPLHAHKFYPVFA 133 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 P + R+ + + G+RV+D GQR+G+FA +G GKSTLL M + D Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193 Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +++L+GERGREVREF+E LG + +KSV+V ATSD+S + R A A IAEYF +G Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VL ++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G ++ G+ITA Sbjct: 254 QRVLFLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFATLPKLMERAGMNQT--GSITA 311 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLV+GD+ N+P+AD RSILDGHIVL+R L YP VD LAS SR+ + S Sbjct: 312 LYTVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRH 371 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 K L + L+ ++++ + IG ++ G D D+A+ ++ I FL+Q Sbjct: 372 KYLAGRMRELMAKYQDVELLVKIGEHKQGADASTDEAIQKIGQINAFLRQ 421 >gi|17549091|ref|NP_522431.1| type III secretion system ATPase [Ralstonia solanacearum GMI1000] gi|17431342|emb|CAD18021.1| hrp conserved protein hrcn [Ralstonia solanacearum GMI1000] gi|219566960|dbj|BAH04991.1| type III secretion system ATPase [Ralstonia solanacearum] Length = 439 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 144/327 (44%), Positives = 201/327 (61%), Gaps = 4/327 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG+P DG L + + + + P M R+ VE TG+RVID L GQ Sbjct: 104 GRVLDGLGRPADGGPPLDVVEY-VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FA +G+GKSTL+ MFAR D +I L+GERGREVREFIE LG + +++SVVV Sbjct: 163 RMGIFAPAGVGKSTLMGMFARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVC 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD S + R A +AEYF +G VLL++DS+TRFA + REI +GE P RG Sbjct: 223 ATSDRSAVERAKAAYVGTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF+ELPRLLER G S G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R Sbjct: 283 FPPSVFAELPRLLERAGMS--AAGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRD 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A RYP +D L S+SR+ + D + L+ ++ E + +G Y+ G D Sbjct: 341 IAARNRYPAIDILNSLSRVMTQVMPRDHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDP 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 + D AV + FL+Q + S D Sbjct: 401 VADAAVQWNDWMESFLRQRTDEWCSPD 427 >gi|187925743|ref|YP_001897385.1| flagellar protein export ATPase FliI [Burkholderia phytofirmans PsJN] gi|187716937|gb|ACD18161.1| flagellar protein export ATPase FliI [Burkholderia phytofirmans PsJN] Length = 549 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 143/325 (44%), Positives = 203/325 (62%), Gaps = 10/325 (3%) Query: 101 W--CGRVINALGKPIDGDDSLGK---GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 W GRV++A G+P+DG LG LS +++ +NR+ + K G+R I+ Sbjct: 206 WELLGRVLDASGRPLDGLGPLGAHADAPLSAPVINP----LNREPIHKVLDVGVRAINAL 261 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214 + GQR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG+ L Sbjct: 262 LTVGRGQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEEGL 321 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +SVV+ A +D SP+LR A + ++AEYF +G +VLL++DS+TR+A + REIA G Sbjct: 322 ARSVVIAAPADVSPLLRMQAASYSTSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAVG 381 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 382 EPPATKGYPPSVFAKLPALVERTGNGPAGGGSITAFYTVLTEGDDQQDPIADSARAILDG 441 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+RSLAE G YP +D AS+SR + ++ R++ RD+ +G Sbjct: 442 HIVLSRSLAEAGHYPAIDIEASISRAMTALIDDNHLDKTRMFKQMLSRYQRNRDLINVGA 501 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LD+A+ P + FL+Q Sbjct: 502 YSSGRDALLDRAIALYPRMEAFLQQ 526 >gi|296536940|ref|ZP_06898966.1| possible H(+)-transporting two-sector ATPase [Roseomonas cervicalis ATCC 49957] gi|296262733|gb|EFH09332.1| possible H(+)-transporting two-sector ATPase [Roseomonas cervicalis ATCC 49957] Length = 312 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 136/305 (44%), Positives = 199/305 (65%), Gaps = 4/305 (1%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R R+ G+R +D F + GQR+G+FA SG+GKSTLLSM AR D ++ LVGE Sbjct: 1 RARLGPRLDLGVRALDAFCTMRRGQRLGLFAASGVGKSTLLSMLARGAECDVAVLCLVGE 60 Query: 198 RGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGRE+REFIED LG+ L +SVV+ ATSD P++R+ A A+T+AE ++ G +VLL++ Sbjct: 61 RGRELREFIEDDLGEAGLARSVVICATSDTPPLMRREAAYAAMTVAESLANDGRHVLLMM 120 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS-EKEKGNITAVISVLV 315 DS+TRFA + REI +GE P RGY VF+ELPRLLER GP E + G IT + +VLV Sbjct: 121 DSVTRFALACREIGLAAGEPPATRGYTPGVFAELPRLLERAGPCLEGQGGAITGLFTVLV 180 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 +GD+H++PIAD+VR ILDGH+VL+R + E GR+P +D L S+SR +E++++ Sbjct: 181 EGDDHDEPIADAVRGILDGHVVLDRKIGERGRWPAIDILRSLSRTVPGCLEPEEREVMQR 240 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD--LSSEDVFQEI 433 L+ + ++ +G YR G D +D+A+ P I FL+Q + +++ + F + Sbjct: 241 ARRLLSLQADMAELVRLGAYRAGTDPAVDEALRLAPRIEAFLRQRKDEPLMTTAESFAAL 300 Query: 434 TKKLQ 438 + +Q Sbjct: 301 AEAMQ 305 >gi|88813204|ref|ZP_01128444.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN [Nitrococcus mobilis Nb-231] gi|88789526|gb|EAR20653.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN [Nitrococcus mobilis Nb-231] Length = 457 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 146/369 (39%), Positives = 222/369 (60%), Gaps = 19/369 (5%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC---------GRVINALGK 111 +V+ D +Y+ P G SL L + R+ P A C GRV++ G+ Sbjct: 67 EVVGFAGDKLYLMPTG-----SLHGLTPNA---RVIPHAEACEARVGTGLLGRVLDGAGR 118 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 P+DG L + D +M ++ + + R +++ GIR I+ + GQR+G+FAGSG Sbjct: 119 PLDGK-KLPRADATMPLVGRSINPLLRAPIQRPLDVGIRTINALLTVGRGQRMGLFAGSG 177 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 +GKS LL M R D V++ L+GERGREV+EFI+ LGD L ++VV+ A +D SP++ Sbjct: 178 VGKSVLLGMMTRYTTADIVVVGLIGERGREVKEFIDHILGDEGLSRAVVIAAPADTSPLM 237 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R L +IAEYF +G VLL++DS+TR+A + REI GE P +GYP SVF++L Sbjct: 238 RLHGALLTSSIAEYFRDRGCQVLLLMDSLTRYAQAQREIGLAIGEPPTTKGYPPSVFAKL 297 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 P+L+ER G + G+ITA +VL +GD+HNDP+AD+ R+ILDGH+VL+R LA+ G YP Sbjct: 298 PQLVERAGNGPVDGGSITAFYTVLTEGDDHNDPVADAARAILDGHVVLSRELADAGHYPA 357 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410 +D AS SR +A++ K V +L + + +D+ +G Y+ G + +D+A+ Sbjct: 358 IDIEASASRAMLNIITAEQLKAVHRFKNLYSLYRQNQDLINVGAYKAGSNARVDEAMAYQ 417 Query: 411 PIIYDFLKQ 419 P + +L+Q Sbjct: 418 PELVRYLRQ 426 >gi|304414272|ref|ZP_07395640.1| type III secretion system ATPase [Candidatus Regiella insecticola LSR1] gi|304283486|gb|EFL91882.1| type III secretion system ATPase [Candidatus Regiella insecticola LSR1] Length = 446 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 154/364 (42%), Positives = 221/364 (60%), Gaps = 6/364 (1%) Query: 58 NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGD 116 L +V+ I + + P + +S G V R++ + GR+++ LG+PID Sbjct: 66 TLVEVVAIEQQVALLSPFSSSDGLSSGQSVSPLKHAHRVAVGSRLKGRILDGLGQPIDEG 125 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 +L KG E+ + P + R+ +EK F TGIR ID GQRIG+FA +G+GKST Sbjct: 126 SAL-KGHWR-ELDNSPPDPLTRKPIEKPFITGIRSIDAMLCCGEGQRIGIFAAAGVGKST 183 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235 LLSM + D ++++L+GERGREVREF+E L + +++VVVATSD + R Sbjct: 184 LLSMLCENSDADVMVLALIGERGREVREFLEQVLTPEARARTIVVVATSDRPALERLKGV 243 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 T TIAEYF +G VLL++DS+TR+A + REI +GE P A +P SVF+ +PRLLE Sbjct: 244 YTGTTIAEYFRERGLKVLLMVDSLTRYARAAREIGLAAGEAPAAGSFPPSVFAAMPRLLE 303 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G S + G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA G YP +D A Sbjct: 304 RTGNSAR--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRQLAGAGHYPAIDIAA 361 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 SVSR+ + SA L L + R++E + +G Y+ G D D+A+ + P + Sbjct: 362 SVSRIMPQVVSAKHMALAQKLRLIQARYQEIELLVRVGEYKTGQDPEADEALKRYPAVCA 421 Query: 416 FLKQ 419 FL+Q Sbjct: 422 FLQQ 425 >gi|15596301|ref|NP_249795.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa PAO1] gi|107100555|ref|ZP_01364473.1| hypothetical protein PaerPA_01001580 [Pseudomonas aeruginosa PACS2] gi|116049033|ref|YP_792165.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa UCBPP-PA14] gi|218892932|ref|YP_002441801.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa LESB58] gi|254239473|ref|ZP_04932795.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 2192] gi|296390530|ref|ZP_06880005.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa PAb1] gi|313106066|ref|ZP_07792324.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 39016] gi|81541593|sp|Q9I4N1|FLII_PSEAE RecName: Full=Flagellum-specific ATP synthase gi|9947021|gb|AAG04493.1|AE004540_13 flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa PAO1] gi|115584254|gb|ABJ10269.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa UCBPP-PA14] gi|126192851|gb|EAZ56914.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 2192] gi|218773160|emb|CAW28972.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa LESB58] gi|310878826|gb|EFQ37420.1| flagellum-specific ATP synthase FliI [Pseudomonas aeruginosa 39016] Length = 451 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 147/354 (41%), Positives = 215/354 (60%), Gaps = 7/354 (1%) Query: 70 VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 VY+ PVG I+ G V GR + S GRV++ G+ +DG + D Sbjct: 77 VYLMPVGSLAGIAPGARVVPLPDTGRLPMGMS--MLGRVLDGAGRALDGKGGMRAEDWVP 134 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 135 MDGPTINP-LKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTR 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +++ L+GERGREV+EFI++ LG+ LK+SVVV + +D++P++R A IAEYF Sbjct: 194 ADIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDAPLMRLRAAQYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TR+A + REIA GE P +GYP SVF++LP+L+ER G +E G Sbjct: 254 RDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGG 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIAD+ R +LDGH VL+R LAEEG YP +D AS+SR+ + Sbjct: 314 SITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 A+ + L R++++RD+ +G Y G D D A+ + P++ FL+Q Sbjct: 374 EAEHLRDAQRFKQLWSRYQQSRDLISVGAYVAGGDPETDLAIARFPVMRQFLRQ 427 >gi|170722854|ref|YP_001750542.1| flagellum-specific ATP synthase [Pseudomonas putida W619] gi|169760857|gb|ACA74173.1| flagellar protein export ATPase FliI [Pseudomonas putida W619] Length = 452 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 149/355 (41%), Positives = 214/355 (60%), Gaps = 7/355 (1%) Query: 70 VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 +++ PVG I+ G V GR + S GRV++ G+ +DG + K + + Sbjct: 77 IFLMPVGSIAGIAPGARVVPLDDSGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + + +NR + + GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 134 PMDGPIINPLNRDPISQPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 + +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TRFA + REIA GE P RGYP SVF++LP+L+ER G E G Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIADS R +LDGH VL+R LAEEG YP +D AS+SR+ + Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 A+ + L R ++RD+ +G Y G D D A+ P + DFL+Q Sbjct: 374 DANHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQPKLVDFLRQG 428 >gi|222053605|ref|YP_002535967.1| ATPase FliI/YscN [Geobacter sp. FRC-32] gi|221562894|gb|ACM18866.1| ATPase FliI/YscN [Geobacter sp. FRC-32] Length = 443 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 151/365 (41%), Positives = 219/365 (60%), Gaps = 5/365 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + P+G + LG L+ + + GRVI+ LG PID + Sbjct: 61 EVVGFRENKTLLMPLGELRGVGLGSLISVRREKASLGVGPALLGRVIDGLGAPIDDRGPI 120 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G+ + V P M R+ + + GIR I+ GQR+G+ AGSG+GKSTLL Sbjct: 121 ITGEEYPIYATPVNP-MKRRPIRQPLDLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLG 179 Query: 180 MFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M AR D +I+L+GERGRE+REFIE D + LKKSVVVVATSD+ P++R A Sbjct: 180 MIARYTEADVNVIALIGERGRELREFIEKDLQAEGLKKSVVVVATSDQPPLVRMRGAYIA 239 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 TIAEYF ++G VLL++DS TRFA ++RE+ GE P +GY SVF+ LP+LLER G Sbjct: 240 TTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTG 299 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + G+IT + +VLV+GD+ N+PI+D++RSILDGHIVL+R LA YPP+D L S S Sbjct: 300 --NFQNGSITGLYTVLVEGDDFNEPISDAMRSILDGHIVLSRELAARNIYPPIDVLNSAS 357 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + +KL + ++ + + D+ IG Y+PG + +D A+ ++ + +LK Sbjct: 358 RVMMDVTAKNHQKLAGNFKGVLATYRQAEDLINIGAYKPGSNPGIDYALAKIEHMNAYLK 417 Query: 419 QSPSD 423 Q D Sbjct: 418 QDIKD 422 >gi|328947997|ref|YP_004365334.1| ATPase, FliI/YscN family [Treponema succinifaciens DSM 2489] gi|328448321|gb|AEB14037.1| ATPase, FliI/YscN family [Treponema succinifaciens DSM 2489] Length = 449 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 164/388 (42%), Positives = 228/388 (58%), Gaps = 14/388 (3%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPI 113 S L +V+ + V + G + I +G V G P GRVI+A GKP Sbjct: 53 QSSVLAEVVGLEDSSVRLMAYGETKGIEVGCEVVASGHVLEVPVGLSLLGRVIDATGKPY 112 Query: 114 DGDDSLGKGDLSMEI----MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 DG KG++ E ++ P M R+ ++K TG+R ID + GQR+G+FAG Sbjct: 113 DG-----KGEIFPEAYYPALASPPNPMERKPIDKRIVTGVRAIDGILTVGKGQRLGIFAG 167 Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228 SG+GKSTLLSM AR+ D +I L+GERGREV +FI+ LG+ LK+SV+VVATSD+ Sbjct: 168 SGVGKSTLLSMIARNTNADINVIGLIGERGREVMDFIKRDLGEEGLKRSVLVVATSDQPS 227 Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 I R A IAEYF +G +V+L+ DS+TRFAH+ REI +GE P RGYP SVF Sbjct: 228 ISRLRAAYVTTAIAEYFRDQGKDVMLMFDSVTRFAHAQREIGLATGEPPAQRGYPPSVFD 287 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 LP+LLER G + +KG+ITA +VLVDGD+ ++PIAD VR LDGHIVL RSLA Y Sbjct: 288 MLPKLLERTGTN--DKGSITAFYTVLVDGDDMDEPIADKVRGTLDGHIVLQRSLAARQHY 345 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 P +D L S+SRL+ + KK V + I + E ++ G Y+ G +D+A+ Sbjct: 346 PAIDMLTSISRLSKRVSGTCTKKAVQRVRRWISVYSEQEEMINAGVYQKGSSPEIDEAID 405 Query: 409 QVPIIYDFLKQSPS-DLSSEDVFQEITK 435 + +FL Q + ++ ED + +++ Sbjct: 406 HHQAVEEFLCQEENCHITIEDTLKSLSE 433 >gi|254359685|ref|ZP_04975956.1| flagellum-specific ATP synthase FliI [Burkholderia mallei 2002721280] gi|148028899|gb|EDK86831.1| flagellum-specific ATP synthase FliI [Burkholderia mallei 2002721280] Length = 522 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 145/319 (45%), Positives = 199/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+D L K D + S P ++R+ + G+R I+ + G Sbjct: 182 GRVVDASGRPLDNLGPLASKVDAPLTAPSINP--LDREPIHHVLDVGVRAINGLLTVGRG 239 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 240 QRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVV 299 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A T+AEYF +G +VLL++DS+TR+A + REIA GE P + Sbjct: 300 AAPADVSPLLRMQGAAYATTLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATK 359 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 360 GYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSR 419 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 SLAE G YP +D AS+SR V ++ R++ RD+ +G Y PG D Sbjct: 420 SLAEAGHYPAIDIEASISRAMTALIDDAHLDRVRQFKQMLSRYQRNRDLIAVGAYAPGRD 479 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD+A+ P I FL+Q Sbjct: 480 AQLDRAIALYPRIESFLQQ 498 >gi|215488979|ref|YP_002331410.1| translocator EscN [Escherichia coli O127:H6 str. E2348/69] gi|2865290|gb|AAC38383.1| EscN [Escherichia coli] gi|215267051|emb|CAS11496.1| translocator EscN [Escherichia coli O127:H6 str. E2348/69] Length = 446 Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 152/372 (40%), Positives = 218/372 (58%), Gaps = 3/372 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+I+ +G+P++ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLIDGIGRPME 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 SNIVAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ +++ + + LI ++ + IG Y G D DKA+ +I Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421 Query: 415 DFLKQSPSDLSS 426 +F++QS D+SS Sbjct: 422 NFIQQSTKDISS 433 >gi|67640496|ref|ZP_00439300.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia mallei GB8 horse 4] gi|124382980|ref|YP_001025744.1| type III secretion system ATPase [Burkholderia mallei NCTC 10229] gi|126447182|ref|YP_001077828.1| type III secretion system ATPase [Burkholderia mallei NCTC 10247] gi|126457565|ref|YP_001076238.1| type III secretion system ATPase [Burkholderia pseudomallei 1106a] gi|166999374|ref|ZP_02265213.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia mallei PRL-20] gi|167850350|ref|ZP_02475858.1| type III secretion system ATPase [Burkholderia pseudomallei B7210] gi|167907279|ref|ZP_02494484.1| type III secretion system ATPase [Burkholderia pseudomallei NCTC 13177] gi|167923484|ref|ZP_02510575.1| type III secretion system ATPase [Burkholderia pseudomallei BCC215] gi|217422227|ref|ZP_03453730.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 576] gi|237509290|ref|ZP_04522005.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei MSHR346] gi|242313979|ref|ZP_04812996.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1106b] gi|254205055|ref|ZP_04911408.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia mallei JHU] gi|126231333|gb|ABN94746.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1106a] gi|126240036|gb|ABO03148.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei NCTC 10247] gi|147754641|gb|EDK61705.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia mallei JHU] gi|217394458|gb|EEC34477.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 576] gi|235001495|gb|EEP50919.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei MSHR346] gi|238521216|gb|EEP84669.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia mallei GB8 horse 4] gi|242137218|gb|EES23621.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1106b] gi|243064448|gb|EES46634.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia mallei PRL-20] gi|261827070|gb|ABM99373.2| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei NCTC 10229] Length = 442 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 167/431 (38%), Positives = 244/431 (56%), Gaps = 10/431 (2%) Query: 5 LETLAQLAEDYSKNLVVQG--GYISSITSVYYT-VTCLSQYVCLGDFVVHQGKNSDNL-- 59 L L+++A+ + L ++ G + V T V + LG+ +G + + Sbjct: 4 LADLSRVADAMAARLAIEPAVGMTGKVLEVIGTLVRVVGLEATLGELCELRGASGALIQH 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG Sbjct: 64 AEVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGE 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 124 LDY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A Sbjct: 183 GMFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYA 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 243 ATAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERT 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+ Sbjct: 303 GMG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSL 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 361 SRIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFL 420 Query: 418 KQSPSDLSSED 428 Q + S D Sbjct: 421 NQRTDEYSPPD 431 >gi|239826616|ref|YP_002949240.1| flagellum-specific ATP synthase [Geobacillus sp. WCH70] gi|239806909|gb|ACS23974.1| ATPase, FliI/YscN family [Geobacillus sp. WCH70] Length = 426 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 155/368 (42%), Positives = 220/368 (59%), Gaps = 13/368 (3%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P + IS G +V G+ +I G+V++ LG P+DG L KG + I Sbjct: 56 VLLMPFSTVQHISPGCIVEATGKPLQIHVGTPLIGQVLDPLGYPLDGS-PLPKGLHPISI 114 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 P + R + + + G+R+ID + GQR+G+FAGSG+GKSTL+ M AR D Sbjct: 115 ERNPPNPLARPPINEPIEVGVRIIDSLLTVGKGQRVGIFAGSGVGKSTLMGMIARHTNAD 174 Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+L+GERGREVREFIE LG + L +S+VVVATSD+ ++R TA IAEYF Sbjct: 175 INVIALIGERGREVREFIERDLGPEGLARSIVVVATSDQPALMRVKGAYTATAIAEYFRD 234 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G +V+ ++DS+TR A + REI GE P +GY SVF+ LP+LLER G S G I Sbjct: 235 QGMDVMFMMDSVTRVAMAQREIGLAIGEPPTTKGYTPSVFAILPKLLERTGTSAY--GTI 292 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VLVDGD+ N+PIAD+VR ILDGH +L RSLA G+YP ++ L SVSR+ + + Sbjct: 293 TAFYTVLVDGDDMNEPIADTVRGILDGHFILERSLANRGQYPAINVLKSVSRVMNHIITP 352 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 + ++ L L+ + + D+ IG Y+ G +D+A+ P I F KQ Sbjct: 353 EHRQAADKLRQLLSTYINSEDLINIGAYKRGSSNEIDEAIRYYPKIISFCKQ-------- 404 Query: 428 DVFQEITK 435 D+ ++ITK Sbjct: 405 DIHEKITK 412 >gi|167623382|ref|YP_001673676.1| flagellum-specific ATP synthase [Shewanella halifaxensis HAW-EB4] gi|167353404|gb|ABZ76017.1| flagellar protein export ATPase FliI [Shewanella halifaxensis HAW-EB4] Length = 446 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 207/322 (64%), Gaps = 2/322 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G+PIDG +L + ++ + P + R+ + + G+R I+ + GQ Sbjct: 106 GRVLDGSGQPIDGLGNLRTDQKASRHVAAINP-LARRAISEPLDVGVRAINAMLTVGKGQ 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M R D +++ LVGERGREV+EFIE+ LG + +SVVV Sbjct: 165 RMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGPEGRARSVVVA 224 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R A T+ IAEYF G NVLL++DS+TR+A + REIA GE P +G Sbjct: 225 APADTSPLMRLRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKG 284 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP+L+ER G ++G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RS Sbjct: 285 YPPSVFAKLPKLVERAGNGGGQQGSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSRS 344 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G YP +D AS+SR+A S + + + + + +++ +D+ IG Y G D Sbjct: 345 LADSGHYPAIDIEASISRVAPMVISPEHLEAMRKVKQVYSLYQQNKDLISIGAYSQGSDP 404 Query: 402 ILDKAVHQVPIIYDFLKQSPSD 423 +D A+ P + FL+Q+ D Sbjct: 405 RIDNAIRLQPAMNAFLRQTMKD 426 >gi|171321463|ref|ZP_02910409.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria MEX-5] gi|171093261|gb|EDT38463.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria MEX-5] Length = 442 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 155/371 (41%), Positives = 221/371 (59%), Gaps = 5/371 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG L Sbjct: 65 EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGPL 124 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 125 DY-DALRPVLAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A A Sbjct: 184 MFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+S Sbjct: 304 MG--EQGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 362 RIMPQIATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDAAADEAVAKIDRIRTFLN 421 Query: 419 QSPSDLSSEDV 429 Q + + D Sbjct: 422 QRTDEYAPPDA 432 >gi|239817140|ref|YP_002946050.1| ATPase, FliI/YscN family [Variovorax paradoxus S110] gi|239803717|gb|ACS20784.1| ATPase, FliI/YscN family [Variovorax paradoxus S110] Length = 478 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 144/325 (44%), Positives = 203/325 (62%), Gaps = 10/325 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A G+P+DG LG D+S + PP + R ++ G+R I+ + Sbjct: 136 GRVVDAAGRPLDG---LGPLDVSRRVPLGAPPINPLARAPIDSVLDVGVRAINAMLTVGR 192 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219 GQR+G+FAGSG+GKS LL M AR + +++ L+GERGREV++FIE+ LG+ L +SVV Sbjct: 193 GQRMGLFAGSGVGKSVLLGMMARYTSAEVIVVGLIGERGREVKDFIENTLGEEGLARSVV 252 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP+LR A +AEYF +G +VLLI+DS+TR+A + REIA GE P Sbjct: 253 VAAPADNSPLLRLQGAAYATCLAEYFRDQGRDVLLIMDSLTRYAMAQREIALAVGEPPAT 312 Query: 280 RGYPTSVFSELPRLLERIGPSEKEK----GNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +GYP SVF++LP L+ER G ++ G+ITA +VL +GD+ DPIADS R+ILDGH Sbjct: 313 KGYPPSVFAKLPALVERAGNGARDANGRGGSITAFYTVLSEGDDQQDPIADSARAILDGH 372 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 +VL+R+LAE G YP +D AS+SR + V + R++ RD+ +G Y Sbjct: 373 VVLSRTLAEAGHYPAIDIEASISRAMTALIEPSQFDTVRRFKQALSRYQRNRDLISVGAY 432 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420 G D LD+A+ P I FL+QS Sbjct: 433 AAGHDPQLDQAIALYPRIEAFLQQS 457 >gi|167630292|ref|YP_001680791.1| flagellar protein export ATPase flii, putative [Heliobacterium modesticaldum Ice1] gi|167593032|gb|ABZ84780.1| flagellar protein export ATPase flii, putative [Heliobacterium modesticaldum Ice1] Length = 433 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 160/405 (39%), Positives = 233/405 (57%), Gaps = 31/405 (7%) Query: 48 FVVHQGKNSDNLGQVI---------RINLDIV-------YICPVGIGEEISLGDLVFHWG 91 V+ S NLG+V R+ ++V + P+G I G V G Sbjct: 26 LVIQSDGPSANLGEVCLVSTQSGKQRVRSEVVGFREGKTLLMPLGEMGGIGPGSQVLATG 85 Query: 92 R-FRISPSACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 ++ GRV++ LG P+D G GD + + P + R+R+++ G+ Sbjct: 86 DVLTVAVGEALLGRVLDGLGNPLDDGGPIATTGDYPL--TASPPNPLKRKRIQQPLPLGV 143 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 + ID GQR+G+FAGSG+GKSTLL M AR+ D +I L+GERGREVREFIE Sbjct: 144 KAIDGLLTCGRGQRLGIFAGSGVGKSTLLGMIARNTTADINVIGLIGERGREVREFIEKD 203 Query: 210 LG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG + L +SVVVVATSD+ ++R A IAE+F G +V+L++DS+TRFA + RE Sbjct: 204 LGPEGLARSVVVVATSDQPALVRLKGAFVATAIAEFFRDLGKDVMLMMDSVTRFAMAQRE 263 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 + GE P RGY SVF+ LP+LLER G S+K G IT + +VLVDGD+ N+PIAD+V Sbjct: 264 VGLAVGEPPATRGYTPSVFAMLPKLLERSGTSDK--GTITGLYTVLVDGDDMNEPIADAV 321 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R ILDGHIVL+R LA + YP +D L+SVSR+ + S + + + L ++ + E +D Sbjct: 322 RGILDGHIVLSRDLAAQNHYPAIDILSSVSRVMIELVSKEHRDAAAQLRSVLATYREAKD 381 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 + IG Y+ G + +D ++ ++ +FL+Q D+F+ I Sbjct: 382 LIDIGAYQKGANPQIDYSLKKIDACREFLRQ--------DIFEAI 418 >gi|167573412|ref|ZP_02366286.1| type III secretion system ATPase [Burkholderia oklahomensis C6786] Length = 444 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 156/370 (42%), Positives = 221/370 (59%), Gaps = 5/370 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG L Sbjct: 65 EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGDGILGRVIDSFGEPIDGRGPL 124 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 125 DY-DALRPVLAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A A Sbjct: 184 MFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+S Sbjct: 304 MG--ERGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 362 RIMPQITTREHVGTAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRTFLN 421 Query: 419 QSPSDLSSED 428 Q + S D Sbjct: 422 QRTDEYSPPD 431 >gi|229591850|ref|YP_002873969.1| flagellum-specific ATP synthase [Pseudomonas fluorescens SBW25] gi|229363716|emb|CAY51109.1| flagellum-specific ATP synthase [Pseudomonas fluorescens SBW25] Length = 452 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 148/365 (40%), Positives = 217/365 (59%), Gaps = 3/365 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + +++ PVG I+ G V R+ GRV++ G+ +DG + Sbjct: 68 EVMGFSGNKIFLMPVGSLAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGGM 127 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + P +NR + GIR I+ + GQR+G+FAG+G+GKS LL Sbjct: 128 KAEDWVPMDGPTINP-LNRNPISVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLG 186 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238 M R D +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + Sbjct: 187 MMTRFTEADIIVVGLIGERGREVKEFIEHSLGEEGLKRSVVVASPADDAPLMRLRAAMYC 246 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF KG NVLL++DS+TRFA + REIA GE P +GYP SVF++LP+L+ER G Sbjct: 247 TRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAG 306 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 +E G+ITA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+S Sbjct: 307 NAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASIS 366 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + L R++++RD+ +G Y G D D A+ P + +L+ Sbjct: 367 RVMPAVVTPEHMARAQHFKQLWSRYQQSRDLISVGAYVAGGDRDTDLAIALQPQLVTYLR 426 Query: 419 QSPSD 423 Q +D Sbjct: 427 QGLND 431 >gi|290475706|ref|YP_003468595.1| flagellum-specific ATP synthase [Xenorhabdus bovienii SS-2004] gi|289175028|emb|CBJ81831.1| flagellum-specific ATP synthase [Xenorhabdus bovienii SS-2004] Length = 454 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 143/328 (43%), Positives = 202/328 (61%), Gaps = 2/328 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G+P+DG + G ++ + P + R + G+R I+ + GQ Sbjct: 117 GRVLDGSGRPLDGFPAPDTGYRALLTTPPINP-LQRTPISDVLDVGVRAINSLLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + L +SVVV Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGVEGLARSVVVA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR++ + REIA GE P +G Sbjct: 236 APADVSPLLRMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+RS Sbjct: 296 YPPSVFAKLPALVERAGNGVSDGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRS 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR D + V L+ ++ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDNDHYRRVQQFKQLLASYQRNRDLINVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 +LD+A+ P + FL+Q S+ S D Sbjct: 416 LLDRAIQLYPHMAQFLQQGMSERSEYDA 443 >gi|51597645|ref|YP_071836.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP 32953] gi|186896779|ref|YP_001873891.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis PB1/+] gi|51590927|emb|CAH22583.1| Putative flagellum export-specific ATPase [Yersinia pseudotuberculosis IP 32953] gi|186699805|gb|ACC90434.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis PB1/+] Length = 446 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 152/363 (41%), Positives = 209/363 (57%), Gaps = 8/363 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117 QV+ + DI Y+ P + G VF G I S W GRVIN LG+PIDG Sbjct: 60 QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPIDGKG 117 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 LG + + ++ P + R+ V+ G+ I+ + GQR+G+ AGSG+GKS L Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236 L M R D V++ L+GERGREV+EFIE L + KSVVV A +DESP++R A Sbjct: 177 LGMITRYTQADVVVVGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATE 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +IA Y+ KG +VLL++DS+TR+A + REIA + GE P +GYP S FS +PRL E Sbjct: 237 LCHSIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G +TA+ +VL +GD+ DPI D R++LDGHIVL+R LAE G YP +D S Sbjct: 297 AGNSSG-NGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQS 355 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + + K S L + + + +GGY G D + D+AVH P I F Sbjct: 356 ISRCMSQVIGSQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQF 415 Query: 417 LKQ 419 L+Q Sbjct: 416 LRQ 418 >gi|313110384|ref|ZP_07796272.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa 39016] gi|310882774|gb|EFQ41368.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa 39016] Length = 429 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 145/336 (43%), Positives = 208/336 (61%), Gaps = 4/336 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R++ G+V++ LG+P DG + + P M+R+ +E+ G+R Sbjct: 83 GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPQPMSRRLIERPLSLGVR 141 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 ID GQR+G+FA +G GKSTLL+ R+ D +++LVGERGREVREFIE L Sbjct: 142 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 201 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ L++SV+VVATSD + R A A +IAEYF +G VLL++DS+TRFA + REI Sbjct: 202 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 261 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE P RGYP SVF+ LPRL+ER G SE+ G+ITA+ +VLV+GD+ ++P+AD R Sbjct: 262 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 319 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 SILDGHIVL+R LA YP +D L SVSR+ ++ D++ L + ++EE + Sbjct: 320 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 379 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 IG Y+ G D D+A+ ++ I +L+Q + S Sbjct: 380 LKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETS 415 >gi|157961192|ref|YP_001501226.1| flagellum-specific ATP synthase [Shewanella pealeana ATCC 700345] gi|157846192|gb|ABV86691.1| flagellar protein export ATPase FliI [Shewanella pealeana ATCC 700345] Length = 446 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 162/421 (38%), Positives = 242/421 (57%), Gaps = 11/421 (2%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 LAQ + LV G + + V T+ +G + D + +VI + Sbjct: 12 LAQHQQKVHPFLVEASGQLVRV--VGLTLEATGCRAAIGSLCAIETMAGDLIAEVIGFDD 69 Query: 68 DIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 ++Y+ P+ + G V G + ++ GRV++ G PIDG +L K D Sbjct: 70 QLLYLMPIEELRGVLPGAKVTPLGEQSGLNVGLSLLGRVLDGSGLPIDGLGNL-KTD--- 125 Query: 127 EIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 + S PA+N R+ + + G+R I+ + GQR+G+FAGSG+GKS LL M R Sbjct: 126 QKASSHAPAINPLARRAISEPLDVGVRAINSMLTVGKGQRMGLFAGSGVGKSVLLGMMTR 185 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIA 242 D +++ LVGERGREV+EFIE+ LG + +SVVV A +D SP++R A T+ IA Sbjct: 186 GTTADIIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACETSTRIA 245 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 EYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LP+L+ER G Sbjct: 246 EYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGG 305 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 ++G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLA+ G YP +D AS+SR+A Sbjct: 306 KQGSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAP 365 Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422 S + + + + + +++ +D+ IG Y G D +D A+ P + FL+Q+ Sbjct: 366 MVISPEHLEAMRKVKQVYSLYQQNKDLISIGAYSQGSDPRIDNAIRLQPAMNAFLRQTMK 425 Query: 423 D 423 D Sbjct: 426 D 426 >gi|237678820|emb|CAQ57547.1| RhcN protein [Bradyrhizobium elkanii] Length = 451 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 149/360 (41%), Positives = 217/360 (60%), Gaps = 4/360 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDDSL 119 +VI + D V + P+G +S V GR ++ S GRVI++ G+P+DG + Sbjct: 75 EVIGLLPDGVLLTPIGDMVGLSNRAEVVTTGRMQVVSVGPDLLGRVIDSFGRPLDGKGPI 134 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G++ + K P M R+ +E+ F G+RV+D GQRIG++ +G GKSTL+S Sbjct: 135 KAGEVR-PLRGKAPNPMKRRGIEQSFPLGVRVLDGLLTCGEGQRIGIYGDAGCGKSTLMS 193 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239 + D I++L+GERGREVREFIE +LG+ L++SVVVV TSD S + R A Sbjct: 194 QIVKGAAADVTIVALIGERGREVREFIERHLGEALRRSVVVVETSDRSAMERAQCAHMAT 253 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 +AEYF +G V+L++DS+TRF+ ++REI +GE P RG+P SVF+ LP LLER G Sbjct: 254 ALAEYFRDQGLRVVLMMDSLTRFSRAMREIGLAAGEPPTRRGFPPSVFALLPGLLERAGM 313 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 E G+ITA +VLV+GD DPIA+ R ILDGHI+L+R+LA +P +D L+S SR Sbjct: 314 G--EHGSITAFYTVLVEGDGTGDPIAEESRGILDGHIILSRALASREHFPAIDVLSSRSR 371 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + D S +K S L+ R+ E + +G Y+ G D + D+A+ + + FL+Q Sbjct: 372 VMDAIVSVQHRKAASLFRDLLSRYAEAEFLIKVGEYKQGSDPLTDRAIASIEELRTFLRQ 431 >gi|146282926|ref|YP_001173079.1| flagellum-specific ATP synthase [Pseudomonas stutzeri A1501] gi|145571131|gb|ABP80237.1| flagellum-specific ATP synthase FliI [Pseudomonas stutzeri A1501] Length = 459 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 147/354 (41%), Positives = 219/354 (61%), Gaps = 7/354 (1%) Query: 70 VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 +Y+ PVG I+ G V + GR + S GRV++ G+ +DG + D + Sbjct: 84 LYLMPVGSLAGIAPGARVVPLVNTGRLPMGMS--MLGRVLDGAGRALDGKGGMRAEDW-V 140 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + V + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 141 PMDGPVINPLKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 200 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +++ L+GERGREV+EFIE+ LG+ ++K+SVVV + +D++P++R A IAEYF Sbjct: 201 ADIIVVGLIGERGREVKEFIENILGEESIKRSVVVASPADDAPLMRLRAAQYCTRIAEYF 260 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TR+A + REIA GE P +GYP SVF++LP L+ER G +E+ G Sbjct: 261 RDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPSLVERAGNAERGGG 320 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIAD+ R +LDGHIVL+R LAEEG YP +D AS+SR+ + Sbjct: 321 SITAFYTVLSEGDDQQDPIADAARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPQVV 380 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 SA+ + L R++++RD+ +G Y PG D D A+ + + +L+Q Sbjct: 381 SAEHVRASQRFKQLWSRYQQSRDLISVGAYVPGGDPETDMAIARQAEMVSYLRQ 434 >gi|146293669|ref|YP_001184093.1| flagellum-specific ATP synthase [Shewanella putrefaciens CN-32] gi|145565359|gb|ABP76294.1| flagellar protein export ATPase FliI [Shewanella putrefaciens CN-32] gi|319427068|gb|ADV55142.1| flagellar protein export ATPase FliI [Shewanella putrefaciens 200] Length = 445 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/383 (39%), Positives = 229/383 (59%), Gaps = 3/383 (0%) Query: 57 DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115 D + +V+ + +++Y+ P+ + G V G + + GRV++ G P+DG Sbjct: 59 DLVAEVVGFDDELLYLMPIEELRGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDG 118 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 +L + S + P ++R+ + + G+R I+ + GQR+G+FAGSG+GKS Sbjct: 119 LGALQTDQYAPRHNSAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKS 177 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234 LL M R D +++ LVGERGREV+EFIE+ LG+ + +SVV+ A +D SP++R A Sbjct: 178 VLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRA 237 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LPRL+ Sbjct: 238 CETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLV 297 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R+LA+ G YP +D Sbjct: 298 ERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIE 357 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 AS+SR+A S + + + + +++ RD+ IG Y G D +D A+ P + Sbjct: 358 ASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMN 417 Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437 FL+Q+ D S Q + +L Sbjct: 418 AFLRQTMRDAFSFADSQSMLAQL 440 >gi|120598253|ref|YP_962827.1| flagellum-specific ATP synthase [Shewanella sp. W3-18-1] gi|120558346|gb|ABM24273.1| flagellar protein export ATPase FliI [Shewanella sp. W3-18-1] Length = 445 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 150/383 (39%), Positives = 229/383 (59%), Gaps = 3/383 (0%) Query: 57 DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115 D + +V+ + +++Y+ P+ + G V G + + GRV++ G P+DG Sbjct: 59 DLVAEVVGFDDELLYLMPIEELRGVLPGARVIPLGEQTGLKVGLSLLGRVLDGNGVPLDG 118 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 +L + S + P ++R+ + + G+R I+ + GQR+G+FAGSG+GKS Sbjct: 119 LGALQTDQYAPRHNSAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKS 177 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234 LL M R D +++ LVGERGREV+EFIE+ LG+ + +SVV+ A +D SP++R A Sbjct: 178 VLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVIAAPADTSPLMRLRA 237 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LPRL+ Sbjct: 238 CETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLV 297 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R+LA+ G YP +D Sbjct: 298 ERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRALADSGHYPAIDIE 357 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 AS+SR+A S + + + + +++ RD+ IG Y G D +D A+ P + Sbjct: 358 ASISRVAPMVISNEHLEAMRRVKQTYSLYQQNRDLISIGAYAQGSDPRIDNAIRLQPAMN 417 Query: 415 DFLKQSPSDLSSEDVFQEITKKL 437 FL+Q+ D S Q + +L Sbjct: 418 AFLRQTMRDAFSFADSQSMLAQL 440 >gi|313847592|emb|CBY16580.1| putative type III secretion or flagellar-type ATP synthase [Chlamydophila psittaci RD1] gi|328914225|gb|AEB55058.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila psittaci 6BC] Length = 442 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 16/386 (4%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + ++ P+G +S V G I GRV+N LG+PID + Sbjct: 61 EVVGFTQNFAFLSPLGELTGVSPSSEVIPTGMPLYIRAGNGLLGRVLNGLGEPIDSEI-- 118 Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 KG L + + P ++R+++ TG+R ID + GQRIG+FAG+G+GK Sbjct: 119 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 177 Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232 S+LL M AR ++ D +I+L+GERGREVREFIE LG+ +K+SV+VV+TSD+S LR Sbjct: 178 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 237 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LPR Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPR 297 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G S +KG ITA +VLV GD+ N+P+AD V+SILDGH+VL+ +LA+ YP +D Sbjct: 298 LLERSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHVVLSNALAQAYHYPAID 355 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SRL ++++++ ++ +++ + IG YR G D +D A+ + Sbjct: 356 VLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 415 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438 + FLKQ D+ + ++E +++L+ Sbjct: 416 LNRFLKQ---DIHEKTNYEEASQQLR 438 >gi|197120196|ref|YP_002140623.1| flagellum-specific ATPase FliI [Geobacter bemidjiensis Bem] gi|197089556|gb|ACH40827.1| flagellum-specific ATPase FliI [Geobacter bemidjiensis Bem] Length = 434 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 156/391 (39%), Positives = 225/391 (57%), Gaps = 8/391 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINA 108 VH ++ +V+ + + P+G + LG ++ + + GRVI+ Sbjct: 46 VHSEGHAPIPAEVVGFRENKTLLMPLGELRGVGLGSVISVRREKAALGVGPALLGRVIDG 105 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG+PID + D V P M R+ + K GIR I+ GQR+G+ A Sbjct: 106 LGQPIDDKGPIEVADEYPIYALPVNP-MKRRPIRKPLNLGIRAINGLLTCGEGQRVGIMA 164 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDES 227 GSG+GKSTLL M AR D +I+L+GERGRE+REFIE D + L+KSVVVVATSD+ Sbjct: 165 GSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQKEGLRKSVVVVATSDQP 224 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 P++R A TIAEYF ++G VLL++DS TRFA ++RE+ GE P +GY SVF Sbjct: 225 PLVRMRGAYIATTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVF 284 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + LPRLLER G + G+IT + +VLV+GD+ N+PI+D++RSILDGHI+L R LA Sbjct: 285 AALPRLLERTG--NFQGGSITGLYTVLVEGDDFNEPISDAMRSILDGHIILTRELAARNI 342 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YPP+D + S SR+ + + K L L+ + + D+ IG Y+ G + +D AV Sbjct: 343 YPPIDLMNSASRVMSDVATKEHKALAGRFKELLATYRQAEDMINIGAYKSGSNPKIDYAV 402 Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 ++ + +LKQ D+ E F+E L+ Sbjct: 403 AKMEQMIGYLKQ---DVGDEVNFEESIAALE 430 >gi|170022963|ref|YP_001719468.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis YPIII] gi|169749497|gb|ACA67015.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis YPIII] Length = 446 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 152/363 (41%), Positives = 208/363 (57%), Gaps = 8/363 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117 QV+ + DI Y+ P + G VF G I S W GRVIN LG+PIDG Sbjct: 60 QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPIDGKG 117 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 LG + + ++ P + R+ V+ G+ I+ + GQR+G+ AGSG+GKS L Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236 L M R D V++ L+GERGREV+EFIE L + KSVVV A +DESP++R A Sbjct: 177 LGMITRYTQADVVVVGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATE 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 IA Y+ KG +VLL++DS+TR+A + REIA + GE P +GYP S FS +PRL E Sbjct: 237 LCHAIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G +TA+ +VL +GD+ DPI D R++LDGHIVL+R LAE G YP +D S Sbjct: 297 AGNSSG-NGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQS 355 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + + K S L + + + +GGY G D + D+AVH P I F Sbjct: 356 ISRCMSQVIGSQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQF 415 Query: 417 LKQ 419 L+Q Sbjct: 416 LRQ 418 >gi|300697472|ref|YP_003748133.1| type III secretion system ATPase [Ralstonia solanacearum CFBP2957] gi|299074196|emb|CBJ53741.1| type III secretion system ATPase [Ralstonia solanacearum CFBP2957] Length = 439 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 151/371 (40%), Positives = 216/371 (58%), Gaps = 5/371 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 G+V+ + + P +S V GR + A GRV++ LG+P DG Sbjct: 60 GEVVGFSEHFALVAPFSGVTGLSRSTRVVPSGRALSVGIGAGLLGRVLDGLGRPADGGPP 119 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L + + + + P M R+ VE TG+RVID L GQR+G+FA +G+GKSTL+ Sbjct: 120 LDVVE-HVPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQRMGIFAPAGVGKSTLM 178 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I L+GERGREVREFIE LG + +++SVVV ATSD S + R A Sbjct: 179 GMFARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVCATSDRSAVERAKAAHV 238 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 +AEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 239 GTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRGFPPSVFAELPRLLERA 298 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G S G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R +A RYP +D L S+ Sbjct: 299 GMS--STGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRDIAARNRYPAIDILNSL 356 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L+ ++ E + +G Y+ G D + D AV + +FL Sbjct: 357 SRVMTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDPVADAAVQWNDWMEEFL 416 Query: 418 KQSPSDLSSED 428 +Q + S D Sbjct: 417 RQRTDEWCSPD 427 >gi|320201520|gb|EFW76099.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli EC4100B] Length = 438 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 153/382 (40%), Positives = 222/382 (58%), Gaps = 8/382 (2%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P++ Sbjct: 56 SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 115 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 116 SNIAAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 175 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 176 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 235 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 236 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 295 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 296 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 353 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ +++ + + LI + + IG Y G D DKA+ +I Sbjct: 354 LSASRVMHNVVTSEHLRAAAECKKLIATYNNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 413 Query: 415 DFLKQSPSDLSS-----EDVFQ 431 F++QS D+SS E++F+ Sbjct: 414 SFIQQSTKDISSYEKTIENLFK 435 >gi|329942353|ref|ZP_08291163.1| type III secretion apparatus H+-transporting two-sector ATPase [Chlamydophila psittaci Cal10] gi|332286995|ref|YP_004421896.1| type III secretion system ATPase [Chlamydophila psittaci 6BC] gi|325507218|gb|ADZ18856.1| type III secretion system ATPase [Chlamydophila psittaci 6BC] gi|328815263|gb|EGF85251.1| type III secretion apparatus H+-transporting two-sector ATPase [Chlamydophila psittaci Cal10] Length = 410 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 16/386 (4%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + ++ P+G +S V G I GRV+N LG+PID + Sbjct: 29 EVVGFTQNFAFLSPLGELTGVSPSSEVIPTGMPLYIRAGNGLLGRVLNGLGEPIDSEI-- 86 Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 KG L + + P ++R+++ TG+R ID + GQRIG+FAG+G+GK Sbjct: 87 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 145 Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232 S+LL M AR ++ D +I+L+GERGREVREFIE LG+ +K+SV+VV+TSD+S LR Sbjct: 146 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 205 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LPR Sbjct: 206 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPR 265 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G S +KG ITA +VLV GD+ N+P+AD V+SILDGH+VL+ +LA+ YP +D Sbjct: 266 LLERSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHVVLSNALAQAYHYPAID 323 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SRL ++++++ ++ +++ + IG YR G D +D A+ + Sbjct: 324 VLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 383 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438 + FLKQ D+ + ++E +++L+ Sbjct: 384 LNRFLKQ---DIHEKTNYEEASQQLR 406 >gi|332669193|ref|YP_004452201.1| FliI/YscN family ATPase [Cellulomonas fimi ATCC 484] gi|332338231|gb|AEE44814.1| ATPase, FliI/YscN family [Cellulomonas fimi ATCC 484] Length = 444 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 144/333 (43%), Positives = 210/333 (63%), Gaps = 4/333 (1%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ GRV++ LG+PIDG L + + + S+ P + R RV++ G+RV+ Sbjct: 94 LRVPVGPGLLGRVLDGLGRPIDGKGPL-RARAWVPLDSRAPHPLERARVDEPLDLGVRVL 152 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211 D + GQR+G+FAGSG+GKS+LLSM AR + +I+LVGERGREVREF+ED LG Sbjct: 153 DTLVTVGRGQRLGLFAGSGVGKSSLLSMVARGTDAEVSVIALVGERGREVREFLEDDLGP 212 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 + L +SVVV+ATSDE P++R + A IAE +G + +L++DS+TR A + REI Sbjct: 213 EGLARSVVVIATSDEPPLVRLRSAFLATRIAEALRDEGRHAVLMMDSLTRVAMAQREIGL 272 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 + GE P RGYP S F+ L +LLER G G++T + +VLVDGD+HN+PIAD+ RSI Sbjct: 273 SVGEPPATRGYPPSTFALLAQLLERAG--TGATGSVTGLYTVLVDGDDHNEPIADAARSI 330 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGH+VL+R LA G +P VD L S+SR+A + + +++ L ++ + +D+ Sbjct: 331 LDGHVVLDRRLAVAGHFPSVDALGSISRVASRVTTPEQRDAARRLRAVMAARRQAQDLLD 390 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424 +G Y G + ++D AV I FL+Q D+ Sbjct: 391 VGAYVAGSNPLVDAAVTHGRAIDAFLRQDIEDV 423 >gi|312962273|ref|ZP_07776765.1| flagellum-specific ATP synthase [Pseudomonas fluorescens WH6] gi|311283610|gb|EFQ62199.1| flagellum-specific ATP synthase [Pseudomonas fluorescens WH6] Length = 452 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 147/356 (41%), Positives = 212/356 (59%), Gaps = 3/356 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 +++ PVG I+ G V R+ GRV++ G+ +DG + D Sbjct: 77 IFLMPVGSLAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRALDGKGGMKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P +NR + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LNRNPISVPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG + LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHSLGAEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF++LP+L+ER G +E G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ + Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVTP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 + L R++++RD+ +G Y G D D A+ P + +L+Q +D Sbjct: 376 EHMTRAQQFKQLWSRYQQSRDLISVGAYVAGGDRDTDLAIALQPQLVTYLRQGLND 431 >gi|260869686|ref|YP_003236088.1| translocator EscN [Escherichia coli O111:H- str. 11128] gi|221361425|emb|CAX18578.1| Type III secretion system, ATPase, LEE associated [Escherichia coli] gi|257766042|dbj|BAI37537.1| translocator EscN [Escherichia coli O111:H- str. 11128] gi|323178908|gb|EFZ64484.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli 1180] Length = 446 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 153/382 (40%), Positives = 222/382 (58%), Gaps = 8/382 (2%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P++ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 SNIAAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ +++ + + LI + + IG Y G D DKA+ +I Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYNNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421 Query: 415 DFLKQSPSDLSS-----EDVFQ 431 F++QS D+SS E++F+ Sbjct: 422 SFIQQSTKDISSYEKTIENLFK 443 >gi|15596894|ref|NP_250388.1| type III secretion system ATPase [Pseudomonas aeruginosa PAO1] gi|9947670|gb|AAG05086.1|AE004596_12 ATP synthase in type III secretion system [Pseudomonas aeruginosa PAO1] Length = 440 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 145/336 (43%), Positives = 208/336 (61%), Gaps = 4/336 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R++ G+V++ LG+P DG + + P M+R+ +E+ G+R Sbjct: 94 GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPQPMSRRLIERPLSLGVR 152 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 ID GQR+G+FA +G GKSTLL+ R+ D +++LVGERGREVREFIE L Sbjct: 153 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 212 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ L++SV+VVATSD + R A A +IAEYF +G VLL++DS+TRFA + REI Sbjct: 213 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 272 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE P RGYP SVF+ LPRL+ER G SE+ G+ITA+ +VLV+GD+ ++P+AD R Sbjct: 273 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 330 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 SILDGHIVL+R LA YP +D L SVSR+ ++ D++ L + ++EE + Sbjct: 331 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 390 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 IG Y+ G D D+A+ ++ I +L+Q + S Sbjct: 391 LKIGEYQKGQDSEADRAIEKIGAIRQWLRQGTHETS 426 >gi|304408577|ref|ZP_07390198.1| ATPase, FliI/YscN family [Shewanella baltica OS183] gi|307305405|ref|ZP_07585153.1| ATPase, FliI/YscN family [Shewanella baltica BA175] gi|304352398|gb|EFM16795.1| ATPase, FliI/YscN family [Shewanella baltica OS183] gi|306911708|gb|EFN42133.1| ATPase, FliI/YscN family [Shewanella baltica BA175] Length = 443 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 159/367 (43%), Positives = 220/367 (59%), Gaps = 6/367 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + + + P + + G+LV G P GRV++ LG P+DG Sbjct: 65 EVVAVKGNEALLSPFDVTAGLCSGELVETLGHGHQVPLGQGLLGRVVDGLGAPMDGYGLT 124 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + P ++RQ ++ GIR ID GQRIG+FA +G GKSTLL Sbjct: 125 ATALRPNQ--GSAPNPLSRQLIDTVMPMGIRAIDSALACGVGQRIGIFAAAGGGKSTLLG 182 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238 M A D ++++LVGERGREVREFIE L + ++V+VVATSD P+ R A LTA Sbjct: 183 MIAAHCQADVIVLALVGERGREVREFIEYNLTPEARARTVMVVATSDRPPLERMKATLTA 242 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 TIAEYF +G NVLL++DS+TRFA S REIA +GE PV+ GYP SVF L L+ER G Sbjct: 243 TTIAEYFRDQGKNVLLMVDSLTRFARSAREIALAAGESPVSSGYPPSVFVNLSALVERAG 302 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P+ +G+IT + +VLV+GDN N+PIAD VRS+LDGHIVL+R LA G YP +D ASVS Sbjct: 303 PA--AQGSITGIYTVLVEGDNMNEPIADEVRSLLDGHIVLSRRLAGAGHYPAIDINASVS 360 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ D+ S +++ + + L+ ++E + + +G Y G D D+AV + I FL Sbjct: 361 RVMDQIVSPEQRCHAAKMRQLLALYQEVQLLIRVGEYVKGADKETDEAVARHQDIQQFLC 420 Query: 419 QSPSDLS 425 QS ++ S Sbjct: 421 QSVNEFS 427 >gi|54124956|gb|AAV30224.1| AscN [Aeromonas hydrophila] Length = 440 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 153/380 (40%), Positives = 224/380 (58%), Gaps = 20/380 (5%) Query: 48 FVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 F HQ + LG++ I+ + + P G ++ +G+ + G+V++ Sbjct: 67 FAQHQALLTP-LGEMFGISSN-TEVSPTGAMHQVGVGEHLL--------------GQVLD 110 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P G L + + P M+R+R+E+ GIR ID GQR+G+F Sbjct: 111 GLGNPFSGGQ-LPEPAAWYPVYRDAPAPMSRKRIEQPISLGIRAIDGLLTCGEGQRMGIF 169 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 A +G GKSTLL+ RS D +++L+GERGREVREFIE LG+ LKK+V+VVATSD Sbjct: 170 AAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIEADLGEEGLKKAVLVVATSDR 229 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 + R A A +IAEYF +G VLL++DS+TRFA + REI +GE P RGYP SV Sbjct: 230 PAMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSV 289 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F+ LPRL+ER G S +KG+ITA+ +VLV+GD+ +P+AD RSILDGHI+L+R LA Sbjct: 290 FAALPRLMERAGQS--DKGSITALYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAAN 347 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L S SR+ ++ + D + L + ++EE + IG Y+ G D + D+A Sbjct: 348 HYPAIDVLRSASRVMNQIITPDHQAQAGRLRSWLAKYEEVELLLQIGEYQKGQDKVADEA 407 Query: 407 VHQVPIIYDFLKQSPSDLSS 426 + ++ I +L+Q + S+ Sbjct: 408 IARIEAIRQWLRQRTHEPSA 427 >gi|167577319|ref|ZP_02370193.1| type III secretion system ATPase [Burkholderia thailandensis TXDOH] Length = 442 Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 156/371 (42%), Positives = 221/371 (59%), Gaps = 5/371 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG L Sbjct: 65 EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGEL 124 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 125 DY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A A Sbjct: 184 MFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+S Sbjct: 304 MG--ERGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 362 RIMPQIAAREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLN 421 Query: 419 QSPSDLSSEDV 429 Q + S D Sbjct: 422 QRTDEYSPPDA 432 >gi|312967946|ref|ZP_07782158.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli 2362-75] gi|312287507|gb|EFR15415.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli 2362-75] gi|320193811|gb|EFW68444.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli WV_060327] Length = 446 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 151/372 (40%), Positives = 218/372 (58%), Gaps = 3/372 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P++ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 SNIVAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ +++ + + LI ++ + IG Y G D DKA+ +I Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421 Query: 415 DFLKQSPSDLSS 426 +F++QS D+SS Sbjct: 422 NFIQQSTKDISS 433 >gi|53716417|ref|YP_106211.1| type III secretion system ATPase [Burkholderia mallei ATCC 23344] gi|52422387|gb|AAU45957.1| type III secretion cytoplasmic ATPase SctN [Burkholderia mallei ATCC 23344] Length = 429 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 156/370 (42%), Positives = 220/370 (59%), Gaps = 5/370 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG L Sbjct: 52 EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGEL 111 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 112 DY-DALRPVIAAPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 170 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A A Sbjct: 171 MFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 230 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 231 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 290 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+S Sbjct: 291 MG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 348 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 349 RIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLN 408 Query: 419 QSPSDLSSED 428 Q + S D Sbjct: 409 QRTDEYSPPD 418 >gi|116049647|ref|YP_791548.1| type III secretion system ATPase [Pseudomonas aeruginosa UCBPP-PA14] gi|254234796|ref|ZP_04928119.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa C3719] gi|2459981|gb|AAB86534.1| PscN [Pseudomonas aeruginosa] gi|115584868|gb|ABJ10883.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa UCBPP-PA14] gi|126166727|gb|EAZ52238.1| ATP synthase in type III secretion system [Pseudomonas aeruginosa C3719] Length = 440 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 145/336 (43%), Positives = 208/336 (61%), Gaps = 4/336 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R++ G+V++ LG+P DG + + P M+R+ +E+ G+R Sbjct: 94 GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPQPMSRRLIERPLSLGVR 152 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 ID GQR+G+FA +G GKSTLL+ R+ D +++LVGERGREVREFIE L Sbjct: 153 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 212 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ L++SV+VVATSD + R A A +IAEYF +G VLL++DS+TRFA + REI Sbjct: 213 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 272 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE P RGYP SVF+ LPRL+ER G SE+ G+ITA+ +VLV+GD+ ++P+AD R Sbjct: 273 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 330 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 SILDGHIVL+R LA YP +D L SVSR+ ++ D++ L + ++EE + Sbjct: 331 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 390 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 IG Y+ G D D+A+ ++ I +L+Q + S Sbjct: 391 LKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETS 426 >gi|83717873|ref|YP_438941.1| type III secretion system ATPase [Burkholderia thailandensis E264] gi|257142044|ref|ZP_05590306.1| type III secretion system ATPase [Burkholderia thailandensis E264] gi|83651698|gb|ABC35762.1| type III secretion cytoplasmic ATPase SctN [Burkholderia thailandensis E264] Length = 442 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 156/370 (42%), Positives = 221/370 (59%), Gaps = 5/370 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG L Sbjct: 65 EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGEL 124 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 125 DY-DALRPVIAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A A Sbjct: 184 MFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+S Sbjct: 304 MG--ERGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 362 RIMPQIAAREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLN 421 Query: 419 QSPSDLSSED 428 Q + S D Sbjct: 422 QRTDEYSPPD 431 >gi|285018177|ref|YP_003375888.1| flagellum-specific ATP synthase [Xanthomonas albilineans GPE PC73] gi|283473395|emb|CBA15900.1| probable flagellum-specific atp synthase protein [Xanthomonas albilineans] Length = 458 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 145/341 (42%), Positives = 214/341 (62%), Gaps = 12/341 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + G+R I+ P+ G Sbjct: 119 GRVIDSDGVPLDGKGPIRAEGSVGMAGVSINP--LAREPITTPLDVGVRAINALLPIGRG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRYTAADIIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD+ W + + +L L+ + RD+ IG Y+ Sbjct: 357 RVADSGLYPAIDIESSVSRVVQDIADEPW----RLRIRALKRLVSAYSSNRDLITIGAYQ 412 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 G D +D+A+ + P I +FL Q + + Q+ K+L Sbjct: 413 RGNDPAVDEALERWPEIMEFLGQDVAKAADLPHSQDALKRL 453 >gi|163789647|ref|ZP_02184085.1| flagellum-specific ATP synthase [Carnobacterium sp. AT7] gi|159875179|gb|EDP69245.1| flagellum-specific ATP synthase [Carnobacterium sp. AT7] Length = 442 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 165/424 (38%), Positives = 242/424 (57%), Gaps = 9/424 (2%) Query: 17 KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG 76 K+ ++ G +S +T + V L +V ++ + L +V+ + V + P+ Sbjct: 16 KSYYLKMGKVSQVTGLIIKVEGLDAFVGEVCEILIKSSGRVALSEVVGFVDETVLLMPLD 75 Query: 77 IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 E I G LV G+ ++ S G ++ LG+P+D SL + ++ P Sbjct: 76 ELEGIGPGCLVKPTGKTLKVEISEKLLGNTLDGLGRPMD--TSLVVDGVFYDVNRSSPNP 133 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 R++++ TGI+ ID + GQR+G+FAGSG+GKSTLL M AR D ++I L+ Sbjct: 134 FKRKKIKDVMPTGIKAIDGTLTVGEGQRVGIFAGSGVGKSTLLGMMARYIEADIIVIGLI 193 Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREV EFIE LG+ +KSVVV ATSD P++R A TIAEYF +G V+L Sbjct: 194 GERGREVLEFIEKDLGEEGYRKSVVVCATSDMPPLVRLKGASVATTIAEYFRDQGKKVVL 253 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DS+TR A + REI +GE P +GY SVF+ LP+LLER G SE G+ITA +VL Sbjct: 254 MMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFTTLPKLLERSGMSEN--GSITAFYTVL 311 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V+GD+ N+PIADSVR ILDGHIVL+R +A E YP +D S+SRL + + Sbjct: 312 VEGDDMNEPIADSVRGILDGHIVLSRKIASENHYPAIDIQNSISRLMKDITAEKHSETAG 371 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434 L + + +++D+ +G YR G + ++D+AV I DFLKQ + F E+ Sbjct: 372 KLKENMAIYSDSKDLIDVGAYRKGSNPLVDRAVQLNTPIKDFLKQR---VDERYAFDEVV 428 Query: 435 KKLQ 438 +L+ Sbjct: 429 GQLK 432 >gi|94986982|ref|YP_594915.1| type III secretion system ATPase [Lawsonia intracellularis PHE/MN1-00] gi|94731231|emb|CAJ54594.1| Type III secretion component protein SctN [Lawsonia intracellularis PHE/MN1-00] Length = 438 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 160/370 (43%), Positives = 219/370 (59%), Gaps = 6/370 (1%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSME 127 + + P+G + IS V G P GRV+N LG+PIDG L + Sbjct: 69 VALLTPLGDLQGISPSTEVIPTGMVHAIPVGRELLGRVLNGLGEPIDGKAPL-RLRTYYP 127 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + P M R+ +EK G+RV+D GQR+G+FA +G GKSTLLS + Sbjct: 128 VYADPPNPMLRRIIEKPISLGLRVLDGILTCGEGQRMGIFAAAGGGKSTLLSSIIKGTTA 187 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D I++L+GERGREVREFIE LG + LK+SV+VV+TSD S + R + TA IAEYF Sbjct: 188 DVCILALIGERGREVREFIEHDLGAEGLKRSVLVVSTSDRSSMERLKSAYTATAIAEYFR 247 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G VLL++DS+TRF ++REI SGE P RG+P SVFS LP+L+ER G S+K G+ Sbjct: 248 DQGKKVLLLMDSVTRFGRALREIGLASGEPPTRRGFPPSVFSSLPKLMERAGNSDK--GS 305 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA+ +VLV+GD+ +PIAD RSILDGHI+L+R LA YP VD LASVSR+ + + Sbjct: 306 ITALYTVLVEGDDMTEPIADETRSILDGHIILSRKLAAANHYPAVDVLASVSRVMNAIVT 365 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + K+ L + ++ E + IG Y+ G D D A+ I FL+Q + S+ Sbjct: 366 KEHKENAGKLRKYLAKYAEVELLVQIGEYKAGNDPAADDAIKHNKGINAFLQQGLDEKST 425 Query: 427 -EDVFQEITK 435 E Q + K Sbjct: 426 FEQTLQALKK 435 >gi|326204623|ref|ZP_08194479.1| ATPase, FliI/YscN family [Clostridium papyrosolvens DSM 2782] gi|325985190|gb|EGD46030.1| ATPase, FliI/YscN family [Clostridium papyrosolvens DSM 2782] Length = 436 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 161/419 (38%), Positives = 242/419 (57%), Gaps = 8/419 (1%) Query: 25 YISSITSVY-YTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 YI ++ V T+ V +G+ +H + +V+ + V + P+G + Sbjct: 21 YIGKVSKVVGLTIESDGPQVSIGNLCNIHISGGNKLKAEVVGFKDEKVLLMPLGEMLGMG 80 Query: 83 LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 G V G +++ GRV++ LG PID SL + +K P + R+R+ Sbjct: 81 PGSTVSANGDILKVAVGPELIGRVLDGLGNPIDDKGSLQSKHF-YKTDNKPPNPLTRKRI 139 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 + G+R ID + GQR+G+FAGSG+GKSTL+ M AR+ D +I+L+GERGRE Sbjct: 140 SEPLPLGVRAIDGLLTIGKGQRVGIFAGSGVGKSTLMGMVARNTKADINVIALIGERGRE 199 Query: 202 VREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 VREF+E L D L +SVVVVATSD+ ++R + A IAEYF G +VLL++DS+T Sbjct: 200 VREFLEKDLTDEGLARSVVVVATSDQPALIRLKGAMVATAIAEYFRDCGKDVLLLMDSLT 259 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+A + RE+ + GE PV+RGY SVFS P+LLER G S +KG+IT + +VLVDGD+ Sbjct: 260 RYAMAQREVGLSIGEPPVSRGYTPSVFSVFPKLLERAGTS--DKGSITGLYTVLVDGDDL 317 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 +P+ D+ R ILDGHIVL+R++A + YP +D LASVSR+ D KK + + ++ Sbjct: 318 TEPVTDTARGILDGHIVLSRAMANKNHYPAIDVLASVSRVMGDIIDKDHKKSANEIKKIM 377 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438 + D+ IG Y G + +D A+ + I FL+Q + +S ED+ ++ L+ Sbjct: 378 AVHRDAEDLINIGAYVKGSNDKIDYAIENIDDITSFLQQETDEKVSFEDIHSQVLSLLK 436 >gi|296389919|ref|ZP_06879394.1| type III secretion system ATPase [Pseudomonas aeruginosa PAb1] Length = 440 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 145/336 (43%), Positives = 208/336 (61%), Gaps = 4/336 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R++ G+V++ LG+P DG + + P M+R+ +E+ G+R Sbjct: 94 GMHRVAVGEHLLGQVLDGLGRPFDGSPP-AEPAAWYPVYRDAPQPMSRRLIERPLSLGVR 152 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 ID GQR+G+FA +G GKSTLL+ R+ D +++LVGERGREVREFIE L Sbjct: 153 AIDGLLTCGEGQRMGIFAAAGGGKSTLLASLVRNAEVDVTVLALVGERGREVREFIESDL 212 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ L++SV+VVATSD + R A A +IAEYF +G VLL++DS+TRFA + REI Sbjct: 213 GEQGLRRSVLVVATSDRPAMERAKAGFVATSIAEYFRDQGRRVLLLMDSLTRFARAQREI 272 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE P RGYP SVF+ LPRL+ER G SE+ G+ITA+ +VLV+GD+ ++P+AD R Sbjct: 273 GLAAGEPPTRRGYPPSVFAALPRLMERAGQSER--GSITALYTVLVEGDDMSEPVADETR 330 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 SILDGHIVL+R LA YP +D L SVSR+ ++ D++ L + ++EE + Sbjct: 331 SILDGHIVLSRKLAAANHYPAIDVLHSVSRVMNQIVDDDQRHAAGRLREWLAKYEEVELL 390 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 IG Y+ G D D+A+ ++ I +L+Q + S Sbjct: 391 LKIGEYQKGQDSEADQAIEKIGAIRQWLRQGTHETS 426 >gi|167615466|ref|ZP_02384101.1| type III secretion system ATPase [Burkholderia thailandensis Bt4] Length = 388 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 156/371 (42%), Positives = 221/371 (59%), Gaps = 5/371 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG L Sbjct: 11 EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGRGEL 70 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 71 DY-DALRPVIAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 129 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A A Sbjct: 130 MFARGASCDINVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 189 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 190 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 249 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+S Sbjct: 250 MG--ERGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 307 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 308 RIMPQIAAREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRAFLN 367 Query: 419 QSPSDLSSEDV 429 Q + S D Sbjct: 368 QRTDEYSPPDA 378 >gi|167566310|ref|ZP_02359226.1| type III secretion system ATPase [Burkholderia oklahomensis EO147] Length = 444 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 155/370 (41%), Positives = 221/370 (59%), Gaps = 5/370 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG L Sbjct: 65 EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGDGILGRVIDSFGEPIDGRGPL 124 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 125 DY-DALRPVLAPPPNPMSRRMVDASLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +++L+GERGREVREF+E +G D + +SVVV ATSD S I R A A Sbjct: 184 MFARGASCDINVVALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E+G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+S Sbjct: 304 MG--ERGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 362 RIMPQITTREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRTFLN 421 Query: 419 QSPSDLSSED 428 Q + S D Sbjct: 422 QRTDEYSPPD 431 >gi|188991614|ref|YP_001903624.1| flagellum-specific ATP synthase [Xanthomonas campestris pv. campestris str. B100] gi|167733374|emb|CAP51575.1| flagellum-specific ATP synthase [Xanthomonas campestris pv. campestris] Length = 458 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 204/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + G+R I+ P+ G Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD W + + L L+ + RD+ IG Y+ Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D D+A+ + P I DFL Q Sbjct: 413 RGSDPATDEALARWPEIVDFLGQ 435 >gi|172064918|ref|YP_001815630.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria MC40-6] gi|171997160|gb|ACB68077.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria MC40-6] Length = 463 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 158/368 (42%), Positives = 224/368 (60%), Gaps = 10/368 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117 +V+ + D+ + P G +S V R RI P GRVI++LG+PIDG Sbjct: 85 EVVGFSRDVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPR--LLGRVIDSLGEPIDGKG 142 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + D +++ P M+R V+ TG+RV+D L GQR+G+FA +G+GKSTL Sbjct: 143 PL-ECDEWQPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTL 201 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 + MFAR D +I+L+GERGREVREF E LG D + +SVVV ATSD S I R A Sbjct: 202 MGMFARGARCDVNVIALIGERGREVREFCEHILGPDGMARSVVVCATSDRSSIERAKAAY 261 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +AEYF +G VLL++DS+TRFA + REI GE P RG+P S+F+ELPRLLER Sbjct: 262 AATAVAEYFRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLER 321 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G+ITA+ +VL + ++ DPIA+ VR ILDGH++L+R +A + RYP +D L S Sbjct: 322 AGRSAL--GSITALYTVLAEDESGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGS 379 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ + S + + L+ + +E + +G Y+ G D + D+A+ ++ I DF Sbjct: 380 LSRVMTQVVSREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIAKIDAIRDF 439 Query: 417 LKQSPSDL 424 L Q P+DL Sbjct: 440 LGQ-PTDL 446 >gi|89898777|ref|YP_515887.1| type III secretion system ATPase [Chlamydophila felis Fe/C-56] gi|89332149|dbj|BAE81742.1| type III secretory flagellar biosynthesis ATP synthase [Chlamydophila felis Fe/C-56] Length = 442 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 156/386 (40%), Positives = 233/386 (60%), Gaps = 16/386 (4%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ P+G +S V G I GRV+N LG+PID + Sbjct: 61 EVVGFTQHFAFLSPLGELTGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDSEI-- 118 Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 KG L + + P ++R+++ TG+R ID + GQRIG+FAG+G+GK Sbjct: 119 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 177 Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232 S+LL M AR ++ D +I+L+GERGREVREFIE LG+ +K+SV+VV+TSD+S LR Sbjct: 178 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 237 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LPR Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPR 297 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G S +KG ITA +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+ YP +D Sbjct: 298 LLERSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAID 355 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SRL ++++++ ++ +++ + IG YR G D +D A+ + Sbjct: 356 VLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDRGVDFAIDHIDK 415 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438 + FLKQ D+ + ++E +++L+ Sbjct: 416 LNRFLKQ---DIHEKTNYEEASQQLR 438 >gi|238916749|ref|YP_002930266.1| Na+-transporting two-sector ATPase [Eubacterium eligens ATCC 27750] gi|238872109|gb|ACR71819.1| Na+-transporting two-sector ATPase [Eubacterium eligens ATCC 27750] Length = 449 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 152/373 (40%), Positives = 230/373 (61%), Gaps = 7/373 (1%) Query: 50 VHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 ++ NS L +V+ N V + P + + I G +V + + + G ++ Sbjct: 47 IYSADNSQELYAEVVGFNDSSVLLMPFDVVDGIGPGCVVENMEKPLTVKVGDGILGHTLD 106 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P DG + + +E + P M+R+ + + G++ +D + GQRIG+F Sbjct: 107 GLGNPTDGSELELTDEYPVE--AAPPDPMDREIISQVLPLGVKAVDGLLTVGKGQRIGIF 164 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226 AGSG+GKSTLL MFAR+ D +I+L+GERGREVREF+E LG + + +SV+VVATSD+ Sbjct: 165 AGSGVGKSTLLGMFARNTKADINVIALIGERGREVREFVERDLGPEGMARSVLVVATSDK 224 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R A TA IAEYF +G +VLL++DS+TRF+ + REI SGE PV RGYP SV Sbjct: 225 PALIRNKAAKTATAIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVTRGYPPSV 284 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +SE+P+LLER G S +KG+IT + +VLVDGD+ N+PI D+ RSILDGHIVL+R L ++ Sbjct: 285 YSEMPKLLERAGMS--DKGSITGLYTVLVDGDDFNEPITDTARSILDGHIVLSRKLGQKN 342 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L S+SR + K++ + +++ + E D+ IG Y+ G + +D A Sbjct: 343 HYPAIDVLQSISRCMSQIVDRQHKQMAGRMKNVMATYNEAEDLINIGAYKSGSNKNIDYA 402 Query: 407 VHQVPIIYDFLKQ 419 ++++ + FL Q Sbjct: 403 IYKIDTVNKFLMQ 415 >gi|126176164|ref|YP_001052313.1| FliI/YscN family ATPase [Shewanella baltica OS155] gi|125999369|gb|ABN63444.1| ATPase, FliI/YscN family [Shewanella baltica OS155] Length = 449 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 155/385 (40%), Positives = 234/385 (60%), Gaps = 16/385 (4%) Query: 45 LGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD +G+N + +V+ + D++ + P+ + + G V I+ Sbjct: 43 MGDRCQIEGRNGRLIEAEVVGFHRDVLCLMPIEPTQGLMPGARVLPITDEQTIAIGDGLL 102 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA------MNRQRVEKGFKTGIRVIDIFT 156 GRV++ LG+P+D SLG DL+ +S+VP + + RQ + + GIR I+ Sbjct: 103 GRVLDGLGQPLD---SLG--DLT--DISQVPQSHTSYNPLLRQPIRQPLDVGIRAINSLL 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 P+ GQR+G+FAGSG+GKS LL M R D V++ L+GERGREVREFIE+ LG+ K Sbjct: 156 PIGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVREFIEETLGEEGRK 215 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++V++ A +D +P++R A + +IA F +G VLL++DS+TR+A + REIA + GE Sbjct: 216 RAVIIAAPADTTPLMRLRAMRLSHSIACAFRDQGKQVLLLVDSLTRYAQAQREIALSLGE 275 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +GYP S F++LPRL+E G E G +TA +VL +GD+ DP+AD+ R+ILDGH Sbjct: 276 PPATKGYPPSAFAQLPRLVEMAGNGEHPTGTLTAFYTVLAEGDDQQDPVADAARAILDGH 335 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL+R LAE+G +P +D ASVSRLA ++ + HL+ R+ E RD+ +GGY Sbjct: 336 IVLSRKLAEQGHFPAIDINASVSRLAMHIATSSSIEQSQIFRHLLSRYNEVRDLLPLGGY 395 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420 + G D +D AV P + FL+Q+ Sbjct: 396 QAGQDPEMDLAVRVYPEMARFLRQT 420 >gi|62184683|ref|YP_219468.1| type III secretion system ATPase [Chlamydophila abortus S26/3] gi|62147750|emb|CAH63494.1| putative type III secretion or flagellar-type ATP synthase [Chlamydophila abortus S26/3] Length = 442 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 155/386 (40%), Positives = 234/386 (60%), Gaps = 16/386 (4%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + ++ P+G +S V G I GRV+N LG+PID + Sbjct: 61 EVVGFTQNFAFLSPLGELTGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDSEI-- 118 Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 KG L + + P ++R+++ TG+R ID + GQRIG+FAG+G+GK Sbjct: 119 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 177 Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232 S+LL M AR ++ D +I+L+GERGREVREFIE LG+ +K+SV+VV+TSD+S LR Sbjct: 178 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 237 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LPR Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPR 297 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G S +KG ITA +VLV GD+ N+P+AD V+SILDGH+VL+ +LA+ YP +D Sbjct: 298 LLERSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHVVLSNALAQAYHYPAID 355 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SRL ++++++ ++ +++ + IG YR G D +D A+ + Sbjct: 356 VLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 415 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438 + FLKQ D+ + ++E +++L+ Sbjct: 416 LNRFLKQ---DIHEKTNYEEASQQLR 438 >gi|322421732|ref|YP_004200955.1| FliI/YscN family ATPase [Geobacter sp. M18] gi|320128119|gb|ADW15679.1| ATPase, FliI/YscN family [Geobacter sp. M18] Length = 441 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 155/391 (39%), Positives = 228/391 (58%), Gaps = 20/391 (5%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINA 108 VH ++ +V+ + + P+G + LG ++ + + GRVI+ Sbjct: 47 VHSEGHAPIPAEVVGFRDNKTLLMPLGELRGVGLGSVISVRREKAALGVGPALLGRVIDG 106 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVP------PAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 LG+PID KG + E++ + P M R+ + K GIR I+ GQ Sbjct: 107 LGEPIDD-----KGPI--EVVDEYPIYALPVNPMKRRPIRKPLNLGIRAINGLLTCGEGQ 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVV 221 R+G+ AGSG+GKSTLL M AR D +I+L+GERGRE+REFIE D + L+KSVVVV Sbjct: 160 RVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQAEGLRKSVVVV 219 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+ P++R A TIAEYF ++G VLL++DS TRFA ++RE+ GE P +G Sbjct: 220 ATSDQPPLVRMRGAYIATTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKG 279 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF+ LPRLLER G + G+IT + +VLV+GD+ N+PI+D++RSILDGHI+L R Sbjct: 280 YTPSVFAALPRLLERTG--NFQGGSITGLYTVLVEGDDFNEPISDAMRSILDGHIILTRE 337 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA YPP+D L S SR+ S + + L + + + D+ IG Y+ G + Sbjct: 338 LAARNIYPPIDLLNSASRVMSDVTSREHRALAGQFKETLATYRQAEDMINIGAYKAGSNA 397 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 +D A+ ++ + +LKQ D++ E+ F+E Sbjct: 398 KIDMAIAKMEQMIAYLKQ---DVADEENFEE 425 >gi|62180006|ref|YP_216423.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127639|gb|AAX65342.1| Secretion system apparatus SsaN [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714473|gb|EFZ06044.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 433 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTAGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPEVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|120597297|ref|YP_961871.1| FliI/YscN family ATPase [Shewanella sp. W3-18-1] gi|146294558|ref|YP_001184982.1| FliI/YscN family ATPase [Shewanella putrefaciens CN-32] gi|120557390|gb|ABM23317.1| ATPase, FliI/YscN family [Shewanella sp. W3-18-1] gi|145566248|gb|ABP77183.1| ATPase, FliI/YscN family [Shewanella putrefaciens CN-32] Length = 449 Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 140/319 (43%), Positives = 204/319 (63%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG+P+D L + + P + RQ + + GIR I+ P+ GQ Sbjct: 103 GRVLDGLGQPLDLFGDLTDVSQVQQSHTSYNPLL-RQPIRQPLDVGIRAINSLLPIGRGQ 161 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221 R+G+FAGSG+GKS LL M R D V++ L+GERGREVREFIE+ LG+ K++V++ Sbjct: 162 RLGLFAGSGVGKSVLLGMMTRFTDADVVVVGLIGERGREVREFIEETLGEEGRKRAVIIA 221 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D +P++R A + +IA F +G VLL++DS+TR+A + REIA + GE P +G Sbjct: 222 APADTTPLMRLRAMRLSHSIACAFRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKG 281 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP S F++LPRL+E G E G +TA +VLV+GD+ DP+AD+ R+ILDGHIVL+R Sbjct: 282 YPPSAFAQLPRLVEMAGNGEHPTGTLTAFYTVLVEGDDQQDPVADAARAILDGHIVLSRK 341 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE+G +P +D ASVSRLA + +A + H++ R+ E RD+ +GGY+ G D Sbjct: 342 LAEQGHFPAIDINASVSRLAMQIATASSIEQSQIFRHILSRYNEVRDLLPLGGYQAGQDP 401 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +D AV P + FL+Q+ Sbjct: 402 EMDLAVRVYPEMAKFLRQT 420 >gi|224584074|ref|YP_002637872.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468601|gb|ACN46431.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 433 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTTGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPEVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|310816825|ref|YP_003964789.1| H+-transporting two-sector ATPase, flagellum-specific [Ketogulonicigenium vulgare Y25] gi|308755560|gb|ADO43489.1| H+-transporting two-sector ATPase, flagellum-specific [Ketogulonicigenium vulgare Y25] Length = 452 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 162/418 (38%), Positives = 236/418 (56%), Gaps = 4/418 (0%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G I T + L+ + LGD + +VIR+ ++ V P G+ + +++ Sbjct: 31 GRILRATGGTLGIAGLAAFSRLGDRITVLAHGGPLQAEVIRVGVEEVTAVPEGVADGVAV 90 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 D V G R P W GRVI+ G +DG L G + ++ PPA R+ + Sbjct: 91 DDRVILQGAPRFCPDDSWIGRVIDPDGAALDGRPLL-HGLVPRDLRQSPPPAAARRAMGA 149 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 +TG V D P+ GQR+G+FAGSG+GKSTLL ARS D ++I LVGERGREVR Sbjct: 150 RLRTGYMVFDTLLPIVQGQRLGLFAGSGVGKSTLLGGLARSIAADVIVIGLVGERGREVR 209 Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 FIE+ LG + ++VVV ATSD +P R+ A T+AEYF +G VLL+LDS+TRF Sbjct: 210 HFIEEVLGPQGMARAVVVAATSDAAPQQRRRCAWAATTVAEYFRDQGRQVLLMLDSVTRF 269 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A + RE+A+ +GE RGYP S + L ER GP ++G+ITA+ SVLV G + + Sbjct: 270 AEAHRELASAAGEAAALRGYPASTGPTIAALCERAGPGMGQQGDITAIYSVLVQGSDMEE 329 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 P+AD +R LDGH++L+R++AE GR+P VD L SVSR A S E L++ + + Sbjct: 330 PVADMLRGTLDGHVILDRAIAESGRFPAVDVLRSVSRSLPAAASLPENALIAEARSHMGQ 389 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS--PSDLSSEDVFQEITKKLQ 438 ++ + G Y G D I+D A+ P + + L QS PS+ ++ +++ L+ Sbjct: 390 YDRAALMIRAGLYVGGSDPIVDAAIAARPGLENLLAQSNLPSNAAAFAALRQVLTPLR 447 >gi|27376927|ref|NP_768456.1| RhcN protein [Bradyrhizobium japonicum USDA 110] gi|12620523|gb|AAG60799.1|AF322012_104 RhcN [Bradyrhizobium japonicum] gi|27350069|dbj|BAC47081.1| RhcN protein [Bradyrhizobium japonicum USDA 110] Length = 451 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/373 (40%), Positives = 221/373 (59%), Gaps = 7/373 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 +VI + D V + P+G +S V GR + ++ GRVI++ G+P+DG + Sbjct: 75 EVIGLLPDGVLLTPIGDMVGLSNRAEVVTTGRMQEVAAGPDLLGRVIDSFGRPLDGKGPI 134 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G+ + + + P M R+ +E+ F G+RV+D GQRIG++ +G GKSTL+S Sbjct: 135 KAGE-ARPLRGRAPNPMKRRAIEQPFPLGVRVLDGLLTCGEGQRIGIYGDAGCGKSTLMS 193 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239 R D I++L+GERGREVREFIE +LG+ L +SVVVV TSD S + R A Sbjct: 194 QIVRGAAADVTIVALIGERGREVREFIERHLGEALHRSVVVVETSDRSAMERAQCAHMAT 253 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 +AEYF +G V+L++DS+TRF+ ++REI +GE P RG+P SVF+ LP LLER G Sbjct: 254 ALAEYFRDQGLRVVLMMDSLTRFSRAMREIGLAAGEPPTRRGFPPSVFALLPGLLERAGM 313 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 E G+ITA +VLV+GD DPIA+ R ILDGHI+L+R+LA +P +D L+S SR Sbjct: 314 G--EHGSITAFYTVLVEGDGTGDPIAEESRGILDGHIILSRALASREHFPAIDVLSSRSR 371 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + D S +K S L+ R+ E + +G Y+ G D + D+A+ + + FL+Q Sbjct: 372 VMDAIVSVPHRKAASFFRDLLSRYAEAEFLIKVGEYKQGSDPLTDRAIASIEQLRAFLRQ 431 Query: 420 SPSDLSSEDVFQE 432 + S F+E Sbjct: 432 GQGEACS---FEE 441 >gi|115360594|ref|YP_777731.1| type III secretion system ATPase [Burkholderia ambifaria AMMD] gi|115285922|gb|ABI91397.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria AMMD] Length = 463 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 158/368 (42%), Positives = 223/368 (60%), Gaps = 10/368 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117 +V+ + D+ + P G +S V R RI P GRVI++LG+PIDG Sbjct: 85 EVVGFSRDVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPR--LLGRVIDSLGEPIDGKG 142 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + D +++ P M+R V+ TG+RV+D L GQR+G+FA +G+GKSTL Sbjct: 143 PL-ECDEWQPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTL 201 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 + MFAR D +I+L+GERGREVREF E LG D + +SVVV ATSD S I R A Sbjct: 202 MGMFARGARCDVNVIALIGERGREVREFCEHILGPDGMARSVVVCATSDRSSIERAKAAY 261 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +AEYF +G VLL++DS+TRFA + REI GE P RG+P S+F+ELPRLLER Sbjct: 262 AATAVAEYFRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLER 321 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G+ITA+ +VL + + DPIA+ VR ILDGH++L+R +A + RYP +D L S Sbjct: 322 AGRSAL--GSITALYTVLAEDETGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGS 379 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ + S + + L+ + +E + +G Y+ G D + D+A+ ++ I DF Sbjct: 380 LSRVMTQVVSREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIAKIDAIRDF 439 Query: 417 LKQSPSDL 424 L Q P+DL Sbjct: 440 LGQ-PTDL 446 >gi|113969628|ref|YP_733421.1| flagellum-specific ATP synthase [Shewanella sp. MR-4] gi|114046858|ref|YP_737408.1| flagellum-specific ATP synthase [Shewanella sp. MR-7] gi|113884312|gb|ABI38364.1| flagellar protein export ATPase FliI [Shewanella sp. MR-4] gi|113888300|gb|ABI42351.1| flagellar protein export ATPase FliI [Shewanella sp. MR-7] Length = 445 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 224/367 (61%), Gaps = 3/367 (0%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117 + +V+ + +++Y+ P+ + G V G + +S GRV++ G P+DG Sbjct: 61 IAEVVGFDDELLYLMPIEELRGVLPGARVVPLGEQAGLSVGLSLLGRVLDGNGVPLDGLG 120 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 +L + + + P ++R+ + + G+R I+ + GQR+G+FAGSG+GKS L Sbjct: 121 ALSTEQQAPRHSNAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M R D +++ LVGERGREV+EFIE+ LG+ + +SVVV A +D SP++R A Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRACE 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LPRL+ER Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLA+ G YP +D AS Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+A S + + + + +++ +D+ IG Y G D +D A+ P + F Sbjct: 360 ISRVAPMVISNEHLEAMRRVKQTYSLYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAF 419 Query: 417 LKQSPSD 423 L+Q+ D Sbjct: 420 LRQTMRD 426 >gi|29839803|ref|NP_828909.1| type III secretion system ATPase [Chlamydophila caviae GPIC] gi|29834150|gb|AAP04787.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila caviae GPIC] Length = 442 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 156/386 (40%), Positives = 232/386 (60%), Gaps = 16/386 (4%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ P+G +S V G I GRV+N LG+PID + Sbjct: 61 EVVGFTQSFAFLSPLGELSGVSPSSEVIPTGLPLYIRAGNGLLGRVLNGLGEPIDTEL-- 118 Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 KG L + + P ++R+++ TG+R ID + GQRIG+FAG+G+GK Sbjct: 119 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 177 Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232 S+LL M AR ++ D +I+L+GERGREVREFIE LG+ +K+SV+VV+TSD+S LR Sbjct: 178 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 237 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LPR Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARAGYTPSVFSTLPR 297 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G S +KG ITA +VLV GD+ N+P+AD V+SILDGHIVL+ +LA+ YP +D Sbjct: 298 LLERSGAS--DKGTITAFYTVLVAGDDMNEPVADEVKSILDGHIVLSNALAQAYHYPAID 355 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SRL ++++++ ++ +++ + IG YR G D +D A+ + Sbjct: 356 VLASISRLLTAIVPEEQRRIIGKAREVLAKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 415 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438 + FLKQ D+ + ++E ++L+ Sbjct: 416 LNRFLKQ---DIHEKTNYEEAAQQLR 438 >gi|117919793|ref|YP_868985.1| flagellum-specific ATP synthase [Shewanella sp. ANA-3] gi|117612125|gb|ABK47579.1| flagellar protein export ATPase FliI [Shewanella sp. ANA-3] Length = 445 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 224/367 (61%), Gaps = 3/367 (0%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117 + +V+ + +++Y+ P+ + G V G + +S GRV++ G P+DG Sbjct: 61 IAEVVGFDDELLYLMPIEELRGVLPGARVVPLGEQAGLSVGLSLLGRVLDGNGVPLDGLG 120 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 +L + + + P ++R+ + + G+R I+ + GQR+G+FAGSG+GKS L Sbjct: 121 ALSTEQQAPRHSNAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M R D +++ LVGERGREV+EFIE+ LG+ + +SVVV A +D SP++R A Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRACE 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LPRL+ER Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLA+ G YP +D AS Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+A S + + + + +++ +D+ IG Y G D +D A+ P + F Sbjct: 360 ISRVAPMVISNEHLEAMRRVKQTYSLYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAF 419 Query: 417 LKQSPSD 423 L+Q+ D Sbjct: 420 LRQTMRD 426 >gi|58582227|ref|YP_201243.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624120|ref|YP_451492.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188576787|ref|YP_001913716.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576979|ref|YP_001913908.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58426821|gb|AAW75858.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368060|dbj|BAE69218.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521239|gb|ACD59184.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521431|gb|ACD59376.1| flagellum-specific ATP synthase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 458 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 146/342 (42%), Positives = 210/342 (61%), Gaps = 15/342 (4%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + G+R I+ P+ G Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD W + + L L+ + RD+ IG Y+ Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 G D D+A+ + P I +FL Q D+ V + LQ Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ---DVHKASVLSDSLSALQ 451 >gi|171057706|ref|YP_001790055.1| flagellar protein export ATPase FliI [Leptothrix cholodnii SP-6] gi|170775151|gb|ACB33290.1| flagellar protein export ATPase FliI [Leptothrix cholodnii SP-6] Length = 466 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 143/319 (44%), Positives = 201/319 (63%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G+P+D L D+ + +++ P AM+R V TG+R I+ + G Sbjct: 128 GRVVDANGEPMDRLGPLQ--DVHPQPLARRPINAMDRDPVRTPLDTGVRSINALLTVGRG 185 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVV 220 QR+G+FAG+G+GKS LL M AR D +++ L+GERGREV+EFIED LG+ + +SVVV Sbjct: 186 QRLGLFAGTGVGKSVLLGMMARYTEADVIVVGLIGERGREVKEFIEDILGEEGRARSVVV 245 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAEYF +G +VLL++DS+TRFA + REIA GE P + Sbjct: 246 AAPADSPPLTRMQGATYATAIAEYFRDQGRHVLLLMDSLTRFAMAQREIALAIGEPPATK 305 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP S F++LP+L+ER G +K +G+ITA +VL +GD+ DPIAD+ R ILDGHIVL+R Sbjct: 306 GYPPSCFAKLPQLVERSGNGQKGQGSITAFYTVLSEGDDQQDPIADAARGILDGHIVLSR 365 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D S+SR+ + + + + L+ R + RD+ +G Y PG D Sbjct: 366 ELAESGHYPAIDIEKSISRVMTSVAAREHIEAARRMRQLLSRVNKARDLIQLGAYAPGHD 425 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD AV P I L+Q Sbjct: 426 AELDAAVRAQPAIVALLQQ 444 >gi|212634370|ref|YP_002310895.1| flagellum-specific ATP synthase [Shewanella piezotolerans WP3] gi|212555854|gb|ACJ28308.1| ATPase FliI/YscN [Shewanella piezotolerans WP3] Length = 446 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 163/427 (38%), Positives = 250/427 (58%), Gaps = 22/427 (5%) Query: 9 AQLAEDYSK-NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 ++LA+ +SK N V + V T+ +G + + + + +VI + Sbjct: 10 SKLAQHHSKVNPFVAEASGQLVRVVGLTLEATGCRASVGSLCSIETMSGELVAEVIGFDD 69 Query: 68 DIVYICPVGIGEEIS---LGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGD 123 +++Y+ P+ EE+S G V G+ +S GRV++ G PIDG LG Sbjct: 70 ELLYLMPI---EELSGVLPGAKVTPLGQQSGLSVGLALLGRVLDGSGLPIDG---LG--- 120 Query: 124 LSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 +++ K P PA+N R+ + + G+R I+ + GQR+G+FAGSG+GKS L Sbjct: 121 -NLQTDQKAPTHAPAINPLARRAISEPLDVGVRAINSMLTVGKGQRMGLFAGSGVGKSVL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 L M R D +++ LVGERGREV+EFIE+ LG + +SVVV A +D SP++R A Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRLRACE 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T+ IAEYF G +VLL++DS+TR+A + REIA GE P +GYP SVF++LP+L+ER Sbjct: 240 TSTRIAEYFRDMGYSVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G ++G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLA+ G YP +D AS Sbjct: 300 AGNGGGKQGSITAFYTVLTEGDDLQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+A + + + + + + +++ +D+ IG Y G D +D A+ P + F Sbjct: 360 ISRVAPMVITTEHLEAMRRVKQVYSLYQQNKDLISIGAYTQGSDPRIDNAIRLQPAMNAF 419 Query: 417 LKQSPSD 423 L+Q+ D Sbjct: 420 LRQTMKD 426 >gi|148546740|ref|YP_001266842.1| flagellum-specific ATP synthase [Pseudomonas putida F1] gi|148510798|gb|ABQ77658.1| flagellar protein export ATPase FliI [Pseudomonas putida F1] Length = 451 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/355 (42%), Positives = 213/355 (60%), Gaps = 7/355 (1%) Query: 70 VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 V++ PVG I+ G V GR + S GRV++ G+ +DG + K + + Sbjct: 77 VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + V +NR + K GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 134 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 + +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TRFA + REIA GE P RGYP SVF++LP+L+ER G E G Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIADS R +LDGH VL+R LAEEG YP +D AS+SR+ + Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 AD + L R ++RD+ +G Y G D D A+ + +FL+Q Sbjct: 374 DADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQG 428 >gi|2935537|gb|AAC38612.1| BscN [Bordetella bronchiseptica] Length = 444 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 156/410 (38%), Positives = 235/410 (57%), Gaps = 16/410 (3%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQY--VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75 L ++G + + ++ V + + VCL + + G++ + G+V+ D + P+ Sbjct: 20 TLRIKGRVVQVVGTIIKAVVPMVKIGEVCL---LRNPGEDFEMHGEVVGFVRDAALLTPI 76 Query: 76 GIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME----IMS 130 G IS V GR + P GRV++ LG+P+D +S G L + + Sbjct: 77 GDMYGISSATEVIPTGRTHMVPVGPGLLGRVLDGLGRPLDVAES---GPLHAHKFYPVFA 133 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 P + R+ + + G+RV+D GQR+G+FA +G GKSTLL M + D Sbjct: 134 DAPDPLTRRIIHAPLELGVRVLDGLLTCGEGQRLGIFAAAGGGKSTLLGMLVKGAAVDVT 193 Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +++L+GERGREVREF+E LG + +KSV+V ATSD+S + R A A IAEYF +G Sbjct: 194 VVALIGERGREVREFLEHELGPEGRRKSVIVCATSDKSSMERAKAAYVATAIAEYFRDQG 253 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VL +DS+TRFA + REI +G+ P RGYP SVF+ LP+L+ER G ++ G+ITA Sbjct: 254 QRVLFRMDSVTRFARAQREIGLAAGDPPTRRGYPPSVFATLPKLMERAGMNQT--GSITA 311 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLV+GD+ N+P+AD RSILDGHIVL+R L YP VD LAS SR+ + S Sbjct: 312 LYTVLVEGDDMNEPVADETRSILDGHIVLSRKLGAANHYPAVDVLASASRVMNAVVSPRH 371 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 K L + L+ ++++ + IG Y+ G D D+A+ ++ I FL+Q Sbjct: 372 KYLAGRMRELMAKYQDVELLVKIGEYKQGADASTDEAIQKIGQINAFLRQ 421 >gi|312881284|ref|ZP_07741082.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC BAA-2122] gi|309371176|gb|EFP98630.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC BAA-2122] Length = 439 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 159/365 (43%), Positives = 226/365 (61%), Gaps = 23/365 (6%) Query: 74 PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 PVG G + +GD + G+V++ LG+ ++G G+ + + P Sbjct: 91 PVGHGHRVMVGDELL--------------GKVVDGLGQSMEGVRWHGEWK---DNQGEAP 133 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 + R+ + + +TG+R ID + GQRIG+FA +G GKSTLL M A D V+++ Sbjct: 134 DPLKRKLITQVMRTGVRAIDSTLTIGIGQRIGIFAAAGGGKSTLLGMLAGHCDADVVVLA 193 Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252 LVGERGREVREFIE L +++ K V+VVATSD+ P+ R A +TA TIAEYF KG NV Sbjct: 194 LVGERGREVREFIEYCLPPSVREKMVLVVATSDKPPLERFKAAMTATTIAEYFRDKGQNV 253 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LL++DS+TRFA + REI +GE PVA G+P SVF +L LLER GP+ G+ITA+ + Sbjct: 254 LLMVDSLTRFARAGREIGLAAGEPPVANGFPPSVFVQLASLLERAGPASV--GSITAIYT 311 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 VLV+GDN N+P+AD VRSILDGH+VL+R LA G YP +D ASVSR+ D+ + K Sbjct: 312 VLVEGDNINEPVADEVRSILDGHVVLSRKLAGSGHYPAIDVNASVSRVMDQIVTGQHKAN 371 Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 + L HL+ ++E + + +G Y+ G D D+AV + I FL Q D + F++ Sbjct: 372 ANHLRHLLALYQEVQLLIRVGEYQVGQDSETDEAVDKYKQIERFLCQ---DTHEQTDFEQ 428 Query: 433 ITKKL 437 + ++L Sbjct: 429 VLEQL 433 >gi|22127336|ref|NP_670759.1| flagellum-specific ATP synthase [Yersinia pestis KIM 10] gi|45442788|ref|NP_994327.1| flagellum-specific ATP synthase [Yersinia pestis biovar Microtus str. 91001] gi|108809063|ref|YP_652979.1| flagellum-specific ATP synthase [Yersinia pestis Antiqua] gi|108810740|ref|YP_646507.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516] gi|150260257|ref|ZP_01916985.1| lateral flagellar assembly ATPase [Yersinia pestis CA88-4125] gi|165925142|ref|ZP_02220974.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165939070|ref|ZP_02227622.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis str. IP275] gi|166008909|ref|ZP_02229807.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166211962|ref|ZP_02237997.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|167398591|ref|ZP_02304115.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419081|ref|ZP_02310834.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425097|ref|ZP_02316850.1| flagellum-specific ATP synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167466349|ref|ZP_02331053.1| flagellum-specific ATP synthase [Yersinia pestis FV-1] gi|218927904|ref|YP_002345779.1| flagellum-specific ATP synthase [Yersinia pestis CO92] gi|229837400|ref|ZP_04457563.1| lateral flagellar assembly ATPase [Yersinia pestis Pestoides A] gi|229840613|ref|ZP_04460772.1| lateral flagellar assembly ATPase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842836|ref|ZP_04462988.1| lateral flagellar assembly ATPase [Yersinia pestis biovar Orientalis str. India 195] gi|229900937|ref|ZP_04516061.1| lateral flagellar assembly ATPase [Yersinia pestis Nepal516] gi|270487681|ref|ZP_06204755.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27] gi|294502781|ref|YP_003566843.1| flagellum-specific ATP synthase [Yersinia pestis Z176003] gi|21960418|gb|AAM87010.1|AE013949_4 flagellum-specific ATP synthase [Yersinia pestis KIM 10] gi|45437654|gb|AAS63204.1| putative flagellum-specific ATP synthase [Yersinia pestis biovar Microtus str. 91001] gi|108774388|gb|ABG16907.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516] gi|108780976|gb|ABG15034.1| putative flagellum-specific ATP synthase [Yersinia pestis Antiqua] gi|115346515|emb|CAL19391.1| putative flagellum-specific ATP synthase [Yersinia pestis CO92] gi|149289665|gb|EDM39742.1| lateral flagellar assembly ATPase [Yersinia pestis CA88-4125] gi|165913026|gb|EDR31651.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis str. IP275] gi|165923342|gb|EDR40493.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis str. F1991016] gi|165992248|gb|EDR44549.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua str. E1979001] gi|166206708|gb|EDR51188.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua str. B42003004] gi|166963075|gb|EDR59096.1| flagellum-specific ATP synthase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051095|gb|EDR62503.1| flagellum-specific ATP synthase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055860|gb|EDR65641.1| flagellum-specific ATP synthase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229682276|gb|EEO78368.1| lateral flagellar assembly ATPase [Yersinia pestis Nepal516] gi|229690103|gb|EEO82160.1| lateral flagellar assembly ATPase [Yersinia pestis biovar Orientalis str. India 195] gi|229696979|gb|EEO87026.1| lateral flagellar assembly ATPase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229705523|gb|EEO91533.1| lateral flagellar assembly ATPase [Yersinia pestis Pestoides A] gi|262360813|gb|ACY57534.1| flagellum-specific ATP synthase [Yersinia pestis D106004] gi|262364758|gb|ACY61315.1| flagellum-specific ATP synthase [Yersinia pestis D182038] gi|270336185|gb|EFA46962.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27] gi|294353240|gb|ADE63581.1| flagellum-specific ATP synthase [Yersinia pestis Z176003] gi|320016719|gb|ADW00291.1| lateral flagellar assembly ATPase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 446 Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/363 (41%), Positives = 208/363 (57%), Gaps = 8/363 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117 QV+ + DI Y+ P + G VF G I S W GRVIN LG+P+DG Sbjct: 60 QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPLDGKG 117 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 LG + + ++ P + R+ V+ G+ I+ + GQR+G+ AGSG+GKS L Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236 L M R D V++ L+GERGREV+EFIE L + KSVVV A +DESP++R A Sbjct: 177 LGMITRYTQADVVVVGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATE 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 IA Y+ KG +VLL++DS+TR+A + REIA + GE P +GYP S FS +PRL E Sbjct: 237 LCHAIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G +TA+ +VL +GD+ DPI D R++LDGHIVL+R LAE G YP +D S Sbjct: 297 AGNSSG-NGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQS 355 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + + K S L + + + +GGY G D + D+AVH P I F Sbjct: 356 ISRCMSQVIGSQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQF 415 Query: 417 LKQ 419 L+Q Sbjct: 416 LRQ 418 >gi|161378124|ref|NP_746480.2| flagellum-specific ATP synthase [Pseudomonas putida KT2440] Length = 451 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/355 (42%), Positives = 213/355 (60%), Gaps = 7/355 (1%) Query: 70 VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 V++ PVG I+ G V GR + S GRV++ G+ +DG + K + + Sbjct: 77 VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + V +NR + K GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 134 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 + +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TRFA + REIA GE P RGYP SVF++LP+L+ER G E G Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIADS R +LDGH VL+R LAEEG YP +D AS+SR+ + Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 AD + L R ++RD+ +G Y G D D A+ + +FL+Q Sbjct: 374 DADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQG 428 >gi|18140083|gb|AAL60251.1|AF459637_1 putative EscN [Escherichia coli] Length = 446 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/372 (40%), Positives = 218/372 (58%), Gaps = 3/372 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P++ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHVSGMYCGQWLSYQGDEFKIRVGDALLGRLVDGIGRPME 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + + ++ P + RQ ++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 SNIAAPYLPFERSLYAEPPDPLLRQVIDPPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPGLERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 304 ERSGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ +++ + + LI ++ + IG Y G D DKA+ +I Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQ 421 Query: 415 DFLKQSPSDLSS 426 +F++QS D+SS Sbjct: 422 NFIQQSTKDISS 433 >gi|331671790|ref|ZP_08372586.1| flagellar protein export ATPase FliI [Escherichia coli TA280] gi|331070779|gb|EGI42138.1| flagellar protein export ATPase FliI [Escherichia coli TA280] Length = 445 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/373 (40%), Positives = 219/373 (58%), Gaps = 4/373 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W GRV+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGRVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 DL + V + R+ V++ G++ I+ + GQR+G+ AGSG+GKS LL Sbjct: 120 NGNDLLPPLPPLVN-PLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLLG 178 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 179 MITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKATELC 238 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E G Sbjct: 239 HSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESAG 298 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D S+S Sbjct: 299 NSES-SGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSIS 357 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R ++ S + ++ +L + E + + +GGY G D +DKAV P I FL+ Sbjct: 358 RCMNQVTSLEHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIERFLR 417 Query: 419 QSPSDLSSEDVFQ 431 Q + +S ++ Q Sbjct: 418 QEMREPASLELVQ 430 >gi|166712029|ref|ZP_02243236.1| flagellar protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 458 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 147/342 (42%), Positives = 210/342 (61%), Gaps = 15/342 (4%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + G+R I+ P+ G Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD W +K L L+ + RD+ IG Y+ Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTWRLRIRK----LKRLLSAYTANRDLIAIGAYQ 412 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 G D D+A+ + P I +FL Q D+ V + LQ Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ---DVHKASVLSDSLSALQ 451 >gi|239909143|ref|YP_002955885.1| flagellum-specific ATP synthase [Desulfovibrio magneticus RS-1] gi|239799010|dbj|BAH77999.1| flagellum-specific ATP synthase [Desulfovibrio magneticus RS-1] Length = 441 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 151/335 (45%), Positives = 211/335 (62%), Gaps = 5/335 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 + GRVI+A G PID D + + I + P M+R R+ G+R I+ L Sbjct: 103 YLGRVIDAFGNPIDNGDPVVPRRFN-PIFAPAPSPMDRPRICDPMDVGVRAINGCLTLGK 161 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+ AGSG+GKSTL+ M AR+ D +I LVGERGRE+REFIE LG + + +SVV Sbjct: 162 GQRVGIMAGSGVGKSTLMGMIARNTVADVNVIGLVGERGRELREFIEKDLGPEGMARSVV 221 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD+SP++R A A +AE+F +G++V+L++DS+TRFA + RE+ +GE P Sbjct: 222 VVATSDQSPLIRMRAAYAATAMAEFFRDEGNDVILMMDSVTRFAMAGREVGLAAGEPPTT 281 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGY SVF++LP+LLER G G+IT + +VLVDGD+ N+PIADSVRSILDGHIVL Sbjct: 282 RGYTPSVFAQLPKLLERAG--RNGLGSITGIYTVLVDGDDFNEPIADSVRSILDGHIVLT 339 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA++G +P +D L S+SRL D L L+ + D+ IG Y G Sbjct: 340 RDLADQGHFPAIDVLRSISRLRSDVTPKDALAASRELIRLLATYRRVEDMVNIGAYARGA 399 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 + +D+A+ + I FL+Q ++ S E+ FQ + Sbjct: 400 NPEIDRAIDMIGPINTFLRQDVAERQSLEECFQAV 434 >gi|167034922|ref|YP_001670153.1| flagellum-specific ATP synthase [Pseudomonas putida GB-1] gi|166861410|gb|ABY99817.1| flagellar protein export ATPase FliI [Pseudomonas putida GB-1] Length = 451 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 151/355 (42%), Positives = 213/355 (60%), Gaps = 7/355 (1%) Query: 70 VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 V++ PVG I+ G V GR + S GRV++ G+ +DG + K + + Sbjct: 77 VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + V +NR + K GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 134 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 + +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TRFA + REIA GE P RGYP SVF++LP+L+ER G E G Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIADS R +LDGH VL+R LAEEG YP +D AS+SR+ + Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 AD + L R ++RD+ +G Y G D D A+ + +FL+Q Sbjct: 374 DADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQG 428 >gi|153948482|ref|YP_001399626.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP 31758] gi|152959977|gb|ABS47438.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP 31758] Length = 446 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 152/363 (41%), Positives = 208/363 (57%), Gaps = 8/363 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117 QV+ + DI Y+ P + G VF G I S W GRVIN LG+PIDG Sbjct: 60 QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPIDGKG 117 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 LG + + ++ P + R+ V+ G+ I+ + GQR+G+ AGSG+GKS L Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236 L M R D V++ L+GERGREV+EFIE L + KSVVV A +DESP++R A Sbjct: 177 LGMITRYTQADVVVVGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATE 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +IA Y+ KG +VLL++DS+TR+A + REIA + GE P +GYP S FS +PRL E Sbjct: 237 LCHSIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G +TA+ +VL +GD+ DPI D R++LDGHIVL+R LAE G YP +D S Sbjct: 297 AGNSSG-NGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQS 355 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + K S L + + + +GGY G D + D+AVH P I F Sbjct: 356 ISRCMSQVIGRQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQF 415 Query: 417 LKQ 419 L+Q Sbjct: 416 LRQ 418 >gi|289629030|ref|ZP_06461984.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aesculi str. NCPPB3681] Length = 347 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 141/325 (43%), Positives = 200/325 (61%), Gaps = 2/325 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G+P+DG + D + P + R + + GIR I+ + GQ Sbjct: 6 GRVLDGAGRPLDGRSPIKAEDWVPMDGPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQ 64 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FAG+G+GKS LL M R D +++ L+GERGREV+EFIE LG+ LK+SVVV Sbjct: 65 RLGLFAGTGVGKSVLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVA 124 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 + +D++P++R A + IAEYF KG NVLL++DS+TRFA + REIA GE P +G Sbjct: 125 SPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKG 184 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LP+L+ER G +E G+ITA +VL +GD+ DPIADS R +LDGHI+L+R Sbjct: 185 YPPSVFARLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHILLSRR 244 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAEEG YP +D AS+SR+ S + L R+++TRD+ +G Y G D Sbjct: 245 LAEEGHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDR 304 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426 D A+ P++ + +Q D S Sbjct: 305 ETDMAIALHPVLVRYQRQGLRDNES 329 >gi|253702505|ref|YP_003023694.1| ATPase, FliI/YscN family [Geobacter sp. M21] gi|251777355|gb|ACT19936.1| ATPase, FliI/YscN family [Geobacter sp. M21] Length = 434 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 155/391 (39%), Positives = 225/391 (57%), Gaps = 8/391 (2%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINA 108 VH ++ +V+ + + P+G + LG ++ + + GRVI+ Sbjct: 46 VHSEGHAPIPAEVVGFRENKTLLMPLGELRGVGLGSVISVRREKAALGVGPALLGRVIDG 105 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG+PID + D V P M R+ + K GIR I+ GQR+G+ A Sbjct: 106 LGQPIDDKGPIEVADEYPIYALPVNP-MKRRPIRKPLNLGIRAINGLLTCGEGQRVGIMA 164 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDES 227 GSG+GKSTLL M AR D +I+L+GERGRE+REFIE D + L+KSVVVVATSD+ Sbjct: 165 GSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQKEGLRKSVVVVATSDQP 224 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 P++R A TIAEYF ++G VLL++DS TRFA ++RE+ GE P +GY SVF Sbjct: 225 PLVRMRGAYIATTIAEYFQAQGKKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVF 284 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + LPRLLER G + G+IT + +VLV+GD+ N+PI+D++RSILDGHI+L R LA Sbjct: 285 AALPRLLERTG--NFQGGSITGLYTVLVEGDDFNEPISDAMRSILDGHIILTRELAARNI 342 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YPP+D + S SR+ + + + L L+ + + D+ IG Y+ G + +D AV Sbjct: 343 YPPIDLMNSASRVMSDVATKEHRALAGRFKELLATYRQAEDMINIGAYKSGSNPKIDYAV 402 Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 ++ + +LKQ D+ E F+E L+ Sbjct: 403 AKMEQMIGYLKQ---DVGDEVNFEESIAALE 430 >gi|77165819|ref|YP_344344.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN [Nitrosococcus oceani ATCC 19707] gi|254434391|ref|ZP_05047899.1| flagellar protein export ATPase FliI [Nitrosococcus oceani AFC27] gi|76884133|gb|ABA58814.1| Flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN [Nitrosococcus oceani ATCC 19707] gi|207090724|gb|EDZ67995.1| flagellar protein export ATPase FliI [Nitrosococcus oceani AFC27] Length = 480 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 145/352 (41%), Positives = 211/352 (59%), Gaps = 9/352 (2%) Query: 89 HWGRFRISPSACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKT 147 H GR + GRV++ G+P+D L +S+E P + RQ + + Sbjct: 105 HGGRMAVG--EALLGRVLDGGGRPLDDLGPLRATHRVSLEGQPINP--LARQPIREPMDV 160 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G+ I+ + GQR+G+FAGSG+GKS LL M R D +++ L+GERGREV+EFIE Sbjct: 161 GVAAINALLTIGRGQRMGLFAGSGVGKSVLLGMMTRYAKADVIVVGLIGERGREVQEFIE 220 Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + LG + L +SVVV +D SP++R + A +IAEYF +G VLL++DS+TRF H+ Sbjct: 221 NILGKEGLARSVVVATPADHSPLMRIHGAMLATSIAEYFRDQGKQVLLLMDSLTRFGHAQ 280 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 RE+A GE P RGYP SVF+++P+LLER G G+ITA +VL +GD+ NDP+AD Sbjct: 281 RELALAIGEPPATRGYPPSVFAKIPQLLERAGNGRSGSGSITAFYTVLTEGDDPNDPVAD 340 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 S R+ILDGHIVL+R LAE G YP +D AS+SR+ + + ++ + + + Sbjct: 341 SARAILDGHIVLSRRLAEAGHYPAIDIEASISRVMSQITVPEHQQAAQQFKQIYSLYSQN 400 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +D+ +G Y G D LD+AV + P FL+Q D+S +E ++LQ Sbjct: 401 QDLISVGAYSRGSDSRLDEAVDRQPQFRSFLQQ---DMSQSFSVKESLERLQ 449 >gi|313497799|gb|ADR59165.1| FliI [Pseudomonas putida BIRD-1] Length = 451 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 151/355 (42%), Positives = 213/355 (60%), Gaps = 7/355 (1%) Query: 70 VYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 V++ PVG I+ G V GR + S GRV++ G+ +DG + K + + Sbjct: 77 VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + V +NR + K GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 134 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 + +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TRFA + REIA GE P RGYP SVF++LP+L+ER G E G Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIADS R +LDGH VL+R LAEEG YP +D AS+SR+ + Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 AD + L R ++RD+ +G Y G D D A+ + +FL+Q Sbjct: 374 DADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQG 428 >gi|167840292|ref|ZP_02466976.1| type III secretion system ATPase [Burkholderia thailandensis MSMB43] Length = 442 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 156/370 (42%), Positives = 220/370 (59%), Gaps = 5/370 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG L Sbjct: 65 EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGHGILGRVIDSFGEPIDGRGEL 124 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 125 DY-DALRPVIAPPPNPMSRRMVDAPLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A A Sbjct: 184 MFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERTG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+ITA+ +VL + D+ +DPIA+ VR ILDGHI+L+R +A +YP +D L S+S Sbjct: 304 MG--EHGSITALYTVLAEDDSGSDPIAEEVRGILDGHIILSREIAARNQYPAIDVLGSLS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + L L+ + E + +G Y+ G D D+AV ++ I FL Sbjct: 362 RIMPQVATREHVGAAGRLRQLLAKHREIETLLQLGEYQAGSDPAADEAVAKIDRIRTFLN 421 Query: 419 QSPSDLSSED 428 Q + S D Sbjct: 422 QRTDEYSPPD 431 >gi|328958281|ref|YP_004375667.1| flagellum-specific ATP synthase [Carnobacterium sp. 17-4] gi|328674605|gb|AEB30651.1| flagellum-specific ATP synthase [Carnobacterium sp. 17-4] Length = 442 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 168/426 (39%), Positives = 243/426 (57%), Gaps = 13/426 (3%) Query: 17 KNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN--LGQVIRINLDIVYICP 74 K+ ++ G +S +T + V L +V G+ K+S L +V+ ++V + P Sbjct: 16 KDYYLKMGKVSQVTGLIIKVEGLDAFV--GEVCEIHIKSSGRIALSEVVGFVDEMVLLMP 73 Query: 75 VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 + E I G LV G+ ++ S G ++ LG+P+D SL + ++ P Sbjct: 74 LDELEGIGPGCLVKPTGKTLKVEISEKLLGNTLDGLGRPMD--TSLEVDGVFYDVNRSSP 131 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 R++++ TGI+ ID + GQR+G+FAGSG+GKSTLL M AR D ++I Sbjct: 132 NPFKRKKIKDVMPTGIKAIDGTLTVGEGQRVGIFAGSGVGKSTLLGMMARYIEADVIVIG 191 Query: 194 LVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252 L+GERGREV EFIE LG+ +KSVVV ATSD P++R A TIAEYF +G V Sbjct: 192 LIGERGREVLEFIEKDLGEEGYRKSVVVCATSDMPPLVRLKGASVATTIAEYFRDQGKKV 251 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 +L++DS+TR A + REI +GE P +GY SVF+ LP+LLER G SE G+ITA + Sbjct: 252 VLMMDSVTRVAMAQREIGLATGEPPTTKGYTPSVFTTLPKLLERSGMSEN--GSITAFYT 309 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 VLV+GD+ N+PIADSVR ILDGHIVL+R +A E YP +D S+SRL + Sbjct: 310 VLVEGDDMNEPIADSVRGILDGHIVLSRKIASENHYPAIDIQNSISRLMKDITTDKHSTT 369 Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 L + + +++D+ +G YR G + +D+AV I DFLKQ + F E Sbjct: 370 AGKLKENMSVYSDSKDLIDVGAYRKGSNPSVDRAVQLNTPIKDFLKQR---VDERYAFDE 426 Query: 433 ITKKLQ 438 + +L+ Sbjct: 427 VVDQLK 432 >gi|204927532|ref|ZP_03218733.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322874|gb|EDZ08070.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 433 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPEVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|56413614|ref|YP_150689.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362538|ref|YP_002142175.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127871|gb|AAV77377.1| putative type III secretion ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094015|emb|CAR59511.1| putative type III secretion ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 433 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPEVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDAYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|16764765|ref|NP_460380.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161614168|ref|YP_001588133.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167995049|ref|ZP_02576139.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|194442812|ref|YP_002040667.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|3024659|sp|P74857|SSAN_SALTY RecName: Full=Probable secretion system apparatus ATP synthase SsaN gi|1669750|emb|CAA70537.1| secretion system apparatus [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419936|gb|AAL20339.1| secretion system apparatus protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|161363532|gb|ABX67300.1| hypothetical protein SPAB_01910 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401475|gb|ACF61697.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|205327193|gb|EDZ13957.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|261246621|emb|CBG24431.1| putative type III secretion ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993304|gb|ACY88189.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157950|emb|CBW17445.1| type III secretion ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912400|dbj|BAJ36374.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321224039|gb|EFX49102.1| Type III secretion cytoplasmic ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323129687|gb|ADX17117.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332988302|gb|AEF07285.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 433 Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|260438805|ref|ZP_05792621.1| flagellar protein export ATPase FliI [Butyrivibrio crossotus DSM 2876] gi|292808794|gb|EFF67999.1| flagellar protein export ATPase FliI [Butyrivibrio crossotus DSM 2876] Length = 434 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 146/321 (45%), Positives = 210/321 (65%), Gaps = 5/321 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G+ ++ LG P DG + +E P M+R + + G++ +D + Sbjct: 99 LLGKTVDGLGVPTDGSELQSFERYPVE--QTAPDPMDRVIINEILPLGVKAVDGLLTIGK 156 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQRIG+FAGSG+GKSTLL MFAR+ D +I+L+GERGREVREFIE LG+ +K+SVV Sbjct: 157 GQRIGIFAGSGVGKSTLLGMFARNTKADINVIALIGERGREVREFIERDLGEEGMKRSVV 216 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD+ ++R A TA IAEYF +G +VLL++DS+TRF+ + REI SGE PV Sbjct: 217 VVATSDKPALIRNKAAKTATAIAEYFRDQGKDVLLMMDSLTRFSMAQREIGLASGEPPVT 276 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP S++SE+P+LLER G S +KG+IT + +VLVDGD+ N+PI D+ RSILDGHI+L+ Sbjct: 277 RGYPPSMYSEMPKLLERAGNS--DKGSITGLYTVLVDGDDFNEPITDTARSILDGHIMLS 334 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA + YP +D L S+SR + +K+L L +++ + E D+ IG Y+ G Sbjct: 335 RKLAHKNHYPAIDVLQSISRCMSQIVDKHQKELAGRLKNVMATYTEAEDLINIGAYKSGS 394 Query: 400 DLILDKAVHQVPIIYDFLKQS 420 + +D A+ ++ + +FL Q+ Sbjct: 395 NKNIDYAISKIDKVNEFLMQA 415 >gi|2105151|gb|AAB57902.1| FliI [Treponema denticola] Length = 473 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 160/383 (41%), Positives = 226/383 (59%), Gaps = 6/383 (1%) Query: 55 NSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113 N D L +V+ +N IV + + + +G L+ +F + G ++AL K Sbjct: 52 NPDGLKAEVVGLNGTIVQLMSYTDVQGVKIGTLLLQAEKFYRPGWKYFTGPCVDALCKSA 111 Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 DG +++ P AM R+ + + TGIR ID + GQR+G+FAG+GIG Sbjct: 112 DGKPEPYSAK-RYPVVASPPDAMTRKPIRQRIVTGIRAIDSLLAVGRGQRLGIFAGTGIG 170 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232 KSTLL M AR+ D +I+L+GERGREV +FIE LG + LK SV+V ATSD + R Sbjct: 171 KSTLLGMIARNTNADVNVIALIGERGREVLDFIEHDLGPEGLKHSVIVSATSDRKCLARI 230 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 TA IAEYF +G +V+L+ DS+TRFA + REI GE P RGY SVFS LP+ Sbjct: 231 RGAYTATAIAEYFRDQGKDVMLLFDSVTRFAMAQREIGLAIGEPPATRGYTPSVFSSLPK 290 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G SEK G+IT +VLV+GD+ N+PI+D+VR ILDGHIVL+R+LAE G+YP V+ Sbjct: 291 LLERSGTSEK--GSITGFYTVLVEGDDMNEPISDAVRGILDGHIVLDRNLAERGQYPAVN 348 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 L S+S + ++ K + L+ + E+ D+ +G Y+ G +D A+ P Sbjct: 349 VLKSISSIIQQSIGTKHKDASKRMRTLLKDYTESEDMINLGAYQKGSSAAIDDAIDHYPR 408 Query: 413 IYDFLKQSPSDLSS-EDVFQEIT 434 IYDFL Q D + +D Q+++ Sbjct: 409 IYDFLTQEVDDPAKLKDTLQKLS 431 >gi|163802005|ref|ZP_02195901.1| type III secretion system ATPase [Vibrio sp. AND4] gi|159174146|gb|EDP58954.1| type III secretion system ATPase [Vibrio sp. AND4] Length = 440 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 148/357 (41%), Positives = 213/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G++++ LG+P DG + + + Sbjct: 88 VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGTQN-SEPTAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG+ + KSV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + + ++ ++EE + IG Y+ G D D A+ Q I +FL+Q PS+L Sbjct: 371 ASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIREFLRQGTHEPSEL 427 >gi|332284039|ref|YP_004415950.1| flagellum-specific ATP synthase FliI [Pusillimonas sp. T7-7] gi|330427992|gb|AEC19326.1| flagellum-specific ATP synthase FliI [Pusillimonas sp. T7-7] Length = 496 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 206/322 (63%), Gaps = 6/322 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G+P+DG +L + + P + R ++ G+R I+ + GQ Sbjct: 139 GRVLDGAGQPLDGLGALDNVRPAPLFAQTINP-LARAPIDTVLDVGVRAINGLLTVGRGQ 197 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D ++++L+GERGREV+EFIE LG + L++SVVV Sbjct: 198 RMGLFAGSGVGKSVLLGMMARYTRADVIVVALIGERGREVKEFIEHNLGAEGLQRSVVVA 257 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR + A +AE+F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 258 APADVSPLLRLQGAVYATRLAEHFRDQGKHVLLIMDSLTRYAMAQREIALAIGEPPATKG 317 Query: 282 YPTSVFSELPRLLERIGP----SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 YP SVF++LP L+ER G + + G+ITA +VL +GD+ DPIADS R+ILDGH+V Sbjct: 318 YPPSVFAKLPALVERAGNGAPVAGRPAGSITAFYTVLTEGDDQQDPIADSARAILDGHVV 377 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+RSLAE G YP +D AS+SR+ D+ KLV ++ R++ D+ +G Y P Sbjct: 378 LSRSLAESGHYPAIDIEASISRVMSAIVPGDQFKLVHRFKQMLSRYQRNHDLIAVGAYTP 437 Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419 G D +D+A+ + P + +L+Q Sbjct: 438 GNDPQIDEAIEKHPWLEAYLQQ 459 >gi|24986088|gb|AAN69944.1|AE016633_2 flagellum-specific ATP synthase FliI [Pseudomonas putida KT2440] Length = 457 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 151/355 (42%), Positives = 213/355 (60%), Gaps = 7/355 (1%) Query: 70 VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 V++ PVG I+ G V GR + S GRV++ G+ +DG + K + + Sbjct: 83 VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 139 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + V +NR + K GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 140 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 199 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 + +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 200 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 259 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TRFA + REIA GE P RGYP SVF++LP+L+ER G E G Sbjct: 260 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGG 319 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIADS R +LDGH VL+R LAEEG YP +D AS+SR+ + Sbjct: 320 SITAFYTVLSEGDDQQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 379 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 AD + L R ++RD+ +G Y G D D A+ + +FL+Q Sbjct: 380 DADHLRQAQKFKQLWSRLSQSRDLISVGAYVAGGDPETDLAIALQSKLVEFLRQG 434 >gi|306813317|ref|ZP_07447510.1| FliI/YscN family ATPase [Escherichia coli NC101] gi|305854080|gb|EFM54519.1| FliI/YscN family ATPase [Escherichia coli NC101] Length = 446 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 150/376 (39%), Positives = 221/376 (58%), Gaps = 10/376 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSL 119 Q + N DI Y+ P + G VF + I W G V+N LG+P+DG L Sbjct: 60 QAVGFNRDITYLMPFKQPVGLMAGARVFPEEKAHDILIGESWLGCVVNGLGEPLDGKGRL 119 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 DL + +PP++N R+ V++ G++ I+ + GQR+G+ AGSG+GKS Sbjct: 120 NGNDL----LPPLPPSVNPLTRRSVDEPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAP 235 LL M R D V++ L+GERGREV+EFI+ LG D L KS+VVVA +DESP++R A Sbjct: 176 LLGMITRQTKADIVVVGLIGERGREVKEFIDHSLGADGLAKSIVVVAPADESPLMRLKAT 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GY S F +P+L+E Sbjct: 236 ELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYLPSAFGMIPKLVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D Sbjct: 296 SAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQ 354 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR ++ S + ++ ++ + E + + +GGY G D +DKAV P I Sbjct: 355 SISRCMNQVTSPEHQQSARAMKQNYAAYMEIKPLIPLGGYVAGADASVDKAVKMFPAIER 414 Query: 416 FLKQSPSDLSSEDVFQ 431 FL+Q + +S ++ Q Sbjct: 415 FLRQEMHEPASLELVQ 430 >gi|46398256|gb|AAS91810.1| AscN [Aeromonas hydrophila] Length = 440 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 158/408 (38%), Positives = 232/408 (56%), Gaps = 20/408 (4%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79 VV G I + + LS + F HQ + LG++ I+ + + P G Sbjct: 39 VVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQALLTP-LGEMFGISSN-TEVSPTGTMH 96 Query: 80 EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 ++ +G+ + G+V++ LG P G L + + PP M+R+ Sbjct: 97 QVGVGEHLL--------------GQVLDGLGNPFGGGH-LPEPAAWYPVYRDAPPPMSRK 141 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ + GIR ID GQR+G+FA +G GKSTLL+ RS D +++L+GERG Sbjct: 142 RITQPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG 201 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVREFIE LG+ LKK+V+VVATSD + R A A +IAEYF +G VLL++DS Sbjct: 202 REVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDS 261 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI +GE P RGYP SVF+ LPRL+ER G S +KG+ITA+ +VLV+GD Sbjct: 262 VTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGD 319 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ + + + Sbjct: 320 DMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQAGRIRS 379 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + ++EE + IG Y+ G D + D+A+ ++ I +L+Q + SS Sbjct: 380 WLAKYEEVELLLQIGEYQKGQDKVADEAIARIEAIRQWLRQGTHEPSS 427 >gi|332163582|ref|YP_004424924.1| type III secretion system ATPase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667812|gb|ADZ44455.1| type III secretion system ATPase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 410 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 202/324 (62%), Gaps = 4/324 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V++ LG+P DG L + + P M+R+ + GIRVID GQ Sbjct: 76 GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 134 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221 R+G+FA +G GKSTLL+ RS D +++L+GERGREVREFIE LG+ L+K+V+VV Sbjct: 135 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLRKAVLVV 194 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD + R A A +IAEYF +G VLL++DS+TRFA + REI +GE P RG Sbjct: 195 ATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 254 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LPRL+ER G S K G+ITA+ +VLV+GD+ +P+AD RSILDGHI+L+R Sbjct: 255 YPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 312 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA YP +D L S SR+ ++ S + K L L+ ++EE + IG Y+ G D Sbjct: 313 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQDK 372 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425 D+A+ ++ I +L Q +LS Sbjct: 373 EADQAIERIGAIRGWLCQGTHELS 396 >gi|134300244|ref|YP_001113740.1| flagellar protein export ATPase FliI [Desulfotomaculum reducens MI-1] gi|134052944|gb|ABO50915.1| type III secretion system ATPase, FliI/YscN [Desulfotomaculum reducens MI-1] Length = 442 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 157/380 (41%), Positives = 220/380 (57%), Gaps = 5/380 (1%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 +V QG+ +V+ + P+G I G V G I G+V++ Sbjct: 51 IVAQGEPEPVRAEVVGFRDQFSLLMPLGELRGIYPGCAVIPSGHNLTIKVGKHLQGKVLD 110 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG+PID G + +K P + R+R++ TG+R +D GQRIG+F Sbjct: 111 GLGRPIDKTVDYASGQ-EFLVDNKPPNPLKRKRIDSVLPTGVRAVDALLTCGKGQRIGIF 169 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226 AGSG+GKSTLL M AR D +I+L+GERGREV EF+E+ LG + +SV+V ATSD+ Sbjct: 170 AGSGVGKSTLLGMIARHGSADVNVIALIGERGREVLEFLEEDLGPQGMARSVIVAATSDQ 229 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 ++R A IAEYF +G +V+L++DS+TRFA + RE+ GE P +GY SV Sbjct: 230 PALVRLKGAFVATAIAEYFRDQGLDVMLMMDSVTRFAMAQREVGLAVGEPPATKGYTPSV 289 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F+ LP+LLER G ++ G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL R LA Sbjct: 290 FALLPKLLERSGMGQQ--GSITAFYTVLVDGDDLNEPIADAVRGILDGHIVLTRKLASAN 347 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D L SVSRL S K +L L+ ++E+ D+ IG Y G + +D A Sbjct: 348 HYPAIDVLQSVSRLMPDIASDQHKNQAGNLRDLLATYQESEDLINIGAYVLGSNPKIDHA 407 Query: 407 VHQVPIIYDFLKQSPSDLSS 426 + + I +L+QSP + SS Sbjct: 408 ISKHDEIIGYLRQSPLEYSS 427 >gi|167588175|ref|ZP_02380563.1| ATPase FliI/YscN [Burkholderia ubonensis Bu] Length = 407 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 143/320 (44%), Positives = 198/320 (61%), Gaps = 4/320 (1%) Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A G+P+D L K D + S P ++R+ + G+R I+ + Sbjct: 67 LGRVVDASGRPLDNLGPLTSKVDAPLSAASINP--LDREPIHHVLDVGVRAINALLTVGR 124 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVV Sbjct: 125 GQRMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVV 184 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP+LR A +AE+F +G +VLL++DS+TR+A + REIA GE P Sbjct: 185 VAAPADVSPLLRMQGAAYATALAEWFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPAT 244 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+ Sbjct: 245 KGYPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLS 304 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LAE G YP +D AS+SR V ++ R++ RD+ +G Y PG Sbjct: 305 RALAEAGHYPAIDIEASISRAMTALIDDTHLDHVRQFKQMLSRYQRNRDLIAVGAYAPGR 364 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D LD+A+ P I FL+Q Sbjct: 365 DAQLDRAIALYPHIEAFLQQ 384 >gi|300114780|ref|YP_003761355.1| flagellar protein export ATPase FliI [Nitrosococcus watsonii C-113] gi|299540717|gb|ADJ29034.1| flagellar protein export ATPase FliI [Nitrosococcus watsonii C-113] Length = 480 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 145/352 (41%), Positives = 211/352 (59%), Gaps = 9/352 (2%) Query: 89 HWGRFRISPSACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKT 147 H GR + GRV++ G+P+D L +S+E P + RQ + + Sbjct: 105 HGGRMAVG--EALLGRVLDGGGRPLDDLGPLRATHRVSLEGQPINP--LARQPIREPMDV 160 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G+ I+ + GQR+G+FAGSG+GKS LL M R D +++ L+GERGREV+EFIE Sbjct: 161 GVAAINALLTIGRGQRMGLFAGSGVGKSVLLGMMTRYAKADVIVVGLIGERGREVQEFIE 220 Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + LG + L +SVVV +D SP++R + A +IAEYF +G VLL++DS+TRF H+ Sbjct: 221 NILGKEGLARSVVVATPADHSPLMRIHGAMLATSIAEYFRDQGKQVLLLMDSLTRFGHAQ 280 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 RE+A GE P RGYP SVF+++P+LLER G G+ITA +VL +GD+ NDP+AD Sbjct: 281 RELALAIGEPPATRGYPPSVFAKIPQLLERAGNGRSGSGSITAFYTVLTEGDDPNDPVAD 340 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 S R+ILDGHIVL+R LAE G YP +D AS+SR+ + + ++ + + + Sbjct: 341 SARAILDGHIVLSRRLAEAGHYPAIDIEASISRVMSQITVPEHQQAAQQFKQIYSLYSQN 400 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +D+ +G Y G D LD+AV + P FL+Q D+S +E ++LQ Sbjct: 401 QDLISVGAYSRGSDSRLDEAVDKQPQFRSFLQQ---DMSRSFSVEESLERLQ 449 >gi|319787097|ref|YP_004146572.1| ATPase, FliI/YscN family [Pseudoxanthomonas suwonensis 11-1] gi|317465609|gb|ADV27341.1| ATPase, FliI/YscN family [Pseudoxanthomonas suwonensis 11-1] Length = 471 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 140/323 (43%), Positives = 209/323 (64%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M ++ P + R+ + + G+R I+ P+ G Sbjct: 129 GRVIDSDGVPLDGKGPVRAEGSVGMAGVAINP--LAREPIIQPLDVGVRAINALLPIGRG 186 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 187 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 246 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 247 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 306 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 307 GYPPSVFAKLPALVERAGNGAAGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 366 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD+ W ++ + +L L+ + RD+ IG Y+ Sbjct: 367 RIADAGLYPAIDVESSVSRVVQDIADETW----RERIRALKRLVAAYNANRDLIAIGAYQ 422 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D ++D+A+ + P I +FL Q Sbjct: 423 RGNDPVVDEALARWPEIMEFLGQ 445 >gi|317052370|ref|YP_004113486.1| ATPase, FliI/YscN family [Desulfurispirillum indicum S5] gi|316947454|gb|ADU66930.1| ATPase, FliI/YscN family [Desulfurispirillum indicum S5] Length = 439 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 152/370 (41%), Positives = 223/370 (60%), Gaps = 6/370 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ D++ + P+G I G V F + GRV+N LG PID + Sbjct: 60 EVVGFRDDVILLMPLGDLAGIGPGSRVEAMKEVFMVPVGDALVGRVLNGLGMPID-EQPE 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + + P R+R++ TG+R ID GQR+G+FAGSG+GKSTLL Sbjct: 119 PECKRLYPVQAAPPNPFTRKRIDTPIGTGVRAIDGLLTWGKGQRVGIFAGSGVGKSTLLG 178 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M A++ D +I+L+GERGREVREFIE LG D L +SV+VVATSD+ ++R+ A Sbjct: 179 MIAKNSQADINVIALIGERGREVREFIERDLGPDGLARSVIVVATSDQPALVRRQGAYVA 238 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G NV+ ++DSITRF + REI GE P +GY SVF+ LP+L+ER G Sbjct: 239 TAIAEYFRDQGKNVMFMMDSITRFCMAQREIGLAVGEPPTTKGYTPSVFALLPKLMERTG 298 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 E G+I+A+ +VLVDGD+ +P+AD+ RSILDGHI+L+R LA +P +D L S S Sbjct: 299 TGTGE-GSISALYTVLVDGDDITEPVADASRSILDGHIMLSRKLASRNHFPAIDVLGSAS 357 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + S + ++L + L +L+ + + D+ IG Y G + +D+AV ++ I FL+ Sbjct: 358 RVFGEITSGEHQELAAKLRNLMAVYGDAEDLINIGAYSKGTNKEIDRAVSRMGAINSFLR 417 Query: 419 QSPSDLSSED 428 Q+ ++ SED Sbjct: 418 QAVNE--SED 425 >gi|218133663|ref|ZP_03462467.1| hypothetical protein BACPEC_01532 [Bacteroides pectinophilus ATCC 43243] gi|217991038|gb|EEC57044.1| hypothetical protein BACPEC_01532 [Bacteroides pectinophilus ATCC 43243] Length = 441 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 144/319 (45%), Positives = 208/319 (65%), Gaps = 5/319 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G ++ LG P DG + + +E + P M R + + G++ +D + GQ Sbjct: 107 GHTLDGLGNPTDGTELTSYEEYPVE--AAPPDPMERVIISEILPLGVKAVDGLLTVGKGQ 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKSTL+ MFAR+ D +I+L+GERGREVREF+E LG + +K+SV+VV Sbjct: 165 RVGIFAGSGVGKSTLMGMFARNTKADINVIALIGERGREVREFVERDLGTEGMKRSVLVV 224 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+ ++R A TA IAEYF +G +VLL++DS+TRF+ + REI SGE PV RG Sbjct: 225 ATSDKPALIRNKAAKTATAIAEYFRDQGRDVLLMMDSLTRFSMAQREIGLASGEPPVTRG 284 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SV+SE+P+LLER G S +KG+IT + +VLVDGD+ N+PI D+ RSILDGHI+LNR Sbjct: 285 YPPSVYSEMPKLLERAGMS--DKGSITGLYTVLVDGDDFNEPITDTARSILDGHIMLNRK 342 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA++ YP VD L S+SR + + KK L ++ + E D+ IG Y+ G + Sbjct: 343 LAQKNHYPAVDVLQSISRCMSQIVDKEHKKQAGKLKQVLATYGEAEDLINIGAYKAGSNK 402 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +D A+ ++ + ++L Q Sbjct: 403 AIDYAIEKIDAVNEYLCQQ 421 >gi|254523895|ref|ZP_05135950.1| flagellar protein export ATPase FliI [Stenotrophomonas sp. SKA14] gi|219721486|gb|EED40011.1| flagellar protein export ATPase FliI [Stenotrophomonas sp. SKA14] Length = 465 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + + G+R I+ P+ G Sbjct: 126 GRVIDSDGVPLDGKGPIRAEGHVGMAGVSINP--LAREPITQPLDVGVRAINALLPIGRG 183 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 184 QRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 243 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 + +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 244 ASPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 303 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 304 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 363 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD+ W + + L L+ + RD+ IG Y+ Sbjct: 364 RVADSGLYPAIDVESSVSRVVTEIADEPW----RLRIRKLKRLVSAYSANRDLIAIGAYQ 419 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D D+A+ + P I +FL Q Sbjct: 420 RGNDAATDEALERWPEIMEFLGQ 442 >gi|190574236|ref|YP_001972081.1| putative flagellum-specific ATP synthase [Stenotrophomonas maltophilia K279a] gi|190012158|emb|CAQ45781.1| putative flagellum-specific ATP synthase [Stenotrophomonas maltophilia K279a] Length = 461 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + + G+R I+ P+ G Sbjct: 122 GRVIDSDGVPLDGKGPIRAEGHVGMAGVSINP--LAREPITQPLDVGVRAINALLPIGRG 179 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 180 QRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 239 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 + +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 240 ASPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 299 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 300 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 359 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD+ W + + L L+ + RD+ IG Y+ Sbjct: 360 RVADSGLYPAIDVESSVSRVVTEIADEPW----RLRIRKLKRLVSAYSANRDLIAIGAYQ 415 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D D+A+ + P I +FL Q Sbjct: 416 RGNDAATDEALERWPEIMEFLGQ 438 >gi|126174194|ref|YP_001050343.1| type III secretion system ATPase [Shewanella baltica OS155] gi|125997399|gb|ABN61474.1| ATPase, FliI/YscN family [Shewanella baltica OS155] Length = 443 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 159/368 (43%), Positives = 222/368 (60%), Gaps = 8/368 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + + + P + + G+LV G P GRV++ LG P+DG Sbjct: 65 EVVAVKGNEALLSPFDVTAGLCSGELVETLGHGHQVPLGQGLLGRVVDGLGAPMDG---Y 121 Query: 120 GKGDLSMEI-MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 G ++ P ++RQ ++ GIR ID GQRIG+FA +G GKSTLL Sbjct: 122 GLTATALRPNQGSAPNPLSRQLIDTVMPMGIRAIDSALACGVGQRIGIFAAAGGGKSTLL 181 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237 M A D ++++LVGERGREVREFIE L + ++V+VVATSD P+ R A LT Sbjct: 182 GMIAAHCQADVIVLALVGERGREVREFIEYNLTPEARARTVMVVATSDRPPLERMKATLT 241 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A TIAEYF +G NVLL++DS+TRFA S REIA +GE PV+ GYP SVF L L+ER Sbjct: 242 ATTIAEYFRDQGKNVLLMVDSLTRFARSAREIALAAGESPVSSGYPPSVFVNLSALVERA 301 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 GP+ +G+IT + +VLV+GD+ N+PIAD VRS+LDGHIVL+R LA G YP +D ASV Sbjct: 302 GPA--AQGSITGIYTVLVEGDDMNEPIADEVRSLLDGHIVLSRRLAGAGHYPAIDINASV 359 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ D+ S +++ + + L+ ++E + + +G Y G D D+AV + I FL Sbjct: 360 SRVMDQIVSPEQRCHAAKMRQLLALYQEVQLLIRVGEYVKGADKETDEAVARHQDIQQFL 419 Query: 418 KQSPSDLS 425 QS ++ S Sbjct: 420 CQSVNEFS 427 >gi|258514006|ref|YP_003190228.1| ATPase, FliI/YscN family [Desulfotomaculum acetoxidans DSM 771] gi|257777711|gb|ACV61605.1| ATPase, FliI/YscN family [Desulfotomaculum acetoxidans DSM 771] Length = 441 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 158/396 (39%), Positives = 231/396 (58%), Gaps = 7/396 (1%) Query: 32 VYYTVTCLSQYVCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH 89 V TV + +G+ V+ G++ + +V+ + P+G + I G+ V Sbjct: 33 VGLTVEVVGIKASIGEVCHVIVPGRSRPIVAEVVGFMQGASILMPLGELQGIQPGNQVVP 92 Query: 90 WGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148 GR + S G V++ LG+ I G + G+ + ++ P + RQR+ + TG Sbjct: 93 TGRNLTVEVSDDMLGSVLDGLGRQIGGKTA-GEQKTKFPVDNQPPNPLTRQRIAQVLPTG 151 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208 +R ID GQRIG+FAGSG+GKSTLL M A+ D +I L+GERGREV++FIE Sbjct: 152 VRAIDSVLTCGQGQRIGIFAGSGVGKSTLLGMIAKYGKADVNVIGLIGERGREVKDFIET 211 Query: 209 YLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 LG+ L +SVVV ATSD+ ++R + A +AEYF +KG NV+L++DS+TRFA + R Sbjct: 212 DLGEEGLSRSVVVAATSDQPALIRLKGAMVATALAEYFRNKGLNVMLLMDSVTRFAMAQR 271 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E+ GE P +GY SVF+ LP+LLER G S + G+ITA +VLVDGD+ N+PIAD+ Sbjct: 272 EVGLAVGEPPATKGYTPSVFALLPKLLERSGMSVE--GSITAFYTVLVDGDDMNEPIADA 329 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387 VR ILDGHIVL R LA + YP +D L+SVSR+ + + + L L+ + + Sbjct: 330 VRGILDGHIVLTRRLAAKNHYPAIDVLSSVSRVMSDIVNPEHLSRAARLRELLSTYLQAE 389 Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 D+ IG Y G + +D A+ I +FL+Q P + Sbjct: 390 DLISIGAYNFGANPKIDDAIRHYDNIIEFLRQHPEE 425 >gi|187926894|ref|YP_001893239.1| flagellar protein export ATPase FliI [Ralstonia pickettii 12J] gi|241665223|ref|YP_002983582.1| ATPase, FliI/YscN family [Ralstonia pickettii 12D] gi|187728648|gb|ACD29812.1| flagellar protein export ATPase FliI [Ralstonia pickettii 12J] gi|240867250|gb|ACS64910.1| ATPase, FliI/YscN family [Ralstonia pickettii 12D] Length = 479 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 142/324 (43%), Positives = 202/324 (62%), Gaps = 7/324 (2%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A G+P+DG LG D L+ ++ P + R+ +E G+R I+ + Sbjct: 136 GRVVDANGEPLDGKGPLGNPDELAWGTLAPAPLNPLKRKPIENVMDVGVRAINGLLTVGQ 195 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D V++ L+GERGREV+EFI++ LGD L +S V Sbjct: 196 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 255 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R A TIAEYF +G NVLLI+DS+TR+A + REIA GE P Sbjct: 256 VAAPADTSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 315 Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +GYP S F++LP L+ER G ++ G+ITA +VL +GD+ DPIAD+ R+ILDGH Sbjct: 316 KGYPPSAFAKLPALVERAGNGMVDADGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 375 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R LAE+G YP +D S+SR+ ++ L R++ RD+ +G Y Sbjct: 376 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDTARRFKQLYARYQRNRDLIAVGAY 435 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G D + D+A+ + P + FL+Q Sbjct: 436 ARGSDPVTDQAIARYPDMEAFLQQ 459 >gi|194365654|ref|YP_002028264.1| FliI/YscN family ATPase [Stenotrophomonas maltophilia R551-3] gi|194348458|gb|ACF51581.1| ATPase, FliI/YscN family [Stenotrophomonas maltophilia R551-3] Length = 461 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + + G+R I+ P+ G Sbjct: 122 GRVIDSDGVPLDGKGPIRAEGHVGMAGVSINP--LAREPITQPLDVGVRAINALLPIGRG 179 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 180 QRVGLFAGSGVGKSTLLGMMTRYTAADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 239 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 + +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 240 ASPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 299 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 300 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 359 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD+ W + + L L+ + RD+ IG Y+ Sbjct: 360 RVADSGLYPAIDVESSVSRVVTEIADEPW----RLRIRKLKRLVSAYSANRDLIAIGAYQ 415 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D D+A+ + P I +FL Q Sbjct: 416 RGNDAATDEALERWPEIMEFLGQ 438 >gi|289670550|ref|ZP_06491625.1| flagellum-specific ATP synthase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 382 Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 147/343 (42%), Positives = 210/343 (61%), Gaps = 15/343 (4%) Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI++ G P+DG + +G + M +S P + R+ + G+R I+ P+ Sbjct: 42 LGRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGR 99 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219 GQR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VV Sbjct: 100 GQRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVV 159 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P Sbjct: 160 VAAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTT 219 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+ Sbjct: 220 RGYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLS 279 Query: 340 RSLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 R +A+ G YP +D +SVSR +AD W +K L L+ + RD+ IG Y Sbjct: 280 RRVADSGLYPAIDLESSVSRVVQDIADDTWRLRIRK----LKRLLSAYTANRDLIAIGAY 335 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + G D D+A+ + P I +FL Q D+ V + LQ Sbjct: 336 QRGSDPATDEALARWPEIVEFLGQ---DVHKASVLSDSLSALQ 375 >gi|163750547|ref|ZP_02157785.1| flagellum-specific ATP synthase [Shewanella benthica KT99] gi|161329702|gb|EDQ00691.1| flagellum-specific ATP synthase [Shewanella benthica KT99] Length = 446 Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 154/389 (39%), Positives = 235/389 (60%), Gaps = 15/389 (3%) Query: 57 DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115 D + +VI + +++Y+ P+ + G V G + ++ GRV++ G+P+D Sbjct: 59 DMVAEVIGFDDELLYLMPIEELRGVLPGAKVTPLGEQTGLNVGLALLGRVLDGNGQPLD- 117 Query: 116 DDSLGKGDLSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 +LG+ + K P P +N R+ + + G+R I+ + GQR+G+FAG Sbjct: 118 --NLGR----LHTDQKAPRHAPTINPLARRAITEPLDVGVRAINAMLTVGKGQRMGLFAG 171 Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228 SG+GKS LL M R D +++ LVGERGREV+EFIE+ LG+ + +SVVV A +D SP Sbjct: 172 SGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEEGRARSVVVAAPADTSP 231 Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 ++R A T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF+ Sbjct: 232 LMRLRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFA 291 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +LP+L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLA+ G Y Sbjct: 292 KLPKLVERAGNGGPGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLADSGHY 351 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 P +D AS+SR+A S + + + + + F++ +D+ IG Y G D +D A+ Sbjct: 352 PAIDIEASISRVAPMVISTEHLESMRRVKQVYSLFQQNKDLISIGAYTQGSDPRIDNAIR 411 Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 P + FL+Q+ ++ S D Q + +L Sbjct: 412 LQPAMNAFLRQTMTESLSFDSSQLMLSQL 440 >gi|283853244|ref|ZP_06370495.1| ATPase, FliI/YscN family [Desulfovibrio sp. FW1012B] gi|283571349|gb|EFC19358.1| ATPase, FliI/YscN family [Desulfovibrio sp. FW1012B] Length = 441 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 147/335 (43%), Positives = 211/335 (62%), Gaps = 5/335 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 + GRVI+A G PIDG + + + + + P M+R R+ + G+R I+ L Sbjct: 103 YLGRVIDAFGTPIDGGEPIFPARFN-PVFADAPMPMDRPRISEPMDVGVRAINGLLTLGK 161 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+ AGSG+GKSTL+ M AR+ D +I LVGERGRE+REFIE LG + + +SVV Sbjct: 162 GQRVGIMAGSGVGKSTLMGMIARNTKADVNVIGLVGERGRELREFIEKDLGPEGMARSVV 221 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD+SP++R A A +AE+F G++V+L++DS+TRFA + RE+ +GE P Sbjct: 222 VVATSDQSPLIRMRAAYAATAMAEFFRDAGNDVILMMDSVTRFAMAGREVGLAAGEPPTT 281 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGY SVF++LP+LLER G G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL Sbjct: 282 RGYTPSVFAQLPKLLERAG--RNNNGSITGIYTVLVDGDDFNEPIADAVRSILDGHIVLT 339 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA++G +P +D L S+SRL D L L+ + D+ IG Y G Sbjct: 340 RDLADQGHFPAIDVLKSISRLRSDVTPKDALAAGRDLIRLLATYRRVEDMVNIGAYARGA 399 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 + +D+A+ + I +L+Q ++ S E+ F + Sbjct: 400 NPEIDRAIDMIGPINGYLRQEVAESQSLEESFAAV 434 >gi|205352869|ref|YP_002226670.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205272650|emb|CAR37560.1| putative type III secretion ATP synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|309243397|gb|ADO51973.1| SsaN [Salmonella enterica subsp. enterica serovar Gallinarum] gi|326627941|gb|EGE34284.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 433 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRSHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|254253720|ref|ZP_04947037.1| Flagellar biosynthesis/type III secretory pathway ATPase [Burkholderia dolosa AUO158] gi|124898365|gb|EAY70208.1| Flagellar biosynthesis/type III secretory pathway ATPase [Burkholderia dolosa AUO158] Length = 463 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 157/368 (42%), Positives = 223/368 (60%), Gaps = 10/368 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117 +V+ + D+ + P G +S V R RI P GRVI++LG+PIDG Sbjct: 85 EVVGFSRDVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPR--LLGRVIDSLGEPIDGKG 142 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + D +++ P M+R V+ TG+RV+D L GQR+G+FA +G+GKSTL Sbjct: 143 PL-ECDEWQPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTL 201 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 + MFAR D +I+L+GERGREVREF E LG D + +SVVV ATSD S I R A Sbjct: 202 MGMFARGARCDVNVIALIGERGREVREFCEHILGPDGMARSVVVCATSDRSSIERAKAAY 261 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +AEYF +G VLL++DS+TRFA + REI GE P RG+P S+F+ELPRLLER Sbjct: 262 AATAVAEYFRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLER 321 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S E G+ITA+ +VL + ++ DPIA+ VR ILDGH++L+R +A + RYP +D L S Sbjct: 322 AGRS--EHGSITALYTVLAEDESGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGS 379 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ + + + L+ + +E + +G Y+ G D + D+A+ ++ I F Sbjct: 380 LSRVMTQVVPREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIAKIDAIRAF 439 Query: 417 LKQSPSDL 424 L Q P+DL Sbjct: 440 LGQ-PTDL 446 >gi|10955560|ref|NP_052401.1| type III secretion system ATPase [Yersinia enterocolitica] gi|732261|sp|P40290|YSCN_YEREN RecName: Full=Probable ATP synthase YscN; AltName: Full=Yop proteins secretion ATPase gi|4324347|gb|AAD16824.1| ATPase YscN [Yersinia enterocolitica W22703] gi|318608201|emb|CBY78175.1| type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN) [Yersinia enterocolitica subsp. palearctica Y11] Length = 439 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 202/324 (62%), Gaps = 4/324 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V++ LG+P DG L + + P M+R+ + GIRVID GQ Sbjct: 105 GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 163 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FA +G GKSTLL+ RS D +++L+GERGREVREFIE LG+ L+K+V+VV Sbjct: 164 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLRKAVLVV 223 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD + R A A +IAEYF +G VLL++DS+TRFA + REI +GE P RG Sbjct: 224 ATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 283 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LPRL+ER G S K G+ITA+ +VLV+GD+ +P+AD RSILDGHI+L+R Sbjct: 284 YPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 341 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA YP +D L S SR+ ++ S + K L L+ ++EE + IG Y+ G D Sbjct: 342 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQDK 401 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425 D+A+ ++ I +L Q +LS Sbjct: 402 EADQAIERIGAIRGWLCQGTHELS 425 >gi|78047551|ref|YP_363726.1| flagellar biosynthesis/type III secretory pathway ATPase FliI [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|294664062|ref|ZP_06729464.1| flagellar biosynthesis/type III secretory pathway ATPase FliI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325926456|ref|ZP_08187777.1| ATPase FliI/YscN family [Xanthomonas perforans 91-118] gi|78035981|emb|CAJ23672.1| flagellar biosynthesis/type III secretory pathway ATPase FliI [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|292606165|gb|EFF49414.1| flagellar biosynthesis/type III secretory pathway ATPase FliI [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325543155|gb|EGD14597.1| ATPase FliI/YscN family [Xanthomonas perforans 91-118] Length = 458 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 142/323 (43%), Positives = 204/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + G+R I+ P+ G Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSIGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD W + + L L+ + RD+ IG Y+ Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D D+A+ + P I +FL Q Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ 435 >gi|294496835|ref|YP_003560532.1| type III secretion system ATPase [Yersinia pestis Z176003] gi|322836566|ref|YP_004210062.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis Java 9] gi|262363846|gb|ACY60566.1| type III secretion system ATPase [Yersinia pestis D106004] gi|262364003|gb|ACY64340.1| type III secretion system ATPase [Yersinia pestis D182038] gi|294352423|gb|ADE66480.1| type III secretion system ATPase [Yersinia pestis Z176003] gi|321161340|gb|ADW67046.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis Java 9] Length = 410 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 202/324 (62%), Gaps = 4/324 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V++ LG+P DG L + + P M+R+ + GIRVID GQ Sbjct: 76 GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 134 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221 R+G+FA +G GKSTLL+ RS D +++L+GERGREVREFIE LG+ L+K+V+VV Sbjct: 135 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLRKAVLVV 194 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD + R A A +IAEYF +G VLL++DS+TRFA + REI +GE P RG Sbjct: 195 ATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 254 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LPRL+ER G S K G+ITA+ +VLV+GD+ +P+AD RSILDGHI+L+R Sbjct: 255 YPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 312 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA YP +D L S SR+ ++ S + K L L+ ++EE + IG Y+ G D Sbjct: 313 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQDK 372 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425 D+A+ ++ I +L Q +LS Sbjct: 373 EADQAIERMGAIRGWLCQGTHELS 396 >gi|207857079|ref|YP_002243730.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|206708882|emb|CAR33212.1| putative type III secretion ATP synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 433 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|169831908|ref|YP_001717890.1| flagellar protein export ATPase FliI [Candidatus Desulforudis audaxviator MP104C] gi|169638752|gb|ACA60258.1| flagellar protein export ATPase FliI [Candidatus Desulforudis audaxviator MP104C] Length = 454 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 162/422 (38%), Positives = 242/422 (57%), Gaps = 12/422 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G ++ + + V L+ ++ V G+ G+V+ + P+G I Sbjct: 27 GRVTKVVGLTVEVEGLNSFIGEICEVYVPGEIQPVRGEVVGFRGGTSLLMPLGELRGIRP 86 Query: 84 GDLVFHWGR-FRISPSACWCGRVINALGKPI--DGDDSLGK---GDLSMEIMSKVPPAMN 137 G V GR + G+V+N LG P+ GD G G + + P ++ Sbjct: 87 GCRVEPLGRALTVRVGEHLLGQVVNGLGYPLANGGDTRNGTRPDGAEEYPVHNAPPDPLS 146 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+R+++ +TG+R ID F GQR+GVF+GSG+GKS LL M R D +++LVGE Sbjct: 147 RRRIDRPLETGVRAIDGFLTCGRGQRLGVFSGSGVGKSVLLGMLCRHCSADVNVVALVGE 206 Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV++FIE LG ++L +SVVVVATSD+ ++R A + A IAEYF +G +VL ++ Sbjct: 207 RGREVKDFIERDLGPESLARSVVVVATSDQPALIRLRAAMVATAIAEYFRDRGKDVLFLM 266 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TRFA + RE+ GE P RGY SVF+ LP+LLER G S G+IT +VLV+ Sbjct: 267 DSVTRFALAQREVGLAVGEPPTTRGYTPSVFALLPKLLERAGTSPA--GSITGFYTVLVE 324 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 GD+ +P+AD+VRSILDGHIVL+R LA + YP +D L SVSRL + + ++ + L Sbjct: 325 GDDLQEPVADAVRSILDGHIVLDRELAAKNHYPAIDVLQSVSRLMPDITAPEHQRCAAKL 384 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436 L+ F++ D+ IG Y G + ++D+A+ + I +FL+Q ++ F E + Sbjct: 385 RRLLAAFKQAEDLVNIGAYVSGSNPLVDEALAKHEAIMEFLRQDHTEFGG---FAESLAR 441 Query: 437 LQ 438 LQ Sbjct: 442 LQ 443 >gi|21231371|ref|NP_637288.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768576|ref|YP_243338.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004] gi|21113034|gb|AAM41212.1| flagellar protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573908|gb|AAY49318.1| flagellar protein [Xanthomonas campestris pv. campestris str. 8004] Length = 458 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 140/319 (43%), Positives = 202/319 (63%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + G+R I+ P+ G Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +A+ G YP +D +SVSR+ + + + L L+ + RD+ IG Y+ G D Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIANDTWRLRIRKLKRLLSAYTANRDLIAIGAYQRGSD 416 Query: 401 LILDKAVHQVPIIYDFLKQ 419 D+A+ + P I DFL Q Sbjct: 417 PATDEALARWPEIVDFLGQ 435 >gi|73538925|ref|YP_299292.1| ATPase FliI/YscN [Ralstonia eutropha JMP134] gi|72122262|gb|AAZ64448.1| ATPase FliI/YscN [Ralstonia eutropha JMP134] Length = 488 Score = 266 bits (679), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 147/333 (44%), Positives = 205/333 (61%), Gaps = 8/333 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVEKGFKT 147 G R+ GRV++A G+P+DG LG + E+ ++ P M R ++ T Sbjct: 135 GSKRLPVGEGMLGRVVDAAGRPLDG---LGPIRAAQEVPLSAEQINPLM-RAPIQTVLDT 190 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G+R I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE Sbjct: 191 GVRAINGMLTVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIE 250 Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 LG + +SVVV A +D SP+LR + +AEYF +G +VLLI+DS+TR+A + Sbjct: 251 HILGPEGRARSVVVAAPADCSPLLRMQGAAYSTRLAEYFRDQGKHVLLIMDSLTRYAMAQ 310 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REIA GE P +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIAD Sbjct: 311 REIALAIGEPPATKGYPPSVFAKLPTLVERTGNGPEGGGSITAFYTVLTEGDDQQDPIAD 370 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 S R+ILDGH+VL+RSLAE G YP +D AS+SR ++ V L+ R++ Sbjct: 371 SARAILDGHVVLSRSLAEAGHYPAIDVEASISRAMTALIPPEQFSSVRRFKQLMSRYQRN 430 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 RD+ +G Y PG D LD A+ P + FL+Q Sbjct: 431 RDLISVGAYVPGNDPELDLAIRLHPRMEAFLQQ 463 >gi|167551616|ref|ZP_02345370.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205323605|gb|EDZ11444.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] Length = 433 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVDEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|148266220|ref|YP_001232926.1| flagellar protein export ATPase FliI [Geobacter uraniireducens Rf4] gi|146399720|gb|ABQ28353.1| type III secretion system ATPase, FliI/YscN [Geobacter uraniireducens Rf4] Length = 443 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 149/354 (42%), Positives = 214/354 (60%), Gaps = 5/354 (1%) Query: 72 ICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 + P+G + LG L+ + + GRVI+ LG PID ++ G+ Sbjct: 72 LMPLGELRGVGLGSLISVRREKASLGVGPALLGRVIDGLGSPIDDRGAIITGEEYPIYAM 131 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 V P M R+ + + GIR I+ GQR+G+ AGSG+GKSTLL M AR D Sbjct: 132 PVNP-MKRRPIREPLDLGIRAINGLLTCGEGQRVGIMAGSGVGKSTLLGMIARYTEADVN 190 Query: 191 IISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I+L+GERGRE+REFIE D + LKKSVVVVATSD+ P++R A TIAEYF ++G Sbjct: 191 VIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQG 250 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VLL++DS TRFA ++RE+ GE P +GY SVF+ LP+LLER G G+IT Sbjct: 251 KKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERAG--NFHGGSITG 308 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLV+GD+ N+P++D++RSILDGHI+L+R LA YPP+D L S SR+ S + Sbjct: 309 LYTVLVEGDDFNEPVSDAMRSILDGHIILSRELAARNIYPPIDVLNSASRVMMDVTSREH 368 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 +KL ++ + + D+ IG Y+PG + +D A+ ++ + +LKQ +D Sbjct: 369 QKLAGGFKGVLATYRQAEDLINIGAYKPGSNPKIDYAIAKIEHMNSYLKQDVND 422 >gi|283786637|ref|YP_003366502.1| T3SS translocator EscN [Citrobacter rodentium ICC168] gi|282950091|emb|CBG89725.1| T3SS translocator EscN [Citrobacter rodentium ICC168] Length = 446 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 154/379 (40%), Positives = 219/379 (57%), Gaps = 8/379 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +VI IN D V++ P + G + + G F+I GR+++ +G+P+ + Sbjct: 67 LAEVIAINGDEVFLLPFEHVSGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNI 126 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GKSTL Sbjct: 127 ATLYLPFKRSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTL 186 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237 L M D ++++L+GERGREV EF+ L K V+VV TSD + R A T Sbjct: 187 LGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFT 246 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LLER Sbjct: 247 ATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERA 306 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D S Sbjct: 307 GPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSA 364 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ ++ + + LI ++ + IG Y G D DKA+ I FL Sbjct: 365 SRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSFL 424 Query: 418 KQSPSDLSS-----EDVFQ 431 +QS D+SS E++F+ Sbjct: 425 QQSTKDISSYEKTIENLFK 443 >gi|95929852|ref|ZP_01312593.1| ATPase FliI/YscN [Desulfuromonas acetoxidans DSM 684] gi|95134148|gb|EAT15806.1| ATPase FliI/YscN [Desulfuromonas acetoxidans DSM 684] Length = 442 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 146/318 (45%), Positives = 204/318 (64%), Gaps = 3/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A+G IDG S D M + S P M R+++ G+R I+ GQ Sbjct: 98 GRVLDAMGHAIDGLPS-PVLDQEMPVYSLPPGPMQRKKISDPLDLGVRAINGLLTCGRGQ 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+ AGSG+GKS LL A+ D +I+L+GERGREVREFIE LG+ L +SVV+V Sbjct: 157 RMGIMAGSGVGKSVLLGTMAKHSQSDINVIALIGERGREVREFIERDLGEEGLARSVVLV 216 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+SP+LR A T+AEYF +G NVLL++DS+TRFA ++RE+ GE P +G Sbjct: 217 ATSDQSPLLRMRGAFVATTLAEYFCQQGHNVLLMMDSVTRFAMAMREVGLAIGEPPTTKG 276 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF+ LP+LLER G S KE+G+IT + +VLV+GD+ N+PIADSVRSILDGHIVL+R Sbjct: 277 YTPSVFATLPKLLERAG-SFKEQGSITGLYTVLVEGDDMNEPIADSVRSILDGHIVLSRD 335 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA + YP +D L S SR+ + + + + ++ +E D+ IG Y G + Sbjct: 336 LAAKNHYPCIDILHSASRVMRDIVDPEHVQSAAQIREILATHKEAEDLINIGAYVAGSNP 395 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A+ ++ + DFL+Q Sbjct: 396 KIDYAISRIDAVNDFLRQ 413 >gi|24374737|ref|NP_718780.1| flagellum-specific ATP synthase [Shewanella oneidensis MR-1] gi|24349399|gb|AAN56224.1|AE015760_3 flagellum-specific ATP synthase FliI [Shewanella oneidensis MR-1] Length = 445 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 146/367 (39%), Positives = 224/367 (61%), Gaps = 3/367 (0%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117 + +V+ + +++Y+ P+ + G V G + ++ GRV++ G P+DG Sbjct: 61 IAEVVGFDDELLYLMPIEELRGVLPGARVVPLGEQAGLNVGLSLLGRVLDGNGVPLDGLG 120 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 +L + + + P ++R+ + + G+R I+ + GQR+G+FAGSG+GKS L Sbjct: 121 ALSTEQQAPRHSNAINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M R D +++ LVGERGREV+EFIE+ LG+ + +SVVV A +D SP++R A Sbjct: 180 LGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRACE 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LPRL+ER Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLA+ G YP +D AS Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEAS 359 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+A S + + + + +++ +D+ IG Y G D +D A+ P + F Sbjct: 360 ISRVAPMVISNEHLEAMRRVKQTYSLYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAF 419 Query: 417 LKQSPSD 423 L+Q+ D Sbjct: 420 LRQTMRD 426 >gi|127512300|ref|YP_001093497.1| flagellum-specific ATP synthase [Shewanella loihica PV-4] gi|126637595|gb|ABO23238.1| flagellar protein export ATPase FliI [Shewanella loihica PV-4] Length = 446 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 152/377 (40%), Positives = 225/377 (59%), Gaps = 9/377 (2%) Query: 57 DNLGQVIRINLDIVYICPVGIGEEIS---LGDLVFHWG-RFRISPSACWCGRVINALGKP 112 D + +VI + ++Y+ P+ EE+S G V G + ++ GRV++ G P Sbjct: 59 DLIAEVIGFDDKLLYLMPI---EELSGVMPGAKVTPLGEQTGLNVGMGLLGRVLDGNGAP 115 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 IDG L + + + P + R+ + + G+R I+ + GQR+G+FAGSG+ Sbjct: 116 IDGLGQLHTDQKATRHATMLNP-LARRAISEPLDVGVRAINAMLTVGKGQRMGLFAGSGV 174 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231 GKS LL M R D +++ LVGERGREV+EFIE+ LG + +SVVV A +D SP++R Sbjct: 175 GKSVLLGMMTRGTTADVIVVGLVGERGREVKEFIEEILGAEGRSRSVVVAAPADTSPLMR 234 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LP Sbjct: 235 LRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLP 294 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 +L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R+LA+ G YP + Sbjct: 295 KLVERAGNGGAGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRALADSGHYPAI 354 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D AS+SR+A S + + + +++ RD+ IG Y G D +D A+ P Sbjct: 355 DVEASISRVAPMVISDAHLEATRRVKQMYSLYQQNRDLISIGAYTQGSDPRIDNAIRLQP 414 Query: 412 IIYDFLKQSPSDLSSED 428 + FL+Q+ + S D Sbjct: 415 AMNAFLRQTMKEAISFD 431 >gi|258622519|ref|ZP_05717541.1| flagellum-specific ATP synthase [Vibrio mimicus VM573] gi|258585219|gb|EEW09946.1| flagellum-specific ATP synthase [Vibrio mimicus VM573] Length = 455 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 142/368 (38%), Positives = 223/368 (60%), Gaps = 5/368 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + + Y+ P+ +G + ++ G + S W GRV+N LG+ +D Sbjct: 72 AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQISNQWLGRVVNGLGEALDDGPV 131 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L +G+ +S+E SK + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 132 LNEGERVSLE--SKPINPLKRRPVDTPLDVGVRAINGLITVGKGQRIGLMAGSGVGKSVL 189 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236 + M ++ D +++ +GERGREVREFIE L KK++++ A +DESP++R A L Sbjct: 190 MGMITQNTDADVIVVGFIGERGREVREFIERTLTPTARKKAIIIAAPADESPLMRLRATL 249 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 + EYF KG +VLL++DS+TR+A + REIA GE P +RGYP SVFS LP+LLER Sbjct: 250 LCHRVGEYFRDKGQDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLER 309 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE + G++TA+ +VL +GD+ DP+ DS R+ILDG++VL+R LAE+G YP +D AS Sbjct: 310 AGNSENQDGSLTAIYTVLAEGDDQQDPVVDSARAILDGNVVLSRQLAEQGHYPAIDINAS 369 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + + +++ +GGY+PG D LD+++ P + + Sbjct: 370 LSRCMMSCTQPTHSDTANQFRQFYSNYLQVKELLPLGGYQPGQDPELDRSLALYPQLQAY 429 Query: 417 LKQSPSDL 424 L+Q+ +++ Sbjct: 430 LQQAANEV 437 >gi|168239299|ref|ZP_02664357.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194738136|ref|YP_002114428.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194713638|gb|ACF92859.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197287999|gb|EDY27386.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 433 Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVTALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|288573027|ref|ZP_06391384.1| ATPase, FliI/YscN family [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568768|gb|EFC90325.1| ATPase, FliI/YscN family [Dethiosulfovibrio peptidovorans DSM 11002] Length = 448 Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 157/382 (41%), Positives = 226/382 (59%), Gaps = 9/382 (2%) Query: 54 KNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK 111 K NL +V+ D V + P+G +I G V GR ++ + GR+++ LG+ Sbjct: 57 KGRKNLEAEVVGFRDDRVLLMPLGELRDIGPGCEVVSMGRPLGVNVGSGLLGRILDGLGR 116 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 P+D +G + + + P + RQ + + G+R +D L GQRIG+F+GSG Sbjct: 117 PMDEKGPVGSSEF-YPLYATPPHPLRRQNISEPLPVGVRAVDGVLTLGRGQRIGIFSGSG 175 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230 +GKSTLL M AR+ + +I LVGERGREVREFIE LG + LK+SV+VVATSD+ P++ Sbjct: 176 VGKSTLLGMMARNTEAEINVIGLVGERGREVREFIERDLGPEGLKRSVLVVATSDQPPLV 235 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R A TA +AEYF +G +VLL++DS+TR A++ RE+ GE P RGY SVF+ L Sbjct: 236 RLKAAFTATAVAEYFRDQGKDVLLMMDSVTRVAYAQREVGLAVGEPPATRGYTPSVFALL 295 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 PRLLER G +G+IT + +VLV+GD+ N+P+ADSVR ILDGH+VL+R +A YP Sbjct: 296 PRLLERAGAG--TRGSITGIYTVLVEGDDMNEPVADSVRGILDGHVVLSRKIAARNFYPC 353 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410 +D L SVSR+ + ++ R+ E D+ IG Y G + D A+ + Sbjct: 354 IDILNSVSRVMPSIVDKVHLDGAGRIREVLARYAEAEDLIAIGAYHKGSNPRADWALDNL 413 Query: 411 PIIYDFLKQSPSDLSSEDVFQE 432 + FL+Q + SS F+E Sbjct: 414 GDVEAFLRQGIGEASS---FEE 432 >gi|168463175|ref|ZP_02697106.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197249395|ref|YP_002146627.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|195634193|gb|EDX52545.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197213098|gb|ACH50495.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Agona str. SL483] Length = 433 Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|21242695|ref|NP_642277.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306] gi|21108168|gb|AAM36813.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306] Length = 458 Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 142/323 (43%), Positives = 204/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + G+R I+ P+ G Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSIGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD W + + L L+ + RD+ IG Y+ Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D D+A+ + P I +FL Q Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ 435 >gi|323256480|gb|EGA40213.1| type III secretion system ATPase SsaN [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] Length = 392 Score = 265 bits (678), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 8 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVTALRRRHQVPVGEALLGRVIDGFGRP 67 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 68 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 125 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 126 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 185 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 186 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 245 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 246 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 303 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 304 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 363 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 364 DICTFLRQSKDEVCGPELLIE 384 >gi|145597142|ref|YP_001154606.1| type III secretion system ATPase [Yersinia pestis Pestoides F] gi|145212910|gb|ABP42316.1| type III secretion system ATPase, FliI/YscN [Yersinia pestis Pestoides F] Length = 439 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 202/324 (62%), Gaps = 4/324 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V++ LG+P DG L + + P M+R+ + GIRVID GQ Sbjct: 105 GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 163 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FA +G GKSTLL+ RS D +++L+GERGREVREFIE LG+ L+K+V+VV Sbjct: 164 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLRKAVLVV 223 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD + R A A +IAEYF +G VLL++DS+TRFA + REI +GE P RG Sbjct: 224 ATSDRPSLERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 283 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LPRL+ER G S KG+ITA+ +VLV+GD+ +P+AD RSILDGHI+L+R Sbjct: 284 YPPSVFAALPRLMERAGQS--SKGSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 341 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA YP +D L S SR+ ++ S + K L L+ ++EE + IG Y+ G D Sbjct: 342 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQDK 401 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425 D+A+ ++ I +L Q +LS Sbjct: 402 EADQAIERMGAIRGWLCQGTHELS 425 >gi|289666084|ref|ZP_06487665.1| flagellum-specific ATP synthase [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 458 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 142/323 (43%), Positives = 204/323 (63%), Gaps = 12/323 (3%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI++ G P+DG + +G + M +S P + R+ + G+R I+ P+ G Sbjct: 119 GRVIDSDGTPLDGKGPIRAEGSVGMAGVSINP--LAREPITTSLDVGVRAINAMLPIGRG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKSTLL M R D +++ L+GERGREVR+F+E LG+ L+++VVV Sbjct: 177 QRVGLFAGSGVGKSTLLGMMTRFTSADVIVVGLIGERGREVRDFVETTLGEEGLRRAVVV 236 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+ R A IAE+F +G NVLL++DS+TRFA + REI + GE P R Sbjct: 237 AAPADRPPLARLHGAYRATAIAEWFRDQGLNVLLLMDSLTRFAQAQREIGLSVGEPPTTR 296 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G K +G+ITA +VL +GD+ DPIAD+ R+ILDGHI+L+R Sbjct: 297 GYPPSVFAKLPALVERAGNGAKGRGSITAFYTVLTEGDDPQDPIADAARAILDGHILLSR 356 Query: 341 SLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +A+ G YP +D +SVSR +AD W + + L L+ + RD+ IG Y+ Sbjct: 357 RVADSGLYPAIDLESSVSRVVQDIADDTW----RLRIRKLKRLLSAYTANRDLIAIGAYQ 412 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D D+A+ + P I +FL Q Sbjct: 413 RGSDPATDEALARWPEIVEFLGQ 435 >gi|156974019|ref|YP_001444926.1| type III secretion system ATPase [Vibrio harveyi ATCC BAA-1116] gi|41834180|gb|AAS13318.1| VscN [Vibrio harveyi] gi|156525613|gb|ABU70699.1| hypothetical protein VIBHAR_01730 [Vibrio harveyi ATCC BAA-1116] Length = 440 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G++++ LG+P DG S + + Sbjct: 88 VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGSQST-EPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG+ + +SV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + + ++ ++EE + IG Y+ G D D A+ Q I FL+Q PS+L Sbjct: 371 APAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTHEPSEL 427 >gi|304412516|ref|ZP_07394122.1| ATPase, FliI/YscN family [Shewanella baltica OS183] gi|307307175|ref|ZP_07586913.1| ATPase, FliI/YscN family [Shewanella baltica BA175] gi|304349158|gb|EFM13570.1| ATPase, FliI/YscN family [Shewanella baltica OS183] gi|306910414|gb|EFN40845.1| ATPase, FliI/YscN family [Shewanella baltica BA175] Length = 445 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 154/383 (40%), Positives = 233/383 (60%), Gaps = 12/383 (3%) Query: 45 LGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD +G+N + +V+ + D++ + P+ + + G V I+ Sbjct: 39 MGDRCQIEGRNGRLIEAEVVGFHRDVLCLMPIEPTQGLMPGARVLPITDEQTIAIGDGLL 98 Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPL 158 GRV++ LG+P+D SLG DL+ + +S+ + N RQ + + GIR I+ P+ Sbjct: 99 GRVLDGLGQPLD---SLG--DLTDISQVSQSHTSYNPLLRQPIRQPLDVGIRAINSLLPI 153 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 GQR+G+FAGSG+GKS LL M R D V++ L+GERGREVREFIE+ LG+ K++ Sbjct: 154 GRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVREFIEETLGEEGRKRA 213 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 V++ A +D +P++R A + +IA F +G VLL++DS+TR+A + REIA + GE P Sbjct: 214 VIIAAPADTTPLMRLRAMRLSHSIACAFRDQGKQVLLLVDSLTRYAQAQREIALSLGEPP 273 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP S F++LPRL+E G E G +TA +VL +GD+ DP+AD+ R+ILDGHIV Sbjct: 274 ATKGYPPSAFAQLPRLVEMAGNGEHPTGTLTAFYTVLAEGDDQQDPVADAARAILDGHIV 333 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R LAE+G +P +D ASVSRLA ++ + HL+ R+ E RD+ +GGY+ Sbjct: 334 LSRKLAEQGHFPAIDINASVSRLAMHIATSSSIEQSQIFRHLLSRYNEVRDLLPLGGYQA 393 Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420 G D +D AV P + FL+Q+ Sbjct: 394 GQDPEMDLAVRVYPEMARFLRQT 416 >gi|114319873|ref|YP_741556.1| flagellar protein export ATPase FliI [Alkalilimnicola ehrlichii MLHE-1] gi|114226267|gb|ABI56066.1| flagellar protein export ATPase FliI [Alkalilimnicola ehrlichii MLHE-1] Length = 458 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 150/386 (38%), Positives = 224/386 (58%), Gaps = 6/386 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKP 112 ++ D +V+ D +Y+ P G + + +V G GRV++ G+P Sbjct: 62 QDRDVEAEVVGFAGDKLYLMPTGELHGMMPNARVVPRGGTAEAGMGPGLLGRVLDGGGRP 121 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG L + + + P + R ++ G+R I+ + GQR+G+FAGSG+ Sbjct: 122 LDGKGLLDHSEYRSLVGEGINP-LARAPIKAPLDVGVRAINSLFTVGRGQRMGLFAGSGV 180 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILR 231 GKS LL M R D V++ L+GERGREV+EFI D LGD L +SVVV + +D+SP++R Sbjct: 181 GKSVLLGMMTRYTNADVVVVGLIGERGREVKEFITDILGDEGLARSVVVASPADKSPLMR 240 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 + A +IAEYF +G NVLL++DS+TR+A + REI GE P +GYP SVF+ LP Sbjct: 241 LHGAMLATSIAEYFRDQGLNVLLLMDSLTRYAQAQREIGLAIGEPPTTKGYPPSVFALLP 300 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RL+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R LA+ G YP + Sbjct: 301 RLVERAGNGPDDGGSITAFYTVLTEGDDQQDPIADAARAILDGHLVLSRQLADAGHYPAI 360 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D ASVSR ++L L + E +D+ +G Y+ G D +D+A+ +P Sbjct: 361 DIEASVSRAMINITERGHQRLAQRFRQLWSTYRENQDLISVGAYQKGSDPRVDEAIAIMP 420 Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437 + FL+Q D+S+ F E ++L Sbjct: 421 RLRAFLQQ---DVSTAVNFGESLEQL 443 >gi|157376195|ref|YP_001474795.1| flagellum-specific ATP synthase [Shewanella sediminis HAW-EB3] gi|157318569|gb|ABV37667.1| flagellar protein export ATPase FliI [Shewanella sediminis HAW-EB3] Length = 446 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 149/372 (40%), Positives = 227/372 (61%), Gaps = 3/372 (0%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117 + +VI + +++Y+ P+ + G V G + ++ GRV++ G P+DG Sbjct: 61 VAEVIGFDGELLYLMPIEELRGVLPGAKVTPLGEQTGLNVGMSLLGRVLDGSGHPLDGLG 120 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + + S+V ++R+ + + G+R I+ + GQR+G+FAGSG+GKS L Sbjct: 121 RL-QTEQRAPRHSQVINPLSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M R D +++ LVGERGREV+EFIE+ LG+ + +SVVV A +D SP++R A Sbjct: 180 LGMMTRGTTADVIVVGLVGERGREVKEFIEEILGEEGRARSVVVAAPADTSPLMRLRACE 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LP+L+ER Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLA+ G YP +D AS Sbjct: 300 AGNGGPGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLADSGHYPAIDIEAS 359 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+A S + + + + + F++ +D+ IG Y G D +D A+ P + F Sbjct: 360 ISRVAPMVISPEHLESMRCVKQVYSLFQQNKDLISIGAYTQGSDPRIDNAIRLQPAMNAF 419 Query: 417 LKQSPSDLSSED 428 L+Q+ + S D Sbjct: 420 LRQTMKEALSFD 431 >gi|56460305|ref|YP_155586.1| flagellum-specific ATP synthase [Idiomarina loihiensis L2TR] gi|56179315|gb|AAV82037.1| type III secretory pathway ATPase [Idiomarina loihiensis L2TR] Length = 449 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 157/427 (36%), Positives = 240/427 (56%), Gaps = 8/427 (1%) Query: 5 LETLAQLAEDYSKNLVVQGGYISSITSVYY-TVTCLSQYVCLGDFVVHQGKNSDNLGQVI 63 ++ L + E K V GY++ + + + V C + +G V + + D +V+ Sbjct: 8 VKQLRKKRERIQKPSVAVSGYLTRVVGLMFEAVGCRA---PVGSSVAVEADSGDIEAEVV 64 Query: 64 RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKG 122 +I Y+ P + G V R P GRVI+A G+P+D + Sbjct: 65 GFEGNISYLMPTEDAHGVIPGARVRPLNRKNQLPLGMELLGRVIDARGEPLDDKGPIFSD 124 Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 + SK +NR++V++ G+ I+ + GQR+G+FAGSG+GKS LL M Sbjct: 125 GKTYR--SKPMNPLNRRQVKQPLDVGVTAINACLTVGQGQRMGLFAGSGVGKSVLLGMMT 182 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241 R D +++ L+GERGREV+EFIE+ LG+ +K+VV+ A +D+SP++R TA + Sbjct: 183 RGTTADVIVVGLIGERGREVKEFIEEILGEEGREKAVVIAAPADQSPLIRLRGCETASQV 242 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AEYF +G NVLL++DS+TR+A + REIA GE P +GYP SVF++LP L+ER G Sbjct: 243 AEYFRDQGLNVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGG 302 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 +G++TA +VL +GD+ DPIADS R+ILDGHIVLNR LA+ G YP +D AS+SR+ Sbjct: 303 DGQGSVTAFYTVLTEGDDLQDPIADSARAILDGHIVLNRELADSGHYPAIDIEASISRVM 362 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421 + S + + + + RD+ IG Y G D +D+A+ P + FL+Q Sbjct: 363 PQVVSEEHMQQAIKVRQWYSSYRRNRDLISIGAYTRGSDPAIDQAIAMQPRVSMFLQQKM 422 Query: 422 SDLSSED 428 ++ + D Sbjct: 423 REVVNYD 429 >gi|16082728|ref|NP_395174.1| type III secretion system ATPase [Yersinia pestis CO92] gi|28373029|ref|NP_783675.1| type III secretion system ATPase [Yersinia enterocolitica] gi|31795281|ref|NP_857742.1| type III secretion system ATPase [Yersinia pestis KIM] gi|31795483|ref|NP_857937.1| type III secretion system ATPase [Yersinia pestis KIM] gi|32470288|ref|NP_863523.1| type III secretion system ATPase [Yersinia enterocolitica] gi|45478544|ref|NP_995371.1| type III secretion system ATPase [Yersinia pestis biovar Microtus str. 91001] gi|51593909|ref|YP_068476.1| type III secretion system ATPase [Yersinia pseudotuberculosis IP 32953] gi|108793664|ref|YP_636814.1| type III secretion system ATPase [Yersinia pestis Antiqua] gi|122815812|ref|YP_001004078.1| type III secretion system ATPase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|149192699|ref|YP_001293931.1| type III secretion system ATPase [Yersinia pestis CA88-4125] gi|162417750|ref|YP_001604472.1| type III secretion system ATPase [Yersinia pestis Angola] gi|165927829|ref|ZP_02223661.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Orientalis str. F1991016] gi|165940068|ref|ZP_02228602.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Orientalis str. IP275] gi|166011707|ref|ZP_02232605.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Antiqua str. E1979001] gi|166214459|ref|ZP_02240494.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Antiqua str. B42003004] gi|167401924|ref|ZP_02307410.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422384|ref|ZP_02314137.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167422395|ref|ZP_02314148.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167422904|ref|ZP_02314657.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426875|ref|ZP_02318628.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186897574|ref|YP_001874685.1| type III secretion system ATPase [Yersinia pseudotuberculosis PB1/+] gi|229896856|ref|ZP_04512016.1| ATPase for protein unfolding and Type III secretion [Yersinia pestis Pestoides A] gi|229900211|ref|ZP_04515347.1| ATPase for protein unfolding and Type III secretion [Yersinia pestis biovar Orientalis str. India 195] gi|55977793|sp|P40291|YSCN_YERPS RecName: Full=Probable ATP synthase YscN; AltName: Full=Yop proteins secretion ATPase gi|14579346|gb|AAK69223.1|AF336309_18 YscN [Yersinia enterocolitica] gi|2996241|gb|AAC62564.1| Yops secretion ATPase YscN homolog [Yersinia pestis KIM 10] gi|3822071|gb|AAC69791.1| Yops secretion protein [Yersinia pestis KIM 10] gi|5832460|emb|CAB54917.1| putative Yops secretion ATP synthase [Yersinia pestis CO92] gi|23630601|gb|AAN37557.1| YscN [Yersinia enterocolitica] gi|45357166|gb|AAS58562.1| putative Yops secretion ATP synthase YscN [Yersinia pestis biovar Microtus str. 91001] gi|51591606|emb|CAF25410.1| putative Yops secretion ATP synthase [Yersinia pseudotuberculosis IP 32953] gi|108782211|gb|ABG16266.1| type III secretion system ATPase, FliI/YscN [Yersinia pestis Antiqua] gi|121663686|emb|CAL10048.1| probable type III secretion system ATP synthase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|148872357|gb|ABR14847.1| ATPase for protein unfolding and Type III secretion [Yersinia pestis CA88-4125] gi|162354770|gb|ABX88717.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis Angola] gi|165911978|gb|EDR30621.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Orientalis str. IP275] gi|165920265|gb|EDR37566.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Orientalis str. F1991016] gi|165989314|gb|EDR41615.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Antiqua str. E1979001] gi|166204352|gb|EDR48832.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Antiqua str. B42003004] gi|166958194|gb|EDR55215.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Orientalis str. MG05-1020] gi|166958621|gb|EDR55642.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Orientalis str. MG05-1020] gi|166958632|gb|EDR55653.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048652|gb|EDR60060.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054174|gb|EDR64001.1| type III secretion apparatus H+-transporting two-sector ATPase YscN [Yersinia pestis biovar Mediaevalis str. K1973002] gi|186700600|gb|ACC91228.1| type III secretion apparatus H+-transporting two-sector ATPase [Yersinia pseudotuberculosis PB1/+] gi|229686731|gb|EEO78811.1| ATPase for protein unfolding and Type III secretion [Yersinia pestis biovar Orientalis str. India 195] gi|229700127|gb|EEO88166.1| ATPase for protein unfolding and Type III secretion [Yersinia pestis Pestoides A] gi|310923231|emb|CBW54697.1| YscN, T3SS ATPase, PMID 17050689 [Yersinia enterocolitica (type O:8)] Length = 439 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 146/324 (45%), Positives = 202/324 (62%), Gaps = 4/324 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V++ LG+P DG L + + P M+R+ + GIRVID GQ Sbjct: 105 GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 163 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FA +G GKSTLL+ RS D +++L+GERGREVREFIE LG+ L+K+V+VV Sbjct: 164 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGREVREFIESDLGEEGLRKAVLVV 223 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD + R A A +IAEYF +G VLL++DS+TRFA + REI +GE P RG Sbjct: 224 ATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 283 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LPRL+ER G S K G+ITA+ +VLV+GD+ +P+AD RSILDGHI+L+R Sbjct: 284 YPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 341 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA YP +D L S SR+ ++ S + K L L+ ++EE + IG Y+ G D Sbjct: 342 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGDLRRLLAKYEEVELLLQIGEYQKGQDK 401 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425 D+A+ ++ I +L Q +LS Sbjct: 402 EADQAIERMGAIRGWLCQGTHELS 425 >gi|168240928|ref|ZP_02665860.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194450969|ref|YP_002045418.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|200391071|ref|ZP_03217682.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|194409273|gb|ACF69492.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|199603516|gb|EDZ02062.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205339235|gb|EDZ25999.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] Length = 433 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPEVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|30250026|ref|NP_842096.1| flagellar ATP synthase [Nitrosomonas europaea ATCC 19718] gi|30139133|emb|CAD85997.1| Flagellar ATP synthase [Nitrosomonas europaea ATCC 19718] Length = 478 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 146/344 (42%), Positives = 208/344 (60%), Gaps = 5/344 (1%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 IS GRV+N G P+D L G S+ + S+ + R +EK G+R I+ Sbjct: 134 ISVGPELLGRVLNGSGDPLDRYGPLHCGH-SVPLYSRPFNPLERAPIEKTLDVGVRAINT 192 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + Sbjct: 193 LLSVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVQEFIEHILGPEG 252 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L +SVVV A +D SP++R A IAEYF +G +VLLI+DS+TR A + REI+ Sbjct: 253 LARSVVVAAPADTSPLMRLHGAAYATAIAEYFRDEGKHVLLIMDSLTRVAMAQREISLAI 312 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF+ LP+L+ER G + G+ITA +VL + D+ NDPIAD+ R+ILD Sbjct: 313 GEPPATKGYPPSVFARLPQLVERAGNGRRGSGSITAFYTVLTENDDPNDPIADNARAILD 372 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR+ + ++ L R++ + D+ +G Sbjct: 373 GHIVLSRRLAEAGHYPAIDIEASISRVMASLVTREQLGQAQRFKALYSRYQRSHDLISVG 432 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 Y G D LD+A+ P++ FL+Q + ++ + E +KL Sbjct: 433 AYASGSDPQLDRAIELYPVLESFLQQG---MFEQESYIESMEKL 473 >gi|83747851|ref|ZP_00944884.1| HrcN [Ralstonia solanacearum UW551] gi|207724591|ref|YP_002254988.1| hrp protein hrcn [Ralstonia solanacearum MolK2] gi|207739226|ref|YP_002257619.1| hrp protein hrcn [Ralstonia solanacearum IPO1609] gi|83725498|gb|EAP72643.1| HrcN [Ralstonia solanacearum UW551] gi|206589813|emb|CAQ36774.1| hrp conserved protein hrcn [Ralstonia solanacearum MolK2] gi|206592599|emb|CAQ59505.1| hrp conserved protein hrcn [Ralstonia solanacearum IPO1609] Length = 439 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 201/327 (61%), Gaps = 4/327 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG+P DG L + + + + P M R+ VE TG+RVID L GQ Sbjct: 104 GRVLDGLGRPADGGPPLDVVE-HVPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FA +G+GKSTL+ MFAR D +I L+GERGREVREFIE LG + +++SVVV Sbjct: 163 RMGIFAPAGVGKSTLMGMFARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVC 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD S + R A +AEYF +G VLL++DS+TRFA + REI +GE P RG Sbjct: 223 ATSDRSAVERAKAAHVGTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF+ELPRLLER G S G+ITA+ +VL + ++ NDP+A+ VR ILDGH++L+R Sbjct: 283 FPPSVFAELPRLLERAGMS--SAGSITALYTVLAEDESGNDPVAEEVRGILDGHLILSRD 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A RYP +D L S+SR+ + + + L+ ++ E + +G Y+ G D Sbjct: 341 IAARNRYPAIDILNSLSRVMTQVMPREHCDAAGRMRQLLAKYNEVETLLQMGEYKEGSDP 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 + D AV + FL+Q + S D Sbjct: 401 VADAAVQWNDWMEGFLRQRTDEWCSPD 427 >gi|153832446|ref|ZP_01985113.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio harveyi HY01] gi|148871241|gb|EDL70113.1| type III secretion apparatus H+-transporting two-sector ATPase [Vibrio harveyi HY01] Length = 440 Score = 265 bits (678), Expect = 8e-69, Method: Compositional matrix adjust. Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G++++ LG+P DG S + + Sbjct: 88 VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGSQST-EPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG+ + +SV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + + ++ ++EE + IG Y+ G D D A+ Q I FL+Q PS+L Sbjct: 371 ASAAHMREMLAKYEEVELLIKIGEYQHGADSRSDMAIAQGDDIRAFLRQGTHEPSEL 427 >gi|213647283|ref|ZP_03377336.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 433 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 161/384 (41%), Positives = 221/384 (57%), Gaps = 12/384 (3%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 +DG D K +M PPAM RQ + + TGIR ID GQR+G+F+ Sbjct: 109 LDGCELPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSA 163 Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228 G+GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD Sbjct: 164 PGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPA 223 Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 + R A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS Sbjct: 224 LERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFS 283 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 LPRLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G Y Sbjct: 284 ALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHY 341 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 P +D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ Sbjct: 342 PAIDVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAID 401 Query: 409 QVPIIYDFLKQSPSDLSSEDVFQE 432 P I FL+QS ++ ++ E Sbjct: 402 TYPDICTFLRQSKDEVCGPELLIE 425 >gi|254469170|ref|ZP_05082575.1| type III secretion apparatus H+-transporting two-sector ATPase [Pseudovibrio sp. JE062] gi|211961005|gb|EEA96200.1| type III secretion apparatus H+-transporting two-sector ATPase [Pseudovibrio sp. JE062] Length = 458 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 144/330 (43%), Positives = 203/330 (61%), Gaps = 3/330 (0%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++ +G IDG D + + P M RQ ++K G+R ID Sbjct: 121 LLGRVLDGMGNFIDGVDQEFVPETHYPVNQDPPDPMQRQIIDKPLPMGVRAIDGMLTTGE 180 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FA +G GKSTL++M + D +++L+GERGREVREFIE LG + +KKSVV Sbjct: 181 GQRMGIFASAGGGKSTLMAMLVKGAAVDVTVLALIGERGREVREFIEHDLGPEGMKKSVV 240 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD+S + R A A +IAEYF +G VLL++DS+TRFA + REI GE P Sbjct: 241 VVATSDKSSLERSKAAFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAVGEPPTR 300 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RG+P SVF+ LPRL+ER G + +KG+ITA +VL++GD+ N+P++D RSILDGHIVL+ Sbjct: 301 RGFPPSVFATLPRLMERAGMN--DKGSITAFYTVLMEGDDMNEPVSDETRSILDGHIVLS 358 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA YP +D L S SR+ S + +++ + L+ ++EE + IG Y+ G Sbjct: 359 RKLAAANHYPAIDILNSKSRVMTAVTSPEHREMSGKVNSLLAKYEEVELLVQIGEYQKGA 418 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 D D A+ + I +FL+Q + DV Sbjct: 419 DSEADLAIAKNKPIKEFLQQRTDEFDGFDV 448 >gi|152986739|ref|YP_001349621.1| flagellum-specific ATP synthase [Pseudomonas aeruginosa PA7] gi|150961897|gb|ABR83922.1| flagellar protein export ATPase FliI [Pseudomonas aeruginosa PA7] Length = 451 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 146/355 (41%), Positives = 213/355 (60%), Gaps = 7/355 (1%) Query: 70 VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 VY+ PVG I+ G V GR + S GRV++ G+ +DG + D Sbjct: 77 VYLMPVGSLAGIAPGARVVPLPDTGRLPMGMS--MLGRVLDGAGRALDGKGGMRAEDWVP 134 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 135 MDGPTINP-LKRHPISEPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTR 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +++ L+GERGREV+EFI++ LG+ LK+SVVV + +D++P++R A IAEYF Sbjct: 194 ADIIVVGLIGERGREVKEFIDEILGEEGLKRSVVVASPADDAPLMRLRAAQYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TR+A + REIA GE P +GYP SVF++LP+L+ER G +E G Sbjct: 254 RDKGKNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGG 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIAD+ R +LDGH VL+R LAEEG YP +D AS+SR+ + Sbjct: 314 SITAFYTVLSEGDDQQDPIADAARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVV 373 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + L R++++RD+ +G Y G D D A+ + P + FL+Q+ Sbjct: 374 EPGHLRDAQRFKQLWSRYQQSRDLISVGAYVAGGDAETDLAIARFPAMRQFLRQA 428 >gi|269105047|ref|ZP_06157742.1| Type III secretion cytoplasmic ATP synthase [Photobacterium damselae subsp. damselae CIP 102761] gi|268160682|gb|EEZ39180.1| Type III secretion cytoplasmic ATP synthase [Photobacterium damselae subsp. damselae CIP 102761] Length = 421 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G++++ LG+P DG S + + Sbjct: 69 VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGSQST-EPSAWYPVYRD 113 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 114 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 173 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG+ + +SV+VVATSD + R A A +IAEYF +G Sbjct: 174 LALIGERGREVREFIEHDLGEKGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 233 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 234 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 291 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ + Sbjct: 292 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 351 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + + ++ ++EE + IG Y+ G D D A+ Q I FL+Q PS+L Sbjct: 352 ASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTHEPSEL 408 >gi|269963174|ref|ZP_06177509.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832138|gb|EEZ86262.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 440 Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G++++ LG+P DG S + + Sbjct: 88 VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGTQS-KEPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLITCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG+ + +SV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S +KG+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQS--DKGSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + + ++ ++EE + IG Y+ G D D A+ Q I FL+Q PS+L Sbjct: 371 ASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTXEPSEL 427 >gi|51860705|gb|AAU11472.1| putative TTSS ATPase N [Photobacterium damselae subsp. piscicida] Length = 440 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 148/357 (41%), Positives = 212/357 (59%), Gaps = 21/357 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G++++ LG+P DG S + + Sbjct: 88 VSPLGKMHEVGVGDHLL--------------GKILDGLGRPFDGSQST-EPSAWYPVYRD 132 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 133 APPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVTV 192 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG+ + +SV+VVATSD + R A A +IAEYF +G Sbjct: 193 LALIGERGREVREFIEHDLGEKGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 252 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA+ Sbjct: 253 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITAL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ + Sbjct: 311 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKTHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + + ++ ++EE + IG Y+ G D D A+ Q I FL+Q PS+L Sbjct: 371 ASAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRVFLRQGTHEPSEL 427 >gi|146312178|ref|YP_001177252.1| flagellum-specific ATP synthase [Enterobacter sp. 638] gi|145319054|gb|ABP61201.1| ATPase, FliI/YscN family [Enterobacter sp. 638] Length = 456 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 152/369 (41%), Positives = 215/369 (58%), Gaps = 12/369 (3%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF---------HWGRFRISPSACWCGRVINALGK 111 +V+ N +++ P+ E I G V+ H G+ ++ GRV++ GK Sbjct: 68 EVVGFNGQRLFLMPLEEVEGILPGARVYAKNNSGDGLHSGK-QLPLGPALLGRVLDGAGK 126 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 P+DG S + I V P + R +E TG+R I+ + GQR+G+FAGSG Sbjct: 127 PLDGLPSPDTTETGALITQPVNP-LQRTAIEHVLDTGVRPINALLTVGRGQRMGLFAGSG 185 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230 +GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ A +D SP+L Sbjct: 186 VGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIAAPADVSPLL 245 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R A IAE F +G +VLLI+DS+TR+A + REIA GE P +GYP SVF++L Sbjct: 246 RMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL 305 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 P L+ER G G++TA +VL +GD+ DPIADS R+ILDGHIVL+R LAE G YP Sbjct: 306 PALVERAGNGITGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPA 365 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410 +D AS+SR + V + L+ F+ RD+ +G Y G D +LDKA+ Sbjct: 366 IDIEASISRAMTSLITEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIAVW 425 Query: 411 PIIYDFLKQ 419 P + FL+Q Sbjct: 426 PQLEAFLQQ 434 >gi|258624658|ref|ZP_05719593.1| flagellum-specific ATP synthase [Vibrio mimicus VM603] gi|258583050|gb|EEW07864.1| flagellum-specific ATP synthase [Vibrio mimicus VM603] Length = 449 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 142/368 (38%), Positives = 223/368 (60%), Gaps = 5/368 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + + Y+ P+ +G + ++ G + S W GRV+N LG+ +D Sbjct: 66 AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQISNQWLGRVVNGLGEALDDGPV 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L +G+ +S+E SK + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LNEGERVSLE--SKPINPLKRRPVDTPLDVGVRAINGLITVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236 + M ++ D +++ +GERGREVREFIE L KK++++ A +DESP++R A L Sbjct: 184 MGMITQNTDADVIVVGFIGERGREVREFIERTLTPTARKKAIIIAAPADESPLMRLRATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 + EYF KG +VLL++DS+TR+A + REIA GE P +RGYP SVFS LP+LLER Sbjct: 244 LCHRVGEYFRDKGQDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE + G++TA+ +VL +GD+ DP+ DS R+ILDG++VL+R LAE+G YP +D AS Sbjct: 304 AGNSENQDGSLTAIYTVLAEGDDQQDPVVDSARAILDGNVVLSRQLAEQGHYPAIDINAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + + +++ +GGY+PG D LD+++ P + + Sbjct: 364 LSRCMMSCTQPTHSDTANQFRQFYSNYLQVKELLPLGGYQPGQDPELDRSLALYPQLQAY 423 Query: 417 LKQSPSDL 424 L+Q+ +++ Sbjct: 424 LQQAANEV 431 >gi|331005450|ref|ZP_08328829.1| flagellum-specific ATP synthase [gamma proteobacterium IMCC1989] gi|330420726|gb|EGG95013.1| flagellum-specific ATP synthase [gamma proteobacterium IMCC1989] Length = 434 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 7/379 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSL 119 +VI IN + V + P G +S+G V GR P GRV++A G P+D D Sbjct: 55 EVIGINANKVLLMPYGHTSGVSVGSDVVATGRKVEMPVGDNMLGRVLDAFGNPLD-DQPK 113 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + K +NR +++ TG++ ID + GQR+G+FAGSG+GKSTLL Sbjct: 114 PVASAHYPLYKKPINPLNRPPIKEILHTGVKAIDSLITVGRGQRLGIFAGSGVGKSTLLG 173 Query: 180 MFARS-DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237 M A+ DC D +I+LVGERGREV +FI LG+ LKKSVV+ ATSDE+ ++R A Sbjct: 174 MIAKGLDC-DVNVIALVGERGREVSDFIYKVLGEEGLKKSVVIAATSDENALVRSHAAWG 232 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G V+L +DS+TR A + REI + GE P +GY SVFS LPRLLER Sbjct: 233 ATAIAEYFRDQGKKVILTMDSVTRLAMAQREIGLSVGEPPTTKGYTPSVFSVLPRLLERA 292 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G S K G+ITA +VLV+GD+ N+P++D VRSILDG I L+R+LA++ +P +D L S Sbjct: 293 GTS-KNGGSITAFYTVLVEGDDTNEPVSDHVRSILDGTITLSRALAQKRHFPSIDILQSN 351 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SRL + E + ++ +E R++ +G Y G + LDK + ++ I FL Sbjct: 352 SRLINDLVDQKEYLQIRQFVEMLELYERYREMVDMGIYNHGTNPKLDKVLGKLEDIQKFL 411 Query: 418 KQSPSD-LSSEDVFQEITK 435 +Q P D + E+ + ITK Sbjct: 412 QQEPKDSFTREESLKNITK 430 >gi|87119484|ref|ZP_01075381.1| flagellum-specific ATP synthase FliI [Marinomonas sp. MED121] gi|86164960|gb|EAQ66228.1| flagellum-specific ATP synthase FliI [Marinomonas sp. MED121] Length = 441 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 155/397 (39%), Positives = 225/397 (56%), Gaps = 8/397 (2%) Query: 32 VYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--- 87 V T+ + V LGD V KN +V+ ++ Y+ P IS G V Sbjct: 32 VGLTMEAVGCKVALGDRCSVQVRKNKWVESEVVGFTGNLTYLMPTEAINGISPGARVKPL 91 Query: 88 FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147 G + P GRV+N LG P+DG + K + + + + R+ + Sbjct: 92 MGEGMMMVGPE--LLGRVVNGLGYPLDGKGPI-KAKEKIGMQGDIINPLKRKPITDTLDV 148 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 GI+ I+ + GQR+G+FAGSG+GKS LL M R D I+ L+GERGREV+EFIE Sbjct: 149 GIKSINSLLTVGKGQRLGLFAGSGVGKSMLLGMMTRFTEADITIVGLIGERGREVKEFIE 208 Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 LG + L +SVV+ + +D+S ++R A IAEY+ +G NVLL++DS+TR+A + Sbjct: 209 QILGSEGLARSVVIASPADDSALMRLRAATLTTRIAEYYRDQGKNVLLLMDSLTRYAQAQ 268 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REIA + GE P +GYP SVFS++P+L+ER G + G+ITA +VL +GD+ DPIAD Sbjct: 269 REIALSVGEPPATKGYPPSVFSKIPQLVERAGNGAEGSGSITAFYTVLTEGDDQQDPIAD 328 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 + R+ILDGH VL+R LAEEG YP +D AS+SR S K + L ++++ Sbjct: 329 ASRAILDGHFVLSRRLAEEGHYPAIDIEASISRAMPHIVSDAHLKGALRVKQLYSKYQQN 388 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 +D+ +G Y G D D+A+ +P I FL+Q S+ Sbjct: 389 QDLIAVGAYVKGADPDTDQAIALMPEIKSFLQQGLSE 425 >gi|126734101|ref|ZP_01749848.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter sp. CCS2] gi|126716967|gb|EBA13831.1| H+-transporting two-sector ATPase, flagellum-specific [Roseobacter sp. CCS2] Length = 450 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 155/418 (37%), Positives = 232/418 (55%), Gaps = 3/418 (0%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 MQ+NL + A D + G I ++ C +GD + Sbjct: 1 MQENLLDQMRRAVDQLSYIHTAGRVIGVSAGTVHS-ACTQGETRVGDRATLHTAAGKRMA 59 Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLG 120 +V++++ ++ G + +S+ D V +P W GRVI+ G+P+DG L Sbjct: 60 EVVKLDQVGAHLLVDGATDGVSINDPVVFQRAPIFAPHTGWIGRVIDPDGRPLDGQPLL- 118 Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 G + ++ P + R+ + +TG+ V + PL GQR+G+FAGSG+GKSTLL+ Sbjct: 119 PGAQNGDLNRSPPSSHERRGLGARLETGLAVFNTLLPLVRGQRVGLFAGSGVGKSTLLAD 178 Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239 AR D ++I+LVGERGREV F++D LG D + ++VVV ATSD P +R+ L+A+ Sbjct: 179 LARGVQADVIVIALVGERGREVGHFVQDVLGADGMGRAVVVAATSDTGPQVRRRCALSAM 238 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 +AE F G +VLL++DS+TRF + RE+A SGE RGYP S + RL ER GP Sbjct: 239 VVAESFRDAGLHVLLLIDSVTRFCEAHRELAVASGESANLRGYPASTGPAIARLCERAGP 298 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 G+ITAV SVLV G + ++P+AD +R +LDGHIVL+R +AE GR+P VD + SVSR Sbjct: 299 GAGASGDITAVFSVLVAGSDMDEPVADMLRGVLDGHIVLDREIAERGRFPAVDVVRSVSR 358 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 A + E ++++ L+ + + + G Y G D +LD A+ P + DFL Sbjct: 359 ALPDAANEKENEIIAKARSLLGTYVRSEMMVQAGLYVSGSDPLLDAAIAAQPALEDFL 416 >gi|118581829|ref|YP_903079.1| flagellar protein export ATPase FliI [Pelobacter propionicus DSM 2379] gi|118504539|gb|ABL01022.1| type III secretion system ATPase, FliI/YscN [Pelobacter propionicus DSM 2379] Length = 439 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 152/343 (44%), Positives = 211/343 (61%), Gaps = 15/343 (4%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GRVI+ LG PID +G L +E I + M R + K GIR I+ Sbjct: 102 MLGRVIDGLGNPIDD-----RGPLHVEEEYPIYATPVNPMTRPPIRKPLDLGIRSINGLL 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLK 215 GQR+G+ AGSG+GKSTLL M AR D +I+L+GERGRE+REFIE L + LK Sbjct: 157 TCGQGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFIEKDLQEIGLK 216 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 KSVVVVATSD+ P++R A TIAEYF +G VLL++DS+TRFA ++RE+ GE Sbjct: 217 KSVVVVATSDQPPLVRMRGAYIATTIAEYFQKQGKKVLLMMDSVTRFAMAMREVGLAIGE 276 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +GY SVF+ LP+LLER G G+IT + +VLV+GD+ N+PI+D+VRSILDGH Sbjct: 277 PPTTKGYTPSVFAALPKLLERAG--NFTDGSITGLYTVLVEGDDFNEPISDAVRSILDGH 334 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL R+LA YPP+D LAS SR+ + D ++LV + + ++ D+ IG Y Sbjct: 335 IVLTRNLASRNIYPPIDILASASRVMNDVTVTDHQELVGKFKEAMATYRQSEDLINIGAY 394 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + G + +D A+ ++ + +LKQ+ D ++ QE + L+ Sbjct: 395 KSGSNPGIDYAISKMDGMTAYLKQAVRDPAN---LQESVESLK 434 >gi|262173385|ref|ZP_06041062.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451] gi|261890743|gb|EEY36730.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451] Length = 449 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 142/368 (38%), Positives = 223/368 (60%), Gaps = 5/368 (1%) Query: 60 GQVIRINLDIVYICPVG-IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 QV+ + + Y+ P+ +G + ++ G + S W GRV+N LG+ +D Sbjct: 66 AQVVGFDHTVAYLMPIRRLGGLFAGAKVIPLDGDSTVQISNQWLGRVVNGLGEALDDGPV 125 Query: 119 LGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L +G+ +S+E SK + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L Sbjct: 126 LKEGERVSLE--SKPINPLKRRPVDTPLDVGVRAINGLITVGKGQRIGLMAGSGVGKSVL 183 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPL 236 + M ++ D +++ +GERGREVREFIE L KK++++ A +DESP++R A L Sbjct: 184 MGMITQNTDADVIVVGFIGERGREVREFIERTLTPTARKKAIIIAAPADESPLMRLRATL 243 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 + EYF KG +VLL++DS+TR+A + REIA GE P +RGYP SVFS LP+LLER Sbjct: 244 LCHRVGEYFRDKGQDVLLLMDSLTRYAMAQREIALALGEPPASRGYPPSVFSVLPQLLER 303 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G SE + G++TA+ +VL +GD+ DP+ DS R+ILDG++VL+R LAE+G YP +D AS Sbjct: 304 AGNSENQDGSLTAIYTVLAEGDDQQDPVVDSARAILDGNVVLSRQLAEQGHYPAIDINAS 363 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + + +++ +GGY+PG D LD+++ P + + Sbjct: 364 LSRCMMSCTQPTHSDTANQFRQFYSNYLQVKELLPLGGYQPGQDPELDRSLALYPQLQAY 423 Query: 417 LKQSPSDL 424 L+Q+ +++ Sbjct: 424 LQQAANEV 431 >gi|322615101|gb|EFY12024.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619942|gb|EFY16815.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622254|gb|EFY19099.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627776|gb|EFY24566.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632879|gb|EFY29623.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636630|gb|EFY33333.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641177|gb|EFY37819.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644888|gb|EFY41421.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650276|gb|EFY46690.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655849|gb|EFY52151.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660175|gb|EFY56414.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665259|gb|EFY61447.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669516|gb|EFY65664.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673442|gb|EFY69544.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677370|gb|EFY73434.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679967|gb|EFY76006.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687439|gb|EFY83411.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323194108|gb|EFZ79307.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198589|gb|EFZ83690.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202915|gb|EFZ87950.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208635|gb|EFZ93573.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211171|gb|EFZ96018.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217612|gb|EGA02327.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323218961|gb|EGA03471.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323229414|gb|EGA13537.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232637|gb|EGA16733.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240325|gb|EGA24369.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242686|gb|EGA26707.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323245897|gb|EGA29885.1| type III secretion system ATPase SsaN [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252461|gb|EGA36308.1| type III secretion system ATPase SsaN [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323260043|gb|EGA43668.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267193|gb|EGA50678.1| type III secretion system ATPase SsaN [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] Length = 433 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVTALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|303248343|ref|ZP_07334604.1| flagellar protein export ATPase FliI [Desulfovibrio fructosovorans JJ] gi|302490251|gb|EFL50165.1| flagellar protein export ATPase FliI [Desulfovibrio fructosovorans JJ] Length = 441 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 207/321 (64%), Gaps = 4/321 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 + GRVI+A G PID ++ + + I + P M+R R+ + G+R I+ L Sbjct: 105 YLGRVIDAFGNPIDDGAAITPANFN-PIFASAPMPMDRPRINEPMDVGVRAINGLLTLGK 163 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+ AGSG+GKSTL+ M AR+ D +I LVGERGRE+REFIE LG + + +SVV Sbjct: 164 GQRVGIMAGSGVGKSTLMGMIARNTKADINVIGLVGERGRELREFIEKDLGPEGMARSVV 223 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD+SP++R A A +AE+F +G +V+L++DS+TRFA + RE+ +GE P Sbjct: 224 VVATSDQSPLIRMRAAYAATAMAEFFRDQGGDVILMMDSVTRFAMAGREVGLAAGEPPTT 283 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGY SVF++LP+LLER G + +G+IT + +VLVDGD+ N+PIAD+VRSILDGHIVL Sbjct: 284 RGYTPSVFAQLPKLLERAG--KNNQGSITGIYTVLVDGDDFNEPIADAVRSILDGHIVLT 341 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA++G +P +D L S+SRL + + L+ + D+ IG Y G Sbjct: 342 RDLADQGHFPAIDVLKSISRLRSDVTPKEALTAGREMIRLLATYRRVEDMVNIGAYARGA 401 Query: 400 DLILDKAVHQVPIIYDFLKQS 420 + +D+A+ + I FL+Q+ Sbjct: 402 NPEIDRAIDMIGPINGFLRQA 422 >gi|145301459|ref|YP_001144298.1| type III secretion system ATPase [Aeromonas salmonicida subsp. salmonicida A449] gi|38201225|emb|CAD56760.1| ascN protein [Aeromonas salmonicida subsp. salmonicida] gi|66947962|emb|CAE83099.1| AscN protein [Aeromonas salmonicida subsp. salmonicida] gi|142856341|gb|ABO92550.1| AscN protein [Aeromonas salmonicida subsp. salmonicida A449] gi|145284342|gb|ABP51923.1| AscN [Aeromonas veronii bv. sobria] Length = 445 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 158/408 (38%), Positives = 232/408 (56%), Gaps = 20/408 (4%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE 79 VV G I + + LS + F HQ + LG++ I+ + + P G Sbjct: 44 VVPGVRIGELCHLRNPDNTLSLQAEVIGFAQHQALLTP-LGEMFGISSN-TEVSPTGAMH 101 Query: 80 EISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 ++ +G+ + G+V++ LG P G L + + + P M+R+ Sbjct: 102 QVGVGEHLL--------------GQVLDGLGNPFGGGH-LPEPEAWYPVYRDAPAPMSRK 146 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ + GIR ID GQR+G+FA +G GKSTLL+ RS D +++L+GERG Sbjct: 147 RIAEPISLGIRAIDGLLTCGEGQRMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERG 206 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVREFIE LG+ LKK+V+VVATSD + R A A +IAEYF +G VLL++DS Sbjct: 207 REVREFIEADLGEEGLKKAVLVVATSDRPAMERAKAGFVATSIAEYFRDQGKRVLLLMDS 266 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI +GE P RGYP SVF+ LPRL+ER G S +KG+ITA+ +VLV+GD Sbjct: 267 VTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQS--DKGSITALYTVLVEGD 324 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ + + L Sbjct: 325 DMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIIEPEHQAQAGRLRS 384 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + ++EE + IG Y+ G D + D+A+ ++ I +L+Q + SS Sbjct: 385 WLAKYEEVELLLQIGEYQKGQDKVADEAIARIETIRQWLRQGTHEPSS 432 >gi|124265761|ref|YP_001019765.1| flagellar biosynthesis ATPase [Methylibium petroleiphilum PM1] gi|124258536|gb|ABM93530.1| flagellar biosynthesis ATPase [Methylibium petroleiphilum PM1] Length = 487 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 201/326 (61%), Gaps = 6/326 (1%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ LG P+D LG G + E + + P AM R V + TG+R I+ + Sbjct: 150 GRVIDPLGMPLD---RLGPIGAVRNEPLVRRPINAMERDPVREPLDTGVRAINAMLTVGR 206 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219 GQRIG+FAGSG+GKS LL M A+ D +++ L+GERGREV+EFIED LG+ LK+S+V Sbjct: 207 GQRIGLFAGSGVGKSVLLGMMAKYTAADVIVVGLIGERGREVKEFIEDILGEEGLKRSIV 266 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D P+ R A IAE+F +G +VLL++DS+TR+A + REIA GE P Sbjct: 267 VAAPADSPPLTRMQGAAYATAIAEHFRDRGQHVLLLMDSLTRYAMAQREIALAIGEPPAT 326 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP S F++LP+L+ER G G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+ Sbjct: 327 KGYPPSCFAKLPQLVERSGNGLNGCGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLS 386 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LAE G YP +D S SR+ + + L L R+++ RD+ +G Y PG Sbjct: 387 RDLAESGHYPAIDIERSASRVMHNVARPEHLQAARRLRQLWSRYQKARDLIALGAYAPGH 446 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLS 425 D+ LD AV Q + L+Q D S Sbjct: 447 DVELDLAVKQHDAMRTLLQQDMHDAS 472 >gi|152980499|ref|YP_001353128.1| FliI flagellum specific ATP synthase [Janthinobacterium sp. Marseille] gi|151280576|gb|ABR88986.1| FliI flagellum specific ATP synthase [Janthinobacterium sp. Marseille] Length = 448 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 140/321 (43%), Positives = 198/321 (61%), Gaps = 4/321 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+D L + + + + P ++R + G+R I+ + Sbjct: 110 LLGRVLDGAGRPLDNLGPLNAAHAAPLNVRAANP--LSRAPITDVLDVGVRAINSMLTVG 167 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SV Sbjct: 168 RGQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGAEGLARSV 227 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D P++R A IAE+F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 228 VVAAPADTPPLMRLQGAAYATAIAEHFRDEGKDVLLIMDSLTRYAMAQREIALAIGEPPA 287 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G ++ G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 288 TKGYPPSVFAKLPALVERAGNGKEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 347 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 NRSLAE G YP +D S+SR + + +K L L R++ RD+ +G Y G Sbjct: 348 NRSLAEAGHYPAIDIEQSISRAMHNITTPEHQKQTRKLKQLTSRYQRNRDLISVGAYSAG 407 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LD+A+ I FL+Q Sbjct: 408 SDPVLDEAIALNSKIESFLQQ 428 >gi|17548614|ref|NP_521954.1| flagellum-specific ATP synthase [Ralstonia solanacearum GMI1000] gi|17430862|emb|CAD17544.1| probable flagellum-specific atp synthase protein [Ralstonia solanacearum GMI1000] Length = 481 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 142/325 (43%), Positives = 201/325 (61%), Gaps = 9/325 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLC 159 GRV++A G+P+DG LG + + S P +N R+ +E+ G+R I+ + Sbjct: 138 GRVVDANGEPLDGKGPLGASE-ELAWGSLAPAPLNPLKRKPIERVLDVGVRAINGLLTVG 196 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218 GQR+G+FAGSG+GKS LL M AR D V++ L+GERGREV+EFI++ LGD L +S Sbjct: 197 QGQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSA 256 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP++R A TIAEYF +G NVLLI+DS+TR+A + REIA GE P Sbjct: 257 VVAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPA 316 Query: 279 ARGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +GYP S F++LP L+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDG Sbjct: 317 TKGYPPSAFAKLPALVERAGNGMVDAAGRGGSITAFYTVLAEGDDQQDPIADAARAILDG 376 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 H VL+R LAE+G YP +D S+SR+ ++ L R++ RD+ +G Sbjct: 377 HFVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDAARRFKQLYARYQRNRDLIAVGA 436 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D + D+A+ + P + FL+Q Sbjct: 437 YARGSDPVTDQAIARYPSMEGFLQQ 461 >gi|213583910|ref|ZP_03365736.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 432 Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 161/384 (41%), Positives = 221/384 (57%), Gaps = 12/384 (3%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 +DG D K +M PPAM RQ + + TGIR ID GQR+G+F+ Sbjct: 109 LDGCELPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSA 163 Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228 G+GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD Sbjct: 164 PGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPA 223 Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 + R A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS Sbjct: 224 LERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFS 283 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 LPRLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G Y Sbjct: 284 ALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHY 341 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 P +D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ Sbjct: 342 PAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAID 401 Query: 409 QVPIIYDFLKQSPSDLSSEDVFQE 432 P I FL+QS ++ ++ E Sbjct: 402 TYPDICTFLRQSKDEVCGPELLIE 425 >gi|168233610|ref|ZP_02658668.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194471045|ref|ZP_03077029.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|238913182|ref|ZP_04657019.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|194457409|gb|EDX46248.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205332335|gb|EDZ19099.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 433 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 220/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAIDTYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|269967823|ref|ZP_06181867.1| type III secretion system ATPase [Vibrio alginolyticus 40B] gi|269827528|gb|EEZ81818.1| type III secretion system ATPase [Vibrio alginolyticus 40B] Length = 458 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 148/358 (41%), Positives = 209/358 (58%), Gaps = 18/358 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P+G E+ +GD + G ++ LG+P DG S + + Sbjct: 106 VSPMGKMHEVGVGDHLL--------------GTTLDGLGRPFDGTQS-QEPSAWYPVYRD 150 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D + Sbjct: 151 APPPMQRKLIEKPISLGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSAEVDVTV 210 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREFIE LG+ + KSV+VVATSD + R A A +IAEYF +G Sbjct: 211 LALIGERGREVREFIEHDLGEEGMAKSVLVVATSDRPAMERAKAAFVATSIAEYFRDQGK 270 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S +KG+ITA+ Sbjct: 271 RVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQS--DKGSITAL 328 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ D + Sbjct: 329 YTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVEPDHQ 388 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + + ++ ++EE + IG Y+ G D D A+ Q I FL+Q + D Sbjct: 389 ASAAHIREMLAKYEEVELLIKIGEYQHGADSRADMAIAQSDDICAFLRQGTQGIGDLD 446 >gi|283785711|ref|YP_003365576.1| flagellum-specific ATP synthase [Citrobacter rodentium ICC168] gi|282949165|emb|CBG88773.1| flagellum-specific ATP synthase [Citrobacter rodentium ICC168] Length = 456 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 154/369 (41%), Positives = 213/369 (57%), Gaps = 12/369 (3%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF---------HWGRFRISPSACWCGRVINALGK 111 +V+ N +++ P+ E I G V+ H G+ ++ GRV++ GK Sbjct: 68 EVVGFNGQRLFLMPLEEVEGILPGARVYAKNIASEGLHSGK-QLPLGPALLGRVLDGSGK 126 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 P+DG S + I P + R +E TG+R I+ + GQR+G+FAGSG Sbjct: 127 PLDGLPSPDTTETGALITQPFNP-LQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSG 185 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPIL 230 +GKS LL M AR D +++ L+GERGREV++FIE+ LG D +SVV+ A +D SP+L Sbjct: 186 VGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGADGRARSVVIAAPADVSPLL 245 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R A IAE F +G +VLLI+DS+TR+A + REIA GE P +GYP SVF++L Sbjct: 246 RMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKL 305 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 P L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R LAE G YP Sbjct: 306 PALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPA 365 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410 +D AS+SR S V L+ F+ RD+ +G Y G D +LDKA+ Sbjct: 366 IDIEASISRAMTALISEQHYAKVRQFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALW 425 Query: 411 PIIYDFLKQ 419 P + FL+Q Sbjct: 426 PQLEAFLQQ 434 >gi|254519419|ref|ZP_05131475.1| flagellar protein export ATPase FliI [Clostridium sp. 7_2_43FAA] gi|226913168|gb|EEH98369.1| flagellar protein export ATPase FliI [Clostridium sp. 7_2_43FAA] Length = 436 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 154/361 (42%), Positives = 220/361 (60%), Gaps = 6/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ D V + P+G IS G V R + S G++++ LG P+ GD+ + Sbjct: 59 EVVGFREDAVLLMPLGELIGISPGCRVVPERRPLEVRCSDDLLGKILDGLGNPLQGDEII 118 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 +E ++ P + R+R+ + TG+R ID F + GQRIG+FAGSG+GKST L Sbjct: 119 QGEGYPLE--NQPPDPLTRRRITEILPTGVRAIDGFLTVGEGQRIGIFAGSGVGKSTTLG 176 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M AR D +ISL+GERGREV EFIE LG + +KKS+VV ATSD+ ++R LTA Sbjct: 177 MIAREAEADINVISLIGERGREVLEFIEKDLGPEGMKKSIVVCATSDKPALIRIKGALTA 236 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF KG V+L++DS+TRFA + RE+ GE P +GY SVF++LP+L+ER Sbjct: 237 TAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPAQKGYTPSVFAKLPKLMER-- 294 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P +KG+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA + YP +D L S+S Sbjct: 295 PGTSDKGSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRDLAHKNHYPAIDILNSIS 354 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RL + K+ S L+ +++ D+ +G Y G + +D ++ + +LK Sbjct: 355 RLMPSIATDIHKEASSMGRDLLATYKDAEDLINLGAYVKGSNKKIDLSIQYNDRLNSYLK 414 Query: 419 Q 419 Q Sbjct: 415 Q 415 >gi|257866381|ref|ZP_05646034.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC30] gi|257873103|ref|ZP_05652756.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC10] gi|257875994|ref|ZP_05655647.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC20] gi|257800339|gb|EEV29367.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC30] gi|257807267|gb|EEV36089.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC10] gi|257810160|gb|EEV38980.1| flagellum-specific ATP synthase [Enterococcus casseliflavus EC20] Length = 450 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 158/398 (39%), Positives = 228/398 (57%), Gaps = 5/398 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G +S + + V L+ ++ V Q K L +V+ V + P+ E I Sbjct: 24 GKVSEVVGLLIKVEGLAVFIGEICEVALQNKTHTALAEVVGFVKKTVLLMPLDQLEGIGP 83 Query: 84 GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G LV G+ + G ++ LG+P+D L + P RQ++ Sbjct: 84 GCLVRPTGKSLTVKIDDTLLGHTLDGLGRPLDMALELESAP-EYPVSQDSPDPFRRQKIA 142 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + TG+R ID + GQRIG+FAGSG+GKSTLL M AR D ++I L+GERGREV Sbjct: 143 EIMPTGVRAIDGLLTVGLGQRIGIFAGSGVGKSTLLGMLARYCEADVIVIGLIGERGREV 202 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 +EFIE+ LG + +KSVVV ATSD P++R A IAEY+ +G V+L++DS+TR Sbjct: 203 KEFIENDLGPEGYRKSVVVCATSDMPPLVRLKGAHVATAIAEYYRDQGKKVVLMMDSVTR 262 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + REI ++GE P +GY SVF+ LP+LLER G S +KG+ITA +VLV+GD+ N Sbjct: 263 FAMAQREIGLSTGEPPTTKGYTPSVFTALPKLLERSGMS--DKGSITAFYTVLVEGDDMN 320 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD+VR ILDGHI+L+R +A + YP +D S+SRL S ++ K L + Sbjct: 321 EPIADAVRGILDGHILLSRKIAAQNHYPAIDIQNSLSRLMKTLVSEEQHKHAGELKENMA 380 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + E +D+ IG Y+ G + + D+A+ I FL+Q Sbjct: 381 VYAEAKDLIDIGAYKSGSNALTDQAIALHHPILRFLQQ 418 >gi|16760496|ref|NP_456113.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141744|ref|NP_805086.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213162226|ref|ZP_03347936.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213426019|ref|ZP_03358769.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213854188|ref|ZP_03382720.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25290469|pir||AE0697 H+-transporting two-sector ATPase (EC 3.6.3.14) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502792|emb|CAD01950.1| putative type III secretion ATP synthase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137372|gb|AAO68935.1| putative type III secretion ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 433 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 161/384 (41%), Positives = 221/384 (57%), Gaps = 12/384 (3%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 +DG D K +M PPAM RQ + + TGIR ID GQR+G+F+ Sbjct: 109 LDGCELPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSA 163 Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228 G+GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD Sbjct: 164 PGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPA 223 Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 + R A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS Sbjct: 224 LERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFS 283 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 LPRLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G Y Sbjct: 284 ALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHY 341 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 P +D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ Sbjct: 342 PAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAID 401 Query: 409 QVPIIYDFLKQSPSDLSSEDVFQE 432 P I FL+QS ++ ++ E Sbjct: 402 TYPDICTFLRQSKDEVCGPELLIE 425 >gi|167770215|ref|ZP_02442268.1| hypothetical protein ANACOL_01558 [Anaerotruncus colihominis DSM 17241] gi|167667537|gb|EDS11667.1| hypothetical protein ANACOL_01558 [Anaerotruncus colihominis DSM 17241] Length = 434 Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 157/387 (40%), Positives = 229/387 (59%), Gaps = 9/387 (2%) Query: 36 VTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FR 94 VTC VC + N+ L + + + + V + P I G +V G+ Sbjct: 36 VTCNIGDVC----NIQIDANNSILAEAVGLKGNSVQLMPYQDVTGIGFGSVVIPTGQSLT 91 Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + S GR ++A+G PIDG + G+ S I M+R + + GI+ ID Sbjct: 92 LRMSDELIGRTVDAMGNPIDGGPAFQSGE-SYSINGTYSNPMDRPPITDVIEIGIKAIDG 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKSTL+ M AR+ D +I+LVGERGREV EFI LG + Sbjct: 151 LLTIGKGQRMGIFAGSGVGKSTLMGMIARNIKADVNVIALVGERGREVVEFINRDLGPEG 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +K+SV+VVATSD ++R LTA IAEYF +G +VLL++DS+TRF + REI + Sbjct: 211 VKRSVLVVATSDTPAMMRSKCALTATAIAEYFRDQGKDVLLMMDSLTRFCMAQREIGLSV 270 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE PVARGY S++S LP+LLER G E G+IT + +VLV+GD+ N+PI+D+VR I+D Sbjct: 271 GEPPVARGYTPSIYSALPKLLERSG--NFEHGSITGIYTVLVEGDDTNEPISDTVRGIVD 328 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R +A + YP +D LAS+SRL + + L ++ ++E +D+ IG Sbjct: 329 GHIVLSRKVAMKNHYPAIDVLASISRLMAGIATPEHNFAAGRLRAMLSIYQENQDLISIG 388 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420 Y+ G + LD+A+ + I L+Q+ Sbjct: 389 AYKGGSNPELDEAMRHIDQINKLLQQA 415 >gi|308048755|ref|YP_003912321.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM 9799] gi|307630945|gb|ADN75247.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM 9799] Length = 446 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 148/368 (40%), Positives = 218/368 (59%), Gaps = 3/368 (0%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPI 113 N +V+ + ++Y+ PV + + G V G+ + P GRV++ G+P+ Sbjct: 57 NGQLTAEVVGFDDQVLYLMPVEELKGVLPGARVTPMGQRQGLPVGPELLGRVLDGNGEPL 116 Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 DG L + + + + P M R+ + + G+R I+ + GQR+G+FAGSG+G Sbjct: 117 DGLGPLATRERAPHHATLLNP-MARRPIHQPIDVGVRTINAMLTVGEGQRMGLFAGSGVG 175 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232 KS LL M R D +++ LVGERGREV+EFIE+ LG + +SVVV A +D SP++R Sbjct: 176 KSVLLGMMTRGTNADVIVVGLVGERGREVKEFIEEILGPEGRARSVVVAAPADTSPLMRL 235 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A TA IAE+F +G NVLL++DS+TR+A + REIA GE P +GYP SVF+ LP+ Sbjct: 236 RACETATRIAEHFRDQGRNVLLLMDSLTRYAQAQREIALAIGEPPATKGYPPSVFARLPQ 295 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R+LAE G YP +D Sbjct: 296 LVERAGNGGVGQGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRALAESGHYPAID 355 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 AS+SR+ + + L + + +D+ IG Y G D +DKA+ P Sbjct: 356 IEASISRVMPMVTEPLHLEAAQLIKQLWSAYRQNQDLIAIGAYSAGSDPQVDKAIAMQPA 415 Query: 413 IYDFLKQS 420 FL+Q+ Sbjct: 416 FNAFLRQA 423 >gi|294140206|ref|YP_003556184.1| flagellum-specific ATP synthase FliI [Shewanella violacea DSS12] gi|293326675|dbj|BAJ01406.1| flagellum-specific ATP synthase FliI [Shewanella violacea DSS12] Length = 446 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 151/371 (40%), Positives = 227/371 (61%), Gaps = 15/371 (4%) Query: 57 DNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDG 115 D + +VI + +I+Y+ P+ + G V G + ++ GRV++ G+P+D Sbjct: 59 DLVAEVIGFDDNILYLMPIEELRGVLPGAKVTPLGEQTGLNVGLSLLGRVLDGNGQPLD- 117 Query: 116 DDSLGKGDLSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 +LG+ ++ K P P +N R+ + + G+R I+ + GQR+G+FAG Sbjct: 118 --NLGR----LQTDQKAPRHSPTINPLARRAITEPLDVGVRAINAMLTVGKGQRMGLFAG 171 Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESP 228 SG+GKS LL M R D +++ LVGERGREV+EFIE+ LG+ + +SVVV A +D SP Sbjct: 172 SGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEEGRARSVVVAAPADTSP 231 Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 ++R A T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF+ Sbjct: 232 LMRLRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFA 291 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +LP+L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLA+ G Y Sbjct: 292 KLPKLVERAGNGGPGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLADSGHY 351 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 P +D AS+SR+A S + + + + + F++ +D+ IG Y G D +D A+ Sbjct: 352 PAIDVEASISRVAPMVISTEHLESMRRVKQVYSLFQQNKDLISIGAYTQGSDPRIDNAIR 411 Query: 409 QVPIIYDFLKQ 419 P + FL+Q Sbjct: 412 LQPAMNAFLRQ 422 >gi|168263753|ref|ZP_02685726.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347555|gb|EDZ34186.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 433 Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 161/384 (41%), Positives = 221/384 (57%), Gaps = 12/384 (3%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 +DG D K +M PPAM RQ + + TGIR ID GQR+G+F+ Sbjct: 109 LDGRALPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSA 163 Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESP 228 G+GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD Sbjct: 164 PGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPA 223 Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 + R A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS Sbjct: 224 LERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFS 283 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 LPRLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G Y Sbjct: 284 ALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHY 341 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 P +D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ Sbjct: 342 PAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRGVDTDTDKAID 401 Query: 409 QVPIIYDFLKQSPSDLSSEDVFQE 432 P I FL+QS ++ ++ E Sbjct: 402 AYPDICTFLRQSKDEVCGPELLIE 425 >gi|78224301|ref|YP_386048.1| ATPase FliI/YscN [Geobacter metallireducens GS-15] gi|78195556|gb|ABB33323.1| type III secretion system ATPase, FliI/YscN [Geobacter metallireducens GS-15] Length = 443 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 149/354 (42%), Positives = 213/354 (60%), Gaps = 5/354 (1%) Query: 72 ICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 + P+G + LG L+ + + GRVI+ LG+PID L + + Sbjct: 72 LMPLGELRGVGLGSLISVKRKKSSLGVGPGLLGRVIDGLGEPIDDKGPLATREEYPIYAN 131 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 V P M R+ + + GIR I+ GQR+G+ AGSG+GKSTLL M AR D Sbjct: 132 PVNP-MKRRPIREPLDLGIRAINGLLTCGKGQRVGIMAGSGVGKSTLLGMIARYTEADVN 190 Query: 191 IISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I+L+GERGRE+REFIE D + LKKSVVVVATSD+ P++R A TIAEYF ++G Sbjct: 191 VIALIGERGRELREFIEKDLQEEGLKKSVVVVATSDQPPLVRMRGAYIATTIAEYFQAQG 250 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VLL++DS TRFA ++RE+ GE P +GY SVF+ LP+LLER G G+IT Sbjct: 251 KKVLLMMDSATRFAMAMREVGLAIGEPPTTKGYTPSVFAALPKLLERTG--NFMDGSITG 308 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLV+GD+ N+P++D++RSILDGHIVLNR LA YPP+D LAS SR+ + Sbjct: 309 LYTVLVEGDDFNEPVSDAMRSILDGHIVLNRELAARAIYPPIDVLASASRVMMDVTERGQ 368 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 ++ S L+ ++ D+ IG Y+PG + +D A+ ++ + +++Q D Sbjct: 369 QQFASRFKELLAAHKQAEDLINIGAYKPGSNPTIDYAISKMEGMVGYIRQGIHD 422 >gi|261419422|ref|YP_003253104.1| flagellum-specific ATP synthase [Geobacillus sp. Y412MC61] gi|319766237|ref|YP_004131738.1| ATPase, FliI/YscN family [Geobacillus sp. Y412MC52] gi|261375879|gb|ACX78622.1| flagellar protein export ATPase FliI [Geobacillus sp. Y412MC61] gi|317111103|gb|ADU93595.1| ATPase, FliI/YscN family [Geobacillus sp. Y412MC52] Length = 422 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 152/363 (41%), Positives = 215/363 (59%), Gaps = 5/363 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ + V + P I+ G LV GR + G V++ LG+P+DG Sbjct: 42 AEVVGFHEQHVLLMPFSATTHIAPGCLVEATGRPLEVHVGDALIGMVLDPLGQPLDGS-P 100 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L G + + P + R + + + GIRVID + GQR+G+FAGSG+GKSTL+ Sbjct: 101 LPPGLKPVSVERDPPNPLVRPPIVEPLEVGIRVIDSLLAVGKGQRVGIFAGSGVGKSTLM 160 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 M AR D +I+L+GERGREVREF+E LG D L +SVVVVATSD+ ++R T Sbjct: 161 GMIARHTSADVNVIALIGERGREVREFLERDLGPDGLARSVVVVATSDQPALMRVKGAYT 220 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G +V+L++DS+TR A + REI GE P +GY SVF+ LP+LLER Sbjct: 221 ATAIAEYFRDQGADVMLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERA 280 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G G ITA +VLVDGD+ N+PIAD+VR ILDGH VL R LA +G YP ++ L SV Sbjct: 281 G--TNASGTITAFYTVLVDGDDMNEPIADAVRGILDGHFVLERQLANKGHYPAINVLKSV 338 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ SA+ ++ + L+ + ++ D+ IG Y+ G +D+A+ P + F Sbjct: 339 SRVMPHMISAEHREAANRFRRLLSTYIDSEDLIQIGAYKRGSSQEIDEAIEFYPQMMAFC 398 Query: 418 KQS 420 +Q+ Sbjct: 399 RQN 401 >gi|220917661|ref|YP_002492965.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-1] gi|219955515|gb|ACL65899.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-1] Length = 452 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/336 (43%), Positives = 208/336 (61%), Gaps = 13/336 (3%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSM-----EIMSKVPPAMNRQRVEKGFKTG 148 RI+ GRV++A +P+DG G + M + + PPA++R+RVE+ G Sbjct: 93 RIAVGEALLGRVVDASLRPVDG------GAVPMLRQRTALHASPPPALSRRRVERAVPLG 146 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208 IR ID + GQRI V AG G+GKS LL M ARS D V++ L+GERGREVREF+E Sbjct: 147 IRAIDACLTVGEGQRIAVMAGPGVGKSVLLGMLARSATADVVVVGLIGERGREVREFVER 206 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG L ++VVVVATSD SP+ R A + A AE+F +G VLL++DS++R A + RE Sbjct: 207 DLGPGLARAVVVVATSDASPLERLRAAMAATAAAEWFRGRGRRVLLLVDSLSRVAQAQRE 266 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH-NDPIADS 327 I +GE P RGYP S F+ LPRL+ER G ++ G+ITA +VL +GD+H DPIAD+ Sbjct: 267 IGLAAGEPPTTRGYPPSAFAILPRLVERAG-NDAGPGSITAFYTVLAEGDDHAGDPIADA 325 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387 R+ LDGH+VL+R LAE G +P +D LASVSR+ + A+ + L ++ E Sbjct: 326 ARATLDGHLVLSRRLAESGHFPAIDVLASVSRVMNDIVPAEHRALAREAREVLSAHREAA 385 Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 D+ +G Y G + +D+A+ + + FL+Q P++ Sbjct: 386 DLVEVGAYAAGSNPRVDRALRCIEPLRAFLRQDPAE 421 >gi|257095341|ref|YP_003168982.1| flagellar protein export ATPase FliI [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047865|gb|ACV37053.1| flagellar protein export ATPase FliI [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 472 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 143/328 (43%), Positives = 204/328 (62%), Gaps = 5/328 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G+P+D L L + S+ M+R ++K G+R I+ + GQ Sbjct: 133 GRVLDGAGRPLDKLGPLHARSLR-PLQSRPVNPMSRAPIDKALDVGVRAINGLLCVGQGQ 191 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FAGSG+GKS LL M AR + +++ L+GERGREV+EFIE LG+ L++SVV+ Sbjct: 192 RMGLFAGSGVGKSVLLGMMARYTEAEIIVVGLIGERGREVKEFIEQILGEEGLRRSVVIA 251 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R A IAEYF +G +VLLI+DS+TR+A + REIA GE PV RG Sbjct: 252 APADVSPLMRLQGAAYATCIAEYFRDRGRHVLLIMDSLTRYAMAQREIALAIGEPPVTRG 311 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LP+L+ER G G+IT +VL +GD+ DPIAD+ R+ILDGHIVL+R+ Sbjct: 312 YPPSVFARLPQLVERAGNGADGGGSITGFYTVLAEGDDQQDPIADAARAILDGHIVLSRT 371 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G YP +D S+SR S + + + L R++ +RD+ +G Y G D Sbjct: 372 LADAGHYPAIDIEQSISRAMVNLVSPGHLEQIRNFKRLFSRYQRSRDLISVGAYAAGSDP 431 Query: 402 ILDKAVHQVPIIYDFLKQS---PSDLSS 426 LD+A+ P FL+QS P+D +S Sbjct: 432 QLDQAIAIYPRFESFLQQSLAQPADFAS 459 >gi|118588293|ref|ZP_01545702.1| flagellum-specific ATP synthase [Stappia aggregata IAM 12614] gi|118438999|gb|EAV45631.1| flagellum-specific ATP synthase [Stappia aggregata IAM 12614] Length = 281 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 129/277 (46%), Positives = 193/277 (69%), Gaps = 2/277 (0%) Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVA 222 +G+FAGSG+GKS L+SM AR+ D +I L+GERGREV+EFIED LG+ L++SVVVVA Sbjct: 1 MGIFAGSGVGKSVLMSMLARNTKCDVAVIGLIGERGREVQEFIEDDLGEAGLERSVVVVA 60 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSDES ++R+ A +T+AE+F +G NVL ++DS+TRFA + REI + GE P ++GY Sbjct: 61 TSDESVLMRRQAAYLTMTVAEHFRDEGKNVLCMMDSVTRFAMAQREIGLSIGEPPTSKGY 120 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 +VF+ELPRLLER GP ++ G+IT + +VLV+GDNHN+P+AD+VR ILDGH+V+ R + Sbjct: 121 TPTVFTELPRLLERAGPGKENSGSITGLFTVLVEGDNHNEPVADAVRGILDGHVVMERGI 180 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 AE GRYP ++ L SVSR + ++ ++ L+ + + ++ +G YR G D Sbjct: 181 AERGRYPAINVLKSVSRTMPRCVPPEQLPVLRRARQLLSTYTDMEELIRLGAYRKGSDPT 240 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 +D+A+++ +I DFL Q + +S D + ++ L+ Sbjct: 241 VDEAIYRFDMIDDFLNQGKDEATSLSDGYAQLANLLE 277 >gi|76818377|ref|YP_335581.1| type III secretion system ATPase [Burkholderia pseudomallei 1710b] gi|134282518|ref|ZP_01769222.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 305] gi|167724011|ref|ZP_02407247.1| type III secretion system ATPase [Burkholderia pseudomallei DM98] gi|237507405|ref|ZP_04520120.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei MSHR346] gi|254194270|ref|ZP_04900702.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei S13] gi|254262322|ref|ZP_04953187.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1710a] gi|14719869|gb|AAK73233.1| SctN [Burkholderia pseudomallei] gi|76582850|gb|ABA52324.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1710b] gi|134246075|gb|EBA46165.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 305] gi|169651021|gb|EDS83714.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei S13] gi|234999610|gb|EEP49034.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei MSHR346] gi|254213324|gb|EET02709.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1710a] Length = 449 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 159/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77 VV+ G + + V+ L V LG+ + + L +V+ D+ + P Sbjct: 29 VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E+IS V GR I GRVI+ LG+P+DG L L +++ P M Sbjct: 87 LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 145 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D +I+L+G Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205 Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE LG + +SVVV ATSD S + R A A IAEYF +G VLL+ Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ITA+ +VL Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ + + Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + L+ + E + IG Y+ G + + D+A+ + I F Q D ++ + Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 436 >gi|56419757|ref|YP_147075.1| flagellum-specific ATP synthase [Geobacillus kaustophilus HTA426] gi|56379599|dbj|BAD75507.1| flagellar-specific ATP synthase [Geobacillus kaustophilus HTA426] Length = 422 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 152/363 (41%), Positives = 215/363 (59%), Gaps = 5/363 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ + V + P I+ G LV GR + G V++ LG+P+DG Sbjct: 42 AEVVGFHEQHVLLMPFSAMSHIAPGCLVEATGRPLEVHVGDALIGMVLDPLGQPLDGS-P 100 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L G + + P + R + + + GIRVID + GQR+G+FAGSG+GKSTL+ Sbjct: 101 LPPGLKPVSVERDPPNPLVRPPIVEPLEVGIRVIDSLLAVGKGQRVGIFAGSGVGKSTLM 160 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 M AR D +I+L+GERGREVREF+E LG D L +SVVVVATSD+ ++R T Sbjct: 161 GMIARHTSADVNVIALIGERGREVREFLERDLGPDGLARSVVVVATSDQPALMRVKGAYT 220 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G +V+L++DS+TR A + REI GE P +GY SVF+ LP+LLER Sbjct: 221 ATAIAEYFRDQGADVMLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERA 280 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G G ITA +VLVDGD+ N+PIAD+VR ILDGH VL R LA +G YP ++ L SV Sbjct: 281 G--TNASGTITAFYTVLVDGDDMNEPIADAVRGILDGHFVLERQLANKGHYPAINVLKSV 338 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ SA+ ++ + L+ + ++ D+ IG Y+ G +D+A+ P + F Sbjct: 339 SRVMPHMISAEHREAANRFRRLLSTYIDSEDLIQIGAYKRGSSQEIDEAIEFYPQMMAFC 398 Query: 418 KQS 420 +Q+ Sbjct: 399 RQN 401 >gi|53722421|ref|YP_111406.1| type III secretion system ATPase [Burkholderia pseudomallei K96243] gi|52212835|emb|CAH38869.1| putative type III secretion associated protein [Burkholderia pseudomallei K96243] Length = 449 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 159/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77 VV+ G + + V+ L V LG+ + + L +V+ D+ + P Sbjct: 29 VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E+IS V GR I GRVI+ LG+P+DG L L +++ P M Sbjct: 87 LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 145 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D +I+L+G Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205 Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE LG + +SVVV ATSD S + R A A IAEYF +G VLL+ Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ITA+ +VL Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ + + Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + L+ + E + IG Y+ G + + D+A+ + I F Q D ++ + Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 436 >gi|317048602|ref|YP_004116250.1| flagellar protein export ATPase FliI [Pantoea sp. At-9b] gi|316950219|gb|ADU69694.1| flagellar protein export ATPase FliI [Pantoea sp. At-9b] Length = 453 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 2/326 (0%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 RV++ GKP+DG S G + I + P + R +E TG+R I+ + GQR Sbjct: 118 RVLDGSGKPLDGLPSPDTGYRAPLITAPFNP-LQRTPIEDVLDTGVRAINALLTVGRGQR 176 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVA 222 +G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE+ LG + +SVV+ A Sbjct: 177 MGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKEFIENILGAEGRARSVVIAA 236 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +GY Sbjct: 237 PADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGY 296 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R L Sbjct: 297 PPSVFAKLPALVERAGNGTHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRL 356 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 AE G YP +D AS+SR + V L+ F+ RD+ +G Y G D + Sbjct: 357 AEAGHYPAIDIEASISRAMTALIDENHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSDPM 416 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSED 428 LD+A+ P + FL+Q + S D Sbjct: 417 LDRAIKLYPQMEAFLQQGIFERSDYD 442 >gi|256370958|ref|YP_003108782.1| ATPase, FliI/YscN family [Acidimicrobium ferrooxidans DSM 10331] gi|256007542|gb|ACU53109.1| ATPase, FliI/YscN family [Acidimicrobium ferrooxidans DSM 10331] Length = 436 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 165/409 (40%), Positives = 241/409 (58%), Gaps = 10/409 (2%) Query: 21 VQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGE 79 V+ G +S I ++ V + +G+ V + G + +V+ + + P+ Sbjct: 17 VRQGRVSRIVGIHLEVEGVE--AGIGEAVRIELGGGQSLVAEVVGFEGERLVCMPLREVR 74 Query: 80 EISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMN 137 + GD R +I GRVI+A G PIDG + D+ +E+ + +P M Sbjct: 75 GVRYGDRAVALRRATQIPVGRALLGRVIDADGVPIDGQGPVEPDDVVGLELAAPMP--ME 132 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R +++ G+RV+D P GQR+GVFAG+G+GKS+LLSM R D +++LVGE Sbjct: 133 RTLIDEQLGLGVRVLDTMVPCGVGQRLGVFAGAGVGKSSLLSMVVRGADVDVRVVALVGE 192 Query: 198 RGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREVREF+E LG + + +SVVVVATSDE P++R A + A IAE+F + G VLL++ Sbjct: 193 RGREVREFLEHDLGPEGMARSVVVVATSDEPPLVRVRAAIAATRIAEWFRASGARVLLVM 252 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TR A + RE+ ++GE P RGYP SVF + +LLER G G+IT + SVLV+ Sbjct: 253 DSLTRLALAQRELGLSAGEPPSVRGYPPSVFRLMAQLLERAG--TDHVGSITGIYSVLVE 310 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 GD+ +DPIAD+ RS+LDGHIVL+R LA GRYP VD LAS+SRL D ++L+ + Sbjct: 311 GDDLDDPIADAARSVLDGHIVLSRQLANRGRYPAVDVLASLSRLESSILPDDRRRLMQAA 370 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + +E RD+ +G Y+ G + +D+A+ VP I Q S+ S Sbjct: 371 RRHLAVLDEVRDLVDLGAYQAGTSMEVDEALEVVPRIETVFGQDISERS 419 >gi|261341507|ref|ZP_05969365.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus ATCC 35316] gi|288316304|gb|EFC55242.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus ATCC 35316] Length = 439 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/385 (38%), Positives = 223/385 (57%), Gaps = 5/385 (1%) Query: 38 CLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-I 95 C+ + +G +G + + QV+ + D+ ++ P + G VF + + Sbjct: 35 CVGCRLAVGQLCQVEGGEGELIDAQVVGFDRDVTFLMPFKQPAGLMAGARVFPMDKQHGV 94 Query: 96 SPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 W GRV+N LG+PID L + + + +V P + RQ V + G+R I+ Sbjct: 95 LIGDQWLGRVVNGLGEPIDDKGKLTGDTVLPQQLPQVHP-LKRQPVAEPLDVGVRAINGL 153 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214 + GQR+G+ AGSG+GKS LL M R + V++ L+GERGREV+EFI+ LG+ Sbjct: 154 LTIGKGQRVGLMAGSGVGKSVLLGMITRYTQAEVVVVGLIGERGREVKEFIDHSLGEAGR 213 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +KSV+V A +DESP++R A TIA Y+ KG +VLL++DS+TR+A + REIA + G Sbjct: 214 RKSVIVAAPADESPLMRIKATELCHTIASYYRDKGKDVLLLVDSLTRYAMAQREIALSLG 273 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E P +GYP S F +P+L+E G SE G++TA+ +VL +GD+ DPI D R++LDG Sbjct: 274 EPPATKGYPPSAFGLIPKLVESAGNSES-LGSMTAIYTVLAEGDDQQDPIVDCARAVLDG 332 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+R LAE G YP +D S+SR + D ++ +L L ++ + + +GG Sbjct: 333 HIVLSRHLAEAGHYPAIDIGQSISRCMSQVTEQDHQRAARTLKQLYAEYQSIKPLIPLGG 392 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D + D+AV+ P I FL+Q Sbjct: 393 YVAGADPVADRAVNLSPAITRFLQQ 417 >gi|226944509|ref|YP_002799582.1| flagellum-specific ATPase [Azotobacter vinelandii DJ] gi|226719436|gb|ACO78607.1| Flagellum-specific ATPase [Azotobacter vinelandii DJ] Length = 459 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 142/321 (44%), Positives = 202/321 (62%), Gaps = 6/321 (1%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV+++ G+P+DG LG D PP ++R +++ GIR I+ + Sbjct: 120 LGRVVDSSGQPLDG---LGPLDGVHHASLHTPPLNPLHRAPIDRQIDVGIRAINGLLSVG 176 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FI++ LG + L++SV Sbjct: 177 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVQDFIDNILGAEGLRRSV 236 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP+ R A +AE F G +VLLI+DS+TR+A + REIA GE P Sbjct: 237 VVAAPADNSPLQRLQGAAYATRLAEDFRDAGRDVLLIMDSLTRYAMAQREIALAIGEPPA 296 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LPRL+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 297 TKGYPPSVFAKLPRLVERTGNGPRGGGSITAFYTVLSEGDDQQDPIADSARAILDGHIVL 356 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R+LAE G YP +D AS+SR +++ + R++ RD+ +G Y PG Sbjct: 357 SRALAESGHYPAIDIEASISRAMTAIVDDAQQRKAQQFKQSLSRYQRNRDLISVGAYAPG 416 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D LD+AV+ P + FL+Q Sbjct: 417 HDPQLDRAVNLYPQLERFLQQ 437 >gi|331007044|ref|ZP_08330276.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium IMCC1989] gi|330419146|gb|EGG93580.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium IMCC1989] Length = 459 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 148/332 (44%), Positives = 207/332 (62%), Gaps = 7/332 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GRVI+ LG+PID S+ DL S E +++ P + R + + GIR I+ P+ Sbjct: 108 GRVIDGLGQPIDDLGSIPNDDLAPIKSAE-QTRINP-LQRAPIVEVLDVGIRAINALIPV 165 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 GQR+G+FAGSG+GKS LL M R D V++ L+GERGREV+EFIE LG+ LK++ Sbjct: 166 GKGQRLGLFAGSGVGKSVLLGMMTRFTTADVVVVGLIGERGREVKEFIEHSLGEEGLKRA 225 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VVV + +DESP++R A A IAEY+ +G +VLL++DS+TR+A + REIA GE P Sbjct: 226 VVVASPADESPLMRLRASQLASQIAEYYRDQGKDVLLLMDSLTRYAQAQREIALAIGEPP 285 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP SVF++LP+L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGH+V Sbjct: 286 ATKGYPPSVFAKLPQLVERAGNGKVGSGSITAFYTVLTEGDDLQDPIADSARAILDGHVV 345 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R LAE G YP +D S+SR+ K + L+ + + RD+ IG Y Sbjct: 346 LSRQLAESGIYPAIDVEMSISRVMTSIVDKTHIKWLQRFKQLLANYYKNRDLINIGAYIK 405 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 G D +D A+ P + F++Q SD DV Sbjct: 406 GSDNEVDLALEYFPRLQQFIQQDISDAVYCDV 437 >gi|307638075|gb|ADN80525.1| Flagellum-specific ATP synthase [Helicobacter pylori 908] gi|317014791|gb|ADU82227.1| flagellum-specific ATP synthase [Helicobacter pylori Gambia94/24] gi|325996678|gb|ADZ52083.1| Flagellum-specific ATP synthase [Helicobacter pylori 2018] gi|325998269|gb|ADZ50477.1| Flagellum-specific ATP synthase [Helicobacter pylori 2017] Length = 434 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + S+ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFVEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLASIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|126442369|ref|YP_001062985.1| type III secretion system ATPase [Burkholderia pseudomallei 668] gi|167898593|ref|ZP_02485994.1| type III secretion system ATPase [Burkholderia pseudomallei 7894] gi|167906935|ref|ZP_02494140.1| type III secretion system ATPase [Burkholderia pseudomallei NCTC 13177] gi|167923128|ref|ZP_02510219.1| type III secretion system ATPase [Burkholderia pseudomallei BCC215] gi|254183794|ref|ZP_04890386.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1655] gi|254186709|ref|ZP_04893225.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei Pasteur 52237] gi|126221860|gb|ABN85365.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 668] gi|157934393|gb|EDO90063.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei Pasteur 52237] gi|184214327|gb|EDU11370.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1655] Length = 443 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 159/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77 VV+ G + + V+ L V LG+ + + L +V+ D+ + P Sbjct: 23 VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 80 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E+IS V GR I GRVI+ LG+P+DG L L +++ P M Sbjct: 81 LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 139 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D +I+L+G Sbjct: 140 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 199 Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE LG + +SVVV ATSD S + R A A IAEYF +G VLL+ Sbjct: 200 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 259 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ITA+ +VL Sbjct: 260 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 317 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ + + Sbjct: 318 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 377 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + L+ + E + IG Y+ G + + D+A+ + I F Q D ++ + Sbjct: 378 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 430 >gi|226199117|ref|ZP_03794679.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei Pakistan 9] gi|225928892|gb|EEH24917.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei Pakistan 9] Length = 443 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 159/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77 VV+ G + + V+ L V LG+ + + L +V+ D+ + P Sbjct: 23 VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 80 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E+IS V GR I GRVI+ LG+P+DG L L +++ P M Sbjct: 81 LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 139 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D +I+L+G Sbjct: 140 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 199 Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE LG + +SVVV ATSD S + R A A IAEYF +G VLL+ Sbjct: 200 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 259 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ITA+ +VL Sbjct: 260 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 317 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ + + Sbjct: 318 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 377 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + L+ + E + IG Y+ G + + D+A+ + I F Q D ++ + Sbjct: 378 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 430 >gi|198243404|ref|YP_002215717.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197937920|gb|ACH75253.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] Length = 443 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 219/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 59 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 118 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 119 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 176 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 177 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 236 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 237 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 296 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 297 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 354 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + + E + IG Y+ GVD DKA+ P Sbjct: 355 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYLEVELLIRIGEYQRGVDTDTDKAIDTYP 414 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 415 DICTFLRQSKDEVCGPELLIE 435 >gi|309779489|ref|ZP_07674250.1| flagellar protein export ATPase FliI [Ralstonia sp. 5_7_47FAA] gi|308921730|gb|EFP67366.1| flagellar protein export ATPase FliI [Ralstonia sp. 5_7_47FAA] Length = 486 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 142/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A G+P+DG LG DL+ ++ P + R+ +E G+R I+ + Sbjct: 143 GRVVDANGEPLDGKGPLGAHEDLAWGTLNPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQ 202 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D V++ L+GERGREV+EFI++ LGD L +S V Sbjct: 203 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 262 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R A TIAEYF +G NVLLI+DS+TR+A + REIA GE P Sbjct: 263 VAAPADTSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 322 Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +GYP S F++LP L+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDGH Sbjct: 323 KGYPPSAFAKLPALVERAGNGMVDANGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 382 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R LAE+G YP +D S+SR+ ++ L R++ RD+ +G Y Sbjct: 383 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDTARRFKQLYARYQRNRDLIAVGAY 442 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G D + D+A+ + P + FL+Q Sbjct: 443 ARGSDPVTDQAIARYPDMEAFLQQ 466 >gi|299068780|emb|CBJ40020.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP synthase [Ralstonia solanacearum CMR15] Length = 481 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 141/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A G+P+DG LG + L+ ++ P + R+ +E G+R I+ + Sbjct: 138 GRVVDANGEPLDGKGPLGASEELAWGTLAPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQ 197 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D V++ L+GERGREV+EFI++ LGD L +S V Sbjct: 198 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 257 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R A TIAEYF +G NVLLI+DS+TR+A + REIA GE P Sbjct: 258 VAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 317 Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +GYP S F++LP L+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDGH Sbjct: 318 KGYPPSAFAKLPALVERAGNGMVDAAGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 377 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R LAE+G YP +D S+SR+ ++ L R++ RD+ +G Y Sbjct: 378 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDAARRFKQLYARYQRNRDLIAVGAY 437 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G D + D+A+ + P + FL+Q Sbjct: 438 ARGSDPVTDQAIARYPSMEGFLQQ 461 >gi|332531126|ref|ZP_08407040.1| ATPase FliI/YscN [Hylemonella gracilis ATCC 19624] gi|332039411|gb|EGI75823.1| ATPase FliI/YscN [Hylemonella gracilis ATCC 19624] Length = 535 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 146/346 (42%), Positives = 210/346 (60%), Gaps = 12/346 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGI 149 G+ R+ GRV++A G+P+D L ++ + + P AM+R V + TG+ Sbjct: 152 GQLRLPLGEGLLGRVVDAQGQPMDHRGPLS--NVVSRPLDRSPLNAMDRAPVREPLDTGV 209 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 R I+ + GQR+G+FAG+G+GKS LL M AR + +++ LVGERGREV+EFIED Sbjct: 210 RSINALLTVGRGQRLGLFAGAGVGKSVLLGMMARYTEAEIIVVGLVGERGREVKEFIEDI 269 Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG+ ++SVVV A +D P+LR A A +AEYF +G +VLL++DS+TR+A + RE Sbjct: 270 LGEEGRRRSVVVAAPADAPPLLRLQAAGYATGVAEYFRDQGKHVLLLMDSLTRYAMAQRE 329 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 IA GE P +GYP S F++LP+L+ER G G+ITA +VL +GD+ DPIAD+ Sbjct: 330 IALAVGEPPATKGYPPSCFAKLPQLVERSGNGLNGVGSITAFYTVLAEGDDQQDPIADAA 389 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R+ILDGHIVL R+LAE G YP +D S SR+ S + +L + R+E RD Sbjct: 390 RAILDGHIVLTRALAEAGHYPAIDIAQSASRVMHNVVSKEHFELARQFRGISSRYERGRD 449 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434 + IG Y PG D LD+++ + FL+Q D++Q +T Sbjct: 450 LIQIGAYVPGADPGLDESIRLHEPMMAFLQQ--------DMYQGVT 487 >gi|315617528|gb|EFU98134.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli 3431] Length = 439 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 153/379 (40%), Positives = 218/379 (57%), Gaps = 8/379 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +VI IN D V++ P + G + + G F+I GR+++ +G+P+ + Sbjct: 60 LAEVIAINEDEVFLLPFEHVSGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNI 119 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GKSTL Sbjct: 120 DALYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237 L M D ++++L+GERGREV EF+ L K V+VV TSD + R A T Sbjct: 180 LGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFT 239 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LLER Sbjct: 240 ATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERA 299 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D S Sbjct: 300 GPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSA 357 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ ++ + + LI ++ + IG Y G D DKA+ I F+ Sbjct: 358 SRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSFI 417 Query: 418 KQSPSDLSS-----EDVFQ 431 +QS D+SS E++F+ Sbjct: 418 QQSTKDISSYEKTIENLFK 436 >gi|326623464|gb|EGE29809.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 428 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 159/381 (41%), Positives = 219/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 44 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 103 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 104 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 161 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 162 GKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 221 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 222 VRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 281 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 282 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 339 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + + E + IG Y+ GVD DKA+ P Sbjct: 340 DVLATLSRVFPVVTSHEHRQLAAILRRRLALYLEVELLIRIGEYQRGVDTDTDKAIDTYP 399 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 400 DICTFLRQSKDEVCGPELLIE 420 >gi|170767133|ref|ZP_02901586.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia albertii TW07627] gi|170124571|gb|EDS93502.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia albertii TW07627] Length = 446 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 153/379 (40%), Positives = 218/379 (57%), Gaps = 8/379 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +VI IN D V++ P + G + + G F+I GR+++ +G+P+ + Sbjct: 67 LAEVIAINEDEVFLLPFEHVSGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNI 126 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GKSTL Sbjct: 127 DALYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTL 186 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237 L M D ++++L+GERGREV EF+ L K V+VV TSD + R A T Sbjct: 187 LGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFT 246 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LLER Sbjct: 247 ATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERA 306 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D S Sbjct: 307 GPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSA 364 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ ++ + + LI ++ + IG Y G D DKA+ I F+ Sbjct: 365 SRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTVGQDPEADKAIKNRKAIQSFI 424 Query: 418 KQSPSDLSS-----EDVFQ 431 +QS D+SS E++F+ Sbjct: 425 QQSTKDISSYEKTIENLFK 443 >gi|168822285|ref|ZP_02834285.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205341351|gb|EDZ28115.1| type III secretion apparatus H+-transporting two-sector ATPase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 433 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 158/381 (41%), Positives = 219/381 (57%), Gaps = 6/381 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKP 112 K + L +V+ IN + P + G V R P GRVI+ G+P Sbjct: 49 KPGEELAEVVGINGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 +DG + + M PPAM RQ + + TGIR ID GQR+G+F+ G+ Sbjct: 109 LDGRELPDVCWKDYDAMP--PPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGV 166 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILR 231 GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V+VVATSD + R Sbjct: 167 GKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALER 226 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A TI E+F G V+L+ DS+TR+A + REIA +GE V+ YP VFS LP Sbjct: 227 VRALFVATTITEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALP 286 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LAE G YP + Sbjct: 287 RLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAI 344 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LA++SR+ S + ++L + L + ++E + IG Y+ GVD DKA+ P Sbjct: 345 DVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDAYP 404 Query: 412 IIYDFLKQSPSDLSSEDVFQE 432 I FL+QS ++ ++ E Sbjct: 405 DICTFLRQSKDEVCGPELLIE 425 >gi|197122869|ref|YP_002134820.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K] gi|196172718|gb|ACG73691.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. K] Length = 452 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 146/336 (43%), Positives = 208/336 (61%), Gaps = 13/336 (3%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSM-----EIMSKVPPAMNRQRVEKGFKTG 148 RI+ GRV++A +P+DG G + M + + PPA++R+RVE+ G Sbjct: 93 RIAVGEALLGRVVDASLRPVDG------GAVPMLRQRTALHASPPPALSRRRVERAVPLG 146 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208 IR +D + GQRI V AG G+GKS LL M ARS D V++ L+GERGREVREF+E Sbjct: 147 IRAVDACLTVGEGQRIAVMAGPGVGKSVLLGMLARSATADVVVVGLIGERGREVREFVER 206 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG L ++VVVVATSD SP+ R A + A AE+F +G VLL++DS++R A + RE Sbjct: 207 DLGPGLARAVVVVATSDASPLERLRAAMAATAAAEWFRGRGRRVLLLVDSLSRVAQAQRE 266 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH-NDPIADS 327 I +GE P RGYP S F+ LPRL+ER G ++ G+ITA +VL +GD+H DPIAD+ Sbjct: 267 IGLAAGEPPTTRGYPPSAFAILPRLVERAG-NDAGPGSITAFYTVLAEGDDHAGDPIADA 325 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387 R+ LDGH+VL+R LAE G +P +D LASVSR+ + A+ + L ++ E Sbjct: 326 ARATLDGHLVLSRRLAESGHFPAIDVLASVSRVMNDIVPAEHRALAREAREVLSAHREAA 385 Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 D+ +G Y G + +D+A+ + + FL+Q P++ Sbjct: 386 DLVEVGAYAAGSNPRVDRALRCIEPLRAFLRQDPAE 421 >gi|94264096|ref|ZP_01287895.1| ATPase FliI/YscN [delta proteobacterium MLMS-1] gi|93455512|gb|EAT05702.1| ATPase FliI/YscN [delta proteobacterium MLMS-1] Length = 437 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 143/352 (40%), Positives = 218/352 (61%), Gaps = 4/352 (1%) Query: 70 VYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G + G + G+ R++ S GR+I+ LG+P+DG L G+ + Sbjct: 66 VLLMPLGEMRGVEPGSAIRLAEGQARVTVSQALLGRIIDGLGQPMDGGPPL-PGEAFYPL 124 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 ++ M R+R+++ G+R I+ L GQRIG+ AGSG+GKSTL+ M AR D Sbjct: 125 YAEPLNPMERERIQEPVDVGVRSINGLLTLGKGQRIGIMAGSGVGKSTLMGMIARHTAAD 184 Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+L+GERGRE+++FIE LG + L +SVV+VATSD+ P++R A+ +AEYF Sbjct: 185 ISVIALIGERGRELKDFIERDLGPEGLARSVVIVATSDQPPLVRMRGAYLAMAVAEYFRD 244 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +V+L++DS+TR+A S RE+ GE P +RGY SVF +LP+LLER G + KG+I Sbjct: 245 HDRDVVLMMDSVTRYAMSSREVGLAIGEPPTSRGYTPSVFGQLPKLLERAGTCQG-KGSI 303 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T + +VLV+GD+ N+PIAD+VRSI+DGHIVL+R LA +G YP ++ SVSR SA Sbjct: 304 TGIFTVLVEGDDMNEPIADAVRSIVDGHIVLSRDLAGQGHYPAIEVSGSVSRCMSDVASA 363 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 ++ + +I + + D+ IG Y G + +D A+ + + +L+Q Sbjct: 364 EQIEAAHRFLEIISLYRRSEDLINIGAYAKGSNPKIDNAIAMIDQLNGYLRQ 415 >gi|297617141|ref|YP_003702300.1| flagellar protein export ATPase FliI [Syntrophothermus lipocalidus DSM 12680] gi|297144978|gb|ADI01735.1| flagellar protein export ATPase FliI [Syntrophothermus lipocalidus DSM 12680] Length = 447 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 147/361 (40%), Positives = 221/361 (61%), Gaps = 5/361 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + P+G + I G + G+ F++ GRV+N LG+PIDG + Sbjct: 64 EVVGFKGNKTLLMPLGELDGIGPGSEIVATGQTFKVRVGRSLVGRVLNGLGEPIDGGGPV 123 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + + +M+ P + R+R+ + G+R ID + GQR+G+ AGSG+GKSTLL Sbjct: 124 -ETETTYPVMNHPPDPLKRRRITEVLPVGVRAIDALVTVGKGQRMGILAGSGVGKSTLLG 182 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M AR+ D +I+L+GERGREVR+F+E LG + LK+SVVVVATSD+ ++R A Sbjct: 183 MIARNTEADVSVIALIGERGREVRDFLERDLGEEGLKRSVVVVATSDQPALIRLRGAFVA 242 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +IAE+F +G +VLL++DS+TRFA + REI GE P RG+ SVF+ LP+LLER G Sbjct: 243 TSIAEFFRDQGLDVLLLMDSLTRFALAQREIGLAIGEPPATRGFTPSVFALLPKLLERAG 302 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 S +KG IT + +VLV+GD+ N+PI D+VR I+DGHI L R LA +P +D L S+S Sbjct: 303 AS--DKGTITGLYAVLVEGDDMNEPITDAVRGIVDGHIALTRELASLNHFPAIDVLGSIS 360 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + S+ + L+ + E +D+ IG YR G + +D+A+ + FL+ Sbjct: 361 RVMPEIVSSSHLESAGRFRSLLAVYREAKDLVDIGAYRRGANPRIDEALELIDGCNAFLQ 420 Query: 419 Q 419 Q Sbjct: 421 Q 421 >gi|89111149|dbj|BAE80239.1| HrcN [Acidovorax avenae subsp. avenae] Length = 442 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 4/323 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI++LG+PIDG L + + + + P M R+ +E TG++ ID L GQ Sbjct: 108 GRVIDSLGQPIDGKGPLDCSE-TRPVFALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQ 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FA +G+GKSTL+ M AR D +I+L+GERGREVREF+E LG+ + +SVVV Sbjct: 167 RMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERGREVREFVEFILGEEGMARSVVVC 226 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD S R A A +AEY+ +G VLL++DS+TRFA + REI +GE P RG Sbjct: 227 ATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDSLTRFARAQREIGLAAGEPPARRG 286 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF+E+PRLLER G + G+ITA+ +VL + ++ NDPI++ VR ILDGH++L+R Sbjct: 287 FPPSVFAEIPRLLERAGMGAR--GSITALYTVLYEDESGNDPISEEVRGILDGHMILSRK 344 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A +YP +D L S+SR+ + + ++ L+ ++EE + +G Y+PG D Sbjct: 345 IAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLMAKYEEIEPLVQMGEYKPGNDP 404 Query: 402 ILDKAVHQVPIIYDFLKQSPSDL 424 + D+A+ + I FL QS SDL Sbjct: 405 LADEAMEKHEEIRAFLNQSTSDL 427 >gi|147678420|ref|YP_001212635.1| flagellar biosynthesis/type III secretory pathway ATPase [Pelotomaculum thermopropionicum SI] gi|146274517|dbj|BAF60266.1| flagellar biosynthesis/type III secretory pathway ATPase [Pelotomaculum thermopropionicum SI] Length = 446 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 158/369 (42%), Positives = 219/369 (59%), Gaps = 7/369 (1%) Query: 72 ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 + P+G + I G V GR F I GRV+N LG+P+DG +G + + + Sbjct: 73 LMPLGELKGIYQGCSVTPSGRPFTIKVGEGLLGRVLNGLGEPMDGLGPVGGRTENYPVDN 132 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 + P + R+R+ + TG+R +D GQRIG+F+GSG+GKSTLL M +R D Sbjct: 133 RPPNPLKRRRITEVLSTGVRAVDGLLTCGRGQRIGIFSGSGVGKSTLLGMVSRFSDADVN 192 Query: 191 IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +I L+GERGREV +FIE LG + L +SVVVVATS++ ++R A +AEYF +G Sbjct: 193 VIGLIGERGREVLDFIETDLGPEGLARSVVVVATSEQPALVRLKGAFVACAVAEYFRDQG 252 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VLL++DSITRFA + RE+ GE P +GY SVF+ LPRLLER G S G+ITA Sbjct: 253 RDVLLMMDSITRFAMAQREVGLAIGEPPATKGYTPSVFALLPRLLERAGMS--SAGSITA 310 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 +VLVDGD+ N+PI+D+VR ILDGHIVL+RSLA +P VD L SVSRL + + Sbjct: 311 FFTVLVDGDDLNEPISDAVRGILDGHIVLSRSLAASNHFPAVDVLNSVSRLMPDITTEEH 370 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 + L L+ + + D+ IG Y G + +D+A+ I FL+Q DL Sbjct: 371 RAWAGRLRDLLAAYRQAEDLINIGAYVAGSNPRVDEAIACYQDIVAFLRQ---DLKEHAR 427 Query: 430 FQEITKKLQ 438 F+E L+ Sbjct: 428 FEETLAMLE 436 >gi|126455566|ref|YP_001075932.1| type III secretion system ATPase [Burkholderia pseudomallei 1106a] gi|242311290|ref|ZP_04810307.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1106b] gi|254301611|ref|ZP_04969055.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 406e] gi|48479050|gb|AAT44848.1| ATP synthase [Burkholderia pseudomallei] gi|126229334|gb|ABN92747.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1106a] gi|157810751|gb|EDO87921.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 406e] gi|242134529|gb|EES20932.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 1106b] Length = 449 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 159/413 (38%), Positives = 233/413 (56%), Gaps = 9/413 (2%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77 VV+ G + + V+ L V LG+ + + L +V+ D+ + P Sbjct: 29 VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E+IS V GR I GRVI+ LG P+DG L L +++ P M Sbjct: 87 LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGAPLDGGPPLASETLQ-PLIAAPPEPM 145 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D +I+L+G Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205 Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE LG + +SVVV ATSD S + R A A IAEYF +G VLL+ Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ITA+ +VL Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ + + Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + L+ + E + IG Y+ G + + D+A+ + I F Q D ++ + Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 436 >gi|237731989|ref|ZP_04562470.1| flagellum-specific ATP synthase [Citrobacter sp. 30_2] gi|226907528|gb|EEH93446.1| flagellum-specific ATP synthase [Citrobacter sp. 30_2] Length = 456 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG + + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPAPDTTETGALITPPFNP-LQRTAIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGADGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G++TA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRHLAEAGHYPAIDIEASISRAMTALISEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + FL+Q Sbjct: 414 SDPMLDKAIALWPQLEAFLQQ 434 >gi|260598450|ref|YP_003211021.1| flagellum-specific ATP synthase [Cronobacter turicensis z3032] gi|260217627|emb|CBA31919.1| Flagellum-specific ATP synthase [Cronobacter turicensis z3032] Length = 470 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 146/334 (43%), Positives = 201/334 (60%), Gaps = 3/334 (0%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ GKP+DG S I P + R +E G+R I+ + G Sbjct: 131 LGRVLDGAGKPLDGLPSPDTETTGALITPPFNP-LQRTAIEDVLDVGVRPINALLTVGRG 189 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 190 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVI 249 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P + Sbjct: 250 AAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 309 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 310 GYPPSVFAKLPALVERAGNGITGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 369 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D AS+SR+ S + V + L+ F+ RD+ +G Y G D Sbjct: 370 RLAEAGHYPAIDIEASISRVMTAIISEEHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSD 429 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 +LD+A+ P + FL+Q + S ED Q + Sbjct: 430 PMLDRAITLWPQLEAFLQQGIYERSGVEDALQAL 463 >gi|256830795|ref|YP_003159523.1| ATPase, FliI/YscN family [Desulfomicrobium baculatum DSM 4028] gi|256579971|gb|ACU91107.1| ATPase, FliI/YscN family [Desulfomicrobium baculatum DSM 4028] Length = 448 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 156/379 (41%), Positives = 229/379 (60%), Gaps = 5/379 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119 +V+ D++ + P G I G L+ + + P + G+ ++A G+ +D + S+ Sbjct: 60 EVVGFRDDVMLLMPYGEMRGIRPGSLIRNTSTPPVFPVGNRYLGQAVDAFGQSLDPEKSI 119 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + + P + R R+ + G+R ++ L GQR+G+ AGSG+GKSTL+ Sbjct: 120 FPARYN-PLHADPPNPLTRPRITEPLDVGVRAVNGLLTLGKGQRVGIMAGSGVGKSTLMG 178 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR + +I L+GERGREV +FIE LG + L KSV++VATSD+ P++R A A Sbjct: 179 MFARYTSAEVNVIGLIGERGREVVDFIEKDLGPEGLAKSVLIVATSDQGPLVRMRAAYAA 238 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +AE+F +G +VLL++DS+TRFA + RE+ +GE P RGY +VFS LPRLLER G Sbjct: 239 TAMAEFFRDEGKDVLLMMDSVTRFAMAAREVGLAAGEPPTTRGYTPTVFSHLPRLLERAG 298 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 S K G+IT + +VLV+GD+ N+P+AD+VRSILDGHIVL R LA++G YP +D L SVS Sbjct: 299 RSSK--GSITGIYTVLVEGDDFNEPVADAVRSILDGHIVLTRDLADQGHYPSIDVLKSVS 356 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RLA A L ++ F+ D+ IG Y G + +D+A++ V I FL+ Sbjct: 357 RLAPDVTPAPVIAAGRDLIRMMATFQRVEDMVNIGAYAAGSNPEIDQALNMVHPIRAFLQ 416 Query: 419 QSPSDLSSEDVFQEITKKL 437 QS + S+ D E KKL Sbjct: 417 QSVEERSTLDQAFEDLKKL 435 >gi|167742980|ref|ZP_02415754.1| type III secretion system ATPase [Burkholderia pseudomallei 14] Length = 449 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 159/413 (38%), Positives = 233/413 (56%), Gaps = 9/413 (2%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77 VV+ G + + V+ L V LG+ + + L +V+ D+ + P Sbjct: 29 VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E+IS V GR I GRVI+ LG P+DG L L +++ P M Sbjct: 87 LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGAPLDGGPPLASETLQ-PLIAAPPEPM 145 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D +I+L+G Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205 Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE LG + +SVVV ATSD S + R A A IAEYF +G VLL+ Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ITA+ +VL Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ + + Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + L+ + E + IG Y+ G + + D+A+ + I F Q D ++ + Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 436 >gi|308183513|ref|YP_003927640.1| flagellum-specific ATP synthase [Helicobacter pylori PeCan4] gi|308065698|gb|ADO07590.1| flagellum-specific ATP synthase [Helicobacter pylori PeCan4] Length = 434 Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 158/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + S+ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|325567528|ref|ZP_08144195.1| flagellar protein export ATPase FliI [Enterococcus casseliflavus ATCC 12755] gi|325158961|gb|EGC71107.1| flagellar protein export ATPase FliI [Enterococcus casseliflavus ATCC 12755] Length = 450 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 159/404 (39%), Positives = 233/404 (57%), Gaps = 17/404 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G +S + + V L+ ++ V Q K L +V+ V + P+ E I Sbjct: 24 GKVSEVVGLLIKVEGLAVFIGEICEVALQNKTHTALAEVVGFVKKTVLLMPLDQLEGIGP 83 Query: 84 GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN----- 137 G LV G+ + G ++ LG+P+D L +E S+ P + + Sbjct: 84 GCLVRPTGKSLTVKIDDTLLGHTLDGLGRPLDMA-------LDLETASEYPVSQDSPDPF 136 Query: 138 -RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 RQ++ + TG+R ID + GQRIG+FAGSG+GKSTLL M AR D ++I L+G Sbjct: 137 RRQKIAEIMPTGVRAIDGLLTVGLGQRIGIFAGSGVGKSTLLGMLARYCEADVIVIGLIG 196 Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREV+EFIE+ LG + +KSVVV ATSD P++R A IAEY+ +G V+L+ Sbjct: 197 ERGREVKEFIENDLGPEGYRKSVVVCATSDMPPLVRLKGAHVATAIAEYYRDQGKKVVLM 256 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI ++GE P +GY SVF+ LP+LLER G S +KG+ITA +VLV Sbjct: 257 MDSVTRFAMAQREIGLSTGEPPTTKGYTPSVFTALPKLLERSGMS--DKGSITAFYTVLV 314 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 +GD+ N+PIAD+VR ILDGHI+L+R +A + YP +D S+SRL S ++ + Sbjct: 315 EGDDMNEPIADAVRGILDGHILLSRKIAAQNHYPAIDIQNSLSRLMKTLVSEEQHEHAGE 374 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L + + E +D+ IG Y+ G + + D+A+ I FL+Q Sbjct: 375 LKENMAVYAEAKDLIDIGAYKSGSNALTDQAIALHHPILRFLQQ 418 >gi|326315348|ref|YP_004233020.1| type III secretion apparatus H+-transporting two-sector ATPase [Acidovorax avenae subsp. avenae ATCC 19860] gi|89111182|dbj|BAE80271.1| HrcN [Acidovorax avenae subsp. avenae] gi|323372184|gb|ADX44453.1| type III secretion apparatus H+-transporting two-sector ATPase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 442 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 141/323 (43%), Positives = 206/323 (63%), Gaps = 4/323 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI++LG+PIDG L + + + + P M R+ +E TG++ ID L GQ Sbjct: 108 GRVIDSLGQPIDGKGPLDCSE-TRPVFALPPTPMEREMIEHPLPTGVKAIDGLITLGEGQ 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FA +G+GKSTL+ M AR D +I+L+GERGREVREF+E LG+ + +SVVV Sbjct: 167 RMGIFAPAGVGKSTLMGMLARGTQCDVSVIALIGERGREVREFVEFILGEEGMARSVVVC 226 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD S R A A +AEY+ +G VLL++DS+TRFA + REI +GE P RG Sbjct: 227 ATSDRSSSERAKAAHVATAVAEYYRDQGLKVLLMMDSLTRFARAQREIGLAAGEPPARRG 286 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF+E+PRLLER G + G+ITA+ +VL + ++ NDPI++ VR ILDGH++L+R Sbjct: 287 FPPSVFAEIPRLLERAGMGAR--GSITALYTVLYEDESGNDPISEEVRGILDGHMILSRK 344 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A +YP +D L S+SR+ + + ++ L+ ++EE + +G Y+PG D Sbjct: 345 IAARNQYPAIDVLGSLSRVMSQIVPREHQQAGGRFRQLMAKYEEIEPLVQMGEYKPGNDP 404 Query: 402 ILDKAVHQVPIIYDFLKQSPSDL 424 + D+A+ + I FL QS SDL Sbjct: 405 LADEAMEKHEEIRAFLNQSTSDL 427 >gi|254779933|ref|YP_003058040.1| flagellum-specific ATP synthase [Helicobacter pylori B38] gi|254001846|emb|CAX30094.1| Flagellum-specific ATP synthase [Helicobacter pylori B38] Length = 434 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + S+ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDITSESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|16760916|ref|NP_456533.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141392|ref|NP_804734.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213053041|ref|ZP_03345919.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213425002|ref|ZP_03357752.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213612434|ref|ZP_03370260.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646784|ref|ZP_03376837.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855157|ref|ZP_03383397.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289829464|ref|ZP_06547076.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25290438|pir||AE0752 flagellum-specific ATP synthase [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503213|emb|CAD05720.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi] gi|29137019|gb|AAO68583.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 456 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 198/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+L G L PP + R +E +TG+R I+ Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLETGVRAINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR + V L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLISVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + FL+Q Sbjct: 409 AYAKGSDPMLDKAITLWPQLEAFLQQ 434 >gi|257871292|ref|ZP_05650945.1| flagellum-specific ATP synthase [Enterococcus gallinarum EG2] gi|257805456|gb|EEV34278.1| flagellum-specific ATP synthase [Enterococcus gallinarum EG2] Length = 450 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 158/398 (39%), Positives = 227/398 (57%), Gaps = 5/398 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G +S + + V L+ ++ V Q K L +V+ V + P+ E I Sbjct: 24 GKVSEVVGLLIKVEGLAVFIGEICEVALQNKTHTALAEVVGFVKKTVLLMPLDQLEGIGP 83 Query: 84 GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G LV G+ + G ++ LG+P+D L + P RQ++ Sbjct: 84 GCLVRPTGKSLTVKIDDTLLGHTLDGLGRPLDMALDLESAP-EYPVSQDSPDPFRRQKIA 142 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 + TG+R ID + GQRIG+FAGSG+GKSTLL M AR D ++I L+GERGREV Sbjct: 143 EIMPTGVRAIDGLLTVGLGQRIGIFAGSGVGKSTLLGMLARYCEADVIVIGLIGERGREV 202 Query: 203 REFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 +EFIE+ LG + +KSVVV ATSD P++R A IAEY+ +G V+L++DS+TR Sbjct: 203 KEFIENDLGPEGYRKSVVVCATSDMPPLVRLKGAHVATAIAEYYRDQGKKVVLMMDSVTR 262 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 FA + REI ++GE P +GY SVF+ LP+LLER G S +KG+ITA +VLV+GD+ N Sbjct: 263 FAMAQREIGLSTGEPPTTKGYTPSVFTALPKLLERSGMS--DKGSITAFYTVLVEGDDMN 320 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 +PIAD+VR ILDGHI+L+R +A + YP +D S+SRL S + K L + Sbjct: 321 EPIADAVRGILDGHILLSRKIAAQNHYPAIDIQNSLSRLMKTLVSEKQHKHAGELKENMA 380 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + E +D+ IG Y+ G + + D+A+ I FL+Q Sbjct: 381 VYAEAKDLIDIGAYKSGSNALTDQAIALHHPILRFLQQ 418 >gi|217032110|ref|ZP_03437610.1| hypothetical protein HPB128_16g70 [Helicobacter pylori B128] gi|216946258|gb|EEC24866.1| hypothetical protein HPB128_16g70 [Helicobacter pylori B128] Length = 434 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + S+ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|318605260|emb|CBY26758.1| flagellum-specific ATP synthase FliI [Yersinia enterocolitica subsp. palearctica Y11] Length = 455 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 145/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R +E+ G+R I+ + GQ Sbjct: 118 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 176 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 177 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIA 236 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 237 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 296 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 297 YPPSVFAKLPALVERAGNGMSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 356 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + V L+ F+ RD+ +G Y G D Sbjct: 357 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDP 416 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 +LDKA+ P + FL+Q + SS ED Q + Sbjct: 417 LLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 449 >gi|260845697|ref|YP_003223475.1| translocator EscN [Escherichia coli O103:H2 str. 12009] gi|57434457|emb|CAI43874.1| EscN protein [Escherichia coli] gi|257760844|dbj|BAI32341.1| translocator EscN [Escherichia coli O103:H2 str. 12009] Length = 446 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 150/372 (40%), Positives = 216/372 (58%), Gaps = 3/372 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P+ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHISGMYCGQWLSYQGDEFKIRVGDELLGRLVDGIGRPMG 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 SNITAPYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAE+F +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 244 AFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ +++ + + LI ++ + IG Y G D DKA+ I Sbjct: 362 LSASRVMHNVVTSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQ 421 Query: 415 DFLKQSPSDLSS 426 F++QS D+SS Sbjct: 422 SFIQQSTKDISS 433 >gi|212702678|ref|ZP_03310806.1| hypothetical protein DESPIG_00706 [Desulfovibrio piger ATCC 29098] gi|212673950|gb|EEB34433.1| hypothetical protein DESPIG_00706 [Desulfovibrio piger ATCC 29098] Length = 438 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 154/380 (40%), Positives = 225/380 (59%), Gaps = 8/380 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119 +V+ ++ + P+G + IS V G P GRV++ LG+ +DG ++ Sbjct: 61 EVVGFVRNVALLSPLGNMQGISPATEVIPTGEILSVPVGYELLGRVVDGLGQAMDGGPAI 120 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + ++++ P M R+ + K G+RVID GQR+G+FA +G GKSTLLS Sbjct: 121 -RTRTHYPLVAEAPNPMTRKVISKPISLGLRVIDGVLTCGEGQRMGIFAAAGGGKSTLLS 179 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 + D +++L+GERGREVREFIE +G + KK+V+VV+TSD S + R A TA Sbjct: 180 SILKGCTADVCVLALIGERGREVREFIERDIGPEGRKKAVLVVSTSDRSSMERLKAAYTA 239 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G +VLL++DS+TRF + REI +GE P RG+P SVFSELP+L+ER G Sbjct: 240 TAIAEYFRDQGKSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSELPKLMERAG 299 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 S +KG+ITA+ +VLV+GD+ +PIAD RSILDGHIVL+R LA YP +D ASVS Sbjct: 300 NS--DKGSITALYTVLVEGDDMTEPIADETRSILDGHIVLSRKLAAANHYPAIDVQASVS 357 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + K +L ++ ++ E + IG Y+ G D D A+ + + FL+ Sbjct: 358 RVMNAVVDKEHKAAAQALRKILAKYAEVELLVQIGEYKKGADAEADFALGHIQAVNAFLR 417 Query: 419 QSPSDLSSEDVFQEITKKLQ 438 Q + SS F+E L+ Sbjct: 418 QGLEEKSS---FEETLAALK 434 >gi|170701290|ref|ZP_02892256.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria IOP40-10] gi|170133813|gb|EDT02175.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria IOP40-10] Length = 463 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 156/368 (42%), Positives = 224/368 (60%), Gaps = 10/368 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCGRVINALGKPIDGDD 117 +V+ + ++ + P G +S V R RI P GRVI++LG+PIDG Sbjct: 85 EVVGFSRNVALLSPFGRLGSVSRATRVVGLRRPLSLRIGPR--LLGRVIDSLGEPIDGKG 142 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + D +++ P M+R V+ TG+RV+D L GQR+G+FA +G+GKSTL Sbjct: 143 PL-ECDEWQPVIADPPDPMSRPVVDTPMPTGVRVVDGMMTLAEGQRMGIFAPAGVGKSTL 201 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 + MFAR D +I+L+GERGREVREF E LG + + +SVVV ATSD S I R A Sbjct: 202 MGMFARGARCDVNVIALIGERGREVREFCEHILGPEGMARSVVVCATSDRSSIERAKAAY 261 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +AEYF +G VLL++DS+TRFA + REI GE P RG+P S+F+ELPRLLER Sbjct: 262 AATAVAEYFRDRGMRVLLMMDSLTRFARAQREIGLAMGEPPTRRGFPPSIFAELPRLLER 321 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S E G+ITA+ +VL + ++ DPIA+ VR ILDGH++L+R +A + RYP +D L S Sbjct: 322 AGRS--ELGSITALYTVLAEDESGGDPIAEEVRGILDGHMILSREIAAQNRYPAIDVLGS 379 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ + S + + L+ + +E + +G Y+ G D + D+A+ ++ I F Sbjct: 380 LSRVMTQVVSREHVAAAGHVRRLMAKHKEVELLLQVGEYQSGTDALADEAIARIDAIRAF 439 Query: 417 LKQSPSDL 424 L Q P+DL Sbjct: 440 LGQ-PTDL 446 >gi|157145265|ref|YP_001452584.1| flagellum-specific ATP synthase [Citrobacter koseri ATCC BAA-895] gi|157082470|gb|ABV12148.1| hypothetical protein CKO_01002 [Citrobacter koseri ATCC BAA-895] Length = 456 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG + + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTTETGALITQPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGADGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTSLITEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + FL+Q Sbjct: 414 SDPMLDKAIALWPQLEAFLQQ 434 >gi|253990097|ref|YP_003041453.1| flagellum-specific ATP synthase [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781547|emb|CAQ84710.1| flagellum-specific ATP synthase [Photorhabdus asymbiotica] Length = 455 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 162/430 (37%), Positives = 237/430 (55%), Gaps = 23/430 (5%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL----GQVIRINLDIVYICPVGIGE 79 G ++ T + T L ++ LG + + +N N+ +V+ N D + + P+ E Sbjct: 29 GRLTRATGLVMEATGL--HLPLGATCLIERQNGGNIEEVESEVVGFNGDKLLLMPLEDLE 86 Query: 80 EISLGDLVFHW---------GR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM 129 I G V+ GR + P GRV++ G+P+DG S G + Sbjct: 87 GIVPGARVYSRPYSGEDCSSGRQLPLGPE--LLGRVLDGAGRPLDGFPSPDTGYRAPLTT 144 Query: 130 SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189 + P + R + + G+R I+ + GQR+G+FAGSG+GKS LL M AR D Sbjct: 145 PPINP-LQRTPISEVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADV 203 Query: 190 VIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK 248 +++ L+GERGREV++FIE+ LG L +SVVV A +D SP+LR A IAE F + Sbjct: 204 IVVGLIGERGREVKDFIENILGATGLARSVVVAAPADISPLLRMQGASYATRIAEDFRDR 263 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 G +VLLI+DS+TR++ + REIA GE P +GYP SVF++LP L+ER G G+IT Sbjct: 264 GKHVLLIMDSLTRYSMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGVNGGGSIT 323 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 A +VL +GD+ DPIAD+ R+ILDGHIVL+RSLAE G YP +D AS+SR + Sbjct: 324 AFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTSLINKQ 383 Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + V L+ ++ RD+ +G Y G D +LDKA+ P + FL+Q D+ Sbjct: 384 HYRQVQQFKQLLASYQRNRDLINVGAYAAGSDPLLDKAIELYPYMAQFLQQ---DIEERS 440 Query: 429 VFQEITKKLQ 438 + +LQ Sbjct: 441 EYAAACTQLQ 450 >gi|87307395|ref|ZP_01089540.1| flagellum-specific ATP synthase [Blastopirellula marina DSM 3645] gi|87290135|gb|EAQ82024.1| flagellum-specific ATP synthase [Blastopirellula marina DSM 3645] Length = 456 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 163/423 (38%), Positives = 247/423 (58%), Gaps = 15/423 (3%) Query: 9 AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINL 67 +QL + S +LV GG + +I + T+ +G V Q ++ L G+V+ Sbjct: 6 SQLDQLMSHDLV--GGVVETIGT---TIAVGGFPAPVGSVVEIQRQSGKPLAGEVVGFRG 60 Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSM 126 ++ + P+ + G V R P GR+++A G IDG L+M Sbjct: 61 ELTLVFPLEQLSGVRQGSSVRLIRTMRSIPVGDSLLGRIVDAHGNCIDG---FPHPALTM 117 Query: 127 EI-MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 M + PP A +R R+ + F TG+R ID GQRIG+FAGSG+GKS L M A+ Sbjct: 118 RSPMDQDPPIATSRPRIHETFSTGVRAIDGMLTCGDGQRIGIFAGSGVGKSVTLGMMAKY 177 Query: 185 DCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + +I+L+GERGREV +FIE LG + + +SVV+VATSD+ I+R A + A +IAE Sbjct: 178 ASSEVNVIALIGERGREVNDFIERDLGPEGMARSVVIVATSDQPAIMRVQAAMAATSIAE 237 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 YF G VL ++DS+TRFA + REI +GE P +GY SVF+ LP+L+ER G S + Sbjct: 238 YFRESGRRVLFMMDSVTRFAMAQREIGLAAGEPPTTKGYTPSVFAMLPKLVERTGRSAQ- 296 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+ITA +VLV+GD+ N+P++D+VR +LDGH++L+R++A +G YP +D LAS+SRL + Sbjct: 297 -GSITAFYTVLVEGDDTNEPVSDAVRGLLDGHVILSRAIAAKGHYPAIDILASISRLMND 355 Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 S + ++ ++ L+ + E D+ IG YR G + +D A+ I FL+Q+ + Sbjct: 356 LVSEETRRAAQTIRELMSTYRENEDLINIGAYRQGTNPQIDLAIRMRSEIDTFLRQAMEE 415 Query: 424 LSS 426 SS Sbjct: 416 KSS 418 >gi|170725976|ref|YP_001760002.1| flagellum-specific ATP synthase [Shewanella woodyi ATCC 51908] gi|169811323|gb|ACA85907.1| flagellar protein export ATPase FliI [Shewanella woodyi ATCC 51908] Length = 446 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 145/364 (39%), Positives = 221/364 (60%), Gaps = 3/364 (0%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117 + +VI + +++Y+ P+ + G V G + ++ GRV++ G P+DG Sbjct: 61 VAEVIGFDDELLYLMPIEELRGVLPGAKVTPLGEQSGLNVGLSLLGRVLDGNGLPLDGLG 120 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + + P ++R+ + + G+R I+ + GQR+G+FAGSG+GKS L Sbjct: 121 RLQTDQKAPRHAQSINP-LSRRAITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVL 179 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M R D +++ LVGERGREV+EFIE+ LGD + +SVVV A +D SP++R A Sbjct: 180 LGMMTRGTTADVIVVGLVGERGREVKEFIEEILGDEGRARSVVVAAPADTSPLMRLRACE 239 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T+ IAEYF G NVLL++DS+TR+A + REIA GE P +GYP SVF++LP+L+ER Sbjct: 240 TSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVER 299 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R LA+ G YP +D AS Sbjct: 300 AGNGGSGQGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRQLADSGHYPAIDIEAS 359 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+A S + + + + + +++ RD+ IG Y G D +D ++ P + F Sbjct: 360 ISRVAPMVISPEHLEAMRRVKQVYSLYQQNRDLISIGAYTQGSDPRIDNSIRLQPAMNAF 419 Query: 417 LKQS 420 L+Q+ Sbjct: 420 LRQT 423 >gi|332161339|ref|YP_004297916.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325665569|gb|ADZ42213.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 454 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 145/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R +E+ G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 296 YPPSVFAKLPALVERAGNGMSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + V L+ F+ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 +LDKA+ P + FL+Q + SS ED Q + Sbjct: 416 LLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 448 >gi|207091752|ref|ZP_03239539.1| flagellum-specific ATP synthase [Helicobacter pylori HPKX_438_AG0C1] Length = 434 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 158/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + S+ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|83646778|ref|YP_435213.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396] gi|83634821|gb|ABC30788.1| flagellum-specific ATP synthase [Hahella chejuensis KCTC 2396] Length = 416 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 160/395 (40%), Positives = 230/395 (58%), Gaps = 10/395 (2%) Query: 38 CLSQYVCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFR 94 C LG+ V G+ + +V+ V + P+G I +G V G Sbjct: 11 CAGPDAFLGEVCEVFSPGQLTSIAAEVVGFRHGRVLLMPLGRVTGIHVGSEVVATGLPAS 70 Query: 95 ISPSACWCGRVINALGKPIDGD--DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 ++ + G+V+NA G P+DG S GK S + + M R ++ G+RVI Sbjct: 71 VTVNDGMLGKVVNAFGTPLDGGVLSSPGK---SYPLYREPINPMERAPCDEPLNLGVRVI 127 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211 D F + GQR+G+FAGSG+GKSTLL M A+ + +I+L+GERGREV EFI+D LG Sbjct: 128 DAFCAMAKGQRVGIFAGSGVGKSTLLGMIAKQCDAEVNVIALIGERGREVSEFIQDNLGS 187 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 D LKKSVVV AT+DE ++R A A IAEYF KG +V+L +DSITR A + REI Sbjct: 188 DGLKKSVVVAATADEPALVRVHAAFVATAIAEYFKDKGKHVMLYMDSITRLATAQREIGL 247 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 GE P +RGY S FS LPRL ER G K G+I+A+ +VLV+GD+ N+P++D+VRSI Sbjct: 248 AIGEPPTSRGYTPSTFSLLPRLTERAGIF-KSGGSISALYTVLVEGDDFNEPVSDTVRSI 306 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHI+L R LA +G +P +D S+SRL + +++ V L L ++E++++ Sbjct: 307 LDGHIMLKRQLAHQGIFPAIDIRESMSRLFPRVTGKEQQMAVRELIRLESLYQESKELIE 366 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 +G Y+ G D +D+A+ + F+ QS + S Sbjct: 367 LGAYKQGGDPEIDQAIRVHKALNKFISQSEGESGS 401 >gi|209695737|ref|YP_002263667.1| flagellum-specific ATP synthase [Aliivibrio salmonicida LFI1238] gi|208009690|emb|CAQ79989.1| polar flagellum-specific ATP synthase FliI [Aliivibrio salmonicida LFI1238] Length = 439 Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 138/336 (41%), Positives = 213/336 (63%), Gaps = 2/336 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +GKPIDG + + + + P ++R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGKPIDGLGDIYTEQTASFTSTPINP-LSRKPIREPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIED LG + ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEDILGTEGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +++G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGNEDQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + ++ ++ + +D+ IG Y+PG + Sbjct: 341 MADAGHYPAIDVERSVSRVMPQITDEEHMLMSKAVRQVLATCRKNQDLVSIGAYKPGTNP 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 +D+A P + ++L+Q + D+ + + K L Sbjct: 401 AIDQAFTLKPRLDEYLQQRMKETVPFDMCKNMLKML 436 >gi|187478207|ref|YP_786231.1| flagellum-specific ATP synthase [Bordetella avium 197N] gi|115422793|emb|CAJ49321.1| flagellum-specific ATP synthase [Bordetella avium 197N] Length = 479 Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 141/325 (43%), Positives = 203/325 (62%), Gaps = 6/325 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+D L +L+ + P ++R ++ G+R I+ + Sbjct: 130 ALLGRVVDGAGRPLDDLGPLTGAELAPLAAQPINP-LSRAPIDSVLDVGVRAINGLLTVG 188 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SV Sbjct: 189 RGQRMGLFAGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSV 248 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP+LR A +AE+F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 249 VVAAPADVSPLLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPA 308 Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334 +GYP SVF++LP L+ER G P + G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 309 TKGYPPSVFAKLPMLVERTGMGAPGPNGRAGSITAFYTVLAEGDDQQDPIADSARAILDG 368 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 H+VL+R+LAE G YP +D AS+SR + + LV ++ R++ RD+ +G Sbjct: 369 HVVLSRTLAEAGHYPAIDIEASISRAMTSLITPQQFNLVRRFKQMLSRYQRNRDLISVGA 428 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y PG D LD+A+ + P + FL+Q Sbjct: 429 YVPGADPQLDEAIARYPRLEAFLQQ 453 >gi|238764900|ref|ZP_04625840.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638] gi|238696919|gb|EEP89696.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638] Length = 454 Score = 263 bits (673), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 145/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R +E+ G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 296 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + V L+ F+ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 +LDKA+ P + FL+Q + SS ED Q + Sbjct: 416 LLDKAIALYPQMEIFLQQGMYERSSYEDACQHL 448 >gi|168234145|ref|ZP_02659203.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472268|ref|ZP_03078252.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458632|gb|EDX47471.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205331873|gb|EDZ18637.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 456 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+L G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLDTGVRAINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR + V L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + FL+Q Sbjct: 409 AYAKGSDPMLDKAITLWPQLEAFLQQ 434 >gi|149178726|ref|ZP_01857309.1| flagellum-specific ATP synthase [Planctomyces maris DSM 8797] gi|148842424|gb|EDL56804.1| flagellum-specific ATP synthase [Planctomyces maris DSM 8797] Length = 458 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 142/324 (43%), Positives = 208/324 (64%), Gaps = 8/324 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++ G+ IDG + + LS K P +NR R++ TGIR ID Sbjct: 97 GRVLDGRGRCIDGKN---QAMLSHRANLKAKPISPLNRPRIDSPLSTGIRTIDGLLTCGK 153 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FAGSG+GKSTL+ AR D ++ LVGERGREVREF++ LG + L++SVV Sbjct: 154 GQRLGIFAGSGVGKSTLMGQMARQSSADINVVCLVGERGREVREFLDRDLGSEGLERSVV 213 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 +VATSDE ++R A A ++E+F G +VLL++DS+TR+A + REI +GE P Sbjct: 214 IVATSDEPALIRLRAAHLATAVSEFFRDCGKDVLLMMDSVTRYALAQREIGLAAGEPPAT 273 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVFS LP+LLER G E G+IT +VLV+ D+ N+PI+D+VR ILDGHI+L+ Sbjct: 274 RGYPPSVFSLLPKLLERSG--RTESGSITGFYTVLVEADDANEPISDTVRGILDGHIMLS 331 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA E +P +D L S+SR + SA+ ++ V+ + L+ ++++ D+ IG Y+ G Sbjct: 332 RKLAHESHWPAIDVLQSISRSMNDITSAEHQQSVAQIKKLMAAYQQSEDLISIGAYQAGS 391 Query: 400 DLILDKAVHQVPIIYDFLKQSPSD 423 + +D A+ P+ ++LKQ ++ Sbjct: 392 NPEVDLAIKMRPLWNEYLKQGNTE 415 >gi|16765310|ref|NP_460925.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62180547|ref|YP_216964.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161613459|ref|YP_001587424.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552796|ref|ZP_02346547.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993547|ref|ZP_02574641.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168239212|ref|ZP_02664270.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244823|ref|ZP_02669755.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259741|ref|ZP_02681714.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168462487|ref|ZP_02696418.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168823015|ref|ZP_02835015.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194445652|ref|YP_002041237.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449682|ref|YP_002046023.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194737833|ref|YP_002115006.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197247761|ref|YP_002146051.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262536|ref|ZP_03162610.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245111|ref|YP_002215114.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390464|ref|ZP_03217075.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204931084|ref|ZP_03221910.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352334|ref|YP_002226135.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856515|ref|YP_002243166.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238912455|ref|ZP_04656292.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|120332|sp|P26465|FLII_SALTY RecName: Full=Flagellum-specific ATP synthase gi|154029|gb|AAA27101.1| flagellar protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420507|gb|AAL20884.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|62128180|gb|AAX65883.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161362823|gb|ABX66591.1| hypothetical protein SPAB_01176 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404315|gb|ACF64537.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407986|gb|ACF68205.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194713335|gb|ACF92556.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195634519|gb|EDX52871.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197211464|gb|ACH48861.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240791|gb|EDY23411.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288094|gb|EDY27481.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939627|gb|ACH76960.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602909|gb|EDZ01455.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320128|gb|EDZ05333.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205272115|emb|CAR36968.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322649|gb|EDZ10488.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328423|gb|EDZ15187.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205336374|gb|EDZ23138.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205340669|gb|EDZ27433.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350730|gb|EDZ37361.1| flagellar protein export ATPase FliI [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708318|emb|CAR32621.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261247138|emb|CBG24961.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993961|gb|ACY88846.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158486|emb|CBW17996.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912962|dbj|BAJ36936.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085409|emb|CBY95190.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224617|gb|EFX49680.1| Flagellum-specific ATP synthase FliI [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616965|gb|EFY13873.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618204|gb|EFY15096.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625875|gb|EFY22694.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626327|gb|EFY23137.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632742|gb|EFY29487.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639084|gb|EFY35777.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640400|gb|EFY37056.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647239|gb|EFY43738.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649913|gb|EFY46334.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655521|gb|EFY51829.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660299|gb|EFY56537.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662980|gb|EFY59187.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668165|gb|EFY64324.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674076|gb|EFY70170.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675572|gb|EFY71646.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683017|gb|EFY79033.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686711|gb|EFY82689.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195401|gb|EFZ80581.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198071|gb|EFZ83188.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204457|gb|EFZ89463.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207547|gb|EFZ92495.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211014|gb|EFZ95874.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217532|gb|EGA02251.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219607|gb|EGA04091.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226678|gb|EGA10875.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231554|gb|EGA15667.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235997|gb|EGA20076.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240567|gb|EGA24610.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245459|gb|EGA29459.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323250229|gb|EGA34121.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253960|gb|EGA37784.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323262110|gb|EGA45673.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266233|gb|EGA49723.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270658|gb|EGA54099.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326627384|gb|EGE33727.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332988861|gb|AEF07844.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 456 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+L G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLDTGVRAINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR + V L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + FL+Q Sbjct: 409 AYAKGSDPMLDKAITLWPQLEAFLQQ 434 >gi|315126016|ref|YP_004068019.1| FliI, flagellum-specific ATP synthase [Pseudoalteromonas sp. SM9913] gi|315014530|gb|ADT67868.1| Putative FliI, flagellum-specific ATP synthase [Pseudoalteromonas sp. SM9913] Length = 449 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 153/374 (40%), Positives = 224/374 (59%), Gaps = 23/374 (6%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-------ISPSACWCGRVINALGKP 112 +V+ N D Y+ P+ + + + GR R ++ S GRVI+A +P Sbjct: 61 AEVVGFNQDEAYLMPLKKIQNL------YSGGRVRPVIKNSHVAISEKLLGRVIDAQMQP 114 Query: 113 IDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 ID D ++ L + S P + R+ V + GIR I+ + GQR+G+ Sbjct: 115 IDNLGPLEQDSTMSACKLGND-YSLTP--LERKGVTEPLDVGIRAINSLFSVGKGQRLGL 171 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSD 225 FAGSG+GKS LL M R D VI+SLVGERG EV++FIE LG + LKK++V+ + +D Sbjct: 172 FAGSGVGKSKLLGMMTRFTSADVVIVSLVGERGWEVKDFIEQSLGKEGLKKAIVIASPAD 231 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 +SP+LR A + +A YF K NVLL++DS+TR+A + REI + GELP ++GYP S Sbjct: 232 DSPLLRIKAAELSHKLAAYFRDKNSNVLLLMDSLTRYAQAQREIGLSVGELPASKGYPPS 291 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VFS+L +L+E G SEK KG++TA+ +VL +GD+ DPIAD+ R+ILDGHIVL+R+LAE+ Sbjct: 292 VFSKLTQLVESSGNSEKSKGSMTAIYTVLAEGDDQQDPIADNARAILDGHIVLDRTLAEK 351 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 G YP ++ +S+SR+ S ++ L L R+ + ++ +G Y+ G D LD Sbjct: 352 GHYPAINISSSISRVMPNIVSDEQLSFCYKLKKLYSRYMQVHELIPLGAYQAGKDPELDS 411 Query: 406 AVHQVPIIYDFLKQ 419 AV+ P I FL Q Sbjct: 412 AVNLYPKIESFLCQ 425 >gi|145297447|ref|YP_001140288.1| lateral flagellar FliI-like assembly ATPase protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142850219|gb|ABO88540.1| lateral flagellar FliI-like assembly ATPase protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 446 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 157/385 (40%), Positives = 227/385 (58%), Gaps = 9/385 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117 L +V+ N DI Y+ P+ + G V G I GRV++ L +P+DG Sbjct: 60 LAEVVGFNRDISYLMPLQPMSGLYAGARVLPIDGEETIQVGEHLLGRVVDGLLQPLDGRP 119 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC---HGQRIGVFAGSGIGK 174 G+ + + + P + R V + GIR I+ L GQR+G+FAGSG+GK Sbjct: 120 LRDDGE-RVALFAIPPNPLLRTPVREPLDVGIRAINGLNGLLTVGKGQRLGLFAGSGVGK 178 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKM 233 S LL M R+ V++ L+GERGREVREFIE LG + L ++VVV A +D+SP++R Sbjct: 179 SMLLGMMTRNTTAQIVVVGLIGERGREVREFIEHSLGPEGLARAVVVAAPADQSPLMRLR 238 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A IAEYF +G +VLL++DS+TR+A + REI GE P RGYP SVFS L +L Sbjct: 239 AAQLCHRIAEYFREQGRDVLLLMDSLTRYAQAQREIVLAIGEPPATRGYPPSVFSMLTQL 298 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 +ER G + G+++A +VL +GD+ DP+ D+ R+ILDGHIVL R LAEEG YP +D Sbjct: 299 VERAGNGIHQDGSLSAFYTVLAEGDDQQDPVVDAARAILDGHIVLTRRLAEEGHYPAIDI 358 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 ASVSR+ + A+ + L +L L R+++ R++ +GGY+PG D +D+AV + P I Sbjct: 359 GASVSRVMPQVVPAEWQTLAVTLRQLWGRYQQVRELLPLGGYQPGADPQMDEAVQRYPAI 418 Query: 414 YDFLKQSPSDLSSEDVFQEITKKLQ 438 FL+Q + E F ++ L+ Sbjct: 419 AAFLQQG---IHEETPFVQVMTGLK 440 >gi|145597809|ref|YP_001161885.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F] gi|145209505|gb|ABP38912.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F] Length = 442 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 150/363 (41%), Positives = 207/363 (57%), Gaps = 12/363 (3%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117 QV+ + DI Y+ P + G VF G I S W GRVIN LG+P+DG Sbjct: 60 QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPLDGKG 117 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 LG + + ++ P + R+ V+ G+ I+ + GQR+G+ AGSG+GKS L Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236 L M R D V++ L+GERGREV+EFIE L + KSVVV A +DESP++R A Sbjct: 177 LGMITRYTQADVVVVGLIGERGREVKEFIEHSLQAAGMAKSVVVAAPADESPLMRIKATE 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 IA Y+ KG +VLL++DS+TR+A + REIA + GE P +GYP S FS +PRL E Sbjct: 237 LCHAIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S +TA+ +VL +GD+ DPI D R++LDGHIVL+R LAE G YP +D S Sbjct: 297 AGNS-----TMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRKLAEAGHYPAIDISQS 351 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + + + K S L + + + +GGY G D + D+AVH P I F Sbjct: 352 ISRCMSQVIGSQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQF 411 Query: 417 LKQ 419 L+Q Sbjct: 412 LRQ 414 >gi|167626147|ref|YP_001676441.1| FliI/YscN family ATPase [Shewanella halifaxensis HAW-EB4] gi|167356169|gb|ABZ78782.1| ATPase, FliI/YscN family [Shewanella halifaxensis HAW-EB4] Length = 446 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 146/340 (42%), Positives = 207/340 (60%), Gaps = 5/340 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 GR +I GRV++ LG+P+D D K + + K + R+ + GIR Sbjct: 87 GRCQIPTGLGLLGRVLDGLGQPLD-DLGCIKHLPHVPLQFKSINPLLRKPIRDPLDVGIR 145 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 I+ P+ GQR+G+FAGSG+GKS LL M R D V++ L+GERGREVREFIE+ L Sbjct: 146 SINALLPVGRGQRLGLFAGSGVGKSVLLGMMTRFTEADVVVVGLIGERGREVREFIEESL 205 Query: 211 GD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G+ K++VVV A +D +P++R A IA + +G VLL++DS+TR+A + REI Sbjct: 206 GEEGRKRAVVVAAPADTTPLMRMRAMRLCHHIAAAYRDQGKQVLLLVDSLTRYAQAQREI 265 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 A + GE P +GYP S F++LP L+E G S+ G +TA +VL +GD+ DPIADS R Sbjct: 266 ALSLGEPPATKGYPPSAFAQLPSLVEMAGNSQHPTGTLTAFYTVLTEGDDQQDPIADSAR 325 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 +ILDGHIVLNR LAE+G +P +D ASVSRLA + + HL R+ E +++ Sbjct: 326 AILDGHIVLNRKLAEQGHFPAIDIGASVSRLATQVAKQSSLEQGQWFRHLNSRYNEVKEL 385 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDLSS 426 +GGY+ G D +D AV P + FL+Q + +DL+S Sbjct: 386 LPLGGYQAGHDAEMDMAVRSYPQMAAFLRQATHTQADLTS 425 >gi|238788330|ref|ZP_04632124.1| Flagellum-specific ATP synthase [Yersinia frederiksenii ATCC 33641] gi|238723576|gb|EEQ15222.1| Flagellum-specific ATP synthase [Yersinia frederiksenii ATCC 33641] Length = 454 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 145/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R +E+ G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 296 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + V L+ F+ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 +LDKA+ P + FL+Q + SS ED Q + Sbjct: 416 LLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 448 >gi|317013186|gb|ADU83794.1| flagellum-specific ATP synthase [Helicobacter pylori Lithuania75] Length = 434 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + S+ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434 >gi|122919955|pdb|2DPY|A Chain A, Crystal Structure Of The Flagellar Type Iii Atpase Flii gi|122919956|pdb|2DPY|B Chain B, Crystal Structure Of The Flagellar Type Iii Atpase Flii Length = 438 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 147/327 (44%), Positives = 197/327 (60%), Gaps = 12/327 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+L G L PP + R +E TG+R I+ Sbjct: 97 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLDTGVRAINA 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D Sbjct: 151 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 211 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 270 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 271 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 330 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR + V L+ F+ RD+ +G Sbjct: 331 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVG 390 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQS 420 Y G D +LDKA+ P + FL+Q Sbjct: 391 AYAKGSDPMLDKAITLWPQLEAFLQQG 417 >gi|193062173|ref|ZP_03043269.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli E22] gi|194426383|ref|ZP_03058938.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli B171] gi|17384650|emb|CAC81862.1| EscN protein [Escherichia coli] gi|192932393|gb|EDV84991.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli E22] gi|194415691|gb|EDX31958.1| type III secretion apparatus H+-transporting two-sector ATPase [Escherichia coli B171] gi|195183198|dbj|BAG66743.1| translocator EscN [Escherichia coli O111:H-] gi|254692340|emb|CAR47981.1| EscN protein [Escherichia coli] gi|254692408|emb|CAR48051.1| EscN protein [Escherichia coli] Length = 446 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 150/372 (40%), Positives = 215/372 (57%), Gaps = 3/372 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P+ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHISGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMG 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 SNITAPYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAE+F +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 244 AFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ ++ + + LI ++ + IG Y G D DKA+ I Sbjct: 362 LSASRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQ 421 Query: 415 DFLKQSPSDLSS 426 F++QS D+SS Sbjct: 422 SFIQQSTKDISS 433 >gi|332162910|ref|YP_004299487.1| ATPase, FliI/YscN family [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325667140|gb|ADZ43784.1| ATPase, FliI/YscN family [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330862346|emb|CBX72506.1| flagellum-specific ATP synthase [Yersinia enterocolitica W22703] Length = 445 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 147/363 (40%), Positives = 211/363 (58%), Gaps = 8/363 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDD 117 QV+ + ++ Y+ P + + G VF G I S W GRV+N LG+PIDG Sbjct: 60 QVVGFDREVTYLMPFKQPDGLMSGARVFPCELDGELLIGDS--WLGRVVNGLGEPIDGKG 117 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 SLG + + ++ P + RQ V G++ I+ + GQR+G+ AGSG+GKS L Sbjct: 118 SLGGETPLQQQLPQIHP-LQRQPVSTPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSML 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236 L M R D V++ L+GERGREV+EFIE L + KSVV+ A +DESP++R A Sbjct: 177 LGMMTRYTQADVVVVGLIGERGREVKEFIEHSLQASGMAKSVVIAAPADESPLMRIKATE 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 ++A Y+ KG +VLL++DS+TR+A + REIA + GE P +GYP S FS +PRL E Sbjct: 237 LCHSVATYYRDKGKDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G +TA+ +VL +GD+ DPI D R++LDGHIVL+R LAE G YP +D S Sbjct: 297 AGNSHG-SGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRQLAESGHYPAIDIGQS 355 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + ++ + L + + + + +GGY G D + D+AV P I DF Sbjct: 356 ISRCMSQISPREQIQSARLLKQCYADYMDIKPLIPLGGYVAGADPMADRAVQYYPAIIDF 415 Query: 417 LKQ 419 L+Q Sbjct: 416 LRQ 418 >gi|300696963|ref|YP_003747624.1| FliI: flagellar Biosynthesis protein; flagellum-specific ATP synthase [Ralstonia solanacearum CFBP2957] gi|299073687|emb|CBJ53207.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP synthase [Ralstonia solanacearum CFBP2957] Length = 481 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 142/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A G+P+DG LG + L+ +S P + R+ +E G+R I+ + Sbjct: 138 GRVVDANGEPLDGKGPLGTHEELAWGSLSPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQ 197 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D V++ L+GERGREV+EFI++ LGD L +S V Sbjct: 198 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 257 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R A TIAEYF +G NVLLI+DS+TR+A + REIA GE P Sbjct: 258 VAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 317 Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +GYP S F++LP L+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDGH Sbjct: 318 KGYPPSAFAKLPALVERAGNGMVDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 377 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R LAE+G YP +D S+SR+ ++ L R++ RD+ +G Y Sbjct: 378 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVQREQLDTARRFKQLYARYQRNRDLIAVGAY 437 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G D + D+A+ + P + FL+Q Sbjct: 438 ARGSDPMTDQAIARYPDMEGFLQQ 461 >gi|2731646|gb|AAB93498.1| ATPase [Helicobacter pylori] Length = 434 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 158/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + S+ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434 >gi|224583529|ref|YP_002637327.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468056|gb|ACN45886.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|322715023|gb|EFZ06594.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130251|gb|ADX17681.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622862|gb|EGE29207.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 466 Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+L G L PP + R +E TG+R I+ Sbjct: 125 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLDTGVRAINA 178 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D Sbjct: 179 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 238 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 239 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 298 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 299 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 358 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR + V L+ F+ RD+ +G Sbjct: 359 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVG 418 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + FL+Q Sbjct: 419 AYAKGSDPMLDKAITLWPQLEAFLQQ 444 >gi|167464166|ref|ZP_02329255.1| flagellar protein export ATPase FliI [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382300|ref|ZP_08056207.1| flagellum-specific ATP synthase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153653|gb|EFX46028.1| flagellum-specific ATP synthase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 439 Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 152/372 (40%), Positives = 231/372 (62%), Gaps = 8/372 (2%) Query: 70 VYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G + I G V G+ P G+V++ LG+P+DG S ++ Sbjct: 69 VILMPLGELDSIGPGCDVVGTGKPLTVPVGHELLGKVLDGLGQPLDG--SFLPSRMTQYS 126 Query: 129 MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + P + R RV + G++ ID + GQR+G+FAGSG+GKSTL+ M AR+ Sbjct: 127 TNNSPNNPLQRPRVLEPLGVGVKCIDGLLTIGRGQRVGIFAGSGVGKSTLMGMIARNTEA 186 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+L+GERGREV +FIE LG + L +SVV+VATSD+ ++R L A +IAEYF Sbjct: 187 DVNVIALIGERGREVLDFIERDLGPEGLARSVVIVATSDQPALIRIKGALIATSIAEYFR 246 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G NV+L++DS+TRFA + RE+ GE P RGY SVF+ LP+LLER G KG+ Sbjct: 247 DRGLNVMLMMDSVTRFAMAQREVGLAVGEPPATRGYTPSVFALLPKLLERSG--NGPKGS 304 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R+LA +G YP +D L+SVSR+ + S Sbjct: 305 ITAFYTVLVDGDDMNEPIADAVRGILDGHIVLDRNLAHKGHYPAIDVLSSVSRVMKEIVS 364 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LS 425 +++ L L+ + ++ D+ +G Y+ G + +D ++ + I++F +Q +D ++ Sbjct: 365 DEQQSAADQLKRLLAIYRDSEDLINLGAYQKGSNPDIDLSLQYIESIWEFTRQKTTDKVT 424 Query: 426 SEDVFQEITKKL 437 E Q++ ++ Sbjct: 425 IEQAKQQLIEQF 436 >gi|261340406|ref|ZP_05968264.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus ATCC 35316] gi|288317498|gb|EFC56436.1| flagellar protein export ATPase FliI [Enterobacter cancerogenus ATCC 35316] Length = 456 Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGGGKPLDGLPSPDTTETGALITQPFNP-LQRTAIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGITGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALITEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + FL+Q Sbjct: 414 SDPMLDKAITLWPQLEAFLQQ 434 >gi|123442767|ref|YP_001006744.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089728|emb|CAL12581.1| flagellum-specific ATP synthase [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 443 Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 145/335 (43%), Positives = 202/335 (60%), Gaps = 3/335 (0%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++ KP+DG + G + I + P + R +E+ G+R I+ + Sbjct: 104 LLGRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGR 162 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV Sbjct: 163 GQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVV 222 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 + A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 223 IAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPAT 282 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+ Sbjct: 283 KGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLS 342 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LAE G YP +D AS+SR + V L+ F+ RD+ +G Y G Sbjct: 343 RRLAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGS 402 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 D +LDKA+ P + FL+Q + SS ED Q + Sbjct: 403 DPLLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 437 >gi|83747625|ref|ZP_00944661.1| FliI [Ralstonia solanacearum UW551] gi|207739706|ref|YP_002258099.1| flagellum-specific atp synthase protein [Ralstonia solanacearum IPO1609] gi|83725677|gb|EAP72819.1| FliI [Ralstonia solanacearum UW551] gi|206593088|emb|CAQ59994.1| flagellum-specific atp synthase protein [Ralstonia solanacearum IPO1609] Length = 481 Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 142/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A G+P+DG LG + L+ +S P + R+ +E G+R I+ + Sbjct: 138 GRVVDANGEPLDGKGPLGTHEELAWGSLSPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQ 197 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D V++ L+GERGREV+EFI++ LGD L +S V Sbjct: 198 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 257 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R A TIAEYF +G NVLLI+DS+TR+A + REIA GE P Sbjct: 258 VAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 317 Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +GYP S F++LP L+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDGH Sbjct: 318 KGYPPSAFAKLPALVERAGNGMVDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 377 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R LAE+G YP +D S+SR+ ++ L R++ RD+ +G Y Sbjct: 378 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVQREQLDAARRFKQLYARYQRNRDLIAVGAY 437 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G D + D+A+ + P + FL+Q Sbjct: 438 ARGSDPMTDQAIARYPDMEGFLQQ 461 >gi|207728377|ref|YP_002256771.1| flagellum-specific atp synthase protein [Ralstonia solanacearum MolK2] gi|206591623|emb|CAQ57235.1| flagellum-specific atp synthase protein [Ralstonia solanacearum MolK2] Length = 481 Score = 263 bits (672), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 142/324 (43%), Positives = 201/324 (62%), Gaps = 7/324 (2%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A G+P+DG LG + L+ +S P + R+ +E G+R I+ + Sbjct: 138 GRVVDANGEPLDGKGPLGTHEELAWGSLSPAPLNPLKRKPIEHVLDVGVRAINGLLTVGQ 197 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D V++ L+GERGREV+EFI++ LGD L +S V Sbjct: 198 GQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSAV 257 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R A TIAEYF +G NVLLI+DS+TR+A + REIA GE P Sbjct: 258 VAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPAT 317 Query: 280 RGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +GYP S F++LP L+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDGH Sbjct: 318 KGYPPSAFAKLPALVERAGNGMVDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDGH 377 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R LAE+G YP +D S+SR+ ++ L R++ RD+ +G Y Sbjct: 378 FVLSRKLAEQGHYPAIDIEQSISRVMSAIVQREQLDAARRFKQLYARYQRNRDLIAVGAY 437 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G D + D+A+ + P + FL+Q Sbjct: 438 ARGSDPMTDQAIARYPDMEGFLQQ 461 >gi|163781860|ref|ZP_02176860.1| flagellar export protein [Hydrogenivirga sp. 128-5-R1-1] gi|159883080|gb|EDP76584.1| flagellar export protein [Hydrogenivirga sp. 128-5-R1-1] Length = 428 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 146/362 (40%), Positives = 217/362 (59%), Gaps = 5/362 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 G+VI N D + P G I GD V G+V+N G+P+DG Sbjct: 43 GEVIGFNEDRCIVMPYGRLSGIKPGDRVLIKSEHVSTQVGKALLGKVVNPFGEPLDGSMV 102 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L +E+ S P + R+R+ + F TG+R I+ L GQ++G+FAG+G+GKSTLL Sbjct: 103 FTAERLPIELSSINP--LERERITEIFDTGVRSINAMFTLGKGQKVGIFAGAGVGKSTLL 160 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M D V+++L+GERGREVREF+ED LGD LKKSVVVV+T+DE P+++ L+A Sbjct: 161 GMITNYSNADVVVMALIGERGREVREFVEDVLGDGLKKSVVVVSTADEPPVVKVKGALSA 220 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 V A +F+S+G +VLL++DSITRFA + REI +GE P +GY SVF + ++E G Sbjct: 221 VVHARFFASQGLDVLLVMDSITRFAMAQREIGLAAGEPPTLKGYTPSVFHMMTNIVESCG 280 Query: 299 PSEKEKGNITAVISVLVDGDNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 + G+IT + SVLV+GD+ DP+AD++ + DGHIVL+R A G +P +DP+ S+ Sbjct: 281 NFTR-GGSITGIFSVLVEGDDITLDPVADALVGVFDGHIVLSRKRANAGLFPAIDPVKSL 339 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SRL K S + ++ + L+ +E D+ +G Y+ G +L +D+ + +I F Sbjct: 340 SRLMPKLVSEEHMRMAMYVKELLSSYESMEDLVNLGLYKRGSNLAVDRVIDNKELIDGFF 399 Query: 418 KQ 419 +Q Sbjct: 400 RQ 401 >gi|238758094|ref|ZP_04619274.1| Flagellum-specific ATP synthase [Yersinia aldovae ATCC 35236] gi|238703632|gb|EEP96169.1| Flagellum-specific ATP synthase [Yersinia aldovae ATCC 35236] Length = 454 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 199/327 (60%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R +E+ G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 296 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + V L+ F+ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSQVRQFKQLLASFQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + SS D Sbjct: 416 LLDKAIALYPQMEIFLQQGMFERSSYD 442 >gi|85711039|ref|ZP_01042099.1| flagellum-specific ATP synthase [Idiomarina baltica OS145] gi|85694952|gb|EAQ32890.1| flagellum-specific ATP synthase [Idiomarina baltica OS145] Length = 445 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 157/435 (36%), Positives = 239/435 (54%), Gaps = 9/435 (2%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 A L + V+ GY++ + + + + +G + + D +V+ Sbjct: 9 FASLKKRVKPAPVLVSGYLTRVVGLMFEAVGVR--APIGATCAVESAHGDIEAEVVGFEG 66 Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSM 126 Y+ P+ + G V R P GRVI+A G P+D + + + Sbjct: 67 QTSYLMPMDDAHGVVPGAKVKPLTRTEQLPLGLELLGRVIDARGHPLDAKGPILTDNQNA 126 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + P +NR+ V+ G+ I+ + GQR+G+FAGSG+GKS LL M + Sbjct: 127 YRSLPINP-LNRRPVKVPLDVGVNAINACITVGQGQRMGLFAGSGVGKSVLLGMMTKGTN 185 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +++ L+GERGREV+EFI++ LG+ L+K+VVV A +D+SP+LR TA +AEYF Sbjct: 186 ADVIVVGLIGERGREVKEFIDEILGEEGLEKAVVVAAPADQSPLLRLRGCETASKVAEYF 245 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G NVLL++DS+TR+A + REIA GE P +GYP SVF+ LP L+ER G +G Sbjct: 246 RDQGMNVLLLMDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGGGAQG 305 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIADS R+ILDGHIVLNR LA+ G YP +D AS+SR+ + Sbjct: 306 SITAFYTVLTEGDDLQDPIADSARAILDGHIVLNRELADSGHYPAIDIEASISRVMPQVV 365 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 S + + + + F RD+ IG Y G D +D+A+ P + FL Q +++ Sbjct: 366 SDEHLQRATKVRQWYSSFRRNRDLISIGAYSKGSDAKIDEAIAMQPQVEGFLTQRMNEVI 425 Query: 426 SED----VFQEITKK 436 S D Q++T++ Sbjct: 426 SYDESLMKLQQLTQR 440 >gi|91792685|ref|YP_562336.1| flagellum-specific ATP synthase [Shewanella denitrificans OS217] gi|91714687|gb|ABE54613.1| ATPase FliI/YscN [Shewanella denitrificans OS217] Length = 446 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 137/318 (43%), Positives = 203/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G P+DG +L + + P ++R+ + + G+R I+ + GQ Sbjct: 106 GRVLDGNGLPLDGLGALNTDQHASRHGPSINP-LSRRAITEPLDVGVRAINAMLTVGKGQ 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221 R+G+FAGSG+GKS LL M R D +++ LVGERGREV+EFIE+ LG++ + +SVVV Sbjct: 165 RMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERGREVKEFIEEILGEHGRARSVVVA 224 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R A T+ IAEYF G NVLL++DS+TR+A + RE+A GE P +G Sbjct: 225 APADTSPLMRLRACETSTRIAEYFRDLGYNVLLLMDSLTRYAQAQREVALAVGEPPATKG 284 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LPRL+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 285 YPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRR 344 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G YP +D +S+SR+A S + + + + + +++ RD+ IG Y G D Sbjct: 345 LADSGHYPAIDIESSISRVAPMVISNEHLEAMRRVKQMYSMYQQNRDLISIGAYAQGSDP 404 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A+ P + FL+Q Sbjct: 405 RIDNAIRLQPAMNAFLRQ 422 >gi|308064174|gb|ADO06061.1| flagellum-specific ATP synthase [Helicobacter pylori Sat464] Length = 434 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + ++ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIQKKALMEQFLTQDENALQPFEQSFQQLEEILR 434 >gi|292492384|ref|YP_003527823.1| ATPase, FliI/YscN family [Nitrosococcus halophilus Nc4] gi|291580979|gb|ADE15436.1| ATPase, FliI/YscN family [Nitrosococcus halophilus Nc4] Length = 480 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 137/318 (43%), Positives = 201/318 (63%), Gaps = 4/318 (1%) Query: 104 RVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 RV++ G+P+DG L +S++ P + RQ + + G+ I+ + GQ Sbjct: 118 RVLDGGGRPLDGLGPLRTPHHVSLDGQPINP--LARQPIREPLDVGVAAINGLITIGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M R D +++ L+GERGREV+EFIE LG + L +SVVV Sbjct: 176 RMGLFAGSGVGKSILLGMMTRYAKADVIVVGLIGERGREVQEFIESTLGPEGLARSVVVA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +D SP++R + A +IAEYF +G VLL++DS+TRFAH+ RE+A GE P RG Sbjct: 236 TPADHSPLMRLHGAMLATSIAEYFRDQGRQVLLLMDSLTRFAHAQRELALAIGEPPATRG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+++P+L+ER G G+ITA +VL +GD+ NDP+AD+ R+ILDGHIVL+R Sbjct: 296 YPPSVFAKVPQLVERAGNGRSGSGSITAFYTVLTEGDDANDPVADAARAILDGHIVLSRR 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D ASVSR+ + + + ++ + +++ RD+ +G YR G D Sbjct: 356 LAEAGHYPAIDIEASVSRVMSQITTPEHRQAAQQFKQIYSLYQQNRDLISVGAYRRGGDP 415 Query: 402 ILDKAVHQVPIIYDFLKQ 419 LD+A+ + P FL+Q Sbjct: 416 RLDEAIDRQPRFQTFLQQ 433 >gi|315453781|ref|YP_004074051.1| flagellum-specific ATP synthase [Helicobacter felis ATCC 49179] gi|315132833|emb|CBY83461.1| flagellum-specific ATP synthase [Helicobacter felis ATCC 49179] Length = 436 Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 155/398 (38%), Positives = 231/398 (58%), Gaps = 7/398 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWC 102 +GD V V +G + LG V+ + P E +GD V P Sbjct: 40 VGDVVKVERGDGKECLGMVVVVEQTQFGFAPFSFVEGCKVGDRVLFVKEGLSFPVGEGLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG P+D + + +M + ++R +++ F G++ ID GQ Sbjct: 100 GRVLDPLGNPLD-ELGFVRASAFAPVMVEPMKPLDRGVIDEPFGVGVKSIDALLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFI L NL +V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMVVRGCSAPIKVIALIGERGREIPEFIHKNLQGNLDNTVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL ++DSITRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGHDVLFMMDSITRFAMAQREIGLAMGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S + LP+L+ER G EK KG+ITA +VLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALTLLPQLMERAG-KEKNKGSITAFFTVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL-IGGYRPGVDL 401 + G YPP++ L S SR++ K SA E L + +H + ++ + IG Y+PG D Sbjct: 338 TDHGIYPPINILNSASRVS-KEVSATEHMLAARKFRKLHALLKENEVLIRIGSYQPGFDA 396 Query: 402 ILDKAVHQVPIIYDFLKQSPSDL-SSEDVFQEITKKLQ 438 LD+A+ + + F+ Q ++ S Q++ +Q Sbjct: 397 DLDEAIAKKAGMEAFMLQEEEEIVPSNTSIQQLIALMQ 434 >gi|13447716|gb|AAK26715.1|AF200363_23 EscN [Escherichia coli] gi|18034520|gb|AAL57542.1|AF453441_26 EscN [Escherichia coli] Length = 446 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 150/372 (40%), Positives = 215/372 (57%), Gaps = 3/372 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P+ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHISGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMG 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 SNITAPYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAE+F +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LL Sbjct: 244 AFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLL 303 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ ++ + + LI ++ + IG Y G D DKA+ I Sbjct: 362 LSASRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPGADKAIKNRKAIQ 421 Query: 415 DFLKQSPSDLSS 426 F++QS D+SS Sbjct: 422 SFIQQSTKDISS 433 >gi|15646029|ref|NP_208211.1| flagellum-specific ATP synthase [Helicobacter pylori 26695] gi|2493149|sp|O07025|FLII_HELPY RecName: Full=Flagellum-specific ATP synthase gi|2314594|gb|AAD08462.1| flagellar export protein ATP synthase (fliI) [Helicobacter pylori 26695] Length = 434 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + S+ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEIFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQTRSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434 >gi|213609479|ref|ZP_03369305.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|289827346|ref|ZP_06545992.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 341 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 151/334 (45%), Positives = 206/334 (61%), Gaps = 11/334 (3%) Query: 103 GRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRVI+ G+P+DG D K +M PPAM RQ + + TGIR ID Sbjct: 7 GRVIDGFGRPLDGCELPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCG 61 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SV 218 GQR+G+F+ G+GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V Sbjct: 62 EGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCV 121 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +VVATSD + R A A TIAE+F G V+L+ DS+TR+A + REIA +GE V Sbjct: 122 IVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAV 181 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 + YP VFS LPRLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL Sbjct: 182 SGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVL 239 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D LA++SR+ S + ++L + L + ++E + IG Y+ G Sbjct: 240 SRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRG 299 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 VD DKA+ P I FL+QS ++ ++ E Sbjct: 300 VDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIE 333 >gi|208435290|ref|YP_002266956.1| flagellum-specific ATP synthase [Helicobacter pylori G27] gi|208433219|gb|ACI28090.1| flagellum-specific ATP synthase [Helicobacter pylori G27] Length = 434 Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 146/337 (43%), Positives = 209/337 (62%), Gaps = 3/337 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILK 434 >gi|320324513|gb|EFW80590.1| type III secretion component, putative [Pseudomonas syringae pv. glycinea str. B076] gi|320328367|gb|EFW84370.1| type III secretion component, putative [Pseudomonas syringae pv. glycinea str. race 4] gi|330882192|gb|EGH16341.1| type III secretion component [Pseudomonas syringae pv. glycinea str. race 4] Length = 442 Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 163/408 (39%), Positives = 226/408 (55%), Gaps = 9/408 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G + SI V + V +G+ V + G + +VI + D + P+G E + Sbjct: 26 GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139 S + G+ + GRVI+ +G+ +DG K + + PPA +RQ Sbjct: 84 STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTAKLGMQHYPLHAEPPAPFSRQ 143 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ K GIR ID L GQR+G+F G+GKS+LL+ R+ D ++I L+GERG Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203 Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVRE +E L + ++V VVATSD R A A T+AEY +G NVLL++DS Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI GE P RGYP S FS LPRLLER GP + G+ITA+ +VL +GD Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 DP+A+ RSILDGHIVL+ LA+ +P +D L S SRL D +A+ + L S L Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRHLASRLRE 381 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 LI R +E + +G Y G D I D+A+ + I FL+Q PS+ S Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSPIEAFLRQPPSEHDS 429 >gi|217425420|ref|ZP_03456914.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 576] gi|217391671|gb|EEC31699.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia pseudomallei 576] Length = 449 Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 159/413 (38%), Positives = 234/413 (56%), Gaps = 9/413 (2%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77 VV+ G + + V+ L V LG+ + + L +V+ D+ + P Sbjct: 29 VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E+IS V GR I GRVI+ LG+P+DG L L +++ P M Sbjct: 87 LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLVSETLQ-PLIAAPPEPM 145 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D +I+L+G Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205 Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE LG + +SVVV ATSD S + R A A IAEYF +G VLL+ Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ITA+ +VL Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ + + Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + L+ + E + IG Y+ G + + D+A+ + I F Q D ++ + Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAE 436 >gi|238028890|ref|YP_002913121.1| flagellum-specific ATP synthase FliI [Burkholderia glumae BGR1] gi|237878084|gb|ACR30417.1| Flagellum-specific ATP synthase FliI [Burkholderia glumae BGR1] Length = 480 Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 144/322 (44%), Positives = 202/322 (62%), Gaps = 10/322 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A G+P+D LG +L + + + R+ + G+R I+ + GQ Sbjct: 140 GRVVDASGRPLDRLGPLGS-ELDAPLSAPTINPLEREPIHHVLDVGVRAINALLTVGRGQ 198 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 199 RMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVA 258 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P +G Sbjct: 259 APADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKG 318 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 319 YPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 378 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSA--DEKKL--VSSLTHLIHRFEETRDIRLIGGYRP 397 LAE G YP +D S+SR A +A D++ L V ++ R++ RD+ +G Y Sbjct: 379 LAEAGHYPAIDIEQSISR----AMTALIDDRHLDRVRRFKQMLSRYQRNRDLIAVGAYAA 434 Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419 G D LD+A+ P I FL+Q Sbjct: 435 GRDAQLDRAIALYPRIEAFLQQ 456 >gi|238751778|ref|ZP_04613266.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380] gi|238710049|gb|EEQ02279.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380] Length = 454 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 145/334 (43%), Positives = 202/334 (60%), Gaps = 3/334 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + + I + P + R +E+ G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPETSYCAPLITPPINP-LQRTAIEQVLDVGVRTINSLLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 296 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + V L+ F+ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEIT 434 +LDKA+ P + FL+Q + SS ED Q +T Sbjct: 416 LLDKAIALYPQMEIFLQQGMFERSSYEDACQHLT 449 >gi|297530603|ref|YP_003671878.1| flagellar protein export ATPase FliI [Geobacillus sp. C56-T3] gi|297253855|gb|ADI27301.1| flagellar protein export ATPase FliI [Geobacillus sp. C56-T3] Length = 422 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 151/363 (41%), Positives = 214/363 (58%), Gaps = 5/363 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ + V + P I+ G V GR + G V++ LG+P+DG Sbjct: 42 AEVVGFHEQHVLLMPFSATTHIAPGCFVEATGRPLEVHVGDALIGMVLDPLGQPLDGS-L 100 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L G + + P + R + + + GIRVID + GQR+G+FAGSG+GKSTL+ Sbjct: 101 LPPGLKPVSVERDPPNPLVRPPIVEPLEVGIRVIDSLLAVGKGQRVGIFAGSGVGKSTLM 160 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 M AR D +I+L+GERGREVREF+E LG D L +SVVVVATSD+ ++R T Sbjct: 161 GMIARHTSADVNVIALIGERGREVREFLERDLGPDGLARSVVVVATSDQPALMRVKGAYT 220 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G +V+L++DS+TR A + REI GE P +GY SVF+ LP+LLER Sbjct: 221 ATAIAEYFRDQGADVMLMMDSVTRVAMAQREIGLAVGEPPTTKGYTPSVFALLPKLLERA 280 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G G ITA +VLVDGD+ N+PIAD+VR ILDGH VL R LA +G YP ++ L SV Sbjct: 281 G--TNASGTITAFYTVLVDGDDMNEPIADAVRGILDGHFVLERQLANKGHYPAINVLKSV 338 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ SA+ ++ + L+ + ++ D+ IG Y+ G +D+A+ P + F Sbjct: 339 SRVMPHVISAEHREAANRFRRLLSTYIDSEDLIQIGAYKRGSSQEIDEAIEFYPQMMAFC 398 Query: 418 KQS 420 +Q+ Sbjct: 399 RQN 401 >gi|91795003|ref|YP_564654.1| ATPase FliI/YscN [Shewanella denitrificans OS217] gi|91717005|gb|ABE56931.1| ATPase FliI/YscN [Shewanella denitrificans OS217] Length = 445 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 141/338 (41%), Positives = 209/338 (61%), Gaps = 3/338 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG+P+D L S P + RQ + + GIR I+ P+ GQ Sbjct: 99 GRVLDGLGQPLDLLGKLTGVQQQTPSNSSYNPLL-RQPISQALDVGIRAINSLLPIGRGQ 157 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FAGSG+GKS LL M R D V++ L+GERGREVREFIE LG+ K++VV+ Sbjct: 158 RLGLFAGSGVGKSMLLGMMTRFTEADVVVVGLIGERGREVREFIEQTLGEEGRKRAVVIA 217 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D +P++R A + + IA F +G VLL++DS+TR+A + REIA + GE P +G Sbjct: 218 APADTTPLMRLRAMVLSHEIACGFRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKG 277 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP S F++LP L+E G + +G +TA +VL +GD+ DP+AD+ R+ILDGH+VL+R Sbjct: 278 YPPSAFAKLPHLVEMAGNGQHPQGTLTAFYTVLTEGDDQQDPVADAARAILDGHVVLSRK 337 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE+G +P +D ASVSRLA + S D + HL+ R+ E R++ +GGY+ G D Sbjct: 338 LAEQGHFPAIDINASVSRLATQIASQDNLSQSHVVRHLLSRYNEVRELLPLGGYQAGHDQ 397 Query: 402 ILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438 +D AV I FL+Q ++ +S E ++ + ++ Sbjct: 398 EMDLAVRHYRDIAAFLRQHMNENISREASLTQLAQLME 435 >gi|300693367|ref|YP_003749340.1| flii: flagellar biosynthesis protein; flagellum-specific ATP synthase [Ralstonia solanacearum PSI07] gi|299075404|emb|CBJ34699.1| FliI: Flagellar Biosynthesis protein; flagellum-specific ATP synthase [Ralstonia solanacearum PSI07] Length = 481 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 142/325 (43%), Positives = 200/325 (61%), Gaps = 9/325 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLC 159 GRV++A G+P+DG LG + + S P +N R+ +E G+R I+ + Sbjct: 138 GRVVDANGEPLDGKGPLGTHE-ELAWGSLAPAPLNPLKRKSIEHVLDVGVRAINGLLTVG 196 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218 GQR+G+FAGSG+GKS LL M AR D V++ L+GERGREV+EFI++ LGD L +S Sbjct: 197 QGQRLGLFAGSGVGKSVLLGMMARYTQADVVVVGLIGERGREVKEFIDEILGDEGLARSA 256 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP++R A TIAEYF +G NVLLI+DS+TR+A + REIA GE P Sbjct: 257 VVAAPADNSPLMRLQGAAYAHTIAEYFRDRGCNVLLIVDSLTRYAMAQREIALAIGEPPA 316 Query: 279 ARGYPTSVFSELPRLLERIG----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +GYP S F++LP L+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDG Sbjct: 317 TKGYPPSAFAKLPALVERAGNGMVDATGRGGSITAFYTVLAEGDDQQDPIADAARAILDG 376 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 H VL+R LAE+G YP +D S+SR+ ++ L R++ RD+ +G Sbjct: 377 HFVLSRKLAEQGHYPAIDIEQSISRVMSAIVPREQLDAARRFKQLYARYQRNRDLIAVGA 436 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D + D+A+ + P + FL+Q Sbjct: 437 YARGSDPMTDQAIARYPNMEGFLQQ 461 >gi|149928159|ref|ZP_01916405.1| flagellar biosynthesis/type III secretory pathway ATPase FliI [Limnobacter sp. MED105] gi|149823144|gb|EDM82382.1| flagellar biosynthesis/type III secretory pathway ATPase FliI [Limnobacter sp. MED105] Length = 468 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 147/341 (43%), Positives = 202/341 (59%), Gaps = 13/341 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPP----AMNRQRVEKGFKTGIRVIDIFTPL 158 GRV+++ G+P+D G+L E S + + R+ + + G+R I+ + Sbjct: 124 GRVVDSNGRPLDT-----LGELKFEKRSPLAARPINPLEREPITEPLDVGVRAINALLTV 178 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 GQRIG+ AGSG+GKS LL M AR D+V++ L+GERGREV+EFIE LG+ LK+S Sbjct: 179 GRGQRIGLMAGSGVGKSVLLGMMARYTKADRVVVGLIGERGREVKEFIEQILGEEGLKRS 238 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VV+ A +D SP+LR +AE+F +G NVL+I+DS+TR+A + REIA GE P Sbjct: 239 VVIAAPADVSPLLRMQGAAYTQVVAEHFRDQGHNVLMIMDSLTRYAMAQREIALAIGEPP 298 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP SVF++LP L+ER G K G+ITA +VL +GD+ DPIADS R+ILDGHIV Sbjct: 299 ATKGYPPSVFAKLPTLVERAGNGRKGAGSITAFYTVLTEGDDQQDPIADSARAILDGHIV 358 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R LAE G YP +D S+SR A L R + RD+ +G Y P Sbjct: 359 LSRQLAESGHYPAIDIEQSISRAMHNIVPAGHLNAARGLKAAFSRVQRNRDLITVGAYSP 418 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 G D LD ++ P I + L+QS + +S F E LQ Sbjct: 419 GADPQLDHSLALYPKIENLLQQSMLESAS---FDEALAGLQ 456 >gi|161503491|ref|YP_001570603.1| type III secretion system ATPase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864838|gb|ABX21461.1| hypothetical protein SARI_01567 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 433 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 150/337 (44%), Positives = 210/337 (62%), Gaps = 8/337 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ G+P+DG + + M PPAM R+ + + TGIR ID GQ Sbjct: 99 GRVIDGFGRPLDGSELPEVCWKDYDAMP--PPAMVRRPMTQPLMTGIRAIDSVATCGEGQ 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221 R+G+F+ G+GKSTLL+M + D ++ L+GERGREVREFI+ L ++ K+ V+VV Sbjct: 157 RVGIFSAPGVGKSTLLAMLCNAPGADVNVLVLIGERGREVREFIDFTLTKESRKRCVIVV 216 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD + R A A TIAE+F G V+L+ DS+TR+A + REIA +GE V+ Sbjct: 217 ATSDRPALERVRALFVATTIAEFFRDHGKRVVLLADSLTRYARAAREIALAAGETAVSGE 276 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP VFS LPRLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R Sbjct: 277 YPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRR 334 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D LA++SR+ S + ++L ++L + +++ + IG Y+ GVD Sbjct: 335 LAEMGHYPAIDVLATLSRVFPAVTSPEHRQLATTLRRHLALYQDVELLIRIGEYQRGVDA 394 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 DKA+ P I FL+QS ++ ++ E KLQ Sbjct: 395 AADKAIDTYPNICTFLRQSKDEVCGPELLIE---KLQ 428 >gi|167567954|ref|ZP_02360870.1| type III secretion system ATPase [Burkholderia oklahomensis EO147] gi|167573172|ref|ZP_02366046.1| type III secretion system ATPase [Burkholderia oklahomensis C6786] Length = 449 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 154/377 (40%), Positives = 224/377 (59%), Gaps = 8/377 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ D+ + P +IS V G I GRVI+ LG+P+DG + Sbjct: 70 EVVGFTRDVALLSPFSQLGQISRATQVIGLGHPLSIPVGDALLGRVIDGLGEPLDGGPPI 129 Query: 120 GKGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 +++ ++ PP M+R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL Sbjct: 130 ASE--TLQPLTAAPPDPMSRRMIDVPMPTGVRVVDAMMTLGEGQRMGIFAPAGVGKSTLL 187 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 MFAR D +I+L+GERGREVREF+E LG D + +SVVV ATSD S + R A Sbjct: 188 GMFARGAACDVNVIALIGERGREVREFVELILGPDGMARSVVVCATSDRSSMERAKAAYA 247 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER Sbjct: 248 ATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERA 307 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G E G+ITA+ +VL + D+ +DP+A+ VR ILDGH++L+R +A + +YP +D LAS+ Sbjct: 308 G--MGETGSITALYTVLAEDDSGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLASL 365 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + L+ + E + IG Y+ G + + D+A+ + I F Sbjct: 366 SRVMPLVVDDGHMRATARIRELMAQHREVEVLLQIGEYKAGANPLADEAIAKADAIRAFF 425 Query: 418 KQSPSDLS-SEDVFQEI 433 Q D S +EDV + Sbjct: 426 SQRTDDFSAAEDVVARL 442 >gi|315585806|gb|ADU40187.1| H(+)-transporting two-sector ATPase [Helicobacter pylori 35A] Length = 434 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 156/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + ++ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|138894743|ref|YP_001125196.1| flagellum-specific ATP synthase [Geobacillus thermodenitrificans NG80-2] gi|196247636|ref|ZP_03146338.1| flagellar protein export ATPase FliI [Geobacillus sp. G11MC16] gi|134266256|gb|ABO66451.1| Flagellar-specific ATP synthase [Geobacillus thermodenitrificans NG80-2] gi|196212420|gb|EDY07177.1| flagellar protein export ATPase FliI [Geobacillus sp. G11MC16] Length = 423 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 152/379 (40%), Positives = 224/379 (59%), Gaps = 7/379 (1%) Query: 45 LGDFV-VHQGKNSDNL-GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACW 101 +GD +H+ + +V+ + V + P I+ G LV G+ + Sbjct: 25 IGDLCYIHETSGGRKIPAEVVGFHEQHVLLMPFSSMAHIAPGCLVEATGKPLEVYVGDAL 84 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 G V++ +G+P+DG +L G + + P + R + + + G+RVID + G Sbjct: 85 IGTVLDPIGRPLDGS-ALPLGLKPVSVERDPPNPLARPPIAEPLEVGVRVIDSLLAVGKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKSTL+ M AR D +I+L+GERGREVREF+E LG + L +SVVV Sbjct: 144 QRVGIFAGSGVGKSTLMGMIARRTSADVNVIALIGERGREVREFLERDLGPEGLARSVVV 203 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 VATSD+ ++R TA IAEYF +G +V+L++DS+TR A + REI GE P + Sbjct: 204 VATSDQPALMRVKGAYTATAIAEYFRDQGADVMLMMDSVTRVAMAQREIGLAVGEPPTTK 263 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GY SVF+ LP+LLER G G ITA +VLVDGD+ N+PIAD+VR ILDGH VL R Sbjct: 264 GYTPSVFALLPKLLERAG--TNASGTITAFYTVLVDGDDMNEPIADAVRGILDGHFVLER 321 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LA +G+YP ++ L SVSR+ SA+ ++ + + L+ + ++ D+ IG Y+ G Sbjct: 322 QLANKGQYPAINVLKSVSRVMPHIISAEHREAANRVRRLLSTYIDSEDLIQIGAYKHGSS 381 Query: 401 LILDKAVHQVPIIYDFLKQ 419 +D+A+ P I F +Q Sbjct: 382 REIDEAIQFYPQIMAFCRQ 400 >gi|109946732|ref|YP_663960.1| flagellum-specific ATP synthase [Helicobacter acinonychis str. Sheeba] gi|109713953|emb|CAJ98961.1| flagellum-specific ATP synthase [Helicobacter acinonychis str. Sheeba] Length = 434 Score = 262 bits (670), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 156/396 (39%), Positives = 229/396 (57%), Gaps = 7/396 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + ++ +G V+ + + P E GD V P Sbjct: 40 VGDVVKIEKSDGTECVGMVVVVEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGHNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEIFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLVPIKVIALIGERGREIPEFIEKNLQGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEEGKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 LD+A+++ ++ FL Q + L F++ K+L+ Sbjct: 398 LDEAINKKALMEQFLVQDENALQP---FEQSAKQLE 430 >gi|317010211|gb|ADU80791.1| flagellum-specific ATP synthase [Helicobacter pylori India7] Length = 434 Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 156/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + ++ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434 >gi|312883882|ref|ZP_07743599.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC BAA-2122] gi|309368340|gb|EFP95875.1| type III secretion system ATPase [Vibrio caribbenthicus ATCC BAA-2122] Length = 459 Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 149/358 (41%), Positives = 213/358 (59%), Gaps = 23/358 (6%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLS-MEIMS 130 + P+G E+ +GD + G +++ LG+P DG + GK + + Sbjct: 107 VSPLGKMHEVGVGDHLL--------------GTILDGLGRPFDG--TQGKEPSAWYPVYR 150 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PP M R+ +EK G+R ID GQR+G+FA +G GKSTLL+ RS D Sbjct: 151 DAPPPMQRKLIEKPISMGVRSIDGLLTCGEGQRMGIFAAAGGGKSTLLAKLIRSADVDVT 210 Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +++L+GERGREVREFIE LG+ + +SV+VVATSD + R A A +IAEYF +G Sbjct: 211 VLALIGERGREVREFIEHDLGEEGMARSVLVVATSDRPAMERAKAAFVATSIAEYFRDQG 270 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VLL++DS+TRFA + REI +GE P RGYP SVF+ LP+L+ER G S+K G+ITA Sbjct: 271 KRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPKLMERAGQSDK--GSITA 328 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ Sbjct: 329 LYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAMNHYPAIDVLRSASRVMNQIVDKSH 388 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ---SPSDL 424 + + + ++ ++EE + IG Y+ G D D A+ Q I FL+Q PS+L Sbjct: 389 QTSAAHMREMLAKYEEVELLIKIGEYQHGADSRADMAIAQGDDIRAFLRQGTHEPSEL 446 >gi|238798574|ref|ZP_04642051.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969] gi|238717594|gb|EEQ09433.1| Flagellum-specific ATP synthase [Yersinia mollaretii ATCC 43969] Length = 454 Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 144/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R +E+ G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 296 YPPSVFAKLPALVERAGNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + V L+ ++ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 +LDKA+ P + FL+Q + SS ED Q + Sbjct: 416 LLDKAIALYPQMEIFLQQGMYERSSYEDACQHL 448 >gi|298735620|ref|YP_003728145.1| flagellum-specific ATP synthase [Helicobacter pylori B8] gi|298354809|emb|CBI65681.1| flagellum-specific ATP synthase [Helicobacter pylori B8] Length = 434 Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + S+ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + +EI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQKEIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|1890178|emb|CAA69911.1| F0/F1-ATPase [Helicobacter pylori] Length = 434 Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + S+ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|114330755|ref|YP_746977.1| flagellar protein export ATPase FliI [Nitrosomonas eutropha C91] gi|114307769|gb|ABI59012.1| flagellar protein export ATPase FliI [Nitrosomonas eutropha C91] Length = 468 Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 140/326 (42%), Positives = 202/326 (61%), Gaps = 2/326 (0%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 IS GRV+N +G+P+D L G ++ + + + R +EK G+R I+ Sbjct: 124 ISVGPELLGRVLNGVGEPLDRLGPLQCGH-NVPLYGRPFNPLERAPIEKILDVGVRAINT 182 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-N 213 + GQR+G+FAGSG+GKS LL M AR D ++++L+GERGREV+EFIE LG+ Sbjct: 183 LLSVGRGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVALIGERGREVQEFIETILGEEG 242 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L +SVVV A +D SP++R A IAEYF +G +VLLI+DS+TRFA + REI+ Sbjct: 243 LARSVVVAAPADTSPLMRLHGAAYATAIAEYFRDEGKHVLLIMDSLTRFAMAQREISLAI 302 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF+ LP+L+ER G + G+ITA +VL + D+ NDPIAD+ R+ILD Sbjct: 303 GEPPATKGYPPSVFARLPQLVERAGNGRRGSGSITAFYTVLAENDDPNDPIADNARAILD 362 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LA+ G YP +D +S+SR+ + ++ L R++ + D+ +G Sbjct: 363 GHIVLSRHLADAGHYPAIDIESSISRVMASLVTREQLGQAQRFKALYSRYQRSHDLISVG 422 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D LD+A+ P + FL+Q Sbjct: 423 AYISGTDPQLDQAIALYPALESFLQQ 448 >gi|238784728|ref|ZP_04628732.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970] gi|238714407|gb|EEQ06415.1| Flagellum-specific ATP synthase [Yersinia bercovieri ATCC 43970] Length = 454 Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 144/333 (43%), Positives = 202/333 (60%), Gaps = 3/333 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R +E+ G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 296 YPPSVFAKLPALVERAGNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + V L+ ++ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 +LDKA+ P + FL+Q + SS ED Q + Sbjct: 416 LLDKAIALYPQMEIFLQQGMYERSSYEDACQHL 448 >gi|317486822|ref|ZP_07945638.1| type III secretion apparatus H+-transporting two-sector ATPase [Bilophila wadsworthia 3_1_6] gi|316921985|gb|EFV43255.1| type III secretion apparatus H+-transporting two-sector ATPase [Bilophila wadsworthia 3_1_6] Length = 438 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 155/380 (40%), Positives = 223/380 (58%), Gaps = 8/380 (2%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDS 118 +V+ + + P+G + IS V G P GRV+N LG PIDG Sbjct: 60 AEVVGFVKQVALLTPLGDLQGISPATEVIPTGEIHSVPVGEDLLGRVLNGLGDPIDGGPP 119 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L K + + P M R+ +++ G+RV+D GQR+G+FA +G GKSTLL Sbjct: 120 L-KPRTHYPVYADPPNPMLRKIIDRPISLGLRVLDGVLTCGEGQRMGIFAAAGGGKSTLL 178 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 S + D +++L+GERGREVREFIE+ LG + KK+V+VV+TSD S + R A T Sbjct: 179 SSIIKGCSADVCVLALIGERGREVREFIENDLGPEGRKKAVLVVSTSDRSSMERLKAAYT 238 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A +AEYF + +VLL++DS+TRF + REI +GE P RG+P SVFS LP+L+ER Sbjct: 239 ATAVAEYFRDQHKSVLLMMDSVTRFGRAQREIGLAAGEPPTRRGFPPSVFSTLPKLMERA 298 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G S+K G+ITA+ +VLV+GD+ +PIAD RSILDGHI+L+R LA YP +D ASV Sbjct: 299 GNSDK--GSITALYTVLVEGDDMTEPIADETRSILDGHIILSRKLAAANHYPAIDVQASV 356 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + KK +L ++ +F E + IG Y+ G D D A+ ++ + FL Sbjct: 357 SRVMNAIVTKEHKKAAQALRKVLAKFAEVELLVQIGEYKKGSDKEADDALARINAVNAFL 416 Query: 418 KQSPSDLSSEDVFQEITKKL 437 +Q L + F+E + L Sbjct: 417 RQG---LDEKSTFEETLQAL 433 >gi|161502906|ref|YP_001570018.1| flagellum-specific ATP synthase [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864253|gb|ABX20876.1| hypothetical protein SARI_00965 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 456 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 194/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG + + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTTETGALITPPFNP-LQRTPIEHVLDTGVRAINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + V L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + FL+Q Sbjct: 414 SDPMLDKAITLWPQLEAFLQQ 434 >gi|283832664|ref|ZP_06352405.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC 29220] gi|291072338|gb|EFE10447.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC 29220] Length = 456 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 142/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG + + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPAPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G++TA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRHLAEAGHYPAIDIEASISRAMTALISEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + FL+Q Sbjct: 414 SDPMLDKAIALWPQLEAFLQQ 434 >gi|317182625|dbj|BAJ60409.1| flagellum-specific ATP synthase [Helicobacter pylori F57] Length = 434 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + ++ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEIFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|260858262|ref|YP_003232153.1| T3SS structure protein EscN [Escherichia coli O26:H11 str. 11368] gi|257756911|dbj|BAI28413.1| T3SS structure protein EscN [Escherichia coli O26:H11 str. 11368] Length = 446 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 149/372 (40%), Positives = 215/372 (57%), Gaps = 3/372 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+++ +G+P+ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHISGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMG 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 SNITAPYLPFERSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 TA TIAE+F +G NVLL++DS+TR+A + R++ SGE V G+P SVF+ LP+LL Sbjct: 244 AFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFASLPKLL 303 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D Sbjct: 304 ERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIG 361 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 S SR+ ++ + + LI ++ + IG Y G D DKA+ I Sbjct: 362 LSASRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQ 421 Query: 415 DFLKQSPSDLSS 426 F++QS D+SS Sbjct: 422 SFIQQSTKDISS 433 >gi|108563771|ref|YP_628087.1| flagellum-specific ATP synthase [Helicobacter pylori HPAG1] gi|107837544|gb|ABF85413.1| flagellum-specific ATP synthase [Helicobacter pylori HPAG1] Length = 434 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + ++ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKNDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQIGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|6066711|emb|CAB58257.1| HrpE protein [Ralstonia solanacearum] gi|1097290|prf||2113360R hrpE gene Length = 439 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 142/327 (43%), Positives = 199/327 (60%), Gaps = 4/327 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G+P DG L + + + + P M R+ VE TG+RVID L GQ Sbjct: 104 GRVLDGHGRPADGGPPLDVVEY-VPVFANAPDPMTRRLVEHPLATGVRVIDGLATLAEGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FA +G+GKSTL+ MFAR D +I L+GERGREVREFIE LG + +++SVVV Sbjct: 163 RMGIFAPAGVGKSTLMGMFARGTECDVNVIVLIGERGREVREFIEQILGEEGMRRSVVVC 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD + + R A +AEYF +G VLL++DS+TRFA + REI +GE P RG Sbjct: 223 ATSDRTAVERAKAAYVGTAVAEYFRDQGLRVLLMMDSLTRFARAQREIGLAAGEPPTRRG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF+ELPRLLER G S G+ITA +VL + ++ NDP+A+ VR ILDGH++L+R Sbjct: 283 FPPSVFAELPRLLERAGMS--AAGSITAHYTVLAEDESGNDPVAEEVRGILDGHLILSRD 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A RYP +D L S+SR+ + D + L+ ++ E + +G Y+ G D Sbjct: 341 IAARNRYPAIDILNSLSRVMTQVMPRDHCDAAGRMRQLLAKYNEVVTLLQMGEYKEGSDP 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 + D AV + FL+Q + S D Sbjct: 401 VADAAVQWNDWMESFLRQRTDEWCSPD 427 >gi|332674186|gb|AEE71003.1| flagellar protein export ATPase FliI [Helicobacter pylori 83] Length = 434 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 156/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + ++ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGTECMGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLHARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434 >gi|332140585|ref|YP_004426323.1| flagellum-specific ATP synthase [Alteromonas macleodii str. 'Deep ecotype'] gi|327550607|gb|AEA97325.1| flagellum-specific ATP synthase [Alteromonas macleodii str. 'Deep ecotype'] Length = 444 Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 151/364 (41%), Positives = 214/364 (58%), Gaps = 9/364 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119 +V+ DI Y+ P I G V R P GRV++ G+P+DG L Sbjct: 60 EVVGFGDDITYLMPTEAVRGIVPGSRVMPLNRQSGLPVGMGLLGRVVDGNGQPLDG---L 116 Query: 120 GKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 G+ D + PP MN R+ + G+R I+ + GQR+G+FAGSG+GKS Sbjct: 117 GEIDAEARAPTTRPP-MNPLIRRPINAPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSV 175 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 LL M R D V++ LVGERGREV+EFI D L + +++VVV A +D SP++R Sbjct: 176 LLGMMTRGCEADVVVVGLVGERGREVKEFIHDILTEEERQRAVVVAAPADTSPLMRLKGC 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 TAVTIAEYF KG VLL++DS+TR+A + REIA GE P +GYP SVF+ LP L+E Sbjct: 236 ETAVTIAEYFRDKGMKVLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G + +G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R+LA+ G YP +D A Sbjct: 296 RAGNGSERQGSITAFYTVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEA 355 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR+ S + + + + + +++ +D+ IG Y G D +D A+ P I Sbjct: 356 SISRVMPMVVSEEHQLMARRIRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINA 415 Query: 416 FLKQ 419 L+Q Sbjct: 416 LLQQ 419 >gi|227355983|ref|ZP_03840375.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906] gi|227163971|gb|EEI48873.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906] Length = 457 Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 151/365 (41%), Positives = 210/365 (57%), Gaps = 23/365 (6%) Query: 76 GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP- 134 G G ++ LGD + GRV++ G P+DG L D S PP Sbjct: 104 GEGRQLPLGDALL--------------GRVLDGSGDPLDG---LPPPDTSYRAPLITPPI 146 Query: 135 -AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 + R + G+R I+ + GQR+G+FAGSG+GKS LL M AR D +++ Sbjct: 147 NPLQRTPITDVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARFTQADVIVVG 206 Query: 194 LVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252 L+GERGREV++FIE+ LG + L +SVVV A +D SP+LR A IAE F +G +V Sbjct: 207 LIGERGREVKDFIENILGKEGLARSVVVAAPADVSPLLRMQGASYATRIAEDFRDRGKHV 266 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LLI+DS+TR++ + REIA GE P +GYP SVF++LP L+ER G G+ITA + Sbjct: 267 LLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGVDGGGSITAFYT 326 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 VL +GD+ DPIADS R+ILDGHIVL+RSLAE G YP +D AS+SR + Sbjct: 327 VLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTSLIDKTHYRR 386 Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 V L+ ++ RD+ +G Y G D +LDKA+ P + FL+Q D+ + +Q Sbjct: 387 VQVFKQLLSSYQRNRDLINVGAYAAGSDPMLDKAIALYPSLAKFLQQ---DIQEQCSYQH 443 Query: 433 ITKKL 437 ++L Sbjct: 444 ACEQL 448 >gi|217034565|ref|ZP_03439974.1| hypothetical protein HP9810_874g22 [Helicobacter pylori 98-10] gi|216942985|gb|EEC22468.1| hypothetical protein HP9810_874g22 [Helicobacter pylori 98-10] Length = 434 Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + ++ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISEPQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILK 434 >gi|297621830|ref|YP_003709967.1| type III secretion cytoplasmic ATPase SctN [Waddlia chondrophila WSU 86-1044] gi|297377131|gb|ADI38961.1| type III secretion cytoplasmic ATPase SctN [Waddlia chondrophila WSU 86-1044] Length = 438 Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 159/386 (41%), Positives = 228/386 (59%), Gaps = 15/386 (3%) Query: 60 GQVIRINLDIVYICPVGIGEEISLG---DLVFHWGRFRISPSACWCGRVINALGKPIDGD 116 +V+ D V++ P +GE +G +++ + GRV+N LG+P+D + Sbjct: 58 AEVVGFTRDEVFLSP--LGEMTGIGPSSEVIPTRLPLHVKVGDALLGRVLNGLGEPLDTN 115 Query: 117 DSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 KG L + ++ P + RQRV + G+RVID GQR+G+FA +G Sbjct: 116 T---KGPLVLNETAPVIQSPPDPLKRQRVSEPISVGVRVIDGTLTTGLGQRVGIFAAAGG 172 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILR 231 GKSTLL M AR+ D +ISLVGERGRE+R+FIE LG + LKKSV+V++TSD+S LR Sbjct: 173 GKSTLLGMIARNADADINVISLVGERGRELRDFIEKDLGPEGLKKSVLVISTSDQSAQLR 232 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A IAEYF KG +V+L++DS+TRFA +IRE+ +GE P GY SVFS LP Sbjct: 233 LNAAYVATAIAEYFRDKGKSVILMMDSVTRFARAIREVGLAAGEPPARAGYTPSVFSTLP 292 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 +LLER G S + G+ITA ++LV GD+ N+P+AD VRSILDGHI+L+ LA + YP V Sbjct: 293 KLLERSGRS--DVGSITAFYTILVAGDDMNEPVADEVRSILDGHIILSAELAHKYHYPAV 350 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D LAS SR+ S + L + ++ +++ + IG Y+ G D D A+ + Sbjct: 351 DVLASKSRVMQTIVSEEHLSLAGKINEVLANYKKNELLIKIGEYKRGSDKAGDFAIDHID 410 Query: 412 IIYDFLKQSPSDLSSEDVFQEITKKL 437 + +FLKQ + S D ++ + L Sbjct: 411 KVNNFLKQGIEEECSWDETMQLLRSL 436 >gi|317011553|gb|ADU85300.1| flagellum-specific ATP synthase [Helicobacter pylori SouthAfrica7] Length = 434 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 157/396 (39%), Positives = 227/396 (57%), Gaps = 7/396 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + S+ +G V+ + + P E GD V P Sbjct: 40 VGDVVKIEKSDGSECVGMVVVVEKEQFGFTPFNFIEGSRAGDKVLFLKEGLNFPVGHNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+V A Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLQGDLSSCVLVAA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEEGKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPPV+ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPVNILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L F++ K+L+ Sbjct: 398 LDEAISKKALMEQFLAQDENALQP---FEQSVKQLE 430 >gi|197285492|ref|YP_002151364.1| flagellum-specific ATP synthase [Proteus mirabilis HI4320] gi|194682979|emb|CAR43407.1| flagellum-specific ATP synthase [Proteus mirabilis HI4320] Length = 457 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 151/365 (41%), Positives = 210/365 (57%), Gaps = 23/365 (6%) Query: 76 GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP- 134 G G ++ LGD + GRV++ G P+DG L D S PP Sbjct: 104 GEGRQLPLGDALL--------------GRVLDGSGDPLDG---LPPPDTSYRAPLITPPI 146 Query: 135 -AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 + R + G+R I+ + GQR+G+FAGSG+GKS LL M AR D +++ Sbjct: 147 NPLQRTPITDVLDVGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARFTQADVIVVG 206 Query: 194 LVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252 L+GERGREV++FIE+ LG + L +SVVV A +D SP+LR A IAE F +G +V Sbjct: 207 LIGERGREVKDFIENILGKEGLARSVVVAAPADVSPLLRMQGASYATRIAEDFRDRGKHV 266 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LLI+DS+TR++ + REIA GE P +GYP SVF++LP L+ER G G+ITA + Sbjct: 267 LLIMDSLTRYSMAQREIALAVGEPPATKGYPPSVFAKLPALVERAGNGVDGGGSITAFYT 326 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 VL +GD+ DPIADS R+ILDGHIVL+RSLAE G YP +D AS+SR + Sbjct: 327 VLTEGDDQQDPIADSARAILDGHIVLSRSLAESGHYPAIDIEASISRAMTSLIDKTHYRR 386 Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 V L+ ++ RD+ +G Y G D +LDKA+ P + FL+Q D+ + +Q Sbjct: 387 VQVFKQLLSSYQRNRDLINVGAYATGSDPMLDKAIALYPSLAKFLQQ---DIQEQCSYQH 443 Query: 433 ITKKL 437 ++L Sbjct: 444 ACEQL 448 >gi|163856455|ref|YP_001630753.1| flagellar biosynthesis ATPase FliI [Bordetella petrii DSM 12804] gi|163260183|emb|CAP42485.1| flagellar biosynthesis ATPase FliI [Bordetella petrii] Length = 482 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 146/335 (43%), Positives = 202/335 (60%), Gaps = 6/335 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L +L+ + P ++R ++ G+R I+ + Sbjct: 133 ALLGRVLDGAGRPLDGLGPLTGAELAPLSAHPINP-LSRAPIDTVLDVGVRAINGLLTVG 191 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG D L +SV Sbjct: 192 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKEFIEHNLGADGLARSV 251 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP+LR A +AE+F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 252 VVAAPADVSPLLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPA 311 Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334 +GYP SVF+ LP L+ER G P K G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 312 TKGYPPSVFARLPALVERAGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 371 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 H+VL+R LAE G YP +D AS+SR S + +V + R++ RD+ +G Sbjct: 372 HVVLSRHLAEAGHYPAIDIEASISRAMTSLISDQQYAVVRRFKQTLSRYQRNRDLIAVGA 431 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 Y G D LD A+ + P + FL+Q D S D Sbjct: 432 YSAGNDPQLDDAIARYPRLEAFLQQDIGDSVSYDA 466 >gi|119953087|ref|YP_945296.1| flagellum-specific ATP synthase [Borrelia turicatae 91E135] gi|119861858|gb|AAX17626.1| flagellum-specific ATP synthase [Borrelia turicatae 91E135] Length = 436 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 154/387 (39%), Positives = 235/387 (60%), Gaps = 6/387 (1%) Query: 36 VTCLSQYVCLGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-F 93 V L +GD ++ Q +V+ +N V + + I +GD V G+ Sbjct: 33 VESLGPKCGIGDLCLIEQRSGKKIYAEVLGLNGSFVNLMAYEGFDGIEIGDQVCSLGKKL 92 Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 +I+ S GRVI++LG+PID S + P ++R + TG++V+D Sbjct: 93 QINLSDELLGRVIDSLGRPIDNKGQFFCNYYKELSFSNINP-LSRGVFSEQIVTGVKVLD 151 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 F P+ GQR+G+F+G+G+GKSTLL M A++ D +I+ +GERGRE+ EFI+ LG+ Sbjct: 152 GFLPVAKGQRVGIFSGAGVGKSTLLGMIAKNSKADVNVIAFIGERGRELNEFIKYDLGEE 211 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 K+SV++V+TSD SPI R TA IAEYF G +V+L+ DSITRFA++ REI+ + Sbjct: 212 CFKRSVLIVSTSDASPIARYKGAYTATLIAEYFRDCGMDVMLLFDSITRFANAKREISLS 271 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE P +GYP SVF E+P LLER G + KG+IT +VLV+GD+ +PIAD+++++L Sbjct: 272 MGEPPATKGYPPSVFVEIPILLERSGLN--SKGSITGFYTVLVEGDDFTEPIADNMKAVL 329 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHI+L+R L++ G YP V+ L+S SR + + +++KL+S + +L+ ++ D+ Sbjct: 330 DGHIILDRDLSDRGIYPSVNILSSTSRSLHRIVNFEKQKLISKIRNLLSIYKSYEDLIKT 389 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419 G Y G + +D AV + P I DFL Q Sbjct: 390 GIYIKGSNKEVDLAVAKYPKIIDFLSQ 416 >gi|317179598|dbj|BAJ57386.1| flagellum-specific ATP synthase [Helicobacter pylori F30] Length = 434 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 156/397 (39%), Positives = 229/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + ++ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEIFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434 >gi|13475302|ref|NP_106866.1| ATP synthase in type III secretion system, hrcN [Mesorhizobium loti MAFF303099] gi|14026053|dbj|BAB52652.1| ATP synthase in type III secretion system; HrcN [Mesorhizobium loti MAFF303099] Length = 452 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 155/374 (41%), Positives = 220/374 (58%), Gaps = 8/374 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSL 119 +VI + D V + P+G +S V GR R P GRVI++ +P+DG + Sbjct: 75 EVIGLLDDGVLLTPIGDLVGLSSRAEVVATGRMREVPVGNDLLGRVIDSRCRPLDGKGQI 134 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + + + P M R+ +E+ G+RV+D GQRIG++ G GKSTLLS Sbjct: 135 ETTE-TRPLHGRAPNPMTRRMIERPLPLGVRVLDGLLTCGEGQRIGIYGEPGGGKSTLLS 193 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238 + D VI++L+GERGREVREFIE +LG+ L+++VVVV TSD S + R A Sbjct: 194 QIVKGAAADVVIVALIGERGREVREFIERHLGEEGLRRAVVVVETSDRSAVQRAQCAPMA 253 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +AEYF +G V L+LDS+TRF ++REI +GE P RG+P SVFS LP LLER G Sbjct: 254 TALAEYFREQGLRVALMLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFSMLPGLLERAG 313 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 SE+ G+ITA +VLV+GD DPIA+ R ILDGH+VL+R++A +P +D L S S Sbjct: 314 MSER--GSITAFYTVLVEGDGTGDPIAEESRGILDGHVVLSRAIAARSHFPAIDVLQSRS 371 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ D S +K S L+ R ET + +G Y+ G D + D+AV + + +FL+ Sbjct: 372 RVMDAVVSRTHRKAASFFRELLSRHAETEFLINVGEYKQGGDPLTDRAVESIDELREFLR 431 Query: 419 QSPSDLSSEDVFQE 432 QS ++S F+E Sbjct: 432 QSEDEISG---FEE 442 >gi|34498058|ref|NP_902273.1| type III secretion system ATPase [Chromobacterium violaceum ATCC 12472] gi|34103913|gb|AAQ60273.1| probable type III secretion system ATP synthase [Chromobacterium violaceum ATCC 12472] Length = 444 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 154/367 (41%), Positives = 221/367 (60%), Gaps = 21/367 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSK 131 + P G ++ LGD + GRV++ LG+P+DGD+ +L + Sbjct: 93 VRPSGSPHQLRLGDFLL--------------GRVVDGLGRPLDGDELPADSELR-SLDGP 137 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P + RQ ++ G+R ID GQRIG+FA +G GKSTLL M D ++ Sbjct: 138 APNPLTRQLIDTPLPLGVRAIDGLLTCGMGQRIGIFAAAGGGKSTLLGMICDGSLADVIV 197 Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 ++L+GERGREVREF+E L + + +S+VVV+TSD + R A TA IAE+F +G Sbjct: 198 LALIGERGREVREFLEHTLSEEARSRSIVVVSTSDRPALERLKAAYTATAIAEHFRDQGK 257 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 NVLL++DS+TRFA + REI +GE A GYP S F+ LPRLLER GP+E G+IT + Sbjct: 258 NVLLMMDSLTRFARASREIGLAAGEPAAAGGYPPSFFARLPRLLERAGPAET--GSITGI 315 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GDN N+P+AD VRSILDGHIVL+R LAE YP +D ASVSR+ + SA+ + Sbjct: 316 YTVLVEGDNLNEPVADEVRSILDGHIVLSRKLAETNHYPAIDIGASVSRIMGQIVSAEHR 375 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430 + L L+ ++E + +G Y+PG D D+A+ + I FL QS ++ ++ F Sbjct: 376 QQAGKLRRLMAAYKEIELLVRVGEYQPGQDAEADEALERKDAIRQFLCQS---VTEKNDF 432 Query: 431 QEITKKL 437 +E ++L Sbjct: 433 EETLEQL 439 >gi|289624378|ref|ZP_06457332.1| type III secretion component, putative [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330868638|gb|EGH03347.1| type III secretion component [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 442 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 161/405 (39%), Positives = 225/405 (55%), Gaps = 9/405 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G + SI V + V +G+ V + G + +VI + D + P+G E + Sbjct: 26 GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139 S + G+ + GRVI+ +G+ +DG + + PPA +RQ Sbjct: 84 STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ K GIR ID L GQR+G+F G+GKS+LL+ R+ D ++I L+GERG Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203 Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVRE +E L + ++V VVATSD R A A T+AEY +G NVLL++DS Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI GE P RGYP S FS LPRLLER GP + G+ITA+ +VL +GD Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 DP+A+ RSILDGHIVL+ LA+ +P +D L S SRL D +A+ ++L S L Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 LI R +E + +G Y G D I D+A+ + I FL+Q PS+ Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSSIEAFLRQPPSE 426 >gi|56413115|ref|YP_150190.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362041|ref|YP_002141678.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56127372|gb|AAV76878.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197093518|emb|CAR58979.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 456 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 146/326 (44%), Positives = 196/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+L G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLDTGVRAINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHI L+R LAE G YP +D AS+SR + V L+ F+ RD+ +G Sbjct: 349 GHIALSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + FL+Q Sbjct: 409 AYAKGSDPMLDKAITLWPQLEAFLQQ 434 >gi|210135582|ref|YP_002302021.1| flagellum-specific ATP synthase [Helicobacter pylori P12] gi|308185180|ref|YP_003929313.1| flagellum-specific ATP synthase [Helicobacter pylori SJM180] gi|210133550|gb|ACJ08541.1| flagellar protein export ATPase FliI [Helicobacter pylori P12] gi|308061100|gb|ADO02996.1| flagellum-specific ATP synthase [Helicobacter pylori SJM180] Length = 434 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 158/397 (39%), Positives = 227/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + S+ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGSECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLVQDENALQPFEQSFQQLEEILR 434 >gi|317133485|ref|YP_004092799.1| ATPase, FliI/YscN family [Ethanoligenens harbinense YUAN-3] gi|315471464|gb|ADU28068.1| ATPase, FliI/YscN family [Ethanoligenens harbinense YUAN-3] Length = 433 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 145/324 (44%), Positives = 203/324 (62%), Gaps = 12/324 (3%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPA--MNRQRVEKGFKTGIRVIDIFT 156 GRV++ +G PIDG KG ++ E + V PA + R R+++ G++VID Sbjct: 97 MVGRVLDGVGTPIDG-----KGPIASEAHYLIDVEPANPLQRPRIKERMPLGVKVIDGLL 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLK 215 GQRIG+FAGSG+GKSTL+ M AR+ D +I+LVGERGRE+R+F+E D + + Sbjct: 152 TCGKGQRIGIFAGSGVGKSTLMGMIARNAQADVNVIALVGERGRELRDFMEKDLQAEGMA 211 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++V+VVATSD + R L A +AE+F KG NV+L++DS+TRFA + REI +GE Sbjct: 212 RTVLVVATSDRPAMARVKCALVATAVAEFFRDKGKNVMLMMDSLTRFAMAQREIGLATGE 271 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 PVARGY S+F+ +P+LLER G KG+IT + +VLV+GD+ N+P+AD+VR ILDGH Sbjct: 272 PPVARGYTPSIFAVMPKLLERSG--NFNKGSITGIYTVLVEGDDMNEPVADTVRGILDGH 329 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL R+LA YP +D LAS+SRL +L + L+ +E D+ IG Y Sbjct: 330 IVLTRALAMRNHYPAIDVLASISRLMPDIADPAHMELAGKMRRLMATYENYADLISIGAY 389 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 +PG +D A+ I FL Q Sbjct: 390 KPGSSEEVDTAIRYHKAIETFLCQ 413 >gi|307822875|ref|ZP_07653106.1| flagellar protein export ATPase FliI [Methylobacter tundripaludum SV96] gi|307736479|gb|EFO07325.1| flagellar protein export ATPase FliI [Methylobacter tundripaludum SV96] Length = 454 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 141/339 (41%), Positives = 212/339 (62%), Gaps = 7/339 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G ID L K D + + ++R+ + + G+R I+ + GQ Sbjct: 111 GRVLDGAGNAIDDKGPL-KTDAQISLNGVPINPLSRRPIREPLDVGVRAINSILSVGRGQ 169 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FAG+G+GKS LL M + D V++ L+GERGREV EF+ LG+ LK++VVVV Sbjct: 170 RMGLFAGTGVGKSVLLGMMTKFTTADVVVVGLIGERGREVNEFVLKTLGEEGLKRAVVVV 229 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 + +D P++R A L + +IAEYF +G +VLL++DS+TRFA + REIA + E P +G Sbjct: 230 SPADCPPLMRVHAALLSTSIAEYFRDQGLDVLLLMDSLTRFAQAHREIALSIDEPPATKG 289 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G ++ G+ITA +VL +GD+ NDPIAD+ R +LDGH++L+RS Sbjct: 290 YPPSVFAKLPHLVERAGNADHGGGSITAFYTVLAEGDDTNDPIADAARGVLDGHVILSRS 349 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G +P +D AS+SR+ A ++ L L +++ RD+ +G Y+PG D Sbjct: 350 LAESGHFPAIDIEASISRVMPDIIDAGHLQMARELRRLYSLYQQNRDLISVGAYQPGSDP 409 Query: 402 ILDKAVHQVPIIYDFLKQ---SPSDLSSEDVFQEITKKL 437 +DKA+ + P I DFL+Q P D++ QE+ L Sbjct: 410 RIDKAIERNPAILDFLQQDMDEPVDINRS--LQELATLL 446 >gi|302037607|ref|YP_003797929.1| ATPase FliI [Candidatus Nitrospira defluvii] gi|300605671|emb|CBK42004.1| ATPase FliI [Candidatus Nitrospira defluvii] Length = 435 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 158/376 (42%), Positives = 221/376 (58%), Gaps = 10/376 (2%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVIN 107 + +G + + +V+ D V + P+G + I G V G P GR+ + Sbjct: 42 ITREGGHGAVMAEVVGFREDRVLLMPLGEMQGIGPGSRVVMKGHVASVPVGPQMLGRIFD 101 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P+DG L + D+ + + + ++R R+ + GIR I+ GQ+IGVF Sbjct: 102 GLGHPLDGLPPL-RTDVQVPLYAPPLNPLHRARITQPVDLGIRAINALLTCGQGQKIGVF 160 Query: 168 AGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE-DYLGDNLKKSVVVVATSDE 226 AGSG+GKS LL M +R D +I+LVGERGREV+EF+E D + +S+VVVATSD+ Sbjct: 161 AGSGVGKSVLLGMISRYTQADVRVIALVGERGREVKEFLERDLTPEARARSIVVVATSDQ 220 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 P++R L A IAEYF G +VLL++DS++R A+S RE+ GE P +GY SV Sbjct: 221 PPLVRIRGALVATAIAEYFRDCGKHVLLMMDSLSRLAYSQREVGLAIGEPPTTKGYTPSV 280 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F+ LP+LLER+GP++ G+IT + +VLVDGD+ NDP+AD+VRSILDGHIVL+R LA Sbjct: 281 FAVLPKLLERVGPAQS-GGSITGLYTVLVDGDDLNDPVADAVRSILDGHIVLSRELAARN 339 Query: 347 RYPPVDPLASVSR-LADKAWSAD--EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403 +P +D L S SR + D A +LV T L R E D+ +G Y+PG L Sbjct: 340 HFPAIDILQSTSRVMRDIVTPAHYAAGRLVLERTALYRRSE---DLITLGAYKPGTSKDL 396 Query: 404 DKAVHQVPIIYDFLKQ 419 DKAV I FL+Q Sbjct: 397 DKAVSAHEGITAFLRQ 412 >gi|297380580|gb|ADI35467.1| ATPase FliI/YscN family [Helicobacter pylori v225d] Length = 434 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + ++ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLHARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|329901248|ref|ZP_08272773.1| Flagellum-specific ATP synthase FliI [Oxalobacteraceae bacterium IMCC9480] gi|327549180|gb|EGF33772.1| Flagellum-specific ATP synthase FliI [Oxalobacteraceae bacterium IMCC9480] Length = 466 Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 141/320 (44%), Positives = 197/320 (61%), Gaps = 6/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA--MNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++ G+P+D +LG + S V A + R + G+R I+ + Sbjct: 129 GRVLDGAGRPLD---TLGPLNASSAAPLNVRAANPLTRAPIIDVLDVGVRAINSMLTVGR 185 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SVV Sbjct: 186 GQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGPEGLARSVV 245 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D P++R IAE+F +G +VL+I+DS+TR+A + REIA GE P Sbjct: 246 VAAPADTPPLMRLQGAAYTTAIAEHFRDQGKHVLMIMDSLTRYAMAQREIALAIGEPPAT 305 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDGHIVLN Sbjct: 306 KGYPPSVFAKLPALVERAGNGREGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLN 365 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LAE G YP +D S+SR + + +KL L L R++ RD+ +G Y G Sbjct: 366 RQLAEAGHYPAIDIEQSISRAMHSITTPEHQKLTRRLKQLYSRYQRNRDLISVGAYSAGS 425 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D +LD+A+ I DFL+Q Sbjct: 426 DPVLDEAILLNTRIEDFLQQ 445 >gi|260776481|ref|ZP_05885376.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC BAA-450] gi|260607704|gb|EEX33969.1| flagellum-specific ATP synthase FliI [Vibrio coralliilyticus ATCC BAA-450] Length = 441 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 140/336 (41%), Positives = 210/336 (62%), Gaps = 2/336 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG L + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPLYTEKRAAFNADPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +E+G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGQEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + S ++ + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITSEEQILMSKAVRQVLSVCRKNQDLVSIGAYKPGSDP 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 +D A P + +L+Q+ + D+ + + L Sbjct: 401 AIDSAFTLKPRLDGYLQQAMKETVPYDMCVNMLRNL 436 >gi|167849985|ref|ZP_02475493.1| type III secretion system ATPase [Burkholderia pseudomallei B7210] Length = 625 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 157/402 (39%), Positives = 229/402 (56%), Gaps = 9/402 (2%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77 VV+ G + + V+ L V LG+ + + L +V+ D+ + P Sbjct: 29 VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 86 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E+IS V GR I GRVI+ LG+P+DG L L +++ P M Sbjct: 87 LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 145 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D +I+L+G Sbjct: 146 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 205 Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE LG + +SVVV ATSD S + R A A IAEYF +G VLL+ Sbjct: 206 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 265 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ITA+ +VL Sbjct: 266 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 323 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ + + Sbjct: 324 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 383 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 + L+ + E + IG Y+ G + + D+A+ + I F Sbjct: 384 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 425 >gi|134095079|ref|YP_001100154.1| flagellum-specific ATP synthase [Herminiimonas arsenicoxydans] Length = 426 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 196/322 (60%), Gaps = 6/322 (1%) Query: 101 WCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GRV++ G+P+D SLG S + + + R + G+R I+ + Sbjct: 88 LLGRVLDGAGRPLD---SLGPLHATHSGPLNVRAANPLTRAPITDVLDVGVRAINSMLTV 144 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +S Sbjct: 145 GRGQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGPEGLARS 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VVV A +D P++R IAE+F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 205 VVVAAPADTPPLMRLQGAAYTTAIAEHFRDEGKDVLLIMDSLTRYAMAQREIALAIGEPP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP SVF++LP L+ER G ++ G+ITA +VL +GD+ DPIAD+ R+ILDGHIV Sbjct: 265 ATKGYPPSVFAKLPALVERAGNGKEGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 LNRSLAE G YP +D S+SR + + +K L L R++ RD+ +G Y Sbjct: 325 LNRSLAEAGHYPAIDIEQSISRAMHNITTPEHQKQTRKLKQLTSRYQRNRDLISVGAYSA 384 Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419 G D +LD+A+ I FL+Q Sbjct: 385 GSDPVLDEAIALNTKIESFLQQ 406 >gi|308273181|emb|CBX29784.1| Flagellum-specific ATP synthase [uncultured Desulfobacterium sp.] Length = 452 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 141/340 (41%), Positives = 214/340 (62%), Gaps = 6/340 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 + GRVI+ LG+PIDG + D + +V + R + + GIR I+ + Sbjct: 112 AYIGRVIDGLGQPIDGKGEI-TCDTEYPVYGEVINPLQRGIISEVMDVGIRAINSMITVG 170 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218 GQRI + AGSG+GKS L+ M AR+ D II+L+GERGREV+EF+E LG+ +KKS+ Sbjct: 171 KGQRIAIMAGSGVGKSVLMGMMARNTAADVSIIALIGERGREVKEFVEKKLGEAGMKKSI 230 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ +TSD ++R A A +AEYF KG +VLL++DS+TR A S+RE+ +GE P Sbjct: 231 VIASTSDTPALIRIRAAYFATALAEYFRDKGLDVLLVMDSVTRVAMSLREVGLAAGEPPT 290 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 ++GY SVF+++P+LLER G EK KG+IT + +VLV+GD+ ++P+AD+VRSI+DGHIVL Sbjct: 291 SKGYTPSVFTQMPKLLERAGNLEK-KGSITGIYNVLVEGDDMSEPVADTVRSIVDGHIVL 349 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R+++ +G YP +D +AS+SR+ S+D L ++ +++ D+ IG Y+ G Sbjct: 350 SRAVSHKGHYPAIDVMASISRVMKDIVSSDHYNRSRKLIKILAVYKDAEDLINIGAYQSG 409 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 D +D A + I FL+Q + S F E ++L Sbjct: 410 SDPEIDFAKKMIGRINTFLQQQIDENSG---FDESVQRLN 446 >gi|213419050|ref|ZP_03352116.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 372 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 146/325 (44%), Positives = 197/325 (60%), Gaps = 12/325 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+L G L PP + R +E +TG+R I+ Sbjct: 54 ALLGRVLDGGGKPLDGLPAPDTLETGALI------TPPFNPLQRTPIEHVLETGVRAINA 107 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D Sbjct: 108 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGPDG 167 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 168 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 227 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 228 GEPPATKGYPPSVFAKLPALVERAGNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILD 287 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR + V L+ F+ RD+ +G Sbjct: 288 GHIVLSRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRLFKQLLSSFQRNRDLISVG 347 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLK 418 Y G D +LDKA+ P + FL+ Sbjct: 348 AYAKGSDPMLDKAITLWPQLEAFLQ 372 >gi|322432993|ref|YP_004210242.1| ATPase, FliI/YscN family [Acidobacterium sp. MP5ACTX9] gi|321165220|gb|ADW70924.1| ATPase, FliI/YscN family [Acidobacterium sp. MP5ACTX9] Length = 434 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 151/395 (38%), Positives = 234/395 (59%), Gaps = 13/395 (3%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR---FRISPSACWCG 103 + + +G++ G+V+ + + + + I GD + G R+ P G Sbjct: 46 EIITREGRSFS--GEVVGFRGSTMLTMTLQLPQGIRYGDRIIATGSRPSIRVGPE--LLG 101 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 RVI+ G+P+D G SM + + P ++R + G+R ID F GQR Sbjct: 102 RVIDGTGEPLDSLGPYGS-RRSMPVDAAAPLPLDRLPIRNTLGCGVRAIDAFITCGRGQR 160 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVAT 223 +G+F GSG+GKSTLL M AR D +++L+GERGREV+EF+E + KKS++VV+T Sbjct: 161 LGIFGGSGVGKSTLLGMMARGTEADLTVMALIGERGREVQEFLEVIGEEGRKKSILVVST 220 Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 SD+SP+L+ A L A IAEYF+++G NVLL++DS+TRFA + REI +GE P ++GY Sbjct: 221 SDQSPLLKMRAALAATAIAEYFAAEGKNVLLVVDSLTRFAMAQREIGLAAGEPPTSKGYT 280 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 SV + L RL+ER G KG+ITA +VL++GD+ DP+ D+VRS+LDGH++L+R+LA Sbjct: 281 PSVINTLARLVERAG--NFNKGSITAFYTVLMEGDDQQDPVVDTVRSLLDGHVILDRNLA 338 Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403 + YPP+ L S+SRL + + +L L+ ++ + D+ IG Y+ G D +L Sbjct: 339 LQNHYPPISVLDSLSRLMSSIAAPEHLGKARALRILLASYKRSEDLIRIGAYQKGFDTVL 398 Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 D+AV +P + FL+Q+ + F + K+L Sbjct: 399 DRAVEVLPELNRFLQQTSEETPR---FAAVAKRLN 430 >gi|167588564|ref|ZP_02380952.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ubonensis Bu] Length = 459 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 159/382 (41%), Positives = 224/382 (58%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D Sbjct: 77 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEGLYGRVLDGLGRPLDARG 136 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + G + P + RQ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 137 PV-TGAAWVSTQQDPPNPLARQMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 195 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 196 LGMIARGARADVNVIALVGERGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSAL 255 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F +G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 256 VATAIAEHFRDEGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 315 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + +G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 316 AG--QGARGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 373 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ + ++ + + LI +++E + IG YR G D + D A+ I F Sbjct: 374 LSRVMPLVANRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIAAF 433 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q+ S EDV F + +L Sbjct: 434 CAQA----SHEDVRFDALLARL 451 >gi|332526948|ref|ZP_08403037.1| flagellar protein export ATPase FliI [Rubrivivax benzoatilyticus JA2] gi|332111387|gb|EGJ11370.1| flagellar protein export ATPase FliI [Rubrivivax benzoatilyticus JA2] Length = 469 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 142/320 (44%), Positives = 197/320 (61%), Gaps = 4/320 (1%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV+++ G P+D + D + M + P AM+R V + TG+R I+ + Sbjct: 131 LGRVVDSHGHPMDRGGPIA--DAHAQPMIRRPINAMDRDPVRRALDTGVRSINALLTVGR 188 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FAG+G+GKS LL M AR D +++ L+GERGREV+EFIED LG D L++SVV Sbjct: 189 GQRLGLFAGTGVGKSVLLGMMARYTAADVIVVGLIGERGREVKEFIEDILGEDGLRRSVV 248 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D P++R A IAE+F +G +VLL++DS+TR+A + REIA GE P Sbjct: 249 VAAPADAPPLVRMQGASYATAIAEHFRDRGQHVLLLMDSLTRYAMAQREIALAIGEPPAT 308 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP+L+ER G G+ITA +VL +GD+ DPIAD+ R ILDGHIVL+ Sbjct: 309 KGYPPSVFAKLPQLVERSGNGLNGVGSITAFYTVLTEGDDPQDPIADAARGILDGHIVLS 368 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LAE G YP +D SVSR+ + L L+ ++ + RD+ +G Y PG Sbjct: 369 RELAESGHYPAIDVERSVSRVMSSVAPKEHLLAARKLRQLLAKYNKARDLIQLGAYAPGH 428 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D LD AV I L+Q Sbjct: 429 DAELDTAVRLHGQIVALLQQ 448 >gi|157373215|ref|YP_001471815.1| FliI/YscN family ATPase [Shewanella sediminis HAW-EB3] gi|157315589|gb|ABV34687.1| ATPase, FliI/YscN family [Shewanella sediminis HAW-EB3] Length = 447 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 144/364 (39%), Positives = 219/364 (60%), Gaps = 7/364 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ N + + + P+ + G V + +I GRV++ LG+P+D L Sbjct: 64 EVVGFNRETLCLMPIEHTSGLMPGSRVMPLAEQVKIPVGTSLLGRVLDGLGQPLDALGPL 123 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 K S+ + + + R+ + + GIR I+ P+ GQR+G+FAGSG+GKS LL Sbjct: 124 -KNLQSVPLSNNTTNPLLRKPIREPLDVGIRAINALLPIGRGQRLGLFAGSGVGKSVLLG 182 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238 M R D V++ L+GERGREVREFIE+ LG+ +++VV+ A +D +P++R A Sbjct: 183 MMTRFTEADVVVVGLIGERGREVREFIEESLGEEGRERAVVIAAPADTTPLMRMRAMRLC 242 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +A F +G VLL++DS+TR+A + REIA + GE P +GYP S F++LP L+E G Sbjct: 243 HHVAAAFRDQGKQVLLLVDSLTRYAQAQREIALSLGEPPATKGYPPSAFAQLPSLVELAG 302 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + G +TA +VL +GD+ DPIAD+ R+ILDGH+VL+R LAE+G +P +D ASVS Sbjct: 303 NGQDPVGTLTAFYTVLTEGDDQQDPIADAARAILDGHLVLSRKLAEQGHFPAIDISASVS 362 Query: 359 RLADKAWSADEKKLVSS--LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 RLA + AD+ +L HL R+ E R++ +GGY+ G D +D AV P++ F Sbjct: 363 RLATQV--ADQTQLSQGHHFRHLNSRYNEVRELLPLGGYQAGHDPQMDLAVRSYPMMAQF 420 Query: 417 LKQS 420 L+Q+ Sbjct: 421 LQQN 424 >gi|167828527|ref|ZP_02459998.1| type III secretion system ATPase [Burkholderia pseudomallei 9] Length = 619 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 157/402 (39%), Positives = 229/402 (56%), Gaps = 9/402 (2%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL--GQVIRINLDIVYICPVGI 77 VV+ G + + V+ L V LG+ + + L +V+ D+ + P Sbjct: 23 VVRTGRVLEVIGTLIKVSGLD--VALGELCELRTREGRLLQRAEVVGFTRDVALLSPFSQ 80 Query: 78 GEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 E+IS V GR I GRVI+ LG+P+DG L L +++ P M Sbjct: 81 LEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQ-PLIAAPPEPM 139 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR D +I+L+G Sbjct: 140 SRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIG 199 Query: 197 ERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIE LG + +SVVV ATSD S + R A A IAEYF +G VLL+ Sbjct: 200 ERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFRDRGRRVLLM 259 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ITA+ +VL Sbjct: 260 MDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGSITALYTVLA 317 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ + + Sbjct: 318 EDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAAR 377 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 + L+ + E + IG Y+ G + + D+A+ + I F Sbjct: 378 VRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFF 419 >gi|330985212|gb|EGH83315.1| type III secretion component [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008648|gb|EGH88704.1| type III secretion component [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 442 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 161/405 (39%), Positives = 225/405 (55%), Gaps = 9/405 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G + SI V + V +G+ V + G + +VI + D + P+G E + Sbjct: 26 GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139 S + G+ + GRVI+ +G+ +DG + + PPA +RQ Sbjct: 84 STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ K GIR ID L GQR+G+F G+GKS+LL+ R+ D ++I L+GERG Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203 Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVRE +E L + ++V VVATSD R A A T+AEY +G NVLL++DS Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI GE P RGYP S FS LPRLLER GP + G+ITA+ +VL +GD Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 DP+A+ RSILDGHIVL+ LA+ +P +D L S SRL D +A+ ++L S L Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 LI R +E + +G Y G D I D+A+ + I FL+Q PS+ Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSPIEAFLRQPPSE 426 >gi|188528185|ref|YP_001910872.1| flagellum-specific ATP synthase [Helicobacter pylori Shi470] gi|188144425|gb|ACD48842.1| flagellum-specific ATP synthase [Helicobacter pylori Shi470] gi|308062682|gb|ADO04570.1| flagellum-specific ATP synthase [Helicobacter pylori Cuz20] Length = 434 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + ++ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLHARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434 >gi|330818625|ref|YP_004362330.1| Flagellum-specific ATP synthase FliI [Burkholderia gladioli BSR3] gi|327371018|gb|AEA62374.1| Flagellum-specific ATP synthase FliI [Burkholderia gladioli BSR3] Length = 476 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 142/320 (44%), Positives = 198/320 (61%), Gaps = 6/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A G+P+D L +L + + + R+ + G+R I+ + GQ Sbjct: 136 GRVVDASGRPLDRLGPLAS-ELDAPLSAPTINPLEREPIHHVLDVGVRAINALLTVGRGQ 194 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL AR + ++I L+GERGREV+EFIE LG D L +SVVV Sbjct: 195 RMGLFAGSGVGKSVLLGTMARYTSAEVIVIGLIGERGREVKEFIEQILGEDGLARSVVVA 254 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A ++AEYF +G +VLL++DS+TR+A + REIA GE P +G Sbjct: 255 APADVSPLLRMQGAAYATSLAEYFRDQGKHVLLLMDSLTRYAMAQREIALAIGEPPATKG 314 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 315 YPPSVFAKLPALVERTGNGPEGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 374 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRDIRLIGGYRPGV 399 LAE G YP +D S+SR DE+ L V ++ R++ RD+ +G Y G Sbjct: 375 LAEAGHYPAIDIEQSISRAMTSLI--DERHLDRVRRFKQMLSRYQRNRDLIAVGAYAAGR 432 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D LD+A+ P I FL+Q Sbjct: 433 DAQLDRAIALYPRIEAFLQQ 452 >gi|317181103|dbj|BAJ58889.1| flagellum-specific ATP synthase [Helicobacter pylori F32] Length = 434 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 146/337 (43%), Positives = 208/337 (61%), Gaps = 3/337 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID +L L+ I + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGALDYERLAPVITMPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFEQSFQQLEEILR 434 >gi|297569158|ref|YP_003690502.1| flagellar protein export ATPase FliI [Desulfurivibrio alkaliphilus AHT2] gi|296925073|gb|ADH85883.1| flagellar protein export ATPase FliI [Desulfurivibrio alkaliphilus AHT2] Length = 438 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 142/349 (40%), Positives = 216/349 (61%), Gaps = 6/349 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ S GR+I+ LG+P+DG+ L G+ + ++ M R+R+ G+R Sbjct: 90 GAARVPVSQDLLGRIIDGLGQPMDGNGPL-PGESFYPLYAEPLNPMTRERITDPVDVGVR 148 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 I+ L GQRIG+ AGSG+GKSTL+ M AR D +I+L+GERGRE+++FIE L Sbjct: 149 AINGLLTLGKGQRIGIMAGSGVGKSTLMGMIARHTAADISVIALIGERGRELKDFIERDL 208 Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G + L +SVVVVATSD+ P++R A+ +AEYF G +V+L++DS+TR+A S RE+ Sbjct: 209 GPEGLARSVVVVATSDQPPLVRMRGAYLAMAVAEYFRDLGRDVVLMMDSVTRYAMSGREV 268 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 GE P +RGY SVF +LP+LLER G + KG+IT + +VLV+GD+ N+PIAD+VR Sbjct: 269 GLAIGEPPTSRGYTPSVFGQLPKLLERAGTCQG-KGSITGIFTVLVEGDDMNEPIADAVR 327 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 SI+DGHIVL+R LA +G YP ++ + SVSR ++ + ++ + + D+ Sbjct: 328 SIVDGHIVLSRDLASQGHYPAIEVMGSVSRCMSDVVPEEQVRAAHRFLEVLALYRRSEDL 387 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 IG Y G + +D A+ + + +L+Q+ +D + F + +LQ Sbjct: 388 INIGAYAKGSNPKIDGAIAMIDKLNGYLRQAVNDRVT---FSDSAAQLQ 433 >gi|119503667|ref|ZP_01625750.1| ATPase FliI/YscN [marine gamma proteobacterium HTCC2080] gi|119460729|gb|EAW41821.1| ATPase FliI/YscN [marine gamma proteobacterium HTCC2080] Length = 477 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 156/359 (43%), Positives = 217/359 (60%), Gaps = 20/359 (5%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G RI GRVI+ G+P+DG S D+++ + + M+R ++K GIR Sbjct: 100 GSDRIPVGPGLLGRVIDGAGRPLDGF-SPPTSDITVPMQGEPLNPMDRGALQKPLDVGIR 158 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 I+ + GQRIG+FAGSG+GKSTLL M R D V++ LVGERGREVREF+ED L Sbjct: 159 AINSLLTVARGQRIGLFAGSGVGKSTLLGMMTRFTEADVVVVGLVGERGREVREFVEDSL 218 Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G + LKK+VVV +D SP++R A IAEY+ ++G NVLL++DS+TRFA + REI Sbjct: 219 GPEGLKKAVVVATPADTSPLMRVAGCWRATAIAEYYRAQGLNVLLLVDSLTRFAQAQREI 278 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE PV+RGY SVFS +P L+ER G G+ITAV +VL +GD+ DPIADS R Sbjct: 279 GLAAGEPPVSRGYTPSVFSLMPNLIERAG--NLGSGSITAVYTVLTEGDDLQDPIADSAR 336 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR----LADKAWSADEKKLVSSLTHLIHRFEE 385 +ILDGH+VL+R +A+ G +P +D AS+SR + D A A +K + + ++ Sbjct: 337 AILDGHVVLSRKMADSGLFPAIDIEASISRAMLQITDDAQQAHARK----VRDVYATYQA 392 Query: 386 TRDIRLIGGYRPGVDLILD------KAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 RD+ +G YR G D +D AVHQ +I L Q S SS ++++ +Q Sbjct: 393 NRDLIAMGAYRAGTDPQIDLAIRHHNAVHQ--LIEQPLDQPASFDSSLSELAQVSEAMQ 449 >gi|242278623|ref|YP_002990752.1| ATPase, FliI/YscN family [Desulfovibrio salexigens DSM 2638] gi|242121517|gb|ACS79213.1| ATPase, FliI/YscN family [Desulfovibrio salexigens DSM 2638] Length = 437 Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 148/327 (45%), Positives = 202/327 (61%), Gaps = 4/327 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR ++A G+PIDG + D + P + R R+ + G++ I+ L GQ Sbjct: 101 GRAVDAFGEPIDGKGPIIP-DAYNPLHRDPPNPLERPRINEPLDVGVKAINGLLTLGKGQ 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+ AGSG+GKSTLLSM AR D +I+L+GERGREV EFIE LG + L +SV+V+ Sbjct: 160 RMGIMAGSGVGKSTLLSMMARYTVADINVIALIGERGREVVEFIERDLGPEGLARSVLVI 219 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+SP++R A TA IAEYF +VLL++DS+TRFA + RE+ +GE P G Sbjct: 220 ATSDKSPLIRLRAAYTATAIAEYFRDLNKDVLLMMDSVTRFAMAGREVGLAAGEPPTRGG 279 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF++LP+LLER G + G+IT V +VLVDGD+ +PIAD+VRSILDGHIVL R Sbjct: 280 YTPSVFAQLPKLLERAG--KNPNGSITGVYTVLVDGDDFTEPIADAVRSILDGHIVLTRD 337 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA++G YP +D L SVSR+ D + + F + D+ IG Y+ G + Sbjct: 338 LADQGHYPCIDVLKSVSRVRGDIVQNDIVAAGRKVLGQLATFRKVEDMVNIGAYQKGANP 397 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +D A+ VP I FL+Q D + D Sbjct: 398 EIDTAIKMVPAINGFLQQLVEDKQTID 424 >gi|55977138|gb|AAV68359.1| FliI [Herminiimonas arsenicoxydans] gi|193222344|emb|CAL62030.2| flagellum-specific ATP synthase [Herminiimonas arsenicoxydans] Length = 471 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 140/320 (43%), Positives = 196/320 (61%), Gaps = 6/320 (1%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++ G+P+D SLG S + + + R + G+R I+ + Sbjct: 135 GRVLDGAGRPLD---SLGPLHATHSGPLNVRAANPLTRAPITDVLDVGVRAINSMLTVGR 191 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SVV Sbjct: 192 GQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGPEGLARSVV 251 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D P++R IAE+F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 252 VAAPADTPPLMRLQGAAYTTAIAEHFRDEGKDVLLIMDSLTRYAMAQREIALAIGEPPAT 311 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G ++ G+ITA +VL +GD+ DPIAD+ R+ILDGHIVLN Sbjct: 312 KGYPPSVFAKLPALVERAGNGKEGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLN 371 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 RSLAE G YP +D S+SR + + +K L L R++ RD+ +G Y G Sbjct: 372 RSLAEAGHYPAIDIEQSISRAMHNITTPEHQKQTRKLKQLTSRYQRNRDLISVGAYSAGS 431 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D +LD+A+ I FL+Q Sbjct: 432 DPVLDEAIALNTKIESFLQQ 451 >gi|84785902|gb|ABC62090.1| secretion and cellular translocation protein N [Chlamydophila psittaci] Length = 442 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 153/386 (39%), Positives = 231/386 (59%), Gaps = 16/386 (4%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + ++ P+G +S V G I GRV+N LG+PID + Sbjct: 61 EVVGFTQNFAFLSPLGELTGVSPASEVIPTGMPLYIRAGNGLLGRVLNGLGEPIDSEI-- 118 Query: 120 GKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 KG L + + P ++R+++ TG+R ID + GQRIG+FAG+G+GK Sbjct: 119 -KGPLVDVNETYPVFRAPPDPLHREKLRTILSTGVRCIDGMLTVARGQRIGIFAGAGVGK 177 Query: 175 STLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRK 232 S+LL M AR ++ D +I+L+GERGREVREFIE LG+ +K+SV+VV+TSD+S LR Sbjct: 178 SSLLGMIARNAEEADVNVIALIGERGREVREFIEGDLGEEGMKRSVIVVSTSDQSSQLRL 237 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A IAEYF +G V+L++DS+TRFA ++RE+ +GE P GY SVFS LPR Sbjct: 238 NAAYVGTAIAEYFRDQGKTVVLMMDSVTRFARALREVGLAAGEPPARGGYTPSVFSTLPR 297 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G S +KG ITA +VLV GD+ +P+AD V+SILDGH+V + +LA+ YP +D Sbjct: 298 LLERSGAS--DKGTITAFYTVLVAGDDMKEPVADEVKSILDGHVVSSNALAQAYHYPAID 355 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SRL ++++++ + +++ + IG YR G D +D A+ + Sbjct: 356 VLASISRLLTAIVPEEQRRIIGKAREVWGKYKANEMLIRIGEYRRGSDREVDFAIDHIDK 415 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKLQ 438 + FLKQ D+ + ++E +++L+ Sbjct: 416 LNRFLKQ---DIHEKTNYEEASQQLR 438 >gi|52630923|gb|AAU84925.1| putative flagellum-specific ATP synthase [Toxoptera citricida] Length = 451 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 148/336 (44%), Positives = 213/336 (63%), Gaps = 3/336 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N G P+D +L ++ I K ++R+ ++K TGI I+ + GQ Sbjct: 116 GRVLNGKGDPLDNLPNLDPQCFTI-IKKKYINPLHRRPIKKILDTGICAINGLLTIGRGQ 174 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+F+ +GIGKS LL M ++ D V+I L+GERGREVR+FI++ LG D L KSVV+ Sbjct: 175 RIGIFSSTGIGKSILLGMMSKYTEADVVVIGLIGERGREVRDFIDNILGSDGLLKSVVIA 234 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+L+ A L A +IAEYF K NVLLI+DS+TR+A + RE++ + GELPV+RG Sbjct: 235 APADVSPLLQIEAALYATSIAEYFRDKNKNVLLIMDSLTRYAMAQREVSLSLGELPVSRG 294 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP+SVFS +P L+ER G + E G+ITA +VL + + DPI+ RSILDGHI+L+R Sbjct: 295 YPSSVFSNIPLLVERSGNIDNE-GSITAFYTVLTEYEEEQDPISQICRSILDGHIILSRY 353 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 AE G YP +D +S+SR+ + S + LI ++ +D+ IG Y G D+ Sbjct: 354 YAELGHYPAIDIESSISRVMPEIISQQQYLKACYFKKLIASYQRNKDLINIGAYIKGNDV 413 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 ILD+A+ + P + FL+Q PS+ S+ + E KL Sbjct: 414 ILDEAIQKWPNLEKFLQQKPSEKSNYLISCEKLNKL 449 >gi|15723922|gb|AAL06369.1|AF311901_21 EscN [Citrobacter rodentium] Length = 446 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 152/379 (40%), Positives = 217/379 (57%), Gaps = 8/379 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +VI IN D V++ P + G + + G F+I GR+++ +G+P+ + Sbjct: 67 LAEVIAINGDEVFLLPFEHVSGMYCGQWLSYQGEEFKIRVGDELLGRLVDGIGRPMGSNI 126 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GKSTL Sbjct: 127 ATLYLPFKRSLYAEPPDPLLRQVIDQPFTLGVRAIDGLLTCGIGQRIGIFAGSGVGKSTL 186 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237 L M D ++++L+GERGREV EF+ L K V+VV TSD + R A T Sbjct: 187 LGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFT 246 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A TIAEYF +G NVL ++DS+TR+A + R++ SGE V G+P SVFS LP+LLER Sbjct: 247 ATTIAEYFRDQGKNVLFMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERA 306 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D S Sbjct: 307 GPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSA 364 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ ++ + + LI ++ + IG Y G D DKA+ I L Sbjct: 365 SRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNRKAIQSSL 424 Query: 418 KQSPSDLSS-----EDVFQ 431 +QS D+SS E++F+ Sbjct: 425 QQSTKDISSYEKTIENLFK 443 >gi|317178126|dbj|BAJ55915.1| flagellum-specific ATP synthase [Helicobacter pylori F16] Length = 434 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 156/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + ++ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALQPFETSFQQLEEILR 434 >gi|28211328|ref|NP_782272.1| flagellum-specific ATP synthase [Clostridium tetani E88] gi|28203768|gb|AAO36209.1| flagellum-specific ATP synthase [Clostridium tetani E88] Length = 446 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 154/372 (41%), Positives = 226/372 (60%), Gaps = 6/372 (1%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108 ++ +N+ + +V+ D V + P+G I+ G V G + S G+V++ Sbjct: 54 IYNQQNNPIVCEVVGFVEDNVILMPLGELIGIAPGCRVIPSGNPLSVKCSEELFGKVLDG 113 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG P++G+ K + + + P + R+R++ TG+R ID + GQRIG+FA Sbjct: 114 LGSPLNGEKI--KTGVPYPLDREPPDPLKRRRIKDVIPTGVRAIDGYLTCGEGQRIGIFA 171 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 GSG+GKST L M A+ D +I L+GERGREV +F+E LG+ +KKS+V+ ATSD+ Sbjct: 172 GSGVGKSTSLGMIAKYAEADVNVICLIGERGREVLDFVEKDLGEEGMKKSIVICATSDKP 231 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 ++R TA IAEYF KG V+L++DS+TRFA + RE+ GE P +GY SVF Sbjct: 232 ALVRIKGAFTATAIAEYFRDKGKKVILMMDSVTRFAMAQREVGLAIGEPPATKGYTPSVF 291 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + LPRL+ER G S+K G+ITA +VLVDGD+ N+PIAD+VR ILDGHIVL+R LA + Sbjct: 292 AMLPRLMERSGMSDK--GSITAFYTVLVDGDDFNEPIADAVRGILDGHIVLSRDLAAKNH 349 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YP +D L+S+SRL ++ + K+ S LI ++E D+ IG Y G + +D A+ Sbjct: 350 YPAIDILSSISRLMNEISVKEHKESASIGRDLIATYKEAEDLINIGAYVKGSNEKIDIAI 409 Query: 408 HQVPIIYDFLKQ 419 + I +FL Q Sbjct: 410 KYIDSINEFLTQ 421 >gi|289646623|ref|ZP_06477966.1| type III secretion component, putative [Pseudomonas syringae pv. aesculi str. 2250] Length = 442 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 161/405 (39%), Positives = 225/405 (55%), Gaps = 9/405 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G + SI V + V +G+ V + G + +VI + D + P+G E + Sbjct: 26 GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139 S + G+ + GRVI+ +G+ +DG + + PPA +RQ Sbjct: 84 STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ K GIR ID L GQR+G+F G+GKS+LL+ R+ D ++I L+GERG Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203 Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVRE +E L + ++V VVATSD R A A T+AEY +G NVLL++DS Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI GE P RGYP S FS LPRLLER GP + G+ITA+ +VL +GD Sbjct: 264 LTRFARAQREIGLAVGEPPPRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 DP+A+ RSILDGHIVL+ LA+ +P +D L S SRL D +A+ ++L S L Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 LI R +E + +G Y G D I D+A+ + I FL+Q PS+ Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSSIEAFLRQPPSE 426 >gi|238794013|ref|ZP_04637631.1| Flagellum-specific ATP synthase [Yersinia intermedia ATCC 29909] gi|238726645|gb|EEQ18181.1| Flagellum-specific ATP synthase [Yersinia intermedia ATCC 29909] Length = 454 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 145/335 (43%), Positives = 201/335 (60%), Gaps = 7/335 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++ KP+DG L + S PP + R +E+ G+R I+ + Sbjct: 117 GRVLDGSAKPLDG---LPAPETSYRAPLITPPINPLQRTAIEQVLDVGVRTINALLTVGR 173 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV Sbjct: 174 GQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSVV 233 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 + A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 IAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPAT 293 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+ Sbjct: 294 KGYPPSVFAKLPALVERAGNGVTGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLS 353 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LAE G YP +D AS+SR + V L+ ++ RD+ +G Y G Sbjct: 354 RRLAESGHYPAIDIEASISRAMTSLIDENHYSQVRQFKQLLASYQRNRDLVSVGAYAAGS 413 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 D +LDKA+ P + FL+Q + SS ED Q + Sbjct: 414 DPLLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 448 >gi|238752371|ref|ZP_04613849.1| secretion system apparatus ATP synthase ssaN [Yersinia rohdei ATCC 43380] gi|238709412|gb|EEQ01652.1| secretion system apparatus ATP synthase ssaN [Yersinia rohdei ATCC 43380] Length = 433 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 161/399 (40%), Positives = 225/399 (56%), Gaps = 13/399 (3%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSA 99 V LG+ H G + D L +V+ I + P + G+ V H R R+ P Sbjct: 36 VALGELC-HIG-SVDMLAEVVAIEQQTALLSPFASSTGLRSGEWVRPLGHAHRIRVGPD- 92 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ LG PID +L E+ + P + RQ V+ TGIR ID Sbjct: 93 -LMGRVLDGLGVPIDSGPALT--GYWRELDNSPPDPLTRQPVQHLLTTGIRAIDGVLSCG 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218 GQRIG+FA +G+GKS+LL M D +++L+GERGREVREF+E L + ++V Sbjct: 150 EGQRIGIFAAAGVGKSSLLGMLCAGCSADITVLALIGERGREVREFLEQVLTPEARARTV 209 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +VVATSD + R TA T+AEYF G VLL+ DS+TR+A + REI +GE+P Sbjct: 210 IVVATSDRPALERLKGIYTATTVAEYFRECGLKVLLMADSLTRYARAAREIGLAAGEIPA 269 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +P SVF+ LPRLLER G S + G+ITA +VLV+GD+ N+P+AD VRS+LDGH+VL Sbjct: 270 MGSFPASVFAALPRLLERAGNSAQ--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHLVL 327 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LA G YP +D AS+SR+ + S L L + ++E + +G Y+ G Sbjct: 328 SRQLAGAGHYPAIDIAASISRIMPQIASVAHLALAQKLRRMQSCYQEIELLVRVGEYQEG 387 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 DL D+A+ + P I FL+Q S LSS ++ L Sbjct: 388 QDLQADEALARYPAIRAFLQQEHS-LSSGQTAADLNHTL 425 >gi|114562363|ref|YP_749876.1| flagellum-specific ATP synthase [Shewanella frigidimarina NCIMB 400] gi|114333656|gb|ABI71038.1| flagellar protein export ATPase FliI [Shewanella frigidimarina NCIMB 400] Length = 446 Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 138/318 (43%), Positives = 200/318 (62%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G P+DG L + + P ++R+ + + G+R I+ + GQ Sbjct: 106 GRVLDGSGVPLDGLGPLNTDQHASRHGPYINP-LSRRAITEPLDVGVRAINSMLTVGKGQ 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M R D +++ LVGERGREV+EFIED LG + +SVVV Sbjct: 165 RMGLFAGSGVGKSVLLGMMTRGSKADIIVVGLVGERGREVKEFIEDILGKEGRARSVVVA 224 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R A T+ IAEYF G +VLL++DS+TR+A + RE+A GE P +G Sbjct: 225 APADTSPLMRLRACETSTRIAEYFRDLGYDVLLLMDSLTRYAQAQREVALAVGEPPATKG 284 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LPRL+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 285 YPPSVFAKLPRLVERAGNGGAGQGSITAFYTVLTEGDDQQDPIADASRAILDGHIVLSRQ 344 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G YP +D AS+SR+A S + + + + + +++ RD+ IG Y G D Sbjct: 345 LADSGHYPAIDVEASISRVAPMVISEEHLEAMRKVKQMYSLYQQNRDLISIGAYSQGSDP 404 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A+ P + FL+Q Sbjct: 405 RIDNAIRLQPAMNAFLRQ 422 >gi|261838695|gb|ACX98461.1| flagellar export protein ATP synthase [Helicobacter pylori 51] Length = 434 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 157/397 (39%), Positives = 227/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 +GD V + + ++ +G V+ + P E GD V P Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQIGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLAQDENALHPFEQSFQQLEEILK 434 >gi|238762368|ref|ZP_04623339.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638] gi|238699353|gb|EEP92099.1| Flagellum-specific ATP synthase [Yersinia kristensenii ATCC 33638] Length = 439 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 147/363 (40%), Positives = 210/363 (57%), Gaps = 8/363 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDD 117 QV+ + ++ Y+ P + + G VF G I S W GRV+N LG+PIDG Sbjct: 50 QVVGFDREVTYLMPFKQPDGLMSGARVFPCELDGELLIGDS--WLGRVVNGLGEPIDGKG 107 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 LG + ++ P + RQ V G++ I+ + GQR+G+ AGSG+GKS L Sbjct: 108 LLGGETPLQPQLPQIHP-LQRQPVSTPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSML 166 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236 L M R D V++ L+GERGREV+EFIE+ L + KSVV+ A +DESP++R A Sbjct: 167 LGMMTRYTQADVVVVGLIGERGREVKEFIENSLQACGMAKSVVITAPADESPLMRIRATE 226 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 ++A Y+ KG +VLL++DS+TR+A + REIA + GE P +GYP S FS +PRL E Sbjct: 227 LCHSVATYYRDKGKDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 286 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G +TA+ +VL +GD+ DPI D R++LDGHIVL+R LAE G YP +D S Sbjct: 287 AGNSYG-SGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLSRQLAESGHYPAIDIGQS 345 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR + ++ + L + E + + +GGY G D + D+AV P I DF Sbjct: 346 ISRCMSQISPREQVQSARLLKQCYADYMEIKPLIPLGGYVAGADPMADRAVQYYPAIIDF 405 Query: 417 LKQ 419 L+Q Sbjct: 406 LRQ 408 >gi|85059279|ref|YP_454981.1| type III secretion system ATPase [Sodalis glossinidius str. 'morsitans'] gi|84779799|dbj|BAE74576.1| putative type III secretion ATP synthase [Sodalis glossinidius str. 'morsitans'] Length = 442 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 158/383 (41%), Positives = 226/383 (59%), Gaps = 11/383 (2%) Query: 58 NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116 L +V+RI D V + P G E ++ G V + +P + GRVI+ LG+ +D Sbjct: 60 GLAEVVRIEGDDVLLSPYGPTEGLTYGQRVQPLRHRQRAPVGSALLGRVIDGLGRALD-- 117 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 D E+ + PP + RQR+ + TGIR ID GQRIG+FA +G GKST Sbjct: 118 DMPDPQGPWRELDAPPPPPLTRQRIARPLLTGIRAIDALLTCGEGQRIGIFAAAGGGKST 177 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235 LLSM + D +++L+GERGREVREF+E L D + + V +VATSD + R A Sbjct: 178 LLSMLSACPDCDVTVLALIGERGREVREFLEQTLDDEARQRCVTIVATSDRPALERVCAL 237 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 A T+AE F +G VLL+ DS+TR+A + REIA +GE V YP +VF+ LPRLLE Sbjct: 238 SLATTVAEAFRDQGLRVLLLADSLTRYARAGREIALAAGETCVGSSYPPAVFAALPRLLE 297 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G G+ITA +VLV+GD+ N+P+AD VRS+LDGHI+L+R LAE G +P +D LA Sbjct: 298 RAG--MGTVGSITAFYTVLVEGDDINEPLADEVRSLLDGHIILSRRLAESGHFPAIDVLA 355 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SR+ LV++L L+ + + + +G Y+ G D + D+AV P I Sbjct: 356 SLSRIMPSIVGERHIVLVATLRQLLSVYRDVELLVRVGEYQRGDDPLADRAVDAYPAICA 415 Query: 416 FLKQ---SPSDLSSEDVFQEITK 435 FL+Q +P D+ +D+ Q++ + Sbjct: 416 FLQQRENTPCDI--DDLQQQLMR 436 >gi|300722643|ref|YP_003711933.1| flagellum-specific ATP synthase [Xenorhabdus nematophila ATCC 19061] gi|297629150|emb|CBJ89746.1| flagellum-specific ATP synthase [Xenorhabdus nematophila ATCC 19061] Length = 458 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 142/331 (42%), Positives = 199/331 (60%), Gaps = 6/331 (1%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L D S P + R + G+R I+ + Sbjct: 120 LGRVLDGAGRPLDG---LPAPDTSYRAPLTTTPFNPLQRTPISDVLDVGVRAINSLLTVG 176 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + L +SV Sbjct: 177 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGVEGLSRSV 236 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP+LR A IAE F +G +VLLI+DS+TR++ + REIA GE P Sbjct: 237 VVAAPADVSPLLRMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPA 296 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL Sbjct: 297 TKGYPPSVFAKLPALVERAGNGVSDGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVL 356 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +RSLAE G YP +D AS+SR + + L+ ++ RD+ +G Y G Sbjct: 357 SRSLAESGHYPAIDIAASISRAMTALIDNTHYRRIQFFKQLLSSYQRNRDLINVGAYAAG 416 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 D +LDKA+ P + FL+Q + S D+ Sbjct: 417 SDPLLDKAIELYPYMAQFLQQGIDERSEYDM 447 >gi|15612380|ref|NP_224033.1| flagellum-specific ATP synthase [Helicobacter pylori J99] gi|9973201|sp|Q9ZJJ3|FLII_HELPJ RecName: Full=Flagellum-specific ATP synthase gi|4155920|gb|AAD06888.1| FLAGELLUM-SPECIFIC ATP SYNTHASE [Helicobacter pylori J99] Length = 434 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 156/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + ++ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLVQDENALQPFEQSFQQLEEILR 434 >gi|119034703|gb|ABL59998.1| SctN [Lysobacter enzymogenes] Length = 450 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 147/367 (40%), Positives = 217/367 (59%), Gaps = 5/367 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P+G + ++ V GR + GR+++A G IDG Sbjct: 73 EVVGVSRQYTLLTPLGALDGVAHDTEVIATGRQASVRCGEGLLGRILDANGDAIDGRGGF 132 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G + M I + P + RQ +++ F TG+R +D GQR+G+FA +G GKSTLL Sbjct: 133 GP-TVQMPIYAASPNPLARQLIDRPFATGVRALDTVITAGVGQRLGIFAVAGGGKSTLLG 191 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238 M AR D +I+LVGERGREV EFI D LG+ LKKS++VVATSD + R A A Sbjct: 192 MLARGGDADVNVIALVGERGREVNEFIHDNLGEEGLKKSIIVVATSDRPALERSRAAWVA 251 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAEYF +G V+L++DS+TRFA ++R++ GE P RG+P SVFS++PRL ER G Sbjct: 252 TAIAEYFRDRGKRVMLLVDSVTRFARALRDVGLAIGEPPARRGFPPSVFSQMPRLFERAG 311 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 +KG+ITA +VL++G++ +DP+A+ VRSILDGHIVL+R LA YP +D L S+S Sbjct: 312 --NNDKGSITAFYTVLMEGEDGDDPVAEEVRSILDGHIVLSRKLAAAYHYPAIDVLVSLS 369 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R + ++ L + + ++ + +G Y+ G D D A+ ++ I LK Sbjct: 370 RTMPRVADEAHQRAAGQLRKYLAKHQDIELLLQLGEYKRGSDADADIAIEKIEPIRKLLK 429 Query: 419 QSPSDLS 425 QS +DL+ Sbjct: 430 QSSNDLA 436 >gi|226327723|ref|ZP_03803241.1| hypothetical protein PROPEN_01596 [Proteus penneri ATCC 35198] gi|225203427|gb|EEG85781.1| hypothetical protein PROPEN_01596 [Proteus penneri ATCC 35198] Length = 455 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 144/339 (42%), Positives = 202/339 (59%), Gaps = 5/339 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G P+DG G + I + P + R + G+R I+ + Sbjct: 114 ALLGRVLDGSGYPLDGLPPPDTGYRAPLITPPINP-LQRTPITDVLDVGVRAINSLLTVG 172 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + L +SV Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARFTQADVIVVGLIGERGREVKDFIENILGTEGLARSV 232 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP+LR A IAE F +G +VLLI+DS+TR++ + REIA GE P Sbjct: 233 VVAAPADVSPLLRMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAVGEPPA 292 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 293 TKGYPPSVFAKLPALVERAGNGVDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 352 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +RSLAE G YP +D AS+SR + V L+ ++ RD+ +G Y G Sbjct: 353 SRSLAESGHYPAIDIEASISRAMTSLIDKTHYRRVQMFKQLLSNYQRNRDLINVGAYAAG 412 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D +LDKA+ P + FL+Q D+ + +Q ++L Sbjct: 413 SDPMLDKAIALYPSLAKFLQQ---DIQEQCSYQSACEQL 448 >gi|310764885|gb|ADP09835.1| Flagellum-specific ATP synthase [Erwinia sp. Ejp617] Length = 454 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 137/319 (42%), Positives = 201/319 (63%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A G+P+DG + K + + P ++R ++ G+R I+ + GQ Sbjct: 115 GRVLDAQGRPLDGRPAPLKTRCASLFTQPINP-LHRDPIKSVLDVGVRAINGLLTVGRGQ 173 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + ++++VV+ Sbjct: 174 RMGLFAGSGVGKSVLLGMMARFTDADVIVVGLIGERGREVKDFIENILGAEGIERAVVIA 233 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR + A +AE F +G NVLLI+DS+TRFA + RE+A GE P +G Sbjct: 234 APADVSPVLRMQGAVYATRLAEDFRDRGMNVLLIMDSLTRFAMAQREVALAIGEPPATKG 293 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 294 YPPSVFARLPALVERAGNGVAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 353 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + + + V S + ++ D+ +G Y G D Sbjct: 354 LAESGHYPAIDIEASISRAMTELIPHAQYRKVQSFKQQLSSYQRNSDLVSVGAYVSGSDA 413 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +LD+A+ + P + FL+QS Sbjct: 414 LLDRAIARYPQMESFLQQS 432 >gi|388096|gb|AAA20119.1| yscN [Yersinia pseudotuberculosis] gi|392946|gb|AAA73398.1| YscN [Yersinia pseudotuberculosis] Length = 439 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 144/324 (44%), Positives = 200/324 (61%), Gaps = 4/324 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V++ LG+P DG L + + P M+R+ + GIRVID GQ Sbjct: 105 GQVLDGLGQPFDGGH-LPEPAAWYPVYQDAPAPMSRKLITTPLSLGIRVIDGLLTCGEGQ 163 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FA +G GKSTLL+ RS D +++L+GERG EVREFIE LG+ L+K+ +VV Sbjct: 164 RMGIFAAAGGGKSTLLASLIRSAEVDVTVLALIGERGPEVREFIESDLGEEGLRKAFLVV 223 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD + R A A +IAEYF +G VLL++DS+TRFA + REI +GE P RG Sbjct: 224 ATSDRPSMERAKAGFVATSIAEYFRDQGKRVLLLMDSVTRFARAQREIGLAAGEPPTRRG 283 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LPRL+ER G S K G+ITA+ +VLV+GD+ +P+AD RSILDGHI+L+R Sbjct: 284 YPPSVFAALPRLMERAGQSSK--GSITALYTVLVEGDDMTEPVADETRSILDGHIILSRK 341 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA YP +D L S SR+ ++ S + K L L+ ++EE + IG Y+ G D Sbjct: 342 LAAANHYPAIDVLRSASRVMNQIVSKEHKTWAGHLRRLLAKYEEVELLLQIGEYQKGQDK 401 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425 D+A+ ++ I +L Q +LS Sbjct: 402 EADQAIERMGAIRGWLCQGTHELS 425 >gi|34498589|ref|NP_902804.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC 12472] gi|34104443|gb|AAQ60801.1| flagellum-specific ATP synthase [Chromobacterium violaceum ATCC 12472] Length = 466 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 201/323 (62%), Gaps = 4/323 (1%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GRV+++LG+P+DG + D + S+ ++R V G+R I+ + Sbjct: 126 ASLLGRVLDSLGRPLDGLGPI-HPDAWFPLYSQPMNPLHRTPVHDVLDVGVRAINGLLTV 184 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217 GQR+G+FAGSG+GKS LL M AR D V++ L+GERGREV++FIE+ LG+ + +S Sbjct: 185 GRGQRLGLFAGSGVGKSVLLGMMARFTKADVVVVGLIGERGREVKDFIENILGEEGRARS 244 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VVV A +D P++R A +AEYF S+G +VLL++DS+TRFA + REIA GE P Sbjct: 245 VVVAAPADMPPLMRLHGAAYATALAEYFRSQGLDVLLLMDSVTRFAMAQREIALAIGEPP 304 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 V RGYP SVF+ LP+L+ER G E+ G+IT +VL +GD+ DPIADS R+ILDGH V Sbjct: 305 VTRGYPPSVFARLPQLIERAGNGEEGGGSITGFYTVLSEGDDQQDPIADSARAILDGHFV 364 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R LAE G YP +D S+SR+ + L L R++ RD+ +G Y Sbjct: 365 LSRDLAEAGHYPAIDIEQSISRVMVDVVPQQQMDLARHFKQLYSRYQRNRDLISVGAYVS 424 Query: 398 GVDLILDKAV-HQVPIIYDFLKQ 419 G D +LD A+ Q+P++ FL Q Sbjct: 425 GSDPVLDDAMRRQLPMV-SFLTQ 446 >gi|283834468|ref|ZP_06354209.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC 29220] gi|291070015|gb|EFE08124.1| flagellar protein export ATPase FliI [Citrobacter youngae ATCC 29220] Length = 446 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 148/380 (38%), Positives = 218/380 (57%), Gaps = 4/380 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDS 118 Q + N DI Y+ P + G VF + + I S W GRV+N LG+ +D Sbjct: 59 AQAVGFNRDITYLMPFKHPVGLMAGARVFPEEKAQEILISESWLGRVVNGLGESLDAKGR 118 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L D+ + P + R+ V + G++ I+ + GQR+G+ AGSG+GKS LL Sbjct: 119 LTGNDVLPPQAPSINP-LTRRSVNQPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSVLL 177 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 M R D V++ L+GERGREV+EFI+ LG + L KS++V A +DESP++R A Sbjct: 178 GMITRQTKADIVVVGLIGERGREVKEFIDHSLGAEGLAKSIIVAAPADESPLMRLKATEL 237 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP S F +P+L+E Sbjct: 238 CHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFGMIPKLVESA 297 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G SE E G++TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D S+ Sbjct: 298 GNSESE-GSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDIGQSI 356 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR + + ++ L + E + + +GGY G D +DKAV P I FL Sbjct: 357 SRCMTQVTPYEHQQSARLLKQNYAAYMEIKPLIPLGGYVAGADPSVDKAVKVFPAIERFL 416 Query: 418 KQSPSDLSSEDVFQEITKKL 437 +Q S+ +S ++ Q + L Sbjct: 417 RQEVSEPASLELVQSRLQAL 436 >gi|33596155|ref|NP_883798.1| flagellum-specific ATP synthase FliI [Bordetella parapertussis 12822] gi|33573158|emb|CAE36809.1| flagellum-specific ATP synthase FliI [Bordetella parapertussis] Length = 491 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 142/329 (43%), Positives = 204/329 (62%), Gaps = 6/329 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L + + + P ++R ++ G+R I+ + Sbjct: 142 AMLGRVVDGAGRPLDGLGPLAGAEQAPLTALPINP-LSRAPIDSVLDVGVRAINGLLTVG 200 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SV Sbjct: 201 RGQRMGLFAGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSV 260 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP+LR A +AE+F +G +VLLI+DS+TRFA + REIA GE P Sbjct: 261 VVAAPADVSPLLRLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPA 320 Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334 +GYP SVF++LP L+ER G PS K G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 321 TKGYPPSVFAKLPALVERTGMGAPSPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 380 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 H+VL+R LAE G YP +D AS+SR + ++ + V ++ R++ RD+ +G Sbjct: 381 HVVLSRHLAEAGHYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGA 440 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 Y G D LD A+ + P + +L+Q+ D Sbjct: 441 YVAGADPQLDDAIARYPRLEAYLQQNIGD 469 >gi|68164517|gb|AAY87246.1| predicted flagellar biosynthesis/type III secretory pathway ATPase [uncultured bacterium BAC17H8] Length = 441 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 136/325 (41%), Positives = 201/325 (61%), Gaps = 2/325 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ +ALGKPIDG + + D +M + + R+ V+ G+R I+ + GQ Sbjct: 104 GRITDALGKPIDGGPDM-RLDGQWPLMGREINPLARKPVDSPLDVGVRAINALLTVGKGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221 RIG+ AGSG+GKS LL M +R D V++ ++GERGREV EF + L G+ ++ +V Sbjct: 163 RIGIIAGSGVGKSVLLGMMSRFTTADIVVVGMIGERGREVGEFAKTVLEGEAAARTTIVA 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +D SP+LR A IAE++ +G +VLLI+DS+TR AH+ REI GE P A+G Sbjct: 223 VPADRSPLLRIRGAERATAIAEFYRDQGKDVLLIMDSLTRVAHARREIGLALGEQPTAKG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SV S +PRL+ER G +G IT++ +VL DGD+ NDP+ D+ R+ILDGHI+L+R Sbjct: 283 YPPSVVSMIPRLIERTGSGAAGQGTITSIYTVLADGDDANDPVVDTARAILDGHILLSRQ 342 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 A+ G YP +D +SVSR+ + A + + L+ + E RD+ L+GGY PG D+ Sbjct: 343 QAQMGVYPAIDVPSSVSRVMNDIVDAGQSEAARKFRRLVSLYLENRDLILMGGYTPGQDV 402 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426 LD AV P + + ++Q+ SD ++ Sbjct: 403 DLDLAVSLWPQLMELIQQNGSDKAA 427 >gi|289208340|ref|YP_003460406.1| flagellar protein export ATPase FliI [Thioalkalivibrio sp. K90mix] gi|288943971|gb|ADC71670.1| flagellar protein export ATPase FliI [Thioalkalivibrio sp. K90mix] Length = 458 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 152/399 (38%), Positives = 225/399 (56%), Gaps = 6/399 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVGIGEEIS 82 G +S +T + + L + +G + G+N + +V+ D ++ P + ++ Sbjct: 41 GRLSRLTGLTFEAEGL--RLPMGGRALIHGENGAAVPAEVVGFQNDRTFLMPEELASGLT 98 Query: 83 LGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 G + R P GRVI+A G+P+DG L D S + P + R V Sbjct: 99 PGARIEPLDIQREIPVGDALLGRVIDANGQPLDGKGPLRARDHSPLSGRPINP-LQRAPV 157 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 + GIR I+ + GQR+G+FAGSG+GKS LL M R+ D +++ L+GERGRE Sbjct: 158 REPLDVGIRSINGLLSVGRGQRLGLFAGSGVGKSVLLGMMTRNTSADVIVVGLIGERGRE 217 Query: 202 VREFIEDYLGDNLKKSVVVVAT-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 V EFI + L + ++ VVVA +D+SP+LR+ A T+AE F +G NVLL++DS+T Sbjct: 218 VNEFIHEILDEESRQRTVVVAVPADQSPLLRQHGAWVATTVAESFRDRGLNVLLLMDSLT 277 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RFA REIA GE P ++GY SVF+ LP+L+ER G + G+ITA +VL +GD+ Sbjct: 278 RFAQGAREIAMAIGEPPASKGYAASVFARLPQLVERAGNGDVGGGSITAFYTVLAEGDDQ 337 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 NDPI D+ R+ILDGH+VL+R +AE GRYP +D ASVSR+ + + ++ L Sbjct: 338 NDPIVDAARAILDGHVVLSREIAETGRYPAIDVSASVSRVMSALITPEHEQAARRFRDLA 397 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + RD+ +G YR G D LD+AV + +L Q Sbjct: 398 STYMRNRDLIAVGAYRRGADTHLDEAVAMHERLEAYLGQ 436 >gi|261840095|gb|ACX99860.1| flagellum-specific ATP synthase [Helicobacter pylori 52] Length = 434 Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 156/397 (39%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSACWC 102 +GD V + + ++ +G V+ + P E GD ++F Sbjct: 40 VGDVVKIEKSDGTECVGMVVVAEKEQFGFTPFNFIEGARAGDKVLFLKEGLNFPVGRNLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N LG+ ID L L+ I + + P + R +++ F G++ ID GQ Sbjct: 100 GRVLNPLGQVIDNKGVLDYERLAPVITTPIAP-LKRGLIDEVFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+VVA Sbjct: 159 KLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLVVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 338 TDYGIYPPINILNSASRVAKDIISESQNLCARKFRRLYALLKENEMLIRIGSYQMGNDKE 397 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 LD+A+ + ++ FL Q + L E FQ++ + L+ Sbjct: 398 LDEAIKKKALMEQFLVQDENALQPFEQSFQQLEEILR 434 >gi|221209597|ref|ZP_03582578.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia multivorans CGD1] gi|221170285|gb|EEE02751.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia multivorans CGD1] Length = 462 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 157/380 (41%), Positives = 222/380 (58%), Gaps = 6/380 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 80 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 138 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 139 GPVTGATWVSTQQDPPNPLARRMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 198 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 199 LGMIARGAQADVSVIALVGERGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSAL 258 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 259 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 318 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 319 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 376 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S ++ + + LI +++E + IG YR G D + D A+ I F Sbjct: 377 LSRVMPLVASRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAF 436 Query: 417 LKQSP-SDLSSEDVFQEITK 435 Q+ D+ + + ++TK Sbjct: 437 CAQAQHEDVRFDALLAKLTK 456 >gi|38639342|gb|AAR25808.1| BcscN [Burkholderia multivorans E243] Length = 459 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 77 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 135 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+GVFA SG+GKSTL Sbjct: 136 GPVTGATWVSTQQDPPNPLARRMIDTPFPTGVRVIDGLMTLGVGQRVGVFAPSGVGKSTL 195 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 196 LGMIARGAQADVNVIALVGERGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSAL 255 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 256 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 315 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 316 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 373 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S ++ + + LI +++E + IG YR G D + D A+ I F Sbjct: 374 LSRVMPLVASRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAF 433 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q+ EDV F + KL Sbjct: 434 CAQA----QHEDVRFDALLAKL 451 >gi|54308119|ref|YP_129139.1| flagellum-specific ATP synthase [Photobacterium profundum SS9] gi|46912545|emb|CAG19337.1| putative polar flagellum-specific ATP synthase FliI [Photobacterium profundum SS9] Length = 440 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 157/401 (39%), Positives = 237/401 (59%), Gaps = 25/401 (6%) Query: 32 VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDL----- 86 V T+ + +G + + N D +V+ + +I+++ P E LG + Sbjct: 31 VGLTLEAIGCRAPVGSLCIVETLNGDLEAEVVGFSGEILFLMP----SEQLLGVMPGAKV 86 Query: 87 --VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMN---RQR 140 V H + P GRVI+ +G P+DG GD+ E S PA+N R+ Sbjct: 87 TPVLHDNGLPVGPE--LLGRVIDGVGNPLDG-----LGDIFTEKRASFTSPAINPLLRKP 139 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +++ GI+ I+ + GQRIG+FAGSG+GKS L M R V++ L+GERGR Sbjct: 140 IKEPLDVGIKAINGLLSVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGR 199 Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV+EFI++ LG+ K++VV+ A +D SP++R TA+TIAEYF +G +VLL++DS+ Sbjct: 200 EVKEFIDEILGEEGRKRAVVIAAPADTSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSL 259 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA + REIA + GE P +GYP SVF++LP L+ER G ++G+ITA +VL +GD+ Sbjct: 260 TRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGSGDQGSITAFFTVLTEGDD 319 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DPIAD+ R+ILDGHIVL+R +A+ G YP +D SVSR+ A DE L+S ++ Sbjct: 320 LQDPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVM-PAIVDDEHMLMSKAVRQ 378 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 ++ + +D+ IG Y+PG D +D+A P + +L+Q Sbjct: 379 ILSICRKNQDLVSIGAYKPGTDPTIDQAFSFKPKLDAYLQQ 419 >gi|37525868|ref|NP_929212.1| flagellum-specific ATP synthase [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785297|emb|CAE14238.1| flagellum-specific ATP synthase [Photorhabdus luminescens subsp. laumondii TTO1] Length = 454 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 164/440 (37%), Positives = 238/440 (54%), Gaps = 20/440 (4%) Query: 5 LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL---- 59 L TL + +K V+ G ++ T + T L ++ LG + + +N N+ Sbjct: 9 LATLDTFEQKLAKTSPVRRYGRLTRATGLVMEATGL--HLPLGATCLIERQNGSNIEEVE 66 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFH-------WGRFRISPSACWCGRVINALGKP 112 +V+ N + + + P+ E I G V+ G ++ GRV++ G+P Sbjct: 67 SEVVGFNGEKLLLMPLEDLEGIVPGARVYARPYSEDCGGGRQLPLGPELLGRVLDGAGRP 126 Query: 113 IDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170 +DG S D S PP + R + G+R I+ + GQR+G+FAGS Sbjct: 127 LDGFPS---PDTSYRAPLTTPPINPLQRTPISDVLDVGVRAINALLTVGRGQRMGLFAGS 183 Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPI 229 G+GKS LL M AR D +++ L+GERGREV++FIE+ LG L +SVVV A +D SP+ Sbjct: 184 GVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAAGLARSVVVAAPADISPL 243 Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 LR A IAE F +G +VLLI+DS+TR++ + REIA GE P +GYP SVF++ Sbjct: 244 LRMQGASYATRIAEDFRDRGKHVLLIMDSLTRYSMAQREIALAIGEPPATKGYPPSVFAK 303 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 LP L+ER G G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLAE G YP Sbjct: 304 LPALVERAGNGVNGGGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRSLAESGHYP 363 Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409 +D AS+SR + V + ++ RD+ +G Y G D +LDKA+ Sbjct: 364 AIDIEASISRAMTALIDKQHYRRVQQFKQRLASYQRNRDLINVGAYAAGSDPLLDKAIEL 423 Query: 410 VPIIYDFLKQSPSDLSSEDV 429 P + FL+Q + S D Sbjct: 424 YPYMAQFLQQDIEERSEYDA 443 >gi|298487101|ref|ZP_07005151.1| type III secretion system ATPase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158344|gb|EFH99414.1| type III secretion system ATPase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 442 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 160/405 (39%), Positives = 225/405 (55%), Gaps = 9/405 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G + SI V + V +G+ V + G + +VI + D + P+G E + Sbjct: 26 GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139 S + G+ + GRVI+ +G+ +DG + + PPA +RQ Sbjct: 84 STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ K GIR ID L GQR+G+F G+GKS+LL+ R+ D ++I L+GERG Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203 Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVRE +E L + ++V VVATSD R A A T+AEY +G NVLL++DS Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI GE P RGYP S FS LPRLLER GP + G+ITA+ +VL +GD Sbjct: 264 LTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 DP+A+ RSILDGHIVL+ +A+ +P +D L S SRL D +A+ ++L S L Sbjct: 322 AAMDPVAEETRSILDGHIVLSAEMAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRE 381 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 LI R +E + +G Y G D I D+A+ + I FL+Q PS+ Sbjct: 382 LIARRQEIELLIQVGEYAVGSDPIADEAIARHSPIEAFLRQPPSE 426 >gi|171322220|ref|ZP_02911067.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5] gi|171092457|gb|EDT37802.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5] Length = 461 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 161/382 (42%), Positives = 222/382 (58%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S +V GR + P GRV++ LG+P+D D Sbjct: 79 LAEVVGFSRQTTLLTPLGDVAGLSPETIVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 137 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 138 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 197 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 198 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 257 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 258 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 317 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 318 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 375 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S ++ + + LI +++E + IG YR G D + D A+ I F Sbjct: 376 LSRVMPLVASRAHQQSAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 435 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q S EDV F + KL Sbjct: 436 CAQG----SHEDVRFDALLAKL 453 >gi|94496764|ref|ZP_01303339.1| type III secretion system ATPase [Sphingomonas sp. SKA58] gi|94423777|gb|EAT08803.1| type III secretion system ATPase [Sphingomonas sp. SKA58] Length = 436 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 147/355 (41%), Positives = 219/355 (61%), Gaps = 5/355 (1%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 +++ G R+ S GRV++A +P+DG + + S + + P M RQR+++ Sbjct: 86 EVMVRVGEDRVPVSGALLGRVLDARLQPLDGRPPV-ETPASQPLYAAAPNPMERQRIDRQ 144 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204 +TG+R ID PL GQRIGVFA +G GKSTLL AR D ++I+L+GERGREVRE Sbjct: 145 VETGVRAIDGLLPLGRGQRIGVFAAAGGGKSTLLGTLARQAQADVIVIALIGERGREVRE 204 Query: 205 FIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 FIED LG + L +SVV+ +TSD + R A A IAE F ++G +VLL++DS+TRFA Sbjct: 205 FIEDNLGSEGLARSVVIASTSDRPALERARAAHAATAIAEGFRAEGKHVLLLMDSVTRFA 264 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 ++REI SGE PV RG+P SVF+ELPRL ER G G IT + +VL++ + +DP Sbjct: 265 RALREIGLASGEPPVRRGFPPSVFAELPRLFERAGCD--ACGEITGIYTVLLE-EEEDDP 321 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383 + + VRS+LDGH++L+R LA G YP +D L S SRL + E++ S ++ + Sbjct: 322 VGEEVRSLLDGHVILSRKLAARGHYPAIDILVSQSRLMGQLMEDGERRAALSFRAMLAKL 381 Query: 384 EETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +E + +G Y+PG D + D+A+ + + FL+QS + +S + + I + + Sbjct: 382 DEIELLLQVGDYKPGQDALADRAIARRDEMDGFLRQSTHETASLPMTRAILRGFE 436 >gi|330889058|gb|EGH21719.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. mori str. 301020] Length = 407 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 142/331 (42%), Positives = 199/331 (60%), Gaps = 3/331 (0%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REI GE P +GYP SVF+ LP+L+ER G +E G+I Sbjct: 256 KGKNVLLLMDSLTRFAQAQREIPLAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 315 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 316 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 375 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 + L R+++TRD+ +G Y G Sbjct: 376 EHMARAQHFKQLWSRYQQTRDLISVGAYVAG 406 >gi|32490806|ref|NP_871060.1| hypothetical protein WGLp057 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166012|dbj|BAC24203.1| fliI [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 458 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 151/363 (41%), Positives = 215/363 (59%), Gaps = 9/363 (2%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 ICP G + DL R+ P GRV+N+ GK +D + K + + Sbjct: 88 ICP---GARVHSQDLYNSKISTRLLPIGYSLLGRVLNSSGKFLD-KLPVPKTYKKKSLYT 143 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 K + R ++K G+R I+ + GQR+G+F+GSG+GKS LL M A+ D + Sbjct: 144 KPINPLLRDPIKKVLDVGVRAINGLLTVGIGQRMGIFSGSGVGKSILLGMMAKYTKADII 203 Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 ++ L+GERGREV++FIE+ LG+ + +SVV+ A +D SP+LR + A IAEYF KG Sbjct: 204 VVGLIGERGREVKDFIENILGEKGISRSVVIAAPADVSPMLRIQGAIYATRIAEYFRDKG 263 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VLLI+DS+TR+A + REI+ GE P +GYP SVF++L L+ER G KG+ITA Sbjct: 264 KHVLLIMDSLTRYAMAQREISLAIGEPPATKGYPPSVFAKLSELVERTGNGTDNKGSITA 323 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 +VL +GD+ DPIADS RSILDGHIVL+R L+E G YP +D +S+SR + Sbjct: 324 FYTVLTEGDDQQDPIADSSRSILDGHIVLSRFLSESGHYPSIDIESSISRTMSNIVTESH 383 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K V + LI +++ RD+ +G Y G D ILD A+ P I +LKQ DL+ Sbjct: 384 FKCVQKVKQLISSYQKNRDLLSVGAYSSGSDPILDIAIKNYPKIEKYLKQ---DLNQSCS 440 Query: 430 FQE 432 ++E Sbjct: 441 YEE 443 >gi|51596036|ref|YP_070227.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP 32953] gi|51589318|emb|CAH20939.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP 32953] Length = 466 Score = 260 bits (664), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R + + G+R I+ + GQ Sbjct: 129 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 187 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 188 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 247 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 248 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 307 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 308 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 367 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR D V L+ ++ RD+ +G Y G D Sbjct: 368 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLVSVGAYAAGSDP 427 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + SS D Sbjct: 428 LLDKAIALYPQMEAFLQQGMFERSSFD 454 >gi|161520296|ref|YP_001583723.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia multivorans ATCC 17616] gi|189353525|ref|YP_001949152.1| ATP synthase in type III secretion protein SctN [Burkholderia multivorans ATCC 17616] gi|160344346|gb|ABX17431.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia multivorans ATCC 17616] gi|189337547|dbj|BAG46616.1| ATP synthase in type III secretion protein SctN [Burkholderia multivorans ATCC 17616] Length = 462 Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 157/380 (41%), Positives = 222/380 (58%), Gaps = 6/380 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 80 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 138 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 139 GPVTGATWVSTQQDPPNPLARRMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 198 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 199 LGMIARGAQADVNVIALVGERGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSAL 258 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 259 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 318 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 319 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 376 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S ++ + + LI +++E + IG YR G D + D A+ I F Sbjct: 377 LSRVMPLVASRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAF 436 Query: 417 LKQSP-SDLSSEDVFQEITK 435 Q+ D+ + + ++TK Sbjct: 437 CAQAQHEDVRFDALLAKLTK 456 >gi|186895141|ref|YP_001872253.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis PB1/+] gi|186698167|gb|ACC88796.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis PB1/+] Length = 472 Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R + + G+R I+ + GQ Sbjct: 135 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 193 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 194 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 253 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 254 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 313 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 314 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 373 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR D V L+ ++ RD+ +G Y G D Sbjct: 374 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLVSVGAYAAGSDP 433 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + SS D Sbjct: 434 LLDKAIALYPQMEAFLQQGMFERSSFD 460 >gi|269965702|ref|ZP_06179815.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B] gi|269829770|gb|EEZ84006.1| flagellum-specific ATP synthase [Vibrio alginolyticus 40B] Length = 439 Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 137/319 (42%), Positives = 203/319 (63%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG L + + P + R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPLYTDHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGSAEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +D A P + ++L+QS Sbjct: 401 AIDGAFTLKPKLDEYLQQS 419 >gi|50120656|ref|YP_049823.1| flagellum-specific ATP synthase [Pectobacterium atrosepticum SCRI1043] gi|49611182|emb|CAG74628.1| flagellum-specific ATP synthase [Pectobacterium atrosepticum SCRI1043] Length = 457 Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 140/318 (44%), Positives = 194/318 (61%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I V P + R ++ G+R I+ + GQ Sbjct: 118 GRVLDGSAKPLDGLPAPDTGYRAPLITPPVNP-LQRTAIDSVLDVGVRAINALLTVGRGQ 176 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 177 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIA 236 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 237 APADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKG 296 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G++TA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 297 YPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 356 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR D V L+ ++ RD+ +G Y G D Sbjct: 357 LAESGHYPAIDIEASISRAMTALIDEDHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDP 416 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LDKA+ P + FL+Q Sbjct: 417 MLDKAIRLYPHLEAFLQQ 434 >gi|117923588|ref|YP_864205.1| flagellar protein export ATPase FliI [Magnetococcus sp. MC-1] gi|117607344|gb|ABK42799.1| type III secretion system ATPase, FliI/YscN [Magnetococcus sp. MC-1] Length = 449 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 148/359 (41%), Positives = 219/359 (61%), Gaps = 4/359 (1%) Query: 70 VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G + I G + GR P GRVI +G+ +DG +L D + + Sbjct: 80 VLLMPLGSIKGIFPGSRIISQGRAEQVPVGPQLLGRVIGPMGEALDGH-ALPHLDDHVPL 138 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + M R+++E+ G+R ++ + GQR+G+FAG+G+GKSTLL M AR D Sbjct: 139 HAAPINPMLRRKIEEPLDLGVRAVNSLLTVGRGQRLGIFAGTGVGKSTLLGMMARYTAAD 198 Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+L+GERGREV EFIED LG + + +S+V+VATSD+ P+LR A A IAE+F + Sbjct: 199 INVIALIGERGREVVEFIEDELGPEGMARSIVIVATSDQPPLLRLRAAYMATAIAEFFRA 258 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 + +VLL++DSITRFA + RE+ +GE P +RGYP S F LPRLLER G ++ +G+I Sbjct: 259 QQKDVLLLMDSITRFAMAQREVGLATGEPPTSRGYPPSTFMLLPRLLER-GGRDQGRGSI 317 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T++ +VL++GD+ DPI D+VR ILDGHIVL+R LA YP +D S+SRL + Sbjct: 318 TSIYTVLMEGDDIQDPIVDAVRGILDGHIVLSRDLAAANHYPAIDVNGSLSRLMEGLSEK 377 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 K+ L ++ + + D+ IG Y G + +D+A+ + I FLKQS + S+ Sbjct: 378 AHKRAAGQLREILATYVKAEDMINIGAYVAGSNPRIDRAIRFIEPIRTFLKQSVEEPST 436 >gi|145598585|ref|YP_001162661.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F] gi|145210281|gb|ABP39688.1| flagellum-specific ATP synthase [Yersinia pestis Pestoides F] Length = 500 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R + + G+R I+ + GQ Sbjct: 163 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 221 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 222 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 281 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 282 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 341 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 342 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 401 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR D V L+ ++ RD+ +G Y G D Sbjct: 402 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLISVGAYAAGSDP 461 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + SS D Sbjct: 462 LLDKAIALYPQMEAFLQQGMFERSSFD 488 >gi|311105957|ref|YP_003978810.1| flagellar protein export ATPase FliI [Achromobacter xylosoxidans A8] gi|310760646|gb|ADP16095.1| flagellar protein export ATPase FliI [Achromobacter xylosoxidans A8] Length = 491 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 142/325 (43%), Positives = 202/325 (62%), Gaps = 6/325 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L +L+ + P ++R ++ TG+R I+ + Sbjct: 142 ALLGRVLDGAGRPLDGLGPLTGAELAPLSAQPINP-LSRAPIDTVLDTGVRAINGLLTVG 200 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SV Sbjct: 201 RGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKEFIEHNLGPEGLARSV 260 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D S +LR A +AE+F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 261 VVAAPADVSALLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPA 320 Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334 +GYP SVF++LP L+ER G P K G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 321 TKGYPPSVFAKLPMLVERAGMGAPGASGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 380 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 H+VL+R LAE G YP +D AS+SR + ++ +V + RF+ RD+ +G Sbjct: 381 HVVLSRHLAEAGHYPAIDIEASISRAMTSLITPEQFAVVRRFKQSLSRFQRNRDLIAVGA 440 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D LD+A+ + P + FL+Q Sbjct: 441 YAAGNDPQLDEAIARYPRLEAFLQQ 465 >gi|71737205|ref|YP_274726.1| type III secretion component [Pseudomonas syringae pv. phaseolicola 1448A] gi|71557758|gb|AAZ36969.1| type III secretion component, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 442 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 162/408 (39%), Positives = 225/408 (55%), Gaps = 9/408 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G + SI V + V +G+ V + G + +VI + D + P+G E + Sbjct: 26 GTLRSIRGVLLRASVAG--VGIGELCVLRDPGNGRELSAEVIGFDEDDAILSPIGSMEGL 83 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQ 139 S + G+ + GRVI+ +G+ +DG + + PPA +RQ Sbjct: 84 STRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPTATLGMQHYPLHAEPPAPFSRQ 143 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+ K GIR ID L GQR+G+F G+GKS+LL+ R+ D ++I L+GERG Sbjct: 144 RIVKPLSLGIRAIDSLLTLGQGQRMGIFGEPGVGKSSLLASIVRNSDADVIVIGLIGERG 203 Query: 200 REVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVRE +E L + ++V VVATSD R A A T+AEY +G NVLL++DS Sbjct: 204 REVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDS 263 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TRFA + REI GE P RGYP S FS LPRLLER GP + G+ITA+ +VL +GD Sbjct: 264 LTRFARAQREIGLAVGEPPPRRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGD 321 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 DP+A+ RSILDGHIVL+ LA+ +P +D L S SRL D +A+ + L S L Sbjct: 322 AAMDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRSRLMDHIATAEHRHLASRLRE 381 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 LI R +E + +G Y G D I D+A+ + I FL+Q PS+ S Sbjct: 382 LIARRQEIELLIQVGEYAAGSDPIADEAIARHSPIEAFLRQPPSEHDS 429 >gi|170737794|ref|YP_001779054.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia cenocepacia MC0-3] gi|169819982|gb|ACA94564.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia cenocepacia MC0-3] Length = 458 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 76 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 134 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 135 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 194 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 195 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 254 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 255 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 314 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 315 AG--QGAHGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 372 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S + + + LI +++E + IG YR G D + D A+ I F Sbjct: 373 LSRVMPLVASRAHQHAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 432 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q+ S EDV F + KL Sbjct: 433 CAQA----SDEDVRFDALLAKL 450 >gi|108807199|ref|YP_651115.1| flagellum-specific ATP synthase [Yersinia pestis Antiqua] gi|108812457|ref|YP_648224.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516] gi|108776105|gb|ABG18624.1| flagellum-specific ATP synthase [Yersinia pestis Nepal516] gi|108779112|gb|ABG13170.1| flagellum-specific ATP synthase [Yersinia pestis Antiqua] Length = 506 Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R + + G+R I+ + GQ Sbjct: 169 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 227 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 228 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 287 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 288 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 347 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 348 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 407 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR D V L+ ++ RD+ +G Y G D Sbjct: 408 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLISVGAYAAGSDP 467 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + SS D Sbjct: 468 LLDKAIALYPQMEAFLQQGMFERSSFD 494 >gi|254228439|ref|ZP_04921865.1| flagellar protein export ATPase FliI [Vibrio sp. Ex25] gi|262393591|ref|YP_003285445.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25] gi|151939027|gb|EDN57859.1| flagellar protein export ATPase FliI [Vibrio sp. Ex25] gi|262337185|gb|ACY50980.1| flagellum-specific ATP synthase FliI [Vibrio sp. Ex25] Length = 439 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 137/319 (42%), Positives = 203/319 (63%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG L + + P + R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPLYTDHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGSAEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +D A P + ++L+QS Sbjct: 401 AIDGAFTLKPKLDEYLQQS 419 >gi|259907609|ref|YP_002647965.1| Flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96] gi|224963231|emb|CAX54715.1| Flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96] gi|283477451|emb|CAY73367.1| flagellum-specific ATP synthase [Erwinia pyrifoliae DSM 12163] Length = 454 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 137/319 (42%), Positives = 200/319 (62%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A G+P+DG + K + + P ++R ++ G+R I+ + GQ Sbjct: 115 GRVLDAQGRPLDGRPAPLKTRCASLFTQPINP-LHRDPIKSVLDVGVRAINGLLTVGRGQ 173 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + ++++VV+ Sbjct: 174 RMGLFAGSGVGKSVLLGMMARFTDADVIVVGLIGERGREVKDFIENILGAEGIERAVVIA 233 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR + A +AE F +G NVLLI+DS+TRFA + RE+A GE P +G Sbjct: 234 APADVSPVLRMQGAVYATRLAEDFRDRGMNVLLIMDSLTRFAMAQREVALAIGEPPATKG 293 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 294 YPPSVFARLPALVERAGNGVAGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 353 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + + + V S + ++ D+ +G Y G D Sbjct: 354 LAESGHYPAIDIEASISRAMTELIPHAQYRKVQSFKQQLSSYQRNSDLVSVGAYVSGSDA 413 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +LD+A+ + P + FL QS Sbjct: 414 LLDRAIARYPQMESFLHQS 432 >gi|221200561|ref|ZP_03573603.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia multivorans CGD2M] gi|221209218|ref|ZP_03582209.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia multivorans CGD2] gi|221170908|gb|EEE03364.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia multivorans CGD2] gi|221179902|gb|EEE12307.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia multivorans CGD2M] Length = 459 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 160/382 (41%), Positives = 221/382 (57%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 77 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 135 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 136 GPVTGATWVSTQQDPPNPLARRMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 195 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 196 LGMIARGAQADVNVIALVGERGREVREFIEHALSPEVRARSIVVVSTSDRPAMERVKSAL 255 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 256 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 315 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 316 AG--QGAAGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 373 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S ++ + + LI +++E + IG YR G D + D A+ I F Sbjct: 374 LSRVMPLVASRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRAREAIGAF 433 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q+ EDV F + KL Sbjct: 434 CAQA----QHEDVRFDALLAKL 451 >gi|317492411|ref|ZP_07950840.1| flagellar protein export ATPase FliI [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919750|gb|EFV41080.1| flagellar protein export ATPase FliI [Enterobacteriaceae bacterium 9_2_54FAA] Length = 453 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 143/319 (44%), Positives = 196/319 (61%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ KP+DG + D+ S+ M P + R + G+R I+ + G Sbjct: 116 GRVLDGGAKPLDGLPPPEEADVGSLTTMPFNP--LQRTPIVDVLDVGVRAINALLTVGRG 173 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LGD K+SVV+ Sbjct: 174 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGDEGRKRSVVI 233 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P + Sbjct: 234 AAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 293 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 294 GYPPSVFAKLPALVERAGNGTHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 353 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D AS+SR S D V L+ ++ RD+ +G Y G D Sbjct: 354 RLAEAGHYPAIDIEASISRAMTSLISDDHYARVRRFKQLLSSYQRNRDLISVGAYAKGSD 413 Query: 401 LILDKAVHQVPIIYDFLKQ 419 +LD+A+ P + FL+Q Sbjct: 414 PMLDQAITLYPHLEAFLQQ 432 >gi|241763652|ref|ZP_04761702.1| ATPase FliI/YscN [Acidovorax delafieldii 2AN] gi|241367127|gb|EER61493.1| ATPase FliI/YscN [Acidovorax delafieldii 2AN] Length = 464 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 143/342 (41%), Positives = 208/342 (60%), Gaps = 4/342 (1%) Query: 87 VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGF 145 V G R+ GRV+++ G P+D + D++ E M + AM+R V + Sbjct: 111 VQRAGVLRLPMGEGLLGRVVDSQGLPLDHGGPVQ--DVASEPMDRRQINAMDRDPVREPL 168 Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREF 205 TG+R I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EF Sbjct: 169 DTGVRAINALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKEF 228 Query: 206 IEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264 +ED LG+ + +SVVV A +D P+LR A +AE+F KG +VLL++DS+TR+A Sbjct: 229 VEDILGEEGRARSVVVAAPADAPPLLRMQGAAYATAVAEHFRDKGKHVLLLMDSLTRYAM 288 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + REIA GE P +GYP S F++LP+L+ER G G+ITA +VL +GD+ DPI Sbjct: 289 AQREIALAIGEPPATKGYPPSCFAKLPQLVERSGNGLHGVGSITAFYTVLSEGDDQQDPI 348 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384 AD+ R+ILDGHIVL+R+LAE G +P +D S SR+ S + L + R++ Sbjct: 349 ADAARAILDGHIVLSRALAETGHFPAIDIEQSASRVMHNVVSREHFDLARRFRAVYSRYQ 408 Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 ++RD+ +G Y G D LD+A+ P + FL+Q D +S Sbjct: 409 KSRDLVQVGAYMSGSDPALDEAIRLQPQMAAFLQQDMFDATS 450 >gi|149366225|ref|ZP_01888260.1| flagellum-specific ATP synthase [Yersinia pestis CA88-4125] gi|162420008|ref|YP_001606482.1| flagellum-specific ATP synthase [Yersinia pestis Angola] gi|165925906|ref|ZP_02221738.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Orientalis str. F1991016] gi|165938730|ref|ZP_02227285.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Orientalis str. IP275] gi|166010789|ref|ZP_02231687.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Antiqua str. E1979001] gi|166210732|ref|ZP_02236767.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Antiqua str. B42003004] gi|167400998|ref|ZP_02306501.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420359|ref|ZP_02312112.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425827|ref|ZP_02317580.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218928948|ref|YP_002346823.1| flagellum-specific ATP synthase [Yersinia pestis CO92] gi|229896273|ref|ZP_04511443.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Pestoides A] gi|229897210|ref|ZP_04512366.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar Orientalis str. PEXU2] gi|229897937|ref|ZP_04513088.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar Orientalis str. India 195] gi|229902832|ref|ZP_04517949.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Nepal516] gi|270486618|ref|ZP_06203692.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27] gi|294504006|ref|YP_003568068.1| flagellum-specific ATP synthase [Yersinia pestis Z176003] gi|115347559|emb|CAL20468.1| flagellum-specific ATP synthase [Yersinia pestis CO92] gi|149292638|gb|EDM42712.1| flagellum-specific ATP synthase [Yersinia pestis CA88-4125] gi|162352823|gb|ABX86771.1| flagellar protein export ATPase FliI [Yersinia pestis Angola] gi|165913344|gb|EDR31966.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Orientalis str. IP275] gi|165922110|gb|EDR39287.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Orientalis str. F1991016] gi|165990133|gb|EDR42434.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Antiqua str. E1979001] gi|166207912|gb|EDR52392.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Antiqua str. B42003004] gi|166962054|gb|EDR58075.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049387|gb|EDR60795.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055226|gb|EDR65023.1| flagellar protein export ATPase FliI [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680279|gb|EEO76378.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Nepal516] gi|229688978|gb|EEO81043.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar Orientalis str. India 195] gi|229693547|gb|EEO83596.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701196|gb|EEO89225.1| Flagellum-specific ATP synthase fliI [Yersinia pestis Pestoides A] gi|262366055|gb|ACY62612.1| flagellum-specific ATP synthase [Yersinia pestis D182038] gi|270335122|gb|EFA45899.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27] gi|294354465|gb|ADE64806.1| flagellum-specific ATP synthase [Yersinia pestis Z176003] gi|320015434|gb|ADV99005.1| Flagellum-specific ATP synthase fliI [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 484 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R + + G+R I+ + GQ Sbjct: 147 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 205 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 206 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 265 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 266 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 325 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 326 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 385 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR D V L+ ++ RD+ +G Y G D Sbjct: 386 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLISVGAYAAGSDP 445 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + SS D Sbjct: 446 LLDKAIALYPQMEAFLQQGMFERSSFD 472 >gi|238897372|ref|YP_002923049.1| type III secretion system ATPase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465127|gb|ACQ66901.1| type III secretion system ATPase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 446 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 143/323 (44%), Positives = 202/323 (62%), Gaps = 5/323 (1%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S GR++N LG PID LG S++ + P + R+ + TGIR +D Sbjct: 107 SMSLMGRILNGLGHPIDDGPGLGYHWRSLD--NAPPDPLKRKPITDQLVTGIRSLDAILS 164 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-K 216 GQRIG+FA +G+GKSTLL M D ++++L+GERGREVREF+E L + + Sbjct: 165 CGEGQRIGIFAAAGVGKSTLLGMLCDGSDADVMVLALIGERGREVREFLEQVLTPKARQR 224 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +VVVVATSD + R TA TIAEYF G V+L++DS+TR+A + REI +GE Sbjct: 225 TVVVVATSDRPALERLKGIYTATTIAEYFRDCGKKVVLMVDSLTRYARAAREIGLAAGEP 284 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A +P SVF+++PRLLER G S+ G+ITA +VLV+GD+ N+P+AD VRS+LDGHI Sbjct: 285 PAAGSFPPSVFAQMPRLLERTGNSDL--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHI 342 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 +L+R LA G YP +D ASVSR+ + S+ ++ L ++ R+EE + +G Y+ Sbjct: 343 ILSRKLAGAGHYPAIDIAASVSRIMPQIASSWHLEMAQKLRFILARYEEIELLVRVGEYQ 402 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G DL D A+ + P + +FLKQ Sbjct: 403 KGQDLEADDALKRYPAVCNFLKQ 425 >gi|254496584|ref|ZP_05109452.1| flagellum-specific ATP synthase FliI [Legionella drancourtii LLAP12] gi|254354208|gb|EET12875.1| flagellum-specific ATP synthase FliI [Legionella drancourtii LLAP12] Length = 446 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 147/361 (40%), Positives = 216/361 (59%), Gaps = 3/361 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSL 119 +V+ + VY+ +G + ++ G ++ GR ++ GR++N G ID + Sbjct: 63 EVVGFGNERVYLMSIGNIQGLAPGMIITPTGRVAQVEIGWSLLGRIVNGSGTLIDDGPPI 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + + P + R ++ GIR I+ + GQRIG+FAGSG+GKS LL Sbjct: 123 ELSETYPLECAAINP-LKRAAIDTYLDVGIRAINGLITIGRGQRIGLFAGSGVGKSVLLG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTA 238 M R D V++ L+GERGREV+EFIE LG+ LK++VVV A +DESP+ R A Sbjct: 182 MMTRFTKADVVVVGLIGERGREVKEFIECSLGEEGLKRAVVVAAPADESPLRRLHGAKVA 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +IAEYF +G +VLL++DS+TRFA + REIA + GE P +GYP SVF++LP+L+ER G Sbjct: 242 TSIAEYFRDQGKHVLLLMDSLTRFAQAQREIALSIGEAPATKGYPPSVFAKLPKLVERAG 301 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RSLAEEG+YP +D AS+S Sbjct: 302 NGALGSGSITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRSLAEEGQYPAIDLEASIS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + + + +E+ +D L+G Y G D LDKA+ I +++ Sbjct: 362 RVMQTVVPEQQMNDMLLFKKYLSLYEKNKDFILLGAYVKGSDPNLDKAILARDKIRKYME 421 Query: 419 Q 419 Q Sbjct: 422 Q 422 >gi|115358971|ref|YP_776109.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria AMMD] gi|170702397|ref|ZP_02893286.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria IOP40-10] gi|115284259|gb|ABI89775.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria AMMD] gi|170132691|gb|EDT01130.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria IOP40-10] Length = 461 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 79 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 137 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 138 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 197 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 198 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 257 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 258 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 317 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 318 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 375 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S ++ + + LI +++E + IG YR G D + D A+ I F Sbjct: 376 LSRVMPLVASRAHQQSAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 435 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q S EDV F + KL Sbjct: 436 CAQG----SHEDVRFDALLAKL 453 >gi|323491448|ref|ZP_08096632.1| flagellum-specific ATP synthase [Vibrio brasiliensis LMG 20546] gi|323314317|gb|EGA67397.1| flagellum-specific ATP synthase [Vibrio brasiliensis LMG 20546] Length = 440 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 137/319 (42%), Positives = 202/319 (63%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTEKRASFNAEPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R Sbjct: 281 YPPSVFAKLPALVERAGNGSPEQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + S + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITSEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +D A P + +L+QS Sbjct: 401 AIDGAFTLKPKLDTYLQQS 419 >gi|238793334|ref|ZP_04636960.1| secretion system apparatus ATP synthase ssaN [Yersinia intermedia ATCC 29909] gi|238727303|gb|EEQ18831.1| secretion system apparatus ATP synthase ssaN [Yersinia intermedia ATCC 29909] Length = 433 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 10/369 (2%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGK 111 + D L +V+ I + P + G V H R ++ PS GRV++ LG Sbjct: 46 SPDMLAEVVAIEQQTALLSPFTSSAGLRSGQWVSPLGHSHRVKVGPS--LLGRVLDGLGG 103 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 +DG SL G E+ + P + RQ + + TGIR ID GQR+G+FA +G Sbjct: 104 AMDGGPSL-IGHWR-ELDCQPPEPLARQPIRQILTTGIRAIDGVLSCGEGQRVGIFAAAG 161 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPIL 230 +GKS+LLSM D ++++L+GERGREVREF++ L + ++VVVVATSD + Sbjct: 162 VGKSSLLSMLCAGSNADVMVLALIGERGREVREFLDQVLTPETRARTVVVVATSDRPALE 221 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R TA T+AEYF +G VLL++DS+TR+A + REI +GELP A +P SVF+ L Sbjct: 222 RLKGIYTATTVAEYFRERGLKVLLMVDSLTRYARAAREIGLAAGELPAAGSFPPSVFAAL 281 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 PRLLER G SE G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R LA G YP Sbjct: 282 PRLLERAGNSEC--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSRRLAGAGHYPA 339 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410 +D ASVSR+ + + + L L + ++E + +G Y+ G D D A+ + Sbjct: 340 IDIAASVSRIMPQIVTVEHLALAQKLRQIQACYQEIELLVRVGEYQAGQDPQADDALQRY 399 Query: 411 PIIYDFLKQ 419 P I FL+Q Sbjct: 400 PKICAFLQQ 408 >gi|203284209|ref|YP_002221949.1| flagellum-specific ATP synthase [Borrelia duttonii Ly] gi|201083652|gb|ACH93243.1| flagellum-specific ATP synthase [Borrelia duttonii Ly] Length = 436 Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 142/341 (41%), Positives = 221/341 (64%), Gaps = 5/341 (1%) Query: 81 ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 + +GD V+ + +I+ S GRVI++LG+PID + S + P ++R Sbjct: 79 VEVGDKVYSLNKKPQINLSDELLGRVIDSLGRPIDNKGPFFGNNYKELSFSSINP-LDRG 137 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 + TG+RV+D F P+ GQR+G+F+G+G+GKSTLL M A++ D +I+ +GERG Sbjct: 138 VFTEQIVTGVRVLDGFLPVARGQRVGIFSGAGVGKSTLLGMIAKNSKADVNVIAFIGERG 197 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 RE+ EFI+ LG+ +SV++V+TSDESPI R TA +AEYF G +V+L+ DS Sbjct: 198 RELNEFIKYELGNGCFNRSVLIVSTSDESPISRYKGAYTATLVAEYFRDCGMDVMLLFDS 257 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 ITRFA++ REI+ + GE P +GYP SVF E+P LLER G + KG+IT +VLV+GD Sbjct: 258 ITRFANAKREISLSMGEPPATKGYPPSVFVEIPILLERSGLN--AKGSITGFYTVLVEGD 315 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + ++PI+D+++++LDGHI+L+R L+++G YP V+ L S SR + + +++KL+S + + Sbjct: 316 DFSEPISDNMKAVLDGHIILDRDLSDKGIYPSVNILNSTSRSLHRIVNFEKQKLISKIRN 375 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L+ ++ D+ G Y G + +D A+ + P I DFL Q Sbjct: 376 LLSIYKSYEDLIKTGIYVKGSNKEVDLAIAKYPKIIDFLSQ 416 >gi|170024619|ref|YP_001721124.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis YPIII] gi|169751153|gb|ACA68671.1| ATPase, FliI/YscN family [Yersinia pseudotuberculosis YPIII] Length = 472 Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 142/327 (43%), Positives = 197/327 (60%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R + + G+R I+ + GQ Sbjct: 135 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 193 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 194 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 253 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 254 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 313 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 314 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 373 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR D V L ++ RD+ +G Y G D Sbjct: 374 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLFASYQRNRDLVSVGAYAAGSDP 433 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + SS D Sbjct: 434 LLDKAIALYPQMEAFLQQGMFERSSFD 460 >gi|329298596|ref|ZP_08255932.1| flagellum-specific ATP synthase [Plautia stali symbiont] Length = 451 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 143/327 (43%), Positives = 196/327 (59%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ GKP+DG + G + I + P + R + TG+R I+ + GQ Sbjct: 115 GRVLDGSGKPLDGLPAPETGYRAPLITAPFNP-LQRTPIHDVLDTGVRAINALLTVGRGQ 173 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE+ LG + +SVV+ Sbjct: 174 RMGLFAGSGVGKSVLLGMMARYTKTDVIVVGLIGERGREVKEFIENILGAEGRARSVVIA 233 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 234 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 293 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHI L+R Sbjct: 294 YPPSVFAKLPALVERAGNGIHGCGSITAFYTVLTEGDDQQDPIADSARAILDGHIALSRR 353 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR V L+ F+ RD+ +G Y G D Sbjct: 354 LAEAGHYPAIDIEASISRAMTALIDETHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSDP 413 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LD+A+ P + FL+Q + S D Sbjct: 414 MLDRAIKLYPQMEAFLQQGIFERSDYD 440 >gi|308187293|ref|YP_003931424.1| flagellum-specific ATP synthase [Pantoea vagans C9-1] gi|308057803|gb|ADO09975.1| flagellum-specific ATP synthase [Pantoea vagans C9-1] Length = 456 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 141/319 (44%), Positives = 193/319 (60%), Gaps = 2/319 (0%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+P+DG S G + I P + R + TG+R I+ + G Sbjct: 116 LGRVLDGSGRPLDGLPSPDTGYRAPLITPPFNP-LQRTPITDVLDTGVRAINALLTVGRG 174 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 175 QRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGAEGRARSVVI 234 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P + Sbjct: 235 AAPADVSPLLRMQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIALAIGEPPATK 294 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 295 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 354 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 L E G YP +D AS+SR + V L+ F+ RD+ +G Y G D Sbjct: 355 RLGEAGHYPAIDIEASISRAMTSLIDENHYAQVRQFKQLLSSFQRNRDLVSVGAYAAGSD 414 Query: 401 LILDKAVHQVPIIYDFLKQ 419 +LDKA+ P + FL+Q Sbjct: 415 PMLDKAIRLYPQMEAFLQQ 433 >gi|254506927|ref|ZP_05119066.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus 16] gi|219550212|gb|EED27198.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus 16] Length = 440 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 137/319 (42%), Positives = 202/319 (63%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTEKRASFNAQPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R Sbjct: 281 YPPSVFAKLPALVERAGNGSPEQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + S + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITSEEHVLMSKAVRQVLSVCRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +D A P + +L+QS Sbjct: 401 AIDGAFTIKPKLDAYLQQS 419 >gi|298530640|ref|ZP_07018042.1| ATPase, FliI/YscN family [Desulfonatronospira thiodismutans ASO3-1] gi|298510014|gb|EFI33918.1| ATPase, FliI/YscN family [Desulfonatronospira thiodismutans ASO3-1] Length = 471 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 154/371 (41%), Positives = 224/371 (60%), Gaps = 8/371 (2%) Query: 70 VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V P G I G L+ + + P + + G+ ++A G P++ D S+ Sbjct: 70 VLFMPYGDMRGIKPGSLIRNSSMPPLFPVGSKYLGKAVDAFGTPLEDDGSIIPQKYYPLY 129 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + + P M R R+++ GI+ I+ L GQR+G+ AGSG+GKST + M AR D Sbjct: 130 AAPLNP-MQRPRIDEPLDVGIKSINSLLTLGKGQRVGIMAGSGVGKSTAMGMMARYTEAD 188 Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+LVGERGREV EFI+ LG + + +SV+VVATSD+ P++R A A +AEYF Sbjct: 189 VNVIALVGERGREVLEFIDKDLGPEGMARSVLVVATSDQGPLIRMRAAYAATAMAEYFRD 248 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G +VLL++DS+TRFA + RE+ +GE P RGY +VFS LP+LLER G S K G+I Sbjct: 249 QGKDVLLMMDSVTRFAMAAREVGLAAGEPPTTRGYTPTVFSHLPKLLERTGKSGK--GSI 306 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T + +VLV+GD+ N+P+AD+VRSILDGHIVL R LA++G +P +D L SVSRL Sbjct: 307 TGIYTVLVEGDDFNEPVADAVRSILDGHIVLTRELADQGHFPAIDVLKSVSRLRKDVTPE 366 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSE 427 D K + L+ +E+ D+ IG Y G + +D+AV V I DFL+Q D+ + Sbjct: 367 DVVKAGQKVIRLLAAYEKVEDMINIGAYVKGSNQEIDQAVRLVRPINDFLRQ---DIEEK 423 Query: 428 DVFQEITKKLQ 438 Q+ +++Q Sbjct: 424 FTLQQSFQQMQ 434 >gi|239996426|ref|ZP_04716950.1| flagellum-specific ATP synthase [Alteromonas macleodii ATCC 27126] Length = 444 Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 157/409 (38%), Positives = 228/409 (55%), Gaps = 12/409 (2%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75 S +V G + I V C + +G + Q + +V+ DI Y+ P Sbjct: 18 SPPVVAAGKLVRGIGLTLEAVGC---QLPVGSQCLVQTIEGEIEAEVVGFGDDITYLMPT 74 Query: 76 GIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134 I G V R P GRV++ G+P+DG LG+ + + PP Sbjct: 75 EAVRGIVPGSRVMPLNRQSGLPVGMGLLGRVVDGNGQPLDG---LGEINAEARAPTTRPP 131 Query: 135 AMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 MN R+ + G+R I+ + GQR+G+FAGSG+GKS LL M R D V+ Sbjct: 132 -MNPLIRRPINTPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSVLLGMMTRGCEADVVV 190 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 + LVGERGREV+EFI + L + +++VVV A +D SP++R TAVTIAEYF KG Sbjct: 191 VGLVGERGREVKEFIHEILTEEERQRAVVVAAPADTSPLMRLKGCETAVTIAEYFRDKGM 250 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TR+A + REIA GE P +GYP SVF+ LP L+ER G + +G+ITA Sbjct: 251 KVLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGSERQGSITAF 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VL +GD+ DPIAD+ R+ILDGH+VL+R+LA+ G YP +D AS+SR+ S + + Sbjct: 311 YTVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEASISRVMPMVVSEEHQ 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + + + +++ +D+ IG Y G D +D A+ P I L+Q Sbjct: 371 LMARRIRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINALLQQ 419 >gi|153949483|ref|YP_001401262.1| flagellum-specific ATP synthase [Yersinia pseudotuberculosis IP 31758] gi|152960978|gb|ABS48439.1| flagellar protein export ATPase FliI [Yersinia pseudotuberculosis IP 31758] Length = 472 Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R + + G+R I+ + GQ Sbjct: 135 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 193 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 194 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 253 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 254 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 313 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 314 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 373 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR D V L+ ++ RD+ +G Y G D Sbjct: 374 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLVSVGAYAAGSDP 433 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + SS D Sbjct: 434 LLDKAIALYPQMEIFLQQGMFERSSFD 460 >gi|22126362|ref|NP_669785.1| flagellum-specific ATP synthase [Yersinia pestis KIM 10] gi|45441383|ref|NP_992922.1| flagellum-specific ATP synthase [Yersinia pestis biovar Microtus str. 91001] gi|21959346|gb|AAM86036.1|AE013851_8 flagellum-specific ATP synthase [Yersinia pestis KIM 10] gi|45436243|gb|AAS61799.1| flagellum-specific ATP synthase [Yersinia pestis biovar Microtus str. 91001] Length = 492 Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 142/327 (43%), Positives = 198/327 (60%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I + P + R + + G+R I+ + GQ Sbjct: 155 GRVLDGSAKPLDGLPAPETGYRAPLITPPINP-LQRTAIVQVLDVGVRTINALLTVGRGQ 213 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 214 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 273 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 274 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 333 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 334 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 393 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR D V L+ ++ RD+ +G Y G D Sbjct: 394 LAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQFKQLLASYQRNRDLISVGAYAAGSDP 453 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + SS D Sbjct: 454 LLDKAIALYPQMEAFLQQGMFERSSFD 480 >gi|33592499|ref|NP_880143.1| flagellum-specific ATP synthase FliI [Bordetella pertussis Tohama I] gi|33572145|emb|CAE41689.1| flagellum-specific ATP synthase FliI [Bordetella pertussis Tohama I] gi|332381917|gb|AEE66764.1| flagellum-specific ATP synthase FliI [Bordetella pertussis CS] Length = 477 Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 203/329 (61%), Gaps = 6/329 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L + + + P ++R ++ G+R I+ + Sbjct: 128 AMLGRVVDGAGRPLDGLGPLAGAEQAPLTALPINP-LSRAPIDSVLDVGVRAINGLLTVG 186 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SV Sbjct: 187 RGQRMGLFAGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSV 246 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP+LR A +AE+F +G +VLLI+DS+TRFA + REIA GE P Sbjct: 247 VVAAPADVSPLLRLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPA 306 Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334 +GYP SVF++LP L+ER G P K G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 307 TKGYPPSVFAKLPALVERTGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 366 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 H+VL+R LAE G YP +D AS+SR + ++ + V ++ R++ RD+ +G Sbjct: 367 HVVLSRHLAEAGHYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGA 426 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 Y G D LD A+ + P + +L+Q+ D Sbjct: 427 YVAGADPQLDDAIARYPRLEAYLQQNIGD 455 >gi|33601562|ref|NP_889122.1| flagellum-specific ATP synthase FliI [Bordetella bronchiseptica RB50] gi|33575998|emb|CAE33078.1| flagellum-specific ATP synthase FliI [Bordetella bronchiseptica RB50] Length = 491 Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 141/329 (42%), Positives = 203/329 (61%), Gaps = 6/329 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L + + + P ++R ++ G+R I+ + Sbjct: 142 AMLGRVVDGAGRPLDGLGPLAGAEQAPLTALPINP-LSRAPIDSVLDVGVRAINGLLTVG 200 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SV Sbjct: 201 RGQRMGLFAGSGVGKSVLLGMMARYTRADIIVVGLIGERGREVKEFIEHNLGPEGLARSV 260 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP+LR A +AE+F +G +VLLI+DS+TRFA + REIA GE P Sbjct: 261 VVAAPADVSPLLRLQGASYATRLAEHFRDQGLDVLLIMDSLTRFAMAQREIALAIGEPPA 320 Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334 +GYP SVF++LP L+ER G P K G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 321 TKGYPPSVFAKLPALVERTGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 380 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 H+VL+R LAE G YP +D AS+SR + ++ + V ++ R++ RD+ +G Sbjct: 381 HVVLSRHLAEAGHYPAIDIEASISRAMTSLITTEQFQQVRRFKQILSRYQRNRDLISVGA 440 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 Y G D LD A+ + P + +L+Q+ D Sbjct: 441 YVAGADPQLDDAIARYPRLEAYLQQNIGD 469 >gi|172063763|ref|YP_001811414.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria MC40-6] gi|171996280|gb|ACB67198.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia ambifaria MC40-6] Length = 461 Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 79 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEALFGRVLDGLGRPLD-DR 137 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 138 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 197 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 198 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 257 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 258 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 317 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 318 AG--QGATGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 375 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S ++ + + LI +++E + IG YR G D + D A+ I F Sbjct: 376 LSRVMPLVASRAHQQSAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 435 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q S EDV F + KL Sbjct: 436 CAQG----SHEDVRFDALLAKL 453 >gi|293605024|ref|ZP_06687418.1| flagellum-specific ATP synthase FliI [Achromobacter piechaudii ATCC 43553] gi|292816573|gb|EFF75660.1| flagellum-specific ATP synthase FliI [Achromobacter piechaudii ATCC 43553] Length = 499 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 145/345 (42%), Positives = 209/345 (60%), Gaps = 11/345 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L +L+ + P ++R ++ TG+R I+ + Sbjct: 150 ALLGRVLDGAGRPLDGLGPLTGAELAPLSAQPINP-LSRAPIDTVLDTGVRAINGLLTVG 208 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SV Sbjct: 209 RGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKEFIEHNLGPEGLARSV 268 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D S +LR A +AE+F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 269 VVAAPADVSALLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPA 328 Query: 279 ARGYPTSVFSELPRLLERIG-----PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 +GYP SVF++LP L+ER G PS K G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 329 TKGYPPSVFAKLPMLVERAGMGAPGPSGK-AGSITAFYTVLAEGDDQQDPIADSARAILD 387 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GH+VL+R LAE G YP +D AS+SR + + +V + R++ RD+ +G Sbjct: 388 GHVVLSRHLAEAGHYPAIDIEASISRAMTSLITPQQFAIVRRFKQNLSRYQRNRDLIAVG 447 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 Y G D LD+A+ + P + FL+Q D+ + E +L+ Sbjct: 448 AYAAGNDPQLDEAIARYPRLEAFLQQ---DIGENIGYDEAVNQLR 489 >gi|308050033|ref|YP_003913599.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM 9799] gi|307632223|gb|ADN76525.1| flagellar protein export ATPase FliI [Ferrimonas balearica DSM 9799] Length = 440 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 148/337 (43%), Positives = 216/337 (64%), Gaps = 4/337 (1%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+PIDG L K LS I + P + R+ ++ G+R I+ + G Sbjct: 99 GRVLDGCGEPIDGLGPLHKVRSLSGRIHTPNP--LLRRPIDAPLDVGVRAINSLLTVGKG 156 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M R D V++ LVGERGREVREFIE LG + +++VVV Sbjct: 157 QRLGLFAGSGVGKSVLLGMMTRFTQADIVVVGLVGERGREVREFIEHSLGPEGRQRAVVV 216 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 VA +D + ++R A IA F +G +VLL++DS+TR+A + RE+A + GE P R Sbjct: 217 VAPADATALMRLRAMRLCHRIAAGFRDEGHDVLLLVDSLTRYAQAQREVALSLGEPPATR 276 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP S F++LP L+E+ G E +G++TA+ +VLV+GD+ NDP+AD+ R+ILDGHIVL+R Sbjct: 277 GYPPSAFTQLPSLVEQAGNGEGGQGSLTALYTVLVEGDDQNDPVADAARAILDGHIVLSR 336 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE+G +P +D AS SRLA + ++ + L HL R++E R++ +GGY+PG D Sbjct: 337 ALAEQGHFPAIDVNASASRLAAQLVEPEDLAAMQRLRHLNARYQEVRELLPLGGYQPGQD 396 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 LD AV P I FL+Q ++ +E ++L Sbjct: 397 AELDLAVQAQPAIAQFLRQGMNESQDYQASREALRQL 433 >gi|116692941|ref|YP_838474.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia cenocepacia HI2424] gi|116650941|gb|ABK11581.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia cenocepacia HI2424] Length = 458 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 76 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEGLFGRVLDGLGRPLD-DR 134 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 135 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 194 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 195 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 254 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 255 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 314 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 315 AG--QGAHGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 372 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S + + + LI +++E + IG YR G D + D A+ I F Sbjct: 373 LSRVMPLVASRAHQHAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 432 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q+ S EDV F + KL Sbjct: 433 CAQA----SDEDVRFDALLAKL 450 >gi|238786394|ref|ZP_04630322.1| secretion system apparatus ATP synthase ssaN [Yersinia bercovieri ATCC 43970] gi|238712702|gb|EEQ04786.1| secretion system apparatus ATP synthase ssaN [Yersinia bercovieri ATCC 43970] Length = 429 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 159/405 (39%), Positives = 228/405 (56%), Gaps = 18/405 (4%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSA 99 V LG+ Q + D L +V+ I + P + G V H R R P Sbjct: 32 VALGELC--QVEAPDMLAEVVAIEQKTALLSPFAPPAGLRCGQWVRPLGHSHRIRTGPD- 88 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID L +G E+ S P + RQ +++ TGIR +D Sbjct: 89 -LLGRILDGLGVPIDSGPPL-RGHWC-ELDSAPPDPLARQPIDQILTTGIRAVDGLLSCG 145 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218 GQRIG+FA +G+GKSTLLSM + ++++L+GERGREVREF++ L + ++V Sbjct: 146 EGQRIGIFAAAGVGKSTLLSMLCAGSRAEVMVLALIGERGREVREFLDQVLTPEARARTV 205 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VVVATSD + R TA +AEYF +G VLL+ DS+TR+A + REI +GELP Sbjct: 206 VVVATSDRPALERLKGIYTATRVAEYFRDRGLKVLLMADSLTRYARAAREIGLAAGELPA 265 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A +P SVF+ LPRLLER G S + G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL Sbjct: 266 AGSFPPSVFAALPRLLERAGNSAQ--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVL 323 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LA G YP +D ASVSR+ + + + L L + ++E + +G Y+ G Sbjct: 324 SRKLAGAGHYPAIDIAASVSRIMPQIVTDEHLALAQKLRQMQACYQEIELLVRVGEYQAG 383 Query: 399 VDLILDKAVHQVPIIYDFLKQ------SPSDLSSEDVFQEITKKL 437 D D+A+ + P I FL+Q +P +S ++ + L Sbjct: 384 DDPQADEALARYPTICAFLQQENRLSCNPDAVSLSSTLAQLAQAL 428 >gi|78485780|ref|YP_391705.1| ATPase FliI/YscN [Thiomicrospira crunogena XCL-2] gi|78364066|gb|ABB42031.1| Flagellar biosynthesis ATPase FliI [Thiomicrospira crunogena XCL-2] Length = 446 Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 152/411 (36%), Positives = 237/411 (57%), Gaps = 17/411 (4%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL-GQVIRINLDIVYICPVG 76 NL ++G + + T+ + Y +G KN + +V+ N D +Y+ P+G Sbjct: 26 NLQIEGRLVRMVG---MTLEVVGTYAPIGSRCQVLSKNEPPIEAEVVGFNDDRLYLMPIG 82 Query: 77 IGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM-----S 130 + V G ++ S+ GR+I+ G P+D KG +S + Sbjct: 83 KIHGLEPNARVIPVSGGIKVGVSSSMLGRIIDGAGNPLDD-----KGPISFDKRVSLNGD 137 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 K+ P ++R +++ GI+ I+ L GQR+G+ AG+G+GKS LL M R + V Sbjct: 138 KINP-LHRAPIKEPLDVGIKTINGLLTLGKGQRVGLLAGTGVGKSVLLGMMTRFTDAEVV 196 Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 ++ LVGERGREV +F+ + LG+ LK+SVVV +D+ P++R + A ++AEYF +G Sbjct: 197 VVGLVGERGREVNDFVRNNLGEEGLKRSVVVATPADDPPLMRLHGAMLATSVAEYFRDQG 256 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 NVLL++DS+TRFA + REIA GE P ++GYP SVF++LP+L+ER G G+ITA Sbjct: 257 KNVLLLMDSLTRFAQAQREIALAVGEPPASKGYPPSVFAKLPQLVERAGNGASHSGSITA 316 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VL +GD+ NDP+ DS R +LDGHI+L+R +A+ GRYP +D AS+SR+ + Sbjct: 317 IYTVLAEGDDQNDPVVDSARGVLDGHILLSRQIADSGRYPAIDIEASISRVMIDVVPQQQ 376 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 KL L +++ +D+ IG YR G D +D+A+ + P + FL QS Sbjct: 377 NKLARRFKQLYSTYQQNQDLISIGAYRKGTDAAIDEAIEKHPQLSHFLSQS 427 >gi|304398858|ref|ZP_07380728.1| flagellar protein export ATPase FliI [Pantoea sp. aB] gi|304353562|gb|EFM17939.1| flagellar protein export ATPase FliI [Pantoea sp. aB] Length = 456 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 143/330 (43%), Positives = 195/330 (59%), Gaps = 6/330 (1%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L D PP + R + TG+R I+ + Sbjct: 116 LGRVLDGSGRPLDG---LPSPDTGYRAPLNTPPFNPLQRTPITDVLDTGVRAINALLTVG 172 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGAEGRARSV 232 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIALAIGEPPA 292 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 293 TKGYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 352 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R L E G YP +D AS+SR + V L+ F+ RD+ +G Y G Sbjct: 353 SRRLGEAGHYPAIDIEASISRAMTHLIDENHYAQVRQFKQLLSSFQRNRDLVSVGAYAAG 412 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 D +LDKA+ P + FL+Q + S D Sbjct: 413 SDPMLDKAITLYPQMEAFLQQGIFERSDYD 442 >gi|206563889|ref|YP_002234652.1| type III secretion ssytem protein [Burkholderia cenocepacia J2315] gi|18092674|gb|AAL59403.1| BcscN [Burkholderia cenocepacia] gi|28394255|gb|AAO31730.1| BcscN [Burkholderia cenocepacia] gi|198039929|emb|CAR55907.1| type III secretion ssytem protein [Burkholderia cenocepacia J2315] Length = 457 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 161/382 (42%), Positives = 221/382 (57%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 75 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEGLFGRVLDGLGRPLD-DR 133 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 134 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 193 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 194 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 253 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 254 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 313 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 314 AG--QGAHGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 371 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S + + + LI +++E + IG YR G D + D A+ I F Sbjct: 372 LSRVMPLVASRAHQHAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 431 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q+ S EDV F + KL Sbjct: 432 CAQA----SDEDVRFDALLAKL 449 >gi|307546952|ref|YP_003899431.1| flagellar protein export ATPase FliI [Halomonas elongata DSM 2581] gi|307218976|emb|CBV44246.1| flagellar protein export ATPase FliI [Halomonas elongata DSM 2581] Length = 464 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 139/323 (43%), Positives = 200/323 (61%), Gaps = 6/323 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTP 157 GRV++ G P+D LG + + PP + R ++ GIR I+ Sbjct: 122 SLLGRVVDGNGDPLD---DLGPLEEAPRAPLAQPPFNPLARAPIDTQIDVGIRAINALLS 178 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-K 216 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FI++ LG + + + Sbjct: 179 VGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVQDFIDNILGAHGRER 238 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +VVV A +D SP+ R A IAE F +G +VLLI+DS+TR+A + REIA GE Sbjct: 239 AVVVAAPADTSPLQRLQGASYATRIAEGFRDQGHDVLLIMDSLTRYAMAQREIALAIGEP 298 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P +GYP SVF++LP L+ER G +E+ G+ITA +VL +GD+ DPIADS R+ILDGH+ Sbjct: 299 PATKGYPPSVFAKLPNLVERAGNAERGGGSITAFYTVLTEGDDQQDPIADSARAILDGHV 358 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R+LAE G YP +D AS+SR + +++ L R++ RD+ +G Y Sbjct: 359 VLSRTLAEAGHYPAIDIEASISRAMNAVIDDTQRRQAQRFKGLFSRYQRNRDLISVGAYH 418 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 PG D LD+AV + P + FL+Q Sbjct: 419 PGNDERLDEAVRRYPDLEAFLQQ 441 >gi|88704284|ref|ZP_01101998.1| flagellum-specific ATP synthase FliI [Congregibacter litoralis KT71] gi|88701335|gb|EAQ98440.1| flagellum-specific ATP synthase FliI [Congregibacter litoralis KT71] Length = 456 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 140/318 (44%), Positives = 200/318 (62%), Gaps = 4/318 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ G+ +DG + S+ + +K ++R+ + + G+R I+ F + GQ Sbjct: 113 GRVIDGAGRYLDGGPAP-HCSHSVALRAKALNPLDRRPIREPLDVGVRAINAFLTMGKGQ 171 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKSTLL M R D +++ LVGERGREVREFIED LG L +++VV Sbjct: 172 RLGLFAGSGVGKSTLLGMMTRHTEADVIVVGLVGERGREVREFIEDILGPQGLARAIVVA 231 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +D P++R A IAEYF +G +VLL++DS+TRFA + REI GE PV++G Sbjct: 232 TPADYPPLMRVHGAWRATAIAEYFRDQGRDVLLLMDSLTRFAQAQREIGLAVGEPPVSKG 291 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVFS LP L+ER G +G+ITAV +VLV+GD+HNDPIAD+ R+ILDGHIVL+R Sbjct: 292 YPPSVFSLLPNLVERAG--NGPEGSITAVYTVLVEGDDHNDPIADAARAILDGHIVLSRQ 349 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G +P +D ASVSR ++ L +L L + + RD+ IG Y G D Sbjct: 350 VADSGLFPAIDLEASVSRAMPGIADEGQQDLARALKELYSVYRQNRDLISIGAYEHGSDP 409 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D+A+ + ++Q Sbjct: 410 KIDQALRAHEPLRQIIRQ 427 >gi|239815259|ref|YP_002944169.1| ATPase, FliI/YscN family [Variovorax paradoxus S110] gi|239801836|gb|ACS18903.1| ATPase, FliI/YscN family [Variovorax paradoxus S110] Length = 460 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 166/375 (44%), Positives = 228/375 (60%), Gaps = 18/375 (4%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 L +V+ + V + P G E I+ G V G +I GRVI+ G+P+DG Sbjct: 65 LAEVVGLKPGRVTLMPYGPVEGIAAGCEVHALGADSQIGVGPAMLGRVIDGFGEPLDG-- 122 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 L K K P M R + + +TG+R ID L GQRIG+FAGSG+GKS Sbjct: 123 -LPKPVAIQRRPLKAAPINPMQRPPIRRILETGVRAIDGLLTLGQGQRIGIFAGSGVGKS 181 Query: 176 TLLSMFAR-------SDCFDKV-IISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226 TLL + AR +D + +I+L+GERGREVREFIE LG + L +SVVVVATSD+ Sbjct: 182 TLLGLLARHVKAQGGADGSGGINVIALIGERGREVREFIEKQLGPEGLARSVVVVATSDQ 241 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 + R A A++IAEYF +G NVLL +DSITRFA + RE+ ++GE P ARGY SV Sbjct: 242 PALARLRAAYAALSIAEYFRDEGRNVLLTMDSITRFAMARREVGLSAGEPPTARGYTPSV 301 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 F+ELP L ER G + G+ITA+++VLV+GD+ N+P++D++R+ILDGHIVL+R LA G Sbjct: 302 FAELPELCERCGMAPG-GGSITALLTVLVEGDDLNEPVSDALRAILDGHIVLSRQLAHRG 360 Query: 347 RYPPVDPLASVSRLADKAWSADEKKL-VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 YP +D L SVSRL + ++ L V+++ HL E R + IG Y G + LD+ Sbjct: 361 HYPAIDVLKSVSRLMPELADEAQRSLAVAAMQHLAV-LERNRQMIDIGAYEKGANAELDR 419 Query: 406 AVHQVPIIYDFLKQS 420 A+ P + +L+QS Sbjct: 420 AIDTEPGLQAWLRQS 434 >gi|294339865|emb|CAZ88228.1| flagellum-specific ATP synthase [Thiomonas sp. 3As] Length = 448 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 147/361 (40%), Positives = 221/361 (61%), Gaps = 3/361 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ N D V + +G + ++ G V G RI GRV++ G+P+DGD +L Sbjct: 65 EVVGFNGDHVQLMALGEVQGLTPGARVHPVPGDIRIPVGPELLGRVLDGNGRPLDGDGAL 124 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + ++ P + R V + G+R I+ + G R+G+FAGSG+GKS LL Sbjct: 125 LASHYTTLSTQQINP-LARALVRQPLDVGVRAINALFTVGRGARMGLFAGSGVGKSVLLG 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M AR+ D +++ L+GERGREV+EFIED LG + ++VVV A +D + R A Sbjct: 184 MMARNTNADVIVVGLIGERGREVKEFIEDILGVEGRSRAVVVAAPADAPALTRIRGARLA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +AEY+ +G NVLL++DS+TR+A ++RE+A +GE P ARG+P SVF++LP L+ER G Sbjct: 244 TAMAEYYRDQGLNVLLLMDSVTRYALALREVALAAGEPPAARGFPPSVFAKLPALVERAG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + G+ITA +VL++GD+ DP+AD+VR+ILDGHIVL+R LAE+G +P +D AS+S Sbjct: 304 NGPEGGGSITAFYTVLMEGDDQQDPVADNVRAILDGHIVLSRRLAEQGHFPAIDLQASIS 363 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + E + + L + R+ +D+ +G Y PG DL LD+AV I +FL Sbjct: 364 RVMPAIATPLELRRMQKLKEMQSRYASQQDLIAVGAYTPGADLQLDQAVQAHAGIREFLI 423 Query: 419 Q 419 Q Sbjct: 424 Q 424 >gi|126031489|pdb|2OBL|A Chain A, Structural And Biochemical Analysis Of A Prototypical Atpase From The Type Iii Secretion System Of Pathogenic Bacteria gi|126031490|pdb|2OBM|A Chain A, Structural And Biochemical Analysis Of A Prototypical Atpase From The Type Iii Secretion System Of Pathogenic Bacteria Length = 347 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 142/336 (42%), Positives = 201/336 (59%), Gaps = 2/336 (0%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G +I GR+I+ +G+P++ + + ++ P + RQ +++ F G+R Sbjct: 1 GSHKIRVGDALLGRLIDGIGRPMESNIVAPYLPFERSLYAEPPDPLLRQVIDQPFILGVR 60 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 ID GQRIG+FAGSG+GKSTLL M D ++++L+GERGREV EF+ Sbjct: 61 AIDGLLTCGIGQRIGIFAGSGVGKSTLLGMICNGASADIIVLALIGERGREVNEFLALLP 120 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 L K V+VV TSD + R A TA TIAEYF +G NVLL++DS+TR+A + R++ Sbjct: 121 QSTLSKCVLVVTTSDRPALERMKAAFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVG 180 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 SGE V G+P SVFS LP+LLER GP+ KG+ITA+ +VL++ DN NDPI D VRS Sbjct: 181 LASGEPDVRGGFPPSVFSSLPKLLERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRS 238 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 ILDGHIVL R LAEE +P +D S SR+ +++ + + LI ++ + Sbjct: 239 ILDGHIVLTRELAEENHFPAIDIGLSASRVMHNVVTSEHLRAAAECKKLIATYKNPELLI 298 Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 IG Y G D DKA+ +I +F++QS D+SS Sbjct: 299 RIGEYTMGQDPEADKAIKNRKLIQNFIQQSTKDISS 334 >gi|269103171|ref|ZP_06155868.1| flagellum-specific ATP synthase FliI [Photobacterium damselae subsp. damselae CIP 102761] gi|268163069|gb|EEZ41565.1| flagellum-specific ATP synthase FliI [Photobacterium damselae subsp. damselae CIP 102761] Length = 437 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 138/322 (42%), Positives = 207/322 (64%), Gaps = 10/322 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPL 158 GRVI+ +G P+DG GD+ + S PA+N R+ +++ G++ I+ + Sbjct: 101 GRVIDGVGNPLDG-----LGDIYTQHRASFSAPAINPLKRKPIKEPLDVGLKAINGCLTV 155 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKS 217 GQRIG+FAGSG+GKS L M R V++ L+GERGREV+EFI++ LG+ ++S Sbjct: 156 GKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIDEILGEEGRQRS 215 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VVV A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P Sbjct: 216 VVVAAPADASPLMRLKGCQTALTIAEYFRDQGQDVLLLMDSLTRFAQAQREIALSVGEPP 275 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP SVF++LP L+ER G ++ +G+ITA +VL +GD+ DPIAD+ R+ILDGHIV Sbjct: 276 ATKGYPPSVFAKLPALVERAGNGDENQGSITAFFTVLSEGDDLQDPIADASRAILDGHIV 335 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R +A+ G YP +D SVSR+ + + + ++ ++ + +D+ IG Y+P Sbjct: 336 LSREMADAGHYPAIDVERSVSRVMPAIVTEEHMIMAKAVRQILSICRKNQDLVAIGAYKP 395 Query: 398 GVDLILDKAVHQVPIIYDFLKQ 419 G D +D+A P + FL+Q Sbjct: 396 GTDPNIDQAFSLKPRLDGFLQQ 417 >gi|203287748|ref|YP_002222763.1| flagellum-specific ATP synthase [Borrelia recurrentis A1] gi|201084968|gb|ACH94542.1| flagellum-specific ATP synthase [Borrelia recurrentis A1] Length = 436 Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 142/341 (41%), Positives = 221/341 (64%), Gaps = 5/341 (1%) Query: 81 ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 I +GD V+ + +I+ S GRVI++LG+PID + S + P ++R Sbjct: 79 IKVGDKVYSLNKKPQINLSDELLGRVIDSLGRPIDNKGPFFGNNYKELSFSSINP-LDRG 137 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 + TG+RV+D F P+ GQR+G+F+G+G+GKSTLL M A++ D +I+ +GERG Sbjct: 138 VFTEQIVTGVRVLDGFLPVARGQRVGIFSGAGVGKSTLLGMIAKNSKADVNVIAFIGERG 197 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 RE+ EFI+ LG+ +SV++V+TSDESPI R TA +AE+F G +V+L+ DS Sbjct: 198 RELNEFIKYELGNGCFNRSVLIVSTSDESPISRYKGAYTATLVAEHFRDCGMDVMLLFDS 257 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 ITRFA++ REI+ + GE P +GYP SVF E+P LLER G + KG+IT +VLV+GD Sbjct: 258 ITRFANAKREISLSMGEPPATKGYPPSVFVEIPILLERSGLN--AKGSITGFYTVLVEGD 315 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + ++PI+D+++++LDGHI+L+R L+++G YP V+ L S SR + + +++KL+S + + Sbjct: 316 DFSEPISDNMKAVLDGHIILDRDLSDKGIYPSVNILNSTSRSLHRIVNFEKQKLISKIRN 375 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L+ ++ D+ G Y G + +D A+ + P I DFL Q Sbjct: 376 LLSIYKSYEDLIKTGIYVKGSNKEVDLAIAKYPKIIDFLSQ 416 >gi|148976416|ref|ZP_01813122.1| flagellum-specific ATP synthase [Vibrionales bacterium SWAT-3] gi|145964239|gb|EDK29495.1| flagellum-specific ATP synthase [Vibrionales bacterium SWAT-3] Length = 439 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 135/321 (42%), Positives = 203/321 (63%), Gaps = 8/321 (2%) Query: 103 GRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRVI+ +G P+DG + + S E ++ + R+ + + G++ I+ + Sbjct: 102 GRVIDGVGNPLDGLGPIYTEQRASFSAEPINP----LARKPISEPLDVGLKAINGLLTVG 157 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQRIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D K+SV Sbjct: 158 KGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSV 217 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D SP++R TA+T+AEYF +G +VLL++DS+TRFA + REIA + GE P Sbjct: 218 VVAAPADSSPLMRLKGCQTALTVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPA 277 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL Sbjct: 278 TKGYPPSVFAKLPALVERAGNGNDEQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVL 337 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R +A+ G YP +D SVSR + + + + ++ ++ + +D+ IG Y+PG Sbjct: 338 SREMADAGHYPAIDVEKSVSRAMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPG 397 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +D A P + ++L+Q Sbjct: 398 TDPAIDSAFTLKPKLDEYLQQ 418 >gi|322378954|ref|ZP_08053368.1| flagellum-specific ATP synthase [Helicobacter suis HS1] gi|321148630|gb|EFX43116.1| flagellum-specific ATP synthase [Helicobacter suis HS1] Length = 434 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 150/397 (37%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWC 102 LGD V V + + LG V+ + P E +GD V P Sbjct: 40 LGDMVQVERADGGECLGMVVVVEKTQFGFTPFSFVEGCKVGDRVLFVKEGLSFPVGQGLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG P+D + + +++ + P ++R +++ F G++ ID GQ Sbjct: 100 GRVLDPLGNPLDKLGFVRASGFAPVMLAPIKP-LDRAIIDEPFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFI L NL+ +V++VA Sbjct: 159 KMGIFAGSGVGKSTLMGMVVRGCSASIKVIALIGERGREIPEFIHKNLQGNLENTVLIVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD++P++RK A+++AEYF ++G +VL ++DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDAPLMRKYGAFCAMSVAEYFKNQGHDVLFMMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S + LP+L+ER G E+ KG+ITA +VLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALTLLPQLMERAG-KEQNKGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR++ + S D L +E + IG Y+ G D Sbjct: 338 TDHGIYPPINILHSASRVSKEVSSHDHMLAARKFRKLYALLKENEVLIRIGSYQRGFDPD 397 Query: 403 LDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438 LD+A+ + + FL Q + + S QE+ + +Q Sbjct: 398 LDEAMDKKAKMDAFLAQEEEEVVPSSQSIQELQEIMQ 434 >gi|292487989|ref|YP_003530866.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430] gi|292899209|ref|YP_003538578.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946] gi|291199057|emb|CBJ46168.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946] gi|291553413|emb|CBA20458.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430] gi|312172114|emb|CBX80371.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC BAA-2158] Length = 453 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 141/328 (42%), Positives = 198/328 (60%), Gaps = 2/328 (0%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+P+DG + G + I P + R + + TG+R I+ + G Sbjct: 116 LGRVLDGSGRPLDGLPAPETGYRAPLITPPFNP-LQRTPITEVLDTGVRAINALLTVGRG 174 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + ++VV+ Sbjct: 175 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARAVVI 234 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P + Sbjct: 235 AAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 294 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 295 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 354 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D AS+SR+ V L+ ++ RD+ +G Y G D Sbjct: 355 RLAESGHYPAIDIEASISRVMAHLIDETHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTD 414 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428 LDKA+ P + FL+Q + S+ D Sbjct: 415 PTLDKAIKLYPELEAFLQQGMFERSTFD 442 >gi|322379808|ref|ZP_08054105.1| flagellum-specific ATP synthase [Helicobacter suis HS5] gi|321147776|gb|EFX42379.1| flagellum-specific ATP synthase [Helicobacter suis HS5] Length = 436 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 150/397 (37%), Positives = 228/397 (57%), Gaps = 5/397 (1%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWC 102 LGD V V + + LG V+ + P E +GD V P Sbjct: 40 LGDMVQVERADGGECLGMVVVVEKTQFGFTPFSFVEGCKVGDRVLFVKEGLSFPVGQGLL 99 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG P+D + + +++ + P ++R +++ F G++ ID GQ Sbjct: 100 GRVLDPLGNPLDKLGFVRASGFAPVMLAPIKP-LDRAIIDEPFSVGVKSIDGLLTCGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFI L NL+ +V++VA Sbjct: 159 KMGIFAGSGVGKSTLMGMVVRGCSASIKVIALIGERGREIPEFIHKNLQGNLENTVLIVA 218 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 TSD++P++RK A+++AEYF ++G +VL ++DS+TRFA + REI GE P ++GY Sbjct: 219 TSDDAPLMRKYGAFCAMSVAEYFKNQGHDVLFMMDSVTRFAMAQREIGLALGEPPTSKGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S + LP+L+ER G E+ KG+ITA +VLV+GD+ +DPIAD RSILDGHIVL+R L Sbjct: 279 PPSALTLLPQLMERAG-KEQNKGSITAFFTVLVEGDDLSDPIADQSRSILDGHIVLSREL 337 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 + G YPP++ L S SR++ + S D L +E + IG Y+ G D Sbjct: 338 TDHGIYPPINILHSASRVSKEVSSHDHMLAARKFRKLYALLKENEVLIRIGSYQRGFDPD 397 Query: 403 LDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438 LD+A+ + + FL Q + + S QE+ + +Q Sbjct: 398 LDEAMDKKAKMDAFLAQEEEEVVPSSQSIQELQEIMQ 434 >gi|149908767|ref|ZP_01897428.1| Putative FliI, flagellum-specific ATP synthase [Moritella sp. PE36] gi|149808309|gb|EDM68248.1| Putative FliI, flagellum-specific ATP synthase [Moritella sp. PE36] Length = 444 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 147/376 (39%), Positives = 220/376 (58%), Gaps = 21/376 (5%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC---------WCGR 104 N +V+ N DI Y+ P L V + R+SP + GR Sbjct: 55 NNGSLAAEVVGFNRDISYLMP--------LQHAVGLFSGARVSPQSGIENIVVGEQLLGR 106 Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 V++ L +P+DG ++ + + + P ++RQ + + GIR I+ GQR+ Sbjct: 107 VVDGLLQPLDGLPAITGESIPLFSLPNNP--LSRQPISEPIDVGIRCINAVLTPGKGQRL 164 Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVAT 223 G+FAGSG+GKS LL M R + +I+ L+GERGREVREFIE LG+ K+++VV A Sbjct: 165 GLFAGSGVGKSVLLGMMTRYTEAEIIIVGLIGERGREVREFIEHSLGEEGRKRAIVVAAP 224 Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 +D + ++R A +AE+F +G +VLL++DS+TR+A + REI GE P +GYP Sbjct: 225 ADATALMRLRAAQVCHRLAEHFRDQGKHVLLLMDSLTRYAQAQREIGLAMGEPPATKGYP 284 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 SVFS L +L+ER G + G++TA+ +VLV+GDN +PIAD+ R+ILDGHIVL+R LA Sbjct: 285 PSVFSLLTQLVERAG-NGLGSGSMTAIYTVLVEGDNQQEPIADAARAILDGHIVLSRDLA 343 Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403 E+G YP +D AS+SR+ + D L L +++ R++ +GGY+PG D+ + Sbjct: 344 EQGHYPAIDISASISRVMPQVVKKDYLAHAIKLKKLYSSYQQIRELIPLGGYQPGKDMQV 403 Query: 404 DKAVHQVPIIYDFLKQ 419 D AV + P I FL+Q Sbjct: 404 DYAVQKFPAIAAFLQQ 419 >gi|229522083|ref|ZP_04411500.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TM 11079-80] gi|229341008|gb|EEO06013.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TM 11079-80] Length = 439 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 141/321 (43%), Positives = 206/321 (64%), Gaps = 6/321 (1%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI+ +G P+DG + + S+ M P + R+ + + GI+ I+ + G Sbjct: 102 GRVIDGVGNPLDGLGPIYTEQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QRIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVV 219 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P + Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGT 398 Query: 400 DLILDKAVHQVPIIYDFLKQS 420 D +D A P + +L+Q+ Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419 >gi|327394268|dbj|BAK11690.1| flagellum-specific ATP synthase FliI [Pantoea ananatis AJ13355] Length = 453 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 142/328 (43%), Positives = 195/328 (59%), Gaps = 6/328 (1%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHG 161 RV++ G+P+DG L + PP + R + TG+R I+ + G Sbjct: 118 RVLDGSGRPLDG---LPSPETGYRAALNTPPFNPLQRTPITDVLDTGVRAINALLTVGRG 174 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 175 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVI 234 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P + Sbjct: 235 AAPADVSPLLRLQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIALAIGEPPATK 294 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 295 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 354 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D AS+SR + V L+ F+ RD+ +G Y G D Sbjct: 355 RLAEAGHYPAIDIEASISRAMTSLIDENHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSD 414 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + S D Sbjct: 415 PMLDKAIQLYPQMEAFLQQGIFERSEYD 442 >gi|238755310|ref|ZP_04616653.1| Flagellum-specific ATP synthase [Yersinia ruckeri ATCC 29473] gi|238706446|gb|EEP98820.1| Flagellum-specific ATP synthase [Yersinia ruckeri ATCC 29473] Length = 454 Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 138/318 (43%), Positives = 195/318 (61%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + + V P + R +E+ G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPETGYRAPLMTPPVNP-LQRTAIEQVLDVGVRTINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+R Sbjct: 296 YPPSVFAKLPALVERAGNGVSGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLSRR 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + V L+ ++ RD+ +G Y G D Sbjct: 356 LAESGNYPAIDIEASISRAMTSLIDDNHYSKVRQFKQLLASYQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LD+A+ P + FL+Q Sbjct: 416 LLDRAILLYPQMETFLQQ 433 >gi|291617851|ref|YP_003520593.1| FliI [Pantoea ananatis LMG 20103] gi|291152881|gb|ADD77465.1| FliI [Pantoea ananatis LMG 20103] Length = 463 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 142/328 (43%), Positives = 195/328 (59%), Gaps = 6/328 (1%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHG 161 RV++ G+P+DG L + PP + R + TG+R I+ + G Sbjct: 128 RVLDGSGRPLDG---LPSPETGYRAALNTPPFNPLQRTPITDVLDTGVRAINALLTVGRG 184 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 185 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSVVI 244 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P + Sbjct: 245 AAPADVSPLLRLQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIALAIGEPPATK 304 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 305 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 364 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D AS+SR + V L+ F+ RD+ +G Y G D Sbjct: 365 RLAEAGHYPAIDIEASISRAMTSLIDENHYARVRQFKQLLSSFQRNRDLVSVGAYAAGSD 424 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + S D Sbjct: 425 PMLDKAIQLYPQMEAFLQQGIFERSEYD 452 >gi|261821170|ref|YP_003259276.1| flagellum-specific ATP synthase [Pectobacterium wasabiae WPP163] gi|261605183|gb|ACX87669.1| flagellar protein export ATPase FliI [Pectobacterium wasabiae WPP163] Length = 456 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 141/327 (43%), Positives = 196/327 (59%), Gaps = 2/327 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I P + R +E G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPDTGYRAPLITPPFNP-LQRTPIESVLDVGVRAINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G++TA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 296 YPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR V L+ ++ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTALIDEGHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +LDKA+ P + FL+Q + S+ D Sbjct: 416 MLDKAIRLYPHLEAFLQQGMFEQSNYD 442 >gi|46447031|ref|YP_008396.1| type III secretion system ATPase [Candidatus Protochlamydia amoebophila UWE25] gi|46400672|emb|CAF24121.1| probable type III secretion pathway protein sctN [Candidatus Protochlamydia amoebophila UWE25] Length = 454 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 158/390 (40%), Positives = 228/390 (58%), Gaps = 24/390 (6%) Query: 60 GQVIRINLDIVYICPVG----IG--EEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113 +V+ D V + P+G IG E+ L H ++ P GR++N LG+P+ Sbjct: 74 AEVVGFTKDEVLLSPLGEMTGIGPSSEVIPTHLPLH---IKVGPQ--LLGRILNGLGEPL 128 Query: 114 DGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 D + KG L +E ++ P + R + GIR ID GQR+G+FA Sbjct: 129 DEET---KGPLILEETYPVIQAPPDPVKRMPIHNPISVGIRAIDGVLTTGLGQRVGIFAA 185 Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESP 228 +G GKSTLL M AR+ D +ISL+GERGRE+REFIE LG + LK+SV+VV+TSD++ Sbjct: 186 AGGGKSTLLGMIARNAVADVNVISLIGERGRELREFIEKDLGPEGLKRSVLVVSTSDQAS 245 Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 LR A IAEYF +G +V+L++DS+TRFA ++RE+ +GE P GY SVFS Sbjct: 246 QLRLNAAYVGTAIAEYFRDQGKSVILMMDSVTRFARALREVGLAAGEPPARAGYTPSVFS 305 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 LP+LLER G S+K G+ITA ++LV GD+ N+P+AD VRSILDGHI+L+ LA + Y Sbjct: 306 TLPKLLERAGNSDK--GSITAFYTILVAGDDMNEPVADEVRSILDGHIILSSELARQYHY 363 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 P +D L+S SR+ + + +LV L ++ +++ + IG Y+ G D D A+ Sbjct: 364 PAIDVLSSASRVMNAIVPKEHLQLVGKLKEVLANYKKNELLIKIGEYKRGADKAGDFAID 423 Query: 409 QVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + + FLKQ + S FQE + L+ Sbjct: 424 YIEKVLKFLKQGVDEKCS---FQETVQLLK 450 >gi|74317621|ref|YP_315361.1| flagellar biosynthesis/type III secretory pathway ATPase FliI [Thiobacillus denitrificans ATCC 25259] gi|74057116|gb|AAZ97556.1| flagellar biosynthesis/type III secretory pathway ATPase FliI [Thiobacillus denitrificans ATCC 25259] Length = 468 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 202/322 (62%), Gaps = 2/322 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV+++ G+P+DG S+ + + ++ ++R + + G+R I+ + Sbjct: 127 VLLGRVLDSNGRPLDGLGSV-HTSATAPLNNRAANPLSRAPISEILDVGVRAINSMLTIG 185 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG+ L ++V Sbjct: 186 RGQRMGLFAGSGVGKSVLLGMMARYTSADVIVVGLIGERGREVKEFIEQILGEEGLARAV 245 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D P++R A IAE+F +G NVLLI+DS+TR+A + REIA GE P Sbjct: 246 VVAAPADTPPLMRLQGAAYATAIAEHFRDEGKNVLLIMDSLTRYAMAQREIALAIGEPPA 305 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G + G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 306 TKGYPPSVFAKLPALVERAGNGKPGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 365 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D S+SR SA +++ L L R+ +RD+ +G Y PG Sbjct: 366 SRDLAESGHYPAIDIEQSISRAMHGITSAAHQQMARRLKKLYSRYARSRDLINVGAYAPG 425 Query: 399 VDLILDKAVHQVPIIYDFLKQS 420 D +LD+A+ I FL+Q+ Sbjct: 426 TDPLLDEAIRLQEGIEAFLQQN 447 >gi|260767703|ref|ZP_05876638.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972] gi|260617212|gb|EEX42396.1| flagellum-specific ATP synthase FliI [Vibrio furnissii CIP 102972] gi|315179465|gb|ADT86379.1| flagellum-specific ATP synthase FliI [Vibrio furnissii NCTC 11218] Length = 440 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 140/323 (43%), Positives = 205/323 (63%), Gaps = 4/323 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASFNAQPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHVLMSKAVRQILSICRKNQDLVSIGAYKPGTD 399 Query: 401 LILDKAVHQVPIIYDFLKQSPSD 423 +D A P + ++L+Q D Sbjct: 400 QAIDSAFTLKPKLDNYLQQGMKD 422 >gi|312173318|emb|CBX81573.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC BAA-2158] Length = 454 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 134/319 (42%), Positives = 200/319 (62%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A G+P+DG + K + + P ++R ++ G+R I+ + GQ Sbjct: 115 GRVLDAQGRPLDGRPAPLKTSSASLFTQPINP-LHRDPIKSVLDVGVRAINGLLTVGRGQ 173 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + ++++VV+ Sbjct: 174 RMGLFAGSGVGKSVLLGMMARYTDADVIVVGLIGERGREVKDFIENILGAEGIERAVVIA 233 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR + A +AE F +G NVLLI+DS+TRFA + RE+A GE P +G Sbjct: 234 APADVSPVLRMQGAVYATRLAEDFRDRGMNVLLIMDSLTRFAMAQREVALAIGEPPATKG 293 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LP L+ER G G++TA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 294 YPPSVFARLPALVERAGNGVAGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 353 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + + + V S + ++ D+ +G Y G D Sbjct: 354 LAESGHYPAIDIEASISRAMTELIPHAQYRKVQSFKQQLSSYQRNSDLVSVGAYVSGSDA 413 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +LD+A+ + P + +L Q+ Sbjct: 414 LLDRAIARYPQMESYLHQA 432 >gi|218549266|ref|YP_002383057.1| flagellum-specific ATP synthase [Escherichia fergusonii ATCC 35469] gi|218356807|emb|CAQ89435.1| flagellum-specific ATP synthase [Escherichia fergusonii ATCC 35469] Length = 457 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 144/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 116 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 174 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 175 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 234 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 235 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 294 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 295 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 354 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 355 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 414 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + FL+Q Sbjct: 415 SDPMLDKAIALWPQLEGFLQQ 435 >gi|310767341|gb|ADP12291.1| flagellum-specific ATP synthase [Erwinia sp. Ejp617] Length = 453 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 141/328 (42%), Positives = 198/328 (60%), Gaps = 2/328 (0%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+P+DG + G + I P + R + + TG+R I+ + G Sbjct: 116 LGRVLDGSGRPLDGLPAPETGYRAPLITPPFNP-LQRTPITEVLDTGVRAINALLTVGRG 174 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + ++VV+ Sbjct: 175 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARAVVI 234 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P + Sbjct: 235 AAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 294 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 295 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 354 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D AS+SR+ V L+ ++ RD+ +G Y G D Sbjct: 355 RLAESGHYPAIDIEASISRVMAHLIDDTHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTD 414 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428 LDKA+ P + FL+Q + S+ D Sbjct: 415 PTLDKAIKLYPELEAFLQQGMFERSTFD 442 >gi|188534123|ref|YP_001907920.1| flagellum-specific ATP synthase [Erwinia tasmaniensis Et1/99] gi|188029165|emb|CAO97037.1| Flagellum-specific ATP synthase [Erwinia tasmaniensis Et1/99] Length = 452 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 142/328 (43%), Positives = 197/328 (60%), Gaps = 2/328 (0%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+P+DG + G + I P + R + TG+R I+ + G Sbjct: 115 LGRVLDGSGRPLDGLPAPETGYRAPLITPPFNP-LQRTPITDVLDTGVRAINALLTVGRG 173 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 174 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARSVVI 233 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P + Sbjct: 234 AAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 293 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 294 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 353 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D AS+SR+ V L+ ++ RD+ +G Y G D Sbjct: 354 RLAESGHYPAIDIEASISRVMAHLIDDTHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTD 413 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428 LDKA+ P + FL+Q + S+ D Sbjct: 414 PTLDKAIKLYPELEAFLQQGMFERSTFD 441 >gi|330963705|gb|EGH63965.1| type III secretion component [Pseudomonas syringae pv. actinidiae str. M302091] Length = 442 Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 162/425 (38%), Positives = 230/425 (54%), Gaps = 14/425 (3%) Query: 4 NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQ 61 +LE QLA+ G + SI V + V +G+ + + G + + Sbjct: 11 DLERRLQLAQPRPMR-----GTLRSIRGVLLRASVAG--VRIGELCLLRDPGNGRELSAE 63 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120 VI + D + P+G E +S + G+ + GRVI+ +G+ +DG + Sbjct: 64 VIGFDEDDAILSPIGSMEGLSTRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPIA 123 Query: 121 KGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 L + PPA +RQR+ K G+R ID L GQR+G+F G+GKS+LL+ Sbjct: 124 ALGLQRYPLHAEPPAPFSRQRIVKPLSLGVRAIDSLLTLAQGQRMGIFGEPGVGKSSLLA 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238 R+ D ++I L+GERGREVRE +E L + ++V VVATSD R A A Sbjct: 184 SIVRNSDADVIVIGLIGERGREVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 T+AEY +G NVLL++DS+TRFA + REI GE P RGYP S FS LPRLLER G Sbjct: 244 TTLAEYHRDQGRNVLLLMDSLTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P G+ITA+ +VL +GD DP+A+ RSILDGHIVL+ LA+ +P +D L S S Sbjct: 304 PGPS--GSITALYTVLTEGDATTDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RL D + + K+L S L LI R +E + +G Y G D + D+A+ + I FL+ Sbjct: 362 RLMDHVATPEHKRLASRLRELIARRQEIELLIQVGEYAAGSDPLADEAIIRHSAIEAFLR 421 Query: 419 QSPSD 423 Q ++ Sbjct: 422 QPAAE 426 >gi|324114216|gb|EGC08189.1| ATPase FliI/YscN family protein [Escherichia fergusonii B253] gi|325497683|gb|EGC95542.1| flagellum-specific ATP synthase [Escherichia fergusonii ECD227] Length = 456 Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 144/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + FL+Q Sbjct: 414 SDPMLDKAIALWPQLEGFLQQ 434 >gi|320198631|gb|EFW73231.1| Flagellum-specific ATP synthase FliI [Escherichia coli EC4100B] Length = 457 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 145/324 (44%), Positives = 198/324 (61%), Gaps = 8/324 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFT 156 GRV++ GKP+DG S +ME + + P N R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPSPD----TMETGALITPPFNPLQRTPIEHVLDTGVRPINALL 170 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 171 TVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRA 230 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE Sbjct: 231 RSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGE 290 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH Sbjct: 291 PPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGH 350 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y Sbjct: 351 IVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAY 410 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G D +LDKA+ P + +L+Q Sbjct: 411 AKGSDPMLDKAIALWPQLEGYLQQ 434 >gi|261252325|ref|ZP_05944898.1| flagellum-specific ATP synthase FliI [Vibrio orientalis CIP 102891] gi|260935716|gb|EEX91705.1| flagellum-specific ATP synthase FliI [Vibrio orientalis CIP 102891] Length = 440 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 138/336 (41%), Positives = 208/336 (61%), Gaps = 2/336 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG L + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPLYTEKRASFNAEPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G ++G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R Sbjct: 281 YPPSVFAKLPALVERAGNGSPDQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + S + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITSEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 +D A P + +L+Q+ + D+ + +L Sbjct: 401 AIDGAFTIKPKLDAYLQQTMKETVPYDMCVNMLSRL 436 >gi|262404476|ref|ZP_06081031.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC586] gi|262349508|gb|EEY98646.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC586] Length = 439 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 205/320 (64%), Gaps = 4/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG L + + + P + R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPLYTDQRASFNAAPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTD 399 Query: 401 LILDKAVHQVPIIYDFLKQS 420 +D A P + +L+Q+ Sbjct: 400 KAIDAAFTLKPKLDQYLQQA 419 >gi|86157817|ref|YP_464602.1| ATPase FliI/YscN [Anaeromyxobacter dehalogenans 2CP-C] gi|85774328|gb|ABC81165.1| type III secretion system ATPase, FliI/YscN [Anaeromyxobacter dehalogenans 2CP-C] Length = 452 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 144/336 (42%), Positives = 207/336 (61%), Gaps = 13/336 (3%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSM-----EIMSKVPPAMNRQRVEKGFKTG 148 RI GRV++A +P+DG G + + + + PPA++R+RVE+ G Sbjct: 93 RIPVDEALLGRVVDASLRPVDG------GPVPILRQRTALHAAPPPALSRRRVERPVPLG 146 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208 IR +D + GQR+ V AG G+GKS LL M ARS D V++ LVGERGREVREF+E Sbjct: 147 IRAVDACLTVGEGQRVAVMAGPGVGKSVLLGMLARSATADVVVVGLVGERGREVREFVER 206 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG L ++VVVVATSD SP+ R A + A +AE+F +G VLL++DS++R A + RE Sbjct: 207 DLGPGLARAVVVVATSDASPLERLRAAMAATAVAEWFRGRGRRVLLLVDSLSRVAQAQRE 266 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH-NDPIADS 327 I +GE P RGYP S F+ LPRL+ER G ++ G+ITA +VL +GD+H DPIAD+ Sbjct: 267 IGLAAGEPPTTRGYPPSAFAILPRLVERAG-NDAGPGSITAFYTVLAEGDDHAGDPIADA 325 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387 R+ LDGH+VL+R LAE G +P +D LASVSR+ + + + L ++ E Sbjct: 326 ARATLDGHLVLSRRLAESGHFPAIDVLASVSRVMNDIVPPEHRALAREAREVLSAHREAA 385 Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 D+ +G Y G + +D+A+ + + FL+Q P++ Sbjct: 386 DLVEVGAYAAGSNPRVDRALRCIEPLRAFLRQDPAE 421 >gi|134294012|ref|YP_001117748.1| FliI/YscN family ATPase [Burkholderia vietnamiensis G4] gi|134137169|gb|ABO58283.1| ATPase, FliI/YscN family [Burkholderia vietnamiensis G4] Length = 465 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 160/382 (41%), Positives = 223/382 (58%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRI-SPSACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + + GRV++ LG+P+D D Sbjct: 83 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFAVGDALFGRVLDGLGRPLD-DL 141 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 142 GPVTGAAWVSTQQDPPNPLARKLIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 201 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 202 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 261 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 262 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 321 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + +G+ITA+ +VLV+GD +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 322 AG--QGARGSITALYTVLVEGDEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 379 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S ++ + + LI +++E + IG YR G D + D A+ I F Sbjct: 380 LSRVMPLVASRAHQQAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 439 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q+ S EDV F + KL Sbjct: 440 CAQA----SHEDVRFDALLAKL 457 >gi|241761173|ref|ZP_04759262.1| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|283856297|ref|YP_162372.2| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis ZM4] gi|241374792|gb|EER64253.1| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|283775293|gb|AAV89261.2| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis ZM4] Length = 443 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 137/325 (42%), Positives = 202/325 (62%), Gaps = 6/325 (1%) Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRVI ALG+P+D +LG D ++ K+ +NR RV + F G+R I+ Sbjct: 105 LGRVIGALGEPLD---NLGPIITDEYWPLVGKMGNPLNRGRVTQPFDMGVRAINALLTAG 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218 GQRI + AGSG+GKS L+ D ++ L+GER REV +F+E + D+++ KSV Sbjct: 162 VGQRIAIMAGSGVGKSVLMGQMIAGAKADVIVTGLIGERSREVTDFVETKISDDVRPKSV 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV +D P+LR A + A IAEYF +KG NVLL++DS+TR AH+ RE+ + GE P Sbjct: 222 VVAVPADHPPVLRLRAAMRATAIAEYFRAKGKNVLLLIDSLTRIAHAQREVGLSLGEPPT 281 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP S +PRL+ER G KG ITA+ +VL DGD+ +DPI D+ R+I+DGHI+L Sbjct: 282 IKGYPPSALGLIPRLVERAGIDIHSKGAITAIYTVLADGDDPDDPIVDTARAIVDGHIIL 341 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +RSLAE+G +P +D S+SR+ S ++ + L L +EE RD+ L+G YR G Sbjct: 342 SRSLAEQGVFPAIDLGKSLSRVMSDIISPGHRQAAAHLRRLWSVYEENRDLILMGAYRSG 401 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSD 423 D +D+A+++ + DF++Q ++ Sbjct: 402 TDASIDEAINRHNDVLDFIRQGQNE 426 >gi|259908761|ref|YP_002649117.1| flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96] gi|224964383|emb|CAX55892.1| Flagellum-specific ATP synthase [Erwinia pyrifoliae Ep1/96] gi|283478737|emb|CAY74653.1| flagellum-specific ATP synthase [Erwinia pyrifoliae DSM 12163] Length = 453 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 141/328 (42%), Positives = 198/328 (60%), Gaps = 2/328 (0%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+P+DG + G + I P + R + + TG+R I+ + G Sbjct: 116 LGRVLDGSGRPLDGLPAPETGYRAPLITPPFNP-LQRTPITEVLDTGVRAINALLTVGRG 174 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + ++VV+ Sbjct: 175 QRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGSEGRARAVVI 234 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P + Sbjct: 235 AAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATK 294 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 295 GYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSR 354 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D AS+SR+ V L+ ++ RD+ +G Y G D Sbjct: 355 RLAESGHYPAIDIEASISRVMAHLIDDTHYARVRQFKQLLSSYQRNRDLVSVGAYAAGTD 414 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSED 428 LDKA+ P + FL+Q + S+ D Sbjct: 415 PTLDKAIKLYPELEAFLQQGMFERSTFD 442 >gi|213421618|ref|ZP_03354684.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 319 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 148/320 (46%), Positives = 199/320 (62%), Gaps = 11/320 (3%) Query: 103 GRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRVI+ G+P+DG D K +M PPAM RQ + + TGIR ID Sbjct: 7 GRVIDGFGRPLDGCELPDVCWKDYDAMP-----PPAMVRQPITQPLMTGIRAIDSVATCG 61 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK-SV 218 GQR+G+F+ G+GKSTLL+M + D ++ L+GERGREVREFI+ L + +K V Sbjct: 62 EGQRVGIFSAPGVGKSTLLAMLCNAPDADCNVLVLIGERGREVREFIDFTLSEETRKRCV 121 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +VVATSD + R A A TIAE+F G V+L+ DS+TR+A + REIA +GE V Sbjct: 122 IVVATSDRPALERVRALFVATTIAEFFRDNGKRVVLLADSLTRYARAAREIALAAGETAV 181 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 + YP VFS LPRLLER G EK G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL Sbjct: 182 SGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPLADEVRSLLDGHIVL 239 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D LA++SR+ S + ++L + L + ++E + IG Y+ G Sbjct: 240 SRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQEVELLIRIGEYQRG 299 Query: 399 VDLILDKAVHQVPIIYDFLK 418 VD DKA+ P I FL+ Sbjct: 300 VDTDTDKAIDTYPDICTFLR 319 >gi|260752865|ref|YP_003225758.1| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552228|gb|ACV75174.1| ATPase, FliI/YscN family [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 443 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 137/325 (42%), Positives = 202/325 (62%), Gaps = 6/325 (1%) Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRVI ALG+P+D +LG D ++ K+ +NR RV + F G+R I+ Sbjct: 105 LGRVIGALGEPLD---NLGPIITDEYWPLVGKMGNPLNRGRVTQPFDMGVRAINALLTAG 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218 GQRI + AGSG+GKS L+ D ++ L+GER REV +F+E + D+++ KSV Sbjct: 162 VGQRIAIMAGSGVGKSVLMGQMIAGAKADVIVTGLIGERSREVTDFVETKISDDVRPKSV 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV +D P+LR A + A IAEYF +KG NVLL++DS+TR AH+ RE+ + GE P Sbjct: 222 VVAVPADHPPVLRLRAAMRATAIAEYFRAKGKNVLLLIDSLTRIAHAQREVGLSLGEPPT 281 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP S +PRL+ER G KG ITA+ +VL DGD+ +DPI D+ R+I+DGHI+L Sbjct: 282 IKGYPPSALGLIPRLVERAGIDIHSKGAITAIYTVLADGDDPDDPIVDTARAIVDGHIIL 341 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +RSLAE+G +P +D S+SR+ S ++ + L L +EE RD+ L+G YR G Sbjct: 342 SRSLAEQGVFPAIDLGKSLSRVMSDIISPGHRQAAAHLRRLWSVYEENRDLILMGAYRSG 401 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSD 423 D +D+A+++ + DF++Q ++ Sbjct: 402 TDASIDEAINRHNDVLDFIRQGQNE 426 >gi|292489159|ref|YP_003532046.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430] gi|292900277|ref|YP_003539646.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946] gi|291200125|emb|CBJ47251.1| flagellum-specific ATP synthase [Erwinia amylovora ATCC 49946] gi|291554593|emb|CBA22232.1| flagellum-specific ATP synthase [Erwinia amylovora CFBP1430] Length = 454 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 134/319 (42%), Positives = 200/319 (62%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A G+P+DG + K + + P ++R ++ G+R I+ + GQ Sbjct: 115 GRVLDAQGRPLDGRPAPLKTSSASLFTQPINP-LHRDPIKSVLDVGVRAINGLLTVGRGQ 173 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + ++++VV+ Sbjct: 174 RMGLFAGSGVGKSVLLGMMARYTDADVIVVGLIGERGREVKDFIENILGAEGIERAVVIA 233 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR + A +AE F +G NVLLI+DS+TRFA + RE+A GE P +G Sbjct: 234 APADVSPVLRMQGAVYATRLAEDFRDRGMNVLLIMDSLTRFAMAQREVALAIGEPPATKG 293 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LP L+ER G G++TA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 294 YPPSVFARLPALVERAGNGVAGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 353 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + + + V S + ++ D+ +G Y G D Sbjct: 354 LAESGHYPAIDIEASISRAMTELIPHAQYRNVQSFKQQLSSYQRNSDLVSVGAYVSGSDA 413 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +LD+A+ + P + +L Q+ Sbjct: 414 LLDRAIARYPQMESYLHQA 432 >gi|28899020|ref|NP_798625.1| flagellum-specific ATP synthase [Vibrio parahaemolyticus RIMD 2210633] gi|153837002|ref|ZP_01989669.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus AQ3810] gi|260365234|ref|ZP_05777791.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus K5030] gi|260878784|ref|ZP_05891139.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus AN-5034] gi|260897379|ref|ZP_05905875.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus Peru-466] gi|260899938|ref|ZP_05908333.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus AQ4037] gi|4322012|gb|AAD15915.1| polar flagellum-specific ATP synthase FliI [Vibrio parahaemolyticus] gi|28807239|dbj|BAC60509.1| polar flagellum-specific ATP synthase FliI [Vibrio parahaemolyticus RIMD 2210633] gi|149749775|gb|EDM60520.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus AQ3810] gi|308088286|gb|EFO37981.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus Peru-466] gi|308094233|gb|EFO43928.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus AN-5034] gi|308107351|gb|EFO44891.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus AQ4037] gi|308115396|gb|EFO52936.1| flagellar protein export ATPase FliI [Vibrio parahaemolyticus K5030] gi|328474443|gb|EGF45248.1| flagellum-specific ATP synthase [Vibrio parahaemolyticus 10329] Length = 439 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 135/318 (42%), Positives = 202/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTEHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGSPEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A P + ++L+Q Sbjct: 401 AIDGAFTLKPKLDEYLQQ 418 >gi|284007028|emb|CBA72303.1| type III secretion cytoplasmic ATP synthase (YscN,SpaL,MxiB,HrcN,EscN) [Arsenophonus nasoniae] Length = 457 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 146/325 (44%), Positives = 204/325 (62%), Gaps = 6/325 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G +++ LG+P++ G+ + + P + RQ + + TGI+ ID L GQ Sbjct: 126 GGIVDGLGRPLEKMPIAGEWRSNH---NAAPDPLTRQLISEVLPTGIKAIDGILTLGVGQ 182 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221 RIG+FA +G GKSTLL M AR D V+++LVGERGREVREF++++L KK+++VV Sbjct: 183 RIGIFAAAGGGKSTLLGMLARGCEADVVVLALVGERGREVREFLDNHLPATARKKTILVV 242 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD P+ R A LTA TIAEYF +G VLL++DS+TRFA + REI +GE PVA G Sbjct: 243 ATSDRPPLERMKASLTATTIAEYFRDQGKQVLLLVDSLTRFARAAREIGLAAGEPPVANG 302 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF + LLER GP+ + G+I+A+ +VLV+GDN N+P+AD VRSILDGHIVL+R Sbjct: 303 FPPSVFVHMAALLERAGPA--KVGSISAIYTVLVEGDNMNEPVADEVRSILDGHIVLSRQ 360 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA G +P +D ASVSR+ D S L L F++ + + +G Y+ G D Sbjct: 361 LAAAGHFPAIDVNASVSRVMDNIVSKTHSLHARRLRQLRALFQDVQLLIRVGEYQSGQDK 420 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS 426 D+A+ + I FL+Q + S Sbjct: 421 DTDEAIEKNHPINQFLRQDSDEWVS 445 >gi|258621107|ref|ZP_05716141.1| flagellum-specific ATP synthase [Vibrio mimicus VM573] gi|262166233|ref|ZP_06033970.1| flagellum-specific ATP synthase FliI [Vibrio mimicus VM223] gi|262170883|ref|ZP_06038561.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451] gi|258586495|gb|EEW11210.1| flagellum-specific ATP synthase [Vibrio mimicus VM573] gi|261891959|gb|EEY37945.1| flagellum-specific ATP synthase FliI [Vibrio mimicus MB-451] gi|262025949|gb|EEY44617.1| flagellum-specific ATP synthase FliI [Vibrio mimicus VM223] Length = 439 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 205/320 (64%), Gaps = 4/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAAPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTD 399 Query: 401 LILDKAVHQVPIIYDFLKQS 420 +D A P + +L+Q+ Sbjct: 400 KAIDAAFTLKPKLDQYLQQA 419 >gi|237705900|ref|ZP_04536381.1| flagellum-specific ATP synthase [Escherichia sp. 3_2_53FAA] gi|226900657|gb|EEH86916.1| flagellum-specific ATP synthase [Escherichia sp. 3_2_53FAA] Length = 471 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 129 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 187 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 188 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 247 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 248 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 307 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 308 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 367 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 368 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 427 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 428 SDPMLDKAIALWPQLESYLQQ 448 >gi|293415251|ref|ZP_06657894.1| flagellar protein export ATPase FliI [Escherichia coli B185] gi|291432899|gb|EFF05878.1| flagellar protein export ATPase FliI [Escherichia coli B185] Length = 471 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 129 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINTLLTVG 187 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 188 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 247 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 248 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 307 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 308 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 367 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 368 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 427 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 428 SDPMLDKAIALWPQLEGYLQQ 448 >gi|153803032|ref|ZP_01957618.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-3] gi|153825622|ref|ZP_01978289.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-2] gi|124121430|gb|EAY40173.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-3] gi|149740773|gb|EDM54872.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MZO-2] gi|327484659|gb|AEA79066.1| Flagellum-specific ATP synthase FliI [Vibrio cholerae LMA3894-4] Length = 439 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 141/321 (43%), Positives = 205/321 (63%), Gaps = 6/321 (1%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI+ +G P+DG + S+ M P + R+ + + GI+ I+ + G Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QRIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVV 219 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P + Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGT 398 Query: 400 DLILDKAVHQVPIIYDFLKQS 420 D +D A P + +L+Q+ Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419 >gi|296103636|ref|YP_003613782.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058095|gb|ADF62833.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 454 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 151/375 (40%), Positives = 224/375 (59%), Gaps = 10/375 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF------HWGRFRISPSACWCGRVINALGKPID 114 +V+ N +++ P+ + I G ++ H G+ ++ GRV++A G+P+D Sbjct: 68 EVVGFNGQTLFLMPLEHVDGILPGARIYALQSDSHAGK-QLPVGPHLLGRVLDAQGRPLD 126 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 G + GK + + P ++R ++ G+R I+ + GQR+G+FAGSG+GK Sbjct: 127 GRPAPGKPAAGLFTPTLNP--LHRDPIKNVLDVGVRAINGLLTVGRGQRMGLFAGSGVGK 184 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233 S LL M AR D +++ L+GERGREV++FIE+ LG+ L ++VVV A +D SPILR Sbjct: 185 SVLLGMMARFTTADVIVVGLIGERGREVKDFIENILGEQGLARAVVVAAPADVSPILRMQ 244 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 + A IAE F +G NVLLI+DS+TR+A + RE+A GE P +GYP SVF+ LP L Sbjct: 245 GAVYATRIAEDFRERGLNVLLIMDSLTRYAMAQREVALAIGEPPATKGYPPSVFARLPAL 304 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 +ER G K G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R LAE G YP +D Sbjct: 305 VERTGNGVKGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDI 364 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 AS+SR + + + V L+ ++ RD+ +G Y G D +LD+A+ + P + Sbjct: 365 EASISRAMTELIPHAQYRKVQRFKQLLSAYQRNRDLVSVGAYVKGSDAMLDQAIDKYPSL 424 Query: 414 YDFLKQSPSDLSSED 428 FL Q+ + S D Sbjct: 425 EAFLHQAIHERSGYD 439 >gi|229513781|ref|ZP_04403243.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TMA 21] gi|229348962|gb|EEO13919.1| flagellum-specific ATP synthase FliI [Vibrio cholerae TMA 21] Length = 439 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 141/321 (43%), Positives = 205/321 (63%), Gaps = 6/321 (1%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI+ +G P+DG + S+ M P + R+ + + GI+ I+ + G Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QRIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVV 219 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P + Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGT 398 Query: 400 DLILDKAVHQVPIIYDFLKQS 420 D +D A P + +L+Q+ Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419 >gi|227112538|ref|ZP_03826194.1| flagellum-specific ATP synthase [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|227328355|ref|ZP_03832379.1| flagellum-specific ATP synthase [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 456 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 139/318 (43%), Positives = 192/318 (60%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I P + R +E G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPDTGYRAPLITPPFNP-LQRTPIESVLDVGVRAINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G++TA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 296 YPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR V L+ ++ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTALIDEGHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LDKA+ P + FL+Q Sbjct: 416 MLDKAIRLYPHLEAFLQQ 433 >gi|294084398|ref|YP_003551156.1| ATPase [Candidatus Puniceispirillum marinum IMCC1322] gi|292663971|gb|ADE39072.1| ATPase, FliI/YscN family [Candidatus Puniceispirillum marinum IMCC1322] Length = 442 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 139/318 (43%), Positives = 195/318 (61%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV +ALG P+D + L + +M K + R+ V+K G+R+I+ + GQ Sbjct: 104 GRVTDALGVPLD-NRPLPPLEGQWPLMGKELNPLQRKPVDKPLDVGVRIINSVLSVGQGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 R+G+ AGSG+GKS LL M +R D V++ ++GERGREV F+ LG + VVA Sbjct: 163 RVGIIAGSGVGKSVLLGMMSRFTDADIVVVGMIGERGREVGSFVNYILGSESRDRAAVVA 222 Query: 223 T-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +D SP+LR A IAEYF KG NVLLI+DS+TR AH+ REI GE P ++G Sbjct: 223 VPADRSPLLRIRGAERATAIAEYFRDKGKNVLLIMDSLTRVAHARREIGLALGEQPTSKG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SV S +PRL+ER G + +G+ITA+ +VL DGD+ NDP+ D+ R+ILDGHI+L+R Sbjct: 283 YPPSVVSMIPRLIERSGTGVEGQGSITAIYTVLADGDDANDPVVDTARAILDGHILLSRQ 342 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 A+ G YP +D SVSR+ + AD++ + L+ + E RD+ L+GGY PG D Sbjct: 343 QAQMGIYPAIDVTTSVSRVMNDITDADQQASAARFRRLVSLYMENRDLILMGGYTPGQDP 402 Query: 402 ILDKAVHQVPIIYDFLKQ 419 LD AV P + ++Q Sbjct: 403 DLDLAVELWPTLTKHIQQ 420 >gi|156933439|ref|YP_001437355.1| flagellum-specific ATP synthase [Cronobacter sakazakii ATCC BAA-894] gi|156531693|gb|ABU76519.1| hypothetical protein ESA_01257 [Cronobacter sakazakii ATCC BAA-894] Length = 456 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 147/336 (43%), Positives = 202/336 (60%), Gaps = 7/336 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG L D PP + R +E G+R I+ + Sbjct: 117 LGRVLDGAGKPLDG---LPSPDTETTGALITPPFNPLQRTAIEDVLDVGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR+ S + V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRVMTAIISEEHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 D +LD+A+ P + FL+Q + S ED Q + Sbjct: 414 SDPMLDRAITLWPQLEAFLQQGIYERSGVEDALQAL 449 >gi|27365283|ref|NP_760811.1| flagellum-specific ATP synthase [Vibrio vulnificus CMCP6] gi|320155667|ref|YP_004188046.1| flagellum-specific ATP synthase FliI [Vibrio vulnificus MO6-24/O] gi|27361430|gb|AAO10338.1| flagellar protein export ATPase FliI [Vibrio vulnificus CMCP6] gi|319930979|gb|ADV85843.1| flagellum-specific ATP synthase FliI [Vibrio vulnificus MO6-24/O] Length = 441 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 135/318 (42%), Positives = 202/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + G++ I+ + GQ Sbjct: 103 GRVIDGVGNPLDGLGPIYTEHRASFNAEPINP-LARKPITEPLDVGLKAINGLLTVGKGQ 161 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D K+SVVV Sbjct: 162 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVA 221 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 222 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 281 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G ++G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 282 YPPSVFAKLPALVERAGNGGPQQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 341 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + + ++ ++ + +D+ IG Y+PG D Sbjct: 342 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 401 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A P + ++L+Q Sbjct: 402 AIDSAFTLKPKLDEYLQQ 419 >gi|297582028|ref|ZP_06943947.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC385] gi|297533723|gb|EFH72565.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC385] Length = 439 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 141/321 (43%), Positives = 205/321 (63%), Gaps = 6/321 (1%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI+ +G P+DG + S+ M P + R+ + + GI+ I+ + G Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QRIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVV 219 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P + Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGT 398 Query: 400 DLILDKAVHQVPIIYDFLKQS 420 D +D A P + +L+Q+ Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419 >gi|163801848|ref|ZP_02195745.1| flagellum-specific ATP synthase [Vibrio sp. AND4] gi|159174356|gb|EDP59160.1| flagellum-specific ATP synthase [Vibrio sp. AND4] Length = 439 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 135/318 (42%), Positives = 202/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG L + + P + R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPLYTEHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+T+AEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASPLMRLKGCQTALTVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGGEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A P + ++L+Q Sbjct: 401 AIDSAFTLKPKLDEYLQQ 418 >gi|91211159|ref|YP_541145.1| flagellum-specific ATP synthase [Escherichia coli UTI89] gi|117624081|ref|YP_852994.1| flagellum-specific ATP synthase [Escherichia coli APEC O1] gi|218558798|ref|YP_002391711.1| flagellum-specific ATP synthase [Escherichia coli S88] gi|91072733|gb|ABE07614.1| flagellum-specific ATP synthase [Escherichia coli UTI89] gi|115513205|gb|ABJ01280.1| flagellum-specific ATP synthase [Escherichia coli APEC O1] gi|218365567|emb|CAR03294.1| flagellum-specific ATP synthase [Escherichia coli S88] gi|294493096|gb|ADE91852.1| flagellar protein export ATPase FliI [Escherichia coli IHE3034] gi|307626583|gb|ADN70887.1| flagellum-specific ATP synthase [Escherichia coli UM146] gi|315286663|gb|EFU46096.1| flagellar protein export ATPase FliI [Escherichia coli MS 110-3] gi|323186817|gb|EFZ72137.1| flagellar protein export ATPase FliI [Escherichia coli RN587/1] gi|323952434|gb|EGB48307.1| ATPase FliI/YscN family protein [Escherichia coli H252] gi|323956337|gb|EGB52080.1| ATPase FliI/YscN family protein [Escherichia coli H263] Length = 457 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLESYLQQ 434 >gi|212709509|ref|ZP_03317637.1| hypothetical protein PROVALCAL_00551 [Providencia alcalifaciens DSM 30120] gi|212687847|gb|EEB47375.1| hypothetical protein PROVALCAL_00551 [Providencia alcalifaciens DSM 30120] Length = 454 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 143/318 (44%), Positives = 199/318 (62%), Gaps = 3/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A G P+DG L + I + P + R + G+R I+ + GQ Sbjct: 117 GRVLDAQGTPLDGKGPLETKQRAPLITPSINP-LERTPIHDILDVGVRAINSLLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D L+++VVV Sbjct: 176 RMGLFAGSGVGKSVLLGMMARFTQADIIVVGLIGERGREVKDFIENILGADGLRRAVVVA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAEYF +G +VLLI+DS+TR++ + REIA GE P +G Sbjct: 236 APADVSPLLRMQGASYATRIAEYFRDQGKSVLLIMDSLTRYSMAQREIALAVGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G + K G+ITA +VL +GD+ DPIADS R+ILDGHIVL+RS Sbjct: 296 YPPSVFAKLPALVERAG-NGKNGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRS 354 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + D + + L ++ RD+ +G Y G D Sbjct: 355 LAESGHYPAIDIEASISRAMTELIEKDHYRKIQRFKQLTSSYQRNRDLINVGAYAMGSDP 414 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LD A+ P + FL+Q Sbjct: 415 MLDTAIQYYPRMSKFLQQ 432 >gi|330876197|gb|EGH10346.1| type III secretion component [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 442 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 162/425 (38%), Positives = 230/425 (54%), Gaps = 14/425 (3%) Query: 4 NLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQ--GKNSDNLGQ 61 +LE QLA+ G + SI V + V +G+ + + G + + Sbjct: 11 DLERRLQLAQPRPMR-----GTLRSIRGVLLRASVAG--VRIGELCLLRDPGNGRELSAE 63 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG 120 VI + D + P+G E +S + G+ + GRVI+ +G+ +DG + Sbjct: 64 VIGFDEDDAILSPIGSMEGLSTRTQIIATGQALGVQVGDALLGRVISPMGEFLDGPAPIA 123 Query: 121 KGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 L + PPA +RQR+ K G+R ID L GQR+G+F G+GKS+LL+ Sbjct: 124 ALGLQRYPLHAEPPAPFSRQRIVKPLSLGVRAIDSLLTLAQGQRMGIFGEPGVGKSSLLA 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238 R+ D ++I L+GERGREVRE +E L + ++V VVATSD R A A Sbjct: 184 SIVRNSDADVIVIGLIGERGREVRELLEGQLDATARARTVAVVATSDRPAAERVRAAYVA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 T+AEY +G NVLL++DS+TRFA + REI GE P RGYP S FS LPRLLER G Sbjct: 244 TTLAEYHRDQGRNVLLLMDSLTRFARAQREIGLAVGEPPTRRGYPPSFFSALPRLLERAG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P G+ITA+ +VL +GD DP+A+ RSILDGHIVL+ LA+ +P +D L S S Sbjct: 304 PGPS--GSITALYTVLTEGDATTDPVAEETRSILDGHIVLSAELAQRDHFPAIDVLRSRS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RL D + + K+L S L LI R +E + +G Y G D + D+A+ + I FL+ Sbjct: 362 RLMDHVATPEHKRLASRLRDLIARRQEIELLIQVGEYAAGSDPLADEAIIRHSAIEAFLR 421 Query: 419 QSPSD 423 Q ++ Sbjct: 422 QPAAE 426 >gi|25008474|sp|Q8KA42|FLII_BUCAP RecName: Full=Flagellum-specific ATP synthase gi|21622966|gb|AAM67640.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 466 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 146/335 (43%), Positives = 208/335 (62%), Gaps = 4/335 (1%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 +I S GRV+++ G+P+DG L + + S V +NR+ + + TGIR I+ Sbjct: 121 KIPLSTELLGRVLDSKGRPLDGRSQLNPKFFTF-LKSNVVNPLNRKPITEVLDTGIRAIN 179 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 + GQRIG+F+ SG+GKS LL M A+ D VII L+GERGREV++FIE+ LG N Sbjct: 180 ALITVGRGQRIGIFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSN 239 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVV+ A +D SP+L+ A A +IAEYF K +VLLI+DS+TR+A + R ++ + Sbjct: 240 GLSRSVVIAAPADVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLS 299 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHNDPIADSVRSI 331 GELPV++GYP+SVFS++P L+ER G ++ G+IT+ +VL + ++ DPIA RSI Sbjct: 300 LGELPVSKGYPSSVFSKIPILVERTGNTD-NYGSITSFYTVLTESEEDPQDPIAHICRSI 358 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHIVL+R AE G YP +D S+SR+ S + LI ++ RD+ Sbjct: 359 LDGHIVLSRHYAELGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQRNRDLIN 418 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 IG Y G D LD A+ PI+ FL+Q S+ SS Sbjct: 419 IGAYLKGTDSTLDHAIKIWPILERFLQQKQSEKSS 453 >gi|300940396|ref|ZP_07154981.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1] gi|300454790|gb|EFK18283.1| flagellar protein export ATPase FliI [Escherichia coli MS 21-1] Length = 457 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLESYLQQ 434 >gi|89899364|ref|YP_521835.1| ATPase FliI/YscN [Rhodoferax ferrireducens T118] gi|89344101|gb|ABD68304.1| ATPase FliI/YscN [Rhodoferax ferrireducens T118] Length = 471 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 144/342 (42%), Positives = 204/342 (59%), Gaps = 4/342 (1%) Query: 90 WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTG 148 + R+ GRV++A G P+D + D++ + + P AM+R V + TG Sbjct: 116 YATLRLPLGDGLLGRVVDAQGAPMDRRGPIE--DVTAVPLDRQPINAMDRAPVRETLDTG 173 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208 +R I+ + GQRIG+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIED Sbjct: 174 VRAINALLTIGRGQRIGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKEFIED 233 Query: 209 YLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 LGD+ + +SVVV A D P+LR A IAE F KG +VLL++DS+TR+A + R Sbjct: 234 ILGDDGRARSVVVAAPGDAPPLLRMQGAAYATAIAESFRDKGKHVLLLMDSLTRYAMAQR 293 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EIA GE P +GYP S F++LP+L+ER G G+ITA +VL +GD+ DPIAD+ Sbjct: 294 EIALAIGEPPATKGYPPSCFAKLPQLVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADA 353 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387 R+ILDGHIVL+R+LAE G +P +D S SR+ ++ + R+E+ R Sbjct: 354 ARAILDGHIVLSRALAESGHFPAIDIEQSASRVMHNVVPQQHFEMARRFRAINSRYEKGR 413 Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 D+ IG Y G D LD+A+ + FL+Q + S+ D Sbjct: 414 DLVQIGAYVGGSDPALDEAIQLHDDMARFLQQDMLEASTLDA 455 >gi|30410813|ref|NP_660429.2| flagellum-specific ATP synthase [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 455 Score = 256 bits (655), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 146/335 (43%), Positives = 208/335 (62%), Gaps = 4/335 (1%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 +I S GRV+++ G+P+DG L + + S V +NR+ + + TGIR I+ Sbjct: 110 KIPLSTELLGRVLDSKGRPLDGRSQLNPKFFTF-LKSNVVNPLNRKPITEVLDTGIRAIN 168 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 + GQRIG+F+ SG+GKS LL M A+ D VII L+GERGREV++FIE+ LG N Sbjct: 169 ALITVGRGQRIGIFSSSGLGKSILLGMMAKYTKADVVIIGLIGERGREVKDFIENILGSN 228 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L +SVV+ A +D SP+L+ A A +IAEYF K +VLLI+DS+TR+A + R ++ + Sbjct: 229 GLSRSVVIAAPADVSPLLQIEAASYATSIAEYFRKKNKHVLLIMDSLTRYAMAQRAVSLS 288 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHNDPIADSVRSI 331 GELPV++GYP+SVFS++P L+ER G ++ G+IT+ +VL + ++ DPIA RSI Sbjct: 289 LGELPVSKGYPSSVFSKIPILVERTGNTD-NYGSITSFYTVLTESEEDPQDPIAHICRSI 347 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHIVL+R AE G YP +D S+SR+ S + LI ++ RD+ Sbjct: 348 LDGHIVLSRHYAELGHYPAIDIENSISRVMPNIISKKQYSQACYFKKLIASYQRNRDLIN 407 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 IG Y G D LD A+ PI+ FL+Q S+ SS Sbjct: 408 IGAYLKGTDSTLDHAIKIWPILERFLQQKQSEKSS 442 >gi|86146133|ref|ZP_01064459.1| flagellum-specific ATP synthase [Vibrio sp. MED222] gi|218708826|ref|YP_002416447.1| flagellum-specific ATP synthase [Vibrio splendidus LGP32] gi|85836080|gb|EAQ54212.1| flagellum-specific ATP synthase [Vibrio sp. MED222] gi|218321845|emb|CAV17818.1| Flagellum-specific ATP synthase [Vibrio splendidus LGP32] Length = 439 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 134/318 (42%), Positives = 201/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTEQRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D K+SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+ +AEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALAVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGNDEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A P + ++L+Q Sbjct: 401 AIDSAFTLKPRLDEYLQQ 418 >gi|300717234|ref|YP_003742037.1| flagellum-specific ATP synthase [Erwinia billingiae Eb661] gi|299063070|emb|CAX60190.1| Flagellum-specific ATP synthase [Erwinia billingiae Eb661] Length = 452 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 154/390 (39%), Positives = 221/390 (56%), Gaps = 18/390 (4%) Query: 54 KNSDNLG------QVIRINLDIVYICPVGIGEEISLGDLVF-------HWGR-FRISPSA 99 + +DN G +V+ N +++ P+ E I G V+ H G+ + P Sbjct: 55 ERADNNGVAEVEAEVVGFNGQRLFLMPLEEVEGILPGARVYARLSGDKHSGKQLMLGPE- 113 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG + G + I P + R + TG+R I+ + Sbjct: 114 -LLGRVLDGSGRPLDGLPAPETGYRAPLITPPFNP-LQRTPITDVLDTGVRAINALLTVG 171 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + ++V Sbjct: 172 RGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGTEGRARAV 231 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 232 VIAAPADVSPLLRMQGASYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 291 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 292 TKGYPPSVFAKLPALVERAGNGIDGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 351 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR+ V L+ ++ RD+ +G Y G Sbjct: 352 SRRLAESGHYPAIDIEASISRVMAHLIDEPHYARVRQFKQLLSSYQRNRDLVSVGAYAAG 411 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 D LDKA+ P + FL+Q + S+ D Sbjct: 412 SDPTLDKAIKLYPELETFLQQGMFERSTFD 441 >gi|15606716|ref|NP_214096.1| flagellar export protein [Aquifex aeolicus VF5] gi|3913671|sp|O67531|FLII_AQUAE RecName: Full=Flagellum-specific ATP synthase gi|2983946|gb|AAC07494.1| flagellar export protein [Aquifex aeolicus VF5] Length = 443 Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 253/428 (59%), Gaps = 12/428 (2%) Query: 1 MQKNLET--LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58 +++NL+ L + +E Y + L V G +S+ +Y + + + +G+ V Q + Sbjct: 4 IRRNLQKSYLKRCSEMYLRGLKVSGEIVSA-KGIY--LEAILPFANIGNEVEIQSNSRRI 60 Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDD 117 G+VI + D V + P + GD V + + G+V++ G P+DG Sbjct: 61 RGEVIGFSGDKVLVMPYEPVFGLRKGDKVLLKNELVSTKTGNGVVGKVVDPFGNPLDGGF 120 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + +E+ P + R+R+ + F TG+R ++ L GQ+IG+FAG+G+GKSTL Sbjct: 121 IGFVEEKGLELPQINP--LYRERIREVFDTGVRSVNALFTLGKGQKIGIFAGAGVGKSTL 178 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 L M R D V+++L+GERGREV+EF+E+ LG + LKKSVVVV+T+D+SPIL+ + Sbjct: 179 LGMITRHSKADVVVLALIGERGREVKEFLEEVLGEEGLKKSVVVVSTADQSPILKVKGAI 238 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +AV A +F+S+G +VLL++DSITR A + REI +GE P +G+ SVF L R+ E Sbjct: 239 SAVVHAHHFASQGKDVLLLMDSITRLALAQREIGLAAGEPPTLKGFTPSVFQLLTRIAES 298 Query: 297 IGPSEKEKGNITAVISVLVDGDNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 G +KG+IT + +VLV+GD+ + DPIADS+ +LDGHI+L+R A G +P VDP+ Sbjct: 299 CGAF--KKGSITGIFTVLVEGDDISLDPIADSLMGVLDGHIILSRKRAVRGLFPAVDPVR 356 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S+SRL K S + + ++ +FE+ ++ IG Y+ G + ++DK ++ + + Sbjct: 357 SLSRLMPKLVSEEHFMKANFFKEVLSKFEDVEELVRIGLYKGGSNPLVDKVINNLEKVES 416 Query: 416 FLKQSPSD 423 F KQ P + Sbjct: 417 FFKQKPEE 424 >gi|311279117|ref|YP_003941348.1| ATPase, FliI/YscN family [Enterobacter cloacae SCF1] gi|308748312|gb|ADO48064.1| ATPase, FliI/YscN family [Enterobacter cloacae SCF1] Length = 456 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG + + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGGGKPLDGLPAPDTTETGALITPPFNP-LQRTAIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGADGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALITEQHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + FL+Q Sbjct: 414 SDPMLDKAIALWPQLEAFLQQ 434 >gi|218699498|ref|YP_002407127.1| flagellum-specific ATP synthase [Escherichia coli IAI39] gi|218369484|emb|CAR17249.1| flagellum-specific ATP synthase [Escherichia coli IAI39] Length = 457 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A ++REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMALREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLESYLQQ 434 >gi|291283118|ref|YP_003499936.1| Flagellum-specific ATP synthase [Escherichia coli O55:H7 str. CB9615] gi|290762991|gb|ADD56952.1| Flagellum-specific ATP synthase [Escherichia coli O55:H7 str. CB9615] Length = 457 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|254439304|ref|ZP_05052798.1| ATPase FliI/YscN family [Octadecabacter antarcticus 307] gi|198254750|gb|EDY79064.1| ATPase FliI/YscN family [Octadecabacter antarcticus 307] Length = 444 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 135/326 (41%), Positives = 195/326 (59%), Gaps = 3/326 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 + GRV++ LG P+D D + +G + K+ + R + G+R ++ + Sbjct: 103 AYLGRVVDGLGLPLD-DSPIPEGAAKTPLNGKLLNPLARGIIPGPLDVGVRAVNGLLTIG 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219 +GQRIG+ AGSG+GKS LL M AR D V+I L+GER REV E + +G V Sbjct: 162 YGQRIGIIAGSGVGKSVLLGMMARYASADVVVIGLIGERAREVGEMVRAIMGSEPHGKVS 221 Query: 220 VVAT-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +VA +D SP+LR A +AE+F +G NVLLI+DS+TR AH+ REI GE P Sbjct: 222 IVAVPADRSPLLRIRGARRATALAEHFRDQGKNVLLIMDSLTRIAHAQREIGLALGEAPT 281 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 ++GYP SV S +P L+ER G G+IT + +VL DGD+ NDP+ D+ R+ILDGHIV Sbjct: 282 SKGYPASVISMIPALIERAGMGVGPNFGSITGIYTVLADGDDSNDPVVDTARAILDGHIV 341 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+RS+A+ G YP +D AS+SR+ + + ++K + + E RD+ L+GGY Sbjct: 342 LSRSIAQMGIYPAIDIPASISRVMNDIVPSQQQKAARKFKRFVSLYNENRDLMLMGGYVA 401 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSD 423 G DL LD+AV P + D++ QSP + Sbjct: 402 GQDLDLDQAVSVWPKLVDYINQSPEE 427 >gi|91223547|ref|ZP_01258812.1| flagellum-specific ATP synthase [Vibrio alginolyticus 12G01] gi|91191633|gb|EAS77897.1| flagellum-specific ATP synthase [Vibrio alginolyticus 12G01] Length = 439 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 136/319 (42%), Positives = 202/319 (63%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG L + + P + R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPLYTDHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGSAEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + + ++ ++ + +D+ IG Y+ G D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKSGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +D A P + ++L+QS Sbjct: 401 AIDGAFTLKPKLDEYLQQS 419 >gi|284921849|emb|CBG34924.1| flagellum-specific ATP synthase [Escherichia coli 042] Length = 457 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|330880573|gb|EGH14722.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. glycinea str. race 4] Length = 607 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/328 (43%), Positives = 200/328 (60%), Gaps = 7/328 (2%) Query: 70 VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 V++ PVG I+ G V GR + S GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSML--GRVLDGAGRPLDGRSPIKAEDWVP 134 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 135 MDGPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +++ L+GERGREV+EFIE LG+ LK+SVVV + +D++P++R A + IAEYF Sbjct: 194 ADIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +E G Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGG 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ Sbjct: 314 SITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVV 373 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIG 393 S + L R+++TRD+ +G Sbjct: 374 SPEHMARAQHFKQLWSRYQQTRDLISVG 401 >gi|296135694|ref|YP_003642936.1| flagellar protein export ATPase FliI [Thiomonas intermedia K12] gi|295795816|gb|ADG30606.1| flagellar protein export ATPase FliI [Thiomonas intermedia K12] Length = 448 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 147/361 (40%), Positives = 221/361 (61%), Gaps = 3/361 (0%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ N D V + +G + ++ G V G RI GRV++ G+P+DGD +L Sbjct: 65 EVVGFNGDHVQLMALGEVQGLTPGARVHPVPGDIRIPVGPELLGRVLDGNGRPLDGDGAL 124 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + ++ P + R V + G+R I+ + G R+G+FAGSG+GKS LL Sbjct: 125 LASHYTTLSTQQINP-LGRALVRQPLDVGVRAINALFTVGRGARMGLFAGSGVGKSVLLG 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M AR+ D +++ L+GERGREV+EFIED LG + ++VVV A +D + R A Sbjct: 184 MMARNTNADVIVVGLIGERGREVKEFIEDILGVEGRSRAVVVAAPADAPALTRIRGARLA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +AEY+ +G NVLL++DS+TR+A ++RE+A +GE P ARG+P SVF++LP L+ER G Sbjct: 244 TAMAEYYRDQGLNVLLLMDSVTRYALALREVALAAGEPPAARGFPPSVFAKLPALVERAG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + G+ITA +VL++GD+ DP+AD+VR+ILDGHIVL+R LAE+G +P +D AS+S Sbjct: 304 NGPEGGGSITAFYTVLMEGDDQQDPVADNVRAILDGHIVLSRRLAEQGHFPAIDLQASIS 363 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + E + + L + R+ +D+ +G Y PG DL LD+AV I +FL Sbjct: 364 RVMPAIATPLELRRMQKLKEMQSRYASQQDLIAVGAYTPGADLQLDQAVLAHVGIREFLI 423 Query: 419 Q 419 Q Sbjct: 424 Q 424 >gi|12516045|gb|AAG56956.1|AE005416_10 flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EDL933] Length = 496 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/318 (44%), Positives = 195/318 (61%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ GKP+DG S + I P + R +E TG+R I+ + GQ Sbjct: 157 GRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVGRGQ 215 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 216 RMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSVVIA 275 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 276 APADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKG 335 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 336 YPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRR 395 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G D Sbjct: 396 LAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKGSDP 455 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LDKA+ P + +L+Q Sbjct: 456 MLDKAIALWPQLEGYLQQ 473 >gi|301327728|ref|ZP_07220933.1| flagellar protein export ATPase FliI [Escherichia coli MS 78-1] gi|300845728|gb|EFK73488.1| flagellar protein export ATPase FliI [Escherichia coli MS 78-1] Length = 457 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|260868534|ref|YP_003234936.1| flagellum-specific ATP synthase FliI [Escherichia coli O111:H- str. 11128] gi|257764890|dbj|BAI36385.1| flagellum-specific ATP synthase FliI [Escherichia coli O111:H- str. 11128] gi|323180806|gb|EFZ66346.1| flagellar protein export ATPase FliI [Escherichia coli 1180] Length = 457 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|323968357|gb|EGB63764.1| ATPase FliI/YscN family protein [Escherichia coli M863] gi|327253073|gb|EGE64727.1| flagellar protein export ATPase FliI [Escherichia coli STEC_7v] Length = 456 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|323977878|gb|EGB72964.1| ATPase FliI/YscN family protein [Escherichia coli TW10509] Length = 456 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|301018209|ref|ZP_07182724.1| flagellar protein export ATPase FliI [Escherichia coli MS 69-1] gi|300399796|gb|EFJ83334.1| flagellar protein export ATPase FliI [Escherichia coli MS 69-1] Length = 457 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|209919363|ref|YP_002293447.1| flagellum-specific ATP synthase [Escherichia coli SE11] gi|209912622|dbj|BAG77696.1| flagellum-specific ATP synthase [Escherichia coli SE11] gi|324118990|gb|EGC12879.1| ATPase FliI/YscN family protein [Escherichia coli E1167] Length = 457 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|300923896|ref|ZP_07139911.1| flagellar protein export ATPase FliI [Escherichia coli MS 182-1] gi|300419859|gb|EFK03170.1| flagellar protein export ATPase FliI [Escherichia coli MS 182-1] Length = 457 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|157158932|ref|YP_001463243.1| flagellum-specific ATP synthase [Escherichia coli E24377A] gi|191168300|ref|ZP_03030093.1| flagellar protein export ATPase FliI [Escherichia coli B7A] gi|218689936|ref|YP_002398148.1| flagellum-specific ATP synthase [Escherichia coli ED1a] gi|256017866|ref|ZP_05431731.1| flagellum-specific ATP synthase [Shigella sp. D9] gi|300920160|ref|ZP_07136610.1| flagellar protein export ATPase FliI [Escherichia coli MS 115-1] gi|309795952|ref|ZP_07690365.1| flagellar protein export ATPase FliI [Escherichia coli MS 145-7] gi|332278892|ref|ZP_08391305.1| flagellum-specific ATP synthase [Shigella sp. D9] gi|157080962|gb|ABV20670.1| flagellar protein export ATPase FliI [Escherichia coli E24377A] gi|190901672|gb|EDV61428.1| flagellar protein export ATPase FliI [Escherichia coli B7A] gi|218427500|emb|CAR08395.2| flagellum-specific ATP synthase [Escherichia coli ED1a] gi|300412817|gb|EFJ96127.1| flagellar protein export ATPase FliI [Escherichia coli MS 115-1] gi|308120402|gb|EFO57664.1| flagellar protein export ATPase FliI [Escherichia coli MS 145-7] gi|323183925|gb|EFZ69312.1| flagellar protein export ATPase FliI [Escherichia coli 1357] gi|332101244|gb|EGJ04590.1| flagellum-specific ATP synthase [Shigella sp. D9] Length = 457 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|37680662|ref|NP_935271.1| flagellum-specific ATP synthase [Vibrio vulnificus YJ016] gi|37199411|dbj|BAC95242.1| polar flagellum-specific ATP synthase FliI [Vibrio vulnificus YJ016] Length = 441 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 135/318 (42%), Positives = 202/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + G++ I+ + GQ Sbjct: 103 GRVIDGVGNPLDGLGPIYTEHRASFNAEPINP-LARKPITEPLDVGLKAINGLLTVGKGQ 161 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D K+SVVV Sbjct: 162 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVA 221 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 222 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 281 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G ++G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 282 YPPSVFAKLPALVERAGNGGPQQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 341 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + + ++ ++ + +D+ IG Y+PG D Sbjct: 342 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 401 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A P + ++L+Q Sbjct: 402 SIDSAFTLKPKLDEYLQQ 419 >gi|331653353|ref|ZP_08354358.1| flagellar protein export ATPase FliI [Escherichia coli M718] gi|331049451|gb|EGI21523.1| flagellar protein export ATPase FliI [Escherichia coli M718] Length = 457 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|170769431|ref|ZP_02903884.1| flagellar protein export ATPase FliI [Escherichia albertii TW07627] gi|170121755|gb|EDS90686.1| flagellar protein export ATPase FliI [Escherichia albertii TW07627] Length = 456 Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTAETGALITPPFNP-LQRTPIEHVLDTGVRPINTLLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVNVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIVLWPQLEGYLQQ 434 >gi|16129888|ref|NP_416451.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr. MG1655] gi|74312481|ref|YP_310900.1| flagellum-specific ATP synthase [Shigella sonnei Ss046] gi|89108773|ref|AP_002553.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr. W3110] gi|157161412|ref|YP_001458730.1| flagellum-specific ATP synthase [Escherichia coli HS] gi|161367587|ref|NP_288402.2| flagellum-specific ATP synthase [Escherichia coli O157:H7 EDL933] gi|168751870|ref|ZP_02776892.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4113] gi|168758255|ref|ZP_02783262.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4401] gi|168764433|ref|ZP_02789440.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4501] gi|168771548|ref|ZP_02796555.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4486] gi|168777368|ref|ZP_02802375.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4196] gi|168783338|ref|ZP_02808345.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4076] gi|168790299|ref|ZP_02815306.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC869] gi|168802288|ref|ZP_02827295.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC508] gi|170019726|ref|YP_001724680.1| flagellum-specific ATP synthase [Escherichia coli ATCC 8739] gi|170081585|ref|YP_001730905.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr. DH10B] gi|188493364|ref|ZP_03000634.1| flagellar protein export ATPase FliI [Escherichia coli 53638] gi|193066385|ref|ZP_03047433.1| flagellar protein export ATPase FliI [Escherichia coli E22] gi|193071153|ref|ZP_03052077.1| flagellar protein export ATPase FliI [Escherichia coli E110019] gi|194429929|ref|ZP_03062439.1| flagellar protein export ATPase FliI [Escherichia coli B171] gi|194439572|ref|ZP_03071645.1| flagellar protein export ATPase FliI [Escherichia coli 101-1] gi|195939247|ref|ZP_03084629.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4024] gi|208810598|ref|ZP_03252474.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4206] gi|208816723|ref|ZP_03257843.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4045] gi|208820040|ref|ZP_03260360.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4042] gi|209400005|ref|YP_002271057.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4115] gi|217328784|ref|ZP_03444865.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. TW14588] gi|218554521|ref|YP_002387434.1| flagellum-specific ATP synthase [Escherichia coli IAI1] gi|218695546|ref|YP_002403213.1| flagellum-specific ATP synthase [Escherichia coli 55989] gi|238901146|ref|YP_002926942.1| flagellum-specific ATP synthase [Escherichia coli BW2952] gi|253773110|ref|YP_003035941.1| flagellum-specific ATP synthase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254793591|ref|YP_003078428.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. TW14359] gi|256022401|ref|ZP_05436266.1| flagellum-specific ATP synthase [Escherichia sp. 4_1_40B] gi|260844340|ref|YP_003222118.1| flagellum-specific ATP synthase FliI [Escherichia coli O103:H2 str. 12009] gi|260855916|ref|YP_003229807.1| flagellum-specific ATP synthase FliI [Escherichia coli O26:H11 str. 11368] gi|261227564|ref|ZP_05941845.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. FRIK2000] gi|261254612|ref|ZP_05947145.1| flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str. FRIK966] gi|293410297|ref|ZP_06653873.1| flagellar protein export ATPase FliI [Escherichia coli B354] gi|300818639|ref|ZP_07098847.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1] gi|300822289|ref|ZP_07102430.1| flagellar protein export ATPase FliI [Escherichia coli MS 119-7] gi|300931154|ref|ZP_07146501.1| flagellar protein export ATPase FliI [Escherichia coli MS 187-1] gi|300951566|ref|ZP_07165399.1| flagellar protein export ATPase FliI [Escherichia coli MS 116-1] gi|300956543|ref|ZP_07168825.1| flagellar protein export ATPase FliI [Escherichia coli MS 175-1] gi|301029398|ref|ZP_07192492.1| flagellar protein export ATPase FliI [Escherichia coli MS 196-1] gi|307138608|ref|ZP_07497964.1| flagellum-specific ATP synthase [Escherichia coli H736] gi|307312473|ref|ZP_07592107.1| ATPase, FliI/YscN family [Escherichia coli W] gi|312973842|ref|ZP_07788014.1| flagellar protein export ATPase FliI [Escherichia coli 1827-70] gi|331642562|ref|ZP_08343697.1| flagellar protein export ATPase FliI [Escherichia coli H736] gi|331647535|ref|ZP_08348627.1| flagellar protein export ATPase FliI [Escherichia coli M605] gi|331663437|ref|ZP_08364347.1| flagellar protein export ATPase FliI [Escherichia coli TA143] gi|331668632|ref|ZP_08369480.1| flagellar protein export ATPase FliI [Escherichia coli TA271] gi|331683493|ref|ZP_08384094.1| flagellar protein export ATPase FliI [Escherichia coli H299] gi|2506213|sp|P52612|FLII_ECOLI RecName: Full=Flagellum-specific ATP synthase gi|1736607|dbj|BAA15766.1| flagellum-specific ATP synthase [Escherichia coli str. K12 substr. W3110] gi|1788251|gb|AAC75008.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr. MG1655] gi|73855958|gb|AAZ88665.1| flagellum-specific ATP synthase [Shigella sonnei Ss046] gi|157067092|gb|ABV06347.1| flagellar protein export ATPase FliI [Escherichia coli HS] gi|169754654|gb|ACA77353.1| ATPase, FliI/YscN family [Escherichia coli ATCC 8739] gi|169889420|gb|ACB03127.1| flagellum-specific ATP synthase [Escherichia coli str. K-12 substr. DH10B] gi|187767372|gb|EDU31216.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4196] gi|188014164|gb|EDU52286.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4113] gi|188488563|gb|EDU63666.1| flagellar protein export ATPase FliI [Escherichia coli 53638] gi|188999264|gb|EDU68250.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4076] gi|189354924|gb|EDU73343.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4401] gi|189359728|gb|EDU78147.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4486] gi|189365543|gb|EDU83959.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4501] gi|189370203|gb|EDU88619.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC869] gi|189375695|gb|EDU94111.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC508] gi|192925970|gb|EDV80616.1| flagellar protein export ATPase FliI [Escherichia coli E22] gi|192955548|gb|EDV86027.1| flagellar protein export ATPase FliI [Escherichia coli E110019] gi|194412018|gb|EDX28330.1| flagellar protein export ATPase FliI [Escherichia coli B171] gi|194421481|gb|EDX37495.1| flagellar protein export ATPase FliI [Escherichia coli 101-1] gi|208725114|gb|EDZ74821.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4206] gi|208731066|gb|EDZ79755.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4045] gi|208740163|gb|EDZ87845.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4042] gi|209161405|gb|ACI38838.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. EC4115] gi|209748380|gb|ACI72497.1| flagellum-specific ATP synthase [Escherichia coli] gi|209748382|gb|ACI72498.1| flagellum-specific ATP synthase [Escherichia coli] gi|209748384|gb|ACI72499.1| flagellum-specific ATP synthase [Escherichia coli] gi|217318131|gb|EEC26558.1| flagellar protein export ATPase FliI [Escherichia coli O157:H7 str. TW14588] gi|218352278|emb|CAU98035.1| flagellum-specific ATP synthase [Escherichia coli 55989] gi|218361289|emb|CAQ98873.1| flagellum-specific ATP synthase [Escherichia coli IAI1] gi|222033680|emb|CAP76421.1| flagellum-specific ATP synthase [Escherichia coli LF82] gi|238861118|gb|ACR63116.1| flagellum-specific ATP synthase [Escherichia coli BW2952] gi|253324154|gb|ACT28756.1| ATPase, FliI/YscN family [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254592991|gb|ACT72352.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. TW14359] gi|257754565|dbj|BAI26067.1| flagellum-specific ATP synthase FliI [Escherichia coli O26:H11 str. 11368] gi|257759487|dbj|BAI30984.1| flagellum-specific ATP synthase FliI [Escherichia coli O103:H2 str. 12009] gi|260448946|gb|ACX39368.1| ATPase, FliI/YscN family [Escherichia coli DH1] gi|281179003|dbj|BAI55333.1| flagellum-specific ATP synthase [Escherichia coli SE15] gi|291470765|gb|EFF13249.1| flagellar protein export ATPase FliI [Escherichia coli B354] gi|299877702|gb|EFI85913.1| flagellar protein export ATPase FliI [Escherichia coli MS 196-1] gi|300316643|gb|EFJ66427.1| flagellar protein export ATPase FliI [Escherichia coli MS 175-1] gi|300449193|gb|EFK12813.1| flagellar protein export ATPase FliI [Escherichia coli MS 116-1] gi|300461011|gb|EFK24504.1| flagellar protein export ATPase FliI [Escherichia coli MS 187-1] gi|300525172|gb|EFK46241.1| flagellar protein export ATPase FliI [Escherichia coli MS 119-7] gi|300528811|gb|EFK49873.1| flagellar protein export ATPase FliI [Escherichia coli MS 107-1] gi|306907644|gb|EFN38147.1| ATPase, FliI/YscN family [Escherichia coli W] gi|309702230|emb|CBJ01547.1| flagellum-specific ATP synthase [Escherichia coli ETEC H10407] gi|310332437|gb|EFP99672.1| flagellar protein export ATPase FliI [Escherichia coli 1827-70] gi|312946534|gb|ADR27361.1| flagellum-specific ATP synthase [Escherichia coli O83:H1 str. NRG 857C] gi|315061241|gb|ADT75568.1| flagellum-specific ATP synthase [Escherichia coli W] gi|315136578|dbj|BAJ43737.1| flagellum-specific ATP synthase [Escherichia coli DH1] gi|320191915|gb|EFW66562.1| Flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str. EC1212] gi|320641789|gb|EFX11177.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. G5101] gi|320647148|gb|EFX15981.1| flagellum-specific ATP synthase [Escherichia coli O157:H- str. 493-89] gi|320652432|gb|EFX20730.1| flagellum-specific ATP synthase [Escherichia coli O157:H- str. H 2687] gi|320658034|gb|EFX25796.1| flagellum-specific ATP synthase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658606|gb|EFX26300.1| flagellum-specific ATP synthase [Escherichia coli O55:H7 str. USDA 5905] gi|320668504|gb|EFX35331.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. LSU-61] gi|323152728|gb|EFZ39000.1| flagellar protein export ATPase FliI [Escherichia coli EPECa14] gi|323158580|gb|EFZ44594.1| flagellar protein export ATPase FliI [Escherichia coli E128010] gi|323168940|gb|EFZ54620.1| flagellar protein export ATPase FliI [Shigella sonnei 53G] gi|323174680|gb|EFZ60300.1| flagellar protein export ATPase FliI [Escherichia coli LT-68] gi|323378182|gb|ADX50450.1| ATPase, FliI/YscN family [Escherichia coli KO11] gi|323937211|gb|EGB33491.1| ATPase FliI/YscN family protein [Escherichia coli E1520] gi|323940400|gb|EGB36591.1| ATPase FliI/YscN family protein [Escherichia coli E482] gi|323948355|gb|EGB44342.1| ATPase FliI/YscN family protein [Escherichia coli H120] gi|323961985|gb|EGB57584.1| ATPase FliI/YscN family protein [Escherichia coli H489] gi|323972759|gb|EGB67959.1| ATPase FliI/YscN family protein [Escherichia coli TA007] gi|324018849|gb|EGB88068.1| flagellar protein export ATPase FliI [Escherichia coli MS 117-3] gi|326344856|gb|EGD68603.1| Flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str. 1125] gi|330911747|gb|EGH40257.1| flagellum-specific ATP synthase FliI [Escherichia coli AA86] gi|331039360|gb|EGI11580.1| flagellar protein export ATPase FliI [Escherichia coli H736] gi|331043259|gb|EGI15397.1| flagellar protein export ATPase FliI [Escherichia coli M605] gi|331059236|gb|EGI31213.1| flagellar protein export ATPase FliI [Escherichia coli TA143] gi|331063826|gb|EGI35737.1| flagellar protein export ATPase FliI [Escherichia coli TA271] gi|331079708|gb|EGI50905.1| flagellar protein export ATPase FliI [Escherichia coli H299] gi|332093102|gb|EGI98166.1| flagellar protein export ATPase FliI [Shigella boydii 5216-82] gi|332343667|gb|AEE57001.1| flagellar protein export ATPase FliI [Escherichia coli UMNK88] Length = 457 Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|59712456|ref|YP_205232.1| flagellum-specific ATP synthase [Vibrio fischeri ES114] gi|197335284|ref|YP_002156675.1| flagellar protein export ATPase FliI [Vibrio fischeri MJ11] gi|59480557|gb|AAW86344.1| flagellum-specific ATP synthase FliI [Vibrio fischeri ES114] gi|197316774|gb|ACH66221.1| flagellar protein export ATPase FliI [Vibrio fischeri MJ11] Length = 439 Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 135/336 (40%), Positives = 209/336 (62%), Gaps = 2/336 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ +G PIDG L + + P ++R+ + + G++ I+ + GQ Sbjct: 102 GRVVDGVGNPIDGLGELYTEHTASFTSEPINP-LSRKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG + ++SVVV Sbjct: 161 RLGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGPEGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D S ++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASALMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G + +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGNENQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITDEEHMLMSKAVRQVLSTCRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 +D+A P + ++L+Q + D+ + + K L Sbjct: 401 AIDQAFTLKPRLDEYLQQRMKESVPYDMCKNMLKML 436 >gi|15831934|ref|NP_310707.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. Sakai] gi|13362148|dbj|BAB36103.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. Sakai] gi|326342351|gb|EGD66132.1| Flagellum-specific ATP synthase FliI [Escherichia coli O157:H7 str. 1044] Length = 457 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|107025875|ref|YP_623386.1| ATP synthase FliI/YscN [Burkholderia cenocepacia AU 1054] gi|105895249|gb|ABF78413.1| ATP synthase FliI/YscN [Burkholderia cenocepacia AU 1054] Length = 458 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 160/382 (41%), Positives = 220/382 (57%), Gaps = 10/382 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 76 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGEGLFGRVLDGLGRPLD-DR 134 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 135 GPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGIGQRVGIFAPSGVGKSTL 194 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 195 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 254 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A IAE+F G VLL++DS+TRFA + RE+ SGE P R +P S F+ LPRLLER Sbjct: 255 VATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTRRSFPPSTFAVLPRLLER 314 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + G+ITA+ +VLV+G +DPIA+ VRSILDGHIVL+R +A RYP +D LAS Sbjct: 315 AG--QGAHGSITALYTVLVEGGEESDPIAEEVRSILDGHIVLSRKIALANRYPAIDVLAS 372 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ S + + + LI +++E + IG YR G D + D A+ I F Sbjct: 373 LSRVMPLVASRAHQHAAARVRELIAKYQEIELLVQIGEYREGSDRLGDLALRARDAIGAF 432 Query: 417 LKQSPSDLSSEDV-FQEITKKL 437 Q+ S EDV F + KL Sbjct: 433 CAQA----SDEDVRFDALLAKL 450 >gi|189426350|ref|YP_001953527.1| flagellar protein export ATPase FliI [Geobacter lovleyi SZ] gi|189422609|gb|ACD97007.1| flagellar protein export ATPase FliI [Geobacter lovleyi SZ] Length = 432 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 142/335 (42%), Positives = 203/335 (60%), Gaps = 6/335 (1%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ P GRVI+ LG PID L D I + M R + + GIR I Sbjct: 89 LRVGPG--LLGRVIDGLGNPIDDKGPL-HLDEEYPIYAAPVNPMKRPPIRRPLDLGIRSI 145 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 + GQR+G+ AGSG+GKSTLL M AR D +I+L+GERGRE+REF+E L + Sbjct: 146 NGLLTCGQGQRVGIMAGSGVGKSTLLGMIARYTEADVNVIALIGERGRELREFVEKDLQE 205 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 L KSVVVVATSD+ P++R A TIAEYF +G VL+++DS TRFA ++RE+ Sbjct: 206 QGLHKSVVVVATSDQPPLVRMRGAYLATTIAEYFKDQGKKVLMMMDSATRFAMAMREVGL 265 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 GE P +GY SVF+ LP+LLER G +G+IT + +VLV+GD+ N+PI+D++RSI Sbjct: 266 AIGEPPTTKGYTPSVFAALPKLLERTG--NFPEGSITGLYTVLVEGDDFNEPISDAMRSI 323 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHIVL+R LA YPP+D +AS SR+ +KL + + ++ D+ Sbjct: 324 LDGHIVLSRDLAARNIYPPIDIMASASRVMADVADERHRKLAGQFKETLATYRQSEDLIN 383 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 IG Y+ G + +D+A+ ++ + + KQ+ +D ++ Sbjct: 384 IGAYKAGSNPGIDQAIRKIDAMTAYQKQAVADPAT 418 >gi|90411026|ref|ZP_01219040.1| flagellum-specific ATP synthase [Photobacterium profundum 3TCK] gi|90328239|gb|EAS44550.1| flagellum-specific ATP synthase [Photobacterium profundum 3TCK] Length = 440 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 156/401 (38%), Positives = 236/401 (58%), Gaps = 25/401 (6%) Query: 32 VYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDL----- 86 V T+ + +G + + N D +V+ + +I+++ P E LG + Sbjct: 31 VGLTLEAIGCRAPVGSLCIVETLNGDLEAEVVGFSGEILFLMP----SEQLLGVMPGAKV 86 Query: 87 --VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMN---RQR 140 V H + GRVI+ +G P+DG GD+ E S PA+N R+ Sbjct: 87 TPVLHDNGLPVGSE--LLGRVIDGVGNPLDG-----LGDIFTEKRASFTSPAINPLSRKP 139 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +++ GI+ I+ + GQRIG+FAGSG+GKS L M R V++ L+GERGR Sbjct: 140 IKEPLDVGIKAINGLLSVGKGQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGR 199 Query: 201 EVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV+EFI++ LG+ K++VV+ A +D SP++R TA+TIAEYF +G +VLL++DS+ Sbjct: 200 EVKEFIDEILGEEGRKRAVVIAAPADTSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSL 259 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA + REIA + GE P +GYP SVF++LP L+ER G ++G+ITA +VL +GD+ Sbjct: 260 TRFAQAQREIALSVGEPPATKGYPPSVFAKLPALVERAGNGSGDQGSITAFFTVLTEGDD 319 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DPIAD+ R+ILDGHIVL+R +A+ G YP +D SVSR+ A DE L+S ++ Sbjct: 320 LQDPIADASRAILDGHIVLSREMADAGHYPAIDVERSVSRVM-PAIVDDEHMLMSKAVRQ 378 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 ++ + +D+ IG Y+PG D +D+A P + +L+Q Sbjct: 379 ILSICRKNQDLVSIGAYKPGTDPNIDQAFSFKPKLDAYLQQ 419 >gi|300904831|ref|ZP_07122657.1| flagellar protein export ATPase FliI [Escherichia coli MS 84-1] gi|301305284|ref|ZP_07211381.1| flagellar protein export ATPase FliI [Escherichia coli MS 124-1] gi|300403258|gb|EFJ86796.1| flagellar protein export ATPase FliI [Escherichia coli MS 84-1] gi|300839490|gb|EFK67250.1| flagellar protein export ATPase FliI [Escherichia coli MS 124-1] gi|315257227|gb|EFU37195.1| flagellar protein export ATPase FliI [Escherichia coli MS 85-1] Length = 457 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAITALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|218887523|ref|YP_002436844.1| type III secretion system ATPase [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758477|gb|ACL09376.1| type III secretion apparatus H+-transporting two-sector ATPase [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 438 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 145/327 (44%), Positives = 204/327 (62%), Gaps = 4/327 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG+P+DG L K + ++ P M R+ +++ G+RV+D GQ Sbjct: 104 GRVLDGLGEPMDGGPPL-KPRTRYPVYAQPPNPMQRRIIDRPISLGLRVLDGVLTCGEGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FA +G GKSTLLS + D +++L+GERGREVREFIE LG + KK+V+VV Sbjct: 163 RMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIGERGREVREFIEHDLGPEGRKKAVLVV 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +TSD S + R A TA IAEYF + +VLL++DS+TRF + REI +GE P RG Sbjct: 223 STSDRSSMERLKAAYTATAIAEYFRDQRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVFS LPRL+ER G S+K G+ITA+ +VLV+GD+ +PIAD RSILDGHIVL+R Sbjct: 283 FPPSVFSTLPRLMERAGNSDK--GSITALYTVLVEGDDMTEPIADETRSILDGHIVLSRK 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA YP +D ASVSR+ + + K L ++ ++ E + IG Y+ G D Sbjct: 341 LAAANHYPAIDVQASVSRVMNAIVDKEHKAAAQKLRKVLAKYAEVELLVQIGEYKRGSDK 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 D+A+ +V + FL+Q + S D Sbjct: 401 EADEALDRVAAVNAFLRQGLDERSGFD 427 >gi|293446321|ref|ZP_06662743.1| flagellar protein export ATPase FliI [Escherichia coli B088] gi|291323151|gb|EFE62579.1| flagellar protein export ATPase FliI [Escherichia coli B088] Length = 467 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 125 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 183 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 184 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 243 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 244 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 303 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 304 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 363 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 364 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 423 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 424 SDPMLDKAIALWPQLEGYLQQ 444 >gi|253688955|ref|YP_003018145.1| ATPase, FliI/YscN family [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755533|gb|ACT13609.1| ATPase, FliI/YscN family [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 456 Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 139/318 (43%), Positives = 192/318 (60%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ KP+DG + G + I P + R +E G+R I+ + GQ Sbjct: 117 GRVLDGSAKPLDGLPAPDTGYRAPLITPPFNP-LQRTPIESVLDVGVRAINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SVV+ Sbjct: 176 RMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGRARSVVIA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P +G Sbjct: 236 APADVSPLLRMQGAAYATRIAEDFRDRGYHVLLIMDSLTRYAMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G G++TA +VL +GD+ DPIADS R+ILDGHIVL+R Sbjct: 296 YPPSVFAKLPALVERAGNGIHGGGSVTAFYTVLTEGDDQQDPIADSARAILDGHIVLSRQ 355 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR V L+ ++ RD+ +G Y G D Sbjct: 356 LAESGHYPAIDIEASISRAMTALIDEGHYASVRQFKQLLSSYQRNRDLVSVGAYAAGSDP 415 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LDKA+ P + FL+Q Sbjct: 416 MLDKAIRLYPHLEAFLQQ 433 >gi|323496552|ref|ZP_08101606.1| flagellum-specific ATP synthase [Vibrio sinaloensis DSM 21326] gi|323318396|gb|EGA71353.1| flagellum-specific ATP synthase [Vibrio sinaloensis DSM 21326] Length = 440 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 135/319 (42%), Positives = 202/319 (63%), Gaps = 2/319 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTEKRASFNADPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G ++G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R Sbjct: 281 YPPSVFAKLPALVERAGNGSPDQGSITAFFTVLTEGDDLQDPIADASRAILDGHVVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + S + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITSEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQS 420 +D A P + +L+Q+ Sbjct: 401 AIDGAFTIKPKLDGYLQQA 419 >gi|258626180|ref|ZP_05721028.1| flagellum-specific ATP synthase [Vibrio mimicus VM603] gi|258581535|gb|EEW06436.1| flagellum-specific ATP synthase [Vibrio mimicus VM603] Length = 439 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 204/320 (63%), Gaps = 4/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAVPINP-LARKPISEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTD 399 Query: 401 LILDKAVHQVPIIYDFLKQS 420 +D A P + +L+Q+ Sbjct: 400 KAIDAAFTLKPKLDQYLQQA 419 >gi|330809240|ref|YP_004353702.1| flagellum-specific ATP synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327377348|gb|AEA68698.1| Putative flagellum-specific ATP synthase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 450 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 159/420 (37%), Positives = 251/420 (59%), Gaps = 9/420 (2%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLG-QVIRINLDIVYICPVGIGEEI 81 G +SSI + T L V LG+ V +H + + + +V+ + + + P G + + Sbjct: 25 GRLSSIQGMVLHATGLD--VRLGELVDIHPARGGEVIAAEVVGLRSESTLLMPYGPVDGL 82 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 L V G + + A GRV++A P+D + ++ + P ++R Sbjct: 83 CLASEVHARGTPYTVPVGASLLGRVLDATCNPLDDLPAPEGLTRKPRFVAPINP-LHRSP 141 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 ++ TG++ +D+FTPL GQRIG+FAGSG+GKSTLL M ++ D ++I+L+GERGR Sbjct: 142 IDTTLLTGVKAVDVFTPLGRGQRIGIFAGSGVGKSTLLGMMSKYADADVIVIALIGERGR 201 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV +FI D LG + LKK+VV+ A +++ +LR+ A TA TIAE+F ++G +VLLI+DSI Sbjct: 202 EVGDFIRDSLGPEGLKKAVVIAAAAEQPAVLRRQAAYTATTIAEWFRAQGKHVLLIMDSI 261 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA + REI ++GE +RGY SVF+ LP L+ER G + +G+IT V +VLV+GD+ Sbjct: 262 TRFALAQREIGLSTGEPMGSRGYTPSVFALLPPLMERAG-ALNGQGSITGVYTVLVEGDD 320 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 N+P+AD +R+ILDGHIVL+RS+A G +P +D L S+SRL + + K V L Sbjct: 321 MNEPVADHMRAILDGHIVLSRSVAARGHWPAIDVLHSISRLVGALHTPERKTQVERLRSA 380 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKLQ 438 + ++ + D+ +G Y G +LD + P L+Q+P + S+ +Q + + +Q Sbjct: 381 LGNYQNSVDLIELGAYEKGSQPLLDTMIDLKPEFDALLQQTPQEHFSASSTWQTVQQLVQ 440 >gi|153834126|ref|ZP_01986793.1| flagellar protein export ATPase FliI [Vibrio harveyi HY01] gi|156975428|ref|YP_001446335.1| flagellum-specific ATP synthase [Vibrio harveyi ATCC BAA-1116] gi|269961622|ref|ZP_06175984.1| flagellum-specific ATP synthase [Vibrio harveyi 1DA3] gi|148869496|gb|EDL68494.1| flagellar protein export ATPase FliI [Vibrio harveyi HY01] gi|156527022|gb|ABU72108.1| hypothetical protein VIBHAR_03159 [Vibrio harveyi ATCC BAA-1116] gi|269833663|gb|EEZ87760.1| flagellum-specific ATP synthase [Vibrio harveyi 1DA3] Length = 439 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 135/318 (42%), Positives = 202/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG L + + P + R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPLYTDHRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGEDGRRRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G ++G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGDDQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A P + ++L+Q Sbjct: 401 AIDGAFTLKPKLDEYLQQ 418 >gi|296103561|ref|YP_003613707.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295058020|gb|ADF62758.1| flagellum-specific ATP synthase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 456 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 142/321 (44%), Positives = 195/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG + + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPAPDTTETGALITQPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALITEKHYARVRNFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + FL+Q Sbjct: 414 SDPMLDKAISLWPQLEAFLQQ 434 >gi|84388114|ref|ZP_00991010.1| flagellum-specific ATP synthase [Vibrio splendidus 12B01] gi|84377181|gb|EAP94051.1| flagellum-specific ATP synthase [Vibrio splendidus 12B01] Length = 439 Score = 256 bits (653), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 134/318 (42%), Positives = 201/318 (63%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTEQRASFNAEPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D K+SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTNAQVVVVGLIGERGREVKEFIEEILGEDGRKRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+ +AEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALAVAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G E+G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGNDEQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQITTEEHVLMSKAVRQVLSICRKNQDLVSIGAYKPGTDP 400 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D A P + ++L+Q Sbjct: 401 AIDSAFTLKPRLDEYLQQ 418 >gi|253998471|ref|YP_003050534.1| FliI/YscN family ATPase [Methylovorus sp. SIP3-4] gi|313200546|ref|YP_004039204.1| FliI/YscN family ATPase [Methylovorus sp. MP688] gi|253985150|gb|ACT50007.1| ATPase, FliI/YscN family [Methylovorus sp. SIP3-4] gi|312439862|gb|ADQ83968.1| ATPase, FliI/YscN family [Methylovorus sp. MP688] Length = 468 Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 139/318 (43%), Positives = 197/318 (61%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G+P+D L + S+ + ++ + R + G+R I+ + GQ Sbjct: 131 GRVVDGAGRPLDDLGPLLTQN-SVPLNTRPLNPLMRAPITDVLDVGVRAINSMLTVGRGQ 189 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG D L +SVVV Sbjct: 190 RMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVKEFIEQILGTDGLARSVVVA 249 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D ++R A IAE+F ++G NVLLI+DS+TR+A + REIA GE P +G Sbjct: 250 APADVPALMRLQGASYATAIAEFFRNQGKNVLLIMDSLTRYAMAQREIALAIGEPPATKG 309 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+RS Sbjct: 310 YPPSVFAKLPALVERAGNGRPGEGSITAFYTVLTEGDDQQDPIADAARAILDGHIVLSRS 369 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D S+SR + +KL L L R+ + D+ +G Y G D Sbjct: 370 LAESGHYPAIDIEQSISRAMHNITLPEHQKLSRRLKQLNSRYTRSADLINVGAYEAGSDP 429 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LD+A+ + I FL+Q Sbjct: 430 VLDEAIAKHTKIEAFLQQ 447 >gi|261209866|ref|ZP_05924167.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC341] gi|260841052|gb|EEX67577.1| flagellum-specific ATP synthase FliI [Vibrio sp. RC341] Length = 439 Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 138/319 (43%), Positives = 204/319 (63%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + + P + R+ + + G++ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAAPINP-LARKPISEPLDVGLKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTD 399 Query: 401 LILDKAVHQVPIIYDFLKQ 419 +D A P + +L+Q Sbjct: 400 KAIDAAFTLKPKLDQYLQQ 418 >gi|11095421|gb|AAG29861.1|AF313764_4 probable H+-transporting ATP synthase [Zymomonas mobilis subsp. mobilis ZM4] Length = 443 Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 137/321 (42%), Positives = 199/321 (61%), Gaps = 6/321 (1%) Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRVI ALG+P+D +LG D ++ K+ +NR RV F G+R I+ Sbjct: 105 LGRVIGALGEPLD---NLGPIITDEYWPLVGKMGNPLNRGRVTSPFDMGVRAINALLTAG 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218 GQRI + AGSG+GKS L+ D ++ L+GER REV +F+E + D+++ KSV Sbjct: 162 VGQRIAIMAGSGVGKSVLMGQMIAGAKADVIVTGLIGERSREVTDFVETKISDDVRPKSV 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV ++D P+LR A + A IAEYF +KG NVLL+ DS+TR AH+ RE+ + GE P Sbjct: 222 VVAGSADHPPVLRLRAAMRATAIAEYFRAKGKNVLLLNDSLTRIAHAQREVGLSLGEPPT 281 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP S +PRL+ER G KG ITA+ +VL DGD+ +DPI D+ R+I+DGHI+L Sbjct: 282 IKGYPPSALGLIPRLVERAGIDIHSKGAITAIYTVLADGDDPDDPIVDTARAIVDGHIIL 341 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +RSLAE+G +P +D S+SR+ S ++ + L L +EE RD+ L+G YR G Sbjct: 342 SRSLAEQGVFPAIDLGKSLSRVMSDIISPGHRQAAAHLRRLWSVYEENRDLILMGAYRSG 401 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +D+A+++ + DF++Q Sbjct: 402 TDASIDEAINRHNDVLDFIRQ 422 >gi|170682688|ref|YP_001743304.1| flagellum-specific ATP synthase [Escherichia coli SMS-3-5] gi|170520406|gb|ACB18584.1| flagellar protein export ATPase FliI [Escherichia coli SMS-3-5] Length = 457 Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 143/321 (44%), Positives = 194/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSFGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|78355397|ref|YP_386846.1| ATPase FliI/YscN [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217802|gb|ABB37151.1| type III secretion system ATPase, FliI/YscN [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 440 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 141/327 (43%), Positives = 203/327 (62%), Gaps = 4/327 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR +A G P+DG ++ I ++ P ++R R++ G+R I+ L GQ Sbjct: 100 GRAFDAFGAPMDGS-TMPPVAGHNPIYAQPPNPLSRPRIDDPLDVGVRCINSLITLGKGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+ AGSG+GKSTL+ M AR D +I+L+GERGREV EF+E LG + + +SV+++ Sbjct: 159 RVGIMAGSGVGKSTLMGMMARYTSADVNVIALIGERGREVVEFMEKDLGPEGMARSVLII 218 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+SP++R A A +AE+F +G +VLL++DS+TRFA + RE+ GE P +G Sbjct: 219 ATSDQSPLVRMRAAYAATAVAEFFRDQGKDVLLMMDSVTRFAMAAREVGLAVGEPPTTKG 278 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y +VF++LP+LLER G G IT + +VLVDGD+ N+PIAD+VRSILDGHIVL R Sbjct: 279 YTPTVFAQLPKLLERAG--RNRHGTITGIYTVLVDGDDFNEPIADAVRSILDGHIVLTRD 336 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G YP +D L S+SRL + +LT + F + D+ IG Y G + Sbjct: 337 LADMGHYPAIDVLRSISRLRTDICPQEVIAAGRTLTRHLATFRKVEDMINIGAYAQGSNP 396 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 +D+A+ VP I FL+Q D + D Sbjct: 397 DIDQAIGMVPRINQFLQQQVQDKQAID 423 >gi|15642129|ref|NP_231761.1| flagellum-specific ATP synthase [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121586784|ref|ZP_01676566.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 2740-80] gi|121727214|ref|ZP_01680381.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V52] gi|153213229|ref|ZP_01948641.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 1587] gi|153818975|ref|ZP_01971642.1| flagellum-specific ATP synthase FliI [Vibrio cholerae NCTC 8457] gi|153822887|ref|ZP_01975554.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33] gi|153828592|ref|ZP_01981259.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 623-39] gi|227082255|ref|YP_002810806.1| flagellum-specific ATP synthase FliI [Vibrio cholerae M66-2] gi|229507785|ref|ZP_04397290.1| flagellum-specific ATP synthase FliI [Vibrio cholerae BX 330286] gi|229511978|ref|ZP_04401457.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33] gi|229519114|ref|ZP_04408557.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC9] gi|229607330|ref|YP_002877978.1| flagellum-specific ATP synthase [Vibrio cholerae MJ-1236] gi|254226362|ref|ZP_04919951.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V51] gi|254291367|ref|ZP_04962160.1| flagellum-specific ATP synthase FliI [Vibrio cholerae AM-19226] gi|254849216|ref|ZP_05238566.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MO10] gi|255745131|ref|ZP_05419080.1| flagellum-specific ATP synthase FliI [Vibrio cholera CIRS 101] gi|262153479|ref|ZP_06028609.1| flagellum-specific ATP synthase FliI [Vibrio cholerae INDRE 91/1] gi|262191380|ref|ZP_06049570.1| flagellum-specific ATP synthase FliI [Vibrio cholerae CT 5369-93] gi|298497848|ref|ZP_07007655.1| flagellar protein export ATPase FliI [Vibrio cholerae MAK 757] gi|9656681|gb|AAF95275.1| flagellum-specific ATP synthase FliI [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548951|gb|EAX58990.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 2740-80] gi|121630459|gb|EAX62852.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V52] gi|124116029|gb|EAY34849.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 1587] gi|125621112|gb|EAZ49457.1| flagellum-specific ATP synthase FliI [Vibrio cholerae V51] gi|126510470|gb|EAZ73064.1| flagellum-specific ATP synthase FliI [Vibrio cholerae NCTC 8457] gi|126519583|gb|EAZ76806.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33] gi|148875863|gb|EDL73998.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 623-39] gi|150422697|gb|EDN14651.1| flagellum-specific ATP synthase FliI [Vibrio cholerae AM-19226] gi|227010143|gb|ACP06355.1| flagellum-specific ATP synthase FliI [Vibrio cholerae M66-2] gi|229343803|gb|EEO08778.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC9] gi|229351943|gb|EEO16884.1| flagellum-specific ATP synthase FliI [Vibrio cholerae B33] gi|229355290|gb|EEO20211.1| flagellum-specific ATP synthase FliI [Vibrio cholerae BX 330286] gi|229369985|gb|ACQ60408.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MJ-1236] gi|254844921|gb|EET23335.1| flagellum-specific ATP synthase FliI [Vibrio cholerae MO10] gi|255736961|gb|EET92357.1| flagellum-specific ATP synthase FliI [Vibrio cholera CIRS 101] gi|262030716|gb|EEY49350.1| flagellum-specific ATP synthase FliI [Vibrio cholerae INDRE 91/1] gi|262032755|gb|EEY51303.1| flagellum-specific ATP synthase FliI [Vibrio cholerae CT 5369-93] gi|297542181|gb|EFH78231.1| flagellar protein export ATPase FliI [Vibrio cholerae MAK 757] Length = 439 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 204/320 (63%), Gaps = 4/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAIPINP-LARKPINEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGTD 399 Query: 401 LILDKAVHQVPIIYDFLKQS 420 +D A P + +L+Q+ Sbjct: 400 KAIDAAFTLKPKLDQYLQQA 419 >gi|271500083|ref|YP_003333108.1| flagellar protein export ATPase FliI [Dickeya dadantii Ech586] gi|270343638|gb|ACZ76403.1| flagellar protein export ATPase FliI [Dickeya dadantii Ech586] Length = 456 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 142/330 (43%), Positives = 198/330 (60%), Gaps = 2/330 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ KP+DG + G S +M+ + R +E G+R I+ + Sbjct: 114 ALLGRVLDGSAKPLDGLPTPDTG-YSAPLMTAPFNPLQRTPIEHVLDVGVRAINALLTVG 172 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + L +SV Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGLARSV 232 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPA 292 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 293 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 352 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + V + ++ RD+ +G Y G Sbjct: 353 SRQLAESGHYPAIDIEASISRAMTALIDENHYSAVRQFKQSLSSYQRNRDLINVGAYAAG 412 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 D +LD+A+ P + FL+Q + SS D Sbjct: 413 SDPMLDRAIQLYPQMQHFLQQGMFERSSFD 442 >gi|215487141|ref|YP_002329572.1| flagellum-specific ATP synthase [Escherichia coli O127:H6 str. E2348/69] gi|215265213|emb|CAS09603.1| flagellum-specific ATP synthase FliI [Escherichia coli O127:H6 str. E2348/69] Length = 457 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLESYLQQ 434 >gi|16520041|ref|NP_444161.1| ATPase RhcN for type III secretion [Sinorhizobium fredii NGR234] gi|2493150|sp|P55717|Y4YI_RHISN RecName: Full=Probable ATP synthase y4yI gi|2182734|gb|AAB91948.1| ATPase RhcN for type III secretion [Sinorhizobium fredii NGR234] Length = 451 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 147/358 (41%), Positives = 210/358 (58%), Gaps = 5/358 (1%) Query: 70 VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G +S V GR R P GRVI++ +P+DG + ++ + Sbjct: 83 VLLTPIGGLAGLSSRAEVVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKTTEVR-PL 141 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P M R+ VE+ F G+R +D GQRIG++ G GKSTL+S + D Sbjct: 142 HGRAPNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTLISQIVKGAAAD 201 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 VI++L+GERGREVREF+E +LG+ L++++VVV TSD S R A +AEYF Sbjct: 202 VVIVALIGERGREVREFVERHLGEEGLRRAIVVVETSDRSATERAQCAPMATALAEYFRE 261 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G V L+LDS+TRF ++REI +GE P RG+P SVF+ LP LLER G E+ G+I Sbjct: 262 QGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFAALPGLLERAGLGER--GSI 319 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VLV+GD DPIA+ R ILDGHIVL+R+LA +P +D L S SR+ D S Sbjct: 320 TAFYTVLVEGDGTGDPIAEESRGILDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSE 379 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 +K S L+ R+ E + +G Y+ G D + D+AV + + +FL+QS ++S Sbjct: 380 THRKAASFFRDLLARYAECEFLINVGEYKQGGDPLTDRAVASIGELKEFLRQSEDEVS 437 >gi|51246511|ref|YP_066395.1| flagellum-specific ATP synthase (FliI) [Desulfotalea psychrophila LSv54] gi|50877548|emb|CAG37388.1| probable flagellum-specific ATP synthase (FliI) [Desulfotalea psychrophila LSv54] Length = 434 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 153/367 (41%), Positives = 218/367 (59%), Gaps = 12/367 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDG 115 G+V+ V + P+G + G L+ R+ P GRVI+ + P Sbjct: 53 FGEVVGFRDGKVLLMPLGELRGLGAGSLIRVIRQSATMRVGPH--LLGRVIDGMEVP--- 107 Query: 116 DDSLGKGDLSMEI-MSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 D+L +LS E+ + +PP M R + + G+R I+ GQR+G+ AGSG+G Sbjct: 108 QDTLPPPELSEEVELYALPPNPMLRDNICQPIDLGVRAINGLLTCGLGQRMGIMAGSGVG 167 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRK 232 KS LL M A+ D +I+L+GERGREVREFIE LG + L +SV+VV TSD+SP+LR Sbjct: 168 KSVLLGMMAKYAQADINVIALIGERGREVREFIERDLGPEGLARSVIVVVTSDQSPLLRM 227 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A IAE+F +G NVLL++DS+TRFA ++REI GE P +GY SVF+ LP+ Sbjct: 228 RGAFVATAIAEFFCKQGKNVLLMMDSVTRFAMAMREIGLAIGEPPTTKGYTPSVFATLPK 287 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 LLER G K +G+IT + +VLVDGD+ +P+ADSVRSILDGHIVL+R++A + +P +D Sbjct: 288 LLERAG-RFKGQGSITGIYTVLVDGDDMTEPVADSVRSILDGHIVLSRAIAAKNHFPAID 346 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS SR+ S + +L L ++ + E D+ IG Y G + +D A+ ++ Sbjct: 347 ILASASRVMRDIVSPEHIELAGKLRTVLADYREAEDLINIGAYVKGTNKNIDLAIEKIEQ 406 Query: 413 IYDFLKQ 419 FLKQ Sbjct: 407 AKLFLKQ 413 >gi|317406228|gb|EFV86474.1| flagellar biosynthesis ATPase FliI [Achromobacter xylosoxidans C54] Length = 477 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 142/345 (41%), Positives = 207/345 (60%), Gaps = 7/345 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G+P+DG L +L+ + P ++R ++ TG+R I+ + Sbjct: 128 ALLGRVLDGAGRPLDGLGPLTGAELAPLSAQPINP-LSRAPIDTVLDTGVRAINGLLTVG 186 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +SV Sbjct: 187 RGQRMGLFAGSGVGKSVLLGMMARYTKADIIVVGLIGERGREVKEFIEHNLGPEGLARSV 246 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D S +LR A +AE+F +G +VLLI+DS+TR+A + R IA GE P Sbjct: 247 VVAAPADVSALLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQRGIALAIGEPPA 306 Query: 279 ARGYPTSVFSELPRLLERIG---PSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDG 334 +GYP SVF++LP L+ER G P K G+ITA +VL +GD+ DPIADS R+ILDG Sbjct: 307 TKGYPPSVFAKLPTLVERAGMGAPGPNGKAGSITAFYTVLAEGDDQQDPIADSARAILDG 366 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 H+VL+R LAE G YP +D AS+SR + + +V + R++ RD+ +G Sbjct: 367 HVVLSRHLAEAGHYPAIDIEASISRAMTSLITPQQFSVVRRFKQTLSRYQRNRDLIAVGA 426 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS-PSDLSSEDVFQEITKKLQ 438 Y G D LD A+ + P + FL+Q ++ ED +++ + Sbjct: 427 YAAGNDPQLDDAIARYPRLEAFLQQDIGENVGYEDAVEQLRASFE 471 >gi|268589963|ref|ZP_06124184.1| flagellar protein export ATPase FliI [Providencia rettgeri DSM 1131] gi|291314680|gb|EFE55133.1| flagellar protein export ATPase FliI [Providencia rettgeri DSM 1131] Length = 454 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 147/324 (45%), Positives = 203/324 (62%), Gaps = 15/324 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP---PAMN---RQRVEKGFKTGIRVIDIFT 156 GRV++A G P+DG KG L E+ ++ P P +N R + G+R I+ Sbjct: 117 GRVLDAQGNPLDG-----KGPL--EVKTRAPLITPPINPLERTPISNVLDVGVRAINALL 169 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D LK Sbjct: 170 TVGRGQRMGLFAGSGVGKSVLLGMMARFTQADIIVVGLIGERGREVKDFIENILGADGLK 229 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++VVV A +D SP+LR A IAEYF G +VLLI+DS+TR++ + REIA GE Sbjct: 230 RAVVVAAPADVSPLLRMQGASYATRIAEYFRDNGLSVLLIMDSLTRYSMAQREIALAVGE 289 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +GYP SVF++LP L+ER G + K G+ITA +VL +GD+ DPIADS R+ILDGH Sbjct: 290 PPATKGYPPSVFAKLPALVERAG-NGKNGGSITAFYTVLTEGDDQQDPIADSARAILDGH 348 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL+RSLAE G YP +D AS+SR + + + + L ++ RD+ +G Y Sbjct: 349 IVLSRSLAESGHYPAIDIEASISRAMTELIPKEHYRKIQRFKQLTSSYQRNRDLINVGAY 408 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G D +LD A+ P + FL+Q Sbjct: 409 AMGSDPMLDTAIQYYPRMSKFLQQ 432 >gi|307131592|ref|YP_003883608.1| flagellum-specific ATP synthase fliI [Dickeya dadantii 3937] gi|306529121|gb|ADM99051.1| Flagellum-specific ATP synthase fliI [Dickeya dadantii 3937] Length = 456 Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 143/339 (42%), Positives = 202/339 (59%), Gaps = 5/339 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ KP+DG + G + + + P + R +E G+R I+ + Sbjct: 114 ALLGRVLDGSAKPLDGFPAPDTGYTAPLVTAPFNP-LQRTPIEHVLDVGVRAINALLTVG 172 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + L +SV Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGLARSV 232 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPA 292 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 293 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 352 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + V + ++ RD+ +G Y G Sbjct: 353 SRQLAESGHYPAIDIEASISRAMTALIDENHYSAVRQFKQSLSSYQRNRDLINVGAYAAG 412 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D +LD+A+ P + FL+Q + SS F+E + L Sbjct: 413 SDPLLDRAIQLYPQMQHFLQQGMFERSS---FEEACQAL 448 >gi|312967138|ref|ZP_07781356.1| flagellar protein export ATPase FliI [Escherichia coli 2362-75] gi|312288602|gb|EFR16504.1| flagellar protein export ATPase FliI [Escherichia coli 2362-75] Length = 457 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLESYLQQ 434 >gi|229524132|ref|ZP_04413537.1| flagellum-specific ATP synthase FliI [Vibrio cholerae bv. albensis VL426] gi|229337713|gb|EEO02730.1| flagellum-specific ATP synthase FliI [Vibrio cholerae bv. albensis VL426] Length = 439 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 140/321 (43%), Positives = 204/321 (63%), Gaps = 6/321 (1%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI+ +G P+DG + S+ M P + R+ + + GI+ I+ + G Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QRIG+FAGSG+GKS L M R V++ L+GERGREV+ FIE+ LG D ++SVVV Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKAFIEEILGVDGSQRSVVV 219 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P + Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKPGT 398 Query: 400 DLILDKAVHQVPIIYDFLKQS 420 D +D A P + +L+Q+ Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419 >gi|320107025|ref|YP_004182615.1| FliI/YscN family ATPase [Terriglobus saanensis SP1PR4] gi|319925546|gb|ADV82621.1| ATPase, FliI/YscN family [Terriglobus saanensis SP1PR4] Length = 434 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 147/369 (39%), Positives = 221/369 (59%), Gaps = 5/369 (1%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKP 112 K + +VI + P+ I GD V G C GRV++A G+P Sbjct: 49 KGGYHAAEVIGFRGSHLISMPLSSSRGIRFGDRVMTTGEVPSLGVGEDCLGRVLDARGRP 108 Query: 113 IDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 ID + + + + +P AM+R ++ TG+RV+D + GQR+G+F GSG+ Sbjct: 109 ID-ERQAPRVETFRPLDGDLPMAMHRVPIQTPLATGVRVLDAMMTVGRGQRVGIFGGSGV 167 Query: 173 GKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILR 231 GKSTL+ M R+ D I+ LVGERGREVREF+ED LG+ ++SV VV+TSDESP++R Sbjct: 168 GKSTLIGMMTRNTSADLTIVGLVGERGREVREFLEDSLGEKGRRRSVTVVSTSDESPLMR 227 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A L A T+AE +++KG +VLL+LDS+TR+A + RE+ +GE +GY SVF+++ Sbjct: 228 MRAALAATTLAESYAAKGKHVLLVLDSLTRYAMAAREVGLAAGEPAATKGYTPSVFAKMA 287 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RL+ER G G++TA +VL++GD+ DP+ D+ RS+LDGHIVL+R +A G YPPV Sbjct: 288 RLVERAG--NFGTGSMTAFYTVLMEGDDQQDPLVDAARSLLDGHIVLSREMASAGIYPPV 345 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 L S+SRL SA+ ++ + + + + + D+ +G Y+ G+D LD A+ P Sbjct: 346 HVLDSLSRLMPAVISAEHRQDAAKIRRTMATYARSEDMVRLGMYKSGMDAELDHAIRMHP 405 Query: 412 IIYDFLKQS 420 I F +Q+ Sbjct: 406 RIQTFFQQT 414 >gi|119947164|ref|YP_944844.1| ATPase, FliI/YscN family protein [Psychromonas ingrahamii 37] gi|119865768|gb|ABM05245.1| ATPase, FliI/YscN family protein [Psychromonas ingrahamii 37] Length = 436 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 140/345 (40%), Positives = 210/345 (60%), Gaps = 18/345 (5%) Query: 101 WCGRVINALGKPID------GDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 W GRV+NA G+ ID G D++ + ++ I+ K P + + F GI+ I+ Sbjct: 95 WLGRVLNAHGEAIDDLPSPRGIDTITLRSAEAINILKKKP-------ISEPFDVGIKSIN 147 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 L GQR+G+ AGSG+GKS L+ M + D V++ L+GER REVREFIE +G + Sbjct: 148 GLLTLAKGQRVGLVAGSGVGKSVLMGMITKFSEADVVVVGLIGERNREVREFIEKNIGAE 207 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 LKKSVV+ A +D+SP++R A ++AEY+ KG NVLL++DS+TR+A + RE+A + Sbjct: 208 GLKKSVVIAAPADQSPLMRIQATELCHSVAEYYRDKGANVLLLVDSLTRYAMAQREVAIS 267 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GELP +GYP SVFS +P LLER G + G +TA+ ++L +GD DP+ D+ ++IL Sbjct: 268 LGELPAIKGYPPSVFSFIPPLLERSGNGHENAGTMTAIYTILSEGDEDYDPVVDTAKAIL 327 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIVL++ LA+ G++P VD S+SR D S ++ L + + +D+ + Sbjct: 328 DGHIVLSKELAQRGQFPAVDIEKSISRCMDAVVSEPHLQIARQCKRLYSMYNKAKDLIAL 387 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 GGY+ G D LD+A+ + PII L Q+ S F+E ++L Sbjct: 388 GGYQQGNDPELDEAIQKNPIIEKLLMQNTIQYVS---FEESCQQL 429 >gi|332756097|gb|EGJ86450.1| flagellar protein export ATPase FliI [Shigella flexneri 4343-70] Length = 457 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434 >gi|261344123|ref|ZP_05971767.1| flagellar protein export ATPase FliI [Providencia rustigianii DSM 4541] gi|282567715|gb|EFB73250.1| flagellar protein export ATPase FliI [Providencia rustigianii DSM 4541] Length = 454 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 142/318 (44%), Positives = 199/318 (62%), Gaps = 3/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++A G P+DG L + I + P + R + G+R I+ + GQ Sbjct: 117 GRVLDAQGTPLDGKGPLETKARAPLITPPINP-LERTPIHSVLDVGVRAINSLLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG D L+++VVV Sbjct: 176 RMGLFAGSGVGKSVLLGMMARFTQADIIVVGLIGERGREVKDFIENILGADGLRRAVVVA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAEYF +G +VLLI+DS+TR++ + REIA GE P +G Sbjct: 236 APADVSPLLRMQGASYATRIAEYFRDQGKSVLLIMDSLTRYSMAQREIALAVGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G + K G+ITA +VL +GD+ DPIADS R+ILDGHIVL+RS Sbjct: 296 YPPSVFAKLPALVERAG-NGKNGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRS 354 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + + + + L ++ RD+ +G Y G D Sbjct: 355 LAESGHYPAIDIEASISRAMTDLIAKEHYRKIQRFKQLTSSYQRNRDLINVGAYAMGSDP 414 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LD A+ P + FL+Q Sbjct: 415 MLDTAIQYYPRMSKFLQQ 432 >gi|254517010|ref|ZP_05129068.1| flagellar protein export ATPase FliI [gamma proteobacterium NOR5-3] gi|219674515|gb|EED30883.1| flagellar protein export ATPase FliI [gamma proteobacterium NOR5-3] Length = 456 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 138/318 (43%), Positives = 199/318 (62%), Gaps = 4/318 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ G+ +DG + + + +K ++R+ + + G+R I+ F + GQ Sbjct: 113 GRVIDGAGRFLDGGPA-PHCSHRVALRAKALNPLDRRPIREPLDVGVRAINGFLTMGKGQ 171 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVV 221 R+G+FAGSG+GKSTLL M R D +++ LVGERGREVREFIED LG L +++VV Sbjct: 172 RLGLFAGSGVGKSTLLGMMTRHTEADVIVVGLVGERGREVREFIEDILGPAGLARAIVVA 231 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +D P++R A IAE+F +G +VLL++DS+TRFA + REI GE PV++G Sbjct: 232 TPADYPPLMRVHGAWRATAIAEHFRDQGRDVLLLMDSLTRFAQAQREIGLAVGEPPVSKG 291 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVFS LP L+ER G G+ITAV +VLV+GD+HNDPIAD+ R+ILDGHIVL+R Sbjct: 292 YPPSVFSLLPNLVERAG--NGPTGSITAVYTVLVEGDDHNDPIADAARAILDGHIVLSRQ 349 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G +P +D ASVSR +++L +L L + + RD+ IG Y G D Sbjct: 350 VADSGLFPAIDLEASVSRAMPSIAQESQQELARALKELYSVYRQNRDLISIGAYEHGSDP 409 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +D+A+ + ++Q Sbjct: 410 KIDQALRAHEPLRQLIRQ 427 >gi|218705434|ref|YP_002412953.1| flagellum-specific ATP synthase [Escherichia coli UMN026] gi|293405424|ref|ZP_06649416.1| fliI [Escherichia coli FVEC1412] gi|298381068|ref|ZP_06990667.1| fliI [Escherichia coli FVEC1302] gi|300899198|ref|ZP_07117474.1| flagellar protein export ATPase FliI [Escherichia coli MS 198-1] gi|218432531|emb|CAR13424.1| flagellum-specific ATP synthase [Escherichia coli UMN026] gi|291427632|gb|EFF00659.1| fliI [Escherichia coli FVEC1412] gi|298278510|gb|EFI20024.1| fliI [Escherichia coli FVEC1302] gi|300357179|gb|EFJ73049.1| flagellar protein export ATPase FliI [Escherichia coli MS 198-1] Length = 457 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434 >gi|242238984|ref|YP_002987165.1| ATPase, FliI/YscN family [Dickeya dadantii Ech703] gi|242131041|gb|ACS85343.1| ATPase, FliI/YscN family [Dickeya dadantii Ech703] Length = 454 Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 140/332 (42%), Positives = 194/332 (58%), Gaps = 6/332 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTP 157 GR+++ GKP+DG L + PP + R ++ G+R I+ Sbjct: 114 SLLGRILDGAGKPLDG---LPLPETGYRASLTTPPFNPLQRTPIDHVLDVGVRAINALLT 170 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + + Sbjct: 171 VGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAEGRSR 230 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 SVV+ A +D SP+LR A IAE F KG +VLLI+DS+TR+A + REIA GE Sbjct: 231 SVVIAAPADVSPLLRMQGAAYATRIAEDFRDKGYHVLLIMDSLTRYAMAQREIALAIGEP 290 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P +GYP SVF++LP L+ER G G+IT +VL +GD+ DPIADS R+ILDGHI Sbjct: 291 PATKGYPPSVFAKLPALVERAGNGIHGGGSITGFYTVLTEGDDQQDPIADSARAILDGHI 350 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LAE G YP +D AS+SR V L+ ++ +D+ +G Y Sbjct: 351 VLSRQLAESGHYPAIDIEASISRAMTSLIDESHYAKVRQFKQLLSVYQRNKDLISVGAYA 410 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 G D +LDKA+ P + FL+Q + ED Sbjct: 411 AGSDPLLDKAIKLYPRMESFLQQGMYERCDED 442 >gi|24113316|ref|NP_707826.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 301] gi|26248210|ref|NP_754250.1| flagellum-specific ATP synthase [Escherichia coli CFT073] gi|30063381|ref|NP_837552.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 2457T] gi|110642047|ref|YP_669777.1| flagellum-specific ATP synthase [Escherichia coli 536] gi|227885630|ref|ZP_04003435.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972] gi|300975545|ref|ZP_07173056.1| flagellar protein export ATPase FliI [Escherichia coli MS 45-1] gi|301050699|ref|ZP_07197560.1| flagellar protein export ATPase FliI [Escherichia coli MS 185-1] gi|306814236|ref|ZP_07448402.1| flagellum-specific ATP synthase [Escherichia coli NC101] gi|331657987|ref|ZP_08358949.1| flagellar protein export ATPase FliI [Escherichia coli TA206] gi|26108614|gb|AAN80817.1|AE016762_70 Flagellum-specific ATP synthase [Escherichia coli CFT073] gi|24052326|gb|AAN43533.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 301] gi|30041633|gb|AAP17361.1| flagellum-specific ATP synthase [Shigella flexneri 2a str. 2457T] gi|110343639|gb|ABG69876.1| flagellum-specific ATP synthase [Escherichia coli 536] gi|227837203|gb|EEJ47669.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972] gi|281601381|gb|ADA74365.1| Flagellum-specific ATP synthase [Shigella flexneri 2002017] gi|300297622|gb|EFJ54007.1| flagellar protein export ATPase FliI [Escherichia coli MS 185-1] gi|300410314|gb|EFJ93852.1| flagellar protein export ATPase FliI [Escherichia coli MS 45-1] gi|305852395|gb|EFM52846.1| flagellum-specific ATP synthase [Escherichia coli NC101] gi|307553954|gb|ADN46729.1| flagellum-specific ATP synthase [Escherichia coli ABU 83972] gi|313650163|gb|EFS14576.1| flagellar protein export ATPase FliI [Shigella flexneri 2a str. 2457T] gi|315290258|gb|EFU49636.1| flagellar protein export ATPase FliI [Escherichia coli MS 153-1] gi|320194346|gb|EFW68977.1| Flagellum-specific ATP synthase FliI [Escherichia coli WV_060327] gi|324005860|gb|EGB75079.1| flagellar protein export ATPase FliI [Escherichia coli MS 57-2] gi|331056235|gb|EGI28244.1| flagellar protein export ATPase FliI [Escherichia coli TA206] gi|332757288|gb|EGJ87625.1| flagellar protein export ATPase FliI [Shigella flexneri 2747-71] gi|332757507|gb|EGJ87842.1| flagellar protein export ATPase FliI [Shigella flexneri K-671] gi|332766679|gb|EGJ96883.1| flagellar protein export ATPase FliI [Shigella flexneri 2930-71] gi|333003314|gb|EGK22860.1| flagellar protein export ATPase FliI [Shigella flexneri K-218] gi|333017583|gb|EGK36895.1| flagellar protein export ATPase FliI [Shigella flexneri K-304] Length = 457 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434 >gi|110805911|ref|YP_689431.1| flagellum-specific ATP synthase [Shigella flexneri 5 str. 8401] gi|110615459|gb|ABF04126.1| flagellum-specific ATP synthase [Shigella flexneri 5 str. 8401] Length = 457 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQHNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434 >gi|333004045|gb|EGK23579.1| flagellar protein export ATPase FliI [Shigella flexneri K-272] gi|333017818|gb|EGK37125.1| flagellar protein export ATPase FliI [Shigella flexneri K-227] Length = 457 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434 >gi|183598651|ref|ZP_02960144.1| hypothetical protein PROSTU_02057 [Providencia stuartii ATCC 25827] gi|188020836|gb|EDU58876.1| hypothetical protein PROSTU_02057 [Providencia stuartii ATCC 25827] Length = 454 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 142/318 (44%), Positives = 197/318 (61%), Gaps = 3/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++A G P+DG L + I + P + R + G+R I+ + GQ Sbjct: 117 GRILDAQGTPLDGKGPLDAKQRAPLITPPINP-LERTPIHSVLDVGVRAINALLTVGRGQ 175 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + LK++VVV Sbjct: 176 RMGLFAGSGVGKSVLLGMMARFTQADIIVVGLIGERGREVKDFIENILGAEGLKRAVVVA 235 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP+LR A IAEYF G NVLLI+DS+TR++ + REIA GE P +G Sbjct: 236 APADVSPLLRMQGASYATRIAEYFRDLGKNVLLIMDSLTRYSMAQREIALAIGEPPATKG 295 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G + K G+ITA +VL +GD+ DPIADS R+ILDGHIVL+RS Sbjct: 296 YPPSVFAKLPALVERAG-NGKNGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRS 354 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D AS+SR + + + L ++ RD+ +G Y G D Sbjct: 355 LAESGHYPAIDIEASISRAMTELIDKQHYRQIQRFKQLTSSYQRNRDLINVGAYATGSDP 414 Query: 402 ILDKAVHQVPIIYDFLKQ 419 +LD A+ P + FL+Q Sbjct: 415 LLDMAIQYYPRMSKFLQQ 432 >gi|315296475|gb|EFU55772.1| flagellar protein export ATPase FliI [Escherichia coli MS 16-3] Length = 457 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434 >gi|121608101|ref|YP_995908.1| flagellar protein export ATPase FliI [Verminephrobacter eiseniae EF01-2] gi|121552741|gb|ABM56890.1| flagellar protein export ATPase FliI [Verminephrobacter eiseniae EF01-2] Length = 470 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 138/330 (41%), Positives = 200/330 (60%), Gaps = 2/330 (0%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GRV++A G P+D + L+ ++ AM R V + TG+R Sbjct: 115 GVLRLPMGNGLLGRVVDAQGLPLDHRGPVQDTVLAPMARDRIN-AMERDPVRQPLDTGVR 173 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 I+ + GQR+G+ AGSG+GKS LL M AR D +++ L+GERGREV+EF+ED L Sbjct: 174 AINALLTVGRGQRLGLLAGSGVGKSVLLGMMARYTGADVIVVGLIGERGREVKEFVEDIL 233 Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G D +SVVV A +D P+LR A +AE+F +G +VLL+LDS+TR+A + REI Sbjct: 234 GADGRARSVVVAAPADAPPLLRMQGASYATAVAEHFRDQGRHVLLLLDSLTRYAMAQREI 293 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 A GE P +GYP S F+ LP+L+ER G + +G+ITA +VL +GD+ +DP+AD+ R Sbjct: 294 ALAIGEPPATKGYPPSCFARLPQLVERSGNGLQGQGSITAFHTVLTEGDDPHDPVADAAR 353 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 +ILDGHIVL+R+LAE G +P +D S SR+ + +L L R+++ RD+ Sbjct: 354 AILDGHIVLSRALAEAGHFPAIDIEQSSSRVMHRLVPDRHLELARRFRALYSRYQKGRDL 413 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +G Y G D LD+A+ P + FL+Q Sbjct: 414 LQVGAYASGSDPALDEAIRLQPQMAQFLQQ 443 >gi|94968677|ref|YP_590725.1| ATPase FliI/YscN [Candidatus Koribacter versatilis Ellin345] gi|94550727|gb|ABF40651.1| type III secretion system ATPase, FliI/YscN [Candidatus Koribacter versatilis Ellin345] Length = 437 Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 143/326 (43%), Positives = 210/326 (64%), Gaps = 6/326 (1%) Query: 103 GRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++A G P+DG + +G ++ + +P A R V + GIR ID F G Sbjct: 102 GRVLDATGAPLDGITPARPRGSRPVDGSAPLPYA--RIPVREVMPCGIRAIDGFVTCGRG 159 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QRIG+F GSG+GKSTL+ M R D +++L+GERGREVREF+E+ +G+ ++++VV+ Sbjct: 160 QRIGIFGGSGVGKSTLIGMLTRGSAADVTVLALIGERGREVREFVEESIGEEGMQRAVVI 219 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 V+TSD+SP+LR A + A +AE+F+++G +VLL+LDS+TRF + REI +GE P A+ Sbjct: 220 VSTSDQSPLLRLRAAMAATAVAEHFAAEGKHVLLVLDSLTRFGMAQREIGLAAGEPPTAK 279 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GY SVF+ L RL+ER G E+G+IT +VL++GD+ DP+ D+VRS+LDGHIVL+R Sbjct: 280 GYTPSVFTLLARLVERAG--NFERGSITGFYTVLMEGDDLQDPLVDAVRSLLDGHIVLDR 337 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LA +G YPP+ L S+SRLA S + L + + + D+ IG Y+ G D Sbjct: 338 KLASDGHYPPIQILESLSRLASAVCSVQHLQASRKLRAWLASYVRSEDLIRIGAYQRGGD 397 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSS 426 +LD+AV +P I L Q + +S Sbjct: 398 PVLDQAVSAMPEIRKLLIQGALERTS 423 >gi|46562141|ref|YP_009159.1| type III secretion system ATPase [Desulfovibrio vulgaris str. Hildenborough] gi|120586842|ref|YP_961187.1| type III secretion system ATPase [Desulfovibrio vulgaris subsp. vulgaris DP4] gi|46447678|gb|AAS94344.1| type III secretion system ATPase [Desulfovibrio vulgaris str. Hildenborough] gi|120564256|gb|ABM29999.1| type III secretion system ATPase, FliI/YscN [Desulfovibrio vulgaris DP4] gi|311235508|gb|ADP88361.1| type III secretion apparatus H+-transporting two-sector ATPase [Desulfovibrio vulgaris RCH1] Length = 438 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 145/327 (44%), Positives = 202/327 (61%), Gaps = 4/327 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG PIDG L K + + P M R+ +++ G+RV+D GQ Sbjct: 104 GRVLDGLGDPIDGGPPL-KPRTRYPVYADPPNPMTRRIIDRPISLGLRVLDGVLTCGEGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+FA +G GKSTLLS + D +++L+GERGREVREFIE LG + KK+V+VV Sbjct: 163 RMGIFAAAGGGKSTLLSSIIKGCSADVCVLALIGERGREVREFIEHDLGPEGRKKAVLVV 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +TSD S + R A TA IAEYF + +VLL++DS+TRF + REI +GE P RG Sbjct: 223 STSDRSSMERLKAAYTATAIAEYFRDQRRSVLLMMDSVTRFGRAQREIGLAAGEPPTRRG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVFS LPRL+ER G S++ G+ITA+ +VLV+GD+ +PIAD RSILDGHIVL+R Sbjct: 283 FPPSVFSTLPRLMERAGNSDR--GSITALYTVLVEGDDMTEPIADETRSILDGHIVLSRK 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA YP +D ASVSR+ + + K L ++ ++ E + IG Y+ G D Sbjct: 341 LAAANHYPAIDVQASVSRVMNAIVGKEHKGAAQKLRKILAKYAEVELLVQIGEYKKGSDK 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSED 428 D A+ +V + FL+Q + S+ D Sbjct: 401 EADDALARVGAVNAFLRQGLDERSTFD 427 >gi|238752875|ref|ZP_04614340.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380] gi|238708914|gb|EEQ01167.1| Flagellum-specific ATP synthase [Yersinia rohdei ATCC 43380] Length = 439 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 148/373 (39%), Positives = 212/373 (56%), Gaps = 11/373 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDD 117 QV+ + ++ Y+ P + + G VF G I S W GRV+N LG+PID Sbjct: 57 QVVGFDREVTYLMPFKQPDGLIGGARVFPSYLDGELMIGDS--WLGRVVNGLGEPIDDKG 114 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + + ++ P + RQ V G++ I+ + GQR+G+ AGSG+GKS L Sbjct: 115 PLSGDTPLQQQLPQIHP-LQRQPVSAPLDVGVKAINGLLTIGKGQRVGLMAGSGVGKSML 173 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPL 236 L M R D V++ L+GERGREV+EFIE L + KSVV+ A +DESP++R A Sbjct: 174 LGMMTRYTQADVVVVGLIGERGREVKEFIEHSLQASGMAKSVVIAAPADESPLMRIKATE 233 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +IA Y+ KG +VLL++DS+TR+A + REIA + GE P +GYP S FS +PRL E Sbjct: 234 LCHSIATYYRDKGKDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAES 293 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G S G +TA+ +VL +GD+ DPI D R++LDGHIVL R LAE G YP +D S Sbjct: 294 AGNSSG-SGTMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLAEAGHYPAIDISQS 352 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR ++ ++ L + E + + +GGY G D +D+AV P I DF Sbjct: 353 ISRCMNQISPDNQILSARFLKQCYADYMEIKPLIPLGGYVAGADPRVDQAVQYHPAIIDF 412 Query: 417 LKQ---SPSDLSS 426 L+Q P+ L++ Sbjct: 413 LRQEVSQPATLAA 425 >gi|312884909|ref|ZP_07744599.1| flagellum-specific ATP synthase [Vibrio caribbenthicus ATCC BAA-2122] gi|309367386|gb|EFP94948.1| flagellum-specific ATP synthase [Vibrio caribbenthicus ATCC BAA-2122] Length = 441 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 139/331 (41%), Positives = 204/331 (61%), Gaps = 11/331 (3%) Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ +G P+DG LG D S+ + R+ + GI+ I+ + Sbjct: 102 GRVIDGVGNPLDG---LGPIYTDKHASFNSEPINPLTRKPITAPLDVGIKAINGLLTVGK 158 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQRIG+FAGSG+GKS L M R V++ L+GERGREV+EFI++ LG D ++SVV Sbjct: 159 GQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIDEILGVDGRQRSVV 218 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R TA+T+AE+F +G +VLL++DS+TRFA + REIA + GE P Sbjct: 219 VAAPADASPLMRLKGCQTALTVAEFFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPAT 278 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+ Sbjct: 279 KGYPPSVFAKLPALVERAGNGSDTQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 338 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R +A+ G YP +D SVSR+ + S ++ + ++ ++ + D+ IG Y+PG Sbjct: 339 REMADSGHYPAIDVEKSVSRVMPQIVSEEQLLMSKAVRQVLSICRKNHDLVSIGAYKPGS 398 Query: 400 DLILDKAVHQVPIIYDFLKQS-----PSDLS 425 D +D A P + +L+Q P D+S Sbjct: 399 DAAIDSAFTLKPSLDTYLQQEMKESVPFDMS 429 >gi|52631924|gb|AAU85374.1| putative ATPase [Sinorhizobium fredii] Length = 451 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 146/358 (40%), Positives = 210/358 (58%), Gaps = 5/358 (1%) Query: 70 VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V + P+G +S V GR R P GRVI++ +P+DG + ++ + Sbjct: 83 VLLTPIGGLAGLSSRAEVVSTGRMREVPIGPDLLGRVIDSRCRPLDGKGEVKTTEVR-PL 141 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P M R+ VE+ F G+R +D GQRIG++ G GKSTL+S + D Sbjct: 142 HGRAPNPMTRRMVERPFPLGVRALDGLLTCGEGQRIGIYGEPGGGKSTLISQIVKGAAAD 201 Query: 189 KVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 VI++L+GERGREVREF+E +LG+ L++++VVV TSD S R A +AEYF Sbjct: 202 VVIVALIGERGREVREFVERHLGEEGLRRAIVVVETSDRSATERAQCAPMATALAEYFRE 261 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G V L+LDS+TRF ++REI +GE P RG+P SVF+ LP LLER G E+ G+I Sbjct: 262 QGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRGFPPSVFAALPGLLERAGMGER--GSI 319 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VLV+GD DPIA+ R I+DGHIVL+R+LA +P +D L S SR+ D S Sbjct: 320 TAFYTVLVEGDGTGDPIAEESRGIVDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSE 379 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 +K S L+ R+ E + +G Y+ G D + D+AV + + +FL+QS ++S Sbjct: 380 THRKAASFFRDLLARYAECEFLINVGEYKQGGDPLTDRAVASIGELKEFLRQSEDEVS 437 >gi|149188088|ref|ZP_01866383.1| flagellum-specific ATP synthase [Vibrio shilonii AK1] gi|148838076|gb|EDL55018.1| flagellum-specific ATP synthase [Vibrio shilonii AK1] Length = 440 Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 209/338 (61%), Gaps = 6/338 (1%) Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ +G P+DG LG+ D ++ + R+ + + G++ I+ + Sbjct: 102 GRVIDGVGNPLDG---LGEIYTDKRASFNAEPINPLARKPISEPLDVGLKAINGLLTVGK 158 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219 GQRIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG + + +SVV Sbjct: 159 GQRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGTSGRERSVV 218 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P Sbjct: 219 VAAPADASPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPAT 278 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G + +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+ Sbjct: 279 KGYPPSVFAKLPALVERAGNGDVNQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLS 338 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R +A+ G YP +D SVSR+ + + ++ ++ + +D+ IG Y+PG Sbjct: 339 REMADAGHYPAIDVEKSVSRVMPQITDDQHVLMSKAVRQVLSVCRKNQDLVSIGAYKPGT 398 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 D +D A P + +L+QS + D+ + K+L Sbjct: 399 DPAIDSAFTLKPKLDQYLQQSMRETVPYDMCLGMLKQL 436 >gi|300994274|ref|ZP_07180826.1| flagellar protein export ATPase FliI [Escherichia coli MS 200-1] gi|300304939|gb|EFJ59459.1| flagellar protein export ATPase FliI [Escherichia coli MS 200-1] Length = 457 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 145/326 (44%), Positives = 197/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMRGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434 >gi|301644600|ref|ZP_07244589.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1] gi|301077075|gb|EFK91881.1| flagellar protein export ATPase FliI [Escherichia coli MS 146-1] Length = 457 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 142/321 (44%), Positives = 194/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+ I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVHPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|260772326|ref|ZP_05881242.1| flagellum-specific ATP synthase FliI [Vibrio metschnikovii CIP 69.14] gi|260611465|gb|EEX36668.1| flagellum-specific ATP synthase FliI [Vibrio metschnikovii CIP 69.14] Length = 440 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 137/319 (42%), Positives = 202/319 (63%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQQATFNAQPINPLL-RKPITEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D +++VVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRAVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+ IAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALAIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGPNQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHMLMSRAVRQILSICRKNQDLVSIGAYKPGTD 399 Query: 401 LILDKAVHQVPIIYDFLKQ 419 +D A P + +L+Q Sbjct: 400 KAIDSAFTLKPRLDQYLQQ 418 >gi|251772441|gb|EES53008.1| flagellar protein export ATPase FliI [Leptospirillum ferrodiazotrophum] Length = 457 Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 141/347 (40%), Positives = 220/347 (63%), Gaps = 7/347 (2%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 RISP W GRV++ LG+P+DG L G + + + + + R+R+E+ +R I+ Sbjct: 106 RISPH--WLGRVLDPLGRPMDGR-PLPPGTVEVPLRGRPLNPLLRRRIERPLDLSVRSIN 162 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 + GQ+IG+FAG G+GKSTL+ M AR+ D +I+L+GERGREVREF+E LG + Sbjct: 163 ALATVGEGQKIGIFAGPGVGKSTLMGMMARNASVDVNVIALIGERGREVREFLERDLGPE 222 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L ++V+VVAT + P+L+ A A+ IAE F +G NVL ++DS+TR+A ++REI Sbjct: 223 GLSRTVLVVATGELPPLLKTRATHFAMAIAEMFRDRGQNVLFMMDSLTRYAGALREIGLA 282 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSI 331 +GE P ARG+ SVF++LPRL+ER G +E G+IT + +VLV+G++ +DP+++++ +I Sbjct: 283 TGEPPSARGFTPSVFAQLPRLVERAGCAEG-PGSITGIYTVLVEGEDLPDDPLSEALTAI 341 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHI L+R+LA EG +P V+P+ S+SR+ D + L L + + D+ Sbjct: 342 LDGHIHLSRTLAHEGVFPAVEPMGSLSRVMADIVDEDRQVLAREWRRLYGLYRRSEDLIR 401 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITKKL 437 IG Y G D LD+AV + FL+Q + + E+ F+++ + L Sbjct: 402 IGAYVAGGDPELDRAVRLHESMTGFLRQGREERVGLEEAFEDLARSL 448 >gi|332526226|ref|ZP_08402359.1| type III secretion system ATPase [Rubrivivax benzoatilyticus JA2] gi|332110064|gb|EGJ10692.1| type III secretion system ATPase [Rubrivivax benzoatilyticus JA2] Length = 442 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 154/365 (42%), Positives = 226/365 (61%), Gaps = 5/365 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + P+G ++LG ++ + R+ GRV++A G+P+DG SL Sbjct: 65 EVVGLADGCAMLAPLGELRGVALGAEVELLEQQARVPCGRGLLGRVLDAFGEPLDGR-SL 123 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G + + P + R+ V++ TG+R ID+ + GQR+GVFA +G GKSTLL+ Sbjct: 124 PPGLAGWPLRNASPNPLARRPVDQALATGVRAIDLALTVGVGQRVGVFAMAGGGKSTLLA 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M AR D +I+LVGERGREVREFI+D LG + L +SVVVVATSD + R A TA Sbjct: 184 MLARGAQADLNVIALVGERGREVREFIDDSLGAEGLARSVVVVATSDRPAMERARAAETA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAE F + G +VLL++DS+TR+A ++REI + GE V RGYP SVF+ELPRL ER G Sbjct: 244 TAIAEGFRAGGAHVLLMMDSVTRYARALREIGLSVGEPAVRRGYPPSVFAELPRLFERAG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 +G ITA +VL + ++ +DP+A+ VRSILDGH+VL+R+L G YP +D LAS S Sbjct: 304 --HDAQGAITAFYTVLAEDEDGSDPVAEEVRSILDGHVVLSRALGAAGHYPAIDLLASAS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + +A + L L+ R E R + +G Y+ G D + D+A+ ++P + L+ Sbjct: 362 RVFPRVTAAAHQAAARELRALLARHAEIRFLLQVGEYQAGSDALADRAIERMPRLEALLR 421 Query: 419 QSPSD 423 Q+P + Sbjct: 422 QAPDE 426 >gi|116619484|ref|YP_821640.1| FliI/YscN family ATPase [Candidatus Solibacter usitatus Ellin6076] gi|116222646|gb|ABJ81355.1| ATPase, FliI/YscN family [Candidatus Solibacter usitatus Ellin6076] Length = 449 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 150/380 (39%), Positives = 216/380 (56%), Gaps = 6/380 (1%) Query: 43 VCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGRFRISPSAC 100 V +GDF V QVI V P+ + + LGD L R+ Sbjct: 39 VAIGDFCEVKTASGRRIHTQVIGFRDGRVLSMPLEEIDGLQLGDPLAARSEDARVEVGPG 98 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ GKP+D ++ + S + ++RQ + + TGIR ID P Sbjct: 99 LLGRVIDGFGKPMDTGPAINARE-SYSLHGTPTNPLDRQHITQPLVTGIRAIDALLPCGK 157 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQRIG+F GSG+GKSTLL +R++ D +I+++GER REVR F+E+ LG + K+SVV Sbjct: 158 GQRIGIFGGSGVGKSTLLGSMSRNNSADVTVIAMIGERNREVRGFLENELGPEGRKRSVV 217 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATS+ LR A ++ IAEYF +G NVLL++DS+TR A + REI +GE P Sbjct: 218 VCATSERPAPLRVRACFVSLAIAEYFRDQGANVLLVMDSVTRLAMAQREIGLAAGEPPSQ 277 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GY SVF+ LP++LER G +G+IT +VLV+GD+ N+PI D+VR ILDGH +L+ Sbjct: 278 KGYTPSVFNLLPKVLERAG--NFGRGSITGFFTVLVEGDDFNEPICDAVRGILDGHFILS 335 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R L +G YP +D L SVSRL + +K+ + + + + D+ +G Y G Sbjct: 336 RDLGAQGHYPAIDILHSVSRLTSAIATPAQKEAARKIRAALAAYRDAEDLIQLGAYVSGS 395 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 + LD ++H P + DFL+Q Sbjct: 396 NPDLDASIHLRPELLDFLRQ 415 >gi|311086391|gb|ADP66472.1| flagellum-specific ATP synthase [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311086971|gb|ADP67051.1| flagellum-specific ATP synthase [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087547|gb|ADP67626.1| flagellum-specific ATP synthase [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 463 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 135/325 (41%), Positives = 203/325 (62%), Gaps = 2/325 (0%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+P+D + S + P +NR + + TGIR I+ + G Sbjct: 126 LGRVLDGRGQPLDQLPKIDHKYYSTIKNYSINP-LNRTPITEVLDTGIRAINGLLTIGRG 184 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 Q+IG+F+ SGIGKS LL M AR D ++I+L+GERGREV++FIE+ LG L +SV++ Sbjct: 185 QKIGIFSSSGIGKSILLGMIARYTQADIIVIALIGERGREVKDFIENILGLAGLSRSVII 244 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+L+ A A IAEYF +VLLI+DS+TR+A + REI+ + GELPV++ Sbjct: 245 AAPADVSPLLKIKAASYATNIAEYFYKNNKHVLLIMDSLTRYAMAQREISLSLGELPVSK 304 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP+S+FS++P L+ER G K KG+IT+ +VL +G++ DP++ RS+LDGHI+L+R Sbjct: 305 GYPSSIFSKIPNLIERTGIFNKNKGSITSFYTVLTEGEDEQDPVSHLARSVLDGHIMLSR 364 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 A+ G YP +D +S+SR+ +A + L+ ++ RD+ IG Y G D Sbjct: 365 YYADLGHYPAIDIESSISRVMPNIINAKQYSQAFYFKKLVASYQRNRDLINIGAYVSGTD 424 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLS 425 +ILD A+ P + FL+Q S+ S Sbjct: 425 VILDHAIKIWPKLEKFLQQEISEKS 449 >gi|257471130|ref|ZP_05635129.1| flagellum-specific ATP synthase [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|311085818|gb|ADP65900.1| flagellum-specific ATP synthase [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] Length = 453 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 135/325 (41%), Positives = 203/325 (62%), Gaps = 2/325 (0%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+P+D + S + P +NR + + TGIR I+ + G Sbjct: 116 LGRVLDGRGQPLDQLPKIDHKYYSTIKNYSINP-LNRTPITEVLDTGIRAINGLLTIGRG 174 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 Q+IG+F+ SGIGKS LL M AR D ++I+L+GERGREV++FIE+ LG L +SV++ Sbjct: 175 QKIGIFSSSGIGKSILLGMIARYTQADIIVIALIGERGREVKDFIENILGLAGLSRSVII 234 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+L+ A A IAEYF +VLLI+DS+TR+A + REI+ + GELPV++ Sbjct: 235 AAPADVSPLLKIKAASYATNIAEYFYKNNKHVLLIMDSLTRYAMAQREISLSLGELPVSK 294 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP+S+FS++P L+ER G K KG+IT+ +VL +G++ DP++ RS+LDGHI+L+R Sbjct: 295 GYPSSIFSKIPNLIERTGIFNKNKGSITSFYTVLTEGEDEQDPVSHLARSVLDGHIMLSR 354 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 A+ G YP +D +S+SR+ +A + L+ ++ RD+ IG Y G D Sbjct: 355 YYADLGHYPAIDIESSISRVMPNIINAKQYSQAFYFKKLVASYQRNRDLINIGAYVSGTD 414 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLS 425 +ILD A+ P + FL+Q S+ S Sbjct: 415 VILDHAIKIWPKLEKFLQQEISEKS 439 >gi|74317109|ref|YP_314849.1| flagella ATPase FliI [Thiobacillus denitrificans ATCC 25259] gi|74056604|gb|AAZ97044.1| flagella ATPase FliI [Thiobacillus denitrificans ATCC 25259] Length = 464 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 139/338 (41%), Positives = 208/338 (61%), Gaps = 10/338 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GRV++ G+P+DG G LS+E + S+ + R + + G+R I+ Sbjct: 125 SLLGRVLDGAGRPLDG-----IGPLSLERRVPLYSRPINPLERAPIRETLDVGVRAINGL 179 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNL 214 + GQR+G+FAGSG+GKS LL M AR D V++ L+GERGREV+EFI+ LG + + Sbjct: 180 LTVGRGQRLGLFAGSGVGKSVLLGMMARMTEADVVVVGLIGERGREVKEFIDRILGAEGM 239 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 ++VVV A +D P++R A++IAEYF +G +VLLI+DS+TR+A + RE+A G Sbjct: 240 ARAVVVAAPADHPPLMRLNGAAYAMSIAEYFRDQGKHVLLIMDSLTRYAMAQREVALAIG 299 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E P +GYP SVF++LP+L ER G G+ITA +VL++GD+ DPIAD+ R+ILDG Sbjct: 300 EPPATKGYPPSVFAKLPQLAERAGNGRSGSGSITAFFTVLMEGDDQQDPIADAARAILDG 359 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+R LA+ G YP +D AS+SR + + + +L R+ +RD+ +G Sbjct: 360 HIVLSRDLADAGHYPAIDIEASISRAQPDLLTEEALERTRRFKYLYSRYMRSRDLLAVGA 419 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 Y PG D++LD+ V P + +L Q + +S D ++ Sbjct: 420 YVPGADVVLDEGVRLYPRMQGYLMQGMREQASLDAARD 457 >gi|15616698|ref|NP_239910.1| flagellum-specific ATP synthase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681455|ref|YP_002467840.1| flagellum-specific ATP synthase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219682011|ref|YP_002468395.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|11386785|sp|P57178|FLII_BUCAI RecName: Full=Flagellum-specific ATP synthase gi|25290463|pir||D84938 H+-transporting two-sector ATPase (EC 3.6.3.14), flagellum-specific [imported] - Buchnera sp. (strain APS) gi|10038761|dbj|BAB12796.1| flagellum-specific ATP synthase [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621744|gb|ACL29900.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624298|gb|ACL30453.1| flagellum-specific ATP synthase [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 467 Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 135/325 (41%), Positives = 203/325 (62%), Gaps = 2/325 (0%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+P+D + S + P +NR + + TGIR I+ + G Sbjct: 130 LGRVLDGRGQPLDQLPKIDHKYYSTIKNYSINP-LNRTPITEVLDTGIRAINGLLTIGRG 188 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 Q+IG+F+ SGIGKS LL M AR D ++I+L+GERGREV++FIE+ LG L +SV++ Sbjct: 189 QKIGIFSSSGIGKSILLGMIARYTQADIIVIALIGERGREVKDFIENILGLAGLSRSVII 248 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+L+ A A IAEYF +VLLI+DS+TR+A + REI+ + GELPV++ Sbjct: 249 AAPADVSPLLKIKAASYATNIAEYFYKNNKHVLLIMDSLTRYAMAQREISLSLGELPVSK 308 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP+S+FS++P L+ER G K KG+IT+ +VL +G++ DP++ RS+LDGHI+L+R Sbjct: 309 GYPSSIFSKIPNLIERTGIFNKNKGSITSFYTVLTEGEDEQDPVSHLARSVLDGHIMLSR 368 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 A+ G YP +D +S+SR+ +A + L+ ++ RD+ IG Y G D Sbjct: 369 YYADLGHYPAIDIESSISRVMPNIINAKQYSQAFYFKKLVASYQRNRDLINIGAYVSGTD 428 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLS 425 +ILD A+ P + FL+Q S+ S Sbjct: 429 VILDHAIKIWPKLEKFLQQEISEKS 453 >gi|76574801|gb|ABA47275.1| HrcN [Pseudomonas cichorii] Length = 451 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 145/340 (42%), Positives = 206/340 (60%), Gaps = 10/340 (2%) Query: 103 GRVINALGKPIDGDD----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 G V++ G+ + GD +L + ++ PPA R R+E TG+R ID L Sbjct: 108 GSVLDGFGRSLSGDGPSAFALSGAAGAQPVIRDAPPATERPRIEAPLSTGLRAIDGLLTL 167 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217 GQR+G+FAG+G GK+TLL+ AR+ + ++ L+GERGRE+REF++ L + L+ ++ Sbjct: 168 GEGQRVGLFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRSRT 227 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 V+V +TSD S + R A TA TIAE F +G + LLI+DS+TRFA + REI SGE P Sbjct: 228 VLVCSTSDRSSMERARAAFTATTIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGE-P 286 Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 RG P SV+S LPRL+ER G G ITA+ SVL++ D+ NDP+AD VRS+LDGHI Sbjct: 287 AGRGGLPPSVYSLLPRLVERAG--RTRTGAITALYSVLIEQDSMNDPVADEVRSLLDGHI 344 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LAE G YP VD L S+SR ++ K + + L+ +++ + +G Y+ Sbjct: 345 VLSRRLAERGHYPAVDILTSLSRTMSNVVGTEQVKGATQIRRLLAAYQQVEMLIKLGEYQ 404 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITK 435 G D + D AV I DFL+QS D +S ED + + Sbjct: 405 QGNDPLTDFAVQSRDQIMDFLQQSLRDPVSLEDTLDHLIQ 444 >gi|323698505|ref|ZP_08110417.1| ATPase, FliI/YscN family [Desulfovibrio sp. ND132] gi|323458437|gb|EGB14302.1| ATPase, FliI/YscN family [Desulfovibrio desulfuricans ND132] Length = 474 Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 145/325 (44%), Positives = 202/325 (62%), Gaps = 12/325 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIF 155 GR ++A G P+DG KG + + + + P + R R+ + GIR ++ Sbjct: 96 ALLGRAVDAFGAPLDG-----KGPIHAQTFAPLHREPPNPLERPRINQPLDVGIRSVNAL 150 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNL 214 L GQR+G+ AGSG+GKST L M AR D +I+LVGERGREV EF+E LG + + Sbjct: 151 LTLGKGQRVGIMAGSGVGKSTTLGMMARYTKADVNVIALVGERGREVVEFMERDLGPEGM 210 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +SV+VVATSD+SP++R A A +AEYF +G +VLL++DS+TRFA + RE+ +G Sbjct: 211 ARSVLVVATSDKSPLIRMRAAYAATAVAEYFRDQGKDVLLMMDSVTRFAMAGREVGLAAG 270 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E P GY SVF+ LP+LLER G + KG+IT V +VLVDGD+ +PIADS RSILDG Sbjct: 271 EPPTRGGYTPSVFAHLPQLLERAG--KNRKGSITGVYTVLVDGDDFTEPIADSTRSILDG 328 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL R LA+ G YP +D L S+SRL + + + +L + F+ D+ IG Sbjct: 329 HIVLTRELADLGHYPAIDVLRSISRLRSDITTKEAQADGRALLRHMATFKRVEDMVNIGA 388 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y+ G + +DKA++ V I FL+Q Sbjct: 389 YQKGANPEVDKAINMVGPINRFLRQ 413 >gi|94987296|ref|YP_595229.1| flagellar biosynthesis/type III secretory pathway ATPase [Lawsonia intracellularis PHE/MN1-00] gi|94731545|emb|CAJ54908.1| Flagellar biosynthesis/type III secretory pathway ATPase [Lawsonia intracellularis PHE/MN1-00] Length = 439 Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 144/331 (43%), Positives = 207/331 (62%), Gaps = 5/331 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G NA G+P+ G + + L + + S P + R R++ G+R I+ L GQ Sbjct: 104 GHAFNAFGEPLSGGNPIIPEKL-IPLYSNPPSPLERPRIKDPLDVGVRAINSMITLGKGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+ AGSG+GKSTL+ M AR D +I L+GERGREV EF+E LG + + +SV+++ Sbjct: 163 RVGIMAGSGVGKSTLMGMMARYTSADVNVIGLIGERGREVVEFMEKELGPEGMTRSVLII 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+SP++R A A +AEYF +G +VLL++DS+TRFA + REI GE P +G Sbjct: 223 ATSDQSPLVRMRAAYAATAVAEYFRDQGKDVLLMMDSVTRFAMAAREIGLAVGEPPTTKG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y +VF++LP+LLER G S G IT + +VLVDGD+ N+PIAD+VRSILDGHIVL R Sbjct: 283 YTPTVFAQLPKLLERTGRS--NTGTITGIYTVLVDGDDFNEPIADAVRSILDGHIVLTRD 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA++ +P +D L S+SRL + ++ + + + F + D+ IG Y G + Sbjct: 341 LADQDHFPAIDVLRSISRLRSDICTPEQVQDGRIVGRYMATFRKAEDMINIGAYIQGSNE 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQ 431 +DKA+ I FLKQ+ SD S+ ED F+ Sbjct: 401 EIDKAITMHGPIESFLKQNISDRSTLEDSFR 431 >gi|182440967|dbj|BAG24092.1| HrcN [Pseudomonas cichorii] Length = 424 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 145/340 (42%), Positives = 206/340 (60%), Gaps = 10/340 (2%) Query: 103 GRVINALGKPIDGDD----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 G V++ G+ + GD +L + ++ PPA R R+E TG+R ID L Sbjct: 81 GSVLDGFGRSLSGDGPSAFALSGAAGAQPVIRDAPPATERPRIEAPLSTGLRAIDGLLTL 140 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217 GQR+G+FAG+G GK+TLL+ AR+ + ++ L+GERGRE+REF++ L + L+ ++ Sbjct: 141 GEGQRVGLFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRSRT 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 V+V +TSD S + R A TA TIAE F +G + LLI+DS+TRFA + REI SGE P Sbjct: 201 VLVCSTSDRSSMERARAAFTATTIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGE-P 259 Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 RG P SV+S LPRL+ER G G ITA+ SVL++ D+ NDP+AD VRS+LDGHI Sbjct: 260 AGRGGLPPSVYSLLPRLVERAG--RTRTGAITALYSVLIEQDSMNDPVADEVRSLLDGHI 317 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LAE G YP VD L S+SR ++ K + + L+ +++ + +G Y+ Sbjct: 318 VLSRRLAERGHYPAVDILTSLSRTMSNVVGTEQVKGATQIRRLLAAYQQVEMLIKLGEYQ 377 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEITK 435 G D + D AV I DFL+QS D +S ED + + Sbjct: 378 QGNDPLTDFAVQSRDQIMDFLQQSLRDPVSLEDTLDHLIQ 417 >gi|238757861|ref|ZP_04619043.1| secretion system apparatus ATP synthase ssaN [Yersinia aldovae ATCC 35236] gi|238703846|gb|EEP96381.1| secretion system apparatus ATP synthase ssaN [Yersinia aldovae ATCC 35236] Length = 409 Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 143/330 (43%), Positives = 202/330 (61%), Gaps = 5/330 (1%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 R R+ GRVI+ +G+ +D L +G + + P + RQ +E+ TGIR Sbjct: 64 RHRVPVGQDLLGRVIDGMGQALDRGPEL-QGPWR-DYDAPPPSPLTRQLIERPMLTGIRA 121 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 ID GQRIG+FA +G+GKSTLLSM RS + ++ L+GERGREVREFIE LG Sbjct: 122 IDSLLTCGEGQRIGIFAAAGVGKSTLLSMLCRSPDSEINVLVLIGERGREVREFIEQTLG 181 Query: 212 DNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + +++ V+V ++ + P L +M L A TIAE F +G VLL DS+TR+A + REIA Sbjct: 182 EEVRRRCVIVVSTADRPALERMRALFVATTIAEAFRDQGKRVLLFADSLTRYARAAREIA 241 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 SGE+ V YP VF+ LPRLLER G + E+G+ITA +VLV+GD+ N+P+AD VRS Sbjct: 242 LASGEVAVPGSYPPCVFAALPRLLERAG--KGERGSITAFYTVLVEGDDMNEPLADEVRS 299 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 +LDGHIVL+R LAE +P +D LAS+SR+ SA+ + ++L + + + + Sbjct: 300 LLDGHIVLSRRLAESAHFPAIDVLASLSRIMPMVTSAEHRAQANALRSQLSVYRDVELLV 359 Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +G ++ G D D AV P I FL+Q Sbjct: 360 RVGEFKRGEDSQADHAVDSYPAICHFLQQQ 389 >gi|329902175|ref|ZP_08273064.1| Type III secretion cytoplasmic ATP synthase [Oxalobacteraceae bacterium IMCC9480] gi|327548846|gb|EGF33475.1| Type III secretion cytoplasmic ATP synthase [Oxalobacteraceae bacterium IMCC9480] Length = 460 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 133/315 (42%), Positives = 198/315 (62%), Gaps = 6/315 (1%) Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 +++ ++ P A +R R+ TG+R ID + GQRIGVFAG G GK+TL++ AR Sbjct: 146 VTVPVIRDAPKATDRPRITTVLPTGVRAIDGMLTMGRGQRIGVFAGPGCGKTTLMASIAR 205 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242 D +I L+GERGRE+ EF++ L D L +K+++V ATSD + + R A +A IA Sbjct: 206 GCAADVIIFGLIGERGRELNEFLQHELDDELVRKTIIVCATSDRTSMERSRAAFSATAIA 265 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E F ++G NVLL++DS+TRFA + REI +GE P G+ SV++ LPRL+ER G + + Sbjct: 266 EAFRARGKNVLLLIDSLTRFARAQREIGLAAGEPPARGGFTPSVYTMLPRLIERAGSTTE 325 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 G+ITA+ +VLVDG+ +DPI D RS+LDGHIVL + LAE+G YP +D LAS+SR+ Sbjct: 326 --GSITAMYTVLVDGETTSDPIGDEARSLLDGHIVLTKKLAEQGHYPAIDVLASISRVMS 383 Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPS 422 ++ ++K S L+ R++E + +G Y+PG D + D AV P FL+Q Sbjct: 384 NVATSAQRKSASRFRELMARYDEMELLIRLGEYKPGGDPVADVAVRLRPEQLKFLRQDTR 443 Query: 423 DLSSEDVFQEITKKL 437 L+ F ++ ++L Sbjct: 444 HLTP---FDQMLRQL 455 >gi|160896090|ref|YP_001561672.1| flagellar protein export ATPase FliI [Delftia acidovorans SPH-1] gi|160361674|gb|ABX33287.1| flagellar protein export ATPase FliI [Delftia acidovorans SPH-1] Length = 480 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 156/428 (36%), Positives = 241/428 (56%), Gaps = 26/428 (6%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G ++ +T + T L V ++ QG++ L +V+ + ++ P G + +S Sbjct: 43 GTLTRLTGLVLEATGLQVPVGSQCWIRQQGQDP-VLAEVVGFAGERAFLMPAGDIQGLSS 101 Query: 84 GDLV---------------------FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122 G +V G R+ + GRV+++ G+P+D L Sbjct: 102 GAIVTPAEPFVAPLRFGDGVEPPVSLAAGVLRLPIGSGLLGRVVDSQGQPLDHGGPLA-- 159 Query: 123 DLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 D+S +++ + P AM+R V + TG+R ++ + GQR+G+FAGSG+GKS LL M Sbjct: 160 DVSADLLDRNPINAMDRDPVRETLDTGVRSLNALLTVGRGQRLGLFAGSGVGKSVLLGMM 219 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240 AR D +++ L+GERGREV+EF+ED LG + ++VVV A +D P+LR A Sbjct: 220 ARYTQADVIVVGLIGERGREVKEFVEDILGAQDRSRAVVVAAPADAPPLLRMQGAAYATA 279 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 IAE+F KG +VLL++DS+TR+A + REIA GE P +GYP S F++LP L+ER G Sbjct: 280 IAEHFRDKGQHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPALVERSGNG 339 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R+LAE G YP +D S SR+ Sbjct: 340 LNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHVVLSRALAESGHYPAIDIEQSASRV 399 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 S + +L + R+++ RD+ +G Y G D +D+A+ P + FL+QS Sbjct: 400 MHNVVSREHFELARRFRAVYSRYQKGRDLVQVGAYMAGSDPQMDEAIRLQPAMAAFLQQS 459 Query: 421 PSDLSSED 428 + +S D Sbjct: 460 MFESASMD 467 >gi|90579930|ref|ZP_01235738.1| flagellum-specific ATP synthase [Vibrio angustum S14] gi|90438815|gb|EAS63998.1| flagellum-specific ATP synthase [Vibrio angustum S14] Length = 440 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 136/334 (40%), Positives = 206/334 (61%), Gaps = 4/334 (1%) Query: 87 VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146 + H + P GRVI+ +G P+DG + + + + P + R+ +++ Sbjct: 89 ILHNSGLPVGPE--LLGRVIDGVGNPLDGLGPIFTEHRASFNATPINP-LARKPIKEPLD 145 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206 GI+ I+ + GQRIG+FAGSG+GKS L M R V++ L+GERGREV+EFI Sbjct: 146 VGIKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTSAQIVVVGLIGERGREVKEFI 205 Query: 207 EDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 E+ LG + +SVVV A +D SP++R T++TIAEYF +G +VLL++DS+TRFA + Sbjct: 206 EESLGPEGRARSVVVAAPADASPLMRLKGCQTSLTIAEYFRDQGFDVLLLMDSLTRFAQA 265 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 REIA + GE P +GYP SVF++LP L+ER G + +G+ITA +VL +GD+ DPIA Sbjct: 266 QREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNENQGSITAFFTVLSEGDDLQDPIA 325 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 D+ R+ILDGHIVL+R +A+ G YP +D SVSR+ S + + ++ ++ + Sbjct: 326 DASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPAIVSEEHMLMSKAVRQILSICRK 385 Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +D+ IG Y+PG D +D+A P + +L+Q Sbjct: 386 NQDLVSIGAYKPGTDNTIDQAFSFKPKLDAYLQQ 419 >gi|251789185|ref|YP_003003906.1| flagellum-specific ATP synthase [Dickeya zeae Ech1591] gi|247537806|gb|ACT06427.1| ATPase, FliI/YscN family [Dickeya zeae Ech1591] Length = 456 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 141/330 (42%), Positives = 197/330 (59%), Gaps = 2/330 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ KP+DG + G + + P + R +E G+R I+ + Sbjct: 114 ALLGRVLDGSAKPLDGLPAPETGYRASLATAPFNP-LQRTPIEHVLDVGVRAINALLTVG 172 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + L +SV Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGTEGLARSV 232 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGHHVLLIMDSLTRYAMAQREIALAIGEPPA 292 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 293 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 352 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + V + ++ RD+ +G Y G Sbjct: 353 SRQLAESGHYPAIDIEASISRAMTALIDENHYSAVRQFKQSLSSYQRNRDLINVGAYAAG 412 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 D +LD+A+ P + FL+Q + SS D Sbjct: 413 SDPMLDRAIQLYPHMQHFLQQGMFERSSFD 442 >gi|229528858|ref|ZP_04418248.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 12129(1)] gi|229332632|gb|EEN98118.1| flagellum-specific ATP synthase FliI [Vibrio cholerae 12129(1)] Length = 439 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 140/321 (43%), Positives = 204/321 (63%), Gaps = 6/321 (1%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI+ +G P+DG + S+ M P + R+ + + GI+ I+ + G Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAMPINP--LARKPINEPLDVGIKAINGLLTVGKG 159 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QRIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 160 QRIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVV 219 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P + Sbjct: 220 AAPADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATK 279 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 280 GYPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSR 339 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGV 399 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+ G Sbjct: 340 EMADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKLGT 398 Query: 400 DLILDKAVHQVPIIYDFLKQS 420 D +D A P + +L+Q+ Sbjct: 399 DKAIDAAFTLKPKLDQYLQQA 419 >gi|46578726|ref|YP_009534.1| flagellum-specific ATP synthase FliI [Desulfovibrio vulgaris str. Hildenborough] gi|120603710|ref|YP_968110.1| flagellar protein export ATPase FliI [Desulfovibrio vulgaris DP4] gi|46448138|gb|AAS94793.1| flagellum-specific ATP synthase FliI [Desulfovibrio vulgaris str. Hildenborough] gi|120563939|gb|ABM29683.1| type III secretion system ATPase, FliI/YscN [Desulfovibrio vulgaris DP4] gi|311232598|gb|ADP85452.1| ATPase, FliI/YscN family [Desulfovibrio vulgaris RCH1] Length = 437 Score = 252 bits (644), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 143/322 (44%), Positives = 199/322 (61%), Gaps = 4/322 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR +A G P+DG + + + + P + R R++ G+R I+ L GQ Sbjct: 102 GRAFDAFGAPLDGGTPV-MPEAWAPLYASPPNPLTRPRIDTPLDVGVRCINSLLTLGRGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+ AGSG+GKSTL+ M AR +I L+GERGREV EF+E LG + + +SV+VV Sbjct: 161 RVGIMAGSGVGKSTLMGMMARYTEAQVNVIGLIGERGREVVEFMEKDLGPEGMARSVLVV 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+SP++R A A +AE+F +G +VLL++DS+TRFA + RE+ GE P +G Sbjct: 221 ATSDQSPLVRMRAAYAATAVAEFFRDQGKDVLLMMDSVTRFAMAAREVGLAVGEPPTTKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y +VF++LPRLLER G S + G IT + +VLVDGD+ N+PIAD+VRSILDGHIVL R Sbjct: 281 YTPTVFAQLPRLLERAGRSPE--GTITGIYTVLVDGDDFNEPIADAVRSILDGHIVLTRE 338 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA++G +P +D L S+SRL D LT + F D+ IG Y G + Sbjct: 339 LADQGHFPAIDVLKSISRLRTDICPDDIVNAGRILTRHMATFRRVEDMINIGAYATGSNP 398 Query: 402 ILDKAVHQVPIIYDFLKQSPSD 423 +DKA+ V I DFL+Q +D Sbjct: 399 DIDKAIAMVGPINDFLRQHITD 420 >gi|110632469|ref|YP_672677.1| FliI/YscN family ATPase [Mesorhizobium sp. BNC1] gi|110283453|gb|ABG61512.1| type III secretion system ATPase, FliI/YscN [Chelativorans sp. BNC1] Length = 429 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 161/398 (40%), Positives = 227/398 (57%), Gaps = 9/398 (2%) Query: 44 CLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACW 101 C+G+ N D L +V+ + + P G IS + F + Sbjct: 32 CVGEICAVSRSNGDPILAEVVGFDQGEAILTPYGGTAGISHNSTIEPLMSTFEVPVGEEL 91 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRVI+A+GKPID S+ P M R +++ F G+RV+D G Sbjct: 92 TGRVIDAMGKPIDAGPSVTSCAF-YPGHRTAPNPMLRPTIDRPFILGVRVLDGALTCGEG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FA +G GKSTL+S+ R +D+ +I+L+GERGREVREF+E LG L KS+VV Sbjct: 151 QRMGIFAAAGGGKSTLVSLMVRFAEYDRCVIALIGERGREVREFLEHQLGPTGLAKSIVV 210 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 VATSD I + A TA +AE+ +G+ VLLI+DS+TRFA + R+I +GE P R Sbjct: 211 VATSDRPAIEQVKAAYTATALAEFHRDRGERVLLIMDSLTRFARAQRQIGLAAGEPPTRR 270 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 G+P SVF LP L+ER G S G+ITA +VLV+GD+ N+P+AD VRS+LDGHIVL+R Sbjct: 271 GFPPSVFELLPGLVERAGLSGD--GSITAFYTVLVEGDDMNEPVADEVRSLLDGHIVLSR 328 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YPPVD + S SR+ + S D + V L+ + +E + IG Y G D Sbjct: 329 KLAEAGHYPPVDVITSTSRILSRIVSPDHLEAVHKARGLMSKLQEIELLLKIGEYSKGAD 388 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + D+A+ + + FL+Q ++ SS F+E L+ Sbjct: 389 ALADEALARRTALDAFLRQGVNEFSS---FEETVIALK 423 >gi|220904836|ref|YP_002480148.1| ATPase FliI/YscN [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869135|gb|ACL49470.1| ATPase FliI/YscN [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 504 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 135/299 (45%), Positives = 194/299 (64%), Gaps = 7/299 (2%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I + P + R R+ G+R ++ L GQR+G+ AGSG+GKSTL+ M AR Sbjct: 166 IYADPPSPLQRPRITDILDVGVRSVNSLLTLGKGQRVGIMAGSGVGKSTLMGMMARYTRA 225 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+L+GERGREV EF+E LG + + +SV+V+ATSD+SP++R A A +AEYF Sbjct: 226 DVNVIALIGERGREVVEFMERDLGPEGMARSVLVIATSDQSPLVRMRAAYAATGVAEYFR 285 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 KG +VLL++DS+TRFA + RE+ GE P +GY +VF++LP+LLER G S +G Sbjct: 286 DKGMDVLLMMDSVTRFAMAAREVGLAVGEPPTTKGYTPTVFAQLPKLLERAGRS--ARGT 343 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT + +VLVDGD+ N+PIAD+VRSILDGHIVL R LA++G +P +D L S+SRL ++ Sbjct: 344 ITGIYTVLVDGDDFNEPIADAVRSILDGHIVLTRDLADQGHFPAIDVLRSISRL--RSDI 401 Query: 367 ADEKKLVSS--LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 D + ++S +T + F + D+ IG Y G + +D A+ +P I FL+Q D Sbjct: 402 CDRQDVLSGRVVTRNMSTFRKVEDMVNIGAYAKGTNAEIDAAIESMPAINSFLRQDVGD 460 >gi|317153721|ref|YP_004121769.1| FliI/YscN family ATPase [Desulfovibrio aespoeensis Aspo-2] gi|316943972|gb|ADU63023.1| ATPase, FliI/YscN family [Desulfovibrio aespoeensis Aspo-2] Length = 475 Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 144/323 (44%), Positives = 200/323 (61%), Gaps = 4/323 (1%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 + GR ++ G P+DG + D + + + P + R R+ + GIR ++ Sbjct: 94 AKAMLGRALDCFGTPMDGKGPITP-DAFVPLHREPPNPLERPRINEPLDVGIRSVNALLT 152 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216 L GQR+G+ AGSG+GKST L M AR D +I+LVGERGREV EF+E LG + + + Sbjct: 153 LGKGQRVGIMAGSGVGKSTTLGMMARYTKADINVIALVGERGREVVEFMERDLGPEGMAR 212 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 SV+VVATSD+SP++R A A +AEYF +G +VLL++DS+TRFA + RE+ +GE Sbjct: 213 SVLVVATSDKSPLIRMRAAYAATAVAEYFRDQGKDVLLMMDSVTRFAMAGREVGLAAGEP 272 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P GY SVF+ LP+LLER G S KG+IT + +VLVDGD+ +PIADS RSILDGHI Sbjct: 273 PTRGGYTPSVFAHLPQLLERAGKS--AKGSITGIYTVLVDGDDFTEPIADSTRSILDGHI 330 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL R LA+ G YP +D L SVSRL + + +L + F+ D+ IG Y+ Sbjct: 331 VLTRELADLGHYPAIDVLRSVSRLRGDITTNQAQADGQALLRHMATFKRVEDMVNIGAYQ 390 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G ++ +DKA+ V I FL+Q Sbjct: 391 KGANVEVDKAIAMVAPINGFLRQ 413 >gi|1071643|gb|AAA82637.1| ATPase [Escherichia coli] Length = 457 Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 142/321 (44%), Positives = 192/321 (59%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGS +GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSAVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A D SP+LR P A IAE F +G +VLLI+DS+TR+ + REIA GE P Sbjct: 234 VIAAPRDVSPLLRMRMPAYATRIAEDFRDRGQHVLLIMDSLTRYGMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR S V + L+ F RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFHGNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|171321204|ref|ZP_02910174.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5] gi|171093514|gb|EDT38684.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5] Length = 443 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 142/378 (37%), Positives = 222/378 (58%), Gaps = 4/378 (1%) Query: 45 LGDFVVHQGKNSD-NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWC 102 LG G+ S+ L +++ + V + P I +GD V P + Sbjct: 44 LGSLCAIGGEQSEPTLAEIVNVERTRVTLAPYSTASAIRIGDEVAALQADATIPVGDAYL 103 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG+P+DG +LG + + P + RQ E +TG+R +D L GQ Sbjct: 104 GRVVDPLGRPLDGAGALGHCVANWPLAGIATPPLERQSPEHVLETGVRALDALLTLGVGQ 163 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221 R+G+FAGSG+GK+TLL AR D ++ LVGERGREV E L + ++ +VV Sbjct: 164 RVGLFAGSGVGKTTLLGALARDVYADVRVLCLVGERGREVEECWNRTLSAASRARTTLVV 223 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+S LR + A++IAEYF S+G +VLL++DS+TR+A ++REI +GE P R Sbjct: 224 ATSDQSAALRARSVPAALSIAEYFRSQGAHVLLMIDSVTRYALALREIGLAAGEPPTVRA 283 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y VF+ LP+++ER G + K G ITA+++VL + D+ +DP+A+++RS+LDGHIVL+R+ Sbjct: 284 YTPGVFAALPKIVERCG-ALKSGGAITALMTVLTESDDIDDPMAETMRSLLDGHIVLSRA 342 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE+G++PP+ SVSR++ + E+ L + + ++ ++ + G Y G Sbjct: 343 LAEQGQFPPIQVPKSVSRVSRYVANDAERALAADAIAQLALYDASKTLVESGLYTAGSHP 402 Query: 402 ILDKAVHQVPIIYDFLKQ 419 LD+A+ P + FL+Q Sbjct: 403 ALDRALRLRPALLSFLRQ 420 >gi|333003037|gb|EGK22591.1| flagellar protein export ATPase FliI [Shigella flexneri VA-6] Length = 457 Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 144/326 (44%), Positives = 196/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F + +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRSQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434 >gi|89075516|ref|ZP_01161927.1| flagellum-specific ATP synthase [Photobacterium sp. SKA34] gi|89048788|gb|EAR54359.1| flagellum-specific ATP synthase [Photobacterium sp. SKA34] Length = 440 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 136/334 (40%), Positives = 206/334 (61%), Gaps = 4/334 (1%) Query: 87 VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146 + H + P GRVI+ +G P+DG + + + + P + R+ +++ Sbjct: 89 ILHNSGLPVGPE--LLGRVIDGVGNPLDGLGPIFTEHRASFNATPINP-LARKPIKEPLD 145 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206 GI+ I+ + GQRIG+FAGSG+GKS L M R V++ L+GERGREV+EFI Sbjct: 146 VGIKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTNAQIVVVGLIGERGREVKEFI 205 Query: 207 EDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 E+ LG + +SVVV A +D SP++R T++TIAEYF +G +VLL++DS+TRFA + Sbjct: 206 EESLGPEGRARSVVVAAPADASPLMRLKGCQTSLTIAEYFRDQGFDVLLLMDSLTRFAQA 265 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 REIA + GE P +GYP SVF++LP L+ER G + +G+ITA +VL +GD+ DPIA Sbjct: 266 QREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNENQGSITAFFTVLSEGDDLQDPIA 325 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 D+ R+ILDGHIVL+R +A+ G YP +D SVSR+ S + + ++ ++ + Sbjct: 326 DASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPAIVSEEHMLMSKAVRQILSICRK 385 Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +D+ IG Y+PG D +D+A P + +L+Q Sbjct: 386 NQDLVSIGAYKPGTDNTIDQAFSFKPKLDAYLQQ 419 >gi|282890881|ref|ZP_06299398.1| type III secretion cytoplasmic ATPase SctN [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499235|gb|EFB41537.1| type III secretion cytoplasmic ATPase SctN [Parachlamydia acanthamoebae str. Hall's coccus] Length = 438 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 158/419 (37%), Positives = 239/419 (57%), Gaps = 24/419 (5%) Query: 31 SVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVG----IG--EEISLG 84 +V + + V +G+ + + + L +V+ + V++ P+G IG E+ Sbjct: 29 TVGMLIKAIVPQVKIGEVCLVKREGEPLLTEVVGFTREEVFLSPLGEMTGIGPSSEVIPT 88 Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQR 140 L H ++ P GRV+N LG+P+D KG L + ++ P + R+R Sbjct: 89 RLPLH---IKVGPQ--LLGRVLNGLGEPLD---VATKGPLELNEVYPVIQAPPDPLKRKR 140 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 + + GIR ID GQR+G+FA +G GKST L M AR+ D +ISL+GERGR Sbjct: 141 IVEPISVGIRAIDGVLTTGLGQRVGIFAAAGGGKSTTLGMIARNAMADVNVISLIGERGR 200 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 E+R+FIE LG + LK+SV+VV+TSD++ LR A IAEYF +G +V+L++DS+ Sbjct: 201 ELRDFIEKDLGPEGLKRSVLVVSTSDQASQLRLNAAYVGTAIAEYFRDQGKSVILMMDSV 260 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA ++RE+ +GE P GY SVFS LP+LLER G S + G+ITA ++LV GD+ Sbjct: 261 TRFARALREVGLAAGEPPARAGYTPSVFSTLPKLLERTGNS--DVGSITAFYTILVAGDD 318 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 N+P+AD VRSILDGHI+L+ LA + YP +D L+S SR+ + +LV L + Sbjct: 319 MNEPVADEVRSILDGHIILSSELARQYHYPAIDVLSSASRVMPSIVPKEHLQLVGKLKEV 378 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + +++ + IG Y+ G D D A+ + + FLKQ + S +QE + L+ Sbjct: 379 LANYKKNELLIKIGEYKRGADKAGDFAIDHIDKVNKFLKQGVDEKCS---YQETMQLLR 434 >gi|332994118|gb|AEF04173.1| flagellum-specific ATP synthase [Alteromonas sp. SN2] Length = 444 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 155/408 (37%), Positives = 229/408 (56%), Gaps = 10/408 (2%) Query: 16 SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPV 75 S +V G + I V C + +G + Q + +V+ DI Y+ P Sbjct: 18 SPPIVAAGKLVRGIGLTLEAVGC---QLPVGSQCLVQTIEGEIEAEVVGFGADITYLMPT 74 Query: 76 GIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP 134 I G V R ++ GRV++ G P+DG LG+ + + PP Sbjct: 75 EAVRGIVPGSRVMPLNRQSGLAVGMGLLGRVVDGNGNPLDG---LGEIKTETRVPTTRPP 131 Query: 135 --AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 + R+ + + G+R I+ + GQR+G+FAGSG+GKS LL M R D V++ Sbjct: 132 INPLIRRAITQPMDVGVRAINALNTVGVGQRMGLFAGSGVGKSVLLGMMTRGCEADVVVV 191 Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVVAT-SDESPILRKMAPLTAVTIAEYFSSKGDN 251 LVGERGREV+EFI D L + + VVVA +D SP++R TAVTIAEYF +G Sbjct: 192 GLVGERGREVKEFIHDILTEEERARAVVVAAPADTSPLMRLKGCETAVTIAEYFRDQGLK 251 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 VLL++DS+TR+A + REIA GE P +GYP SVF+ LP L+ER G +++G+ITA Sbjct: 252 VLLLIDSLTRYAMAQREIALAVGEPPATKGYPPSVFARLPALVERAGNGSEKQGSITAFY 311 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL +GD+ DPIAD+ R+ILDGH+VL+R+LA+ G YP +D AS+SR+ S + ++ Sbjct: 312 TVLTEGDDLQDPIADAARAILDGHVVLSRTLADSGHYPAIDIEASISRVMPMVVSDEHQQ 371 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + + + +++ +D+ IG Y G D +D A+ P I FL+Q Sbjct: 372 MARRVRQVYSNYKQNQDLISIGAYAKGSDPRIDLAIRAEPAINAFLQQ 419 >gi|301168110|emb|CBW27696.1| putative flagellum-specific ATP synthase [Bacteriovorax marinus SJ] Length = 457 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 153/384 (39%), Positives = 225/384 (58%), Gaps = 23/384 (5%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPV----GIGEE--ISLGDLVFHWGRFRISPSAC 100 +FV G+ LG+V+ IN P GI E + L DL I S Sbjct: 52 EFVTEFGERC--LGEVVAINGHKCMAMPYDEISGINSETKVYLKDLTT-----TIKLSKN 104 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ G PIDG + + S I + R +++ G+ ++ F Sbjct: 105 MLGRVIDFQGNPIDGKGPITDIEESRSIYGTALNPLERPPIKEPLDVGVHAVNCFMTAGK 164 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+ + AGSG+GKS L M A++ D +I+L+GERGREV EFIE LG + +K+SVV Sbjct: 165 GQRMAIMAGSGVGKSVTLGMIAQNSSADVNVIALIGERGREVLEFIESDLGPEGIKRSVV 224 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 +VATSD SP++R A A TI+E+F +VLL++DSITRFA + REI+ ++GE P Sbjct: 225 IVATSDTSPLIRMKAAYVATTISEFFRDDNKDVLLMMDSITRFAMANREISLSAGEPPGQ 284 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GY SVF++LP+L+ER G ++ G IT + +VLV+G + ++PIAD+VR+I DGHIVL+ Sbjct: 285 KGYTPSVFAQLPKLMERAG-TKSNSGTITGIYTVLVEGGDMDEPIADAVRAIADGHIVLS 343 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA ++P +D L S+SR+ +K + + K + S L L+ ++E D+ +G Y G Sbjct: 344 RELASRNQFPAIDVLQSLSRVMNKVTTNEHKIVASHLRDLLSAYKENEDLINVGAYARGS 403 Query: 400 DLILDKAVHQVPIIYD----FLKQ 419 + +DKA+ +IYD LKQ Sbjct: 404 NPKVDKAL----VIYDDLMALLKQ 423 >gi|329889302|ref|ZP_08267645.1| putative ATP synthase hrpB6 [Brevundimonas diminuta ATCC 11568] gi|328844603|gb|EGF94167.1| putative ATP synthase hrpB6 [Brevundimonas diminuta ATCC 11568] Length = 383 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 140/329 (42%), Positives = 201/329 (61%), Gaps = 3/329 (0%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 R + GRVI+A G+P+DG + ++ + P + R + F TG+R Sbjct: 37 RTEVPSGPGLLGRVIDAFGRPLDGLGPIAGPVALRDVYADAPNPLARPPISALFPTGVRA 96 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 +D + GQR+GVFA +G GKSTL+ MFAR D +I+L+GERGREVREF++D LG Sbjct: 97 VDTLLSVGVGQRVGVFAMAGGGKSTLMGMFARHCAADVNVIALIGERGREVREFLDDSLG 156 Query: 212 -DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + L +SVVVVATSD + R A A IAE F ++G V+L +DS+TRFA ++REI Sbjct: 157 PEGLARSVVVVATSDRPAMERVRAAHAATAIAEGFRAQGLRVMLQMDSVTRFARALREIG 216 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 + GE V RG+P SVF+ELPRL ER G E G+ITA +VL++ + DPI + VRS Sbjct: 217 LSVGEPAVRRGFPPSVFAELPRLFERAG--AIEGGSITAFYTVLIEDEEGGDPIGEEVRS 274 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 ILDGH+ L+R LA+ YP +DPL S+SR+ + S + + + + ++ E + Sbjct: 275 ILDGHVYLSRKLAQANHYPAIDPLMSLSRVFPRVTSPEHQAAAGKVRAWLAKYAEIEFLL 334 Query: 391 LIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 IG Y+PG D + D+AV ++P + L+Q Sbjct: 335 QIGEYKPGGDPLADEAVQRMPALRALLQQ 363 >gi|147675718|ref|YP_001217653.1| flagellum-specific ATP synthase [Vibrio cholerae O395] gi|262167490|ref|ZP_06035196.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC27] gi|146317601|gb|ABQ22140.1| flagellum-specific ATP synthase FliI [Vibrio cholerae O395] gi|227014026|gb|ACP10236.1| flagellum-specific ATP synthase FliI [Vibrio cholerae O395] gi|262024062|gb|EEY42757.1| flagellum-specific ATP synthase FliI [Vibrio cholerae RC27] Length = 439 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 138/320 (43%), Positives = 203/320 (63%), Gaps = 4/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + + + P + R+ + + GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGPIYTDQRASLNAIPINP-LARKPINEPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFIE+ LG D ++SVVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIEEILGVDGRQRSVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAEYF +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADSSPLMRLKGCQTALTIAEYFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGGPHQGSITAFFTVLTEGDDLQDPIADASRAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRPGVD 400 +A+ G YP +D SVSR+ + + DE L+S ++ ++ + +D+ IG Y+ G D Sbjct: 341 MADAGHYPAIDVEKSVSRVMPQ-ITTDEHLLMSKAVRQILSVCRKNQDLVSIGAYKLGTD 399 Query: 401 LILDKAVHQVPIIYDFLKQS 420 +D A P + +L+Q+ Sbjct: 400 KAIDAAFTLKPKLDQYLQQA 419 >gi|149184181|ref|ZP_01862499.1| ATPase FliI/YscN [Erythrobacter sp. SD-21] gi|148831501|gb|EDL49934.1| ATPase FliI/YscN [Erythrobacter sp. SD-21] Length = 443 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 131/324 (40%), Positives = 194/324 (59%), Gaps = 2/324 (0%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 + GR ++ G+PIDG + + A++R RV + F GIR ++ T Sbjct: 102 FLGRAVDGAGEPIDGGGPV-LATTTWPAGGHRVGALDRSRVTQMFDCGIRSLNALTTFGV 160 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVV 219 GQRIG+ AGSG+GKS L+ M + D V++ L+GER REV +F+ ++ G+ + + Sbjct: 161 GQRIGIMAGSGVGKSVLMDMIVDNAEADAVVVGLIGERAREVSDFVSRHMAGERAANTAI 220 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V +D + LR + A +IAE+ S+G VLLILDS+TR AH+ REI GE A Sbjct: 221 VAVPADHAANLRLRGAMLATSIAEHLRSQGKRVLLILDSLTRVAHAAREIGILLGEPGAA 280 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP S S + +++ER G S++ G IT + +VL DGD+HNDP+ D+ R+ILDGHIVL+ Sbjct: 281 RGYPPSALSTITKMIERAGNSKETGGAITGIYTVLADGDDHNDPVVDTARAILDGHIVLS 340 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R +A+ G+YP VD AS+SR+ + S + + L FEE RD+ ++G YR G Sbjct: 341 REIAQRGQYPAVDVGASLSRVMNDIVSVEHVENARKFRALSASFEENRDLIMMGAYRQGT 400 Query: 400 DLILDKAVHQVPIIYDFLKQSPSD 423 D +LD+A+ + P + DFL Q + Sbjct: 401 DSLLDEAIIRQPRMSDFLAQGTGE 424 >gi|191173266|ref|ZP_03034796.1| flagellar protein export ATPase FliI [Escherichia coli F11] gi|190906383|gb|EDV65992.1| flagellar protein export ATPase FliI [Escherichia coli F11] gi|324013496|gb|EGB82715.1| flagellar protein export ATPase FliI [Escherichia coli MS 60-1] Length = 457 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 144/326 (44%), Positives = 196/326 (60%), Gaps = 12/326 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDI 154 GRV++ GKP+DG D+ G L PP + R +E TG+R I+ Sbjct: 115 ALLGRVLDGSGKPLDGLPFPDTTETGALI------TPPFNPLQRTPIEHVLDTGVRPINA 168 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + Sbjct: 169 LLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEG 228 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA Sbjct: 229 RARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAI 288 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 289 GEPSATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILD 348 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAE G YP +D AS+SR S V + L+ F+ RD+ +G Sbjct: 349 GHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDLVSVG 408 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D +LDKA+ P + +L+Q Sbjct: 409 AYAKGSDPMLDKAIALWPQLEGYLQQ 434 >gi|92114081|ref|YP_574009.1| ATPase FliI/YscN [Chromohalobacter salexigens DSM 3043] gi|91797171|gb|ABE59310.1| ATPase FliI/YscN [Chromohalobacter salexigens DSM 3043] Length = 468 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 149/386 (38%), Positives = 218/386 (56%), Gaps = 11/386 (2%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-- 100 CL + H G +V+ D +++ P+G + G V G R ++ Sbjct: 62 ACLVELAQH-GHVGYAEAEVVGFAGDRLFLMPLGDTHGLVPGARVLTLGNNRQDAASARR 120 Query: 101 ------WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 GRV++ G+P+DG +L + + + P ++R ++ GIR I+ Sbjct: 121 FPLGDALLGRVLDGNGRPLDGKGALDHASHAPLSTAPINP-LDRAPIDNVIDVGIRAING 179 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DN 213 + GQR+G+FAGSG+GKS LL M +R D +++ L+GERGREV++FIE+ LG + Sbjct: 180 LLSVGRGQRMGLFAGSGVGKSVLLGMMSRYTQADVIVVGLIGERGREVKDFIENILGPEG 239 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 +++VVV A +D SP+ R A IAE F +G NVLLI+DS+TR+A ++REIA Sbjct: 240 RERAVVVAAPADVSPLQRLQGASYATRIAEGFRDEGRNVLLIMDSLTRYAMAMREIALAV 299 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF+ LP L+ER G G+ITA +VL +GD+ DPIAD+ R+ILD Sbjct: 300 GEPPATKGYPPSVFARLPGLVERAGNGRPGGGSITAFYTVLTEGDDQQDPIADAARAILD 359 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GH+VL+R LAE G YP +D AS+SR D ++ L R++ RD+ +G Sbjct: 360 GHVVLSRQLAESGHYPAIDIEASISRAMTAIVEGDHQRRAQRFKQLFSRYQRNRDLISVG 419 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ 419 Y G D LD+AV P + FL+Q Sbjct: 420 AYAAGHDPQLDRAVALYPRLEAFLQQ 445 >gi|264676597|ref|YP_003276503.1| flagellar protein export ATPase FliI [Comamonas testosteroni CNB-2] gi|262207109|gb|ACY31207.1| flagellar protein export ATPase FliI [Comamonas testosteroni CNB-2] Length = 462 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 154/413 (37%), Positives = 231/413 (55%), Gaps = 26/413 (6%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF---------------- 93 +HQ L +V+ + ++ P G + +S G +V F Sbjct: 50 IHQHGQEPVLAEVVGFAGERAFLMPAGDIQGLSSGAMVTPAAPFVPVPQLGVVETEKVSQ 109 Query: 94 -----RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKT 147 R+ GRV+++ G P+D LG + E++ + P AM+R V + T Sbjct: 110 TVGVLRLPMGDGLLGRVVDSQGTPLDHAGELGS--VVPEVLDRNPINAMDRDPVRESLDT 167 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G++ ++ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EF+E Sbjct: 168 GVKALNALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVE 227 Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 D LG + ++VVV A +D P+LR A IAE+F KG +VLL++DS+TR+A + Sbjct: 228 DILGAQDRSRAVVVAAPADAPPLLRMQGASYATAIAEHFRDKGKHVLLLMDSLTRYAMAQ 287 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REIA GE P +GYP S F++LP L+ER G G+ITA +VL +GD+ DPIAD Sbjct: 288 REIALAIGEPPATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIAD 347 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 + R+ILDGH+VL+R+LAE G YP +D S SR+ S + +L + R+++ Sbjct: 348 AARAILDGHVVLSRALAETGHYPAIDIEQSASRVMHNVVSREHFELARRFRAVYSRYQKG 407 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 RD+ +G Y PG D LD+A+ P + FL+QS + SS E + + +Q Sbjct: 408 RDLVQVGAYVPGSDPQLDEAIALQPAMTGFLQQSMFESSSMEQSLAGMAQAMQ 460 >gi|283836559|ref|ZP_06356300.1| invasion protein InvC [Citrobacter youngae ATCC 29220] gi|291067488|gb|EFE05597.1| invasion protein InvC [Citrobacter youngae ATCC 29220] Length = 441 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 139/294 (47%), Positives = 189/294 (64%), Gaps = 4/294 (1%) Query: 129 MSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 ++ +PPA M+R ++ GIR ID GQRIG+FA +G GKSTLLSM Sbjct: 131 LNALPPAPMDRALIDTILPVGIRAIDGALTCGRGQRIGIFAAAGGGKSTLLSMLCDGVEA 190 Query: 188 DKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D ++++LVGERGREVREF+E L +N + + V +VATS+ + R A A TIAEYF Sbjct: 191 DVIVLALVGERGREVREFLEFTLSENARARCVTIVATSERPALERLKASFVATTIAEYFR 250 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G NV+L++DS+TR+A + RE+ +SGE PVA G+P SVF+ LPRLLER G + G+ Sbjct: 251 DRGKNVVLMIDSLTRYARAAREVGLSSGEPPVASGFPPSVFATLPRLLERAG--NGKVGS 308 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT +VLV+GDN N+P+AD VRSILDGHIVL+R LAE YP +D ASVSR+ + + Sbjct: 309 ITGFYTVLVEGDNMNEPVADEVRSILDGHIVLSRKLAEANHYPAIDVSASVSRVMRQIAT 368 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + L L L+ + E + +G Y+ G DL DKA+ P I FL+Q+ Sbjct: 369 PEHVDLAGYLRKLLALYREIELLVRVGEYKQGQDLEADKALRCWPEIQRFLQQN 422 >gi|326386949|ref|ZP_08208563.1| FliI/YscN family ATPase [Novosphingobium nitrogenifigens DSM 19370] gi|326208629|gb|EGD59432.1| FliI/YscN family ATPase [Novosphingobium nitrogenifigens DSM 19370] Length = 442 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 141/354 (39%), Positives = 205/354 (57%), Gaps = 15/354 (4%) Query: 83 LGDLVFHWGRFRISPSA---------CWCGRVINALGKPIDGDDSL--GKGDLSMEIMSK 131 LGD V R+ P + GR ++ G+PIDG + G+ S I + Sbjct: 74 LGDPVLLRPGARVRPEGRPGMLPVGEAFLGRAVDGEGQPIDGGPPIMSGREWPSGGIRAG 133 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 A++R V F G+R ++ T GQRIG+ AGSG+GKS LL M A + VI Sbjct: 134 ---ALDRSPVRATFDVGVRALNALTTFGVGQRIGIMAGSGVGKSVLLDMIAHGAEAEIVI 190 Query: 192 ISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 + L+GER REV +F+E ++ G ++S+VV +D +P LR + A ++AEYF G Sbjct: 191 VGLIGERAREVSDFVERHMQGPKRERSIVVAVPADHAPNLRIRGAMLATSMAEYFRKAGR 250 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLLI+DS+TR AH+ REIA GE ARGYP S + + +L+ER G S + G++T + Sbjct: 251 RVLLIMDSLTRVAHAGREIALLLGEPGAARGYPPSALATITKLVERAGNSAESGGSVTGL 310 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VL DGDN +DP+ D+ RSILDGH+VL+R LA+ G+YP +D AS+SR+ + + D Sbjct: 311 YTVLADGDNQDDPVVDTARSILDGHVVLSRDLAQRGQYPAIDIAASLSRVMNDIVAPDHA 370 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424 ++ LI +E RD+ L+G YR G D LD+A+ + FL QS ++ Sbjct: 371 RIARKFRALIATYEANRDLVLMGAYRQGADPQLDRAIAMHDRLTAFLAQSQKEI 424 >gi|330445369|ref|ZP_08309021.1| flagellar protein export ATPase FliI [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489560|dbj|GAA03518.1| flagellar protein export ATPase FliI [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 440 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 135/335 (40%), Positives = 207/335 (61%), Gaps = 4/335 (1%) Query: 87 VFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK 146 + H + P GRVI+ +G P+DG + + + P ++R+ +++ Sbjct: 89 ILHNSGLPVGPE--LLGRVIDGVGNPLDGLGPIFTEQRASFNAIPINP-LSRKPIKEPLD 145 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206 GI+ I+ + GQRIG+FAGSG+GKS L M R V++ L+GERGREV+EFI Sbjct: 146 VGIKAINGCLTVGKGQRIGLFAGSGVGKSVTLGMMTRGTSAQIVVVGLIGERGREVKEFI 205 Query: 207 EDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 ++ LG + +SVVV A +D SP++R T++TIAEYF +G +VLL++DS+TRFA + Sbjct: 206 DEILGPEGRARSVVVAAPADASPLMRLKGCQTSLTIAEYFRDQGFDVLLLMDSLTRFAQA 265 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 REIA + GE P +GYP SVF++LP L+ER G + +G+ITA +VL +GD+ DPIA Sbjct: 266 QREIALSVGEPPATKGYPPSVFAKLPALVERAGNGNENQGSITAFFTVLSEGDDLQDPIA 325 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 D+ R+ILDGHIVL+R +A+ G YP +D SVSR+ S + + ++ ++ + Sbjct: 326 DASRAILDGHIVLSREMADAGHYPAIDVERSVSRVMPAIVSEEHMLMSKAVRQILSICRK 385 Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +D+ IG Y+PG D +D+A P + +L+Q+ Sbjct: 386 NQDLVSIGAYKPGTDNTIDQAFSFKPKLDAYLQQT 420 >gi|90415349|ref|ZP_01223283.1| flagellum-specific ATP synthase FliI [marine gamma proteobacterium HTCC2207] gi|90332672|gb|EAS47842.1| flagellum-specific ATP synthase FliI [marine gamma proteobacterium HTCC2207] Length = 444 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 145/353 (41%), Positives = 207/353 (58%), Gaps = 9/353 (2%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA---CWCGRVINALGKPIDGDD 117 +V+ N D +Y+ P E + +G W R + ++ GRVI+ LG+P+D Sbjct: 61 EVVGFNDDTLYLMP--FSEPVGIGPGARVWVVSRHAKASLGEAMLGRVIDGLGQPLDEGG 118 Query: 118 SLGKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + L +E ++ P M R + K TGI+ I+ L GQRIG+ AGSG+GKS Sbjct: 119 PIAYSEQLGLEGLAINP--MERGPISKILDTGIKAINTCLTLGQGQRIGLVAGSGVGKSV 176 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAP 235 LL M R+ D V+I L+GERGREV+EFI+ LG+ L KSVVV A ++ SP+LR A Sbjct: 177 LLGMLTRNTEADVVVIGLIGERGREVQEFIQHTLGEEGLAKSVVVAAPANISPVLRLKAT 236 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 IAEYF +G NVL++ DS+TR AH+ REI GE P A+GYP SVF+ LPRL+E Sbjct: 237 YLTHLIAEYFRDRGKNVLMLCDSLTRVAHAQREIGLAIGEPPTAKGYPPSVFAMLPRLIE 296 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R G K G+ITA+ +VL +GD+ DPI D R+ LDG ++L+RSLA+ YP +D Sbjct: 297 RTGVGRKGHGSITAIYTVLAEGDDRADPIVDIARASLDGQVLLSRSLADAAHYPAIDLSG 356 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVH 408 S+SR+ + D K + L +++ D+ +G Y G + LD+A+ Sbjct: 357 SISRVMPNLVAPDVFKAANRFRRLWTLYQQNEDLIQVGAYEAGTNPDLDEAIR 409 >gi|332702975|ref|ZP_08423063.1| ATPase, FliI/YscN family [Desulfovibrio africanus str. Walvis Bay] gi|332553124|gb|EGJ50168.1| ATPase, FliI/YscN family [Desulfovibrio africanus str. Walvis Bay] Length = 436 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 140/320 (43%), Positives = 202/320 (63%), Gaps = 4/320 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 + GR ++A G P+DG D+ + + ++ P + R R+ + G+R ++ L Sbjct: 99 FLGRALDAFGAPLDGRDAPAP-EAYYPLHTEPPNPLTRPRINEPLDVGVRAVNALLTLGK 157 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVV 219 GQR+G+ AGSG+GKST++ M AR D +I+LVGERGREV EF+E LG + +K+SV+ Sbjct: 158 GQRVGIMAGSGVGKSTVMGMMARYTKADVNVIALVGERGREVVEFMERDLGPEGMKRSVL 217 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD SP++R A A +AE+F +G +VLL++DS+TRF + RE+ +GE P Sbjct: 218 VVATSDTSPLVRMRAAYAATAMAEFFRDQGKDVLLMMDSVTRFCMAGREVGLAAGEPPTR 277 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 G+ SVF+ LP+LLER G S K G+IT + +VLVDGD+ +P+AD+ RSILDGHIVL Sbjct: 278 GGFTPSVFAHLPKLLERAGKSAK--GSITGIYTVLVDGDDFTEPVADATRSILDGHIVLT 335 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LA+ G YP +D L SVSRL S + + +L + F+ D+ IG Y G Sbjct: 336 RELADAGHYPSIDVLKSVSRLRSDITSPEAQVAGRTLIRHMATFKRVEDMVNIGAYAQGS 395 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 + +DKA+ + I DFL+Q Sbjct: 396 NPEIDKALKMIGPINDFLRQ 415 >gi|330953278|gb|EGH53538.1| type III secretion component [Pseudomonas syringae Cit 7] Length = 442 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 148/374 (39%), Positives = 210/374 (56%), Gaps = 5/374 (1%) Query: 53 GKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK 111 G + +VI + D + P+G E +S + G+ + GRVI+ +G+ Sbjct: 55 GNGRELSAEVIGFDEDDAILSPIGSMEGLSTRTQIIATGQALGVQVGDALLGRVISPMGE 114 Query: 112 PIDGDDSLGKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170 +DG + L + PPA +RQR+ K G+R ID L GQR+G+F Sbjct: 115 FLDGPAPVVASGLQRYPLHAEPPAPFSRQRIVKPLSLGVRAIDSLLTLAQGQRMGIFGEP 174 Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPI 229 G+GKS+LL+ R+ D ++I L+GERGREVRE +E L + ++V VVATSD Sbjct: 175 GVGKSSLLASIVRNSNVDVIVIGLIGERGREVRELLEGQLDATARARTVAVVATSDRPAA 234 Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R A A T AEY +G +VLL++DS+TRFA + RE+ GE P RGYP S FS Sbjct: 235 ERVRAAYVATTQAEYHRDQGRSVLLLMDSLTRFARAQRELGLAVGEPPTRRGYPPSFFSA 294 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 LPRLLER GP G+ITA+ +VL +GD DP+A+ RSILDGHIVL+ LA+ +P Sbjct: 295 LPRLLERAGPGPS--GSITALYTVLTEGDASMDPVAEETRSILDGHIVLSADLAQRDHFP 352 Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409 +D L S SRL D + + ++L S + LI R EE + +G Y G D + D+A+ + Sbjct: 353 AIDVLRSRSRLMDHIATTEHRQLASRMRELIARREEIELLIQVGEYAAGSDPLADEAIAR 412 Query: 410 VPIIYDFLKQSPSD 423 I FL+Q ++ Sbjct: 413 HADIEAFLRQPATE 426 >gi|253996302|ref|YP_003048366.1| FliI/YscN family ATPase [Methylotenera mobilis JLW8] gi|253982981|gb|ACT47839.1| ATPase, FliI/YscN family [Methylotenera mobilis JLW8] Length = 482 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 143/328 (43%), Positives = 200/328 (60%), Gaps = 2/328 (0%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GRV++ G P+D + S + P M R +E+ G+R I+ + Sbjct: 137 ADLLGRVVDGAGNPLDDLGDIKPSQSSALNARPMNPLM-RAPIEEVLDVGVRAINSMLTV 195 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKS 217 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG + L +S Sbjct: 196 GRGQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVQEFIEQILGPEGLARS 255 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VVV A +D ++R A TIAE F ++G NVLLI+DS+TR+A + REIA GE P Sbjct: 256 VVVAAPADAPALMRLQGASYATTIAESFRNEGKNVLLIMDSLTRYAMAQREIALAIGEPP 315 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP SVF++LP L+ER G + +G+ITA +VL +GD+ DPIAD+ R+ILDGHIV Sbjct: 316 ATKGYPPSVFAKLPALVERAGNGRRGEGSITAFYTVLTEGDDQQDPIADAARAILDGHIV 375 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+RSLAE G YP +D S+SR S + +KL L L R+ + D+ +G Y Sbjct: 376 LSRSLAESGHYPAIDVEQSISRAMHNITSPEHQKLARKLKQLNSRYARSVDLINVGAYEA 435 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLS 425 G D +LD A+ + +I L+Q ++ S Sbjct: 436 GSDAVLDMAISKHELIERLLQQDVAERS 463 >gi|224370784|ref|YP_002604948.1| FliI [Desulfobacterium autotrophicum HRM2] gi|223693501|gb|ACN16784.1| FliI [Desulfobacterium autotrophicum HRM2] Length = 451 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 148/370 (40%), Positives = 213/370 (57%), Gaps = 10/370 (2%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC----WCGRVINALG 110 N + +VI D V + P G IS G + +P+ + GRVI+ +G Sbjct: 58 NREIKAEVIGFRDDKVLLMPYGDLRGISPGSRIIP---LEDTPAVAVGDAFLGRVIDGMG 114 Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170 P+DG + + + P M R+ +++ GI I+ PL GQR+ + AGS Sbjct: 115 APLDGKGKIPFTHKYPLYGNPINP-MERKTIKEPLDVGICAINTMIPLGRGQRVAIMAGS 173 Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPI 229 G+GKS L+ M + D +I+ L+GERGREV++F+ D LG + +++SVVV ATSD P+ Sbjct: 174 GVGKSVLMGMMTKHTTADVIILGLIGERGREVKDFVSDTLGKEGMERSVVVAATSDSPPL 233 Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 +R A T+AEYF +G NVLLI+DSITR+A S R++ +GE P +RGY S F + Sbjct: 234 VRMRGAYLATTLAEYFRDQGKNVLLIMDSITRYAMSSRDVGLAAGEPPTSRGYTPSFFVQ 293 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 +P LLER G E G+IT + +VLV+GD+ NDP+ D+VRSI+DGHIVL+R LA +G YP Sbjct: 294 IPVLLERAGYIEG-GGSITGIYTVLVEGDDMNDPVGDTVRSIVDGHIVLSRDLANKGHYP 352 Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409 +D LASVSR+ + +L +I D+ IG Y G D +D+A Sbjct: 353 AIDVLASVSRVMRDVSQPEHMELRKRAVDVIAAHRGAEDMISIGAYVDGSDARIDEAKRL 412 Query: 410 VPIIYDFLKQ 419 +P I FL+Q Sbjct: 413 MPKIDGFLRQ 422 >gi|320354320|ref|YP_004195659.1| type III secretion system ATPase, FliI/YscN [Desulfobulbus propionicus DSM 2032] gi|320122822|gb|ADW18368.1| type III secretion system ATPase, FliI/YscN [Desulfobulbus propionicus DSM 2032] Length = 459 Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 141/328 (42%), Positives = 203/328 (61%), Gaps = 7/328 (2%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPA-MNRQRVEKGFKTGIRVI 152 IS GRV++ + +P+D L L E + +PP M R + + GIR I Sbjct: 90 ISVGDGLLGRVLDGMAQPLDQGPPL---YLPHEKALYSLPPGPMQRDAITQPLDLGIRAI 146 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211 + GQR+G+ AGSG+GKS LL M A+ D +I+L+GERGREV+EFIE LG Sbjct: 147 NGLLTCGIGQRMGIMAGSGVGKSVLLGMMAKYAKADINVIALIGERGREVKEFIERDLGK 206 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 ++L SV+V TSD+SP+LR A IAEYF +G NVLL++DS+TRFA ++REI Sbjct: 207 ESLAHSVIVAVTSDQSPLLRMRGAFVATAIAEYFCQRGKNVLLMMDSVTRFAMAMREIGL 266 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 + GE P +GY SVF+ LP+LLER G + + +G+IT + +VLVDGD+ +P+ADSVRSI Sbjct: 267 SIGEPPTTKGYTPSVFATLPKLLERAG-NFQHQGSITGLYTVLVDGDDLTEPVADSVRSI 325 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHIVL+RS+A + YP +D + S SR+ ++ ++L ++ + E+ D+ Sbjct: 326 LDGHIVLSRSIAAKNHYPAIDVMMSTSRVMRDITTSRHRELAGKARSVMAIYRESEDLIN 385 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 IG Y G + +D A+ ++ I FL Q Sbjct: 386 IGAYATGSNKKIDYAISRMDAINAFLTQ 413 >gi|322833199|ref|YP_004213226.1| flagellar protein export ATPase FliI [Rahnella sp. Y9602] gi|321168400|gb|ADW74099.1| flagellar protein export ATPase FliI [Rahnella sp. Y9602] Length = 454 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 143/337 (42%), Positives = 201/337 (59%), Gaps = 7/337 (2%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPL 158 GRV++ KP+DG L D PP + R + G+R I+ + Sbjct: 115 LLGRVLDGSAKPLDG---LPPPDTGYRAALITPPFNPLQRTPITDVLDVGVRAINALLTV 171 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LGD + +S Sbjct: 172 GRGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERGREVKDFIENILGDEGRARS 231 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 232 VVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPP 291 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+V Sbjct: 292 ATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVV 351 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R LAE G YP +D AS+SR + V + L+ ++ RD+ +G Y Sbjct: 352 LSRRLAESGHYPAIDIEASISRAMTSLIDDAQYGRVRNFKQLLSSYQRNRDLISVGAYAA 411 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 G D +LD+A+ P + +FL+Q + S+ ED E+ Sbjct: 412 GSDPMLDRAIKLYPQMENFLQQDIMERSTYEDACLEL 448 >gi|299531258|ref|ZP_07044668.1| flagellar protein export ATPase FliI [Comamonas testosteroni S44] gi|298720665|gb|EFI61612.1| flagellar protein export ATPase FliI [Comamonas testosteroni S44] Length = 462 Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 154/413 (37%), Positives = 231/413 (55%), Gaps = 26/413 (6%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF---------------- 93 +HQ L +V+ + ++ P G + +S G +V F Sbjct: 50 IHQHGQEPVLAEVVGFAGERAFLMPAGDIQGLSSGAMVTPAAPFVPVPQLGVMETEKVSQ 109 Query: 94 -----RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKT 147 R+ GRV+++ G P+D LG + E++ + P AM+R V + T Sbjct: 110 TVGVLRLPMGDGLLGRVVDSQGIPLDHAGELGS--VVPEVLDRNPINAMDRDPVRESLDT 167 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G++ ++ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EF+E Sbjct: 168 GVKALNALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVE 227 Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 D LG + ++VVV A +D P+LR A IAE+F KG +VLL++DS+TR+A + Sbjct: 228 DILGAQDRSRAVVVAAPADAPPLLRMQGASYATAIAEHFRDKGKHVLLLMDSLTRYAMAQ 287 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REIA GE P +GYP S F++LP L+ER G G+ITA +VL +GD+ DPIAD Sbjct: 288 REIALAIGEPPATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIAD 347 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 + R+ILDGH+VL+R+LAE G YP +D S SR+ S + +L + R+++ Sbjct: 348 AARAILDGHVVLSRALAETGHYPAIDIEQSASRVMHNVVSREHFELARRFRAVYSRYQKG 407 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKLQ 438 RD+ +G Y PG D LD+A+ P + FL+QS + SS E + + +Q Sbjct: 408 RDLVQVGAYVPGSDPQLDEAIALQPAMTGFLQQSMFESSSMEQSLAGMAQAMQ 460 >gi|91776327|ref|YP_546083.1| ATPase FliI/YscN [Methylobacillus flagellatus KT] gi|91710314|gb|ABE50242.1| ATPase FliI/YscN [Methylobacillus flagellatus KT] Length = 472 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 140/321 (43%), Positives = 202/321 (62%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRVI+A G+P+D L + S+ + ++ ++R +E+ G+R I+ + Sbjct: 128 ALLGRVIDAAGRPLDELGPL-NSEHSVPLNTRPLNPLSRAPIEEVLDVGVRAINSMLTVG 186 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR + +++ L+GERGREV+EFIE LG + L ++V Sbjct: 187 RGQRMGLFAGSGVGKSVLLGMMARYTTAEVIVVGLIGERGREVKEFIEQILGPEGLARAV 246 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D ++R A IAEYF ++G +VLLI+DS+TR+A + REIA GE P Sbjct: 247 VVAAPADVPALMRLQGASYATAIAEYFRNQGKDVLLIMDSLTRYAMAQREIALAIGEPPA 306 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G + +G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 307 TKGYPPSVFAKLPALVERAGNGKPGEGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 366 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +RSLAE G YP +D S+SR S + +K L L R+ +D+ +G Y G Sbjct: 367 SRSLAESGHYPAIDIEQSISRAMHNITSPEHQKNARKLKQLNSRYTRNQDLINVGAYESG 426 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LD+A+ + I FL+Q Sbjct: 427 SDPVLDEAIMRHEAIEAFLQQ 447 >gi|194434949|ref|ZP_03067192.1| flagellar protein export ATPase FliI [Shigella dysenteriae 1012] gi|194416784|gb|EDX32910.1| flagellar protein export ATPase FliI [Shigella dysenteriae 1012] gi|332095522|gb|EGJ00538.1| flagellar protein export ATPase FliI [Shigella dysenteriae 155-74] Length = 457 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 139/321 (43%), Positives = 194/321 (60%), Gaps = 2/321 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGRE+++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGRELKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ PIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQAPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + + + L+ F+ RD+ +G Y G Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALINEQHYARMRTFKQLLSSFQRNRDLVSVGAYAKG 413 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D +LDKA+ P + +L+Q Sbjct: 414 SDPMLDKAIALWPQLEGYLQQ 434 >gi|329896196|ref|ZP_08271390.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium IMCC3088] gi|328921939|gb|EGG29305.1| Flagellum-specific ATP synthase FliI [gamma proteobacterium IMCC3088] Length = 443 Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 141/331 (42%), Positives = 198/331 (59%), Gaps = 9/331 (2%) Query: 95 ISPSACWCGRVINALGKPIDGD----DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 +S S GRVIN LG+ ID DS S SK+PP + + + + G+R Sbjct: 96 LSVSDDLLGRVINPLGEIIDSQQVTRDSRNATHFSG---SKIPP-LEKASINQPLDVGVR 151 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 VI+ + GQRIG+ AGSG+GKSTL++M + D VI+ L+GERGRE REFIED L Sbjct: 152 VINALLTMAKGQRIGLVAGSGVGKSTLMAMITKHTDADVVIVGLIGERGREAREFIEDTL 211 Query: 211 G-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G + L+K+++V+ATSD + ++R+ +AEYF KG NVLL+ DS+TR AH+ REI Sbjct: 212 GPEGLRKAIIVLATSDTTAVMRRRGAEVCHILAEYFRDKGQNVLLLCDSLTRVAHAQREI 271 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 GE P ++GYP SVF+ELP+L+ER G G+I+++ +VL + D DPI + R Sbjct: 272 GLAVGEPPTSKGYPPSVFTELPKLMERGGMGRPGSGSISSIYTVLAEYDEGMDPIVEIAR 331 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 + LDG I+L+R LA+ G YP +D S+SRLA K S + + +E+ +DI Sbjct: 332 ATLDGQIMLSRQLADAGHYPAIDLNGSISRLAAKVVSDEVLDAATRYRRYWSLYEQNKDI 391 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 IG Y+ G D LD AV + F +QS Sbjct: 392 INIGAYKSGADESLDVAVRMRSSMVKFARQS 422 >gi|332187915|ref|ZP_08389648.1| hypothetical protein SUS17_3044 [Sphingomonas sp. S17] gi|332012076|gb|EGI54148.1| hypothetical protein SUS17_3044 [Sphingomonas sp. S17] Length = 445 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 139/323 (43%), Positives = 194/323 (60%), Gaps = 2/323 (0%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 A GRV++ GKPIDG + +G + K+ ++R RV + G+R I+ Sbjct: 100 GAAMLGRVVDGSGKPIDGLGPI-RGAGRWPLAGKMQSPLDRGRVLEPLDVGVRAINGLLT 158 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKK 216 + GQR+G+ AGSG+GKS LL M R+ D ++I L+GER REV +F+E + G+ + Sbjct: 159 IGQGQRVGIMAGSGVGKSVLLGMMVRAAKADVIVIGLIGERSREVADFLETKVAGEARAR 218 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 SVVV ++ SP+LR L A IAE F ++G VLLI+DS+TR AH+ REI GE Sbjct: 219 SVVVAVPANHSPVLRIRGALRATAIAEAFRAEGKKVLLIMDSLTRVAHAGREIGLALGEP 278 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 ARGYP S + LP L+ER G G+ITA+ +VL DGD+ NDP+ DS RSILDGHI Sbjct: 279 ASARGYPPSAIAMLPNLIERAGADAHGTGSITAIYTVLADGDDGNDPVVDSARSILDGHI 338 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VLNR LAE G YP +D SVSR+ + + +L + +EE RD+ L+G YR Sbjct: 339 VLNRHLAERGVYPAIDIGPSVSRVMTDIVAKPHAQAARTLRRHLATYEENRDLVLMGAYR 398 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 G D +D A+ P + ++++Q Sbjct: 399 SGADPAIDAAIACHPAVMEYIRQ 421 >gi|157371190|ref|YP_001479179.1| flagellum-specific ATP synthase [Serratia proteamaculans 568] gi|157322954|gb|ABV42051.1| ATPase, FliI/YscN family [Serratia proteamaculans 568] Length = 453 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 140/338 (41%), Positives = 205/338 (60%), Gaps = 3/338 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ KP+DG + G + I + P + R +E+ G+R I+ + Sbjct: 114 ALLGRVLDGSAKPLDGLPAPETGYRAPLITAPFNP-LQRTPIEQVLDVGVRTINGLLTVG 172 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGPEGRARSV 232 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 292 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL Sbjct: 293 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVL 352 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + + V + ++ ++ RD+ +G Y G Sbjct: 353 SRRLAEAGHYPAIDIEASISRAMTSLIDEEHYRRVRNFKQMLASYQRNRDLISVGAYVSG 412 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITK 435 D +LDKA+ P + +L+Q + S +D Q++ + Sbjct: 413 SDPLLDKAMALYPQMEAYLQQGIFERSGYDDACQQLQQ 450 >gi|238918891|ref|YP_002932405.1| flagellum-specific ATP synthase [Edwardsiella ictaluri 93-146] gi|84663099|gb|ABC60081.1| EsaN [Edwardsiella ictaluri 93-146] gi|238868459|gb|ACR68170.1| flagellum-specific ATP synthase [Edwardsiella ictaluri 93-146] Length = 438 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 150/362 (41%), Positives = 217/362 (59%), Gaps = 7/362 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118 +V+ I D + P ++ G LV G + I S GRVI+ALG+P DG Sbjct: 59 AEVVAIEGDQALLSPYQPPLGLANGMLVTPLGAQACIGVSEALLGRVIDALGQPADGKPP 118 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + + S P M R ++ G+R ID + GQR+G+F+ +G GKSTLL Sbjct: 119 -AQATQWRSLDSPPPDPMQRAPIDTLLPMGVRAIDATLSVGVGQRLGIFSPAGCGKSTLL 177 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237 M A + D VI++L+GERGREVREF+E + L+ +SVV++ATSD + R A T Sbjct: 178 GMMATNSQADVVILALIGERGREVREFLEQIMSPELRARSVVILATSDRPALERIKAADT 237 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAEYF +G NVLL++DS+TR+A +IREIA +GE V+ GYP S+++ LPRLLER Sbjct: 238 ATVIAEYFRDRGHNVLLLVDSLTRYARAIREIALAAGEPTVSGGYPPSLYARLPRLLERA 297 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 GP+ G+ITA +VLV + +DP+A+ VRS+LDGHIVL+R LAE YP +D +AS+ Sbjct: 298 GPA--ACGSITAFYTVLV--EQKSDPLAEEVRSLLDGHIVLSRRLAEASHYPAIDIMASI 353 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + ++ + L HL+ ++E + +G YR G D D+A+ + I + L Sbjct: 354 SRVMSQIVTPQHRQAANRLRHLMATWQEIALLVRVGEYRAGQDTDADEAIARREAIDNLL 413 Query: 418 KQ 419 Q Sbjct: 414 CQ 415 >gi|297538197|ref|YP_003673966.1| flagellar protein export ATPase FliI [Methylotenera sp. 301] gi|297257544|gb|ADI29389.1| flagellar protein export ATPase FliI [Methylotenera sp. 301] Length = 510 Score = 249 bits (636), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 145/327 (44%), Positives = 202/327 (61%), Gaps = 6/327 (1%) Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ G P+D LGK S + ++ + R +E+ G+R I+ + Sbjct: 169 LGRVVDGAGNPLD---DLGKIVAAQSSPLNARPMNPLMRAPIEEILDVGVRAINSMLTVG 225 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EFIE LG L +SV Sbjct: 226 RGQRMGLFAGSGVGKSVLLGMMARYTTADVIVVGLIGERGREVQEFIEQILGPVGLARSV 285 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VV A +D ++R A TIAE F +G NVLLI+DS+TR+A + REIA GE P Sbjct: 286 VVAAPADAPALMRLQGANYATTIAENFRDQGKNVLLIMDSLTRYAMAQREIALAIGEPPA 345 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G ++ +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL Sbjct: 346 TKGYPPSVFAKLPALVERTGNGKRGEGSITAFYTVLTEGDDQQDPIADAARAILDGHIVL 405 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +RSLAE G YP +D S+SR S + +KL L L R+ + D+ +G Y G Sbjct: 406 SRSLAESGHYPAIDVEQSISRAMHNITSPEHQKLARKLKQLNSRYMRSVDLINVGAYEAG 465 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLS 425 D +LD+A+ + I FL+Q S+ S Sbjct: 466 SDAVLDQAIARHDKIDAFLQQGISERS 492 >gi|307944363|ref|ZP_07659704.1| flagellum-specific ATP synthase [Roseibium sp. TrichSKD4] gi|307772709|gb|EFO31929.1| flagellum-specific ATP synthase [Roseibium sp. TrichSKD4] Length = 455 Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 152/380 (40%), Positives = 225/380 (59%), Gaps = 13/380 (3%) Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLG 120 VI ++ + V + P G + +S+ V GR ++P GRV++A G+ +DG + + Sbjct: 80 VIGMDKNEVILVPSGSIDGLSVRAQVVRTGRQPMAPCGKDLLGRVVDAFGEALDGKEKI- 138 Query: 121 KGDLSMEIMSKVPP-AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + + PP AM R ++ F+T IR ID + GQRIG+F +G+GKS LLS Sbjct: 139 ---TTFTDLKRDPPQAMKRTIIDTPFETRIRAIDGMLTIGRGQRIGIFGSAGVGKSVLLS 195 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 + D +++ L+GERGREV EFI++ LG + LKK+ + VAT+D P R A +A Sbjct: 196 EIIKGALVDVIVVGLIGERGREVAEFIQNNLGAEGLKKACLFVATADRPPAERLRAAYSA 255 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 AE F +G +VLL++DS TR A + REI +GELPV RG+P S F+ LP LLER G Sbjct: 256 TAAAEQFRDEGLSVLLLIDSATRVARATREIGLAAGELPVRRGFPPSTFTLLPELLERAG 315 Query: 299 PSEKEKGNITAVISVLVDGDNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 S +KG ITA+ +VLV+GDN + DP+AD +RS+LDGHI+L+R LA + YP +D S Sbjct: 316 TS--DKGAITAIYTVLVEGDNDDADPVADELRSLLDGHIILSRKLAAKNHYPAIDVSRSK 373 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ A+ S L I + E + +G Y+PG D + D AV + I++FL Sbjct: 374 SRVMGAVVDAEHGASASKLGSYIAKLNEIELLLQVGEYKPGGDPLADIAVEKQSEIFEFL 433 Query: 418 KQSPSDLSSEDVFQEITKKL 437 +Q+P + + FQ+ +L Sbjct: 434 QQTPGEFTD---FQDSKSRL 450 >gi|218887379|ref|YP_002436700.1| flagellar protein export ATPase FliI [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758333|gb|ACL09232.1| flagellar protein export ATPase FliI [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 468 Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 142/333 (42%), Positives = 205/333 (61%), Gaps = 5/333 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR +A G P+D + ++ + + P + R R+ G+RVI+ L GQ Sbjct: 133 GRAFDAFGAPLDSGAHVVTTGVA-PLYASPPNPLARPRISDPLDVGVRVINSLLTLGKGQ 191 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 R+G+ AGSG+GKSTL+ M AR D +I L+GERGREV EF+E LG + + +SV++V Sbjct: 192 RVGIMAGSGVGKSTLMGMMARYTVADVNVIGLIGERGREVVEFMEKDLGPEGMARSVLIV 251 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD+SP++R A A +AE+F +G +VLL++DS+TRFA + RE+ GE P +G Sbjct: 252 ATSDQSPLVRMRAAYAATAVAEFFRDQGKDVLLMMDSVTRFAMAAREVGLAVGEPPTTKG 311 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y +VF++LP+LLER G S EKG IT + +VLVDGD+ N+PIAD+VRSILDGHIVL R Sbjct: 312 YTPTVFAQLPKLLERAGRS--EKGTITGIYTVLVDGDDFNEPIADAVRSILDGHIVLTRD 369 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G +P +D L S+SRL + + +T + F + D+ IG Y G + Sbjct: 370 LADMGHFPAIDVLRSISRLRSDICAKNVVDAGRVITRHLATFRKAEDMINIGAYAQGSNP 429 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 +DKA+ I FL+Q +D + D F ++ Sbjct: 430 DIDKAIAMNGPINAFLRQDVTDAAPLADSFAQL 462 >gi|238920314|ref|YP_002933829.1| flagellum-specific ATP synthase [Edwardsiella ictaluri 93-146] gi|238869883|gb|ACR69594.1| flagellum-specific ATP synthase, putative [Edwardsiella ictaluri 93-146] Length = 452 Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 139/324 (42%), Positives = 195/324 (60%), Gaps = 8/324 (2%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GRV++ +P+DG D G LS + + + R + + G+R I+ Sbjct: 112 ALLGRVLDGSARPLDGLPPPDESDHGGLSSQPFNP----LQRTPITQVLDVGVRAINALL 167 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LGD + Sbjct: 168 TVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGDEGRQ 227 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE Sbjct: 228 RSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGE 287 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH Sbjct: 288 PPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGH 347 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 +VL+R LAE G YP +D AS+SR V S L+ ++ RD+ +G Y Sbjct: 348 VVLSRRLAEAGHYPAIDIEASISRAMTSLIDEAHYARVRSFKQLLSSYQRNRDLISVGAY 407 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G D +LD+A+ P + FL+Q Sbjct: 408 ARGSDPLLDQAIALYPQLEAFLQQ 431 >gi|302185362|ref|ZP_07262035.1| FliI/YscN family ATPase [Pseudomonas syringae pv. syringae 642] Length = 454 Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 157/431 (36%), Positives = 236/431 (54%), Gaps = 25/431 (5%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78 VV G +S++ + + C V +GD V++ L +++ D + +G Sbjct: 28 VVVSGRVSAVNGIL--LECQVPAVRIGDLCRVYKTGGESMLAEIVGFTEDCALLSALGTP 85 Query: 79 EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME---------I 128 E I G + G +S G V++ G+ +DG G G ++ I Sbjct: 86 EGIEQGARIEPLGVSHSVSVDDSLLGSVLDGFGRRLDGQ---GDGAFALPGEHRPTQPVI 142 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 +PP R R+ TG+R ID L GQR+G+FAG+G GK+TLL+ AR+ D Sbjct: 143 CDAIPPT-QRPRIADAMPTGLRAIDAAITLGEGQRVGLFAGAGCGKTTLLAELARNMPCD 201 Query: 189 KVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 ++ L+GERGRE+REF++ L D L+ +SV+V ATSD S + R A T IAE + Sbjct: 202 VIVFGLIGERGRELREFLDHELDDELRARSVLVCATSDRSSMERARAAFTTTAIAEAYRQ 261 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGN 306 G VLL++DS+TRFA + REI +GE P+ RG P SV++ LPRL+ER G SE+ G+ Sbjct: 262 SGKRVLLLIDSLTRFARAQREIGIAAGE-PLGRGGLPPSVYTLLPRLVERAGRSEQ--GS 318 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA+ +VL++ D+ NDP+AD VRS++DGHIV++R LAE G YP +D AS+SR+ Sbjct: 319 ITAIYTVLIEQDSMNDPVADEVRSLIDGHIVMSRKLAERGHYPAIDVQASLSRITSSVTD 378 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 ++ +L L+ +++ + +G Y PG D + D AV I FL+Q +L Sbjct: 379 RQHQRGNVTLRRLLAAYQQVEMLLRLGEYTPGNDTMTDCAVQLHEQINGFLQQ---ELRE 435 Query: 427 EDVFQEITKKL 437 Q+ +L Sbjct: 436 PQALQDTLHQL 446 >gi|116514989|ref|YP_802618.1| hypothetical protein BCc_046 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256843|gb|ABJ90525.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 457 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 156/439 (35%), Positives = 252/439 (57%), Gaps = 22/439 (5%) Query: 15 YSKNL--VVQGGYISSITSVYYTVTCLSQ-YVCLGDFV----VHQGKNSDNLGQVIRINL 67 + KNL + YI + SV+ + ++ Y +G++ ++G S + +V+ Sbjct: 15 FEKNLLNISNSIYIGKVLSVHSLIIEVTGIYSSIGEYCWVECFYKGIQSTIICKVMGFKK 74 Query: 68 DIVYICPVGIGEEISLGDLVFHWG-------RFRISP-SACWCGRVINALGKPID--GDD 117 I ++ P+ I G VF +F+ P + GRV+N G P+D GD Sbjct: 75 KIFFLIPIQNSYGIFPGAKVFSENYIFNKDIKFQYFPFGSKLLGRVLNGFGHPLDNLGDL 134 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 +L K + + P +NR+ + + TG+ I+ + GQR+G+F+ +GIGKS L Sbjct: 135 NLKKKLFNFFKKKPINP-LNRKPITEILDTGVCAINSLLTVGRGQRMGIFSQAGIGKSML 193 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 L M +R D +++SLVGERGREV++FI++ LG D+LKKSVV+V+++D SP+ + + Sbjct: 194 LGMISRHTDADIIVVSLVGERGREVKDFIDNILGKDSLKKSVVIVSSADVSPMFKIQSVE 253 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +AEYF +KG+NVLLI+DS+TR+A + RE++ + E+PV R YP S+FS +P L+ER Sbjct: 254 YATAVAEYFCNKGNNVLLIVDSLTRYAMAYREVSNSLYEIPVKR-YPASIFSNIPYLIER 312 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + + G+IT+ ++L +GD +NDPI D +S+LDGHI+L+ L+E G YP ++ S Sbjct: 313 TGNIDNKSGSITSFYTILTEGDEYNDPILDITKSVLDGHIILSNVLSESGHYPAINIEKS 372 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SRL D + + LI + + DI +G Y G + +LD+A+ P + F Sbjct: 373 ISRLMSSIVDHDHYQYSIYIKKLISCYYKNYDIINLGVYTSGKNKLLDQAITLWPFLEKF 432 Query: 417 LKQSPSDLSSEDVFQEITK 435 L+Q D + + Q I K Sbjct: 433 LQQKFLDCCTYN--QSILK 449 >gi|114777408|ref|ZP_01452405.1| flagellum-specific ATP synthase [Mariprofundus ferrooxydans PV-1] gi|114552190|gb|EAU54692.1| flagellum-specific ATP synthase [Mariprofundus ferrooxydans PV-1] Length = 471 Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 151/368 (41%), Positives = 216/368 (58%), Gaps = 9/368 (2%) Query: 72 ICPVGIGEEISLGDLVFHWG---RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 + PVG I+ GD + R+ P GRV++A G P+D G L Sbjct: 76 LMPVGSTRGIAPGDPIEPLSTTPSIRVGPH--LLGRVLDAQGNPMDEYALSNLGTLFPLH 133 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 +++ P R ++ + G+R ID P+ GQR+G+FAG+G+GKSTLL M AR+ + Sbjct: 134 GTRLNP-FTRHTIDAPMQLGVRAIDACMPMGWGQRMGLFAGAGVGKSTLLGMLARNSDAE 192 Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +I+LVGER REVREF++ LG + L+ SVV+VATSD P+LR A A TIAE F Sbjct: 193 VNVIALVGERSREVREFLDQALGSEALQHSVVIVATSDMPPVLRVRAAHMATTIAEAFRE 252 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G VLL++DS+TR A + REI GE P ++GY S FS L LLER GP + G+I Sbjct: 253 QGKRVLLLMDSLTRVAQAQREIGLMLGEPPASKGYTPSCFSILAELLERSGPGTAQGGDI 312 Query: 308 TAVISVLVDGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 +A +VLV+GD+ DPIADS S+LDGHI+L+R LAE+G +P ++ L S+SRL + + Sbjct: 313 SAFYTVLVEGDDMRADPIADSAMSVLDGHILLDRKLAEQGHFPAINVLRSISRLDTQLMN 372 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 ++ + L + FE D+ IG Y G + LD + + I FL+Q+ + S+ Sbjct: 373 NEQMQAARMLRRKMSIFERMEDMISIGAYEQGSNPELDNIIDNLQEIKGFLQQTSNSCSA 432 Query: 427 -EDVFQEI 433 ED Q + Sbjct: 433 REDSAQRL 440 >gi|300310125|ref|YP_003774217.1| type III secretion ATP synthase [Herbaspirillum seropedicae SmR1] gi|300072910|gb|ADJ62309.1| type III secretion ATP synthase protein [Herbaspirillum seropedicae SmR1] Length = 460 Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 133/311 (42%), Positives = 191/311 (61%), Gaps = 6/311 (1%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 ++ PPA +R R+ TG+R ID + GQRIGVFAG G GK+TL++ AR Sbjct: 150 VIRDAPPATSRPRIATPLPTGVRAIDGLLTMGMGQRIGVFAGPGCGKTTLMAAIARGCQA 209 Query: 188 DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 + ++ L+GERGRE+ EF++ L L +K+VVV ATSD + + R A TA IAE F Sbjct: 210 EAIVFGLIGERGRELNEFLDHELDAELIRKTVVVCATSDRTSMERSRAAFTATAIAEGFR 269 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G VLL++DS+TRFA + REI +GE P G+ SV++ LPRL+ER G + + G+ Sbjct: 270 DRGMKVLLLVDSLTRFARAQREIGLAAGEPPARGGFTPSVYTMLPRLIERAGGTPQ--GS 327 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA+ +VLVDG++ +DPI D +S+LDGHI+L R LAE+G YP +D LAS+SR+ S Sbjct: 328 ITAMYTVLVDGESSSDPIGDEAKSLLDGHILLTRKLAEQGHYPAIDVLASISRVMSNVTS 387 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + ++ S L+ R++E + +G Y+ G D + D+A+ P FL+Q D S Sbjct: 388 REHRRAASRFRELLARYQEMELLIRLGEYKSGADPVADRAMELRPEQLSFLRQ---DTSG 444 Query: 427 EDVFQEITKKL 437 FQE L Sbjct: 445 SADFQETLDTL 455 >gi|269139490|ref|YP_003296191.1| flagellum-specific ATP synthase [Edwardsiella tarda EIB202] gi|267985151|gb|ACY84980.1| flagellum-specific ATP synthase [Edwardsiella tarda EIB202] gi|304559379|gb|ADM42043.1| Flagellum-specific ATP synthase FliI [Edwardsiella tarda FL6-60] Length = 452 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 142/343 (41%), Positives = 202/343 (58%), Gaps = 11/343 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GRV++ +P+DG D G LS + + + R + + G+R I+ Sbjct: 112 ALLGRVLDGSARPLDGLQPPDESDHGGLSSQPFNP----LQRTPITQVLDVGVRAINALL 167 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG+ + Sbjct: 168 TVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGEEGRQ 227 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE Sbjct: 228 RSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGE 287 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH Sbjct: 288 PPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGH 347 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 +VL+R LAE G YP +D AS+SR V S L+ ++ RD+ +G Y Sbjct: 348 VVLSRRLAEAGHYPAIDIEASISRAMTSLIDEAHYARVRSFKQLLSSYQRNRDLISVGAY 407 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 G D +LD+A+ P + FL+Q + S +Q+ LQ Sbjct: 408 ARGSDPLLDQAIALYPQLEAFLQQGIFERSD---YQQACTALQ 447 >gi|153005077|ref|YP_001379402.1| FliI/YscN family ATPase [Anaeromyxobacter sp. Fw109-5] gi|152028650|gb|ABS26418.1| ATPase, FliI/YscN family [Anaeromyxobacter sp. Fw109-5] Length = 434 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 139/319 (43%), Positives = 192/319 (60%), Gaps = 4/319 (1%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ LG+P+DG L + P + R+R+ G+R ID + G Sbjct: 99 LGRVLDGLGRPLDGL-PLPASLEEWAVDRPAPGPLARRRITAPLALGVRAIDGLLTVGEG 157 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QRIG+FAG+G+GKSTLL AR + +I LVGERGREVREF+E+ LG + L +SVVV Sbjct: 158 QRIGIFAGAGVGKSTLLGQIARHTRAELSVICLVGERGREVREFVEEALGPEGLARSVVV 217 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 ATSD + R A A IAE+F+ + VL +LDS+TR+A + RE+ +GE P Sbjct: 218 AATSDAPALERLKAAHVATGIAEWFAERDRRVLFMLDSLTRYARAQREVGLAAGEPPARH 277 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF+ LPRLLER G + +G ITA+ +VLV G + ++PIAD VR ILDGH+VL+ Sbjct: 278 GYPPSVFAALPRLLERTG--NRARGGITALYTVLVAGGDLDEPIADEVRGILDGHVVLDP 335 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +A GRYP +D L S+SR+ + + L L+ E RD+ +G Y G D Sbjct: 336 RVAAAGRYPAIDVLRSLSRVMPAVTTDSHRAAADRLRALLAAHERHRDLIAVGAYARGSD 395 Query: 401 LILDKAVHQVPIIYDFLKQ 419 D+A+ ++P I FL+Q Sbjct: 396 PDADEALARLPAIEAFLRQ 414 >gi|321472575|gb|EFX83544.1| hypothetical protein DAPPUDRAFT_100109 [Daphnia pulex] Length = 411 Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 154/380 (40%), Positives = 216/380 (56%), Gaps = 39/380 (10%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108 +H+ LG+V+ D I P G+ E + G V G +I P+ W GRVI A Sbjct: 54 IHKEDADPILGEVVGFRNDTSLIMPYGMLEGVRPGARVDVIGDGLKIYPTMAWKGRVIGA 113 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG+P+D L +GD + ++ S PA R R +K G+R ++ FT C GQRIG+F+ Sbjct: 114 LGEPLDDLGPLPQGDQAYDLKSSPSPARTRLRTKKRIDLGVRALNTFTTCCRGQRIGIFS 173 Query: 169 GSGIGKSTLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDE 226 GSG+GKS LL R +DC D V++ L+GERGREV +FIE+ LG + LK++VVVVATSD Sbjct: 174 GSGVGKSVLLGQITRFTDC-DVVVVGLIGERGREVNDFIEEQLGPEGLKRAVVVVATSD- 231 Query: 227 SPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 +P L+ + D +L+S LP G P +V Sbjct: 232 APALQ-------------LKERSD---FLLES-----------------LPRQEGNPPTV 258 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 FSELPRLLER G + E G+IT + +VLV+GD+HN+PIAD+ RSILDGHIVL RS+AE G Sbjct: 259 FSELPRLLERAGTTHHE-GSITGIFNVLVEGDDHNEPIADATRSILDGHIVLERSIAERG 317 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 RYP V+ L S+SR +E +VS L+ +++ ++ +G YR G +D+A Sbjct: 318 RYPAVNILKSLSRTMPDCNDLEESAVVSRARKLMAIYDDMSEMIQLGTYRHGSSPEVDEA 377 Query: 407 VHQVPIIYDFLKQSPSDLSS 426 + P + FL Q + S+ Sbjct: 378 IRLFPKLSTFLSQGKEEKST 397 >gi|289548013|ref|YP_003473001.1| ATPase, FliI/YscN family [Thermocrinis albus DSM 14484] gi|289181630|gb|ADC88874.1| ATPase, FliI/YscN family [Thermocrinis albus DSM 14484] Length = 425 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 147/416 (35%), Positives = 240/416 (57%), Gaps = 11/416 (2%) Query: 26 ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85 ++ ++ VY V + +GD V+ + + + G++I ++ D I P G + +GD Sbjct: 11 VTKVSGVY--VEAFNVEGAVGDRVIIKTVDGEREGEIIGLHEDRCIIMPFGSMMGVKVGD 68 Query: 86 LVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 V G + G V++ G+ + +G+ + ++ + P + R+R+ + Sbjct: 69 KVLITGEKVHTFTGDRVIGAVLDPFGRSLTDGRVVGEEKIRVDFVDVNP--LERERIREV 126 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVRE 204 G+R ++ L GQ++GVFAG+G+GKSTLL M R D V+++L+GERGREVRE Sbjct: 127 LDCGVRSVNALLTLGKGQKVGVFAGAGVGKSTLLGMITRWAQVDVVVLALIGERGREVRE 186 Query: 205 FIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 F+ED LG + ++SVVVV TSD++PI++ ++AV A YF+ +G +VLLI+DS+TRFA Sbjct: 187 FLEDVLGEEGRRRSVVVVTTSDQTPIMKVKGAISAVAHARYFAGRGKDVLLIMDSLTRFA 246 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HND 322 + REI +GE P +GY SVF RL+E G + G+IT + SVLV+GD+ H D Sbjct: 247 MAQREIGLAAGEPPTLKGYTPSVFHMCARLVESCGKFVR-GGSITGIFSVLVEGDDLHTD 305 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 P+AD++ +LDGHIVL+R A G YP VDP+ S+SR+ + D ++ + ++ Sbjct: 306 PVADALLGMLDGHIVLSRKRASSGLYPAVDPVRSLSRVMPHLVTEDHMRMALHIRDVLSV 365 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 ++ ++ +G YR G + +DK + I F Q P+++ FQE + L+ Sbjct: 366 YDAMEEVVHVGLYRQGSNPFVDKVIKHRDEIRSFFHQ-PAEVKVS--FQESVEALR 418 >gi|320175469|gb|EFW50568.1| Flagellum-specific ATP synthase FliI [Shigella dysenteriae CDC 74-1112] gi|320184479|gb|EFW59283.1| Flagellum-specific ATP synthase FliI [Shigella flexneri CDC 796-83] gi|332096920|gb|EGJ01909.1| flagellum-specific ATP synthase [Shigella boydii 3594-74] Length = 308 Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 133/285 (46%), Positives = 180/285 (63%), Gaps = 1/285 (0%) Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 M R +E TG+R I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+ Sbjct: 1 MQRTPIEHVLDTGVRPINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLI 60 Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREV++FIE+ LG + +SVV+ A +D SP+LR A IAE F +G +VLL Sbjct: 61 GERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLL 120 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 I+DS+TR+A + REIA GE P +GYP SVF++LP L+ER G G+ITA +VL Sbjct: 121 IMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVL 180 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 +GD+ DPIADS R+ILDGHIVL+R LAE G YP +D AS+SR S V Sbjct: 181 TEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASISRAMTALISEQHYARVR 240 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + L+ F+ RD+ +G Y G D +LDKA+ P + +L+Q Sbjct: 241 TFKQLLSSFQRNRDLVSVGAYAKGSDPMLDKAIALWPQLEGYLQQ 285 >gi|1648933|gb|AAB17681.1| putative ATPase [Sinorhizobium fredii] Length = 450 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 137/339 (40%), Positives = 199/339 (58%), Gaps = 4/339 (1%) Query: 88 FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147 HW + GRVI++ +P+DG + ++ + +VP M R+ VE+ F Sbjct: 101 LHWRMREVPIGPDLLGRVIDSRCRPLDGKCEVKTTEVR-PLHGRVPNPMTRRMVERPFPL 159 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G+R +D GQRIG++ G GKSTL+S + D I +L+ +RGREVREF+E Sbjct: 160 GVRALDGLLTCGEGQRIGIYGEPGGGKSTLISQIVKGAAADVFIFALICQRGREVREFVE 219 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 +LG+ L++++VVV TSD S R A +AEYF +G V L+LDS+TRF ++ Sbjct: 220 RHLGEEGLRRAIVVVETSDRSATERAQCAPMATALAEYFREQGLRVALLLDSLTRFCRAM 279 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REI +GE P RG+P SVF+ LP LLER G E+ G+ITA +VLV+GD DPIA+ Sbjct: 280 REIGLAAGEPPTRRGFPPSVFAALPGLLERAGMGER--GSITAFYTVLVEGDGTGDPIAE 337 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 R I+DGHIVL+R+LA +P +D L S SR+ D S +K S L+ R+ E Sbjct: 338 ESRGIVDGHIVLSRALAARSHFPAIDVLQSRSRVMDAVVSETHRKAASFFRDLLARYAEC 397 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + +G Y+ G D + D+AV + + +FL+QS ++S Sbjct: 398 EFLINVGEYKQGGDPLTDRAVASIGELKEFLRQSEDEVS 436 >gi|220935135|ref|YP_002514034.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN [Thioalkalivibrio sp. HL-EbGR7] gi|219996445|gb|ACL73047.1| flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN [Thioalkalivibrio sp. HL-EbGR7] Length = 460 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 134/341 (39%), Positives = 204/341 (59%), Gaps = 9/341 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTP 157 GRV++ G+P+DG L D + P + R+ + + G+R I+ Sbjct: 118 ALLGRVLDGAGRPLDG---LPPPDCEASVSLNGRPLNPLARRPIHEPLDVGVRAINGLLT 174 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKK 216 + GQR+G+FAGSG+GKS LL M R D ++ L+GERGREV EF+++ LG + + + Sbjct: 175 VGRGQRMGLFAGSGVGKSVLLGMMTRYTNADVTVVGLIGERGREVNEFVQNILGPEGMAR 234 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +VVV +D P++R + A +IAEYF +G NVLL++DS+TRFA + REI+ GE Sbjct: 235 AVVVAVPADHPPLMRLHGAMLATSIAEYFRDQGLNVLLLMDSLTRFAQAQREISLAIGEP 294 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P +GY SVF+ LP L+ER G S++ +G +TA +VL +GD+ NDPIAD+ R+ILDGH+ Sbjct: 295 PATKGYTPSVFARLPHLVERAGNSDRGEGTMTAFYTVLTEGDDQNDPIADAARAILDGHV 354 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R +AE GRYP +D ASVSRL ++ + + + +++ RD+ +G Y+ Sbjct: 355 VLSRRIAEAGRYPAIDIEASVSRLMNEIADPGQIQAARLFKQIYATYQQNRDLISVGAYQ 414 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 G D +D A+ P + +L Q D+ F+E + L Sbjct: 415 KGADPRVDAAIQYYPHLEQYLSQ---DMREAVDFKESLRAL 452 >gi|221069295|ref|ZP_03545400.1| ATPase FliI/YscN [Comamonas testosteroni KF-1] gi|220714318|gb|EED69686.1| ATPase FliI/YscN [Comamonas testosteroni KF-1] Length = 462 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 152/400 (38%), Positives = 228/400 (57%), Gaps = 25/400 (6%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF---------------- 93 +HQ L +V+ + ++ P G + +S G +V F Sbjct: 50 IHQHGQEPVLAEVVGFAGERAFLMPAGDIQGLSSGAMVTPAAPFVPVPQLGVAETEKVRQ 109 Query: 94 -----RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKT 147 R+ GRV+++ G P+D +L +G + E++ + P AM+R V + T Sbjct: 110 TVGVLRLPMGDGLLGRVVDSQGIPLDRGPAL-EGVVP-EVLDRNPINAMDRDPVRESLDT 167 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G++ ++ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EF+E Sbjct: 168 GVKALNSLLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVE 227 Query: 208 DYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 D LG + ++VVV A +D P+LR A IAE+F KG +VLL++DS+TR+A + Sbjct: 228 DILGAQDRSRAVVVAAPADAPPLLRMQGASYATAIAEHFRDKGKHVLLLMDSLTRYAMAQ 287 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REIA GE P +GYP S F++LP L+ER G G+ITA +VL +GD+ DPIAD Sbjct: 288 REIALAIGEPPATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIAD 347 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 + R+ILDGH+VL+R+LAE G YP +D S SR+ S + +L + R+++ Sbjct: 348 AARAILDGHVVLSRALAETGHYPAIDIEQSASRVMHNVVSREHFELARRFRAVYSRYQKG 407 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 RD+ +G Y PG D LD+A+ P + FL+QS + SS Sbjct: 408 RDLVQVGAYVPGSDPQLDEAIALQPAMTGFLQQSMFESSS 447 >gi|84514813|ref|ZP_01002176.1| FliI, Flagellum-specific ATPase [Loktanella vestfoldensis SKA53] gi|84510972|gb|EAQ07426.1| FliI, Flagellum-specific ATPase [Loktanella vestfoldensis SKA53] Length = 444 Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 132/328 (40%), Positives = 194/328 (59%), Gaps = 9/328 (2%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 + GR ++ LG P+D D + + + + R+++ G+R ++ + Sbjct: 104 YLGRTVDGLGWPLD-DAPAPQVSAQAPLNGTLVNPLARRQIPGPLDVGVRAVNGLLTIGC 162 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV 220 GQRIG+ AGSG+GKS LL M AR D V+I L+GER REV E + + + V + Sbjct: 163 GQRIGIIAGSGVGKSVLLGMMARYTSADVVVIGLIGERAREVGEMVRAIMQPATRGKVSI 222 Query: 221 VAT-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 +A +D SP+LR A +AE+F +G NVLLI+DS+TR AH+ REI GE P + Sbjct: 223 IAVPADRSPLLRIRGARRATALAEHFRDQGKNVLLIMDSLTRVAHAQREIGLALGEAPTS 282 Query: 280 RGYPTSVFSELPRLLER----IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +GYP SV S +P L+ER +GP+ G+IT + +VL DGD+ NDP+ D+ R+ILDGH Sbjct: 283 KGYPASVISMIPNLIERAGMGVGPN---AGSITGIYTVLADGDDSNDPVVDTARAILDGH 339 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL+RS+A+ G YP +D AS+SR+ + ++K L+ + E RD+ L+GGY Sbjct: 340 IVLSRSIAQMGVYPAIDIPASISRVMNDIVPLSQQKAARKFKRLVSLYNENRDLMLMGGY 399 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSD 423 G D LD+AV P + D++ QSP D Sbjct: 400 VSGQDADLDQAVALWPKLVDYISQSPDD 427 >gi|195953025|ref|YP_002121315.1| ATPase, FliI/YscN family [Hydrogenobaculum sp. Y04AAS1] gi|195932637|gb|ACG57337.1| ATPase, FliI/YscN family [Hydrogenobaculum sp. Y04AAS1] Length = 425 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 138/343 (40%), Positives = 211/343 (61%), Gaps = 13/343 (3%) Query: 98 SACWCGRVINALGKPIDGDD-----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 S + G+V++ G I D+ SL K LS+E S M R+++ K F +G+R I Sbjct: 81 SEEFLGKVLDPFGNIIHSDNTKSVKSLKKLPLSLENHS----PMERKKISKIFDSGVRTI 136 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 + T + GQRIGVFAG+G+GK+T L M + D V+++L+GERGREVRE++ED LG+ Sbjct: 137 NALTTIGIGQRIGVFAGAGVGKTTTLGMIMKHSYSDVVVLALIGERGREVREYVEDILGE 196 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 +KSVV+V+TSD++PI++ ++A+ A +F+SKG NVLL++DS+TR A + REI + Sbjct: 197 AFEKSVVIVSTSDQTPIMKVKGAISALVHARFFASKGYNVLLVMDSLTRLAMAQREIGLS 256 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN-DPIADSVRSI 331 GE P +GY SVF + +++E G IT + SVLV+GD+ + DPIADS S Sbjct: 257 VGEPPTLKGYTPSVFLTMSKIIEGCGLVGDY--GITGIFSVLVEGDDTSLDPIADSAMSF 314 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHI+L+R +A+ G YP +DPL S+SR+ S + V ++ + DI Sbjct: 315 LDGHILLSRKIADSGIYPAIDPLKSISRIMPNIVSDEHWDYVLKFKQILSEYYSMEDIIK 374 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSP-SDLSSEDVFQEI 433 +G YR G + +DK + + I +F Q+P + ++ + QE+ Sbjct: 375 VGLYRKGSNPTIDKVLERKSDIDNFFMQNPKTGINYNNSLQEL 417 >gi|294636873|ref|ZP_06715203.1| flagellar protein export ATPase FliI [Edwardsiella tarda ATCC 23685] gi|291089903|gb|EFE22464.1| flagellar protein export ATPase FliI [Edwardsiella tarda ATCC 23685] Length = 452 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 149/380 (39%), Positives = 216/380 (56%), Gaps = 16/380 (4%) Query: 51 HQGKNS-DNLGQVIRINLDIVYICPV----GI--GEEISLGDLVFHWGRFRISPSACWCG 103 H G+ D +V+ N +++ P+ GI G + H G+ ++ G Sbjct: 57 HDGQQIIDVEAEVVGFNGRQLFLMPLEEVDGIVPGARVWAPAAALHSGK-QLPLGPALLG 115 Query: 104 RVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 RV++ +P+DG D G LS + + + R + + G+R I+ + Sbjct: 116 RVLDGSARPLDGLPPPDESDHGGLSSQPFNP----LQRTPITQVLDVGVRAINALLTVGR 171 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG+ K+SVV Sbjct: 172 GQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGEEGRKRSVV 231 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 + A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 232 IAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPAT 291 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL+ Sbjct: 292 KGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVLS 351 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R LAE G YP +D AS+SR V L+ ++ RD+ +G Y G Sbjct: 352 RRLAEAGHYPAIDIEASISRAMTSLIDEAHYVRVRRFKQLLSSYQRNRDLISVGAYARGS 411 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 D +LD+A+ P + FL+Q Sbjct: 412 DPLLDQAIALYPQLEAFLQQ 431 >gi|167842297|ref|ZP_02468981.1| type III secretion system ATPase [Burkholderia thailandensis MSMB43] Length = 445 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 148/371 (39%), Positives = 207/371 (55%), Gaps = 4/371 (1%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 +V+ I D + P I+ G V GR RI GRV++ LG+ D Sbjct: 63 AEVVSIEGDTALLSPFAEPRGIAAGCAVRPLGRAHRIPVGTFLLGRVVDGLGRLFDHGPD 122 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + +++ P + R ++ G+R ID GQR+G+FA +G GKSTLL Sbjct: 123 VPDSATWVDLARSAPDPLRRAIIDTPLPLGVRAIDGLLTCGRGQRVGIFAAAGGGKSTLL 182 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLT 237 M D +++L+GERGREVREF+E L + +++VVVATSD + R A T Sbjct: 183 GMICDGSLADVTVLALIGERGREVREFLEHTLTPEARARAIVVVATSDRPALERLKAAYT 242 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAE+F +G +VLL++DS+TRFA + REI +GE P A YP S F+ LP LLER Sbjct: 243 ATAIAEHFRDQGRDVLLMMDSLTRFARAAREIGLAAGEKPAAGSYPPSFFARLPGLLERA 302 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 GP+ G+IT + +VLV+GDN N+P+AD VRSILDGHIVL+R LAE YP +D ASV Sbjct: 303 GPAAT--GSITGLYTVLVEGDNLNEPVADEVRSILDGHIVLSRKLAEANHYPAIDVGASV 360 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR+ + + + + L L + + + +G YR G D D A+ + I FL Sbjct: 361 SRVMSQIVATRHRDGAARLRRLDAVYRDIELLVRVGEYRHGADPEADDALARREAIRQFL 420 Query: 418 KQSPSDLSSED 428 QS +D +S D Sbjct: 421 CQSVTDKTSFD 431 >gi|62199646|gb|AAX76920.1| EsaN [Edwardsiella tarda] Length = 438 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 146/342 (42%), Positives = 208/342 (60%), Gaps = 9/342 (2%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118 +V+ I D + P ++ G LV G + RI GRVI+ALG+P+DG Sbjct: 59 AEVVAIEGDQALLSPYHAPLGLANGMLVTPSGAQARIGVGEALLGRVIDALGQPMDGSAP 118 Query: 119 LGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 S+E S P M R ++ G+R ID + GQR+G+F+ +G GKSTL Sbjct: 119 PQAAQWRSLE--SPAPDPMQRAPIDTLLPMGVRAIDAALSVGVGQRLGIFSPAGCGKSTL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M A D V+++L+GERGREVREFIE + L+ +SVV++ATSD + R A Sbjct: 177 LGMLAAHSQVDVVVLALIGERGREVREFIEQIISPELRARSVVILATSDRPALERIKAAD 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA IAEYF +G +VLL++DS+TR+A +IREIA +GE V+ GYP S+++ LPRLLER Sbjct: 237 TATVIAEYFRDRGHHVLLLVDSLTRYARAIREIALAAGEPMVSGGYPPSLYARLPRLLER 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 GP+ G+ITA +VLV + +DP+A+ VRS+LDGHIVL+R LAE YP +D LAS Sbjct: 297 AGPA--ACGSITAFYTVLV--EQKSDPLAEEVRSLLDGHIVLSRRLAEASHYPAIDILAS 352 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +SR+ + + ++ + L HL+ ++E + +G YR G Sbjct: 353 ISRVMSQVVTPQHRQAANRLRHLLATWQEIALLVRVGEYRAG 394 >gi|85858820|ref|YP_461022.1| flagellum-specific ATP synthase [Syntrophus aciditrophicus SB] gi|85721911|gb|ABC76854.1| flagellum-specific ATP synthase [Syntrophus aciditrophicus SB] Length = 455 Score = 246 bits (627), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 138/324 (42%), Positives = 200/324 (61%), Gaps = 7/324 (2%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFT 156 A GRVI+ +G PID + G D E P + R R+ G++V++ Sbjct: 109 AGLLGRVIDGVGNPID---NRGPIDTEEEYPLYAEPINPLARGRISDPIDFGVKVLNGLF 165 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215 GQR+G+FAGSG+GKS L+ M AR+ D +I L+GERGREVREF+E LG + L Sbjct: 166 SCGKGQRMGIFAGSGVGKSVLMGMIARNTSADINVIGLIGERGREVREFLEKNLGKEGLA 225 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 +SVVVVA SD P++R A A T++EYF +G +VLL++DS+TRFA + REI + GE Sbjct: 226 RSVVVVAASDMHPLIRMRAAHVATTVSEYFRDQGRDVLLMVDSLTRFAMAQREIGLSVGE 285 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +GY SVFS LP+LLER G E +G+IT + ++LV+GD+ N+PI+D+ RSILDGH Sbjct: 286 PPTTKGYTPSVFSLLPKLLERAGKVEG-RGSITGLYTILVEGDDFNEPISDAARSILDGH 344 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 + L+R LA + YP VD L S+SR+ S + + + + +I ++ ++ IG Y Sbjct: 345 LYLSRELAAKNHYPAVDVLNSISRVMIDIVSEKHRNMANRILSIIAAHKKAEELINIGAY 404 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 G + +D A+ + + DFL+Q Sbjct: 405 VHGSNAEIDYAIRMIDKVNDFLRQ 428 >gi|124516308|gb|EAY57816.1| flagellar protein export ATPase FliI [Leptospirillum rubarum] Length = 462 Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 150/398 (37%), Positives = 229/398 (57%), Gaps = 31/398 (7%) Query: 51 HQGKNSDNLGQVIR---INLDIVYICPVGIGEEISLGDLVFHWGRFRISP---------- 97 +G + +G +I I L I IC +G ++ + F GR + P Sbjct: 34 REGAVVEGIGLMIEARGIELGIGEICSIGSDPPVAAEVVGFREGRSLLMPLGELRGIRPG 93 Query: 98 --SAC------------WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 AC + GRV++ +G +DG +G + + + + + R+RV+ Sbjct: 94 LSVACREKRPQAWVSEQFLGRVLDPMGHALDGGAD-PEGAVPVPLYGEPVNPLVRRRVDS 152 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 T +R ++ L GQ++G+FAG+G+GKSTLL M AR D +++L+GERGREVR Sbjct: 153 VLDTRVRALNALLTLGQGQKVGLFAGAGVGKSTLLGMMAREADVDVSVVALIGERGREVR 212 Query: 204 EFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 EF+E LG+ L +SVVVV+T D+ +LR L A+++AEYF + +VL ++DS+TRF Sbjct: 213 EFLERDLGEEGLSRSVVVVSTGDQPSLLRVRGALFAMSVAEYFRKQNRSVLFVMDSLTRF 272 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHN 321 A ++REI +GE P ARGY SVF++LPR +ER G E E G+IT + +VLV+G D + Sbjct: 273 AMALREIGLATGEPPTARGYTPSVFAQLPRFVERAGGIEGE-GSITGLYTVLVEGADMTS 331 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIH 381 DP++D++ +ILDGHI+L+R LA EG YP VD L S SR+ + L ++ Sbjct: 332 DPLSDALAAILDGHILLSRDLAAEGIYPSVDLLHSRSRVMPVIADPHHRALAATFLRYES 391 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + ++ D+ +G Y PG+D LD+AV P + +FL Q Sbjct: 392 LYRKSEDLIRVGAYVPGMDPELDQAVSLHPRMMEFLSQ 429 >gi|19749325|gb|AAL98695.1| Y4yI [Sinorhizobium fredii] Length = 346 Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 135/324 (41%), Positives = 196/324 (60%), Gaps = 4/324 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI++ +P+DG + ++ + +VP M R+ VE+ F G+R +D GQ Sbjct: 12 GRVIDSRCRPLDGKCEVKTTEVR-PLHGRVPNPMTRRMVERPFPLGVRALDGLLTCGEGQ 70 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221 RIG++ G GKSTL+S + D I +L+ +RGREVREF+E +LG+ L++++VVV Sbjct: 71 RIGIYGEPGGGKSTLISQIVKGAAADVFIFALICQRGREVREFVERHLGEEGLRRAIVVV 130 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 TSD S R A +AEYF +G V L+LDS+TRF ++REI +GE P RG Sbjct: 131 ETSDRSATERAQCAPMATALAEYFREQGLRVALLLDSLTRFCRAMREIGLAAGEPPTRRG 190 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 +P SVF+ LP LLER G E+ G+ITA +VLV+GD DPIA+ R I+DGHIVL+R+ Sbjct: 191 FPPSVFAALPGLLERAGMGER--GSITAFYTVLVEGDGTGDPIAEESRGIVDGHIVLSRA 248 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA +P +D L S SR+ D S +K S L+ R+ E + +G Y+ G D Sbjct: 249 LAARSHFPAIDVLQSRSRVMDAVVSETHRKAASFFRDLLARYAECEFLINVGEYKQGGDP 308 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLS 425 + D+AV + + +FL+QS ++S Sbjct: 309 LTDRAVASIGELKEFLRQSEDEVS 332 >gi|120613028|ref|YP_972706.1| flagellar protein export ATPase FliI [Acidovorax citrulli AAC00-1] gi|120591492|gb|ABM34932.1| flagellar protein export ATPase FliI [Acidovorax citrulli AAC00-1] Length = 474 Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 150/383 (39%), Positives = 219/383 (57%), Gaps = 23/383 (6%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC------------------ 100 L +V+ + D ++ P G +S G V + P C Sbjct: 72 LAEVVGFSGDRAFLMPAGDIHGLSSGASVVPAAPYVPVPRLCDSTRPSTAAGILRLPVGD 131 Query: 101 -WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPL 158 GRV+++ G P+D + D+S E M + AM+R V + TG+R I+ + Sbjct: 132 GLLGRVVDSQGLPLDHGGPVQ--DVSSEPMDRRQINAMDRDPVRQMLDTGVRAINALLTV 189 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKS 217 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EF+ED LG+ + +++ Sbjct: 190 GRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGEQDRERA 249 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VVV A +D P+LR A IAE+F KG +VLL++DS+TR+A + REIA GE P Sbjct: 250 VVVAAPADAPPLLRMQGAAYATAIAEHFRDKGKHVLLLMDSLTRYAMAQREIALAIGEPP 309 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP S F++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIV Sbjct: 310 ATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADSARAILDGHIV 369 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R+LAE G +P +D S SR+ S + L + R++++RD+ +G Y Sbjct: 370 LSRALAETGHFPAIDIEQSASRVMHNVASREHFDLARRFRAVYSRYQKSRDLIQVGAYMS 429 Query: 398 GVDLILDKAVHQVPIIYDFLKQS 420 G D LD+A+ P + FL+Q+ Sbjct: 430 GSDPALDEAIRLQPAMAAFLQQN 452 >gi|121596091|ref|YP_987987.1| flagellar protein export ATPase FliI [Acidovorax sp. JS42] gi|120608171|gb|ABM43911.1| flagellar protein export ATPase FliI [Acidovorax sp. JS42] Length = 455 Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 150/385 (38%), Positives = 216/385 (56%), Gaps = 25/385 (6%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLV---------FHWGRFRISPSAC--------- 100 L +V+ D Y+ P G +S G V H G + + Sbjct: 52 LAEVVGFAGDTAYLMPAGDIHGLSSGASVMPAPAYVPALHLGAAPVEEAGAGVGALLLPM 111 Query: 101 ---WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFT 156 GRV+++ G P+D L + ++ + M + P AM R V + TG+R I+ Sbjct: 112 GDGLLGRVVDSQGNPLDHAGPLAQ--VTAQPMDRRPINAMERDPVREPLDTGVRAINALL 169 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLK 215 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EF+ED LG + Sbjct: 170 TVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGVQDRG 229 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++VVV A +D P+LR A IAE+F KG +VLL++DS+TR+A + REIA GE Sbjct: 230 RAVVVAAPADAPPLLRMQGAAYATAIAEHFRDKGQHVLLLMDSLTRYAMAQREIALAIGE 289 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +GYP S F++LP L+ER G G+ITA +VL +GD+ DPIAD+ R+ILDGH Sbjct: 290 PPATKGYPPSCFAKLPALVERSGNGLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGH 349 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL+R+LAE G YP +D S SR+ +L + R++++RD+ +G Y Sbjct: 350 IVLSRALAESGHYPAIDIEQSASRVMHNVVPRAHFELARGFRAVYSRYQKSRDLIQVGAY 409 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQS 420 G D LD+A+ P + FL+QS Sbjct: 410 MSGSDPQLDEAIRLQPGMTAFLQQS 434 >gi|206603151|gb|EDZ39631.1| Flagellum-specific ATP synthase FliI [Leptospirillum sp. Group II '5-way CG'] Length = 462 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 136/324 (41%), Positives = 204/324 (62%), Gaps = 4/324 (1%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S + GRV++ +G +DG +G + + + + + R+RV+ T +R ++ Sbjct: 108 SEQFLGRVLDPMGHALDGGAD-PEGAVPVPLYGEPVNPLVRRRVDSVLDTRVRALNALLT 166 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKK 216 + GQ++G+FAG+G+GKSTLL M AR D +++L+GERGREVREF+E LG+ L + Sbjct: 167 MGQGQKVGLFAGAGVGKSTLLGMMAREADVDVSVVALIGERGREVREFLERDLGEEGLSR 226 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 SVVVV+T D+ +LR L A+++AEYF + NVL ++DS+TRFA ++REI +GE Sbjct: 227 SVVVVSTGDQPSLLRVRGALFAMSVAEYFRKQNRNVLFVMDSLTRFAMALREIGLATGEP 286 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHNDPIADSVRSILDGH 335 P ARGY SVF++LPR +ER G E E G+IT + +VLV+G D +DP++D++ +ILDGH Sbjct: 287 PTARGYTPSVFAQLPRFVERAGGLEGE-GSITGLYTVLVEGADMTSDPLSDALAAILDGH 345 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 I+L+R LA EG YP VD S SR+ A + L + + ++ D+ +G Y Sbjct: 346 ILLSRDLAAEGIYPSVDLPHSRSRVMPVIADAHHRALAGTFLRYESLYRKSEDLIRVGAY 405 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQ 419 PG D LD+AV P + +FL Q Sbjct: 406 VPGTDPELDQAVSLHPRMMEFLSQ 429 >gi|293395600|ref|ZP_06639883.1| flagellum-specific ATP synthase FliI [Serratia odorifera DSM 4582] gi|291421919|gb|EFE95165.1| flagellum-specific ATP synthase FliI [Serratia odorifera DSM 4582] Length = 453 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 137/330 (41%), Positives = 198/330 (60%), Gaps = 2/330 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ KP+DG + G + + P + R + + G+R I+ + Sbjct: 114 ALLGRVLDGSAKPLDGLPAPDTGYRAPLFTAPFNP-LQRTPIAQVLDVGVRTINGLLTVG 172 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 173 RGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGAAGRARSV 232 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 233 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 292 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH+VL Sbjct: 293 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHVVL 352 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LAE G YP +D AS+SR + + V + ++ ++ RD+ +G Y G Sbjct: 353 SRRLAEAGHYPAIDIEASISRAMTALIDDEHYRRVRNFKQMLASYQRNRDLISVGAYAAG 412 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 D +LDKA+ P + +L+Q + S D Sbjct: 413 SDPLLDKAMTLYPQMEAYLQQGIFERSGYD 442 >gi|269138233|ref|YP_003294933.1| type III secretion system ATPase [Edwardsiella tarda EIB202] gi|61743018|gb|AAX55238.1| EsaN [Edwardsiella tarda] gi|267983893|gb|ACY83722.1| type III secretion system ATPase [Edwardsiella tarda EIB202] gi|304558276|gb|ADM40940.1| EsaN [Edwardsiella tarda FL6-60] Length = 438 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 146/342 (42%), Positives = 208/342 (60%), Gaps = 9/342 (2%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118 +V+ I D + P ++ G LV G + RI GRVI+ALG+P+DG Sbjct: 59 AEVVAIEGDQALLSPYHAPLGLANGMLVTPSGAQARIGVGEALLGRVIDALGQPMDGCAP 118 Query: 119 LGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 S+E S P M R ++ G+R ID + GQR+G+F+ +G GKSTL Sbjct: 119 PQAAQWRSLE--SPAPDPMQRAPIDTLLPMGVRAIDAALSVGVGQRLGIFSPAGCGKSTL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M A D V+++L+GERGREVREFIE + L+ +SVV++ATSD + R A Sbjct: 177 LGMLAAHSQVDVVVLALIGERGREVREFIEQIMSPELRARSVVILATSDRPALERIKAAD 236 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA IAEYF +G +VLL++DS+TR+A +IREIA +GE V+ GYP S+++ LPRLLER Sbjct: 237 TATVIAEYFRDRGHHVLLLVDSLTRYARAIREIALAAGEPMVSGGYPPSLYARLPRLLER 296 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 GP+ G+ITA +VLV + +DP+A+ VRS+LDGHIVL+R LAE YP +D LAS Sbjct: 297 AGPA--ACGSITAFYTVLV--EQKSDPLAEEVRSLLDGHIVLSRRLAEASHYPAIDILAS 352 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +SR+ + + ++ + L HL+ ++E + +G YR G Sbjct: 353 ISRVMSQVVTPQHRQAANRLRHLLATWQEIALLVRVGEYRAG 394 >gi|304311665|ref|YP_003811263.1| Type III secretion system ATPase [gamma proteobacterium HdN1] gi|301797398|emb|CBL45618.1| Type III secretion system ATPase [gamma proteobacterium HdN1] Length = 434 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 150/365 (41%), Positives = 209/365 (57%), Gaps = 8/365 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDD 117 L + + I I + P+G E +S LV G + GRV+++ G P+DG Sbjct: 54 LAEAVGIKHHITLLNPLGTMEGVSNTMLVEVIEGASTVPVGRELLGRVLDSQGLPLDGKP 113 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 I + P M R V+K F TG++ ID L GQR G+FA +G GKSTL Sbjct: 114 P-PNCAHRAAIYAAAPDPMKRLPVDKAFSTGVQAIDSMLTLGLGQRAGIFAMAGGGKSTL 172 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPL 236 L M AR D ++ L+GERGREVREFI++ LG + L KSVV+V+TSD + R L Sbjct: 173 LGMLARGSESDVNVVVLIGERGREVREFIDESLGAEGLAKSVVLVSTSDRPALERCRVAL 232 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 IAEYF KG VLL++DS+TR+A ++R+I GE PV RG+ SVFS+LPRL ER Sbjct: 233 VGTAIAEYFRDKGLRVLLMMDSVTRYARALRDIGLALGEPPVRRGFTPSVFSQLPRLFER 292 Query: 297 IGPSEKEKGNITAVISVLVDGDNHN--DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 G EKG IT + +VL + D H+ DP+ + VRS+LDGHIVL+R LA YP +D L Sbjct: 293 AG--NNEKGYITGIYTVLAE-DEHDGEDPVTEEVRSLLDGHIVLSRKLAAAAHYPAIDVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 AS SR+ + + ++ + + L+ +++E + +G Y+ G D D A+ P+I Sbjct: 350 ASASRVMHNVTTPEHRQKAARVRALMSKYKEVELLLQVGEYKKGTDGQADDAIRAAPMIG 409 Query: 415 DFLKQ 419 LKQ Sbjct: 410 GLLKQ 414 >gi|319764512|ref|YP_004128449.1| flagellar protein export atpase flii [Alicycliphilus denitrificans BC] gi|330826728|ref|YP_004390031.1| flagellar protein export ATPase FliI [Alicycliphilus denitrificans K601] gi|317119073|gb|ADV01562.1| flagellar protein export ATPase FliI [Alicycliphilus denitrificans BC] gi|329312100|gb|AEB86515.1| flagellar protein export ATPase FliI [Alicycliphilus denitrificans K601] Length = 467 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 141/340 (41%), Positives = 207/340 (60%), Gaps = 4/340 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGI 149 G R+ GRV+++ G+P+D L + ++ M + P AM R V + TG+ Sbjct: 117 GVLRLPMGDGLLGRVVDSQGQPLDHGGPLER--VTALPMDRSPINAMERDPVREPLDTGV 174 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 R I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EF+ED Sbjct: 175 RAINALLTVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDI 234 Query: 210 LGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG+ + ++VVV A +D P+LR A IAE+F +G +VLL++DS+TR+A + RE Sbjct: 235 LGETDRGRAVVVAAPADAPPLLRMQGAAYATAIAEHFRDQGRHVLLLMDSLTRYAMAQRE 294 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 IA GE P +GYP S F++LP L+ER G G+ITA +VL +GD+ DPIAD+ Sbjct: 295 IALAIGEPPATKGYPPSCFAKLPALVERSGNGLNGVGSITAFYTVLSEGDDQQDPIADAA 354 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R+ILDGHIVL+R+LAE G YP +D S SR+ S + + R++++RD Sbjct: 355 RAILDGHIVLSRALAESGHYPAIDIEQSASRVMHNVVSRSHFDMARGFRAIYSRYQKSRD 414 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + +G Y G D +LD+A+ P + FL+Q + +S D Sbjct: 415 LIQVGAYMSGSDPLLDEAIRLQPGMTAFLQQDMFEAASMD 454 >gi|168334547|ref|ZP_02692703.1| Flagellar biosynthesis/type III secretory pathway ATPase [Epulopiscium sp. 'N.t. morphotype B'] Length = 432 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 145/363 (39%), Positives = 213/363 (58%), Gaps = 6/363 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117 L +V+ + + P+G I G V G + I G+V++ P+DG Sbjct: 54 LAEVVGFREKNILLMPLGNNSGIGPGCPVISNGQKITIKVDESLLGKVVDWRANPLDGTP 113 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + K S+ I P + R+R+ GI+ ID + GQR+G+FAGSG+GKSTL Sbjct: 114 NRCK--FSVPIEQDAPDPLKRKRIASQMVLGIKAIDGMLSIGSGQRMGIFAGSGVGKSTL 171 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPL 236 + M AR+ D +I+L+GERGREVREF+E L + L +S+VVVATSD+ ++R A Sbjct: 172 MGMIARNAISDINVIALIGERGREVREFLEKDLKEAGLARSIVVVATSDQPALIRLKAAK 231 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA IAEYF +G VL ++DS+TRF+ + REI + GE PV+RGY SVF +P+LLER Sbjct: 232 TATAIAEYFRDQGKQVLFLMDSLTRFSMAQREIGLSIGEPPVSRGYTPSVFGVMPKLLER 291 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G E G IT + +VLVDGD+ N P+ D+ R ILDGHI+L+R +A YP +D LAS Sbjct: 292 TG--NNEIGGITGLYTVLVDGDDFNXPVTDTARGILDGHIMLSRKIAHRAHYPAIDVLAS 349 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 +SR+ SA+ ++L + + + + + D+ +G Y G + +D A+ ++ I F Sbjct: 350 ISRVMGDVISAEHRELATIIKRHMAVYADVEDLINVGAYNRGSNPEIDAAIDKMGAINAF 409 Query: 417 LKQ 419 L Q Sbjct: 410 LTQ 412 >gi|312958824|ref|ZP_07773343.1| type III secretion system rscN [Pseudomonas fluorescens WH6] gi|311286594|gb|EFQ65156.1| type III secretion system rscN [Pseudomonas fluorescens WH6] Length = 452 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 162/409 (39%), Positives = 238/409 (58%), Gaps = 15/409 (3%) Query: 20 VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIG 78 V G I ++ + + C +GD V + D L ++I + + +G Sbjct: 26 VTARGRIQRVSGML--LQCRLPQARIGDLCRVEKNPGDDMLAEIIGFDQQDAVLSALGNL 83 Query: 79 EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL----SMEIMSKVP 133 E + +G V G R+ S G+V++ G+PI GD D + ++ + P Sbjct: 84 EGVRVGASVERLGVPHRVQVSDELLGQVLDGFGRPIAGDGPSAFADAQASDATPVLCEAP 143 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 R R+ + TG+R ID L GQR+G+FAG+G GK+TLL+ AR+ D ++ Sbjct: 144 LPTERPRINRALATGVRSIDGLITLGEGQRVGLFAGAGCGKTTLLAEIARNVECDVIVFG 203 Query: 194 LVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNV 252 L+GERGRE+REF++ L D L+ K+V+V ATSD S + R A TA +AE F KG V Sbjct: 204 LIGERGRELREFLDHELDDQLRAKAVLVCATSDRSSMERARAAFTATALAEGFRRKGQRV 263 Query: 253 LLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVI 311 LL++DS+TRFA + REI +GE P+ RG P SV+S LPRL+ER G + + G ITA+ Sbjct: 264 LLLIDSLTRFARAQREIGLAAGE-PLGRGGLPPSVYSLLPRLVERAGLTRE--GVITAIY 320 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEK 370 +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP VD LAS+SR L++ A SAD + Sbjct: 321 TVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAVDVLASLSRILSNVARSADIQ 380 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 ++L L+ +++ + +G Y+PG D + D AV + FL+Q Sbjct: 381 A-GTALRRLLSAYQQIELMLKLGEYQPGSDALTDLAVDSRQAVDGFLRQ 428 >gi|326319068|ref|YP_004236740.1| flagellar protein export ATPase FliI [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375904|gb|ADX48173.1| flagellar protein export ATPase FliI [Acidovorax avenae subsp. avenae ATCC 19860] Length = 474 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 142/331 (42%), Positives = 204/331 (61%), Gaps = 4/331 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGI 149 G R+ GRV+++ G P+D + D+S E M + AM+R V + TG+ Sbjct: 123 GILRLPMGDGLLGRVVDSQGLPLDHGGPVQ--DVSSEPMDRRQINAMDRDPVREMLDTGV 180 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 R I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EF+ED Sbjct: 181 RAINALLSVGRGQRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDI 240 Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 LG+ + +++VVV A +D P+LR A IAE+F KG +VLL++DS+TR+A + RE Sbjct: 241 LGEQDRERAVVVAAPADAPPLLRMQGAAYATAIAEHFRDKGKHVLLLMDSLTRYAMAQRE 300 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 IA GE P +GYP S F++LP L+ER G G+ITA +VL +GD+ DPIADS Sbjct: 301 IALAIGEPPATKGYPPSCFAKLPALVERSGNGLHGVGSITAFYTVLSEGDDQQDPIADSA 360 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 R+ILDGHIVL+R+LAE G +P +D S SR+ S + L + R++++RD Sbjct: 361 RAILDGHIVLSRALAETGHFPAIDIEQSASRVMHNVASREHFDLARRFRAVYSRYQKSRD 420 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +G Y G D LD+A+ P + FL+Q Sbjct: 421 LIQVGAYMSGSDPALDEAIRLQPAMAAFLQQ 451 >gi|222112247|ref|YP_002554511.1| ATPase flii/yscn [Acidovorax ebreus TPSY] gi|221731691|gb|ACM34511.1| ATPase FliI/YscN [Acidovorax ebreus TPSY] Length = 467 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 139/320 (43%), Positives = 199/320 (62%), Gaps = 4/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV+++ G P+D L + ++ + M + P AM R V + TG+R I+ + G Sbjct: 129 GRVVDSQGNPLDHAGPLTQ--VTAQPMDRSPINAMERDPVREPLDTGVRAINALLTVGRG 186 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV+EF+ED LG + ++VVV Sbjct: 187 QRLGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKEFVEDILGVQDRGRAVVV 246 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D P+LR A IAE+F KG +VLL++DS+TR+A + REIA GE P + Sbjct: 247 AAPADAPPLLRMQGAAYATAIAEHFRDKGQHVLLLMDSLTRYAMAQREIALAIGEPPATK 306 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP S F++LP L+ER G G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 307 GYPPSCFAKLPALVERSGNGLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSR 366 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +LAE G YP +D S SR+ +L + R++++RD+ +G Y G D Sbjct: 367 ALAESGHYPAIDIEQSASRVMHNVVPRAHFELARGFRAVYSRYQKSRDLIQVGAYMSGSD 426 Query: 401 LILDKAVHQVPIIYDFLKQS 420 LD+A+ P + FL+QS Sbjct: 427 PQLDEAIRLQPGMTAFLQQS 446 >gi|167841193|ref|ZP_02467877.1| hypothetical protein Bpse38_31253 [Burkholderia thailandensis MSMB43] Length = 449 Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 155/392 (39%), Positives = 225/392 (57%), Gaps = 11/392 (2%) Query: 51 HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINAL 109 H G + LG+V+ + + + +G + LV R+ GRV++ L Sbjct: 54 HFGSDERVLGEVVGLTRETALVTLLGDVAGLGTSTLVRPCVDSHRVCVGTGLLGRVLDGL 113 Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 G+P+DG +L G + + PP + R + +TGIR ID F + GQRIG+FA Sbjct: 114 GRPLDGGPAL-DGMAARPSAAAPPPPLTRPLIRAILQTGIRAIDGFLTMGRGQRIGIFAP 172 Query: 170 SGIGKSTLLSMFARSDCFDKV-IISLVGERGREVREFIEDYLGDNLKKS-VVVVATSDES 227 +G GKSTLL M AR+ V +++L+GERGREVREF+++ L ++S VVV ATSD Sbjct: 173 AGAGKSTLLGMMARNMASGTVCVVALIGERGREVREFLDEILSVTQRQSTVVVAATSDRP 232 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 + R A TA TIAEYF +G +VLL+ DS+TRFA ++RE +GE V RGYP SVF Sbjct: 233 SMERIKAAYTATTIAEYFRDEGYDVLLLCDSVTRFARAMRETGLAAGEPAVRRGYPPSVF 292 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + LP L+ER GP+ + GNITA+ +VL++ DPI + +RS+LDGHIVL+ LA G Sbjct: 293 AALPGLVERAGPA--KNGNITALYTVLLEDAEITDPIGEEIRSLLDGHIVLSPKLASAGH 350 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YP +D +S+SR+ + + + I R+++ + IG YR G D +LD A+ Sbjct: 351 YPAIDIRSSISRVMPQLVDFTTARAAARCREWIARYDDAELLLQIGEYRDGGDPVLDSAI 410 Query: 408 HQVPIIYDFLKQSPSDLSSEDV-FQEITKKLQ 438 + DFLKQ + E V +E T +L+ Sbjct: 411 AAHGDLADFLKQG----TRESVPIEETTMRLR 438 >gi|218507231|ref|ZP_03505109.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5] Length = 362 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 117/165 (70%), Positives = 133/165 (80%) Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P+ARGYP SVF+ELPRLLER GP + G ITA+IS+LVDGDNHNDPIADS R ILD Sbjct: 1 GEPPIARGYPASVFTELPRLLERAGPGPEGAGTITAIISILVDGDNHNDPIADSTRGILD 60 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL RSLAEEGRYPP+DPLAS+SRLA KAW+ D++KLVS L LIHRFEETRD+RLIG Sbjct: 61 GHIVLQRSLAEEGRYPPIDPLASISRLARKAWTPDQEKLVSRLKVLIHRFEETRDLRLIG 120 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 GYR G D LD AV QVPIIYD LKQ+P D S D F ++ + + Sbjct: 121 GYRQGADPDLDMAVKQVPIIYDVLKQAPGDRESVDAFADLAGRAE 165 >gi|307947529|ref|ZP_07662862.1| type III secretion ATP synthase HrcN [Roseibium sp. TrichSKD4] gi|307769347|gb|EFO28575.1| type III secretion ATP synthase HrcN [Roseibium sp. TrichSKD4] Length = 444 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 147/422 (34%), Positives = 240/422 (56%), Gaps = 18/422 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDF--VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEI 81 G ++ I+ V T + V +GD ++ + +V+ IN + P+G E + Sbjct: 26 GKLTDISPVRLTADI--EGVAIGDICEMIDRETGYTGFARVVSINTGTAILAPLGAIEGL 83 Query: 82 SLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA----M 136 S G V G F + G +++ LG+P++ S D + ++ P + Sbjct: 84 SAGAEVIPTGEDFTFTCGDGLLGSMLDGLGRPLETGFSTSGSDW---VKRRISPTQINPL 140 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R ++ F++G++ ID L GQRIG+F G GKSTL+ AR+ D +++++G Sbjct: 141 SRPPIDTVFESGVKAIDGLNTLGEGQRIGLFGDPGSGKSTLMGSLARNCNADVCVLAMIG 200 Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREF+E L + +SVV+ +TSD + R + A +IAEYF +G +VLL+ Sbjct: 201 ERGREVREFMERQLPPAFRSRSVVIASTSDSPAMQRILGGYIATSIAEYFRDQGKSVLLL 260 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 DS+TRFA ++RE+ +GE V RG+ SV++ELPRL+ER G + ++G+ITA+ +VL Sbjct: 261 FDSVTRFARALREVGLAAGEAAVRRGFTPSVYAELPRLIERCG--KTDRGSITAIYTVLT 318 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + + +DPIA+ VRSI DGHI+L+ LA GRYP +D L S SRL ++ + + + S Sbjct: 319 ENEGLDDPIAEEVRSITDGHIILSSELAHSGRYPAIDVLQSRSRLMNEIVTPEHIQASSK 378 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 + L+ +F E + +G Y+ G D + D+A+ + I FL Q+ D ++ + EI + Sbjct: 379 VRMLMSKFLEIELLLQVGEYKEGADPVADEAIAKREQIAQFLTQNSHDGAA---YPEILE 435 Query: 436 KL 437 +L Sbjct: 436 QL 437 >gi|225849151|ref|YP_002729315.1| flagellum-specific ATP synthase [Sulfurihydrogenibium azorense Az-Fu1] gi|225643237|gb|ACN98287.1| flagellum-specific ATP synthase [Sulfurihydrogenibium azorense Az-Fu1] Length = 437 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 135/322 (41%), Positives = 208/322 (64%), Gaps = 5/322 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G +++ GKP++ ++ +++ S P + R+R+++ G++VI+ + Sbjct: 90 LLGSILDPFGKPLNRENINYSNSYYLKLESINP--LERERIKEVLDVGVKVINALITIGK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQR+G+ A +G+GKSTLL M AR D +I+L+GERGREV+EFIED LG+ LKKSVV Sbjct: 148 GQRVGILAPAGVGKSTLLGMIARYTDADVNVIALIGERGREVKEFIEDNLGEEGLKKSVV 207 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD SP+ + A LT++TIA+YFS KG NVL +LDS+TR A + REI ++GE P Sbjct: 208 VVATSDMSPLAKIRAVLTSLTIAKYFSDKGKNVLYLLDSLTRVAMAQREIGLSAGEPPTT 267 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIVL 338 +GY SVF+ +P+++E+ G + K KG+IT + +VL++G+ DP+AD+ S LDGHI L Sbjct: 268 KGYTPSVFTLMPKIIEQAG-NFKGKGSITGIYTVLIEGEEISTDPVADAAVSFLDGHIFL 326 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R +A + YP VD L S+SRL + + + + +L ++ + D+ +G Y+ G Sbjct: 327 SRQIANKRIYPAVDILKSISRLMPQLVNDEIMNYQRIIINLESKYRDMEDMINLGLYKEG 386 Query: 399 VDLILDKAVHQVPIIYDFLKQS 420 +D A+ PII DF++QS Sbjct: 387 SSKEIDIAIKMHPIIEDFIRQS 408 >gi|148554211|ref|YP_001261793.1| FliI/YscN family ATPase [Sphingomonas wittichii RW1] gi|148499401|gb|ABQ67655.1| ATPase, FliI/YscN family [Sphingomonas wittichii RW1] Length = 432 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 136/326 (41%), Positives = 197/326 (60%), Gaps = 4/326 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ALG PIDG + + + + ++R RV + F G+R I+ Sbjct: 92 TLLGRVMDALGNPIDGLGPIATAE-RWPLAGRRGNPLDRARVTEPFDMGVRAINALLTAG 150 Query: 160 HGQRIGVFAGSGIGKSTLLS-MFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKS 217 GQRI + AGSG+GKS L+ M A +D D +++ LVGER REV +F+ L G +KS Sbjct: 151 VGQRIAIAAGSGVGKSVLMGQMIAGADA-DIIVVGLVGERSREVSDFLATKLAGPVRQKS 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 VVV +D P+LR A + A IAEYF ++G VLL++DS+TR AH+ REI + GE P Sbjct: 210 VVVAVPADHPPVLRLRAAMRATAIAEYFRAQGKRVLLLIDSLTRVAHAQREIGLSLGEPP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP S +PRL+ER G G+ITA+ +VL DGD+ +DPI D+ R+I+DGHI+ Sbjct: 270 TMKGYPPSALGLIPRLIERAGVDAHSGGSITALYTVLADGDDTDDPIVDTARAIVDGHII 329 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+RSLAE+G +P +D S+SR+ + + ++ L L +EE RD+ L+G YR Sbjct: 330 LSRSLAEQGVFPAIDVGKSLSRVMSDIVTPEHQQAAQILRRLWAVYEENRDLILMGAYRA 389 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSD 423 G D I+D A+ + I +F+ Q D Sbjct: 390 GSDPIVDVAIARHDHILEFISQGQKD 415 >gi|303326611|ref|ZP_07357053.1| flagellar protein export ATPase FliI [Desulfovibrio sp. 3_1_syn3] gi|302862599|gb|EFL85531.1| flagellar protein export ATPase FliI [Desulfovibrio sp. 3_1_syn3] Length = 498 Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 137/297 (46%), Positives = 188/297 (63%), Gaps = 3/297 (1%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I + P + R R+ G+R I+ L GQR+G+ AGSG+GKSTL+ M AR Sbjct: 166 IYADPPSPLQRPRITDILDVGVRSINSLLTLGKGQRVGIMAGSGVGKSTLMGMMARYTRA 225 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+L+GERGREV EF+E LG + + +SV+V+ATSD+SP++R A A +AEYF Sbjct: 226 DVNVIALIGERGREVVEFMERDLGPEGMARSVLVIATSDQSPLVRMRAAYAATAVAEYFR 285 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 KG +VLL++DS+TRFA + RE+ GE P +GY SVF++LP+LLER G S K G Sbjct: 286 DKGMDVLLMMDSVTRFAMAAREVGLAVGEPPTTKGYTPSVFAQLPKLLERAGRSAK--GT 343 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT + +VLVDGD+ N+PIADSVRSILDGHIVL R LA++G +P +D L S+SRL Sbjct: 344 ITGIYTVLVDGDDFNEPIADSVRSILDGHIVLTRDLADQGHFPAIDVLRSISRLRSDICQ 403 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 ++ +T + F D+ IG Y G + +D+A+ +P I FL Q D Sbjct: 404 REDVLAGRVITRRMSTFRRVEDMVNIGAYARGSNAEIDEAIAAMPDINAFLCQDVGD 460 >gi|256259398|gb|ACU65035.1| HrcN [Pseudomonas syringae pv. syringae] Length = 390 Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 148/391 (37%), Positives = 219/391 (56%), Gaps = 22/391 (5%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117 L +++ D + +G E I G + G +S G V++ G+ +DG Sbjct: 2 LAEIVGFTEDCALLSALGTPEGIEQGARIEPLGVSHSVSVDDSLLGSVLDGFGRRLDGQ- 60 Query: 118 SLGKGDLSME---------IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 G G ++ I +PP R R+ TG+R ID L GQR+G+FA Sbjct: 61 --GDGAFALPGEHRPTQPVICDAIPPT-QRPRIADAMPTGLRAIDAAITLGEGQRVGLFA 117 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDES 227 G+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L D L+ +SV+V ATSD S Sbjct: 118 GAGCGKTTLLAELARNMPCDVIVFGLIGERGRELREFLDHELDDELRARSVLVCATSDRS 177 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSV 286 + R A T IAE + G VLL++DS+TRFA + REI +GE P+ RG P SV Sbjct: 178 SMERARAAFTTTAIAEAYRQSGKRVLLLIDSLTRFARAQREIGIAAGE-PLGRGGLPPSV 236 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 ++ LPRL+ER G SE+ G+ITA+ +VL++ D+ NDP+AD VRS++DGHIV++R LAE G Sbjct: 237 YTLLPRLVERAGRSEQ--GSITAIYTVLIEQDSMNDPVADEVRSLIDGHIVMSRKLAERG 294 Query: 347 RYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKA 406 YP +D AS+SR+ ++ +L L+ +++ + +G Y PG D + D A Sbjct: 295 HYPAIDVQASLSRITSSVTDRQHQRGNVTLRRLLAAYQQVEMLLRLGEYTPGNDTMTDCA 354 Query: 407 VHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 V I FL+Q +L Q+ +L Sbjct: 355 VQLHEQINGFLQQ---ELREPQALQDTLHQL 382 >gi|89069824|ref|ZP_01157159.1| H+-transporting two-sector ATPase, alpha/beta subunit [Oceanicola granulosus HTCC2516] gi|89044625|gb|EAR50741.1| H+-transporting two-sector ATPase, alpha/beta subunit [Oceanicola granulosus HTCC2516] Length = 437 Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 156/416 (37%), Positives = 225/416 (54%), Gaps = 6/416 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G +S + S VT V +GD V + G+VI ++ + G E ISL Sbjct: 23 GRVSGVASAALEVTGFGAGVRVGDPVTLPSLDGRR-GEVIGLDDGTARVLLEGGTEGISL 81 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 V R +P W GRVI+ G+P+DG L G + P R+ + Sbjct: 82 RTPVRLEPPVRFAPGPHWLGRVIDPDGRPLDGRPLL-PGTGRRPRAAPPPRPHRRRPLGA 140 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVR 203 TG V D PL GQR+G+FAGSG+GKSTLL AR D V+I LVGERGRE+R Sbjct: 141 RLSTGFAVFDTLLPLVRGQRLGLFAGSGVGKSTLLGDLARGVEADVVVIGLVGERGRELR 200 Query: 204 EFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 F+++ LG + + +++VV ATSD +P +R+ A+ +A++F G +VLL+LDS+TRF Sbjct: 201 TFVDEVLGAEGMARAIVVTATSDTAPQVRRRCAPAAMAVAQHFRDTGHHVLLLLDSVTRF 260 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A + RE+A GE RG+P S + L ER GP E + G+ITAV SVLV G + + Sbjct: 261 AEAHRELAAAQGEPASLRGFPASTAGAIAALCERAGPGE-DAGDITAVFSVLVAGSDMEE 319 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 P+AD +R +LDGH++L+R +AE R+P +D L SVSR A S E L+S L+ Sbjct: 320 PVADMLRGVLDGHVILDRKVAERNRFPAIDLLRSVSRALPAAASDVENSLISRARALLGS 379 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 ++ + G Y G D +D+A+ + FL Q + +S + F + + L Sbjct: 380 YDRAEMMIQSGLYASGSDARIDEAIACHDALDGFLAQRSASVS--ESFAALRRALN 433 >gi|270262384|ref|ZP_06190655.1| flagellum-specific ATP synthase [Serratia odorifera 4Rx13] gi|270043068|gb|EFA16161.1| flagellum-specific ATP synthase [Serratia odorifera 4Rx13] Length = 324 Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 129/294 (43%), Positives = 185/294 (62%), Gaps = 1/294 (0%) Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 + R +E+ G+R I+ + GQR+G+FAGSG+GKS LL M AR D +++ L+ Sbjct: 20 LQRTPIEQVLDVGVRTINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLI 79 Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREV++FIE+ LG + +SVV+ A +D SP+LR A IAE F +G +VLL Sbjct: 80 GERGREVKDFIENILGTEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLL 139 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 I+DS+TR+A + REIA GE P +GYP SVF++LP L+ER G G+ITA +VL Sbjct: 140 IMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVL 199 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 +GD+ DPIADS R+ILDGH+VL+R LAE G YP +D AS+SR + + V Sbjct: 200 TEGDDQQDPIADSARAILDGHVVLSRRLAEAGHYPAIDIEASISRAMTSLIDEEHYRRVR 259 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + ++ ++ RD+ +G Y G D +LDKA+ P++ +L+Q + S D Sbjct: 260 NFKQMLASYQRNRDLISVGAYVAGSDPLLDKAMTLYPLMEAYLQQGIFERSGYD 313 >gi|224826630|ref|ZP_03699731.1| flagellar protein export ATPase FliI [Lutiella nitroferrum 2002] gi|224601231|gb|EEG07413.1| flagellar protein export ATPase FliI [Lutiella nitroferrum 2002] Length = 464 Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 135/319 (42%), Positives = 200/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+++LG+P+D L + + + S+ + R V G+R I+ + GQ Sbjct: 128 GRVLDSLGRPLDEKGPL-QPEAYFPLYSQPLNPLERSPVRDVLDVGVRAINGLLTVGRGQ 186 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVV 221 R+G+FAGSG+GKS LL M AR D V++ L+GERGREV++FIE+ LG+ + +SV+V Sbjct: 187 RLGLFAGSGVGKSVLLGMMARFTKADIVVVGLIGERGREVKDFIENILGEEGRARSVIVA 246 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D P++R A +AEY+ +G +VLL++DS+TR+A + REIA GE PV +G Sbjct: 247 APADTPPLMRLHGAAYATALAEYYREQGLDVLLLMDSVTRYAMAQREIALAIGEPPVTKG 306 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF+ LP+L+ER G + + G ITA +VL +GD+ DPIAD+ R+ILDGH VL+R Sbjct: 307 YPPSVFARLPQLIERAGNAARGGGAITAFYTVLSEGDDQQDPIADAARAILDGHFVLSRE 366 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LAE G YP +D S+SR+ + + L L R++ RD+ +G Y G D Sbjct: 367 LAEAGHYPAIDIEQSISRVMVDVVAPRQMDLARRFKQLYSRYQRNRDLISVGAYVAGSDP 426 Query: 402 ILDKAV-HQVPIIYDFLKQ 419 +LD+A+ Q+P++ FL Q Sbjct: 427 MLDEAIRRQLPMV-GFLTQ 444 >gi|149201590|ref|ZP_01878564.1| FliI, Flagellum-specific ATPase [Roseovarius sp. TM1035] gi|149144638|gb|EDM32667.1| FliI, Flagellum-specific ATPase [Roseovarius sp. TM1035] Length = 444 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 135/321 (42%), Positives = 188/321 (58%), Gaps = 7/321 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++A G P+DG G D + + + + RQ V+ G+RVI+ + Sbjct: 104 GRVLDAEGAPLDG---YGPPDCPETRPLSGREQNPLARQPVDAPLDVGVRVINAALTVGR 160 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVV 219 GQR+G+ AGSG+GKS L+ M R D +++ L+GER REV +F+ + G+N K+ V Sbjct: 161 GQRVGIIAGSGVGKSVLIEMMTRYTSADVIVVGLIGERAREVGDFVSKVMTGENRAKTCV 220 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V +D SP+LR A A IAEYF +G V+LI+DS+TR AH+ REI GE P A Sbjct: 221 VAVPADRSPLLRLRAAHRATAIAEYFRDQGKQVMLIMDSLTRVAHARREIGLALGEQPTA 280 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIVL 338 +GY SV S +P L+ER GP +G+ITA ++L DGD+ NDP+ D+ R+ILDGH VL Sbjct: 281 KGYTPSVISMIPGLIERAGPGLPGQGSITAFYTILADGDDTTNDPVVDTARAILDGHFVL 340 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R+ A+ G YP +D SVSR+ L LI + E RD+ L+G Y PG Sbjct: 341 SRNQAQMGIYPAIDLTQSVSRVMKDIAEKPHHAAAMRLRRLIALYMENRDMMLMGAYSPG 400 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 D LD+AV P I F++Q Sbjct: 401 QDATLDEAVTLWPRIEAFIRQ 421 >gi|85058028|ref|YP_453730.1| flagellum-specific ATP synthase [Sodalis glossinidius str. 'morsitans'] gi|84778548|dbj|BAE73325.1| flagellum-specific ATP synthase FliI [Sodalis glossinidius str. 'morsitans'] Length = 458 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 131/337 (38%), Positives = 197/337 (58%), Gaps = 9/337 (2%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHG 161 RV+ G+P+D +L + PP + R + G+R I+ + G Sbjct: 118 RVLCGSGQPLD---NLPPPETGYRASLYSPPLNPLARSPITDVLDVGVRAINGLLTVGRG 174 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVV 220 QR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG+ + ++V++ Sbjct: 175 QRMGLFAGSGVGKSMLLGMMARYTQADVIVVGLIGERGREVKDFIENILGEEGIARAVII 234 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REI GE P + Sbjct: 235 AAPADVSPMLRMQGAAYATRIAEDFRDRGKHVLLIMDSLTRYAMAQREIGLAIGEPPATK 294 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIAD+ R+ILDGH+VL+R Sbjct: 295 GYPPSVFAKLPTLVERAGNGADGGGSITAFYTVLTEGDDQQDPIADAARAILDGHVVLSR 354 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 LAE G YP +D S+SR + V + + ++ RD+ +G Y G D Sbjct: 355 QLAESGHYPAIDIETSISRAMTALVDTAHFQQVQQVKQWLASYQRNRDLLSVGAYAAGSD 414 Query: 401 LILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 +LD+A+ P + +L+Q D+S + + ++L Sbjct: 415 PLLDQAIAHYPQLESYLRQ---DVSQPCSYTQSCQQL 448 >gi|85710182|ref|ZP_01041247.1| FliI, Flagellum-specific ATPase [Erythrobacter sp. NAP1] gi|85688892|gb|EAQ28896.1| FliI, Flagellum-specific ATPase [Erythrobacter sp. NAP1] Length = 450 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 131/318 (41%), Positives = 190/318 (59%), Gaps = 2/318 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR ++ LG+PIDG ++ + + ++ K A+ R V + F G+R ++ + GQ Sbjct: 104 GRAVDGLGQPIDGGPAIHASE-TWPLLGKRESALARSGVSESFDCGVRAVNALATMGVGQ 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221 R+G+ AGSG+GKS L+ A + D +I+L+GER REV +F+ ++ G + VVV Sbjct: 163 RMGIIAGSGVGKSVLIDTVAANAKADLAVIALIGERAREVSDFVTRHMSGAERGRMVVVA 222 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +D +P LR A A IAE+F +KG VLL+LDS+TR AH+ RE+A GE ARG Sbjct: 223 VPADHAPNLRLRAAQYASAIAEHFRAKGRKVLLVLDSLTRVAHAARELALVLGEPGAARG 282 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP S S + RL+ER G G +T + SVL DGD+ +DP+ D+ R+ILDGH+VL+R Sbjct: 283 YPPSALSTITRLVERAGNCATSGGAVTGIYSVLADGDDTSDPVVDTARAILDGHLVLSRE 342 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 LA+ G YP +D AS+SR+ SA++ + L LI E RD+ ++G YR G D Sbjct: 343 LAQRGHYPAIDIPASLSRVMHDIASAEQLEAARRLRALIAAREHNRDLVMMGAYRAGSDP 402 Query: 402 ILDKAVHQVPIIYDFLKQ 419 LD A+ I FL+Q Sbjct: 403 DLDCALAHSNAIDAFLQQ 420 >gi|167567833|ref|ZP_02360749.1| type III secretion system ATPase [Burkholderia oklahomensis EO147] Length = 445 Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 147/379 (38%), Positives = 217/379 (57%), Gaps = 7/379 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ D + P I+ G V GR RI+ GRV++ +G+P+D ++ Sbjct: 64 EVVAVDGDAALLSPFAEPRGIAAGSAVRALGRPHRIAVGDFLLGRVVDGVGRPLDDGPAI 123 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 +++ P + R ++ G+R ID GQRIG+FA +G GKSTLL Sbjct: 124 PDDATRIDLDRAAPDPLARAVIDTPLPLGVRAIDGVLTCGRGQRIGIFAAAGGGKSTLLG 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238 M D +++L+GERGREVREF+E L + ++VVVV+TSD + R A TA Sbjct: 184 MICDGSLADVTVLALIGERGREVREFLERTLTPQARARAVVVVSTSDRPALERLKAAYTA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAE+F +G +VLL++DS+TRFA + REI +GE P A YP S F+ LPRLLER G Sbjct: 244 TAIAEHFRDQGGDVLLMMDSLTRFARAAREIGLAAGEKPAAGSYPPSFFARLPRLLERAG 303 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P+ G+IT + +VLV+GD+ N+P+AD VRSILDGHIVL+R LA+ YP +D ASVS Sbjct: 304 PA--ATGSITGLYTVLVEGDDMNEPVADEVRSILDGHIVLSRKLAQANHYPAIDVGASVS 361 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R+ + A L + L L + + + +G Y+PG D D A+ + I FL Sbjct: 362 RVMAQIVDARHLALAARLRRLDAVYRDIELLVRVGEYQPGRDPEADDALARRDAIRRFLC 421 Query: 419 QSPSDLSSEDVFQEITKKL 437 Q ++ ++ F++ +L Sbjct: 422 QP---VTEKNTFEQTIDQL 437 >gi|262276392|ref|ZP_06054201.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP 101886] gi|262220200|gb|EEY71516.1| flagellum-specific ATP synthase FliI [Grimontia hollisae CIP 101886] Length = 438 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 133/328 (40%), Positives = 206/328 (62%), Gaps = 2/328 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ +G P+DG + G + + + P + R+ ++ GI+ I+ + GQ Sbjct: 102 GRVIDGVGNPLDGLGDIFTGQTAPFTPAVINP-LARKPIDAPLDVGIKAINGLLTVGKGQ 160 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVV 221 RIG+FAGSG+GKS L M R V++ L+GERGREV+EFI++ LG + +++VVV Sbjct: 161 RIGLFAGSGVGKSVTLGMMTRGTTAQVVVVGLIGERGREVKEFIDEILGKEGRERAVVVA 220 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 A +D SP++R TA+TIAE+F +G +VLL++DS+TRFA + REIA + GE P +G Sbjct: 221 APADASPLMRLKGCQTALTIAEFFRDQGLDVLLLMDSLTRFAQAQREIALSVGEPPATKG 280 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP SVF++LP L+ER G +G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R Sbjct: 281 YPPSVFAKLPALVERAGNGSDGQGSITAFFTVLTEGDDLQDPIADAARAILDGHIVLSRE 340 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 +A+ G YP +D SVSR+ + + + ++ ++ + +D+ IG Y+PG D Sbjct: 341 MADAGHYPAIDVERSVSRVMPNIVNDEHMLMARAVRQVLSVCRKNQDLVSIGAYKPGTDQ 400 Query: 402 ILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 +D+A P + +L+Q ++ D+ Sbjct: 401 AIDQAFTLKPRLDMYLQQGMKEVVPYDM 428 >gi|325295415|ref|YP_004281929.1| ATPase, FliI/YscN family [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065863|gb|ADY73870.1| ATPase, FliI/YscN family [Desulfurobacterium thermolithotrophum DSM 11699] Length = 441 Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 142/361 (39%), Positives = 217/361 (60%), Gaps = 9/361 (2%) Query: 81 ISLGDLV-FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 ISLG ++ +I S G V++ G P++ + + + ++ P M R+ Sbjct: 67 ISLGSIIESKISGLKIGVSDSLLGLVLDPFGNPMNAESFVPIDFVPLKAEPINP--MKRK 124 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERG 199 R+++ G+R I+ + GQRIG+FAG+G+GKSTL+ M +R D +++L+GERG Sbjct: 125 RIKEPLDLGVRAINALLTVGKGQRIGIFAGAGVGKSTLMGMISRFTEADVNVVALIGERG 184 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 REVREFIED LG+ LKKSV+VVATSD P+ + A TA IAEYFS KG NVLL +DS Sbjct: 185 REVREFIEDNLGEEGLKKSVIVVATSDHPPLAKIRAAFTACAIAEYFSYKGKNVLLFVDS 244 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +TR A + REI GE P ++GY SVFS + +L+ER G + + G+IT + +VLV+GD Sbjct: 245 LTRLAMAQREIGLAVGEPPTSKGYTPSVFSTMAKLIERAG-NFTDGGSITGIYTVLVEGD 303 Query: 319 NHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 + + DP+AD+ LDGHI+L+R LA +P +D + S+SRL + + + K S + Sbjct: 304 DISLDPVADAAVGFLDGHIILSRELANRRVFPSIDIIKSISRLTPQLVNEEVLKYQSIVL 363 Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 + ++ D+ +G Y+ G +D A+ P I +F+KQS + + F + K+L Sbjct: 364 DVESTYQNNSDVINLGLYKKGTSPKIDLAIKVYPAIENFIKQS---FNEKVTFSQSLKEL 420 Query: 438 Q 438 + Sbjct: 421 K 421 >gi|188997541|ref|YP_001931792.1| flagellar protein export ATPase FliI [Sulfurihydrogenibium sp. YO3AOP1] gi|188932608|gb|ACD67238.1| flagellar protein export ATPase FliI [Sulfurihydrogenibium sp. YO3AOP1] Length = 437 Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 134/321 (41%), Positives = 203/321 (63%), Gaps = 5/321 (1%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G +++ G+P++ + +++ + P + R+RV + G+R ++ + Sbjct: 90 LLGTIVDPFGRPLNKEKINYSNSYYLKLETINP--LERERVTEVLDLGVRAVNALFTIGK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQR+G+ +G+G+GKSTLL M +R D +I+L+GERGREVREFIED L + LKKSVV Sbjct: 148 GQRMGILSGAGVGKSTLLGMISRFTESDVNVIALIGERGREVREFIEDSLKEEGLKKSVV 207 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVATSD P+ + A +T++ IA YFS+ G NVL +LDS+TR A + REI ++GE P Sbjct: 208 VVATSDMPPLAKIRAVMTSLAIARYFSNIGKNVLYLLDSLTRVAMAQREIGLSAGEPPTT 267 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIVL 338 +GY SVF+ LPR++E+ G + K KG+IT + +VLV+GD NDPIAD+ S LDGHIVL Sbjct: 268 KGYTPSVFTLLPRIIEQAG-NFKNKGSITGIYTVLVEGDEIQNDPIADAAISFLDGHIVL 326 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R +A + YP +D L S+SRL + + + S + L ++ E D+ +G Y+ G Sbjct: 327 SRQIANKRIYPAIDILKSISRLMPQLVNDEIMLYQSKIISLEAKYREMEDMINLGLYKEG 386 Query: 399 VDLILDKAVHQVPIIYDFLKQ 419 +D A+ P+I +F+KQ Sbjct: 387 SSKEVDLAIKMHPVIEEFIKQ 407 >gi|187734342|ref|YP_001883212.1| type III secretion system ATPase [Shigella boydii CDC 3083-94] gi|187426838|gb|ACD06113.1| type III secretion system ATPase [Shigella boydii CDC 3083-94] Length = 430 Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161 G V+N LG+ D ++ + PP + R +EK F TG++VID G Sbjct: 93 GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219 QR+G+FA +G GK+ L++M D +I L+GERGREV E + DYL ++ KKS V+ Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSSADIYVIGLIGERGREVTETV-DYLKNSEKKSRCVL 211 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATSD S + R A A IAE+F ++G V L +DS+TR+A ++R++A +GE P Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF LPRLLER G K G+ITA +VL++ D+ DP+A+ VRSILDGHI L+ Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA++G++P +D L S+SR+ + + + ++ L+ EE R I G Y+PG Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGE 390 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 + DK +++ ++ FLKQ Sbjct: 391 NASQDKIYNKISVVESFLKQ 410 >gi|167915294|ref|ZP_02502385.1| type III secretion system ATPase [Burkholderia pseudomallei 112] Length = 316 Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 129/302 (42%), Positives = 189/302 (62%), Gaps = 3/302 (0%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 +++ P M+R+ ++ TG+RV+D L GQR+G+FA +G+GKSTLL MFAR Sbjct: 4 LIAAPPEPMSRRMIDAAMPTGVRVVDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAAC 63 Query: 188 DKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+L+GERGREVREFIE LG + +SVVV ATSD S + R A A IAEYF Sbjct: 64 DVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSMERAKAAYAATAIAEYFR 123 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G VLL++DS+TRFA + REI +GE P RG+P SVF+ELPRLLER G G+ Sbjct: 124 DRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMG--RTGS 181 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA+ +VL + ++ +DP+A+ VR ILDGH++L+R +A + +YP +D L S+SR+ Sbjct: 182 ITALYTVLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVD 241 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + + + L+ + E + IG Y+ G + + D+A+ + I F Q D ++ Sbjct: 242 DGHMRAAARVRELLAKHREVEVLLQIGEYKAGANPLADEAIAKADAIRSFFSQRTDDYAA 301 Query: 427 ED 428 + Sbjct: 302 AE 303 >gi|13449096|ref|NP_085312.1| invasion protein [Shigella flexneri 5a] gi|31983538|ref|NP_858282.1| ATP synthase SpaL [Shigella flexneri 2a str. 301] gi|60415903|sp|P0A1C1|SPAL_SHIFL RecName: Full=Probable ATP synthase SpaL/MxiB gi|60415904|sp|P0A1C2|SPAL_SHISO RecName: Full=Probable ATP synthase SpaL/MxiB gi|13310644|gb|AAK18468.1|AF348706_157 invasion protein [Shigella flexneri 5a] gi|152792|gb|AAA26541.1| spa47 [Shigella flexneri] gi|303889|dbj|BAA02825.1| spa47 [Shigella flexneri] gi|829076|dbj|BAA09158.1| ORF18 [Shigella sonnei] gi|12329093|emb|CAC05824.1| Spa47, component of the Mxi-Spa secretion machinery, putative ATPase [Shigella flexneri] gi|18462530|gb|AAL72302.1| Spa47, component of the Mxi-Spa secretion machinery, putative ATPase [Shigella flexneri 2a str. 301] gi|281603904|gb|ADA76887.1| ATP synthase [Shigella flexneri 2002017] gi|333003139|gb|EGK22688.1| putative ATP synthase hrpB6 [Shigella flexneri K-218] gi|333011820|gb|EGK31221.1| putative ATP synthase hrpB6 [Shigella flexneri K-227] gi|333011857|gb|EGK31250.1| putative ATP synthase hrpB6 [Shigella flexneri K-227] gi|333020381|gb|EGK39645.1| putative ATP synthase hrpB6 [Shigella flexneri K-304] Length = 430 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161 G V+N LG+ D ++ + PP + R +EK F TGI+VID G Sbjct: 93 GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGIKVIDSLLTCGEG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219 QR+G+FA +G GK+ L++M D +I L+GERGREV E + DYL ++ KKS V+ Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETV-DYLKNSEKKSRCVL 211 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATSD S + R A A IAE+F ++G V L +DS+TR+A ++R++A +GE P Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF LPRLLER G K G+ITA +VL++ D+ DP+A+ VRSILDGHI L+ Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA++G++P +D L S+SR+ + + + ++ L+ EE R I G Y+PG Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGE 390 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 + DK +++ ++ FLKQ Sbjct: 391 NASQDKIYNKISVVESFLKQ 410 >gi|171319011|ref|ZP_02908138.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5] gi|171095766|gb|EDT40719.1| ATPase, FliI/YscN family [Burkholderia ambifaria MEX-5] Length = 459 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 143/332 (43%), Positives = 191/332 (57%), Gaps = 6/332 (1%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPP-AMNRQRVEKGFKTGI 149 G R+ GRV++ LG+P+D D S D+ M + P + R + TG+ Sbjct: 104 GSHRVGVGGALLGRVLDGLGRPLD-DGSPLPDDVEMRASAAASPRPLTRPLIRSILPTGV 162 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-IISLVGERGREVREFIED 208 R ID GQR+G+FA +G GKSTLL M AR + V +I+L+GERGREVREF++D Sbjct: 163 RAIDGLLTTGRGQRVGIFAPAGTGKSTLLGMIARGVSHECVCVIALIGERGREVREFLDD 222 Query: 209 YLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 L + LK +VVVVATSD + R A TA TIAEYF G VLL+ DS+TRFA ++R Sbjct: 223 ILTPEQLKNTVVVVATSDRPSMERIKAAYTATTIAEYFRDNGREVLLLFDSVTRFARALR 282 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E +GE V RGYP SVFS LP L+ER GP+ G ITA +VL++ +DPI + Sbjct: 283 ETGLAAGEPAVRRGYPPSVFSALPGLVERAGPA--ATGTITAFYTVLLEDAEMSDPIGEE 340 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387 +RS+LDGHIVL+ LA G YP +D SVSRL + + + + R+E+ Sbjct: 341 IRSLLDGHIVLSPKLAGAGHYPAIDVRNSVSRLMSQLVDSAASTTATRCREWLARYEDAE 400 Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +G Y G D LD A+ + FLKQ Sbjct: 401 LLLQLGEYHEGGDPALDSAIAAHGDLVAFLKQ 432 >gi|27904576|ref|NP_777702.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|38372222|sp|Q89AZ7|FLII_BUCBP RecName: Full=Flagellum-specific ATP synthase gi|27903973|gb|AAO26807.1| flagellum-specific ATP synthase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 454 Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 132/319 (41%), Positives = 198/319 (62%), Gaps = 4/319 (1%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LGKP+D + K ++S+ +S P ++R+ V TGIR I+ + G Sbjct: 118 GRIVDGLGKPLDNFSKIDSKYNVSLTNVSINP--LHREPVTHVLDTGIRSINGLLTIGRG 175 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 Q+IG+FA SG+GKS LL M R D VI+SL+GERGREV+EFI+ L + L +S+V+ Sbjct: 176 QKIGLFASSGLGKSVLLGMMTRYTQADIVILSLIGERGREVKEFIDSVLTETVLSRSIVI 235 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 A S+ S +++ + A+ IAEYF K +VLLI+DS+TR+A + REI+ + GELPV++ Sbjct: 236 SAPSESSVLMQTRGAIYAMRIAEYFRDKNFHVLLIMDSLTRYAMAHREISLSIGELPVSK 295 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP SVFS+L L+ER G + G+ITA +VL + + DPI++S RSILDGHI+L+R Sbjct: 296 GYPPSVFSKLFSLIERAGNGKINSGSITAFFTVLTEEEERYDPISESARSILDGHIILSR 355 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 AE G YP ++ S+SR+ + ++ ++ RD+ +G Y G D Sbjct: 356 EYAESGHYPAINIENSISRVMPNIVDSSHYSFACHFKKIVSLYQRNRDLINVGAYISGTD 415 Query: 401 LILDKAVHQVPIIYDFLKQ 419 LD A+ +P + FL+Q Sbjct: 416 PDLDMAITLIPKLNKFLQQ 434 >gi|82524593|ref|YP_406188.1| ATP synthase SpaL [Shigella dysenteriae Sd197] gi|81243991|gb|ABB64700.1| Spa47 [Shigella dysenteriae Sd197] Length = 430 Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161 G V+N LG+ D ++ + PP + R +EK F TG++VID G Sbjct: 93 GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219 QR+G+FA +G GK+ L++M D +I L+GERGREV E + DYL ++ KKS V+ Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETV-DYLKNSEKKSRCVL 211 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATSD S + R A A IAE+F ++G V L +DS+TR+A ++R++A +GE P Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF LPRLLER G K G+ITA +VL++ D+ DP+A+ VRSILDGHI L+ Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA++G++P +D L S+SR+ + + + ++ L+ EE R I G Y+PG Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGE 390 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 + DK +++ ++ FLKQ Sbjct: 391 NASQDKIYNKISVVESFLKQ 410 >gi|32307042|gb|AAP79012.1| Spa47 [Shigella flexneri] gi|320182862|gb|EFW57737.1| Type III secretion cytoplasmic ATP synthase [Shigella flexneri CDC 796-83] Length = 430 Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161 G V+N LG+ D ++ + PP + R +EK F TG++VID G Sbjct: 93 GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219 QR+G+FA +G GK+ L++M D +I L+GERGREV E + DYL ++ KKS V+ Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETV-DYLKNSEKKSRCVL 211 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATSD S + R A A IAE+F ++G V L +DS+TR+A ++R++A +GE P Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF LPRLLER G K G+ITA +VL++ D+ DP+A+ VRSILDGHI L+ Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA++G++P +D L S+SR+ + + + ++ L+ EE R I G Y+PG Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMATAFRELLSEIEELRTIIDFGEYKPGE 390 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 + DK +++ ++ FLKQ Sbjct: 391 NASQDKIYNKISVVESFLKQ 410 >gi|296282263|ref|ZP_06860261.1| FliI/YscN family ATPase [Citromicrobium bathyomarinum JL354] Length = 443 Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 133/327 (40%), Positives = 188/327 (57%), Gaps = 16/327 (4%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-------MNRQRVEKGFKTGIRVID 153 + GR ++A G+PIDG + + + PA ++R V + F TGIR ++ Sbjct: 102 FLGRAVDASGQPIDGGGPV--------LARREWPAGGWRTGALDRASVSQPFDTGIRSLN 153 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GD 212 T L GQR+G+ AGSG+GKS L+ M D +++ L+GER REV +F+ ++ G Sbjct: 154 ALTTLGVGQRVGIMAGSGVGKSVLMDMIVGGAEADAIVVGLIGERAREVSDFVSRHMNGP 213 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 +++ +V +D + LR + A +IAE S+G VLLILDS+TR AH+ REI Sbjct: 214 AGERTAIVAVPADHAANLRLRGAMLATSIAEEMRSQGKKVLLILDSLTRVAHAAREIGML 273 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE ARGYP S S + +L+ER G S + G IT + +VL DGD+ NDP+ D+ RSIL Sbjct: 274 LGEPGAARGYPPSALSTITKLIERAGNSAETGGAITGIYTVLADGDDQNDPVVDTARSIL 333 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIVL+R +A+ GRYP VD AS+SR+ + L +EE RD+ L+ Sbjct: 334 DGHIVLSRDIAQRGRYPAVDVGASLSRVMNDIVPPAHVVAARKFRALNATYEENRDLVLM 393 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQ 419 G YRPG D LDKA+ + FL Q Sbjct: 394 GAYRPGQDATLDKAIAMHAGMSAFLGQ 420 >gi|194435188|ref|ZP_03067418.1| flagellum-specific ATP synthase [Shigella dysenteriae 1012] gi|194416567|gb|EDX32706.1| flagellum-specific ATP synthase [Shigella dysenteriae 1012] Length = 430 Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161 G V+N LG+ D ++ + PP + R +EK F TG++VID G Sbjct: 93 GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219 QR+G+FA +G GK+ L++M D +I L+GERGREV E + DYL ++ KKS V+ Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETV-DYLKNSEKKSRCVL 211 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATSD S + R A A IAE+F ++G V L +DS+TR+A ++R++A +GE P Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF LPRLLER G K G+ITA +VL++ D+ DP+A+ VRSILDGHI L+ Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA++G++P +D L S+SR+ + + + ++ L+ EE R I G Y+PG Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGE 390 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 + DK +++ ++ FLKQ Sbjct: 391 NASQDKIYNKISVVESFLKQ 410 >gi|254463340|ref|ZP_05076756.1| flagellum-specific ATP synthase [Rhodobacterales bacterium HTCC2083] gi|206679929|gb|EDZ44416.1| flagellum-specific ATP synthase [Rhodobacteraceae bacterium HTCC2083] Length = 441 Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 131/324 (40%), Positives = 198/324 (61%), Gaps = 3/324 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 + GRV++ALG P+D + G+ S+ + + R+ + G+R ++ + Sbjct: 99 AYLGRVVDALGDPLD-EAPAPVGNDSVPLNGTFLNPLARKLIPGALDVGVRAVNGLLTIG 157 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219 GQRIG+ AGSG+GKS LL M A+ D +++ L+GER REV E + + + + + + Sbjct: 158 SGQRIGIIAGSGVGKSVLLGMMAQYTSADVIVMGLIGERAREVGEAVREIMTEEARDRIS 217 Query: 220 VVAT-SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +VA +D SP+LR A A +AE+F +G NVLLI+DS+TR AH+ REI GELP Sbjct: 218 IVAVPADRSPLLRIRAARRATALAEHFRDQGKNVLLIMDSLTRVAHAQREIGLALGELPT 277 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEK-GNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 ++GYP SV S +P L+ER G E G+IT + +VL DGD+ NDP+ D+ R+ILDGHIV Sbjct: 278 SKGYPASVVSMIPTLIERAGMGVGENSGSITGIYTVLADGDDGNDPVVDTARAILDGHIV 337 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+RS+AE G YP +D AS+SR+ + + +++ ++ + E RD+ L+GGY Sbjct: 338 LSRSIAEMGIYPAIDIPASISRVMNDIVTPEQQASARKFKRMVALYNENRDLMLMGGYVS 397 Query: 398 GVDLILDKAVHQVPIIYDFLKQSP 421 G D LD+AV P + F+ Q+P Sbjct: 398 GQDADLDEAVALWPKLVSFIGQTP 421 >gi|24215292|ref|NP_712773.1| endoflagellar biosynthesis/type III secretory pathway ATPase [Leptospira interrogans serovar Lai str. 56601] gi|45657268|ref|YP_001354.1| hypothetical protein LIC11391 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24196389|gb|AAN49791.1| endoflagellar biosynthesis/type III secretory pathway ATPase [Leptospira interrogans serovar Lai str. 56601] gi|45600506|gb|AAS69991.1| FliI [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 454 Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 146/360 (40%), Positives = 210/360 (58%), Gaps = 10/360 (2%) Query: 72 ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIM- 129 + P+G E I VF GR I GRV+N +G+PID + ++ E Sbjct: 79 LMPLGPIEGIYPEAFVFSSGRKLAIPVGKELLGRVLNGVGRPIDKKGHI----ITKEERP 134 Query: 130 --SKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 ++VP ++R + TG+R ID + GQR+G+F+GSG+GKS+LL M AR Sbjct: 135 PDNEVPNPLDRPIIRDVLMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSLLGMIARYTDA 194 Query: 188 DKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I+LVGERGREV EFIE LG + LKKSVV+ ATSD + + L A +IAEYF Sbjct: 195 DINVIALVGERGREVNEFIEIDLGKEGLKKSVVLAATSDAPKMEQVNCALLATSIAEYFR 254 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G +V L++DS+TRFA + REI+ ++ E P+ RG+ +SVFS+L +L+ER G S K G Sbjct: 255 DQGKHVNLMMDSLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERSGTS-KSGGT 313 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT +VL + D DPIAD+VR +DGHI+LNR LAE+ YP +D AS+SR+ + Sbjct: 314 ITGFYTVLTEADEMEDPIADAVRGYIDGHIILNRKLAEKNHYPAIDVPASLSRVMARIAP 373 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 D+ + LI + ++ + Y G D +D A+ + I +LKQ + S+ Sbjct: 374 EDQNLRAGMIRELISVYNSAEELIRLNAYVSGSDPKVDLAIRKKDKIDRYLKQKIQERST 433 >gi|74314948|ref|YP_313366.1| ATP synthase SpaL [Shigella sonnei Ss046] gi|73858425|gb|AAZ91131.1| Spa47 [Shigella sonnei Ss046] Length = 430 Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 5/320 (1%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLCHG 161 G V+N LG+ D ++ + PP + R +EK F TGI+VID G Sbjct: 93 GAVVNPLGEVTDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGIKVIDSLLTCGEG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VV 219 QR+G+FA +G GK+ L++M D +I L+GERGREV E + DYL ++ KK+ V+ Sbjct: 153 QRMGIFASAGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETV-DYLKNSEKKNRCVL 211 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATSD S + R A A IAE+F ++G V L +DS+TR+A ++R++A +GE P Sbjct: 212 VYATSDYSSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPAR 271 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF LPRLLER G K G+ITA +VL++ D+ DP+A+ VRSILDGHI L+ Sbjct: 272 RGYPVSVFDSLPRLLERPGKL-KAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLS 330 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 R+LA++G++P +D L S+SR+ + + + ++ L+ EE R I G Y+PG Sbjct: 331 RNLAQKGQFPAIDSLKSISRVFTQVVDEKHRIMAAAFRELLSEIEELRTIIDFGEYKPGE 390 Query: 400 DLILDKAVHQVPIIYDFLKQ 419 + DK +++ ++ FLKQ Sbjct: 391 NASQDKIYNKISVVESFLKQ 410 >gi|114799102|ref|YP_758999.1| flagellar protein export ATPase FliI [Hyphomonas neptunium ATCC 15444] gi|114739276|gb|ABI77401.1| flagellar protein export ATPase FliI [Hyphomonas neptunium ATCC 15444] Length = 462 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 141/398 (35%), Positives = 216/398 (54%), Gaps = 4/398 (1%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G ++ + + + +S+ +G+ +V + + G+++ ++ D V + I + Sbjct: 13 GTVTDVAAGMLGIAGVSELAGVGNEIVIEKQGQKIHGEILSVSGDSVTALLYSPSDIIRI 72 Query: 84 GDLVFHWGRFRISPSACWCGRVINALGK---PIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 GD+V RI P W G++IN G+ + L +S + + PA R R Sbjct: 73 GDVVHIEQEARIEPGDHWLGQIINYRGEVATEMPAGAGLTAKGVSRALRAPALPAHLRHR 132 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 + TG V D P+C GQR+G+FAGSG+GKST L A D+V+I+L+GER R Sbjct: 133 LGPRLATGWMVTDTLLPICRGQRLGLFAGSGVGKSTFLGSLAGGLEADRVVIALIGERSR 192 Query: 201 EVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+ L + ++ K+VVV AT+ ESP +K A A+ AE+F +G +VL + DSI Sbjct: 193 EVGEFVNVNLPETVRHKTVVVSATASESPGAKKRAAYCAMATAEHFRDQGHSVLFLFDSI 252 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA + RE+A +GE P +P S + L ER GP KG+IT + SVLV G + Sbjct: 253 TRFAEAHREVALLAGETPALNAFPPSTVRVIAELAERAGPGTGAKGDITGIFSVLVAGSD 312 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +P+AD +R ILDGHI+L+R++AE GRYP +D L SVSR A + E L+ + Sbjct: 313 LEEPVADMIRGILDGHIILSRNIAERGRYPAIDVLKSVSRALPAAANDWENDLLRDYRRM 372 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 I ++E + + G D D+A+ P + F+ Sbjct: 373 IALYDEVAPMLRASLFEFGRDKDADRAIALYPALDAFV 410 >gi|207108897|ref|ZP_03243059.1| flagellum-specific ATP synthase [Helicobacter pylori HPKX_438_CA4C1] Length = 268 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 125/264 (47%), Positives = 172/264 (65%), Gaps = 1/264 (0%) Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV 220 GQ++G+FAGSG+GKSTL+ M R +I+L+GERGRE+ EFIE L +L V+V Sbjct: 1 GQKLGIFAGSGVGKSTLMGMITRGCLAPIKVIALIGERGREIPEFIEKNLKGDLSSCVLV 60 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 VATSD+SP++RK A+++AEYF ++G +VL I+DS+TRFA + REI GE P ++ Sbjct: 61 VATSDDSPLMRKYGAFCAMSVAEYFKNQGLDVLFIMDSVTRFAMAQREIGLALGEPPTSK 120 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP S S LP+L+ER G E+ KG+ITA SVLV+GD+ +DPIAD RSILDGHIVL+R Sbjct: 121 GYPPSALSLLPQLMERAG-KEENKGSITAFFSVLVEGDDLSDPIADQARSILDGHIVLSR 179 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 L + G YPP++ L S SR+A S + L +E + IG Y+ G D Sbjct: 180 ELTDYGIYPPINILNSASRVAKDIISESQNLYARKFRRLYALLKENEMLIRIGSYQMGND 239 Query: 401 LILDKAVHQVPIIYDFLKQSPSDL 424 LD+A+ + ++ FL Q + L Sbjct: 240 KELDEAIKKKALMEQFLAQDENAL 263 >gi|121997297|ref|YP_001002084.1| flagellar protein export ATPase FliI [Halorhodospira halophila SL1] gi|121588702|gb|ABM61282.1| flagellar protein export ATPase FliI [Halorhodospira halophila SL1] Length = 449 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 130/297 (43%), Positives = 183/297 (61%), Gaps = 1/297 (0%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 +M++ + R + G+R I+ + GQR+G+FAGSG+GKS LL M R Sbjct: 133 LMAEPINPLERAPIAAPLDVGVRSINALFTVGRGQRMGLFAGSGVGKSVLLGMMTRYTTA 192 Query: 188 DKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D V++ L+GERGREVREFI + LG + L ++VVV A +D SP+ R + A +IAEYF Sbjct: 193 DVVVVGLIGERGREVREFITEILGRHGLARAVVVAAPADTSPLFRLHGAMRATSIAEYFR 252 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G NVLL++DS+TR+A + REI GE P +GYP SVF LPRL+ER G G+ Sbjct: 253 DQGYNVLLLMDSLTRYAQAQREIGLAIGEPPTTKGYPPSVFGLLPRLVERAGNGPDGGGS 312 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA +VLV+GD+ +PIADS R+ILDGH+VL+RSLA+ G YP VD AS+SR Sbjct: 313 ITAFYTVLVEGDDQQEPIADSARAILDGHLVLSRSLADSGVYPAVDVEASISRAMMAITE 372 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 +K L + + D+ +G Y+ G D ++D+A+ P + FL+Q S+ Sbjct: 373 GRHQKAAQRFRELYAAYRQNEDLISVGAYQRGSDPLVDQAIQYQPRLRAFLQQDVSE 429 >gi|312171089|emb|CBX79348.1| ATP synthase in type III secretion system [Erwinia amylovora ATCC BAA-2158] Length = 454 Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 156/445 (35%), Positives = 251/445 (56%), Gaps = 20/445 (4%) Query: 6 ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59 + L Q A+ + + L V + G ++ I+ + + C+ +GD + + L Sbjct: 8 QRLTQWAQQHQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 65 Query: 60 GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116 +++ + + + + +G + IS G +V + I S G V++ G+ ++ G Sbjct: 66 SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRALEPGGH 125 Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 + G ++ +++ PP R R+ TG+R ID + +GQR+G+FAG+G G Sbjct: 126 SAFAEPGTRVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232 K+TLL+ AR+ D ++ L+GERGRE+REF++ L D L+ ++V++ ATSD S + R Sbjct: 186 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRSRTVLLCATSDRSSMERA 245 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A TA IAE F ++G +VLLI+DS+TRFA + REI GE P G P SV++ LPR Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 L+ER G + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE YP +D Sbjct: 306 LVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SR L L+ +++ + +G Y+PG D + D AV+ I Sbjct: 364 VLASLSRTMSNVVEPGHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVNANDI 423 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437 I FL+QS + + D F++ +L Sbjct: 424 INQFLRQS---MRAPDPFEQTQYQL 445 >gi|331677823|ref|ZP_08378498.1| flagellar protein export ATPase FliI [Escherichia coli H591] gi|331074283|gb|EGI45603.1| flagellar protein export ATPase FliI [Escherichia coli H591] Length = 407 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 132/291 (45%), Positives = 178/291 (61%), Gaps = 2/291 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKSVLLGMMARYTRADVIVVGLIGERGREVKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 +R LAE G YP +D AS+SR S V + L+ F+ RD+ Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDL 404 >gi|292487020|ref|YP_003529890.1| ATP synthase in type III secretion system [Erwinia amylovora CFBP1430] gi|291552437|emb|CBA19482.1| ATP synthase in type III secretion system [Erwinia amylovora CFBP1430] Length = 452 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 156/445 (35%), Positives = 251/445 (56%), Gaps = 20/445 (4%) Query: 6 ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59 + L Q A+ + + L V + G ++ I+ + + C+ +GD + + L Sbjct: 6 QRLTQWAQQHQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 63 Query: 60 GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116 +++ + + + + +G + IS G +V + I S G V++ G+ ++ G Sbjct: 64 SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRALEPGGH 123 Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 + G ++ +++ PP R R+ TG+R ID + +GQR+G+FAG+G G Sbjct: 124 SAFAEPGTQVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 183 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232 K+TLL+ AR+ D ++ L+GERGRE+REF++ L D L+ ++V++ ATSD S + R Sbjct: 184 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRSRTVLLCATSDRSSMERA 243 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A TA IAE F ++G +VLLI+DS+TRFA + REI GE P G P SV++ LPR Sbjct: 244 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 303 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 L+ER G + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE YP +D Sbjct: 304 LVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 361 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SR L L+ +++ + +G Y+PG D + D AV+ I Sbjct: 362 VLASLSRTMSNVVEPGHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVNANDI 421 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437 I FL+QS + + D F++ +L Sbjct: 422 INRFLRQS---MRAPDPFEQTQYQL 443 >gi|292900595|ref|YP_003539964.1| type III secretion system protein [Erwinia amylovora ATCC 49946] gi|1181169|gb|AAB06001.1| HrcN [Erwinia amylovora] gi|291200443|emb|CBJ47572.1| type III secretion system protein [Erwinia amylovora ATCC 49946] Length = 454 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 156/445 (35%), Positives = 251/445 (56%), Gaps = 20/445 (4%) Query: 6 ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59 + L Q A+ + + L V + G ++ I+ + + C+ +GD + + L Sbjct: 8 QRLTQWAQQHQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 65 Query: 60 GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116 +++ + + + + +G + IS G +V + I S G V++ G+ ++ G Sbjct: 66 SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRALEPGGH 125 Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 + G ++ +++ PP R R+ TG+R ID + +GQR+G+FAG+G G Sbjct: 126 SAFAEPGTQVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232 K+TLL+ AR+ D ++ L+GERGRE+REF++ L D L+ ++V++ ATSD S + R Sbjct: 186 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRSRTVLLCATSDRSSMERA 245 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A TA IAE F ++G +VLLI+DS+TRFA + REI GE P G P SV++ LPR Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 L+ER G + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE YP +D Sbjct: 306 LVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SR L L+ +++ + +G Y+PG D + D AV+ I Sbjct: 364 VLASLSRTMSNVVEPGHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVNANDI 423 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437 I FL+QS + + D F++ +L Sbjct: 424 INRFLRQS---MRAPDPFEQTQYQL 445 >gi|116327838|ref|YP_797558.1| endoflagellar biosynthesis/type III secretory pathway ATPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330720|ref|YP_800438.1| endoflagellar biosynthesis/type III secretory pathway ATPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120582|gb|ABJ78625.1| Endoflagellar biosynthesis/type III secretory pathway ATPase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124409|gb|ABJ75680.1| Endoflagellar biosynthesis/type III secretory pathway ATPase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 454 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 148/365 (40%), Positives = 211/365 (57%), Gaps = 20/365 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 + P+G E I VF GR I GRV+N +G+PID KG I++ Sbjct: 79 LMPLGPIEGIYPEAFVFSSGRKLAIPVGKELLGRVLNGVGRPIDK-----KG----HIIT 129 Query: 131 K--------VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 K VP ++R + TG+R ID + GQR+G+F+GSG+GKS+LL M A Sbjct: 130 KEERGPDNDVPNPLDRPIIRDILMTGVRAIDGILTIGRGQRVGIFSGSGVGKSSLLGMIA 189 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTI 241 R D +I+LVGERGREV EFIE LG + L+KSVV+ ATSD + + L A +I Sbjct: 190 RYTNADINVIALVGERGREVNEFIEIDLGKEGLQKSVVLAATSDAPKMEQVNCALLATSI 249 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AEYF +G +V L++DS+TRFA + REI+ ++ E P+ RG+ +SVFS+L +L+ER G S Sbjct: 250 AEYFRDQGKHVNLMMDSLTRFAQANREISASNHEPPITRGFSSSVFSKLAKLVERSGTS- 308 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 K G IT +VL + D DPIAD+VR +DGHIVLNR LAE+ YP +D AS+SR+ Sbjct: 309 KSGGTITGFYTVLTEADEMEDPIADAVRGYIDGHIVLNRKLAEKNHYPAIDVPASLSRVM 368 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSP 421 + ++ + LI ++ ++ + Y G D +D A+ + I +LKQ Sbjct: 369 ARIAPENQNLRAGMIRELISVYDSAEELIRLNAYVSGSDSRVDLAIRKKDKIDRYLKQKI 428 Query: 422 SDLSS 426 + S+ Sbjct: 429 QERST 433 >gi|183220359|ref|YP_001838355.1| flagellum-specific ATP synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910474|ref|YP_001962029.1| endoflagellar biosynthesis/type III secretory pathway ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775150|gb|ABZ93451.1| Endoflagellar biosynthesis/type III secretory pathway ATPase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778781|gb|ABZ97079.1| Flagellum-specific ATP synthase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 454 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 156/396 (39%), Positives = 227/396 (57%), Gaps = 17/396 (4%) Query: 50 VHQGKNSDNLGQVIRINLDIVY-ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVIN 107 V +G + L V+ D +Y + P+G +EI VF GR ++ GRV+N Sbjct: 56 VERGSDKGYLACVLVGFKDHLYTLMPLGDTQEIFPHAFVFSSGRQITLNAGPELLGRVLN 115 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRI 164 LGKPID L ++ E + P +N R + +TG+R ID + GQRI Sbjct: 116 GLGKPIDNKGIL----ITKEERASEPRFLNPLDRPPITDILETGVRAIDGMLTVGRGQRI 171 Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVAT 223 G+F+GSG+GKS+LL M AR D +++L+GERGREV EF+ LG + L +SVV VAT Sbjct: 172 GIFSGSGVGKSSLLGMIARYTNADVNVVALIGERGREVNEFLHVELGKEALARSVVFVAT 231 Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 SD S + + A + AEYF KG +V L +DS+TR+A ++RE++ GE V +GY Sbjct: 232 SDSSKMEQVSCANLACSAAEYFREKGMSVNLYMDSLTRYAEALRELSI--GEPVVTKGYA 289 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDG-DNHNDPIADSVRSILDGHIVLNRSL 342 +SVFS++ +L+ER G S G+IT +VL D D+ +D +AD VR +DGHIVL R L Sbjct: 290 SSVFSKMAKLVERAGTSHN-GGSITGFYTVLTDAEDDMDDIVADKVRGFIDGHIVLTRKL 348 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 AE+ YP +D AS+SRL K + D S + LI +++ + DI L+ Y G D Sbjct: 349 AEQSHYPAIDVPASLSRLMQKIVNEDHYMRASIVRELISKYKNSEDIILLNAYVRGADEK 408 Query: 403 LDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +D A+ + I D+L+Q + SS + E K+L+ Sbjct: 409 IDMAIDKKSQIDDYLRQRIEEKSS---YNEAIKRLE 441 >gi|146277683|ref|YP_001167842.1| FliI/YscN family ATPase [Rhodobacter sphaeroides ATCC 17025] gi|145555924|gb|ABP70537.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides ATCC 17025] Length = 442 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 137/327 (41%), Positives = 189/327 (57%), Gaps = 7/327 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+A G P+DG L D S E + + + R V + G+R I+ + Sbjct: 104 GRVIDAEGAPLDG---LSPPDCSAEWPLAGRTMNPLARTPVSRPLDVGVRAINAALTVGQ 160 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVV 219 GQRIG+ AGSG+GKS L+ M R D +++ L+GER REV F + G+ +K + Sbjct: 161 GQRIGIVAGSGVGKSVLIEMMTRYTAADVIVVGLIGERAREVGAFAASVMQGEAARKLCM 220 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V +D SP+LR A A IAE+F ++G VLLI+DS+TR AH+ RE+ GE P A Sbjct: 221 VAVPADRSPLLRLRAARRATAIAEHFRAQGKQVLLIMDSLTRVAHAQREVGLALGEQPTA 280 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIVL 338 +GYP SV S +P L+ER GP +G ITA+ +VL DGD+ NDP+ D+ R+ILDGH VL Sbjct: 281 KGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLADGDDTTNDPVVDTARAILDGHFVL 340 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R + G YP +D SVSR + +K + L LI + + RD+ L+GGY PG Sbjct: 341 SRRQTQMGLYPAIDIPHSVSRTMNDVVDERHRKAAARLRQLISLYTDNRDLMLMGGYAPG 400 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLS 425 D LD+AV P I + Q P + S Sbjct: 401 QDADLDQAVQLWPKIRALIGQGPHEPS 427 >gi|149926089|ref|ZP_01914352.1| type III secretion protein [Limnobacter sp. MED105] gi|149825377|gb|EDM84588.1| type III secretion protein [Limnobacter sp. MED105] Length = 461 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 155/421 (36%), Positives = 231/421 (54%), Gaps = 13/421 (3%) Query: 18 NLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVG 76 N V + GY+S I + TV + V G+ + LG+V+ + +IV I + Sbjct: 24 NPVKRVGYVSEI--IVSTVRAILPDVVQGELCEIETSGGHKILGEVVAFSENIVTISCLE 81 Query: 77 IGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME-----IMS 130 ++LG V GR I S +++ +G+ +D + G LS++ ++ Sbjct: 82 SVAGVALGSRVLPLGRAHSIKASDHLLSSLLDGMGRNLDHPNDRRSGVLSVDSDARPVIQ 141 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PPA R V + T +RVID L GQR+G+FA G GKSTL++ R D V Sbjct: 142 VAPPASKRPPVSESLVTKVRVIDGLLTLGIGQRVGIFAPPGCGKSTLMAQIVRGANVDAV 201 Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 + LVGERGRE+REFIE + D + KKS V ATSD S I R A TA +IAEY +G Sbjct: 202 VFGLVGERGRELREFIEKEITDEIRKKSFFVCATSDRSAIERVRAAFTATSIAEYLRDQG 261 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VLL++DS+TR A + RE+ +GE G+ SV+S LP L+ER G E+G+ITA Sbjct: 262 KSVLLVVDSLTRLARAQRELGLMAGEPATQAGFTPSVYSILPELIERSG--RTEQGDITA 319 Query: 310 VISVLVDGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 V +VL++G+ +DPIA +S+LDGHIVL+ L E +P +DPL S+SR+ S Sbjct: 320 VFTVLMEGERIEDDPIASEAKSLLDGHIVLSTKLVERSHFPAIDPLKSLSRVMGSVTSVK 379 Query: 369 EKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 ++L S + ++E + + Y+PG D ++D+ V+ + ++ KQS S+ S Sbjct: 380 TQELASLVRRAYSLYQEVELLIRLNEYQPGTDPLVDEVVNIKASLDEWCKQSRSEPESPT 439 Query: 429 V 429 V Sbjct: 440 V 440 >gi|227820522|ref|YP_002824493.1| type III secretion component, RhcN, ATP synthase [Sinorhizobium fredii NGR234] gi|227339521|gb|ACP23740.1| type III secretion component, RhcN, ATP synthase [Sinorhizobium fredii NGR234] Length = 448 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 147/370 (39%), Positives = 210/370 (56%), Gaps = 7/370 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ + + P+G + +S V GR +I GRV+N LG+ +D D Sbjct: 67 EVVGFEEEEAVLTPIGDLDGMSTRAEVIATGRTLQIPVCDDLLGRVVNPLGEILDVSDER 126 Query: 120 G---KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 D P A+ R + + + GIR ID + GQR+G+F G+GKS+ Sbjct: 127 AIPVVTDTYYPTHRPPPHALRRDLITEPLQLGIRAIDGLLTVARGQRVGIFGEPGVGKSS 186 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAP 235 LLS R D ++I L+GERGREVREFIE LG+ ++SVVVVATSD I R A Sbjct: 187 LLSAIVRGTKADVIVIGLIGERGREVREFIEGQLGEEGRRRSVVVVATSDRPAIERVKAA 246 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 A IAEYF + +VLL++DS+TRFA + REI +GE P RGYP S+F+ LPRLLE Sbjct: 247 YAATAIAEYFRDQRRDVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSLFAALPRLLE 306 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R GP + G+ITA+ +VL +GD DP+A+ ++ILDGHI+L+ +LAE +P +D L Sbjct: 307 RAGPG--QGGSITALYTVLTEGDGTLDPVAEETKAILDGHIMLSSALAERNFFPAIDILK 364 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 S SRL + + + + L+ R+EE + +G Y G D + D+A+ + I Sbjct: 365 SRSRLMETVAGRTHRDHAARIRTLLARYEEIELLLRVGEYERGADALSDEAIDKRDAIEA 424 Query: 416 FLKQSPSDLS 425 FL+QS + S Sbjct: 425 FLQQSGDEFS 434 >gi|50121011|ref|YP_050178.1| type III secretion system protein [Pectobacterium atrosepticum SCRI1043] gi|49611537|emb|CAG74985.1| type III secretion protein [Pectobacterium atrosepticum SCRI1043] Length = 456 Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 150/397 (37%), Positives = 231/397 (58%), Gaps = 11/397 (2%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD V + +S + +++ + D ++ +G + I+ G V + RI S Sbjct: 52 IGDLCWVARQDDSQMMAEIVGFSPDNTFLSALGALDGIAQGATVTPLYQPHRIQVSERLL 111 Query: 103 GRVINALGKPI-DGDDS--LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 G V++ G+ + DG +S + G ++ ++ PP +R R+ + TG+R +D Sbjct: 112 GSVLDGFGRALEDGGESAFVEPGQVTGRTQPVLGDAPPPTSRPRISQPLPTGLRAVDGLL 171 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215 + GQR+G+FAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L D L+ Sbjct: 172 TIGQGQRVGIFAGAGCGKTTLLAELARNTPCDTIVFGLIGERGRELREFLDHELDDELRS 231 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++V+V +TSD S + R A TA IAE + ++G VLLILDS+TRFA + REI GE Sbjct: 232 RTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLILDSLTRFARAQREIGLALGE 291 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 G P SV++ LPRL+ER G + E G ITA+ SVL++ D+ NDP+AD VRS++DGH Sbjct: 292 PQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGH 349 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL R LAE+G YP +D LAS+SR D + + L+ +++ + +G Y Sbjct: 350 IVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRLGEY 409 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 +PG D + D AV+ I FL+QS + V Q+ Sbjct: 410 QPGHDELTDSAVNAHSEITQFLRQSMREPMPYGVIQQ 446 >gi|42560420|gb|AAS20380.1| HrcN [Pectobacterium atrosepticum] Length = 455 Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 150/397 (37%), Positives = 231/397 (58%), Gaps = 11/397 (2%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD V + +S + +++ + D ++ +G + I+ G V + RI S Sbjct: 51 IGDLCWVARQDDSQMMAEIVGFSPDNTFLSALGALDGIAQGATVTPLYQPHRIQVSERLL 110 Query: 103 GRVINALGKPI-DGDDS--LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 G V++ G+ + DG +S + G ++ ++ PP +R R+ + TG+R +D Sbjct: 111 GSVLDGFGRALEDGGESAFVEPGQVTGRTQPVLGDAPPPTSRPRISQPLPTGLRAVDGLL 170 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215 + GQR+G+FAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L D L+ Sbjct: 171 TIGQGQRVGIFAGAGCGKTTLLAELARNTPCDTIVFGLIGERGRELREFLDHELDDELRS 230 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++V+V +TSD S + R A TA IAE + ++G VLLILDS+TRFA + REI GE Sbjct: 231 RTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLILDSLTRFARAQREIGLALGE 290 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 G P SV++ LPRL+ER G + E G ITA+ SVL++ D+ NDP+AD VRS++DGH Sbjct: 291 PQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGH 348 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL R LAE+G YP +D LAS+SR D + + L+ +++ + +G Y Sbjct: 349 IVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRLGEY 408 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 +PG D + D AV+ I FL+QS + V Q+ Sbjct: 409 QPGHDELTDSAVNAHSEITQFLRQSMREPMPYGVIQQ 445 >gi|323388132|gb|ADX60328.1| type III secretion cytoplasmic ATPase RscN [Pseudomonas fluorescens] Length = 452 Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 138/323 (42%), Positives = 204/323 (63%), Gaps = 9/323 (2%) Query: 103 GRVINALGKPIDGD--DSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 G+V++ G+PI GD + + D++ ++ + P R R+ + TG+R ID L Sbjct: 109 GQVLDGFGRPIAGDGPSAFVEADIAEASTVLCEAPLPTERPRISRALSTGVRSIDGLITL 168 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217 GQR+G+FAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L D L+ K+ Sbjct: 169 GEGQRVGLFAGAGCGKTTLLAEIARNVECDVIVFGLIGERGRELREFLDHELDDQLRAKA 228 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 V+V ATSD S + R A TA +AE F KG VLL++DS+TRFA + REI +GE P Sbjct: 229 VLVCATSDRSSMERARAAFTATALAEGFRRKGQRVLLLIDSLTRFARAQREIGLAAGE-P 287 Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 + RG P SV+S +PRL+ER G + G ITA+ +VL++ D+ NDP+AD VRS+LDGHI Sbjct: 288 LGRGGLPPSVYSLMPRLVERAGLTRD--GVITAIYTVLIEQDSMNDPVADEVRSLLDGHI 345 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LAE G YP VD L S+SR+ + + + ++L L+ +++ + +G Y+ Sbjct: 346 VLSRKLAERGHYPAVDVLGSLSRILSNVATPEHIRAGTALRRLLSAYQQIELMLKLGEYQ 405 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 PG D + D AV + FL+Q Sbjct: 406 PGSDALTDLAVDSRQAVDGFLRQ 428 >gi|146305082|ref|YP_001185547.1| FliI/YscN family ATPase [Pseudomonas mendocina ymp] gi|145573283|gb|ABP82815.1| ATPase, FliI/YscN family [Pseudomonas mendocina ymp] Length = 452 Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 155/422 (36%), Positives = 241/422 (57%), Gaps = 19/422 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S+++ + + C +G+ V + S+ L +++ D + +G + I Sbjct: 29 GRVSAVSGIL--LECQVPAAKVGELCEVSKADGSNMLAEIVGFTPDCTLLSALGTPDGIQ 86 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS---LGKGDL--SMEIMSKVPPAM 136 +G + G RI G V++ G+P+ G G D ++ +++ P Sbjct: 87 VGATIRPLGIAHRIGVDDSLLGSVLDGFGRPLLGQAQGAFAGPHDARQTLPVIADALPPT 146 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R R+ TGIR ID L GQR+G+FAG+G GK+TL++ AR+ D ++ L+G Sbjct: 147 QRPRITTALPTGIRSIDSAMLLGEGQRVGLFAGAGCGKTTLMAELARNMACDVIVFGLIG 206 Query: 197 ERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGRE+REF++ L D L+K SV+V ATSD S + R A TA IAE + ++G VLL+ Sbjct: 207 ERGRELREFLDHELDDTLRKRSVLVCATSDRSSMERARAAFTATAIAEAYRARGLKVLLL 266 Query: 256 LDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +DS+TRFA + REI +GE P+ RG P SV++ LP+L+ER G SE G+ITA+ +VL Sbjct: 267 IDSLTRFARAQREIGIAAGE-PLGRGGLPPSVYTLLPQLVERAGMSES--GSITALYTVL 323 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 ++ D+ NDP+AD VRS+LDGHIV++R LAE+G YP +D AS+SR+ + ++ + Sbjct: 324 IEQDSMNDPVADEVRSLLDGHIVMSRKLAEKGHYPAIDVPASISRVLSNVAPREHQRANN 383 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ-----SPSDLSSEDV 429 L L+ + + + +G Y+PG D + D AV I FL+Q SP ++ E + Sbjct: 384 RLRRLMAAYRQVEMLLRLGEYQPGTDPVTDCAVQLHEPINAFLRQDLREPSPLPVTLEAL 443 Query: 430 FQ 431 Q Sbjct: 444 MQ 445 >gi|167030910|gb|ABZ05778.1| HrcN [Pectobacterium carotovorum subsp. carotovorum] Length = 455 Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 149/397 (37%), Positives = 229/397 (57%), Gaps = 11/397 (2%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD V + +S + +V+ + D ++ +G + I+ G V + I S Sbjct: 51 IGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGALDGIAQGAAVTPLYQPHCIQVSDRLL 110 Query: 103 GRVINALGKPI-DGDDSL-----GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 G V++ G+ + DG +S + ++ PP +R R+ + F TG+R +D Sbjct: 111 GSVLDGFGRALEDGGESAFVEPGHATGRTQPVLGDAPPPTSRPRISQPFPTGLRAVDGLL 170 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215 + GQR+G+FAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L D L+ Sbjct: 171 TIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRS 230 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++V+V +TSD S + R A TA IAE + ++G VLLI+DS+TRFA + REI GE Sbjct: 231 RTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLIIDSLTRFARAQREIGLALGE 290 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 G P SV++ LPRL+ER G + E G ITA+ SVL++ D+ NDP+AD VRS++DGH Sbjct: 291 PQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGH 348 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL R LAE+G YP +D LAS+SR D + + L+ +++ + +G Y Sbjct: 349 IVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRLGEY 408 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 +PG D++ D AV+ I FL+QS + V Q+ Sbjct: 409 QPGHDVLTDSAVNAQAEITQFLRQSMREPMPYGVIQQ 445 >gi|66044464|ref|YP_234305.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. syringae B728a] gi|63255171|gb|AAY36267.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. syringae B728a] Length = 449 Score = 235 bits (600), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 160/424 (37%), Positives = 238/424 (56%), Gaps = 19/424 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + S V GD V + S L +++ + + +G + I Sbjct: 26 GRVSAVRGILLECKIPSAKV--GDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQ 83 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135 +G + G RI G V++ G+P+ GD LG ++ +++ P Sbjct: 84 VGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGD-CLGAFAGPEDRRTTLPVIADALPP 142 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 R R+ + TGIR ID L GQR+G+FAG+G GK+TL++ AR+ D ++ L+ Sbjct: 143 TQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLI 202 Query: 196 GERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGRE+REF++ L + L++ SV+V ATSD S + R A TA IAE F ++G VLL Sbjct: 203 GERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLL 262 Query: 255 ILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 +LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G+ITA+ +V Sbjct: 263 LLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTV 319 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373 L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ + ++ Sbjct: 320 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRAN 379 Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 + L L+ +++ + +G Y+ G D + D AV I FL+Q DL QE Sbjct: 380 NRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLREPVPLQET 436 Query: 434 TKKL 437 +L Sbjct: 437 LDRL 440 >gi|330950818|gb|EGH51078.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae Cit 7] Length = 449 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 159/424 (37%), Positives = 239/424 (56%), Gaps = 19/424 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + + C +GD V + S L +++ + + +G + I Sbjct: 26 GRVSAVRGIL--LECRIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQ 83 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135 +G + G RI G V++ G+P+ GD LG ++ +++ P Sbjct: 84 VGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGD-CLGAFAGPEDRRTTLPVIADALPP 142 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 R R+ + TGIR ID L GQR+G+FAG+G GK+TL++ AR+ D ++ L+ Sbjct: 143 TQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLI 202 Query: 196 GERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGRE+REF++ L + L++ SV+V ATSD S + R A TA IAE F ++G VLL Sbjct: 203 GERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLL 262 Query: 255 ILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 +LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G+ITA+ +V Sbjct: 263 LLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTV 319 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373 L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ + ++ Sbjct: 320 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRAN 379 Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 + L L+ +++ + +G Y+ G D + D AV I FL+Q DL QE Sbjct: 380 NRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLREPVPLQET 436 Query: 434 TKKL 437 +L Sbjct: 437 LDRL 440 >gi|225850269|ref|YP_002730503.1| flagellar protein export ATPase FliI [Persephonella marina EX-H1] gi|225645680|gb|ACO03866.1| flagellar protein export ATPase FliI [Persephonella marina EX-H1] Length = 443 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 141/364 (38%), Positives = 215/364 (59%), Gaps = 13/364 (3%) Query: 82 SLGDLVFHWGRFRISPSACWCGR-----VINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 ++G V W R P + G V++ GKP++ D ++ + P + Sbjct: 66 TIGIRVGSWVEARQEPVSIEVGEELLGTVLDPFGKPLNKDRINPSHHYYLKNATINP--L 123 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 +R+R+++ G+R I+ + GQRIG+F+G+G+GKSTLL M +R D +I+L+G Sbjct: 124 DRERIKEPLDVGVRSINALLTIGKGQRIGIFSGAGVGKSTLLGMISRFTEADVNVIALIG 183 Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREVREFIED LG+ LKKSVV+VATSD++P+ + A +A+ +A++FS+ G NVL + Sbjct: 184 ERGREVREFIEDNLGEEGLKKSVVIVATSDQTPLAKIRAAYSAIAVAKFFSNSGKNVLFL 243 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 LDS+TR A + REI GE P +GY SVF+ LP+ +E+ G + +G+IT + +VLV Sbjct: 244 LDSLTRLAMAQREIGLAVGEPPTTKGYTPSVFALLPKFIEQAG-NFYNRGSITGIYTVLV 302 Query: 316 DGDNHN-DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 +GD+ DP+AD+ LDGHIVL+R LA + +P +D L SVSRL + S D K Sbjct: 303 EGDDITMDPVADAAMGFLDGHIVLSRELANKRVFPAIDVLKSVSRLMPQIVSDDILKYQG 362 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434 T + + E D+ +G Y+ G +D A+ + F+KQ D+ + E Sbjct: 363 IFTEIESIYREAEDMINLGLYKKGTTPKVDLAIQMHSRMEGFIKQ---DMHKKVTLNESF 419 Query: 435 KKLQ 438 K+L+ Sbjct: 420 KQLE 423 >gi|28868608|ref|NP_791227.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. tomato str. DC3000] gi|213968259|ref|ZP_03396403.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. tomato T1] gi|301381812|ref|ZP_07230230.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. tomato Max13] gi|302062003|ref|ZP_07253544.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. tomato K40] gi|302135085|ref|ZP_07261075.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. tomato NCPPB 1108] gi|34098490|sp|Q887B5|HRCN_PSESM RecName: Full=Type III secretion ATP synthase HrcN gi|28851846|gb|AAO54922.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. tomato str. DC3000] gi|213926897|gb|EEB60448.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. tomato T1] gi|331015098|gb|EGH95154.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 449 Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 155/405 (38%), Positives = 233/405 (57%), Gaps = 14/405 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + + C +GD V + S L +++ + + +G + I Sbjct: 26 GRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQ 83 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SMEIMSKVPPAM 136 +G + G RI G V++ G+P+ GD G D ++ +++ P Sbjct: 84 VGAPIRPLGIAHRIGVDDTLLGCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPT 143 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R R+ + TGIR ID L GQR+G+FAG+G GK+TL++ AR+ D ++ L+G Sbjct: 144 QRPRITRSLPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLIG 203 Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F ++G VLL+ Sbjct: 204 ERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLL 263 Query: 256 LDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G+ITA+ +VL Sbjct: 264 LDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTVL 320 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 ++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ D ++ + Sbjct: 321 IEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGRDHQRANN 380 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L L+ +++ + +G Y+ G D + D AV I FL+Q Sbjct: 381 RLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ 425 >gi|226326430|ref|ZP_03801948.1| hypothetical protein PROPEN_00278 [Proteus penneri ATCC 35198] gi|225205213|gb|EEG87567.1| hypothetical protein PROPEN_00278 [Proteus penneri ATCC 35198] Length = 338 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 125/307 (40%), Positives = 194/307 (63%), Gaps = 7/307 (2%) Query: 133 PPAMN-RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP+ N R + F++G+R +D GQR+G+FA +G GK+ L++MF R D + Sbjct: 32 PPSFNDRLPINTLFQSGVRAVDGLLSCGLGQRMGIFASAGTGKTMLMNMFIRFSQADIFV 91 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I L+GERGREV EF+E+ D+ KK+V++ +TSD+ + R A L A T+AEYF +G Sbjct: 92 IGLIGERGREVTEFVEELKSDSRCKKTVLICSTSDQPAVDRCNAALVATTVAEYFREQGK 151 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +V+L +DSITR+ ++R++A +GELPV +GYP SVF +LP +LER P + G+ITA Sbjct: 152 HVVLFIDSITRYCRALRDVALTAGELPVRKGYPASVFDKLPAILER--PGVTKVGSITAF 209 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VL++ D+ D I + VRSILDGHI L+R +A G YP +D L SVSR+ + S ++ Sbjct: 210 YTVLLESDDEPDAIGEEVRSILDGHIYLSRKIAASGHYPAIDILGSVSRVFQQITSEKQQ 269 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVF 430 + + ++ R ++ + ++ +G Y G + + D+AV++ +I FL QS + F Sbjct: 270 QAALKVRQILMRLQDIKLLQELGEYHAGDNALNDEAVNKQALIERFLVQS---FKEKAEF 326 Query: 431 QEITKKL 437 QE +KL Sbjct: 327 QETQEKL 333 >gi|237800785|ref|ZP_04589246.1| type III secretion component [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023643|gb|EGI03700.1| type III secretion component [Pseudomonas syringae pv. oryzae str. 1_6] Length = 345 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 136/341 (39%), Positives = 195/341 (57%), Gaps = 5/341 (1%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPL 158 GRVI+ +G+ +DG L + PPA +RQR+ K G+R ID L Sbjct: 6 ALLGRVISPMGEFLDGPAPAAAIGLQRYPLHAEPPAPFSRQRIVKPLSLGVRAIDSLLTL 65 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV 218 GQR+G+F G+GKS+LL+ R+ D ++I L+GERGREVRE +E L + Sbjct: 66 AQGQRMGIFGEPGVGKSSLLASIVRNSNVDVIVIGLIGERGREVRELLEGQLDAAARART 125 Query: 219 VVVATSDESPILRKM-APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 V V + + P ++ A A T+AEY +G +VLL++DS+TRFA + REI GE P Sbjct: 126 VAVVATSDRPAAERVRAAYVATTLAEYHRDQGRSVLLLMDSLTRFARAQREIGLAVGEPP 185 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 RGYP S FS LPRLLER GP G+ITA+ +VL +GD DP+A+ RSILDGHIV Sbjct: 186 TRRGYPPSFFSALPRLLERAGPG--PSGSITALYTVLTEGDASMDPVAEETRSILDGHIV 243 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+ +A+ +P +D L S SRL D + + ++L S + LI R ++ + +G Y Sbjct: 244 LSADMAQRDHFPAIDVLRSRSRLMDHIATPEHRQLASRMRELIARRQQIELLIQVGEYAA 303 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437 G D + D+A+ + I FL+Q ++ S E ++ K L Sbjct: 304 GSDPVADEAIARHSAIEAFLRQPAAEHDSLEQTLSQMRKVL 344 >gi|82470762|gb|ABB77414.1| HrcN [Pantoea stewartii subsp. stewartii] Length = 454 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 154/423 (36%), Positives = 242/423 (57%), Gaps = 15/423 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEIS 82 G ++ I + + C +GD + Q D L +++ + + + + +G + IS Sbjct: 31 GKVTGINGIL--IECSLPGARIGDLCLIQRSEGDAVLSEIVGFSAEHILLSALGALDGIS 88 Query: 83 LGDLVFH-WGRFRISPSACWCGRVINALGKPID--GDDSLGKGDL---SMEIMSKVPPAM 136 G L+ + I S G V++ G+ ++ G + + L ++ +++ PP Sbjct: 89 QGALITPLYLPHSICVSERLMGSVLDGFGRALEPGGYSAFAEPGLQCTTVPVLNDAPPPT 148 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R R++ TG+R ID + GQR+GVFAG+G GK+TLL+ AR+ D ++ L+G Sbjct: 149 ERPRIDTVLPTGLRAIDGLLTIGKGQRVGVFAGAGCGKTTLLAELARNSPCDVIVFGLIG 208 Query: 197 ERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGRE+REF++ L D L+K ++++ ATSD S + R A TA IAE F ++G +VLLI Sbjct: 209 ERGRELREFLDHELDDTLRKRTILLCATSDRSSMERARAAFTATAIAEAFRAEGKSVLLI 268 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TRFA + REI GE P G P SV++ LPRL+ER G + KG ITA+ SVL+ Sbjct: 269 IDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPRLVERAG--QTRKGAITALYSVLI 326 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + D+ DP+AD VRS++DGHIVL+R LAE YP +D LAS+SR K V + Sbjct: 327 EQDSMGDPVADEVRSLIDGHIVLSRRLAERNHYPAIDILASLSRTMSNVVDQVHLKQVGN 386 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 + LI +++ + +G Y+PG D++ D AV+ I FL+Q+ + + + F+ I Sbjct: 387 IRSLIAAYKQVEVLIRLGEYQPGHDILTDAAVNANDTINHFLRQT---MRTPEPFEHILS 443 Query: 436 KLQ 438 +L Sbjct: 444 QLN 446 >gi|51103049|gb|AAT96195.1| HrcN [Pseudomonas viridiflava] Length = 450 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 157/407 (38%), Positives = 235/407 (57%), Gaps = 18/407 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + + C +GD V + S L +++ D + +G + I Sbjct: 27 GRVSAVRGIL--LECKLPAAKVGDLCEVSKADGSLLLAEIVGFTPDCTLLSALGAPDGIQ 84 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135 +G + G RI G V++ G+P+ GD +LG ++ +++ P Sbjct: 85 VGATIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGD-ALGAFAGPDDRRTTLPVIADALPP 143 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISL 194 R R+ + TG+R ID L GQR+G+FAG+G GK+TL++ AR+ DC D ++ L Sbjct: 144 TQRPRISRALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFGL 202 Query: 195 VGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253 +GERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F KG VL Sbjct: 203 IGERGRELREFLDHELDETLRSRSVLVCATSDRSSMERARAAFTATAIAEAFREKGQKVL 262 Query: 254 LILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 L+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G+ITA+ + Sbjct: 263 LLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYT 319 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ + ++ Sbjct: 320 VLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRA 379 Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + L L+ +++ + +G Y+ G D + D AV I FL+Q Sbjct: 380 NNRLRQLMAAYKQVEMLLRLGEYQAGSDPVTDCAVKLNEDINAFLRQ 426 >gi|227114172|ref|ZP_03827828.1| type III secretion protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 455 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 150/397 (37%), Positives = 230/397 (57%), Gaps = 11/397 (2%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD V + +S + +V+ + D ++ +G + I+ G V + I S Sbjct: 51 IGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGALDGIAQGATVTPLYQPHCIQVSERLL 110 Query: 103 GRVINALGKPI-DGDDS--LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 G V++ G+ + DG +S + G S ++ PP +R R+ + TG+R +D Sbjct: 111 GSVLDGFGRALEDGGESAFVEPGQASGRTQPVLGDAPPPTSRPRISQPLPTGLRAVDGLL 170 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215 + GQR+G+FAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L D L+ Sbjct: 171 TIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRS 230 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++V+V +TSD S + R A TA IAE + ++G VLLI+DS+TRFA + REI GE Sbjct: 231 RTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLIIDSLTRFARAQREIGLALGE 290 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 G P SV++ LPRL+ER G + E G ITA+ SVL++ D+ NDP+AD VRS++DGH Sbjct: 291 PQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGH 348 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL R LAE+G YP +D LAS+SR D + + L+ +++ + +G Y Sbjct: 349 IVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRLGEY 408 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 +PG D++ D AV+ I FL+QS + V Q+ Sbjct: 409 QPGHDVLTDSAVNAQAEITQFLRQSMREPMPYGVIQQ 445 >gi|188532670|ref|YP_001906467.1| HrcN protein (hrp cluster) [Erwinia tasmaniensis Et1/99] gi|188027712|emb|CAO95565.1| HrcN protein (hrp cluster) [Erwinia tasmaniensis Et1/99] Length = 454 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 154/445 (34%), Positives = 250/445 (56%), Gaps = 20/445 (4%) Query: 6 ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59 ++L Q A+ + L V + G ++ I+ + + C +GD + + L Sbjct: 8 QSLTQWAQRQQQRLEGYAPVSRYGRVTGISGIL--IECTLPGARIGDLCRIQRSDGGSVL 65 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWCGRVINALGKPID--GD 116 +++ + + + + +G + IS G ++ + I S G V++ G+ ++ G Sbjct: 66 SEIVGFSPEKILLSALGALDGISQGAIIIPLYLPHSICVSERLLGSVLDGFGRALEPGGH 125 Query: 117 DSLGKGDL---SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 + K ++ +++ PP R R++ TG+R ID + +GQR+G+FAG+G G Sbjct: 126 SAFAKPGTKVRAVPVLNDAPPPTERPRIDTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232 K+TLL+ AR+ D ++ L+GERGRE+REF++ L + L+ ++V++ ATSD S + R Sbjct: 186 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEELRSRTVLLCATSDRSSMERA 245 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A TA IAE F ++G +VLLI+DS+TRFA + REI GE P G P SV++ LPR Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 L+ER G + +G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE YP +D Sbjct: 306 LVERAG--QTRQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SR + L L+ +++ + +G Y+PG D + D AV+ I Sbjct: 364 ILASLSRTMSNVVEPTHMQQAGRLRSLMAAYQQVEMLIRLGEYQPGNDGLTDAAVNANDI 423 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437 I FL+QS + + D F++ L Sbjct: 424 INRFLRQS---MRAPDPFEQTQYHL 445 >gi|94495432|ref|ZP_01302012.1| ATPase FliI/YscN [Sphingomonas sp. SKA58] gi|94424820|gb|EAT09841.1| ATPase FliI/YscN [Sphingomonas sp. SKA58] Length = 442 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 192/317 (60%), Gaps = 1/317 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+A+G+P+D + G + + ++R RV + F G+R ++ GQ Sbjct: 106 GRVIDAMGQPLDRKGPIITGG-TWPLNGVKGNVLDRGRVTEPFDLGVRAVNALLTAGRGQ 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 RI + AGSG+GKS L+ D V+ L+GERGREV +F+E L + + KS+VV Sbjct: 165 RIAIIAGSGVGKSVLMGQMIAGAEADIVVTGLIGERGREVSDFLETKLKNAMHKSIVVAV 224 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 +D P+LR A A IAEYF ++G VLL++DS+TR AH+ REI GE P +GY Sbjct: 225 PADHPPVLRLRAAARATAIAEYFRARGKKVLLLIDSLTRCAHAQREIGLALGEPPAMKGY 284 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S + +PRL+ER G + G+ITA+ +VL DGD+ +DPI D+ R+I+DGH VL+R L Sbjct: 285 PPSALALIPRLVERAGVDARTGGSITALYTVLADGDDTDDPIVDAARAIVDGHFVLSRQL 344 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 +E+ +P +D S+SR+ D ++ + L +EE RD+ L+G YRPG D + Sbjct: 345 SEQAIFPAIDIGKSLSRVMADVVPDDHRQAAAGYRRLWAAYEENRDLILMGAYRPGNDPV 404 Query: 403 LDKAVHQVPIIYDFLKQ 419 +D+AV + I DF++Q Sbjct: 405 IDEAVKRRQEILDFIRQ 421 >gi|310766422|gb|ADP11372.1| hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrcN protein [Erwinia sp. Ejp617] Length = 454 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 155/445 (34%), Positives = 250/445 (56%), Gaps = 20/445 (4%) Query: 6 ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59 + L Q A+ + L V + G ++ I+ + + C+ +GD + + L Sbjct: 8 QRLTQWADQQQRRLERYAPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 65 Query: 60 GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116 +++ + + + + +G + IS G +V + I S G V++ G+ ++ G Sbjct: 66 SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRALEPGGH 125 Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 + G ++ +++ PP R R+ TG+R ID + +GQR+G+FAG+G G Sbjct: 126 SAFAEPGSQVRAVPVLNDAPPPTERPRIATPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232 K+TLL+ AR+ D ++ L+GERGRE+REF++ L + L+ ++V++ ATSD S + R Sbjct: 186 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEELRSRTVLLCATSDRSSMERA 245 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A TA IAE F ++G +VLLI+DS+TRFA + REI GE P G P SV++ LPR Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 L+ER G + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE YP +D Sbjct: 306 LVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SR L L+ +++ + +G Y+PG D + D AV+ I Sbjct: 364 VLASLSRTMSNVVEPHHMMHAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVNANDI 423 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437 I FL+QS + + D F++ +L Sbjct: 424 INQFLRQS---MRAPDPFEQTQYQL 445 >gi|226941275|ref|YP_002796349.1| FliI1 [Laribacter hongkongensis HLHK9] gi|226716202|gb|ACO75340.1| FliI1 [Laribacter hongkongensis HLHK9] Length = 463 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 151/416 (36%), Positives = 230/416 (55%), Gaps = 23/416 (5%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 GY++ +T + + V G +V + G+ + +V+ N D++Y+ PV + + Sbjct: 29 GYLTRVTGLVMEAVGVRLPVGGGAWVTLPDGRRIE--AEVVGFNGDVLYLMPVSSVQGLL 86 Query: 83 LGDLV-FHW-----------------GRFRISPSACWCGRVINALGKPIDGDDSLGKGDL 124 G V W G R+ GR++++LG+P+D + Sbjct: 87 PGAAVEPDWPVSPPVFGHAATLDAAQGGRRVPVGMKLLGRIVDSLGRPLDEAGPVHPDTF 146 Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 + + P ++R V G+R I+ + GQR+G+FAGSG+GKS LL M A+ Sbjct: 147 YPLHAAPINP-LDRDPVRSSMDVGVRAINGLLTVGRGQRLGLFAGSGVGKSVLLGMMAKY 205 Query: 185 DCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D V++ L+GERGREV++FIE+ LG+ L ++VVV A +D P++R A +AE Sbjct: 206 TRADVVVVGLIGERGREVKDFIENILGEEGLARAVVVAAPADTPPLMRLHGAAYATALAE 265 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 Y+ +G +VLL++DS+TR+A + REIA GE PV RGYP SVF++LP+L+ER G Sbjct: 266 YYRDQGLDVLLLMDSVTRYAMAQREIALAIGEPPVTRGYPPSVFAKLPQLIERAGNGRAG 325 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+ITA +VL +GD+ DP+ADS R+ILDGH VLNR LAE G YP +D S+SR+ Sbjct: 326 GGSITAFYTVLSEGDDQQDPVADSSRAILDGHFVLNRRLAEAGHYPAIDIEQSISRVMVD 385 Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 SAD R++ D+ +G Y G D +LD+A+ + ++ FL Q Sbjct: 386 VVSADHVASARRFKQFYSRYQRNLDLISVGAYVSGADPMLDEAIRRHDMMESFLIQ 441 >gi|34098419|sp|Q52371|HRCN_PSESY RecName: Full=Type III secretion ATP synthase HrcN Length = 449 Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 159/424 (37%), Positives = 238/424 (56%), Gaps = 19/424 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + + C +GD V + S L +++ + + +G + I Sbjct: 26 GRVSAVRRIL--LECRIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQ 83 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135 +G + G RI G V++ G+P+ GD LG ++ +++ P Sbjct: 84 VGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGD-CLGAFAGPEDRRTTLPVIADALPP 142 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 R R+ + TGIR ID L GQR+G+FAG+G GK+TL++ AR+ D ++ L+ Sbjct: 143 TQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLI 202 Query: 196 GERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGRE+REF++ L + L++ SV+V ATSD S + R A TA IAE F ++G VLL Sbjct: 203 GERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLL 262 Query: 255 ILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 +LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G+ITA+ +V Sbjct: 263 LLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTV 319 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373 L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ ++ Sbjct: 320 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGRKHQRAN 379 Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 + L L+ +++ + +G Y+ G D + D AV I FL+Q DL QE Sbjct: 380 NRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLREPVPLQET 436 Query: 434 TKKL 437 +L Sbjct: 437 LDRL 440 >gi|320182744|gb|EFW57628.1| Flagellum-specific ATP synthase FliI [Shigella boydii ATCC 9905] Length = 412 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 130/291 (44%), Positives = 177/291 (60%), Gaps = 2/291 (0%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV++ GKP+DG S + I P + R +E TG+R I+ + Sbjct: 115 ALLGRVLDGSGKPLDGLPSPDTTETGALITPPFNP-LQRTPIEHVLDTGVRPINALLTVG 173 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSV 218 GQR+G+FAGSG+GK LL M AR D +++ L+GERGRE+++FIE+ LG + +SV Sbjct: 174 RGQRMGLFAGSGVGKGVLLGMMARYTRADVIVVGLIGERGRELKDFIENILGAEGRARSV 233 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE P Sbjct: 234 VIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPA 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGHIVL Sbjct: 294 TKGYPPSVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVL 353 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 +R LAE G YP +D AS+SR S V + L+ F+ RD+ Sbjct: 354 SRRLAEAGHYPAIDIEASISRAMTALISEQHYARVRTFKQLLSSFQRNRDL 404 >gi|284007403|emb|CBA72815.1| type III secretion cytoplasmic ATP synthase YscN,SpaL,MxiB,HrcN,EscN,InvC [Arsenophonus nasoniae] Length = 411 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 141/350 (40%), Positives = 209/350 (59%), Gaps = 12/350 (3%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIR 150 ++SP+ C VIN++G I +G L+ E I P + R+ ++ F TGI+ Sbjct: 67 KLSPNLLGC--VINSMGH-IAERFKENRGLLTNEKRGINQSPPNYLQRKPIQHPFVTGIK 123 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 ID GQR+G+FA +G GK++L+ M + D +I+L+GERGRE+ EF+ D L Sbjct: 124 AIDGLITCGIGQRLGIFASAGCGKTSLIHMMIQHASADIFVIALIGERGRELTEFV-DTL 182 Query: 211 GD--NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 ++ K V+V ATSD S I R A L A TIAEYF G NV+L LDSITR++ ++R+ Sbjct: 183 KQTGHIDKCVIVYATSDYSSIDRVNAALVATTIAEYFRDAGSNVVLFLDSITRYSRALRD 242 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 +A +GE P RGYP SVF LP+LLER P +KG ITA ++L++ D+ DPIA+ + Sbjct: 243 VALAAGEPPARRGYPASVFEALPKLLER--PGLTQKGGITAFYTILLENDDEPDPIAEEI 300 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 RSILDGHI LNR LAE+ YP + L S+SR+A + V+ + ++ + EE + Sbjct: 301 RSILDGHIYLNRKLAEKSHYPAISILQSISRVASQICDQKHLSHVAQVKKILSKIEELKI 360 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437 +G Y+ G + D+ +++ I ++L QSP + S E + QE+ + L Sbjct: 361 FIDLGEYKEGENRENDEMLYKYNKINNWLMQSPDEKKSFESIKQEMYEIL 410 >gi|167574489|ref|ZP_02367363.1| type III secretion system ATPase [Burkholderia oklahomensis C6786] Length = 358 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 139/345 (40%), Positives = 203/345 (58%), Gaps = 6/345 (1%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 RI+ GRV++ +G+P+D ++ +++ P + R ++ G+R ID Sbjct: 11 RIAVGDFLLGRVVDGVGRPLDDGPAIPDDATRIDLDRAAPDPLARTVIDTPLPLGVRAID 70 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 GQRIG+FA +G GKSTLL M D +++L+GERGREVREF+E L Sbjct: 71 GVLTCGRGQRIGIFAAAGGGKSTLLGMICDGSLADVTVLALIGERGREVREFLERTLTPQ 130 Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 + ++VVVV+TSD + R A TA IAE+F +G +VLL++DS+TRFA + REI Sbjct: 131 ARARAVVVVSTSDRPALERLKAAYTATAIAEHFRDQGGDVLLMMDSLTRFARAAREIGLA 190 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 +GE P A YP S F+ LPRLLER GP+ G+IT + +VLV+GD+ N+P+AD VRSIL Sbjct: 191 AGEKPAAGSYPPSFFARLPRLLERAGPA--ATGSITGLYTVLVEGDDMNEPVADEVRSIL 248 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIVL+R LA+ YP +D ASVSR+ + A L + L L + + + + Sbjct: 249 DGHIVLSRKLAQANHYPAIDVGASVSRVMAQIVDARHLALAARLRRLDAVYRDIELLVRV 308 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 G Y+PG D D A+ + I FL Q ++ ++ F++ +L Sbjct: 309 GEYQPGRDPEADDALARRDAIRRFLCQP---VTEKNTFEQTIDQL 350 >gi|330963050|gb|EGH63310.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. actinidiae str. M302091] Length = 449 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 156/406 (38%), Positives = 236/406 (58%), Gaps = 16/406 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + + C +GD V + S L +++ + + +G + I Sbjct: 26 GRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQ 83 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SMEIMSKVPPAM 136 +G + G RI G V++ G+P+ GD G D ++ +++ P Sbjct: 84 VGAPIRPLGIAHRIGVDDTLLGCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPT 143 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISLV 195 R R+ + TGIR ID L GQR+G+FAG+G GK+TL++ AR+ DC D ++ L+ Sbjct: 144 QRPRITRSLPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFGLI 202 Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F ++G VLL Sbjct: 203 GERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLL 262 Query: 255 ILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 +LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G+ITA+ +V Sbjct: 263 LLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTV 319 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373 L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ + + ++ Sbjct: 320 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTNREHQRAN 379 Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + L L+ +++ + +G Y+ G D + D AV I FL+Q Sbjct: 380 NRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ 425 >gi|289623678|ref|ZP_06456632.1| type III secretion component protein HrcN [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289647648|ref|ZP_06478991.1| type III secretion component protein HrcN [Pseudomonas syringae pv. aesculi str. 2250] gi|330871282|gb|EGH05991.1| type III secretion component protein HrcN [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 449 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%) Query: 14 DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72 DYS V G +S++ + + C +GD V + S L +++ + + Sbjct: 18 DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73 Query: 73 CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126 +G + I +G + G RI G V++ G+P+ GD G D ++ Sbjct: 74 SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGSDDRRETL 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 +++ P R R+ TG+R ID L GQR+G+FAG+G GK+TL++ AR+ Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D ++ L+GERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304 ++G VLL+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + ++ + L L+ +++ + +G Y+ G D + D AV I +FL+Q Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ 425 >gi|298485954|ref|ZP_07004029.1| type III secretion system cytoplasmic ATPase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298159540|gb|EFI00586.1| type III secretion system cytoplasmic ATPase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 449 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%) Query: 14 DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72 DYS V G +S++ + + C +GD V + S L +++ + + Sbjct: 18 DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73 Query: 73 CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126 +G + I +G + G RI G V++ G+P+ GD G D ++ Sbjct: 74 SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGSDDRRETL 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 +++ P R R+ TG+R ID L GQR+G+FAG+G GK+TL++ AR+ Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D ++ L+GERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304 ++G VLL+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + ++ + L L+ +++ + +G Y+ G D + D AV I +FL+Q Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ 425 >gi|307293807|ref|ZP_07573651.1| ATPase, FliI/YscN family [Sphingobium chlorophenolicum L-1] gi|306879958|gb|EFN11175.1| ATPase, FliI/YscN family [Sphingobium chlorophenolicum L-1] Length = 442 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 192/317 (60%), Gaps = 1/317 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+A+G+P+D + G S + ++R RV + F G+R ++ GQ Sbjct: 106 GRVIDAMGQPLDRKGPIIAGG-SWPLNGVKGNVLDRGRVTEPFDLGVRAVNALLTAGRGQ 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 RI + AGSG+GKS L+ + D V+ L+GERGREV +F+E L + KS+VV Sbjct: 165 RIAIIAGSGVGKSVLMGQMIQGAEADIVVAGLIGERGREVSDFLETKLKGAMHKSIVVAV 224 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 +D P+LR A A IAEYF ++G VLL++DS+TR AH+ REI GE P +GY Sbjct: 225 PADHPPVLRLRAAARATAIAEYFRARGKKVLLLIDSLTRCAHAQREIGLALGEPPAMKGY 284 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S + +PRL+ER G + G+ITA+ +VL DGD+ +DPI D+ R+I+DGH VL+R L Sbjct: 285 PPSALALIPRLVERAGVDTRSGGSITALYTVLADGDDTDDPIVDAARAIVDGHFVLSRHL 344 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 +E+ +P +D S+SR+ + + ++ L +EE RD+ L+G YRPG D + Sbjct: 345 SEQAIFPAIDVGKSLSRVMADVVPDEHRMAAAAYRRLWAAYEENRDLILMGAYRPGNDPV 404 Query: 403 LDKAVHQVPIIYDFLKQ 419 +D+AV + I DF++Q Sbjct: 405 IDEAVQRRQEILDFIRQ 421 >gi|34098601|sp|Q8RK01|HRCN_PSESH RecName: Full=Type III secretion ATP synthase HrcN gi|19262914|emb|CAD22886.1| putative ATPase [Pseudomonas syringae pv. phaseolicola] Length = 449 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%) Query: 14 DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72 DYS V G +S++ + + C +GD V + S L +++ + + Sbjct: 18 DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73 Query: 73 CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126 +G + I +G + G RI G V++ G+P+ GD G D ++ Sbjct: 74 SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPDDRRETL 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 +++ P R R+ TG+R ID L GQR+G+FAG+G GK+TL++ AR+ Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYF 245 D ++ L+GERGRE+REF++ L + L++ SV+V ATSD S + R A TA IAE F Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304 ++G VLL+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + ++ + L L+ +++ + +G Y+ G D + D AV I +FL+Q Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ 425 >gi|11276511|gb|AAG33879.1| HrcN [Pseudomonas syringae pv. tomato] Length = 419 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 154/385 (40%), Positives = 227/385 (58%), Gaps = 14/385 (3%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWC 102 +GD V + S L +++ + + +G + I +G + G RI Sbjct: 15 VGDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDTLL 74 Query: 103 GRVINALGKPIDGD---DSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 G V++ G+P+ GD G D ++ +++ P R R+ + TGIR ID Sbjct: 75 GCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPTQRPRITRSLPTGIRAIDSAIL 134 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISLVGERGREVREFIEDYLGDNLK- 215 L GQR+G+FAG+G GK+TL++ AR+ DC D ++ L+GERGRE+REF++ L + L+ Sbjct: 135 LGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFGLIGERGRELREFLDHELDETLRA 193 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 +SV+V ATSD S + R A TA IAE F ++G VLL+LDS+TRFA + REI SGE Sbjct: 194 RSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLLLDSLTRFARAQREIGIASGE 253 Query: 276 LPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 P+ RG P SV++ LPRL+ER G SE G+ITA+ +VL++ D+ NDP+AD VRS+LDG Sbjct: 254 -PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTVLIEQDSMNDPVADEVRSLLDG 310 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+R LAE G YP +D AS+SR+ D ++ + L L+ +++ + +G Sbjct: 311 HIVLSRKLAERGHYPAIDVSASISRILSNVTGRDHQRANNRLRQLLAAYKQVEMLLRLGE 370 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 Y+ G D + D AV I FL+Q Sbjct: 371 YQAGADPVTDCAVQLNDAINAFLRQ 395 >gi|294013066|ref|YP_003546526.1| flagellum-specific ATP synthase FliI [Sphingobium japonicum UT26S] gi|292676396|dbj|BAI97914.1| flagellum-specific ATP synthase FliI [Sphingobium japonicum UT26S] Length = 442 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 129/317 (40%), Positives = 192/317 (60%), Gaps = 1/317 (0%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+A+G+P+D + G S + ++R RV + F G+R ++ GQ Sbjct: 106 GRVIDAMGQPLDRKGPIIAGG-SWPLNGVKGNVLDRGRVTEPFDLGVRAVNALLTAGRGQ 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVA 222 RI + AGSG+GKS L+ + D V+ L+GERGREV +F+E L + KS+VV Sbjct: 165 RIAIIAGSGVGKSVLMGQMIQGAEADIVVAGLIGERGREVSDFLETKLKGAMHKSIVVAV 224 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 +D P+LR A A IAEYF ++G VLL++DS+TR AH+ REI GE P +GY Sbjct: 225 PADHPPVLRLRAAARATAIAEYFRARGKKVLLLIDSLTRCAHAQREIGLALGEPPAMKGY 284 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P S + +PRL+ER G + G+ITA+ +VL DGD+ +DPI D+ R+I+DGH VL+R L Sbjct: 285 PPSALALIPRLVERAGVDARSGGSITALYTVLADGDDTDDPIVDAARAIVDGHFVLSRHL 344 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLI 402 +E+ +P +D S+SR+ + + ++ L +EE RD+ L+G YRPG D + Sbjct: 345 SEQAIFPAIDVGKSLSRVMADVVPDEHRMAAAAYRRLWAAYEENRDLILMGAYRPGNDPV 404 Query: 403 LDKAVHQVPIIYDFLKQ 419 +D+AV + I DF++Q Sbjct: 405 IDEAVQRRQEILDFIRQ 421 >gi|152990375|ref|YP_001356097.1| flagellar-specific ATP synthase FliI [Nitratiruptor sp. SB155-2] gi|151422236|dbj|BAF69740.1| flagellar-specific ATP synthase FliI [Nitratiruptor sp. SB155-2] Length = 431 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 131/343 (38%), Positives = 214/343 (62%), Gaps = 6/343 (1%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 +I A G V++ G P++ + + +S++ + P + R+R++ G+R I+ Sbjct: 77 KIGVGADLLGTVLDPFGNPLNKEKLQFETKVSLKNETINP--LLRERIKTPLDIGVRSIN 134 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-D 212 + GQRIG+FA +G+GKSTLL M +R D +I+L+GERGREVREFIED LG + Sbjct: 135 GLFTIGKGQRIGIFASAGVGKSTLLGMVSRFTSADINVIALIGERGREVREFIEDNLGKE 194 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L+KS+VVVATSD+ P+ + A A+ A YFS KG +VL ++DS+TR A + REI Sbjct: 195 GLEKSIVVVATSDQPPLAKLRAVHVAMAYASYFSKKGKDVLFLVDSLTRLAMAQREIGLL 254 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSI 331 GE P ++GY SVF+ LP+++E+ G + +G+IT + +VL +G+ +DPIAD+ Sbjct: 255 VGEPPTSKGYTPSVFTLLPKIIEQAG-TFHNQGSITGIYTVLFEGEELSSDPIADAAVGF 313 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGH+VL++ +A++ +P VDPL S+SRLA + ++ + + + ++E D+ Sbjct: 314 LDGHVVLSKEMAQKRVFPAVDPLKSISRLAPQLVPSEILEFQAQFIQIYALYKENEDMIN 373 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD-LSSEDVFQEI 433 +G Y+PG +D A+ P D+L+QS ++ ++ E F+++ Sbjct: 374 MGLYKPGSSQKIDLAIKYYPKCLDYLRQSINEPINLEKSFEDL 416 >gi|71734740|ref|YP_273549.1| type III secretion component protein HrcN [Pseudomonas syringae pv. phaseolicola 1448A] gi|42561997|gb|AAS20439.1| HrcN [Pseudomonas syringae pv. phaseolicola] gi|71555293|gb|AAZ34504.1| type III secretion component protein HrcN [Pseudomonas syringae pv. phaseolicola 1448A] gi|320322950|gb|EFW79040.1| type III secretion component protein HrcN [Pseudomonas syringae pv. glycinea str. B076] gi|320329927|gb|EFW85915.1| type III secretion component protein HrcN [Pseudomonas syringae pv. glycinea str. race 4] Length = 449 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%) Query: 14 DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72 DYS V G +S++ + + C +GD V + S L +++ + + Sbjct: 18 DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73 Query: 73 CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126 +G + I +G + G RI G V++ G+P+ GD G D ++ Sbjct: 74 SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPDDRRETL 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 +++ P R R+ TG+R ID L GQR+G+FAG+G GK+TL++ AR+ Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D ++ L+GERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304 ++G VLL+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + ++ + L L+ +++ + +G Y+ G D + D AV I +FL+Q Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINEFLRQ 425 >gi|51102994|gb|AAT96141.1| HrcN [Pseudomonas viridiflava] Length = 450 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 156/407 (38%), Positives = 235/407 (57%), Gaps = 18/407 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + + C +GD V + S L +++ D + +G + I Sbjct: 27 GRVSAVRGIL--LECKLPAAKVGDLCEVSKADGSLLLAEIVGFTPDCTLLSALGAPDGIQ 84 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135 +G + G RI G V++ G+P+ GD +LG ++ +++ P Sbjct: 85 VGATIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGD-ALGAFAGPDDRRTTLPVIADALPP 143 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISL 194 R R+ + TG+R ID L GQR+G+FAG+G GK+TL++ AR+ DC D ++ L Sbjct: 144 TQRPRISRALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFGL 202 Query: 195 VGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVL 253 +GERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F +G VL Sbjct: 203 IGERGRELREFLDHELDETLRSRSVLVCATSDRSSMERARAAFTATAIAEAFRERGQKVL 262 Query: 254 LILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 L+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G+ITA+ + Sbjct: 263 LLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYT 319 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ + ++ Sbjct: 320 VLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRA 379 Query: 373 VSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + L L+ +++ + +G Y+ G D + D AV I FL+Q Sbjct: 380 NNRLRQLMAAYKQVEMLLRLGEYQAGSDPVTDCAVKLNEDINAFLRQ 426 >gi|103488410|ref|YP_617971.1| ATPase FliI/YscN [Sphingopyxis alaskensis RB2256] gi|98978487|gb|ABF54638.1| ATPase FliI/YscN [Sphingopyxis alaskensis RB2256] Length = 443 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 138/372 (37%), Positives = 210/372 (56%), Gaps = 8/372 (2%) Query: 54 KNSDN---LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINAL 109 +++DN G+V+ + P + + G V G + P GR+++A Sbjct: 53 RSADNDYVYGEVVGFRGHRSLVLPFDTNKPLVTGAPVEPHGASSMVPVGKALLGRIMDAQ 112 Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 G P+DG ++ K + + + R RV + G+R I+ + GQR+ + AG Sbjct: 113 GNPLDGRPAI-KSQFQWPLAGRKVNPLRRGRVTRALNMGVRAINGLLTVGEGQRVAIIAG 171 Query: 170 SGIGKSTLL-SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDES 227 SG+GKS L+ M A ++C D +++ L+GER REV +F+E L ++ KKSVVV +D Sbjct: 172 SGVGKSVLMGQMIAGTEC-DVIVVGLIGERSREVSDFVETKLPPDVRKKSVVVAVPADHP 230 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 P+LR A + A IAE F ++G VLL++DS+TR AH+ REI GE P +GYP SVF Sbjct: 231 PLLRLRAAMRATAIAEAFRAEGKKVLLLIDSLTRVAHAQREIGLTLGEPPTMKGYPPSVF 290 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + +P L ER G + G++TA+ +VL DG + +DP+ DS R+I+DGHI+L+R LAE+G Sbjct: 291 ALIPSLCERAGIDKATGGSVTALYTVLADGGDIDDPVVDSARAIVDGHIILSRQLAEQGV 350 Query: 348 YPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAV 407 YP +D S+SR + AD + L +EE RD+ L+G Y G D ILD+A+ Sbjct: 351 YPAIDVARSLSRTMADSVDADHAAAAARFRQLWSLYEENRDLMLMGAYVAGADPILDEAI 410 Query: 408 HQVPIIYDFLKQ 419 + F+ Q Sbjct: 411 ARRADQLAFVSQ 422 >gi|259909714|ref|YP_002650070.1| hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrcN protein [Erwinia pyrifoliae Ep1/96] gi|224965336|emb|CAX56868.1| hrp/hrc Type III secretion system-Hrp/hrc secretion/translocation pathway-hrcN protein [Erwinia pyrifoliae Ep1/96] gi|283479800|emb|CAY75716.1| ATP synthase in type III secretion system [Erwinia pyrifoliae DSM 12163] Length = 454 Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 155/445 (34%), Positives = 249/445 (55%), Gaps = 20/445 (4%) Query: 6 ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59 + L Q A+ + L V + G ++ I+ + + C+ +GD + + L Sbjct: 8 QRLTQWADQQQRRLERYSPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 65 Query: 60 GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116 +++ + + + + +G + IS G +V + I S G V++ G+ ++ G Sbjct: 66 SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHSICVSEQLLGSVLDGFGRALEPGGR 125 Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 + G ++ +++ PP R R+ TG+R ID + +GQR+G+FAG+G G Sbjct: 126 SAFAEPGSQVRAVPVLNDAPPPTERPRIATPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRK 232 K+TLL+ AR+ D ++ L+GERGRE+REF++ L + L+ ++V++ ATSD S + R Sbjct: 186 KTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEELRSRTVLLCATSDRSSMERA 245 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A TA IAE F ++G +VLLI+DS+TRFA + REI GE P G P SV++ LPR Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSLTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 L+ER G + ++G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE YP +D Sbjct: 306 LVERAG--QTQQGAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SR L L+ +++ + +G Y+PG D + D AV+ I Sbjct: 364 VLASLSRTMSNVVEPHHMMHAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVNANDI 423 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437 I FL+QS + + D F++ L Sbjct: 424 INQFLRQS---MRAPDPFEQTQYHL 445 >gi|326794367|ref|YP_004312187.1| ATPase, FliI/YscN family [Marinomonas mediterranea MMB-1] gi|326545131|gb|ADZ90351.1| ATPase, FliI/YscN family [Marinomonas mediterranea MMB-1] Length = 468 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 150/389 (38%), Positives = 226/389 (58%), Gaps = 8/389 (2%) Query: 45 LGDFVVHQGK-NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWC 102 +GD QG+ N L ++I + DIV + +G E IS+G + H+ I Sbjct: 64 IGDLCTIQGRGNHRVLAEIIGFSSDIVLLSALGALEGISVGASIMPHYQAHCIDSDESLL 123 Query: 103 GRVINALGKPIDGDD---SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 G V++ G+ + G +L + + + +++ R R+ TG+R ID + Sbjct: 124 GSVLDGFGRLLQGKRDAFTLEESEHTSKVIRDAIAPTQRPRISAPMPTGVRAIDGLLTIG 183 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSV 218 GQRIGVFAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L + L+ +SV Sbjct: 184 EGQRIGVFAGAGCGKTTLLAELARNMPCDVIVFGLIGERGRELREFLDHELDEELRSRSV 243 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +TSD + + R A TA IAE F ++G VLL++DS+TRFA + REI +GE P Sbjct: 244 LVCSTSDRTSMERARAASTATAIAEGFRAQGKRVLLLIDSLTRFARAQREIGLAAGEPPG 303 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIV 337 G+P SV++ LPRL+ER G E G+ITA+ +VL++GD DP+AD VRS+LDGHI+ Sbjct: 304 RGGFPPSVYTMLPRLVERAGNMEG-AGSITALYTVLIEGDVIAGDPVADEVRSLLDGHII 362 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R LAE+ YP +D L S+SR + + + L +L+ ++E + +G Y Sbjct: 363 LSRKLAEKNHYPAIDVLGSISRTMPNVTDPNHIQSAAVLRNLMSAYKEVEMLIRLGEYEQ 422 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 G D + D AV I +FL+QS SS Sbjct: 423 GNDPLTDTAVALNGTILEFLQQSMRSPSS 451 >gi|330872913|gb|EGH07062.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 449 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 154/405 (38%), Positives = 233/405 (57%), Gaps = 14/405 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + + C +GD V + S L +++ + + +G + I Sbjct: 26 GRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQ 83 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SMEIMSKVPPAM 136 +G + G RI G V++ G+P+ GD G D ++ +++ P Sbjct: 84 VGAPIRPLGIAHRIGVDDTLLGCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPT 143 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R R+ + TGIR ID L GQR+G+FAG+G GK+TL++ AR+ D ++ L+G Sbjct: 144 QRPRITRSLPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLIG 203 Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F ++G VLL+ Sbjct: 204 ERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLL 263 Query: 256 LDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G+ITA+ +VL Sbjct: 264 LDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTVL 320 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 ++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ + ++ + Sbjct: 321 IEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRANN 380 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L L+ +++ + +G Y+ G D + D AV I FL+Q Sbjct: 381 RLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ 425 >gi|253688593|ref|YP_003017783.1| type III secretion apparatus H+-transporting two-sector ATPase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251755171|gb|ACT13247.1| type III secretion apparatus H+-transporting two-sector ATPase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 455 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 147/400 (36%), Positives = 229/400 (57%), Gaps = 17/400 (4%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD V + +S + +V+ + D ++ +G + I+ G V + I S Sbjct: 51 IGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGALDGIAQGATVTPLYQPHCIQVSERLL 110 Query: 103 GRVINALGKPIDGD---------DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 G V++ G+ ++ D + G+ + ++ PP +R R+ + TG+R +D Sbjct: 111 GSVLDGFGRALEDDGESAFVEPGHATGR---TQPVLGDAPPPTSRPRISQPLPTGLRAVD 167 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 + GQR+G+FAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L D Sbjct: 168 GLLTIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDE 227 Query: 214 LK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L+ ++V+V +TSD S + R A TA IAE + ++G VLLI+DS+TRFA + REI Sbjct: 228 LRSRTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLIIDSLTRFARAQREIGLA 287 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE G P SV++ LPRL+ER G + E G ITA+ SVL++ D+ NDP+AD VRS++ Sbjct: 288 LGEPQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLI 345 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 DGHIVL R LAE+G YP +D LAS+SR D + + L+ +++ + + Sbjct: 346 DGHIVLARRLAEQGHYPAIDVLASLSRTMSNVVDTDHTRNAGGVRRLMAAYKQVEMLIRL 405 Query: 393 GGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 G Y+PG D++ D AV+ I FL+QS + V Q+ Sbjct: 406 GEYQPGHDVLTDSAVNAHAEITQFLRQSMREPMPYGVIQQ 445 >gi|257487229|ref|ZP_05641270.1| type III secretion component protein HrcN [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331009157|gb|EGH89213.1| type III secretion component protein HrcN [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 449 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%) Query: 14 DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72 DYS V G +S++ + + C +GD V + S L +++ + + Sbjct: 18 DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73 Query: 73 CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126 +G + I +G + G RI G V++ G+P+ GD G+ D ++ Sbjct: 74 SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGQDDRRETL 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 +++ P R R+ TG+R ID L GQR+G+FAG+G GK+TL++ AR+ Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D ++ L+GERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304 ++G VLL+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + ++ + L L+ +++ + +G Y+ G D + D AV I FL+Q Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINAFLRQ 425 >gi|238577792|gb|ACR46703.1| HrcN [Pseudomonas syringae pv. tabaci] Length = 450 Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 157/415 (37%), Positives = 237/415 (57%), Gaps = 16/415 (3%) Query: 14 DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72 DYS V G +S++ + + C +GD V + S L +++ + + Sbjct: 19 DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 74 Query: 73 CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126 +G + I +G + G RI G V++ G+P+ GD G+ D ++ Sbjct: 75 SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGQDDRRETL 134 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 +++ P R R+ TG+R ID L GQR+G+FAG+G GK+TL++ AR+ Sbjct: 135 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 194 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D ++ L+GERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F Sbjct: 195 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 254 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304 ++G VLL+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE Sbjct: 255 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 311 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ Sbjct: 312 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 371 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + ++ + L L+ +++ + +G Y+ G D + D AV I FL+Q Sbjct: 372 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINAFLRQ 426 >gi|331092965|ref|ZP_04588468.2| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022862|gb|EGI02919.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. oryzae str. 1_6] Length = 450 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 159/424 (37%), Positives = 240/424 (56%), Gaps = 19/424 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + S V GD V + + L +++ + + +G + + Sbjct: 27 GRVSAVRGILLECKIPSAKV--GDLCEVSKADGTLMLAEIVGFTQECTLLSALGAPDGVQ 84 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS---LGKGD--LSMEIMSKVPPAM 136 +G + G RI G V++ G+P+ GD G D ++ +++ P Sbjct: 85 VGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLMGDCQGAFAGPDDRRTTLPVIADALPPT 144 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISLV 195 R R+ + TGIR ID L GQR+G+FAG+G GK+TL++ AR+ DC D ++ L+ Sbjct: 145 QRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDC-DVIVFGLI 203 Query: 196 GERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE + ++G VLL Sbjct: 204 GERGRELREFLDHELDETLRSRSVLVCATSDRSSMERARAAFTATAIAEAYRARGQKVLL 263 Query: 255 ILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 +LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE+ G+ITA+ +V Sbjct: 264 LLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEE--GSITALYTV 320 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373 L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ ++ Sbjct: 321 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTDRAHQRAN 380 Query: 374 SSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 + L L+ +++ + +G Y+ G D + D AV I FL+Q DL QE Sbjct: 381 NRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ---DLREPVPLQET 437 Query: 434 TKKL 437 +L Sbjct: 438 LDEL 441 >gi|168334483|ref|ZP_02692654.1| Flagellar biosynthesis/type III secretory pathway ATPase [Epulopiscium sp. 'N.t. morphotype B'] Length = 384 Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 136/333 (40%), Positives = 199/333 (59%), Gaps = 6/333 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDD 117 L +V+ + + P+G I G V G + I G+V++ P+DG Sbjct: 54 LAEVVGFREKNILLMPLGNNSGIGPGCPVISNGQKITIKVDESLLGKVVDWRANPLDGTP 113 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + K S+ I P + R+R+ GI+ ID + GQR+G+FAGSG+GKSTL Sbjct: 114 NRCK--FSVPIEQDAPDPLKRKRIASQMVLGIKAIDGMLSIGSGQRMGIFAGSGVGKSTL 171 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPL 236 + M AR+ D +I+L+GERGREVREF+E L + L +S+VVVATSD+ ++R A Sbjct: 172 MGMIARNAISDINVIALIGERGREVREFLEKDLKEAGLARSIVVVATSDQPALIRLKAAK 231 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 TA IAEYF +G VL ++DS+TRF+ + REI + GE PV+RGY SVF +P+LLER Sbjct: 232 TATAIAEYFRDQGKQVLFLMDSLTRFSMAQREIGLSIGEPPVSRGYTPSVFGVMPKLLER 291 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G E G IT + +VLVDGD+ N+P+ D+ R ILDGHI+L+R +A YP +D LAS Sbjct: 292 TG--NNEIGGITGLYTVLVDGDDFNEPVTDTARGILDGHIMLSRKIAHRAHYPAIDVLAS 349 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 +SR+ SA+ ++L + + + + + D+ Sbjct: 350 ISRVMGDVISAEHRELATIIKRHMAVYADVEDL 382 >gi|330984969|gb|EGH83072.1| type III secretion component protein HrcN [Pseudomonas syringae pv. lachrymans str. M301315] Length = 449 Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 157/415 (37%), Positives = 236/415 (56%), Gaps = 16/415 (3%) Query: 14 DYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYI 72 DYS V G +S++ + + C +GD V + S L +++ + + Sbjct: 18 DYSA--VRVSGRVSAVRGIL--LECKIPAAKVGDLCEVSKADGSFLLAEIVGFTQECTLL 73 Query: 73 CPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SM 126 +G + I +G + G RI G V++ G+P+ GD G D ++ Sbjct: 74 SALGAPDGIQVGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPDDRRETL 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 +++ P R R+ TG+R ID L GQR+G+FAG+G GK+TL++ AR+ Sbjct: 134 PVIADALPPTQRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMG 193 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D ++ L+GERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F Sbjct: 194 CDVIVFGLIGERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEK 304 ++G VLL+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE Sbjct: 254 RARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN-- 310 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ Sbjct: 311 GSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNV 370 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + ++ + L L+ +++ + +G Y+ G D + D AV I FL+Q Sbjct: 371 TGREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDDINAFLRQ 425 >gi|170698149|ref|ZP_02889228.1| ATPase, FliI/YscN family [Burkholderia ambifaria IOP40-10] gi|170136914|gb|EDT05163.1| ATPase, FliI/YscN family [Burkholderia ambifaria IOP40-10] Length = 434 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 127/297 (42%), Positives = 184/297 (61%), Gaps = 5/297 (1%) Query: 125 SMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 +MEI +PP R+R +E TG+R ID GQR+G+FA +G GK++L++M Sbjct: 122 AMEI-DALPPDFARRRPIEHCMPTGVRAIDGLLTCGVGQRLGIFAAAGCGKTSLMNMLID 180 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIA 242 D +++LVGERGREV EF+E + ++VVV ATSD S + R A L A T+A Sbjct: 181 HASADVYVVALVGERGREVSEFVERLRSSERRDRTVVVYATSDRSSVDRCNAALLATTVA 240 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 EYF G NV+L LDS+TR+A ++R++A +GE P RGYP SVF +PRLLER G Sbjct: 241 EYFRDCGLNVMLFLDSMTRYARALRDVALAAGEPPARRGYPASVFETMPRLLERAG--RT 298 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 G+ITA +VL++ ++ DPI D VRSILDGHI L+R LA +G +P +D L S SRL + Sbjct: 299 AAGSITAFYTVLLENEDEPDPIGDEVRSILDGHIYLSRKLASQGHFPAIDVLQSASRLLE 358 Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +AD + + + R +E + + +G YR G + D+++ + P++ FL+Q Sbjct: 359 AVTTADHQARARQIRGHLARLDEMQILVDLGEYRTGENPDNDRSMDKRPVLEQFLQQ 415 >gi|77463627|ref|YP_353131.1| flagellum-specific ATPase FliI [Rhodobacter sphaeroides 2.4.1] gi|1293928|gb|AAB07344.1| FliI [Rhodobacter sphaeroides] gi|77388045|gb|ABA79230.1| FliI, Flagellum-specific ATPase [Rhodobacter sphaeroides 2.4.1] Length = 442 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 139/349 (39%), Positives = 195/349 (55%), Gaps = 16/349 (4%) Query: 87 VFHWGRFRISPSA-------CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAM 136 V R R+ P GRVI+A G P+DG D +G+ L+ +M+ + Sbjct: 81 VIAGARVRLVPGGQMAAVGPALLGRVIDAEGAPLDGLPAPDCMGEWPLAGRVMNP----L 136 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R V + G+R I+ + GQRIG+ AGSG+GKS L+ M R D +++ L+G Sbjct: 137 ARTAVSRPLDVGVRAINAALTVGQGQRIGIVAGSGVGKSVLIEMMTRYTAADVIVVGLIG 196 Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ER REV F + G+ +K +V +D SP+LR A A IAE+F S+G VLLI Sbjct: 197 ERAREVGAFAASVMQGEAARKLCMVAVPADRSPLLRLRAARRATAIAEHFRSEGKQVLLI 256 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TR AH+ RE+ GE P A+GYP SV S +P L+ER GP +G ITA+ +VL Sbjct: 257 MDSLTRVAHAQREVGLALGEQPTAKGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLA 316 Query: 316 DGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 DGD+ NDP+ D+ R+ILDGH VL+R + G YP +D SVSR + ++ + Sbjct: 317 DGDDTTNDPVVDTARAILDGHFVLSRRQTQMGLYPAIDIPHSVSRTMNDVVDDRHRRAAA 376 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L LI + + RD+ L+GGY G D LD+AV P I + Q P + Sbjct: 377 RLRQLIALYSDNRDLMLMGGYAAGQDADLDQAVQLWPRIRALIGQGPHE 425 >gi|82795273|gb|ABB91642.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. tagetis] Length = 449 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 152/405 (37%), Positives = 231/405 (57%), Gaps = 14/405 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + + C +GD V + L +++ + + +G + I Sbjct: 26 GRVSAVRGIL--LECKIPAAKVGDLCEVSKADGGMLLAEIVGFTQECTLLSALGAPDGIQ 83 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGD---DSLGKGDL--SMEIMSKVPPAM 136 +G + G RI G V++ G+P+ GD G D ++ +++ P Sbjct: 84 VGAPIRPLGIAHRIGVDDSLLGCVLDGFGRPLLGDCLGAFAGPEDRRETLPVIADALPPT 143 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R R+ TG+R ID L GQR+G+FAG+G GK+TL++ AR+ D ++ L+G Sbjct: 144 QRPRITNALPTGVRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMGCDVIVFGLIG 203 Query: 197 ERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGRE+REF++ L + L+ +SV+V ATSD S + R A TA IAE F ++G VLL+ Sbjct: 204 ERGRELREFLDHELDETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLL 263 Query: 256 LDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G+ITA+ +VL Sbjct: 264 LDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GSITALYTVL 320 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 ++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ + ++ + Sbjct: 321 IEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQRANN 380 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L L+ +++ + +G Y+ G D + D AV I FL+Q Sbjct: 381 RLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQ 425 >gi|312597797|gb|ADQ89912.1| RscN [Pseudomonas fluorescens] Length = 452 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 144/343 (41%), Positives = 210/343 (61%), Gaps = 14/343 (4%) Query: 103 GRVINALGKPI-DGDDSLGKGDLSM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 G+V++ G+P+ DG G + E++ + P R R+++ +TG+R ID L Sbjct: 109 GQVLDGFGRPLLDGGTGAFAGPHVLHASEVIGEAPAPTARPRIQRPLRTGVRAIDGPLTL 168 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISLVGERGREVREFIEDYLGDNLK-K 216 GQR+G+FAG+G GK+TLL+ AR+ DC D ++ L+GERGRE+REF++ L D L+ + Sbjct: 169 GEGQRVGLFAGAGCGKTTLLAEIARNVDC-DVIVFGLIGERGRELREFLDHELDDELRAR 227 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V+V ATSD S + R A TA +AE F ++G VLL++DS+TRFA + REI +GE Sbjct: 228 AVLVCATSDRSSMERARAAFTATALAEGFRARGQRVLLLIDSLTRFARAQREIGLAAGE- 286 Query: 277 PVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P+ RG P SV+ LPRL+ER G + + G ITA +VL++ D+ NDP+AD VRS+LDGH Sbjct: 287 PLGRGGLPPSVYGLLPRLVERAGLTNE--GAITAFYTVLIEQDSMNDPVADEVRSLLDGH 344 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL+R LAE G YP +D LAS+SR A+ + +L L+ +E+ + +G Y Sbjct: 345 IVLSRKLAERGHYPAIDVLASLSRTLANVAEAEHLRAGINLRRLLSAYEQIELMLRLGEY 404 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + G D + D AV + FL+Q DL + F LQ Sbjct: 405 QAGADPLTDLAVESRGALDAFLRQ---DLREPEPFASTLAHLQ 444 >gi|163783985|ref|ZP_02178950.1| flagellum-specific ATP synthase [Hydrogenivirga sp. 128-5-R1-1] gi|159880745|gb|EDP74284.1| flagellum-specific ATP synthase [Hydrogenivirga sp. 128-5-R1-1] Length = 440 Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 139/339 (41%), Positives = 210/339 (61%), Gaps = 11/339 (3%) Query: 102 CGRVINALGKPIDGDDS--LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 G +I+ G P++ + + DL E ++ + R+R+ + G+RVI+ + Sbjct: 91 IGNIIDPFGNPLNNKNLKLFDRVDLYQEPVN----PLQRKRITEVLDIGVRVINSLFTIG 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218 GQR+G+ AG+G+GKS+LL M A+ D +I+L+GERGREVREFIED LGD LKKSV Sbjct: 147 KGQRVGIVAGAGVGKSSLLGMIAKFSQADLNVIALIGERGREVREFIEDNLGDEGLKKSV 206 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VVVATSD+ P+ + A TA IA YF++KG +V L+ DS+TR A + REI +GE P Sbjct: 207 VVVATSDQPPLAKIRAAHTANAIASYFANKGKSVNLLFDSLTRLAMAQREIGLIAGEPPT 266 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN-HNDPIADSVRSILDGHIV 337 +GY SVF+ LP+++E G +KG+IT +VLV+GD+ +DP+AD+ S LDGHI+ Sbjct: 267 TKGYTPSVFNLLPKIIEVAG--NFDKGSITGFYTVLVEGDDVSSDPVADAAISFLDGHII 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 L+R +A++ YP VD L S+SRL + S + KK S + L + E D+ +G Y+ Sbjct: 325 LSREIADKRIYPAVDILRSISRLMPQLVSDEIKKYQSIIMDLESTYREAEDMINLGLYKK 384 Query: 398 GVDLILDKAVHQVPIIYDFLKQS-PSDLSSEDVFQEITK 435 G + +D A+ I +F++Q+ ++ E+ E+ K Sbjct: 385 GSNPKMDIALKFHYSIINFIRQNFNKKVNFEESINELNK 423 >gi|126462459|ref|YP_001043573.1| FliI/YscN family ATPase [Rhodobacter sphaeroides ATCC 17029] gi|332558483|ref|ZP_08412805.1| FliI/YscN family ATPase [Rhodobacter sphaeroides WS8N] gi|126104123|gb|ABN76801.1| ATPase, FliI/YscN family [Rhodobacter sphaeroides ATCC 17029] gi|332276195|gb|EGJ21510.1| FliI/YscN family ATPase [Rhodobacter sphaeroides WS8N] Length = 442 Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 139/349 (39%), Positives = 195/349 (55%), Gaps = 16/349 (4%) Query: 87 VFHWGRFRISPS-------ACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAM 136 V R R+ P + GRVI+A G P+DG D G+ L+ +M+ + Sbjct: 81 VIAGARVRLVPGGQMAAVGSALLGRVIDAEGAPLDGLPAPDCTGEWPLAGRVMNP----L 136 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R V + G+R I+ + GQRIG+ AGSG+GKS L+ M R D +++ L+G Sbjct: 137 ARTAVSRPLDVGVRAINAALTVGQGQRIGIVAGSGVGKSVLIEMMTRYTAADVIVVGLIG 196 Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ER REV F + G+ +K +V +D SP+LR A A IAE+F S+G VLLI Sbjct: 197 ERAREVGAFAASVMQGEAARKLCMVAVPADRSPLLRLRAARRATAIAEHFRSEGKQVLLI 256 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TR AH+ RE+ GE P A+GYP SV S +P L+ER GP +G ITA+ +VL Sbjct: 257 MDSLTRVAHAQREVGLALGEQPTAKGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLA 316 Query: 316 DGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 DGD+ NDP+ D+ R+ILDGH VL+R + G YP +D SVSR + ++ + Sbjct: 317 DGDDTTNDPVVDTARAILDGHFVLSRRQTQMGLYPAIDIPHSVSRTMNDVVDDRHRRAAA 376 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L LI + + RD+ L+GGY G D LD+AV P I + Q P + Sbjct: 377 RLRQLIALYSDNRDLMLMGGYAAGQDADLDQAVQLWPRIRALIGQGPHE 425 >gi|51103198|gb|AAT96339.1| HrcN [Pseudomonas viridiflava] Length = 451 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 141/332 (42%), Positives = 199/332 (59%), Gaps = 9/332 (2%) Query: 103 GRVINALGKPIDGDD----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 G V++ G+ + GD +L + ++ PPA R R++ TG+R ID L Sbjct: 108 GAVLDGFGRSLSGDGPSAFALSGAVGAQPVIRDAPPATERPRIDAPLSTGLRSIDGLLTL 167 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217 GQR+G+FAG+G GK+TLL+ AR+ + ++ L+GERGRE+REF++ L + L+ ++ Sbjct: 168 GEGQRVGIFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRQRT 227 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 V+V +TSD S + R A TA IAE F +G + LLI+DS+TRFA + REI SGE P Sbjct: 228 VLVCSTSDRSSMERARAAFTATAIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGE-P 286 Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 RG P SV+S LPRL+ER G ITA+ SVL++ D+ NDPIAD VRS+LDGHI Sbjct: 287 AGRGGLPPSVYSLLPRLVERAG--RTHDAAITALYSVLIEQDSMNDPIADEVRSLLDGHI 344 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LAE G YP VD L S+SR ++ + + L+ +++ + +G Y+ Sbjct: 345 VLSRKLAERGHYPAVDILTSLSRTMSNVVGTEQVHGATQVRRLMAAYQQVEMLIKLGEYQ 404 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 PG D + D AV I FL+QS D S D Sbjct: 405 PGNDPLTDFAVQSRDQIMGFLQQSLRDPVSLD 436 >gi|51103157|gb|AAT96299.1| HrcN [Pseudomonas viridiflava] Length = 451 Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 141/332 (42%), Positives = 199/332 (59%), Gaps = 9/332 (2%) Query: 103 GRVINALGKPIDGDD----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 G V++ G+ + GD +L + ++ PPA R R++ TG+R ID L Sbjct: 108 GAVLDGFGRSLSGDGPSAFALSGAVGAQPVIRDAPPATERPRIDTPLSTGLRSIDGLLTL 167 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217 GQR+G+FAG+G GK+TLL+ AR+ + ++ L+GERGRE+REF++ L + L+ ++ Sbjct: 168 GEGQRVGIFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRQRT 227 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 V+V +TSD S + R A TA IAE F +G + LLI+DS+TRFA + REI SGE P Sbjct: 228 VLVCSTSDRSSMERARAAFTATAIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGE-P 286 Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 RG P SV+S LPRL+ER G ITA+ SVL++ D+ NDPIAD VRS+LDGHI Sbjct: 287 AGRGGLPPSVYSLLPRLVERAG--RTHDAAITALYSVLIEQDSMNDPIADEVRSLLDGHI 344 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LAE G YP VD L S+SR ++ + + L+ +++ + +G Y+ Sbjct: 345 VLSRKLAERGHYPAVDILTSLSRTMSNVVGTEQVHGATQVRRLMAAYQQVEMLIKLGEYQ 404 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 PG D + D AV I FL+QS D S D Sbjct: 405 PGNDPLTDFAVQSRDRIMGFLQQSLRDPVSLD 436 >gi|51103115|gb|AAT96258.1| HrcN [Pseudomonas viridiflava] Length = 451 Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 141/332 (42%), Positives = 199/332 (59%), Gaps = 9/332 (2%) Query: 103 GRVINALGKPIDGDD----SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 G V++ G+ + GD +L + ++ PPA R R++ TG+R ID L Sbjct: 108 GAVLDGFGRSLSGDGPSAFALSGAVGAQPVIRDAPPATERPRIDTPLSTGLRSIDGLLTL 167 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KS 217 GQR+G+FAG+G GK+TLL+ AR+ + ++ L+GERGRE+REF++ L + L+ ++ Sbjct: 168 GEGQRVGIFAGAGCGKTTLLAEMARNTPCEAIVFGLIGERGRELREFLDHELDEELRQRT 227 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 V+V +TSD S + R A TA IAE F +G + LLI+DS+TRFA + REI SGE P Sbjct: 228 VLVCSTSDRSSMERARAAFTATAIAEGFRQQGKSTLLIIDSLTRFARAQREIGLASGE-P 286 Query: 278 VARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 RG P SV+S LPRL+ER G ITA+ SVL++ D+ NDPIAD VRS+LDGHI Sbjct: 287 AGRGGLPPSVYSLLPRLVERAG--RTHDAAITALYSVLIEQDSMNDPIADEVRSLLDGHI 344 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 VL+R LAE G YP VD L S+SR ++ + + L+ +++ + +G Y+ Sbjct: 345 VLSRKLAERGHYPAVDILTSLSRTMSNVVGTEQVHGATQVRRLMAAYQQVEMLIKLGEYQ 404 Query: 397 PGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 PG D + D AV I FL+QS D S D Sbjct: 405 PGNDPLTDFAVQSRDRIMGFLQQSLRDPVSLD 436 >gi|319790418|ref|YP_004152051.1| ATPase, FliI/YscN family [Thermovibrio ammonificans HB-1] gi|317114920|gb|ADU97410.1| ATPase, FliI/YscN family [Thermovibrio ammonificans HB-1] Length = 446 Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 148/379 (39%), Positives = 217/379 (57%), Gaps = 8/379 (2%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACW 101 VC+GDF GK +V+ + + I+ G+ V ++ S Sbjct: 34 VCIGDFCTVDGKLP---AEVVGFKEGKALLMAYSDTDGITTGNPVEVKLSGLKLGVSDEL 90 Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 G VI+ GK ++G + D V P M R+R+ + GIRVI+ + G Sbjct: 91 LGAVIDPFGKVLNGKE-FTPTDFVPLKPDPVNP-MERERIREPLDLGIRVINGLLTVGRG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221 QR+GVFAG+G+GKSTLL M AR D +++L+GERGREVREF+ED LGD + +SVVVV Sbjct: 149 QRLGVFAGAGVGKSTLLGMVARYTEADVTVVALIGERGREVREFLEDALGDGINRSVVVV 208 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 ATSD P+ + A A +AEYFS++G VLL+LDS+TRFA + REI + GE P ++G Sbjct: 209 ATSDMPPLAKVRAAYAAFAVAEYFSARGKKVLLLLDSLTRFAMAQREIGLSVGEPPTSKG 268 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN-DPIADSVRSILDGHIVLNR 340 Y SVFS + RL+ER G + G+IT + +VLV+GD+ + DP+AD+ +LDGHIVL+R Sbjct: 269 YTPSVFSAMARLVERAG-NFGSGGSITGIFTVLVEGDDISLDPVADAAVGLLDGHIVLSR 327 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 +A +P VD L S+SRL + + S + L + E D+ +G Y+ G Sbjct: 328 EMANRRLFPAVDVLKSISRLTPQIVPEEILTAQSVIFELESIYRENSDLIQLGLYKKGTS 387 Query: 401 LILDKAVHQVPIIYDFLKQ 419 ++D A+ + +++Q Sbjct: 388 PLIDLAIWAHSRLEGYIRQ 406 >gi|330812434|ref|YP_004356896.1| type III secretion protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380542|gb|AEA71892.1| putative type III secretion protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 452 Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 144/343 (41%), Positives = 209/343 (60%), Gaps = 14/343 (4%) Query: 103 GRVINALGKPI-DGDDSLGKGDLSM---EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 G+V++ G+P+ DG G + E++ + P R R+++ TG+R ID L Sbjct: 109 GQVLDGFGRPLLDGGTGAFAGPHVLHASEVIGEAPAPTARPRIQRPLMTGVRAIDGPLTL 168 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARS-DCFDKVIISLVGERGREVREFIEDYLGDNLK-K 216 GQR+G+FAG+G GK+TLL+ AR+ DC D ++ L+GERGRE+REF++ L D L+ + Sbjct: 169 GEGQRVGLFAGAGCGKTTLLAEIARNVDC-DVIVFGLIGERGRELREFLDHELDDELRAR 227 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V+V ATSD S + R A TA +AE F ++G VLL++DS+TRFA + REI +GE Sbjct: 228 AVLVCATSDRSSMERARAAFTATALAEGFRARGQRVLLLIDSLTRFARAQREIGLAAGE- 286 Query: 277 PVARG-YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P+ RG P SV+ LPRL+ER G + + G ITA +VL++ D+ NDP+AD VRS+LDGH Sbjct: 287 PLGRGGLPPSVYGLLPRLVERAGLTNE--GAITAFYTVLIEQDSMNDPVADEVRSLLDGH 344 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL+R LAE G YP +D LAS+SR A+ + +L L+ +E+ + +G Y Sbjct: 345 IVLSRKLAERGHYPAIDVLASLSRTLANVAEAEHLRAGINLRRLLSAYEQIELMLRLGEY 404 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 + G D + D AV + FL+Q DL + F LQ Sbjct: 405 QAGADPLTDLAVESRGALDAFLRQ---DLREPEPFASTLAHLQ 444 >gi|221639469|ref|YP_002525731.1| FliI [Rhodobacter sphaeroides KD131] gi|221160250|gb|ACM01230.1| FliI [Rhodobacter sphaeroides KD131] Length = 442 Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 139/349 (39%), Positives = 194/349 (55%), Gaps = 16/349 (4%) Query: 87 VFHWGRFRISPSACWC-------GRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAM 136 V R R+ P GRVI+A G P+DG D G+ L+ +M+ + Sbjct: 81 VIAGARVRLVPGGQMAAVGSGLLGRVIDAEGAPLDGLPAPDCTGEWPLAGRVMNP----L 136 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R V + G+R I+ + GQRIG+ AGSG+GKS L+ M R D +++ L+G Sbjct: 137 ARTAVNRPLDVGVRAINAALTVGQGQRIGIVAGSGVGKSVLIEMMTRYTAADVIVVGLIG 196 Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ER REV F + G+ +K +V +D SP+LR A A IAE+F S+G VLLI Sbjct: 197 ERAREVGAFAASVMQGEAARKLCMVAVPADRSPLLRLRAARRATAIAEHFRSEGKQVLLI 256 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TR AH+ RE+ GE P A+GYP SV S +P L+ER GP +G ITA+ +VL Sbjct: 257 MDSLTRVAHAQREVGLALGEQPTAKGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLA 316 Query: 316 DGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 DGD+ NDP+ D+ R+ILDGH VL+R + G YP +D SVSR + ++ + Sbjct: 317 DGDDTTNDPVVDTARAILDGHFVLSRRQTQMGLYPAIDIPHSVSRTMNDVVDDRHRRAAA 376 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L LI + + RD+ L+GGY G D LD+AV P I + Q P + Sbjct: 377 RLRQLIALYSDNRDLMLMGGYAAGQDADLDQAVQLWPRIRALIGQGPHE 425 >gi|76152312|gb|ABA39813.1| HrcN [Erwinia pyrifoliae] Length = 454 Score = 229 bits (584), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 154/445 (34%), Positives = 245/445 (55%), Gaps = 20/445 (4%) Query: 6 ETLAQLAEDYSKNL-----VVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNL 59 + L Q A + L V + G ++ I+ + + C+ +GD + + L Sbjct: 8 QRLTQWAHQQQRRLERYSPVSRYGRVTGISGIL--IECILPGARIGDLCRIQRSDGGSVL 65 Query: 60 GQVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPID--GD 116 +++ + + + + +G + IS G +V + RI S G V++ G+ ++ G Sbjct: 66 SEIVGFSPEKILLSALGALDGISQGATIVPLYLPHRICVSEQLLGSVLDGFGRALEPGGH 125 Query: 117 DSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 + G ++ +++ PP R R+ TG+R ID + +GQR+G+FAG+G G Sbjct: 126 SAFAEPGTQVRAVPVLNDAPPPTERPRITTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCG 185 Query: 174 KSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRK 232 K+TLL+ AR+ D ++ L+GERGRE+REF++ L + L ++V++ ATSD + R Sbjct: 186 KTTLLAELARTPRCDAIVFGLIGERGRELREFLDHELDEELLSRTVLLCATSDRISMERA 245 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 A TA IAE F ++G +VLLI+DS TRFA + REI GE P G P SV++ LPR Sbjct: 246 RAAFTATAIAEAFRAEGKSVLLIVDSFTRFARAQREIGLALGEPPGRGGLPPSVYTLLPR 305 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 L+ER G + ++G ITA+ +VL++ D+ NDP+AD VRS++DGHIVL+R LAE YP +D Sbjct: 306 LVERAG--QTQQGAITALYTVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAID 363 Query: 353 PLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPI 412 LAS+SR L L+ +++ + +G Y+PG D + D AV I Sbjct: 364 VLASLSRTMSNVVEPHHMMQAGRLRSLMAAYQQVEMLIRLGEYQPGNDSLTDAAVKPNDI 423 Query: 413 IYDFLKQSPSDLSSEDVFQEITKKL 437 I FL+QS + + D F++ L Sbjct: 424 INRFLRQS---MRAPDPFEQTQYHL 445 >gi|34500873|gb|AAQ73901.1| HrcN [Pectobacterium carotovorum subsp. carotovorum] Length = 455 Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 145/397 (36%), Positives = 227/397 (57%), Gaps = 11/397 (2%) Query: 45 LGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD V + +S + +V+ + D ++ +G + I+ G V + I S Sbjct: 51 IGDLCWVARQDDSQMMAEVVGFSPDNTFLSALGALDGIAQGATVTPLYQPHCIQVSDRLL 110 Query: 103 GRVINALGKPID--GDDSL----GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 G V++ G+ ++ G+ + + ++ PP +R R+ + TG+R +D Sbjct: 111 GSVLDGFGRALEAGGESAFVEPGHATGRTQPVLGDAPPPTSRPRISQPLPTGLRAVDGLL 170 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215 + GQR+G+FAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L D L+ Sbjct: 171 TIGQGQRVGIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDDELRS 230 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++V+V +TSD S + R A TA IAE + ++G VLLI+DS+TRFA + REI GE Sbjct: 231 RTVLVCSTSDRSSMERARAAFTATAIAEAYRAEGRQVLLIIDSLTRFARAQREIGLALGE 290 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 G P SV++ LPRL+ER G + E G ITA+ SVL++ D+ NDP+AD VRS++DGH Sbjct: 291 PQGRGGLPPSVYTLLPRLVERAG--QTEDGAITALYSVLIEQDSMNDPVADEVRSLIDGH 348 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL R LAE+G YP +D LAS+SR + + + L+ +++ + +G Y Sbjct: 349 IVLARRLAEQGHYPAIDVLASLSRTMSNVVDTEHTRNAGGVRRLMAAYKQVEMLIRLGEY 408 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 +PG D + D AV+ I FL+QS + V Q+ Sbjct: 409 QPGHDELTDSAVNAQAEITQFLRQSMREPMPYGVIQQ 445 >gi|269960166|ref|ZP_06174542.1| flagellum-specific ATP synthase [Vibrio harveyi 1DA3] gi|269835137|gb|EEZ89220.1| flagellum-specific ATP synthase [Vibrio harveyi 1DA3] Length = 350 Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 123/283 (43%), Positives = 182/283 (64%), Gaps = 5/283 (1%) Query: 61 QVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 QV+ + + Y+ P+ +G + ++ G + S+ W GRV+N LG+P D L Sbjct: 67 QVVGFDHTVAYLMPIRCLGGLFAGAKVIPLDGDSTVQLSSQWLGRVVNGLGEPFDDGLPL 126 Query: 120 GKGD-LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 GD +S+E P + R+ V+ G+R I+ + GQRIG+ AGSG+GKS L+ Sbjct: 127 KGGDRVSLEPKPINP--LKRRPVDTPLDVGVRAINGLLTVGKGQRIGLMAGSGVGKSVLM 184 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLT 237 M ++ D +++ L+GERGREVREF+E L + KK+++V A +DESP++R A L Sbjct: 185 GMITQNTEADVIVVGLIGERGREVREFVERNLTPEARKKAIIVAAPADESPLMRLRATLL 244 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 +AEYF +G +VLL++DS+TR+A + REIA + GE P +RGYP SVFS LP+LLER Sbjct: 245 CHRVAEYFRDQGKDVLLLMDSLTRYAMAQREIALSLGEPPASRGYPPSVFSVLPQLLERA 304 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 G SE G++TA+ +VL +GD+ DP+ DS R+ILDGH+VL+R Sbjct: 305 GNSENPHGSLTAIYTVLAEGDDQQDPVVDSARAILDGHVVLSR 347 >gi|1272678|emb|CAA65834.1| FliI protein [Rhodobacter sphaeroides] Length = 442 Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 139/349 (39%), Positives = 194/349 (55%), Gaps = 16/349 (4%) Query: 87 VFHWGRFRISPS-------ACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAM 136 V R R+ P + GRVI+A G P+DG D G+ L+ +M+ + Sbjct: 81 VIAGARVRLVPGGQMAAVGSALLGRVIDAEGAPLDGLPAPDCTGEWPLAGRVMNP----L 136 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG 196 R V + G+R I+ + GQRIG+ AGSG GKS L+ M R D +++ L+G Sbjct: 137 ARTAVSRPLDVGVRAINAALTVGQGQRIGIVAGSGEGKSVLIEMMTRYTAADVIVVGLIG 196 Query: 197 ERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ER REV F + G+ +K +V +D SP+LR A A IAE+F S+G VLLI Sbjct: 197 ERAREVGAFAASVMQGEAARKLCMVAVPADRSPLLRLRAARRATAIAEHFRSEGKQVLLI 256 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TR AH+ RE+ GE P A+GYP SV S +P L+ER GP +G ITA+ +VL Sbjct: 257 MDSLTRVAHAQREVGLALGEQPTAKGYPPSVVSMIPGLIERTGPGLPGEGAITAIYTVLA 316 Query: 316 DGDN-HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 DGD+ NDP+ D+ R+ILDGH VL+R + G YP +D SVSR + ++ + Sbjct: 317 DGDDTTNDPVVDTARAILDGHFVLSRRQTQMGLYPAIDIPHSVSRTMNDVVDDRHRRAAA 376 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L LI + + RD+ L+GGY G D LD+AV P I + Q P + Sbjct: 377 RLRQLIALYSDNRDLMLMGGYAAGQDADLDQAVQLWPRIRALIGQGPHE 425 >gi|187919905|ref|YP_001888936.1| ATPase, FliI/YscN family [Burkholderia phytofirmans PsJN] gi|187718343|gb|ACD19566.1| ATPase, FliI/YscN family [Burkholderia phytofirmans PsJN] Length = 442 Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 134/374 (35%), Positives = 206/374 (55%), Gaps = 12/374 (3%) Query: 58 NLGQVIRINLDIVYICPV----GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI 113 +G+V+ + + + P+ G+ + + WGR + GRV++ LG+P+ Sbjct: 57 QIGEVVGFSQEGALVVPLDGLAGLSDITQVEGCGLSWGRL---DALDMLGRVVDGLGRPL 113 Query: 114 DGD--DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 DG SM I+S + P ++R + F TG+RVID GQR+G+FA +G Sbjct: 114 DGRVAPKAVSAQHSMNILSHINP-LDRPVISTPFPTGVRVIDGLLSCGVGQRVGIFAAAG 172 Query: 172 IGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILR 231 GKSTL+ M A D ++++L+GERGREV EFI D+LG S+V+ +TS+ R Sbjct: 173 GGKSTLMGMIANGASVDAIVVALIGERGREVGEFIHDHLGARRASSIVIASTSERPAAER 232 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 A A +A ++G +VLL+ DS+TR+A ++RE+ GE PV RGYP VF+ELP Sbjct: 233 IKAAELACRVASDLRAEGKHVLLLFDSLTRYARALREVGLAVGEPPVRRGYPPRVFAELP 292 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 RL+E G + +G +TA +VL + + +DP+A+ RS+LDGHI L+ L G YP + Sbjct: 293 RLIETAGLT--RQGAVTAFFTVLAEDEEMSDPVAEEARSLLDGHIQLSGRLGGAGHYPAI 350 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVP 411 D L S SR+ + S + + + R++E + IG YR G D D A+ + Sbjct: 351 DVLKSKSRVMTRVTSRAHRDDAGRVRGWMSRYQEVELLLQIGEYRRGNDSASDLAIDRHE 410 Query: 412 IIYDFLKQSPSDLS 425 +I FL+Q + S Sbjct: 411 MIERFLRQRHDEYS 424 >gi|251789497|ref|YP_003004218.1| type III secretion apparatus H+-transporting two-sector ATPase [Dickeya zeae Ech1591] gi|247538118|gb|ACT06739.1| type III secretion apparatus H+-transporting two-sector ATPase [Dickeya zeae Ech1591] Length = 459 Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 147/396 (37%), Positives = 229/396 (57%), Gaps = 11/396 (2%) Query: 45 LGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD +V + +S L +++ + ++ +G + I+ G +V + + S Sbjct: 54 IGDLCLVERNDSSQVLAEIVGFSPSNTFLSALGALDGIAQGAVVTPLYQPHCVQVSDALF 113 Query: 103 GRVINALGKPID-GDDS--LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 G V++ G+P++ G S + GDL+ M ++ PP R R+ TG+R ID Sbjct: 114 GSVLDGFGRPLEEGGHSAFVEPGDLNANPMPVIGDAPPPTERPRIADPLPTGMRAIDGLL 173 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215 + GQR+GVFAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L + L+ Sbjct: 174 TIGCGQRVGVFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEQLRS 233 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++V+V +TSD S + R A TA IAE F + G VLLI+DS+TRFA + REI GE Sbjct: 234 RTVLVCSTSDRSSMERARAAFTATAIAEAFRAAGKQVLLIIDSLTRFARAQREIGLALGE 293 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 G P SV++ LPRL+ER G + +G ITA+ SVL++ D+ NDP+AD VRS++DGH Sbjct: 294 PQGRGGLPPSVYTLLPRLVERAG--QTRQGAITALYSVLIEQDSMNDPVADEVRSLIDGH 351 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL+R LAE YP +D L S+SR + + +++ L+ +++ + +G Y Sbjct: 352 IVLSRRLAERNHYPAIDVLMSLSRTMSNVVEREHTRNANAVRRLMAAYKQVEMLIRLGEY 411 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431 +PG D + D AV I FL+Q+ + S + Q Sbjct: 412 QPGHDALTDAAVSANDDINRFLQQAMREPQSFEFIQ 447 >gi|323978514|gb|EGB73596.1| ATPase FliI/YscN family protein [Escherichia coli TW10509] Length = 430 Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 198/332 (59%), Gaps = 5/332 (1%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGI 149 + I S + G V+NA G+ ++ + GD ++ ++ ++PP+ +RV +T I Sbjct: 82 QLTIQISDAFLGSVLNASGQIMERFVPVTPGDRGNLRLIDELPPSYQERRVINTPLETRI 141 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 RVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 142 RVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESL 201 Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++R+ Sbjct: 202 KKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRD 261 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 + +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D + Sbjct: 262 MKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEI 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ + Sbjct: 320 RSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDLQV 379 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +G YR G + D A++ P + ++LKQS Sbjct: 380 FIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 411 >gi|323966659|gb|EGB62091.1| ATPase FliI/YscN family protein [Escherichia coli M863] gi|327251620|gb|EGE63306.1| type III secretion system ATPase [Escherichia coli STEC_7v] Length = 430 Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 198/332 (59%), Gaps = 5/332 (1%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGI 149 + I S + G V+NA G+ ++ + GD ++ ++ ++PP+ +RV +T I Sbjct: 82 QLTIQISDAFLGSVLNASGQIMERFVPVTPGDRGNLRLIDELPPSYQERRVINTPLETRI 141 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 RVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 142 RVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESL 201 Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++R+ Sbjct: 202 KKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRD 261 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 + +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D + Sbjct: 262 MKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEI 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ + Sbjct: 320 RSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDLQV 379 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +G YR G + D A++ P + ++LKQS Sbjct: 380 FIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 411 >gi|14588839|emb|CAC43015.1| HrcN protein [Pantoea agglomerans] Length = 454 Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 129/294 (43%), Positives = 188/294 (63%), Gaps = 3/294 (1%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 ++S PP R R++ TG+R ID + +GQR+G+FAG+G GK+TLL+ AR+ Sbjct: 140 VLSDAPPPTERPRIDTPLPTGLRAIDGLLTIGNGQRVGIFAGAGCGKTTLLAELARNTPC 199 Query: 188 DKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D ++ L+GERGRE+REFI+ L + L K++V++ ATSD S + R A TA IAE F Sbjct: 200 DVIVFGLIGERGRELREFIDHELDETLGKRTVLLCATSDRSSMERARAAFTATAIAEAFR 259 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 ++G +VLLI+DS+TRF + REI GE P G P SV++ L RL+ER G + +G Sbjct: 260 AEGKSVLLIIDSLTRFERAQREIGIALGEPPGRGGLPPSVYTLLLRLVERAG--QTRQGA 317 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE YP +D LAS+SR Sbjct: 318 ITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAIDILASLSRTMSNVVD 377 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + + S+ L+ +++ + +G Y+PG D + D AV+ +I FL+QS Sbjct: 378 QEHLRQAGSIRSLMAAYKQVEMLIRLGEYQPGHDSLADAAVNANDVINHFLRQS 431 >gi|34498083|ref|NP_902298.1| ATP synthase SpaL [Chromobacterium violaceum ATCC 12472] gi|34103938|gb|AAQ60298.1| surface presentation of antigens, secretory proteins [Chromobacterium violaceum ATCC 12472] Length = 429 Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 126/299 (42%), Positives = 178/299 (59%), Gaps = 3/299 (1%) Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 G + +I S PP R V + TG+R ID GQR+G+FA +G GK+ L+ M Sbjct: 113 GGEARDIDSDPPPYSRRVGVREPLATGVRAIDGLLTCGVGQRVGIFASAGCGKTMLMHML 172 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVT 240 D +I L+GERGREV EF E G D + V+V ATSD + R A L A T Sbjct: 173 IEQADADVFVIGLIGERGREVTEFAEALRGSDKRDRCVLVFATSDFPSVDRCNAALLATT 232 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 +AEYF +G V+L +DS+TR+A ++R++A +GE P RGYP SVF LPRLLER P Sbjct: 233 VAEYFRDQGKKVVLFVDSMTRYARALRDVALAAGEPPARRGYPASVFDSLPRLLER--PG 290 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 G+ITA +VL++ D+ DP+AD +RSILDGHI L+R LA +G YP +D L S SR+ Sbjct: 291 ATGAGSITAFYTVLLESDDEPDPMADEIRSILDGHIYLSRKLAGQGHYPAIDVLKSASRV 350 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 A + +++ +++ L+ R EE + +G YRPG + D+A+ + +L+Q Sbjct: 351 AGQVTDTGQQQAAAAVRGLLARLEELQVFIDLGEYRPGENADNDRAMSLRDPLRRWLRQ 409 >gi|299822292|ref|ZP_07054178.1| H(+)-transporting two-sector ATPase [Listeria grayi DSM 20601] gi|299815821|gb|EFI83059.1| H(+)-transporting two-sector ATPase [Listeria grayi DSM 20601] Length = 436 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 134/331 (40%), Positives = 200/331 (60%), Gaps = 11/331 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDD 117 L +VI I + + P +++S GD V+ + I S G+V++A G+ I+GD Sbjct: 53 LCEVISIEKENNMLLPFNQTDKVSAGDWVYPNDAEVTIPASGELLGKVLSATGEVINGDP 112 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +++E PP A RQ + +TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 113 AGNTQKIALE----APPINAFARQEITDSLETGIKAIDGMLTIGIGQKIGIFAGSGVGKS 168 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M AR+ D +I+LVGERGREV++FI LG+ +KKS++V ATSDES +++ A Sbjct: 169 TLLGMIARNAKVDVNVIALVGERGREVKDFIRKDLGEEGMKKSIIVAATSDESHLMQLRA 228 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAE+F +G NVLL++DSITRFA + R + + +LP+ G + S + +LL Sbjct: 229 AKLATSIAEHFRDQGKNVLLMMDSITRFADARRSVDIATKDLPIG-GKTLLMESYMKKLL 287 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + E G+IT + +VLVDGD+ N PI D R ILDGHI+L R LA +YP + L Sbjct: 288 ERSGKT--ETGSITGIYTVLVDGDDMNGPIPDLARGILDGHIILKRELAIMNQYPAISVL 345 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 S+SR+ ++ + + + L + F+E Sbjct: 346 DSISRVMEEITTKEHFAASNKLREWLSTFQE 376 >gi|229058383|ref|ZP_04196767.1| Flagellum-specific ATP synthase [Bacillus cereus AH603] gi|228719892|gb|EEL71482.1| Flagellum-specific ATP synthase [Bacillus cereus AH603] Length = 429 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 149/380 (39%), Positives = 222/380 (58%), Gaps = 14/380 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P G E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFGQTEKVCYGDAVTLIEEDVVVPRGNHLLGKVLSANGEVLNENT 110 Query: 118 SLGKGDLSME-IMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 ++ ++ I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GK Sbjct: 111 E----NIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 166 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233 STLL M A++ D +ISLVGERGREV++FI LG+ +KKSVVVVATSDES +++ Sbjct: 167 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLR 226 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +L Sbjct: 227 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 285 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + Sbjct: 286 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 343 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412 L SVSR+ ++ S + +L + + ++ ++E +G + + + K ++V Sbjct: 344 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFKCKNKVEA 403 Query: 413 IYDFLKQSPSD-LSSEDVFQ 431 I FLKQ +D EDV Q Sbjct: 404 INTFLKQGRTDSFQFEDVVQ 423 >gi|161502062|ref|YP_001569174.1| ATP synthase SpaL [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160863409|gb|ABX20032.1| hypothetical protein SARI_00079 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 431 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 127/297 (42%), Positives = 177/297 (59%), Gaps = 3/297 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 PP +R V + TG+R ID GQR+G+FA +G GK+ L+ M D +I Sbjct: 124 PPYASRVGVHEPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTEADVFVI 183 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 L+GERGREV EF++ + K K V+V ATSD + R A A T+AEYF +G Sbjct: 184 GLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYFRDQGKR 243 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L +DS+TR+A ++R++A SGE P RGYP SVF LPRLLER P G+ITA Sbjct: 244 VVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATGDGSITAFY 301 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+ + +A K Sbjct: 302 TVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVTTATHAK 361 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 SS+ L+ R EE + +G YRPG ++ D+A+ + +L Q + SS D Sbjct: 362 QASSVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVTQYSSFD 418 >gi|85060066|ref|YP_455768.1| ATP synthase SpaL [Sodalis glossinidius str. 'morsitans'] gi|45504771|gb|AAS66861.1| InvC [Sodalis glossinidius] gi|84780586|dbj|BAE75363.1| type III secretion apparatus SpaL/InvC [Sodalis glossinidius str. 'morsitans'] Length = 431 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 138/349 (39%), Positives = 198/349 (56%), Gaps = 27/349 (7%) Query: 75 VGIGEEISLGDLVFHWGRF--RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV 132 V +G+ + LG ++ GR R++P C R A+ P Sbjct: 86 VEVGDAL-LGTIIQPSGRISERLAPPPVRCNREWRAIDAP-------------------A 125 Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-SMFARSDCFDKVI 191 P R V + F TGIR D GQR+G+F+ +G GK+ L+ + A+SD + + Sbjct: 126 PDYRQRAGVRQPFITGIRAFDGLLTCGIGQRVGIFSSAGCGKTMLMHQLIAQSDA-EVFV 184 Query: 192 ISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV EF+E + + V+V ATS+ + + R A L A T+AEYF +G Sbjct: 185 IGLVGERGREVTEFVETLRHSPRRHQCVLVYATSNYASLERCNAALVATTVAEYFRDQGR 244 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 V+L LDS+TRFA ++R++A +GE P RGYP SVF LPR+LER P G+ITA Sbjct: 245 RVVLFLDSLTRFARALRDVALAAGEAPARRGYPASVFDALPRVLER--PGNSLSGSITAF 302 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VL++GD+ DPIAD +RSILDGHI L+R L+ YP +D L S SR+A + A ++ Sbjct: 303 YTVLLEGDDEPDPIADEIRSILDGHIYLSRKLSAASHYPAIDILHSASRVAGQVTDARQQ 362 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L ++ L+ R EE + + +G YR G + D+A Q ++DFL+Q Sbjct: 363 ALAGAMRGLLTRLEEMQTLIDLGEYRLGDNAENDRAHAQKQALWDFLRQ 411 >gi|284922808|emb|CBG35896.1| type III secretion system protein [Escherichia coli 042] Length = 439 Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 132/326 (40%), Positives = 195/326 (59%), Gaps = 9/326 (2%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIF 155 + G V+NA G+ ++ D +G+L ++ ++PP+ +RV +T IRVID Sbjct: 99 AFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYKERRVINTPLETRIRVIDGV 156 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NL 214 GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E N Sbjct: 157 LTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESLKKSVNA 216 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++R++ +G Sbjct: 217 AKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRDMKLAAG 276 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D +RSILDG Sbjct: 277 EPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEIRSILDG 334 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HI L+R LA +G YP +D L SVSR+ + + + + ++ EE + +G Sbjct: 335 HIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEELQVFIDLGE 394 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS 420 YR G + D A++ P + ++LKQS Sbjct: 395 YRAGQNAENDFAMNARPKLTNWLKQS 420 >gi|300936197|ref|ZP_07151133.1| ATP synthase SpaL [Escherichia coli MS 21-1] gi|300458654|gb|EFK22147.1| ATP synthase SpaL [Escherichia coli MS 21-1] Length = 435 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 199/334 (59%), Gaps = 9/334 (2%) Query: 92 RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147 + I S + G V+NA G+ ++ D +G+L ++ ++PP+ +RV +T Sbjct: 87 QLTIHISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 144 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 IRVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 145 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 204 Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++ Sbjct: 205 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 264 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 R++ +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D Sbjct: 265 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 322 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 +RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ Sbjct: 323 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 382 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + +G YR G ++ D A++ P + ++LKQS Sbjct: 383 QVFIDLGEYRAGQNVENDFAMNARPKLTNWLKQS 416 >gi|62085070|gb|AAX62935.1| putative type III secretion apparatus protein [Escherichia coli] Length = 439 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%) Query: 92 RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147 + I S + G V+NA G+ ++ D +G+L ++ ++PP+ +RV +T Sbjct: 91 QLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNL--RLIDELPPSYQERRVINTPLET 148 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 IRVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 149 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 208 Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++ Sbjct: 209 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 268 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 R++ +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D Sbjct: 269 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 326 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 +RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ Sbjct: 327 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 386 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + +G YR G + D A++ P + ++LKQS Sbjct: 387 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 420 >gi|331654355|ref|ZP_08355355.1| invasion protein InvC [Escherichia coli M718] gi|331047737|gb|EGI19814.1| invasion protein InvC [Escherichia coli M718] Length = 439 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%) Query: 92 RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147 + I S + G V+NA G+ ++ D +G+L ++ ++PP+ +RV +T Sbjct: 91 QLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNL--RLIDELPPSYQERRVINTPLET 148 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 IRVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 149 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 208 Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++ Sbjct: 209 SLKQSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 268 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 R++ +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D Sbjct: 269 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 326 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 +RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ Sbjct: 327 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 386 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + +G YR G + D A++ P + ++LKQS Sbjct: 387 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 420 >gi|91791425|ref|YP_561076.1| ATPase FliI/YscN [Shewanella denitrificans OS217] gi|91713427|gb|ABE53353.1| ATPase FliI/YscN [Shewanella denitrificans OS217] Length = 436 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 128/333 (38%), Positives = 203/333 (60%), Gaps = 8/333 (2%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDS 118 +VI I+ V + P IS GD + G R+ + G V++A G+P+D + Sbjct: 54 AEVISISETQVKLMPFQSASGISFGDKLIGSGTSIRLPMGSGMLGHVVDAFGQPLD-EQE 112 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 LG ++ + R +++ T I+ +D F P+ GQR+G+ AGSG+GKSTLL Sbjct: 113 LGVVQTQCVFLASHINPLTRAAIDEPLTTRIKALDSFIPIGKGQRVGILAGSGVGKSTLL 172 Query: 179 SMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMA 234 +M + S C + ++I LVGERGREV EF+ + L+ ++V+V AT++E P+ R +A Sbjct: 173 AMMSDS-CAQQNAVIVIVLVGERGREVEEFVNGKMFKRLRSRAVLVAATAEEMPVTRVLA 231 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 + +AE S++G V+ ++DS+TR A + REI GE P A+GY SVFS L R++ Sbjct: 232 VKYGLALAESLSAEGKEVIFVVDSLTRVAMAQREIGLAIGEPPTAKGYTPSVFSLLQRIV 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + + + +ITA+ SVLV+ D+ +DPI D++R++LDGHIVL+R+LAE+G +P +D L Sbjct: 292 ERCG-AFRHRASITALFSVLVETDDFDDPIVDTLRAVLDGHIVLDRALAEQGHFPAIDVL 350 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387 SVSRL + A + KL + L+ +++ + Sbjct: 351 RSVSRLTTNLFDAKKIKLSRAGRILLSEYKQKK 383 >gi|167840175|ref|ZP_02466859.1| ATP synthase SpaL [Burkholderia thailandensis MSMB43] Length = 310 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 123/297 (41%), Positives = 178/297 (59%), Gaps = 3/297 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQRIG+FA +G GK++L++M D ++ Sbjct: 5 PDYAARRPIERRLATGVRAIDGLLTCGVGQRIGIFAAAGCGKTSLMNMMIEHAAADVYVV 64 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 65 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 124 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P E G+ITA Sbjct: 125 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTEAGSITAFY 182 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 183 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSTSRLFDEIAHAPHRA 242 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + R +E + +G YR G + D A+ + P + FL+Q+ + S+ D Sbjct: 243 AAMQFRRHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAIDEASAFD 299 >gi|300896251|ref|ZP_07114798.1| ATP synthase SpaL [Escherichia coli MS 198-1] gi|300359872|gb|EFJ75742.1| ATP synthase SpaL [Escherichia coli MS 198-1] Length = 435 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%) Query: 92 RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147 + I S + G V+NA G+ ++ D +G+L ++ ++PP+ +RV +T Sbjct: 87 QLTIQISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 144 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 IRVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 145 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 204 Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++ Sbjct: 205 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 264 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 R++ +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D Sbjct: 265 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 322 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 +RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ Sbjct: 323 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 382 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + +G YR G + D A++ P + ++LKQS Sbjct: 383 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 416 >gi|218706366|ref|YP_002413885.1| ATP synthase SpaL [Escherichia coli UMN026] gi|218433463|emb|CAR14365.1| ATP synthase spaL (Invasion protein invC) [Escherichia coli UMN026] Length = 439 Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%) Query: 92 RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147 + I S + G V+NA G+ ++ D +G+L ++ ++PP+ +RV +T Sbjct: 91 QLTIQISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 148 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 IRVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 149 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 208 Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++ Sbjct: 209 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 268 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 R++ +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D Sbjct: 269 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 326 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 +RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ Sbjct: 327 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 386 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + +G YR G + D A++ P + ++LKQS Sbjct: 387 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 420 >gi|271500425|ref|YP_003333450.1| type III secretion apparatus H+-transporting two-sector ATPase [Dickeya dadantii Ech586] gi|270343980|gb|ACZ76745.1| type III secretion apparatus H+-transporting two-sector ATPase [Dickeya dadantii Ech586] Length = 460 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 146/397 (36%), Positives = 228/397 (57%), Gaps = 12/397 (3%) Query: 45 LGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD ++ + +S L +++ + ++ +G + I+ G +V + + S Sbjct: 54 IGDLCLIERHDHSPVLAEIVGFSPKNTFLSALGALDGIAQGAVVTPLYQPHCVQVSEALF 113 Query: 103 GRVINALGKPID-GDDS--LGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 G V++ G+P++ G S + G LS M ++ PP R R+ TG+R ID Sbjct: 114 GSVLDGFGRPLEHGSHSAFVEPGSLSASPPMPVIGDAPPPTERPRIASPLPTGLRAIDGL 173 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK 215 + GQR+G+FAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L L+ Sbjct: 174 LTIGCGQRVGIFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDAQLR 233 Query: 216 -KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 ++V+V +TSD S + R A TA IAE F + G VLLI+DS+TRFA + REI G Sbjct: 234 SRTVLVCSTSDRSSMERARAAFTATAIAEAFRATGKQVLLIIDSLTRFARAQREIGLALG 293 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E G P SV++ LPRL+ER G + +G ITA+ SVL++ D+ NDP+AD VRS++DG Sbjct: 294 EPQGRGGLPPSVYTLLPRLVERAG--QTRQGAITALYSVLIEQDSMNDPVADEVRSLIDG 351 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HIVL+R LAE YP +D L S+SR + + +++ L+ +++ + +G Sbjct: 352 HIVLSRRLAERNHYPAIDVLMSLSRTMSNVVDTEHTRNANAVRRLMAAYKQVEMLIRLGE 411 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431 Y+PG D + D AV+ I FL+Q+ + S D Q Sbjct: 412 YQPGHDALTDAAVNANDDINRFLQQAMREPQSFDDIQ 448 >gi|301027452|ref|ZP_07190789.1| ATP synthase SpaL [Escherichia coli MS 69-1] gi|300394960|gb|EFJ78498.1| ATP synthase SpaL [Escherichia coli MS 69-1] Length = 435 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%) Query: 92 RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147 + I S + G V+NA G+ ++ D +G+L ++ ++PP+ +RV +T Sbjct: 87 QLTIQISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 144 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 IRVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 145 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 204 Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++ Sbjct: 205 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 264 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 R++ +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D Sbjct: 265 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 322 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 +RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ Sbjct: 323 EIRSILDGHIYLSRKLAGQGHYPTIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 382 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + +G YR G + D A++ P + ++LKQS Sbjct: 383 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 416 >gi|167577435|ref|ZP_02370309.1| ATP synthase SpaL [Burkholderia thailandensis TXDOH] Length = 310 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 122/295 (41%), Positives = 175/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 5 PDYAARRPIERRLATGVRAIDGLLTCGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 64 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 65 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGRD 124 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 125 VMLFLDSMTRYARALRDLALAAGEAPARRGYPASVFEQLPRLLER--PGRTHAGSITAFY 182 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 183 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLNSASRLFDEIADAPHRS 242 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FLKQ + S+ Sbjct: 243 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLKQEIDEASA 297 >gi|331664430|ref|ZP_08365336.1| invasion protein InvC [Escherichia coli TA143] gi|331058361|gb|EGI30342.1| invasion protein InvC [Escherichia coli TA143] Length = 430 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 197/332 (59%), Gaps = 5/332 (1%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGI 149 + I S + G V+NA G+ ++ GD ++ ++ ++PP+ +RV +T I Sbjct: 82 QLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNLRLIDELPPSYQERRVINTPLETRI 141 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 RVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 142 RVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESL 201 Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++R+ Sbjct: 202 KKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRD 261 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 + +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D + Sbjct: 262 MKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEI 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ + Sbjct: 320 RSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDLQV 379 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +G YR G + D A++ P + ++LKQS Sbjct: 380 FIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 411 >gi|293416112|ref|ZP_06658752.1| ATP synthase in type III secretion protein SctN [Escherichia coli B185] gi|291432301|gb|EFF05283.1| ATP synthase in type III secretion protein SctN [Escherichia coli B185] Length = 430 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 197/332 (59%), Gaps = 5/332 (1%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGI 149 + I S + G V+NA G+ ++ GD ++ ++ ++PP+ +RV +T I Sbjct: 82 QLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNLRLIDELPPSYQERRVINTPLETRI 141 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 RVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 142 RVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESL 201 Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++R+ Sbjct: 202 KQSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRD 261 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 + +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D + Sbjct: 262 MKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEI 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ + Sbjct: 320 RSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDLQV 379 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +G YR G + D A++ P + ++LKQS Sbjct: 380 FIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 411 >gi|307131226|ref|YP_003883242.1| type III secretory pathway, ATPase HrcN [Dickeya dadantii 3937] gi|306528755|gb|ADM98685.1| type III secretory pathway, ATPase component HrcN [Dickeya dadantii 3937] Length = 460 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 148/403 (36%), Positives = 230/403 (57%), Gaps = 14/403 (3%) Query: 45 LGDF-VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFH-WGRFRISPSACWC 102 +GD +V + +S L +++ + + ++ +G + I+ G +V + + S Sbjct: 55 IGDLCLVARDDSSQVLAEIVGFSPENTFLSALGALDGIAQGAVVTPLYQPHCVQVSDALF 114 Query: 103 GRVINALGKPI-DGDDS--LGKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 G V++ G+P+ DG S + G L+ + ++ PP R R+ TG+R ID Sbjct: 115 GSVLDGFGRPLEDGGHSAFVEPGSLNATPIPVIGDAPPPTERPRIADPLPTGMRAIDGLL 174 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215 + GQR+GVFAG+G GK+TLL+ AR+ D ++ L+GERGRE+REF++ L + L+ Sbjct: 175 TIGCGQRVGVFAGAGCGKTTLLAELARNTPCDAIVFGLIGERGRELREFLDHELDEQLRS 234 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 ++V+V +TSD S + R A TA IAE F + G VLLI+DS+TRFA + REI GE Sbjct: 235 RTVLVCSTSDRSSMERARAAFTATAIAEAFRAAGKQVLLIIDSLTRFARAQREIGLALGE 294 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 G P SV++ LPRL+ER G + +G ITA+ SVL++ D+ NDP+AD VRS++DGH Sbjct: 295 PQGRGGLPPSVYTLLPRLVERAG--QTRQGAITALYSVLIEQDSMNDPVADEVRSLIDGH 352 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 IVL+R LAE YP +D L S+SR D + +++ L+ +++ + +G Y Sbjct: 353 IVLSRRLAERNHYPAIDVLMSLSRTMSNVVERDHTRHANAVRRLMAAYKQVEMLIRLGEY 412 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 +PG D D AV I FL+Q+ + F I +L+ Sbjct: 413 QPGHDAFTDAAVSANDDINRFLQQA---MREPQGFDHIQSQLE 452 >gi|293406357|ref|ZP_06650283.1| ATP synthase SpaL [Escherichia coli FVEC1412] gi|298382093|ref|ZP_06991690.1| ATP synthase SpaL [Escherichia coli FVEC1302] gi|291426363|gb|EFE99395.1| ATP synthase SpaL [Escherichia coli FVEC1412] gi|298277233|gb|EFI18749.1| ATP synthase SpaL [Escherichia coli FVEC1302] Length = 430 Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 198/334 (59%), Gaps = 9/334 (2%) Query: 92 RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147 + I S + G V+NA G+ ++ D +G+L ++ ++PP+ +RV +T Sbjct: 82 QLTIQISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 139 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 IRVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 140 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 199 Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++ Sbjct: 200 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 259 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 R++ +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D Sbjct: 260 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 317 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 +RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ Sbjct: 318 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 377 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + +G YR G + D A++ P + ++LKQS Sbjct: 378 QVFIDLGEYRAGQNAENDFAMNARPKLTNWLKQS 411 >gi|167743206|ref|ZP_02415980.1| ATP synthase SpaL [Burkholderia pseudomallei 14] Length = 306 Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 1 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 60 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 61 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 120 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 121 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 178 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 179 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 238 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 239 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 293 >gi|197286521|ref|YP_002152393.1| ATP synthase SpaL [Proteus mirabilis HI4320] gi|227357595|ref|ZP_03841948.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906] gi|194684008|emb|CAR45299.1| type III secretion system protein [Proteus mirabilis HI4320] gi|227162305|gb|EEI47309.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906] Length = 432 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 119/290 (41%), Positives = 180/290 (62%), Gaps = 4/290 (1%) Query: 133 PPAM-NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP +R + FK+GIR ID GQR+G+FA +G GK+ L++M R D + Sbjct: 126 PPLFSDRLPITTLFKSGIRAIDGLLSCGLGQRMGIFASAGTGKTMLMNMIIRFAQADVFV 185 Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I L+GERGREV EFIE+ + +V++ +TS++S + R A L A T+AEYF +G Sbjct: 186 IGLIGERGREVTEFIEELKQHKRCENTVLICSTSEQSAVERCNAALVATTVAEYFRQQGK 245 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 NV+L +DS+TR+ ++R+IA +GELPV +GYP SVF +LP +LER P + G+ITA Sbjct: 246 NVVLFIDSMTRYCRALRDIALTAGELPVRKGYPASVFDKLPAILER--PGVTKTGSITAF 303 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VL++ D+ D I + +RSILDGHI L+R +A G YP +D L SVSR+ + + ++ Sbjct: 304 YTVLLESDDEPDAIGEEIRSILDGHIYLSRKIAASGHYPAIDVLGSVSRVFQQVTDSKQQ 363 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 K + ++ R ++ + ++ +G Y G + + D AV + I FL QS Sbjct: 364 KSALKIRQILMRLQDVKLLQELGEYHEGDNELNDIAVRKQAKIESFLTQS 413 >gi|254301453|ref|ZP_04968897.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 406e] gi|157811378|gb|EDO88548.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 406e] Length = 381 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 76 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 135 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 136 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 195 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 196 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 253 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 254 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 313 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 314 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 368 >gi|83717980|ref|YP_439029.1| ATP synthase SpaL [Burkholderia thailandensis E264] gi|167615585|ref|ZP_02384220.1| ATP synthase SpaL [Burkholderia thailandensis Bt4] gi|257142137|ref|ZP_05590399.1| ATP synthase SpaL [Burkholderia thailandensis E264] gi|83651805|gb|ABC35869.1| type III secretion system protein BsaS [Burkholderia thailandensis E264] Length = 436 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 132/346 (38%), Positives = 192/346 (55%), Gaps = 7/346 (2%) Query: 86 LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGK----GDLSMEIMSKVPPAMNRQRV 141 LV R I S G V++A G ++ + G I + P R+ + Sbjct: 80 LVPTGERMTIDVSPALLGAVVDAAGGVVETLGTAGALRGAAPRRSAIDAAPPDYAARRPI 139 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 E+ TG+R ID GQR G+FA +G GK++L++M D +++L+GERGRE Sbjct: 140 ERRLATGVRAIDGLLTCGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGERGRE 199 Query: 202 VREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 V EF+E + ++VVV ATSD + + R A L A TIAEYF G +V+L LDS+T Sbjct: 200 VSEFVERMRRSGSRDRTVVVYATSDRASVDRCNAALVATTIAEYFRDLGCDVMLFLDSMT 259 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA +VL++ + Sbjct: 260 RYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTHAGSITAFYTVLLENEEE 317 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + L + Sbjct: 318 PDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLKSASRLFDEIADAPHRSLAKRFRQHL 377 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 R +E + +G YR G + D A+ + P + FLKQ + S+ Sbjct: 378 ARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLKQEIDEASA 423 >gi|167898814|ref|ZP_02486215.1| ATP synthase SpaL [Burkholderia pseudomallei 7894] gi|167908518|ref|ZP_02495723.1| ATP synthase SpaL [Burkholderia pseudomallei NCTC 13177] Length = 307 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 2 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 61 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 62 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 121 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 122 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 179 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 180 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 239 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 240 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 294 >gi|293412216|ref|ZP_06654939.1| conserved hypothetical protein [Escherichia coli B354] gi|291468987|gb|EFF11478.1| conserved hypothetical protein [Escherichia coli B354] Length = 430 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 197/332 (59%), Gaps = 5/332 (1%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGI 149 + I S + G V+NA G+ ++ GD ++ ++ ++PP+ +RV +T I Sbjct: 82 QLTIQISDAFLGSVLNASGQIMERFVPDTPGDRGNLRLIDELPPSYQERRVINTPLETRI 141 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 RVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 142 RVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESL 201 Query: 210 LGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++R+ Sbjct: 202 KKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRD 261 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 + +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D + Sbjct: 262 MKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGDEI 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRD 388 RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ + Sbjct: 320 RSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDLQV 379 Query: 389 IRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +G YR G + D A++ P + ++LKQS Sbjct: 380 FIDLGEYRAGQNSENDFAMNARPKLTNWLKQS 411 >gi|226195959|ref|ZP_03791545.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei Pakistan 9] gi|225931852|gb|EEH27853.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei Pakistan 9] Length = 436 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 177/295 (60%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 131 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 190 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 191 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 250 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P + G+ITA Sbjct: 251 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTKAGSITAFY 308 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 309 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 368 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 369 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 423 >gi|254575128|gb|ACT68029.1| type III secretion protein [Pantoea stewartii subsp. stewartii DC283] Length = 431 Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 136/378 (35%), Positives = 204/378 (53%), Gaps = 22/378 (5%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK------ 111 QVI N + + + + S +++ G+ FRI G +I+A G Sbjct: 47 FAQVIGFNKEHTLLSLLNDNQGFSRSNVLLPTGKPFRIEVHENIAGAIIDATGTIRGRLD 106 Query: 112 -----PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 P+ G SL + + P + TG+R ID GQR+G+ Sbjct: 107 EAVQPPLTGGVSLDASGAPRDFTQRTP-------IADALATGVRTIDGLLTCGQGQRMGI 159 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV-ATSD 225 FA +G GK++L+SM D +I L+GERGREV EF+E+ + + +++V ATSD Sbjct: 160 FAAAGCGKTSLMSMIIEHSEADIYVIGLIGERGREVTEFVEELKHSSRRLQIILVYATSD 219 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 S + R A A TIAE+FS +G NVLL +DSITR+A ++R++A + GELP RGYP S Sbjct: 220 RSCVERCNAAQIATTIAEFFSEQGKNVLLFMDSITRYARALRDVALSMGELPARRGYPAS 279 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VF LP+LLER P +G+ITA +VL++ + +D I D VRSILDGHI L++ LA + Sbjct: 280 VFEALPKLLER--PGRFLRGSITAFYTVLIENEEESDVIGDEVRSILDGHIYLSKKLAAK 337 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 G YP +D + S+SR+ + S D + L + + R ++ + +G YR G + D Sbjct: 338 GHYPAIDVMQSISRVFTQVTSEDHQVLATRFRKFLVRQKDMQLYLDLGEYRRGENTDNDA 397 Query: 406 AVHQVPIIYDFLKQSPSD 423 A + + FL+Q S+ Sbjct: 398 AFDRKDQMEAFLQQRMSE 415 >gi|268592379|ref|ZP_06126600.1| invasion protein InvC [Providencia rettgeri DSM 1131] gi|291312165|gb|EFE52618.1| invasion protein InvC [Providencia rettgeri DSM 1131] Length = 430 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 133/334 (39%), Positives = 196/334 (58%), Gaps = 8/334 (2%) Query: 101 WCGRVINALGKPIDG--DDSLGKGDLSMEIMS-KVPPAMNRQR--VEKGFKTGIRVIDIF 155 G++ NA G+ + +D L+ +++ PP QR V + TG+R ID Sbjct: 88 LAGKIFNAAGEQVGALSEDLTEPMLLNTKLLRIDSPPVSVTQRRPVSEPMVTGVRAIDSL 147 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNL 214 GQRIG+FA +G GK++L++M D +++L+GERGREV EFIE+ + Sbjct: 148 LTCGLGQRIGIFAAAGSGKTSLMNMIINHAHADIHVVALIGERGREVIEFIEELKESPHA 207 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +++++ ATSD PI R A L A TIAEYF G NVLL +DS+TR+A ++R++A +G Sbjct: 208 AQTILIYATSDSPPIERCNAALLATTIAEYFRDCGRNVLLYVDSMTRYARALRDVALATG 267 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ELP RGYP SVF +LP LLER P + + G+ITA +VL++ + DPI D +RSILDG Sbjct: 268 ELPARRGYPASVFEQLPMLLER--PGQLKHGSITAFYTVLLESEEEADPIGDEIRSILDG 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HI L+ LA G YP +D L S+SR+ K + + ++ L +I R E+ + +G Sbjct: 326 HIYLSHKLAGRGHYPAIDILHSISRVFQKVTTPEHRRCAIDLRDMISRLEQIQLYLELGE 385 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 Y+ G D+A+ + I FLKQ+ + S D Sbjct: 386 YQRGESHENDRALDKKEQIEAFLKQAMDEPMSFD 419 >gi|225863608|ref|YP_002748986.1| putative flagellum-specific ATP synthase [Bacillus cereus 03BB102] gi|225786032|gb|ACO26249.1| putative flagellum-specific ATP synthase [Bacillus cereus 03BB102] Length = 434 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 145/370 (39%), Positives = 217/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P G E++ GD V + P G+V++A G+ ++ D Sbjct: 56 LCEVIAIEKENNMLLPFGQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S++ +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|167828752|ref|ZP_02460223.1| ATP synthase SpaL [Burkholderia pseudomallei 9] Length = 302 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 120/290 (41%), Positives = 176/290 (60%), Gaps = 3/290 (1%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ +E+ TG+R ID GQR G+FA +G GK++L++M D +++L+GE Sbjct: 2 RRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGE 61 Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G +V+L L Sbjct: 62 RGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCDVMLFL 121 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P + G+ITA +VL++ Sbjct: 122 DSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTKAGSITAFYTVLLE 179 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + L Sbjct: 180 NEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRALAKRF 239 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 240 RQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 289 >gi|167923342|ref|ZP_02510433.1| ATP synthase SpaL [Burkholderia pseudomallei BCC215] Length = 319 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 14 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 73 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 74 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 133 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 134 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 191 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 192 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 251 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 252 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 306 >gi|229132562|ref|ZP_04261411.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST196] gi|228650908|gb|EEL06894.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST196] Length = 429 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 148/380 (38%), Positives = 222/380 (58%), Gaps = 14/380 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P G E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFGQTEKVCYGDAVTLIEEDVVVPRGNHLLGKVLSANGEVLNENT 110 Query: 118 SLGKGDLSME-IMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 ++ ++ I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GK Sbjct: 111 E----NIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 166 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233 STLL M A++ D +ISLVGERGREV++FI LG+ +KKSVVVVATSDES +++ Sbjct: 167 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLR 226 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +L Sbjct: 227 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 285 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + Sbjct: 286 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 343 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412 L SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V Sbjct: 344 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEA 403 Query: 413 IYDFLKQSPSD-LSSEDVFQ 431 I FLKQ +D EDV Q Sbjct: 404 INTFLKQGRTDSFQFEDVVQ 423 >gi|53716453|ref|YP_106129.1| ATP synthase SpaL [Burkholderia mallei ATCC 23344] gi|67639408|ref|ZP_00438268.1| type III secretion system protein BsaS [Burkholderia mallei GB8 horse 4] gi|124381359|ref|YP_001025860.1| ATP synthase SpaL [Burkholderia mallei NCTC 10229] gi|126447058|ref|YP_001077945.1| ATP synthase SpaL [Burkholderia mallei NCTC 10247] gi|167004379|ref|ZP_02270137.1| type III secretion system protein BsaS [Burkholderia mallei PRL-20] gi|254176334|ref|ZP_04882992.1| type III secretion system protein BsaS [Burkholderia mallei ATCC 10399] gi|254200996|ref|ZP_04907361.1| type III secretion system protein BsaS [Burkholderia mallei FMH] gi|254204959|ref|ZP_04911312.1| type III secretion system protein BsaS [Burkholderia mallei JHU] gi|254359078|ref|ZP_04975350.1| type III secretion system protein BsaS [Burkholderia mallei 2002721280] gi|52422423|gb|AAU45993.1| type III secretion system protein BsaS [Burkholderia mallei ATCC 23344] gi|126239912|gb|ABO03024.1| type III secretion system protein BsaS [Burkholderia mallei NCTC 10247] gi|147748608|gb|EDK55683.1| type III secretion system protein BsaS [Burkholderia mallei FMH] gi|147754545|gb|EDK61609.1| type III secretion system protein BsaS [Burkholderia mallei JHU] gi|148028265|gb|EDK86225.1| type III secretion system protein BsaS [Burkholderia mallei 2002721280] gi|160697376|gb|EDP87346.1| type III secretion system protein BsaS [Burkholderia mallei ATCC 10399] gi|238519945|gb|EEP83410.1| type III secretion system protein BsaS [Burkholderia mallei GB8 horse 4] gi|243060295|gb|EES42481.1| type III secretion system protein BsaS [Burkholderia mallei PRL-20] gi|261826278|gb|ABM99622.2| type III secretion system protein BsaS [Burkholderia mallei NCTC 10229] Length = 436 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 131 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 190 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 191 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 250 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 251 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 308 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 309 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 368 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 369 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 423 >gi|53722562|ref|YP_111547.1| ATP synthase SpaL [Burkholderia pseudomallei K96243] gi|76818421|ref|YP_335741.1| ATP synthase SpaL [Burkholderia pseudomallei 1710b] gi|126444845|ref|YP_001063165.1| ATP synthase SpaL [Burkholderia pseudomallei 668] gi|134282099|ref|ZP_01768805.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 305] gi|237507445|ref|ZP_04520160.1| flagellum-specific ATP synthase [Burkholderia pseudomallei MSHR346] gi|254185164|ref|ZP_04891753.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 1655] gi|254265077|ref|ZP_04955942.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 1710a] gi|52212976|emb|CAH39014.1| surface presentation of antigens protein [Burkholderia pseudomallei K96243] gi|76582894|gb|ABA52368.1| surface presentation of antigens protein [Burkholderia pseudomallei 1710b] gi|126224336|gb|ABN87841.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 668] gi|134246628|gb|EBA46716.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 305] gi|184215756|gb|EDU12737.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 1655] gi|234999650|gb|EEP49074.1| flagellum-specific ATP synthase [Burkholderia pseudomallei MSHR346] gi|254216079|gb|EET05464.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 1710a] Length = 435 Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 130 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 189 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 190 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 249 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 250 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 307 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 308 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 367 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 368 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 422 >gi|229166590|ref|ZP_04294342.1| Flagellum-specific ATP synthase [Bacillus cereus AH621] gi|228616844|gb|EEK73917.1| Flagellum-specific ATP synthase [Bacillus cereus AH621] Length = 429 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 148/380 (38%), Positives = 222/380 (58%), Gaps = 14/380 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P G E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFGQTEKVCYGDAVTLIEEDVVVPRGNHLLGKVLSANGEVLNENT 110 Query: 118 SLGKGDLSME-IMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 ++ ++ I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GK Sbjct: 111 E----NIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 166 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233 STLL M A++ D +ISLVGERGREV++FI LG+ +KKSVVVVATSDES +++ Sbjct: 167 STLLGMVAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLR 226 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +L Sbjct: 227 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 285 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + Sbjct: 286 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 343 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412 L SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V Sbjct: 344 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEA 403 Query: 413 IYDFLKQSPSD-LSSEDVFQ 431 I FLKQ +D EDV Q Sbjct: 404 INTFLKQGRTDSFQFEDVVQ 423 >gi|167820382|ref|ZP_02452062.1| ATP synthase SpaL [Burkholderia pseudomallei 91] Length = 301 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 120/290 (41%), Positives = 175/290 (60%), Gaps = 3/290 (1%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ +E+ TG+R ID GQR G+FA +G GK++L++M D +++L+GE Sbjct: 1 RRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGE 60 Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G +V+L L Sbjct: 61 RGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCDVMLFL 120 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA +VL++ Sbjct: 121 DSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFYTVLLE 178 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + L Sbjct: 179 NEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRALAKRF 238 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 239 RQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 288 >gi|167915496|ref|ZP_02502587.1| ATP synthase SpaL [Burkholderia pseudomallei 112] Length = 311 Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 6 PDYAARRPIERRLATGVRAIDGLLVCGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 65 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 66 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 125 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 126 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFY 183 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 184 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 243 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 244 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 298 >gi|167850208|ref|ZP_02475716.1| ATP synthase SpaL [Burkholderia pseudomallei B7210] Length = 311 Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 6 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 65 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 66 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 125 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 126 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRVGSITAFY 183 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 184 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 243 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 244 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 298 >gi|167573312|ref|ZP_02366186.1| ATP synthase SpaL [Burkholderia oklahomensis C6786] Length = 436 Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 8/375 (2%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID--GD 116 QV+ D + +G +S ++ G R I S G V++A G ++ G Sbjct: 53 AQVVGFARDTAILSTLGSTAGLSRQVVLVPTGERMTIDVSPAMLGAVVDATGGIVETFGA 112 Query: 117 DSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + S M I + P R+ +++ TG+R ID GQR G+FA +G GK Sbjct: 113 SQPARDAASRRMAIDAAPPDYAARRSIDRRLATGVRAIDGLLTCGVGQRFGIFAAAGCGK 172 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKM 233 ++L++M D +++L+GERGREV EF+E + +++VV ATSD S + R Sbjct: 173 TSLMNMMIEHAAADVYVVALIGERGREVSEFVERLRRSGSRDRTIVVYATSDRSSVDRCN 232 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A L A TIAEYF G +V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRL Sbjct: 233 AALVATTIAEYFRDLGCDVMLFLDSMTRYARALRDLALTTGEAPARRGYPASVFEQLPRL 292 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER P + G+ITA +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D Sbjct: 293 LER--PGRTDAGSITAFYTVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDV 350 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 L S SRL D+ A + L + R +E + +G YR G + D A+ + + Sbjct: 351 LRSASRLFDEIAGAPHRALARRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRSAL 410 Query: 414 YDFLKQSPSDLSSED 428 FL+Q + S+ D Sbjct: 411 DAFLQQEVDEASAFD 425 >gi|75906102|gb|ABA29443.1| putative type III secretion system ATP synthase [Candidatus Hamiltonella defensa] Length = 361 Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 124/306 (40%), Positives = 184/306 (60%), Gaps = 4/306 (1%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I S P ++R + F TG++ ID GQR+G+FA +G GK++L+ M Sbjct: 55 IDSPPPSYLHRLSIRDPFITGVKAIDGLITCGVGQRMGIFAAAGCGKTSLMHMLIEQADA 114 Query: 188 DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I LVGERGREV EF E +K +VV ATSD S + R A L A TIAEYF Sbjct: 115 DVFVIGLVGERGREVTEFTEVLSKSGRAQKCIVVYATSDFSSLDRCNAALLATTIAEYFR 174 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G V+L LDSITR+A ++R++A +GE P RGYP SVF LP +LER PS + G+ Sbjct: 175 DQGKKVVLFLDSITRYARALRDVALAAGEAPARRGYPASVFDSLPSILER--PSNTKNGS 232 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA ++L++ D+ DPI++ +RSILDGHI L++ LA + YP +D L S+SR++ + Sbjct: 233 ITAFYTILLESDDEPDPISEEIRSILDGHIYLSKKLAIKNHYPAIDVLHSISRVSSQICD 292 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + + +++ + +E + +G YR G + D+A+ + P + +L+QS ++ SS Sbjct: 293 TNHLSMAGEFRNILAKIQELQMFVELGEYRQGENAENDRAIKKRPALLKWLQQSMNEHSS 352 Query: 427 -EDVFQ 431 E FQ Sbjct: 353 FEQTFQ 358 >gi|315301972|ref|ZP_07872966.1| flagellar protein export ATPase FliI [Listeria ivanovii FSL F6-596] gi|313629659|gb|EFR97798.1| flagellar protein export ATPase FliI [Listeria ivanovii FSL F6-596] Length = 433 Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 159/428 (37%), Positives = 235/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQMYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ I G+V+NA G+ ++ + K M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTNITIPADEFLLGKVLNASGEILNEEAGTAKYKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A NR + + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D I Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + E+G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--EQGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L+SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRDLATKNHYPAIDVLSSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K+ S + I + E +G D + + + I+ FLKQ L E V Sbjct: 365 KMASKIREWISIYLENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T +L Sbjct: 421 TLEETNQL 428 >gi|186976186|gb|ACD01068.1| EivC [Escherichia coli O157:H7 str. EC10] Length = 430 Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 132/334 (39%), Positives = 197/334 (58%), Gaps = 9/334 (2%) Query: 92 RFRISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKT 147 + I S + G V+NA G+ ++ D +G+L ++ ++PP+ +RV +T Sbjct: 82 QLTIQISDAFLGSVLNASGQIMERFVPDTPGERGNL--RLIDELPPSYQERRVINTPLET 139 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 IRVID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 140 RIRVIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAE 199 Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++ Sbjct: 200 SLKKSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARAL 259 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 R++ +GE P RGYP SVF LPRLLER GP+ KG+ITA +VL++G++ +DP+ D Sbjct: 260 RDMKLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITAFYTVLLEGEDESDPLGD 317 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 +RSILDGHI L+R LA +G YP +D L SVSR+ + + + + ++ E+ Sbjct: 318 EIRSILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKILTTLEDL 377 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + +G YR G + D ++ P + ++LKQS Sbjct: 378 QVFIDLGEYRAGQNAENDFVMNARPKLTNWLKQS 411 >gi|126457578|ref|YP_001076116.1| ATP synthase SpaL [Burkholderia pseudomallei 1106a] gi|242312080|ref|ZP_04811097.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 1106b] gi|254193811|ref|ZP_04900243.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei S13] gi|126231346|gb|ABN94759.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 1106a] gi|169650562|gb|EDS83255.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei S13] gi|242135319|gb|EES21722.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 1106b] Length = 435 Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 121/295 (41%), Positives = 176/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 130 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 189 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 190 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 249 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 250 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRVGSITAFY 307 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + Sbjct: 308 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRA 367 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 368 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 422 >gi|167566202|ref|ZP_02359118.1| ATP synthase SpaL [Burkholderia oklahomensis EO147] Length = 436 Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 136/375 (36%), Positives = 205/375 (54%), Gaps = 8/375 (2%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID--GD 116 QV+ D + +G +S ++ G R I S G V++A G ++ G Sbjct: 53 AQVVGFARDTAILSTLGSTAGLSRQVVLVPTGERMTIDVSPAMLGAVVDATGGIVETFGA 112 Query: 117 DSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + S M I + P R+ +++ TG+R ID GQR G+FA +G GK Sbjct: 113 SQPARDAASRRMAIDAAPPDYAARRSIDRRLATGVRAIDGLLTCGVGQRFGIFAAAGCGK 172 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKM 233 ++L++M D +++L+GERGREV EF+E + +++VV ATSD S + R Sbjct: 173 TSLMNMMIEHAAADVYVVALIGERGREVSEFVERLRRSGSRDRTIVVYATSDRSSVDRCN 232 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A L A TIAEYF G +V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRL Sbjct: 233 AALVATTIAEYFRDLGCDVMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRL 292 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER P + G+ITA +VL++ + DPI D +RSI+DGH+ L+R L +G +P +D Sbjct: 293 LER--PGRTDAGSITAFYTVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKGHFPAIDV 350 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPII 413 L S SRL D+ A + L + R +E + +G YR G + D A+ + + Sbjct: 351 LRSASRLFDEIAGAPHRALARRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRSAL 410 Query: 414 YDFLKQSPSDLSSED 428 FL+Q + S+ D Sbjct: 411 DAFLQQEVDEASAFD 425 >gi|261344595|ref|ZP_05972239.1| invasion protein InvC [Providencia rustigianii DSM 4541] gi|282567509|gb|EFB73044.1| invasion protein InvC [Providencia rustigianii DSM 4541] Length = 430 Score = 222 bits (565), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 129/333 (38%), Positives = 199/333 (59%), Gaps = 8/333 (2%) Query: 102 CGRVINALGKPI----DGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFT 156 GR+ NA G+ + D + + + ++ + P ++ ++R V + TGIR ID Sbjct: 89 AGRIFNAAGEQVGSLVDENIEISQLKNRLQRIDNPPISVTKRRPVSEPLVTGIRAIDGLL 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLK 215 GQR+G+FA +G GK++L++M D I++L+GERGREV EFIE+ + Sbjct: 149 TCGLGQRLGIFASAGSGKTSLMNMLINHAHGDIHIVALIGERGREVIEFIEELKTSPHAD 208 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K+++V ATSD PI R A L A +AEYF G +VLL +DS+TR+A ++R++A ++GE Sbjct: 209 KTILVYATSDSPPIERCNAALLATAMAEYFRDLGRHVLLYVDSMTRYARALRDVALSTGE 268 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 LP RGYP+SVF +LP LLER P ++G ITA +VL++ ++ +DPI D +RSILDGH Sbjct: 269 LPARRGYPSSVFEQLPLLLER--PGRIKEGAITAFYTVLLESEDESDPIGDEIRSILDGH 326 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 I L+ LA G YP +D L S+SR+ K + + ++ + + R E+ + +G Y Sbjct: 327 IYLSHKLAGRGHYPAIDILHSISRVFQKVTTPEHRQWAVDVRDNLARLEQIQLYLELGEY 386 Query: 396 RPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + G D+A+ + P I FL+Q D S + Sbjct: 387 QRGESAENDRALDKQPEITRFLQQPMDDFVSAE 419 >gi|507390|gb|AAA81942.1| HrpJ4 [Pseudomonas syringae] gi|148562535|gb|ABQ88354.1| HrcN [Pseudomonas syringae pv. syringae] Length = 449 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 159/431 (36%), Positives = 232/431 (53%), Gaps = 33/431 (7%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + + C +GD V + S L +++ + + +G + I Sbjct: 26 GRVSAVRRIL--LECRIPSAKVGDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQ 83 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDG-------------DDSLGKGDLSMEI 128 +G + G RI G V++ G+P+ G DS G Sbjct: 84 VGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGRLPRRVRRPRRPPHDSAGD------- 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P A G TGIR ID L GQR+G+FAG+G GK+TL++ AR+ D Sbjct: 137 -RRRPAADPATAHHPGLATGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCD 195 Query: 189 KVIISLVGERGREVREFIEDYLGDNLKK-SVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 ++ L+GERGRE+REF++ L + L++ SV+V ATSD S + R A TA IAE F + Sbjct: 196 VIVFGLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRA 255 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKGN 306 +G VLL+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G+ Sbjct: 256 RGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--GS 312 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ Sbjct: 313 ITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTG 372 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 ++ + L L+ +++ + +G Y+ G D + D AV I FL+Q DL Sbjct: 373 RKHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLRE 429 Query: 427 EDVFQEITKKL 437 QE +L Sbjct: 430 PVPLQETLDRL 440 >gi|238898592|ref|YP_002924273.1| type III ATP synthase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466351|gb|ACQ68125.1| type III ATP synthase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 431 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 124/313 (39%), Positives = 186/313 (59%), Gaps = 4/313 (1%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I S P ++R + F TG++ ID GQR+G+FA +G GK++L+ M Sbjct: 121 IDSPPPSYLHRLSIRDPFITGVKAIDGLITCGVGQRMGIFAAAGCGKTSLMHMLIEQADA 180 Query: 188 DKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +I LVGERGREV EF E +K +VV ATSD S + R A L A TIAEYF Sbjct: 181 DVFVIGLVGERGREVTEFTEVLSKSGRAQKCIVVYATSDFSSLDRCNAALLATTIAEYFR 240 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G V+L LDSITR+A ++R++A +GE P RGYP SVF LP +LER PS + G+ Sbjct: 241 DQGKKVVLFLDSITRYARALRDVALAAGEAPARRGYPASVFDSLPSILER--PSNTKNGS 298 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 ITA ++L++ D+ DPI++ +RSILDGHI L++ LA + YP +D L S+SR++ + Sbjct: 299 ITAFYTILLESDDEPDPISEEIRSILDGHIYLSKKLAIKNHYPAIDVLHSISRVSSQICD 358 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + + +++ + +E + +G YR G + D+A+ + P + +L+QS ++ SS Sbjct: 359 TNHLSMAGEFRNILAKIQELQMFVELGEYRQGENAENDRAIKKRPALLKWLQQSMNEHSS 418 Query: 427 -EDVFQEITKKLQ 438 E Q + + Q Sbjct: 419 FEQTLQAMNELTQ 431 >gi|16802758|ref|NP_464243.1| flagellum-specific ATP synthase [Listeria monocytogenes EGD-e] gi|224501979|ref|ZP_03670286.1| flagellum-specific ATP synthase [Listeria monocytogenes FSL R2-561] gi|255025684|ref|ZP_05297670.1| flagellum-specific ATP synthase [Listeria monocytogenes FSL J2-003] gi|255028429|ref|ZP_05300380.1| flagellum-specific ATP synthase [Listeria monocytogenes LO28] gi|16410105|emb|CAC98794.1| lmo0716 [Listeria monocytogenes EGD-e] Length = 433 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 234/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + + K M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGMAKFKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG D L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ ++ Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T KL Sbjct: 421 TLEETSKL 428 >gi|254830293|ref|ZP_05234948.1| flagellum-specific ATP synthase [Listeria monocytogenes 10403S] gi|24266813|gb|AAN52355.1| FliI [Listeria monocytogenes] Length = 433 Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 234/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + + K M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGMAKFKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG D L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ ++ Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T KL Sbjct: 421 TLEETSKL 428 >gi|163939555|ref|YP_001644439.1| flagellum-specific ATP synthase [Bacillus weihenstephanensis KBAB4] gi|163861752|gb|ABY42811.1| ATPase, FliI/YscN family [Bacillus weihenstephanensis KBAB4] Length = 434 Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 147/379 (38%), Positives = 220/379 (58%), Gaps = 12/379 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GDLV + P G+V++A GK ++ D Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDLVTLITEDVVVPRGNHLLGKVLSANGKVLNED- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ +KKSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R +A YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKREIATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S + ++ + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPNHWQVANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD-LSSEDVFQ 431 FLKQ +D ED+ Q Sbjct: 410 NTFLKQGRTDSFHFEDIVQ 428 >gi|313634350|gb|EFS00948.1| flagellar protein export ATPase FliI [Listeria seeligeri FSL N1-067] Length = 433 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 236/428 (55%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQMYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G+ ++ + G ++ + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGEILN--EEAGTAKFKQKMPLEAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A NR + + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D I Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + ELP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KLGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ ++ Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E+V Sbjct: 365 KNASKIREWMSIYQENELYFKLGTIEQTNDNASIFTSKEKSYFIHQFLKQ----LRDENV 420 Query: 430 FQEITKKL 437 E T +L Sbjct: 421 SLEETNQL 428 >gi|38619365|gb|AAR25633.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas sp. KD] Length = 405 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 149/399 (37%), Positives = 227/399 (56%), Gaps = 16/399 (4%) Query: 10 QLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLD 68 Q A S + V G +S+++ + + C +GD V + S L +++ Sbjct: 13 QRARLTSCSAVRISGKVSAVSGIL--LECQVPAAKIGDLCEVSKADGSSMLAEIVGFTDQ 70 Query: 69 IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDL--- 124 + +G I +G + G RI G V++ G+P+ GD D+ Sbjct: 71 CTLLSALGTPAGIQVGARIQPLGIAHRIGVDDQLLGSVLDGFGRPLLGDGLGAFADVHDC 130 Query: 125 --SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 + +++ P M + R+ TGIR ID L GQR+G+FAG+G GK+TLL+ A Sbjct: 131 RSTTAVIADALPPMQKPRISNPLPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLLAEMA 190 Query: 183 RS-DCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVT 240 R+ DC D ++ L+GERGRE+REF++ L D L+ +SV++ ATSD S + R A TA Sbjct: 191 RNMDC-DVIVFGLIGERGRELREFLDHELDDELRQRSVLICATSDRSSMERARAAFTATA 249 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGP 299 IAE + +G VLL++DS+TRFA + REI +GE P+ RG P SV++ LP+L+ER G Sbjct: 250 IAEAYRQRGMKVLLLIDSLTRFARAQREIGIAAGE-PIGRGGLPPSVYTLLPQLVERAGM 308 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 SE G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR Sbjct: 309 SEN--GSITAIYTVLIEADSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISR 366 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 + S + + + L L+ +++ + +G Y+ G Sbjct: 367 ILGNVTSREHVQANNRLRQLMAAYKQVEMLLRLGEYQXG 405 >gi|1146265|gb|AAB04681.1| flagellar export protein [Borrelia burgdorferi] Length = 436 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 134/342 (39%), Positives = 203/342 (59%), Gaps = 6/342 (1%) Query: 81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 I +G+ V+ + I+ S GRVI++LG+PID S I K+ P +NR Sbjct: 78 IEVGNKVYSLNKGLEINLSDELLGRVIDSLGRPIDNKGSFFNNSYKELIFQKINP-INRS 136 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISLVGER 198 E TG++V+D F P+ + VF G+G S L L M A++ D +I+ +GER Sbjct: 137 IFEDQILTGVKVLDGFLPVAKRTKELVFFWFGVGNSYLCLGMIAKNSNADVNVIAFIGER 196 Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257 GRE+ EFIE LG+ LKKSV+VV+TSDESPI R A IAEYF +G +VL D Sbjct: 197 GRELNEFIEHELGEERLKKSVLVVSTSDESPISRYKGAYVATMIAEYFREQGKDVLC-FD 255 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 SIT FA++ + + PVA+GYP SVF E+P LLER G + G++T +VLV+G Sbjct: 256 SITWFANAKKRDVSFFRGAPVAKGYPPSVFVEIPILLERSGFN-GNGGSVTGFYTVLVEG 314 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 D+ +P+ D+++++LDGHI+L+R L + G YP ++ L+S SR + S +++KL+ Sbjct: 315 DDFTEPVDDNIKAVLDGHIILDRDLFDRGIYPSINVLSSTSRSIHRIMSLEKQKLIMKAR 374 Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +L+ +++ D+ G Y G + +D A+ + P I +F+ Q Sbjct: 375 NLLSIYKDYEDLIRTGIYLKGSNKDVDFAISKYPKIINFISQ 416 >gi|238755996|ref|ZP_04617321.1| ATP synthase spaL [Yersinia ruckeri ATCC 29473] gi|238705785|gb|EEP98177.1| ATP synthase spaL [Yersinia ruckeri ATCC 29473] Length = 431 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 128/309 (41%), Positives = 184/309 (59%), Gaps = 9/309 (2%) Query: 133 PPAMN-RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF-ARSDCFDKV 190 PP M R + F TGIR +D GQR G+FA +G GK++L++M A SD D Sbjct: 125 PPEMTLRHPINSQFSTGIRAVDGLLTCGKGQRFGIFASAGAGKTSLMNMIIAHSDA-DVC 183 Query: 191 IISLVGERGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKG 249 I++LVGERGREV EFI + + S ++V ATSD I R A L A +AEYF G Sbjct: 184 IVALVGERGREVTEFIHELSSSPRRDSTILVYATSDSPSIERCNAALLATAMAEYFRDLG 243 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 NV+L +DS+TR+A ++R++A +GELP RGYP SVF LP LLER P + G+ITA Sbjct: 244 RNVVLFVDSMTRYARALRDVALAAGELPARRGYPASVFERLPSLLER--PGNMQNGSITA 301 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 +VL++ ++ DPI D +RSILDGHI L+ LA G YP +D L+S+SR+ + + Sbjct: 302 FYTVLLESEDEPDPIGDEIRSILDGHIYLSYKLAGRGHYPAIDILSSISRVFPQITTDSH 361 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 +K + + ++ R +E + +G Y+ G + D+A+ + I FL+QS ++ Sbjct: 362 RKSAAEMRDMLARLDEIQLYLDLGEYQRGENPANDRALDRKSEIEAFLRQS---MAMNSP 418 Query: 430 FQEITKKLQ 438 F+E K L Sbjct: 419 FEETQKALN 427 >gi|313639033|gb|EFS04024.1| flagellar protein export ATPase FliI [Listeria seeligeri FSL S4-171] Length = 433 Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 236/428 (55%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQMYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G+ ++ + G ++ + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGEILN--EEAGTAKFKQKMPLEAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A NR + + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D I Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + ELP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KLGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ ++ Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E+V Sbjct: 365 KNASKVREWMSIYQENELYFKLGTIEQTNDNASIFTSKEKSYFIHQFLKQ----LRDENV 420 Query: 430 FQEITKKL 437 E T +L Sbjct: 421 SLEETNQL 428 >gi|73532532|dbj|BAE19824.1| flagellum-specific ATP synthase [Edwardsiella tarda] Length = 264 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 121/264 (45%), Positives = 168/264 (63%), Gaps = 8/264 (3%) Query: 100 CWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GRV++ +P+DG D G LS + + + R + + G+R I+ Sbjct: 1 SLSGRVLDGSARPLDGLQPPDESDHGGLSSQPFNP----LQRTPITQVLDVGVRAINALL 56 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD-NLK 215 + GQR+G+FAGSG+GKS LL M AR D +++ L+GERGREV++FIE+ LG+ + Sbjct: 57 TVGRGQRMGLFAGSGVGKSVLLGMMARYTQADVIVVGLIGERGREVKDFIENILGEEGRQ 116 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 +SVV+ A +D SP+LR A IAE F +G +VLLI+DS+TR+A + REIA GE Sbjct: 117 RSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGE 176 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P +GYP VF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILDGH Sbjct: 177 PPATKGYPPYVFAKLPALVERAGNGISGGGSITAFYTVLTEGDDQQDPIADSARAILDGH 236 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR 359 +VL+R LAE G YP +D AS+SR Sbjct: 237 VVLSRRLAEAGHYPAIDIEASISR 260 >gi|168747664|ref|ZP_02772686.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4113] gi|168753796|ref|ZP_02778803.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4401] gi|168759986|ref|ZP_02784993.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4501] gi|168766851|ref|ZP_02791858.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4486] gi|168775735|ref|ZP_02800742.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4196] gi|168778872|ref|ZP_02803879.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4076] gi|168785704|ref|ZP_02810711.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC869] gi|168799991|ref|ZP_02824998.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC508] gi|195936476|ref|ZP_03081858.1| ATP synthase SpaL [Escherichia coli O157:H7 str. EC4024] gi|208805681|ref|ZP_03248018.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4206] gi|208813596|ref|ZP_03254925.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4045] gi|208819267|ref|ZP_03259587.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4042] gi|209396176|ref|YP_002272334.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4115] gi|217327024|ref|ZP_03443107.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. TW14588] gi|261226171|ref|ZP_05940452.1| ATP synthase SpaL [Escherichia coli O157:H7 str. FRIK2000] gi|261256575|ref|ZP_05949108.1| ATP synthase SpaL [Escherichia coli O157:H7 str. FRIK966] gi|187768770|gb|EDU32614.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4196] gi|188017952|gb|EDU56074.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4113] gi|189003294|gb|EDU72280.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4076] gi|189358515|gb|EDU76934.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4401] gi|189363631|gb|EDU82050.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4486] gi|189369249|gb|EDU87665.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4501] gi|189374024|gb|EDU92440.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC869] gi|189377662|gb|EDU96078.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC508] gi|208725482|gb|EDZ75083.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4206] gi|208734873|gb|EDZ83560.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4045] gi|208739390|gb|EDZ87072.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4042] gi|209157576|gb|ACI35009.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. EC4115] gi|217319391|gb|EEC27816.1| flagellum-specific ATP synthase [Escherichia coli O157:H7 str. TW14588] gi|320189204|gb|EFW63863.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli O157:H7 str. EC1212] gi|326339055|gb|EGD62870.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli O157:H7 str. 1044] gi|326343062|gb|EGD66830.1| Type III secretion cytoplasmic ATP synthase [Escherichia coli O157:H7 str. 1125] Length = 430 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 131/329 (39%), Positives = 194/329 (58%), Gaps = 5/329 (1%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRV-EKGFKTGIRVI 152 I S + G V+NA G+ ++ GD ++ ++ ++PP+ +RV +T IRVI Sbjct: 85 IQISDAFLGSVLNASGQIMERFVPDTPGDRGNLRLIDELPPSYQERRVINTPLETRIRVI 144 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 D GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 145 DGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESLKKS 204 Query: 213 -NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++R++ Sbjct: 205 VNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRDMKL 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 +GE P RGYP SVF LPRLLER GP+ KG+IT +VL++G++ +DP+ D +RSI Sbjct: 265 AAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITEFYTVLLEGEDESDPLGDEIRSI 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 LDGHI L+R LA +G YP +D L SVSR+ + + + + + E+ + Sbjct: 323 LDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKNLTTLEDLQVFID 382 Query: 392 IGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +G YR G + D A++ P + ++LKQS Sbjct: 383 LGEYRAGQNAENDFAMNARPKLTNWLKQS 411 >gi|224498797|ref|ZP_03667146.1| flagellum-specific ATP synthase [Listeria monocytogenes Finland 1988] Length = 433 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + + K M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGMAKFKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG D L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T KL Sbjct: 421 TLEETSKL 428 >gi|284801046|ref|YP_003412911.1| flagellum-specific ATP synthase [Listeria monocytogenes 08-5578] gi|284994188|ref|YP_003415956.1| flagellum-specific ATP synthase [Listeria monocytogenes 08-5923] gi|284056608|gb|ADB67549.1| flagellum-specific ATP synthase [Listeria monocytogenes 08-5578] gi|284059655|gb|ADB70594.1| flagellum-specific ATP synthase [Listeria monocytogenes 08-5923] Length = 433 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + + K M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGMAKFKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG D L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T KL Sbjct: 421 TLEETSKL 428 >gi|196033636|ref|ZP_03101048.1| putative flagellum-specific ATP synthase [Bacillus cereus W] gi|195994070|gb|EDX58026.1| putative flagellum-specific ATP synthase [Bacillus cereus W] Length = 434 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 145/370 (39%), Positives = 216/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT V +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGVYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S++ +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|47095282|ref|ZP_00232893.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes str. 1/2a F6854] gi|254829373|ref|ZP_05234060.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL N3-165] gi|254900048|ref|ZP_05259972.1| flagellum-specific ATP synthase [Listeria monocytogenes J0161] gi|254911399|ref|ZP_05261411.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes J2818] gi|254935726|ref|ZP_05267423.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes F6900] gi|47016353|gb|EAL07275.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes str. 1/2a F6854] gi|258601787|gb|EEW15112.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL N3-165] gi|258608310|gb|EEW20918.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes F6900] gi|293589337|gb|EFF97671.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes J2818] Length = 433 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + + K M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGMAKFKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG D L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T KL Sbjct: 421 TLEETSKL 428 >gi|15803394|ref|NP_289427.1| ATP synthase SpaL [Escherichia coli O157:H7 EDL933] gi|15832984|ref|NP_311757.1| ATP synthase SpaL [Escherichia coli O157:H7 str. Sakai] gi|254794811|ref|YP_003079648.1| ATP synthase SpaL [Escherichia coli O157:H7 str. TW14359] gi|12517372|gb|AAG57986.1|AE005515_8 type III secretion apparatus protein [Escherichia coli O157:H7 str. EDL933] gi|13363202|dbj|BAB37153.1| type III secretion protein ATP synthetase EivC [Escherichia coli O157:H7 str. Sakai] gi|254594211|gb|ACT73572.1| type III secretion apparatus protein [Escherichia coli O157:H7 str. TW14359] Length = 439 Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 132/331 (39%), Positives = 195/331 (58%), Gaps = 9/331 (2%) Query: 95 ISPSACWCGRVINALGKPIDG---DDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIR 150 I S + G V+NA G+ ++ D +G+L ++ ++PP+ +RV +T IR Sbjct: 94 IQISDAFLGSVLNASGQIMERFVPDTPGDRGNL--RLIDELPPSYQERRVINTPLETRIR 151 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 VID GQR+G+FA +G GK+ L+ M + D +I L+GERGREV E E Sbjct: 152 VIDGVLTCGIGQRVGIFASAGCGKTVLMHMLVNNTEADVFVIGLIGERGREVTECAESLK 211 Query: 211 GD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 N K V+V ATSD S + R A L A T+AEYF +G V+L +DS+TR+A ++R++ Sbjct: 212 KSVNAAKCVLVYATSDFSSVDRCNAALMATTVAEYFRDRGKRVVLFIDSMTRYARALRDM 271 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +GE P RGYP SVF LPRLLER GP+ KG+IT +VL++G++ +DP+ D +R Sbjct: 272 KLAAGEPPARRGYPASVFDSLPRLLERPGPT--LKGSITEFYTVLLEGEDESDPLGDEIR 329 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 SILDGHI L+R LA +G YP +D L SVSR+ + + + + + E+ + Sbjct: 330 SILDGHIYLSRKLAGQGHYPAIDVLKSVSRVFGQVTDEKHRDNAARVRKNLTTLEDLQVF 389 Query: 390 RLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 +G YR G + D A++ P + ++LKQS Sbjct: 390 IDLGEYRAGQNAENDFAMNARPKLTNWLKQS 420 >gi|229102348|ref|ZP_04233056.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-28] gi|228680995|gb|EEL35164.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-28] Length = 421 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 147/381 (38%), Positives = 221/381 (58%), Gaps = 12/381 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117 L +VI I + + P G E++ GD V + P G+V++A G+ ++ D Sbjct: 43 LCEVIAIEKENNMLLPFGQTEKVCYGDSVTLIAEDVVVPRGDHLLGKVLSANGEVLNED- 101 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 102 --AENIPLQKIKLDAPPIHAFEREEITNVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 159 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 160 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 219 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G++VLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 220 AKLATSIAEYFRDQGNDVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 278 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 279 ERSGKT--KKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 336 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V I Sbjct: 337 DSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEDI 396 Query: 414 YDFLKQSPSD-LSSEDVFQEI 433 FLKQ SD +D+ Q I Sbjct: 397 NTFLKQGRSDSFQFDDIVQAI 417 >gi|229183941|ref|ZP_04311157.1| Flagellum-specific ATP synthase [Bacillus cereus BGSC 6E1] gi|228599593|gb|EEK57197.1| Flagellum-specific ATP synthase [Bacillus cereus BGSC 6E1] Length = 429 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S++ +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|228914328|ref|ZP_04077943.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845322|gb|EEM90358.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 429 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S++ +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|30261747|ref|NP_844124.1| flagellum-specific ATP synthase [Bacillus anthracis str. Ames] gi|47526969|ref|YP_018318.1| flagellum-specific ATP synthase [Bacillus anthracis str. 'Ames Ancestor'] gi|49184578|ref|YP_027830.1| flagellum-specific ATP synthase [Bacillus anthracis str. Sterne] gi|49480938|ref|YP_035869.1| flagellum-specific ATP synthase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65319018|ref|ZP_00391977.1| COG1157: Flagellar biosynthesis/type III secretory pathway ATPase [Bacillus anthracis str. A2012] gi|165869417|ref|ZP_02214076.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0488] gi|167633458|ref|ZP_02391783.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0442] gi|167639099|ref|ZP_02397372.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0193] gi|170686315|ref|ZP_02877537.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0465] gi|170706497|ref|ZP_02896957.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0389] gi|177650573|ref|ZP_02933540.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0174] gi|190566502|ref|ZP_03019420.1| putative flagellum-specific ATP synthase [Bacillus anthracis Tsiankovskii-I] gi|227815492|ref|YP_002815501.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. CDC 684] gi|229600159|ref|YP_002866147.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0248] gi|254683239|ref|ZP_05147100.1| flagellum-specific ATP synthase [Bacillus anthracis str. CNEVA-9066] gi|254723826|ref|ZP_05185612.1| flagellum-specific ATP synthase [Bacillus anthracis str. A1055] gi|254734591|ref|ZP_05192303.1| flagellum-specific ATP synthase [Bacillus anthracis str. Western North America USA6153] gi|254741000|ref|ZP_05198688.1| flagellum-specific ATP synthase [Bacillus anthracis str. Kruger B] gi|254755243|ref|ZP_05207277.1| flagellum-specific ATP synthase [Bacillus anthracis str. Vollum] gi|254759779|ref|ZP_05211803.1| flagellum-specific ATP synthase [Bacillus anthracis str. Australia 94] gi|300117332|ref|ZP_07055122.1| flagellum-specific ATP synthase [Bacillus cereus SJ1] gi|30255975|gb|AAP25610.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. Ames] gi|47502117|gb|AAT30793.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. 'Ames Ancestor'] gi|49178505|gb|AAT53881.1| flagellum-specific ATP synthase, putative [Bacillus anthracis str. Sterne] gi|49332494|gb|AAT63140.1| flagellum-specific ATP synthase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164714857|gb|EDR20375.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0488] gi|167512889|gb|EDR88262.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0193] gi|167531496|gb|EDR94174.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0442] gi|170128595|gb|EDS97462.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0389] gi|170670012|gb|EDT20753.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0465] gi|172083717|gb|EDT68777.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0174] gi|190562637|gb|EDV16604.1| putative flagellum-specific ATP synthase [Bacillus anthracis Tsiankovskii-I] gi|227004999|gb|ACP14742.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. CDC 684] gi|229264567|gb|ACQ46204.1| putative flagellum-specific ATP synthase [Bacillus anthracis str. A0248] gi|298725167|gb|EFI65819.1| flagellum-specific ATP synthase [Bacillus cereus SJ1] Length = 434 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 144/370 (38%), Positives = 216/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S++ +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|16799799|ref|NP_470067.1| flagellum-specific ATP synthase [Listeria innocua Clip11262] gi|16413176|emb|CAC95956.1| lin0724 [Listeria innocua Clip11262] Length = 433 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 156/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + G ++ + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILN--EEAGTAKFKQKMPLEAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A NR + + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D I Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--KNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T K+ Sbjct: 421 TLEETSKM 428 >gi|47091679|ref|ZP_00229475.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes str. 4b H7858] gi|254854543|ref|ZP_05243891.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL R2-503] gi|254932004|ref|ZP_05265363.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes HPB2262] gi|300764529|ref|ZP_07074522.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL N1-017] gi|47019998|gb|EAL10735.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes str. 4b H7858] gi|258607943|gb|EEW20551.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL R2-503] gi|293583555|gb|EFF95587.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes HPB2262] gi|300514883|gb|EFK41937.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL N1-017] gi|328475676|gb|EGF46425.1| flagellum-specific ATP synthase [Listeria monocytogenes 220] Length = 433 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + + K M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEAGVAKFKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG D L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T KL Sbjct: 421 TLEETSKL 428 >gi|254824004|ref|ZP_05229005.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL J1-194] gi|293593231|gb|EFG00992.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL J1-194] Length = 433 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 157/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + + K M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEAGVAKFKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG D L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T KL Sbjct: 421 TLEETSKL 428 >gi|313620038|gb|EFR91555.1| flagellar protein export ATPase FliI [Listeria innocua FSL S4-378] Length = 433 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 156/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + G ++ + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILN--EEAGTAKFKQKMPLEAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A NR + + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D I Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--KNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T K+ Sbjct: 421 TLEETSKM 428 >gi|217425166|ref|ZP_03456661.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 576] gi|254186859|ref|ZP_04893375.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei Pasteur 52237] gi|157934543|gb|EDO90213.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei Pasteur 52237] gi|217391771|gb|EEC31798.1| type III secretion protein ATP synthetase [Burkholderia pseudomallei 576] Length = 435 Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 120/295 (40%), Positives = 175/295 (59%), Gaps = 3/295 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P R+ +E+ TG+R ID GQR G+FA +G GK++L++M D ++ Sbjct: 130 PDYAARRPIERRLATGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVV 189 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E + ++VVV ATSD S + R A L A TIAEYF G + Sbjct: 190 ALIGERGREVSEFVERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCD 249 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L LDS+TR+A ++R++A +GE P RGYP SVF +LPRLLER P G+ITA Sbjct: 250 VMLFLDSMTRYARALRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRVGSITAFY 307 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DPI D +RSI+DGH+ L+R L + +P +D L S SRL D+ A + Sbjct: 308 TVLLENEEEPDPIGDEIRSIVDGHVYLSRQLGAKSHFPAIDVLRSASRLFDEIADAPHRA 367 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 L + R +E + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 368 LAKRFRQHLARIDEMQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 422 >gi|52143708|ref|YP_083120.1| flagellum-specific ATP synthase [Bacillus cereus E33L] gi|51977177|gb|AAU18727.1| flagellum-specific ATP synthase [Bacillus cereus E33L] Length = 434 Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 144/371 (38%), Positives = 218/371 (58%), Gaps = 13/371 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGD- 116 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEDA 115 Query: 117 DSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 D++ + ++ PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GK Sbjct: 116 DNIPLQKIKLD----APPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 171 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233 STLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ Sbjct: 172 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLR 231 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +L Sbjct: 232 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 290 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + Sbjct: 291 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 348 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412 L SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V Sbjct: 349 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEG 408 Query: 413 IYDFLKQSPSD 423 I FLKQ SD Sbjct: 409 INTFLKQGRSD 419 >gi|289433994|ref|YP_003463866.1| flagellum-specific ATP synthase FliI [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170238|emb|CBH26778.1| flagellum-specific ATP synthase FliI [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 433 Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 156/428 (36%), Positives = 236/428 (55%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQMYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G+ ++ + G ++ + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGEILN--EEAGTAKFKQKMPLEAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A NR + + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D I Sbjct: 128 PIHAFNRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + ELP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KLGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ ++ Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPENQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 + S + + ++E +G D + + + I+ FLKQ L E+V Sbjct: 365 ENASKIREWMSIYQENELYFKLGTIEQTNDNASIFTSKEKSYFIHQFLKQ----LRDENV 420 Query: 430 FQEITKKL 437 E T +L Sbjct: 421 SLEETNQL 428 >gi|260775671|ref|ZP_05884567.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus ATCC BAA-450] gi|260608087|gb|EEX34256.1| Type III secretion cytoplasmic ATP synthase [Vibrio coralliilyticus ATCC BAA-450] Length = 450 Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 151/422 (35%), Positives = 233/422 (55%), Gaps = 20/422 (4%) Query: 11 LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVC--LGDFV-VHQGKNSDNLGQVIRINL 67 LAE L+ G ++SI +S++ +GD V K++ L +V+ + Sbjct: 18 LAEMKQAALIRVEGQVTSIQGTL----IVSRFPAPRIGDLCEVWPNKSATLLAEVVAFDD 73 Query: 68 DIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGD-------DSL 119 + V++ + + + G LV + R+ GRV++ G+ + G+ D Sbjct: 74 EKVWLSALNPLDGVEAGAKLVPLYLPHRVRVGDFALGRVLDGFGRDMKGEGGVFSLLDVT 133 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 G + ++ + P ++ R+ TG+R ID L GQR+G+FAG+G GK+TL++ Sbjct: 134 QSGSAKV-LIDDIDPT-DKPRISHPMPTGVRAIDALLTLGEGQRVGLFAGAGCGKTTLIA 191 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTA 238 AR D ++ L+GERGRE+ EFIE L + L+ ++V+V ATSD S R A TA Sbjct: 192 EIARGMPCDVIVFGLIGERGRELNEFIEYELDEELQARTVLVCATSDRSSTERARAAFTA 251 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 IAE F +G VLL++DS+TRFA + REI +GE P G+P SV + +PRLLER G Sbjct: 252 TAIAEAFRDQGKKVLLMIDSLTRFARAQREIGLAAGEPPGRGGFPPSVAALMPRLLERAG 311 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 PS K G+ITA+ +VL++ D+ DP+AD RS+LDGHI+L+R LA+ G YP +D L S+S Sbjct: 312 PSSK--GSITAIYTVLIEQDSMADPVADEARSLLDGHIILSRKLADRGHYPAIDVLPSLS 369 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 R + + + L+ + + + +G Y+PG D + D AV Q + FL+ Sbjct: 370 RTMSNVTTQEHQIAARRFRELLAAYRDVELLIKLGEYQPGSDPLTDVAVDQHAAMMTFLQ 429 Query: 419 QS 420 QS Sbjct: 430 QS 431 >gi|188026434|ref|ZP_02962069.2| hypothetical protein PROSTU_04162 [Providencia stuartii ATCC 25827] gi|188019853|gb|EDU57893.1| hypothetical protein PROSTU_04162 [Providencia stuartii ATCC 25827] Length = 413 Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 123/308 (39%), Positives = 187/308 (60%), Gaps = 8/308 (2%) Query: 133 PPA--MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PPA +R+ +++ TGIR ID GQRIG+FA +G GK++L++M D Sbjct: 106 PPASVTSRRPIDEPLITGIRAIDGLLTCGLGQRIGIFAAAGSGKTSLMNMIINHAKADIH 165 Query: 191 IISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +++L+GERGREV EFIE+ + ++V++ ATSD PI R A L A TIAEYF + Sbjct: 166 VVALIGERGREVIEFIEELQASPHAAQTVLIYATSDSPPIERCNAALLATTIAEYFRDRN 225 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VLL +DS+TR+A ++R++A +GELP RGYP SVF +LP LLER P ++G+ITA Sbjct: 226 RHVLLFVDSMTRYARALRDVALAAGELPARRGYPASVFEQLPMLLER--PGRMQQGSITA 283 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 +VL++ + +DPI D +RSILDGHI L+ LA +G YP +D L S+SR+ K + Sbjct: 284 FYTVLLESEEESDPIGDEIRSILDGHIYLSHKLAGKGHYPAIDILHSISRVFQKVTTDTH 343 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 ++ + + + R E+ + +G Y+ G D A+ + I FL+Q + + Sbjct: 344 RQAATKVRDRLSRLEQIQLYLELGEYQRGESEDNDNALDKKEDIEQFLQQK---MDEAEH 400 Query: 430 FQEITKKL 437 F+ + +L Sbjct: 401 FETVLNRL 408 >gi|228907382|ref|ZP_04071240.1| Flagellum-specific ATP synthase [Bacillus thuringiensis IBL 200] gi|228852243|gb|EEM97039.1| Flagellum-specific ATP synthase [Bacillus thuringiensis IBL 200] Length = 429 Score = 219 bits (558), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 147/381 (38%), Positives = 220/381 (57%), Gaps = 12/381 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GDLV + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDLVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD-LSSEDVFQEI 433 FLKQ SD +D+ Q I Sbjct: 405 NTFLKQGRSDSFQFDDIVQAI 425 >gi|75761139|ref|ZP_00741131.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218896682|ref|YP_002445093.1| putative flagellum-specific ATP synthase [Bacillus cereus G9842] gi|74491367|gb|EAO54591.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|218543979|gb|ACK96373.1| putative flagellum-specific ATP synthase [Bacillus cereus G9842] Length = 434 Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 145/370 (39%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVILISEDVVVPRGNHLLGKVLSANGEVLNED- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LGD ++KSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGDEGMRKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|229090710|ref|ZP_04221943.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-42] gi|228692652|gb|EEL46378.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-42] Length = 429 Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 144/371 (38%), Positives = 218/371 (58%), Gaps = 13/371 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGD- 116 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVIPRGNHLLGKVLSANGEVLNEDA 110 Query: 117 DSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 D++ + ++ PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GK Sbjct: 111 DNIPLQKIKLD----APPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 166 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233 STLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ Sbjct: 167 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLR 226 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +L Sbjct: 227 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 285 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + Sbjct: 286 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 343 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412 L SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V Sbjct: 344 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEG 403 Query: 413 IYDFLKQSPSD 423 I FLKQ SD Sbjct: 404 INTFLKQGRSD 414 >gi|167724229|ref|ZP_02407465.1| ATP synthase SpaL [Burkholderia pseudomallei DM98] Length = 292 Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 118/281 (41%), Positives = 170/281 (60%), Gaps = 3/281 (1%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206 TG+R ID GQR G+FA +G GK++L++M D +++L+GERGREV EF+ Sbjct: 1 TGVRAIDGLLACGVGQRFGIFAAAGCGKTSLMNMMIEHAAADVYVVALIGERGREVSEFV 60 Query: 207 EDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 E + ++VVV ATSD S + R A L A TIAEYF G +V+L LDS+TR+A + Sbjct: 61 ERMRRSGSRDRTVVVYATSDRSSVDRCNAALVATTIAEYFRDLGCDVMLFLDSMTRYARA 120 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 +R++A +GE P RGYP SVF +LPRLLER P G+ITA +VL++ + DPI Sbjct: 121 LRDLALATGEAPARRGYPASVFEQLPRLLER--PGRTRAGSITAFYTVLLENEEEPDPIG 178 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 D +RSI+DGH+ L+R L +G +P +D L S SRL D+ A + L + R +E Sbjct: 179 DEIRSIVDGHVYLSRQLGAKGHFPAIDVLRSASRLFDEIADAPHRALAKRFRQHLARIDE 238 Query: 386 TRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 + +G YR G + D A+ + P + FL+Q+ + S+ Sbjct: 239 MQVFLDLGEYRRGENPENDDALDRRPALDAFLQQAVDEASA 279 >gi|228900331|ref|ZP_04064561.1| Flagellum-specific ATP synthase [Bacillus thuringiensis IBL 4222] gi|228859366|gb|EEN03796.1| Flagellum-specific ATP synthase [Bacillus thuringiensis IBL 4222] Length = 429 Score = 219 bits (558), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 145/370 (39%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVILISEDVVVPRGNHLLGKVLSANGEVLNED- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LGD ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGDEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|228945352|ref|ZP_04107707.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814324|gb|EEM60590.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 429 Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|229096235|ref|ZP_04227208.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-29] gi|229115190|ref|ZP_04244600.1| Flagellum-specific ATP synthase [Bacillus cereus Rock1-3] gi|228668330|gb|EEL23762.1| Flagellum-specific ATP synthase [Bacillus cereus Rock1-3] gi|228687195|gb|EEL41100.1| Flagellum-specific ATP synthase [Bacillus cereus Rock3-29] Length = 367 Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 143/368 (38%), Positives = 215/368 (58%), Gaps = 12/368 (3%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 + P G E++ GD V + P G+V++A G+ ++ + + +I Sbjct: 2 LLPFGQTEKVCYGDSVTLIAEDVVVPRGDHLLGKVLSANGEVLNEN---AENIPLQKIKL 58 Query: 131 KVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKSTLL M A++ D Sbjct: 59 DAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKAD 118 Query: 189 KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A A +IAEYF Sbjct: 119 INVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIAEYFRD 178 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +G+NVLL++DS+TRFA + R + ELP+ G + S + +LLER G + +KG+I Sbjct: 179 QGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--QKGSI 235 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L SVSR+ ++ S Sbjct: 236 TGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSP 295 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD-LS 425 + +L + + ++ ++E +G + + + + ++V I FLKQ SD Sbjct: 296 NHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEDINTFLKQGRSDSFQ 355 Query: 426 SEDVFQEI 433 +D+ Q I Sbjct: 356 FDDIVQAI 363 >gi|332311140|gb|EGJ24235.1| Flagellar protein export ATPase FliI [Listeria monocytogenes str. Scott A] Length = 394 Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 144/384 (37%), Positives = 214/384 (55%), Gaps = 14/384 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117 L +VI I + + P ++++ GD V+ + I G+V+NA G ++ + Sbjct: 15 LCEVISIEKENNMLLPFNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEA 74 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + K M + + PP A +R + +TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 75 GVAKFKQKMPL--EAPPIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKS 132 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234 TLL M AR+ D +I LVGERGREV++F+ LG D L+KSV+V ATSDES +++ A Sbjct: 133 TLLGMIARNAKADINVIGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRA 192 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAE+F +G VLL++DS+TRFA + R + +LP+ G + S + +LL Sbjct: 193 AKLATSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLL 251 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + + G+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L Sbjct: 252 ERSGKT--QNGSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVL 309 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ + K S + + ++E +G D + + + I Sbjct: 310 GSVSRVMEEIVPESQWKTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFI 369 Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437 + FLKQ L E V E T KL Sbjct: 370 HQFLKQ----LRDESVTLEETSKL 389 >gi|218902864|ref|YP_002450698.1| putative flagellum-specific ATP synthase [Bacillus cereus AH820] gi|218538318|gb|ACK90716.1| putative flagellum-specific ATP synthase [Bacillus cereus AH820] Length = 434 Score = 219 bits (557), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|229155320|ref|ZP_04283431.1| Flagellum-specific ATP synthase [Bacillus cereus ATCC 4342] gi|228628245|gb|EEK84961.1| Flagellum-specific ATP synthase [Bacillus cereus ATCC 4342] Length = 429 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVIPRGNHLLGKVLSANGEVLNEN- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 K +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AKNIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|255591126|ref|XP_002535442.1| flagellum-specific ATP synthase alpha subunit, putative [Ricinus communis] gi|223523079|gb|EEF26938.1| flagellum-specific ATP synthase alpha subunit, putative [Ricinus communis] Length = 260 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 113/240 (47%), Positives = 154/240 (64%), Gaps = 1/240 (0%) Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239 AR D +++ L+GERGREV+EFIE LG + L +SVVV A +D S ++R A Sbjct: 1 MARYTTADVIVVGLIGERGREVQEFIEQILGPEGLARSVVVAAPADVSALMRLQGANYAT 60 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 IAE F +G NVLLI+DS+TR+A + REIA GE P +GYP SVF++LP L+ER G Sbjct: 61 AIAERFRQQGKNVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERTGN 120 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + +G+ITA +VL +GD+ DPIADS R+ILDGHIVLNR+LAE G YP +D S+SR Sbjct: 121 GARGEGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLNRTLAESGHYPAIDIEQSISR 180 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 S + ++ L L R+ +D+ +G Y+PG D +LD A+ + I FL+Q Sbjct: 181 AMHNITSKEHQQAARLLKQLYSRYLRNQDLIAVGAYQPGSDPMLDIAIKKRDQINAFLQQ 240 >gi|228984833|ref|ZP_04145005.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775031|gb|EEM23425.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 429 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + +++ I Sbjct: 345 DSVSRIMEEIVSQTHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKIEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|46906967|ref|YP_013356.1| flagellum-specific ATP synthase [Listeria monocytogenes serotype 4b str. F2365] gi|226223347|ref|YP_002757454.1| H+-transporting ATP synthase alpha chain FliI, flagellar-specific [Listeria monocytogenes Clip81459] gi|46880233|gb|AAT03533.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes serotype 4b str. F2365] gi|225875809|emb|CAS04512.1| Putative H+-transporting ATP synthase alpha chain FliI, flagellar-specific [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 433 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 156/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + + K M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEAGVAKFKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T KL Sbjct: 421 TLEETSKL 428 >gi|218988954|gb|ACL13617.1| invasion protein InvC [Salmonella enterica subsp. salamae serovar Sofia] Length = 431 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 123/297 (41%), Positives = 176/297 (59%), Gaps = 3/297 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P +R V + TG+R ID GQR+G+FA +G GK+ L+ M D +I Sbjct: 124 PSYASRVGVHEPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTEADVFVI 183 Query: 193 SLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 L+GERGREV EF++ + K K V+V ATSD + R A A T+AEYF +G Sbjct: 184 GLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYFRDQGKR 243 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V+L +DS+TR+A ++R++A SGE P RGYP SVF LPRLLER P +G+ITA Sbjct: 244 VVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATSEGSITAFY 301 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+ + + + Sbjct: 302 TVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVTTPTHAE 361 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 S++ L+ R EE + +G YRPG ++ D+A+ + +L Q + SS D Sbjct: 362 QASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYSSFD 418 >gi|328467281|gb|EGF38361.1| flagellum-specific ATP synthase [Listeria monocytogenes 1816] Length = 387 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 144/384 (37%), Positives = 214/384 (55%), Gaps = 14/384 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDD 117 L +VI I + + P ++++ GD V+ + I G+V+NA G ++ + Sbjct: 8 LCEVISIEKENNMLLPFNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEA 67 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + K M + + PP A +R + +TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 68 GVAKFKQKMPL--EAPPIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKS 125 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMA 234 TLL M AR+ D +I LVGERGREV++F+ LG D L+KSV+V ATSDES +++ A Sbjct: 126 TLLGMIARNAKADINVIGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRA 185 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAE+F +G VLL++DS+TRFA + R + +LP+ G + S + +LL Sbjct: 186 AKLATSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLL 244 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + + G+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L Sbjct: 245 ERSGKT--QNGSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVL 302 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ + K S + + ++E +G D + + + I Sbjct: 303 GSVSRVMEEIVPESQWKTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFI 362 Query: 414 YDFLKQSPSDLSSEDVFQEITKKL 437 + FLKQ L E V E T KL Sbjct: 363 HQFLKQ----LRDESVTLEETSKL 382 >gi|56414846|ref|YP_151921.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197363774|ref|YP_002143411.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56129103|gb|AAV78609.1| virulence-associated secretory apparatus ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197095251|emb|CAR60802.1| virulence-associated secretory apparatus ATP synthase [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 431 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 124/303 (40%), Positives = 180/303 (59%), Gaps = 4/303 (1%) Query: 128 IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 ++ PP+ +R V + TG+R ID GQR+G+FA +G GK+ L+ M Sbjct: 118 VIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTE 177 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +I L+GERGREV EF++ + K K V+V ATSD + R A A T+AEYF Sbjct: 178 ADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYF 237 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G V+L +DS+TR+A ++R++A SGE P RGYP SVF LPRLLER P +G Sbjct: 238 RDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATSEG 295 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL++ + DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+ + Sbjct: 296 SITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVT 355 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + + S++ L+ R EE + +G YRPG ++ D+A+ + +L Q + S Sbjct: 356 TPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYS 415 Query: 426 SED 428 S D Sbjct: 416 SFD 418 >gi|312913912|dbj|BAJ37886.1| flagellum-specific ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] Length = 431 Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 124/303 (40%), Positives = 180/303 (59%), Gaps = 4/303 (1%) Query: 128 IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 ++ PP+ +R V + TG+R ID GQR+G+FA +G GK+ L+ M Sbjct: 118 VIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTE 177 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +I L+GERGREV EF++ + K K V+V ATSD + R A A T+AEYF Sbjct: 178 ADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYF 237 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G V+L +DS+TR+A ++R++A SGE P RGYP SVF LPRLLER P +G Sbjct: 238 RDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATSEG 295 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL++ + DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+ + Sbjct: 296 SITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVT 355 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + + S++ L+ R EE + +G YRPG ++ D+A+ + +L Q + S Sbjct: 356 TPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYS 415 Query: 426 SED 428 S D Sbjct: 416 SFD 418 >gi|301053286|ref|YP_003791497.1| flagellum-specific ATP synthase [Bacillus anthracis CI] gi|300375455|gb|ADK04359.1| flagellum-specific ATP synthase [Bacillus cereus biovar anthracis str. CI] Length = 434 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 144/371 (38%), Positives = 218/371 (58%), Gaps = 13/371 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGD- 116 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIVEDVVIPRGNHLLGKVLSANGEVLNEDA 115 Query: 117 DSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 D++ + ++ PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GK Sbjct: 116 DNIPLQKIKLD----APPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 171 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233 STLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ Sbjct: 172 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLR 231 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +L Sbjct: 232 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 290 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + Sbjct: 291 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 348 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412 L SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V Sbjct: 349 LDSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEG 408 Query: 413 IYDFLKQSPSD 423 I FLKQ SD Sbjct: 409 INTFLKQGRSD 419 >gi|16761671|ref|NP_457288.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16766200|ref|NP_461815.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143155|ref|NP_806497.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62181396|ref|YP_217813.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161615806|ref|YP_001589771.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550257|ref|ZP_02344014.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993129|ref|ZP_02574224.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230964|ref|ZP_02656022.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168235934|ref|ZP_02660992.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168242631|ref|ZP_02667563.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168261983|ref|ZP_02683956.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168463971|ref|ZP_02697888.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820409|ref|ZP_02832409.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444136|ref|YP_002042135.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194448712|ref|YP_002046854.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471262|ref|ZP_03077246.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194735197|ref|YP_002115846.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250901|ref|YP_002147791.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262942|ref|ZP_03163016.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198246034|ref|YP_002216863.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387383|ref|ZP_03213995.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928219|ref|ZP_03219419.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205353837|ref|YP_002227638.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207858156|ref|YP_002244807.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213425704|ref|ZP_03358454.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213580299|ref|ZP_03362125.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213649907|ref|ZP_03379960.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|224584672|ref|YP_002638470.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238909661|ref|ZP_04653498.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289829398|ref|ZP_06547010.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|60415901|sp|P0A1B9|SPAL_SALTY RecName: Full=Probable ATP synthase SpaL; AltName: Full=Invasion protein InvC gi|60415902|sp|P0A1C0|SPAL_SALTI RecName: Full=Probable ATP synthase SpaL; AltName: Full=Invasion protein InvC gi|25290468|pir||AB0852 H+-transporting two-sector ATPase (EC 3.6.3.14) - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16421442|gb|AAL21774.1| surface presentation of antigens [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16503972|emb|CAD06001.1| secretory apparatus ATP synthase (associated with virulence) [Salmonella enterica subsp. enterica serovar Typhi] gi|29138788|gb|AAO70357.1| virulence-associated secretory apparatus ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62129029|gb|AAX66732.1| surface presentation of antigens; secretory proteins [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161365170|gb|ABX68938.1| hypothetical protein SPAB_03597 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402799|gb|ACF63021.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194407016|gb|ACF67235.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457626|gb|EDX46465.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194710699|gb|ACF89920.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195633641|gb|EDX52055.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197214604|gb|ACH52001.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241197|gb|EDY23817.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197290878|gb|EDY30232.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197940550|gb|ACH77883.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604481|gb|EDZ03026.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204322541|gb|EDZ07738.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205273618|emb|CAR38605.1| secretory apparatus ATP synthase (associated with virulence) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324685|gb|EDZ12524.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328758|gb|EDZ15522.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334542|gb|EDZ21306.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205337988|gb|EDZ24752.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205342956|gb|EDZ29720.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205348978|gb|EDZ35609.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206709959|emb|CAR34313.1| secretory apparatus ATP synthase (associated with virulence) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224469199|gb|ACN47029.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261248030|emb|CBG25863.1| secretory apparatus ATP synthase (associated with virulence) [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267995022|gb|ACY89907.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301159453|emb|CBW18971.1| secretory apparatus ATP synthase (associated with virulence) [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|320087299|emb|CBY97064.1| surface presentation of antigens [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|322614288|gb|EFY11219.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322621648|gb|EFY18501.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322624509|gb|EFY21342.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628840|gb|EFY25623.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633433|gb|EFY30175.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635991|gb|EFY32699.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322639699|gb|EFY36384.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322646882|gb|EFY43385.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650650|gb|EFY47055.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654737|gb|EFY51056.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658958|gb|EFY55211.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322664475|gb|EFY60669.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668276|gb|EFY64433.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673744|gb|EFY69845.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677805|gb|EFY73868.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322681365|gb|EFY77397.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322683767|gb|EFY79777.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322715880|gb|EFZ07451.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323131246|gb|ADX18676.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323193844|gb|EFZ79047.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200314|gb|EFZ85396.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323203183|gb|EFZ88212.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323205570|gb|EFZ90535.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210081|gb|EFZ94984.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323216384|gb|EGA01111.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323221131|gb|EGA05562.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226953|gb|EGA11135.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323230763|gb|EGA14881.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323234886|gb|EGA18972.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323238925|gb|EGA22975.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241625|gb|EGA25656.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248228|gb|EGA32164.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251188|gb|EGA35061.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323256072|gb|EGA39810.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263207|gb|EGA46745.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323264290|gb|EGA47796.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271116|gb|EGA54544.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326624625|gb|EGE30970.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326628946|gb|EGE35289.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] gi|332989766|gb|AEF08749.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 431 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 124/303 (40%), Positives = 180/303 (59%), Gaps = 4/303 (1%) Query: 128 IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 ++ PP+ +R V + TG+R ID GQR+G+FA +G GK+ L+ M Sbjct: 118 VIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTE 177 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +I L+GERGREV EF++ + K K V+V ATSD + R A A T+AEYF Sbjct: 178 ADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYF 237 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G V+L +DS+TR+A ++R++A SGE P RGYP SVF LPRLLER P +G Sbjct: 238 RDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATSEG 295 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL++ + DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+ + Sbjct: 296 SITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVT 355 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + + S++ L+ R EE + +G YRPG ++ D+A+ + +L Q + S Sbjct: 356 TPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYS 415 Query: 426 SED 428 S D Sbjct: 416 SFD 418 >gi|296162495|ref|ZP_06845286.1| ATPase, FliI/YscN family [Burkholderia sp. Ch1-1] gi|295887308|gb|EFG67135.1| ATPase, FliI/YscN family [Burkholderia sp. Ch1-1] Length = 440 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 129/333 (38%), Positives = 187/333 (56%), Gaps = 9/333 (2%) Query: 90 WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFK 146 WG F +A GRV++ LG P+DG + + S + S+ +N R + F Sbjct: 89 WGMF---DAAGLLGRVVDGLGNPLDGGPAP-QPLASAAVQSRTGATLNPLERPVITTPFA 144 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206 TG+R ID GQR G+FA +G GKST++ M A D V+++L+GERGREV EFI Sbjct: 145 TGVRAIDGLLTCGVGQRTGIFAPAGGGKSTIMGMIANGASTDAVVVALIGERGREVAEFI 204 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 D+L ++VV ATSD R A A +A + G NVLL+ DS+TR+A ++ Sbjct: 205 HDHLERRRASTIVVAATSDRPAAERIKAAELAAQVAVGLRASGRNVLLLFDSLTRYARAL 264 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 RE+ GE P+ G+P SVF++LPRL+E G + +G+ITA +VL D + +DP+A+ Sbjct: 265 RELGLAVGEPPLRGGFPPSVFAQLPRLIESAGVT--AQGSITAFYTVLADEADLSDPVAE 322 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 RS+LDGHI L+ L G YP +D L S SRL + A + + + + R+EE Sbjct: 323 EARSLLDGHIQLSSKLGAAGHYPAIDILRSRSRLMTRVAGAAHQAESNRVRDWLARYEEV 382 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + IG Y+ G D D+A+ + I FL+Q Sbjct: 383 ELLLQIGEYQHGNDADTDRAIDRRAAIERFLRQ 415 >gi|196039083|ref|ZP_03106390.1| putative flagellum-specific ATP synthase [Bacillus cereus NVH0597-99] gi|196030228|gb|EDX68828.1| putative flagellum-specific ATP synthase [Bacillus cereus NVH0597-99] Length = 434 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ D Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNED- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|228926785|ref|ZP_04089853.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121301|ref|ZP_04250532.1| Flagellum-specific ATP synthase [Bacillus cereus 95/8201] gi|228662146|gb|EEL17755.1| Flagellum-specific ATP synthase [Bacillus cereus 95/8201] gi|228832898|gb|EEM78467.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 429 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 142/371 (38%), Positives = 218/371 (58%), Gaps = 13/371 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNENA 110 Query: 118 SLGKGDLSME-IMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 ++ ++ I PP A R+ + F+TGI+ ID + GQ++G+FAGSG+GK Sbjct: 111 E----NMPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKMGIFAGSGVGK 166 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233 STLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ Sbjct: 167 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLR 226 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +L Sbjct: 227 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 285 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + Sbjct: 286 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 343 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412 L SVSR+ ++ S++ +L + + ++ ++E +G + + + + ++V Sbjct: 344 LDSVSRIMEEIVSSNHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEG 403 Query: 413 IYDFLKQSPSD 423 I FLKQ SD Sbjct: 404 INTFLKQGRSD 414 >gi|21492905|ref|NP_659980.1| type III secretion system ATP synthase protein [Rhizobium etli CFN 42] gi|218674849|ref|ZP_03524518.1| type III secretion system ATP synthase protein [Rhizobium etli GR56] gi|21467330|gb|AAM54993.1| type III secretion system ATP synthase protein [Rhizobium etli CFN 42] gi|327192839|gb|EGE59765.1| type III secretion system ATP synthase protein [Rhizobium etli CNPAF512] Length = 439 Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 117/283 (41%), Positives = 175/283 (61%), Gaps = 3/283 (1%) Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 ++R+ + + F +GI +D GQRIG+F G GKSTL+S ++ D ++ +LV Sbjct: 137 LSRRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNKADVIVCALV 196 Query: 196 GERGREVREFIEDYLGDNLKKSV-VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREV EF+ D + + + +V +V+ATSD + R A +TA IAEYF +G +VLL Sbjct: 197 GERGREVGEFVADNMPEGVASNVALVLATSDRPALERFKAVMTATAIAEYFREQGKHVLL 256 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DS+TR A ++RE+ +GE PV RG+P SVF+ LP++ ER G S G +TA +VL Sbjct: 257 VIDSVTRMARALREVGLAAGEPPVRRGFPPSVFAVLPQIFERAGNS--ANGTMTAFYTVL 314 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V+G+ +DPIA+ RS+LDGHIVL+ +A G +P +D LAS SR S ++ Sbjct: 315 VEGEEQDDPIAEETRSLLDGHIVLSDKIARAGNFPAIDVLASRSRTMSAVVSESHRQAAD 374 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 L L+ ++E + +G YR G D +D+AV + +I FL Sbjct: 375 RLRALLALYDEVELLIRVGEYRQGRDAAVDEAVAKHGLIQRFL 417 >gi|283478614|emb|CAY74530.1| Type III secretion system ATPase SpaI/InvC [Erwinia pyrifoliae DSM 12163] Length = 413 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 122/290 (42%), Positives = 178/290 (61%), Gaps = 9/290 (3%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ + + TGIR ID GQRIG+FA +G GK++L++M D +I L+GE Sbjct: 113 RKPITEPLLTGIRAIDGLLTCGQGQRIGIFATAGCGKTSLMNMLIEHSEADIYVIGLIGE 172 Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV EF+E + + +V+V ATSD S + R A A +IAEYFS G+NVLL + Sbjct: 173 RGREVTEFVESMKKSSRRSRIVIVYATSDRSSVERSNAAQIASSIAEYFSELGNNVLLFV 232 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DSITR+A ++R++A + GE+PV RGYP SVF LP+LLER P G+ITA +VL++ Sbjct: 233 DSITRYARALRDVALSMGEMPVRRGYPASVFEALPKLLER--PGRFLTGSITAFYTVLIE 290 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 + D I D VRSILDGHI L+R LA +G YP ++ L S+SR+ + +++++ + Sbjct: 291 NEEDPDVIGDEVRSILDGHIYLSRKLAAKGHYPAINVLNSISRVFSQVTERNQQQMANCF 350 Query: 377 THLIHRFEETRDIRL---IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L+ R RD++L +G Y G + D A + + +FLKQ ++ Sbjct: 351 RDLLQR---QRDMQLFIDLGEYHRGENENNDIAFDKNEQMEEFLKQDMTE 397 >gi|217965186|ref|YP_002350864.1| flagellar protein export ATPase FliI [Listeria monocytogenes HCC23] gi|290894014|ref|ZP_06556989.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL J2-071] gi|217334456|gb|ACK40250.1| flagellar protein export ATPase FliI [Listeria monocytogenes HCC23] gi|290556460|gb|EFD89999.1| flagellum-specific ATP synthase FliI [Listeria monocytogenes FSL J2-071] gi|307570255|emb|CAR83434.1| flagellum-specific ATP synthase [Listeria monocytogenes L99] Length = 433 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 155/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + G ++ + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILN--EEAGTAKFKQKMPLEAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRTEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--KNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T KL Sbjct: 421 TLEETSKL 428 >gi|313610094|gb|EFR85422.1| flagellar protein export ATPase FliI [Listeria monocytogenes FSL F2-208] Length = 433 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 155/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + G ++ + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILN--EEAGTAKFKQKMPLEAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRTEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--KNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T KL Sbjct: 421 TLEETSKL 428 >gi|404287|emb|CAA51921.1| surface presentation of antigens [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 335 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 124/303 (40%), Positives = 180/303 (59%), Gaps = 4/303 (1%) Query: 128 IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 ++ PP+ +R V + TG+R ID GQR+G+FA +G GK+ L+ M Sbjct: 22 VIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTE 81 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +I L+GERGREV EF++ + K K V+V ATSD + R A A T+AEYF Sbjct: 82 ADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYF 141 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G V+L +DS+TR+A ++R++A SGE P RGYP SVF LPRLLER P +G Sbjct: 142 RDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGATSEG 199 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL++ + DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+ + Sbjct: 200 SITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVT 259 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + + S++ L+ R EE + +G YRPG ++ D+A+ + +L Q + S Sbjct: 260 TPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYS 319 Query: 426 SED 428 S D Sbjct: 320 SFD 322 >gi|85058543|ref|YP_454245.1| ATP synthase SpaL [Sodalis glossinidius str. 'morsitans'] gi|45504751|gb|AAS66842.1| YsaN [Sodalis glossinidius] gi|84779063|dbj|BAE73840.1| type III secretion apparatus SpaL/InvC [Sodalis glossinidius str. 'morsitans'] Length = 435 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 123/286 (43%), Positives = 173/286 (60%), Gaps = 9/286 (3%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ + + T IR ID HGQR+G+FA +G GK++L++M D ++ L+GE Sbjct: 135 REPIAEKLITRIRAIDGLLTCGHGQRLGIFAAAGCGKTSLMNMLIEHSEADVYVVGLIGE 194 Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV EFIE+ + VV+V +TSD S + R A A T+AEYF +G NVLL + Sbjct: 195 RGREVTEFIEELKHSSRSGKVVLVNSTSDRSSVERCNAAQVATTVAEYFRDQGKNVLLFI 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DSITR+A ++R++A + GELP RGYP SVF LP+LLER P + G+ITA +VL++ Sbjct: 255 DSITRYARALRDMALSMGELPARRGYPASVFERLPKLLER--PGSSQLGSITAFYTVLLE 312 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 + D I D VRSILDGHI L+ +LA +G YP +D L S SRL + +++ Sbjct: 313 NEEEPDAIGDEVRSILDGHIYLSHTLAAQGHYPAIDILRSTSRLFLQITDKQQQRAAVRF 372 Query: 377 THLIHRFEETRDIRL---IGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L+ R RD++L +G YR G + D A + I+ DFL+Q Sbjct: 373 RDLLVR---QRDMQLYLDLGEYRRGENQENDNAFDKENIMSDFLRQ 415 >gi|152975161|ref|YP_001374678.1| flagellum-specific ATP synthase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023913|gb|ABS21683.1| ATPase, FliI/YscN family [Bacillus cytotoxicus NVH 391-98] Length = 434 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 131/304 (43%), Positives = 189/304 (62%), Gaps = 8/304 (2%) Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PP A R+ + + F+TGI+ ID + GQ+IG+FAGSG+GKSTLL M A++ D Sbjct: 128 PPIHAFEREEITEVFETGIKSIDAMLTIGVGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 187 Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +ISLVGERGREV++FI LG+ +KKSVVVVATSDES +++ A A +IAEYF +G Sbjct: 188 VISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLRAAKLATSIAEYFRDQG 247 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +NVLL++DS+TRFA + R + ELP+ G + S + +LLER G + +KG+IT Sbjct: 248 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KKGSITG 304 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L SVSR+ ++ + D Sbjct: 305 IYTVLVDGDDLNGPVPDLARGILDGHIVLTRELATLNHYPAISVLDSVSRIMEEIVTPDH 364 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSS-E 427 KL + + + ++E +G + + + + +++ I FLKQ +D E Sbjct: 365 WKLANEIRKTLSIYKENELYFKLGTIQENEENAYIFECKNKIDGINTFLKQGRTDCYHFE 424 Query: 428 DVFQ 431 D+ Q Sbjct: 425 DIVQ 428 >gi|315281381|ref|ZP_07870018.1| flagellar protein export ATPase FliI [Listeria marthii FSL S4-120] gi|313614978|gb|EFR88485.1| flagellar protein export ATPase FliI [Listeria marthii FSL S4-120] Length = 433 Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 154/428 (35%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + G ++ + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILN--EEAGTAKFKQKMPLEAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T K+ Sbjct: 421 TLEETSKI 428 >gi|259908642|ref|YP_002648998.1| ATP synthase SpaL [Erwinia pyrifoliae Ep1/96] gi|224964264|emb|CAX55771.1| Type III secretion apparatus [Erwinia pyrifoliae Ep1/96] Length = 431 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 122/290 (42%), Positives = 178/290 (61%), Gaps = 9/290 (3%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ + + TGIR ID GQRIG+FA +G GK++L++M D +I L+GE Sbjct: 131 RKPITEPLLTGIRAIDGLLTCGQGQRIGIFATAGCGKTSLMNMLIEHSEADIYVIGLIGE 190 Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV EF+E + + +V+V ATSD S + R A A +IAEYFS G+NVLL + Sbjct: 191 RGREVTEFVESMKKSSRRSRIVIVYATSDRSSVERSNAAQIASSIAEYFSELGNNVLLFV 250 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DSITR+A ++R++A + GE+PV RGYP SVF LP+LLER P G+ITA +VL++ Sbjct: 251 DSITRYARALRDVALSMGEMPVRRGYPASVFEALPKLLER--PGRFLTGSITAFYTVLIE 308 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 + D I D VRSILDGHI L+R LA +G YP ++ L S+SR+ + +++++ + Sbjct: 309 NEEDPDVIGDEVRSILDGHIYLSRKLAAKGHYPAINVLNSISRVFSQVTERNQQQMANCF 368 Query: 377 THLIHRFEETRDIRL---IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L+ R RD++L +G Y G + D A + + +FLKQ ++ Sbjct: 369 RDLLQR---QRDMQLFIDLGEYHRGENENNDIAFDKNEQMEEFLKQDMTE 415 >gi|42780842|ref|NP_978089.1| flagellum-specific ATP synthase [Bacillus cereus ATCC 10987] gi|42736762|gb|AAS40697.1| flagellum-specific ATP synthase, putative [Bacillus cereus ATCC 10987] Length = 434 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 215/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEN- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDEGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S + +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|116872105|ref|YP_848886.1| flagellum-specific ATP synthase [Listeria welshimeri serovar 6b str. SLCC5334] gi|116740983|emb|CAK20103.1| flagellum-specific ATP synthase [Listeria welshimeri serovar 6b str. SLCC5334] Length = 433 Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 155/428 (36%), Positives = 233/428 (54%), Gaps = 20/428 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + + M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEFLLGKVLNASGDILNEEAGIAPYKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D I Sbjct: 128 PIHAFSRAEITETLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINI 187 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEEGLQKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L SVSR+ ++ + Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLGSVSRVMEEIVPESQW 364 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 K S + + ++E +G D + + + I+ FLKQ L E V Sbjct: 365 KTASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFLKQ----LRDESV 420 Query: 430 FQEITKKL 437 E T K+ Sbjct: 421 TLEETNKM 428 >gi|228964732|ref|ZP_04125839.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794982|gb|EEM42481.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar sotto str. T04001] Length = 429 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 146/381 (38%), Positives = 219/381 (57%), Gaps = 12/381 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD-LSSEDVFQEI 433 FLKQ SD +D+ Q I Sbjct: 405 NTFLKQGRSDSFQFDDIVQAI 425 >gi|196045076|ref|ZP_03112309.1| putative flagellum-specific ATP synthase [Bacillus cereus 03BB108] gi|196024078|gb|EDX62752.1| putative flagellum-specific ATP synthase [Bacillus cereus 03BB108] Length = 434 Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 144/371 (38%), Positives = 216/371 (58%), Gaps = 13/371 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGD- 116 L +VI I + + P E++ GD V + P G+V++A G ++ D Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIEEDVVIPRGNHLLGKVLSANGGVLNEDA 115 Query: 117 DSLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 D++ + ++ PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GK Sbjct: 116 DNIPLQKIKLD----APPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGK 171 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233 STLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ Sbjct: 172 STLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLR 231 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 A A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +L Sbjct: 232 AAKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKL 290 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 LER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + Sbjct: 291 LERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISV 348 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPI 412 L SVSR+ ++ S +L + + ++ ++E +G + + + + ++V Sbjct: 349 LDSVSRIMEEIVSPTHWQLANEMRKILSVYKENELYFKLGTIQENAENAYIFECKNKVEG 408 Query: 413 IYDFLKQSPSD 423 I FLKQ SD Sbjct: 409 INTFLKQGRSD 419 >gi|312172191|emb|CBX80448.1| Type III secretion system ATPase SpaI/InvC [Erwinia amylovora ATCC BAA-2158] Length = 431 Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 120/287 (41%), Positives = 174/287 (60%), Gaps = 3/287 (1%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ + + TGIR ID GQR+G+FA +G GK++L++M D +I L+GE Sbjct: 131 RKTITEPLLTGIRAIDGLLTCGQGQRVGIFATAGCGKTSLMNMLIEHSQADIYVIGLIGE 190 Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV EF+E + + V++V ATSD S + R A A +IAEYFS G NVLL + Sbjct: 191 RGREVTEFVESMRHSSRRSRVILVYATSDRSSVERTNAAQIASSIAEYFSDMGKNVLLFI 250 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DSITR+A ++R++A + GE+P RGYP SVF LP+LLER P G ITA +VL++ Sbjct: 251 DSITRYARALRDVALSMGEMPARRGYPASVFEALPKLLER--PGCFITGTITAFYTVLIE 308 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 + D I D VRSILDGHI L+R LA +G YP ++ L S+SR+ + + ++++ +S Sbjct: 309 NEEEPDIIGDEVRSILDGHIYLSRKLAAKGHYPAINVLNSLSRVFSQVTNCHQQQMANSF 368 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L+ R E + +G YR G + D A+ + + FLKQ ++ Sbjct: 369 RDLLQRQSEMQLFIDLGEYRRGENETNDIAIDKSIQMEAFLKQDVTE 415 >gi|229172396|ref|ZP_04299955.1| Flagellum-specific ATP synthase [Bacillus cereus MM3] gi|228610867|gb|EEK68130.1| Flagellum-specific ATP synthase [Bacillus cereus MM3] Length = 429 Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 145/370 (39%), Positives = 216/370 (58%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVAEDVVIPRGNHLLGKVLSANGEVLN--E 108 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 ++ L +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 109 NVENIPLQ-KIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ +KKSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPTHWQLANEMRKILSVYKENELYFKLGTIQESAENSYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|190894058|ref|YP_001984352.1| type III secretion system ATP synthase protein [Rhizobium etli CIAT 652] gi|190699719|gb|ACE93802.1| type III secretion system ATP synthase protein [Rhizobium etli CIAT 652] Length = 439 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 117/283 (41%), Positives = 175/283 (61%), Gaps = 3/283 (1%) Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 ++R+ + + F +GI +D GQRIG+F G GKSTL+S ++ D ++ +LV Sbjct: 137 LSRRPIRQPFTSGIAALDGLLTCGQGQRIGIFGAPGAGKSTLVSQIVANNKADVIVCALV 196 Query: 196 GERGREVREFIEDYLGDNLKKSV-VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGREV EF+ + + + +V +VVATSD + R A +TA IAEYF +G +VLL Sbjct: 197 GERGREVGEFVAGNMPEGVPSNVTLVVATSDRPALERFKAVMTATAIAEYFREQGKHVLL 256 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++DS+TR A ++RE+ +GE PV RG+P SVF+ LP++ ER G S G +TA +VL Sbjct: 257 VIDSVTRMARALREVGLAAGEPPVRRGFPPSVFAVLPQIFERAGNS--ANGMMTAFYTVL 314 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V+G+ +DPIA+ RS+LDGHIVL+ +A+ G +P +D LAS SR S ++ Sbjct: 315 VEGEEQDDPIAEETRSLLDGHIVLSDKIAKAGNFPAIDVLASRSRTMSAVVSESHRQAAD 374 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 L L+ ++E + +G YR G D +D+AV + +I FL Sbjct: 375 RLRALLALYDEVELLIRVGEYRQGRDAAVDEAVAKHGLIQRFL 417 >gi|47566132|ref|ZP_00237170.1| type III secretion cytoplasmic ATPase SctN TC0040 [Bacillus cereus G9241] gi|47557049|gb|EAL15379.1| type III secretion cytoplasmic ATPase SctN TC0040 [Bacillus cereus G9241] Length = 434 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEN- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ +KKS+VVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSIVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--KKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPTHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|118477185|ref|YP_894336.1| flagellum-specific ATP synthase [Bacillus thuringiensis str. Al Hakam] gi|118416410|gb|ABK84829.1| flagellum-specific ATP synthase [Bacillus thuringiensis str. Al Hakam] Length = 434 Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVIPRGNHLLGKVLSANGEVLNEN- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPTHWQLANEMRKILSVYKENELYFKLGTIQENTENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|222095373|ref|YP_002529433.1| flagellum-specific ATP synthase [Bacillus cereus Q1] gi|221239431|gb|ACM12141.1| flagellum-specific ATP synthase [Bacillus cereus Q1] Length = 434 Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 142/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEN- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KS+VVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSIVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDEGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPTHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|292488063|ref|YP_003530940.1| type III secretion system ATPase SpaI/InvC [Erwinia amylovora CFBP1430] gi|292899274|ref|YP_003538643.1| type III secretion system protein [Erwinia amylovora ATCC 49946] gi|291199122|emb|CBJ46236.1| type III secretion system protein [Erwinia amylovora ATCC 49946] gi|291553487|emb|CBA20532.1| Type III secretion system ATPase SpaI/InvC [Erwinia amylovora CFBP1430] Length = 431 Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 120/287 (41%), Positives = 174/287 (60%), Gaps = 3/287 (1%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ + + TGIR ID GQR+G+FA +G GK++L++M D +I L+GE Sbjct: 131 RKTITEPLLTGIRAIDGLLTCGQGQRVGIFATAGCGKTSLMNMLIEHSQADIYVIGLIGE 190 Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV EF+E + + V++V ATSD S + R A A +IAEYFS G NVLL + Sbjct: 191 RGREVTEFVESMRHSSRRSRVILVYATSDRSSVERTNAAQIASSIAEYFSDMGKNVLLFI 250 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DSITR+A ++R++A + GE+P RGYP SVF LP+LLER P G ITA +VL++ Sbjct: 251 DSITRYARALRDVALSMGEMPARRGYPASVFEALPKLLER--PGCFITGTITAFYTVLIE 308 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 + D I D VRSILDGHI L+R LA +G YP ++ L S+SR+ + + ++++ +S Sbjct: 309 NEEEPDIIGDEVRSILDGHIYLSRKLAAKGHYPAINVLNSLSRVFSQVTNCHQQQMANSF 368 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L+ R E + +G YR G + D A+ + + FLKQ ++ Sbjct: 369 RDLLQRQSEMQLFIDLGEYRRGENEKNDIAIDKSIQMEAFLKQDVTE 415 >gi|228952129|ref|ZP_04114224.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229069301|ref|ZP_04202591.1| Flagellum-specific ATP synthase [Bacillus cereus F65185] gi|229078931|ref|ZP_04211483.1| Flagellum-specific ATP synthase [Bacillus cereus Rock4-2] gi|229127075|ref|ZP_04256074.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-Cer4] gi|229178158|ref|ZP_04305529.1| Flagellum-specific ATP synthase [Bacillus cereus 172560W] gi|228605288|gb|EEK62738.1| Flagellum-specific ATP synthase [Bacillus cereus 172560W] gi|228656428|gb|EEL12267.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-Cer4] gi|228704345|gb|EEL56779.1| Flagellum-specific ATP synthase [Bacillus cereus Rock4-2] gi|228713788|gb|EEL65673.1| Flagellum-specific ATP synthase [Bacillus cereus F65185] gi|228807661|gb|EEM54185.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 429 Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|30019794|ref|NP_831425.1| flagellum-specific ATP synthase [Bacillus cereus ATCC 14579] gi|218233432|ref|YP_002366435.1| flagellum-specific ATP synthase [Bacillus cereus B4264] gi|29895339|gb|AAP08626.1| Flagellum-specific ATP synthase [Bacillus cereus ATCC 14579] gi|218161389|gb|ACK61381.1| putative flagellum-specific ATP synthase [Bacillus cereus B4264] Length = 434 Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|228920460|ref|ZP_04083805.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229189846|ref|ZP_04316857.1| Flagellum-specific ATP synthase [Bacillus cereus ATCC 10876] gi|228593654|gb|EEK51462.1| Flagellum-specific ATP synthase [Bacillus cereus ATCC 10876] gi|228839090|gb|EEM84386.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 429 Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQQNEENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|229160713|ref|ZP_04288705.1| Flagellum-specific ATP synthase [Bacillus cereus R309803] gi|228622728|gb|EEK79562.1| Flagellum-specific ATP synthase [Bacillus cereus R309803] Length = 429 Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 145/379 (38%), Positives = 217/379 (57%), Gaps = 12/379 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVAVPRGNHLLGKVLSANGEVLNEN- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ +KKSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S + + + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPNHWQFANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD-LSSEDVFQ 431 FLKQ +D ED+ Q Sbjct: 405 NTFLKQGRADCFHFEDIVQ 423 >gi|228938863|ref|ZP_04101463.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971744|ref|ZP_04132365.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978353|ref|ZP_04138730.1| Flagellum-specific ATP synthase [Bacillus thuringiensis Bt407] gi|228781370|gb|EEM29571.1| Flagellum-specific ATP synthase [Bacillus thuringiensis Bt407] gi|228787834|gb|EEM35792.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820712|gb|EEM66737.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 429 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|326939363|gb|AEA15259.1| flagellum-specific ATP synthase [Bacillus thuringiensis serovar chinensis CT-43] Length = 434 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|229029429|ref|ZP_04185512.1| Flagellum-specific ATP synthase [Bacillus cereus AH1271] gi|228731888|gb|EEL82787.1| Flagellum-specific ATP synthase [Bacillus cereus AH1271] Length = 429 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 130/306 (42%), Positives = 189/306 (61%), Gaps = 8/306 (2%) Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKSTLL M A++ D Sbjct: 123 PPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 182 Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +ISLVGERGREV++FI LG+ +KKS+VVVATSDES +++ A A +IAEYF +G Sbjct: 183 VISLVGERGREVKDFIRKELGEEGMKKSIVVVATSDESHLMQLRAAKLATSIAEYFRDQG 242 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +NVLL++DS+TRFA + R + ELP+ G + S + +LLER G + +KG+IT Sbjct: 243 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--QKGSITG 299 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L SVSR+ ++ S Sbjct: 300 IYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPTH 359 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD-LSSE 427 +L + + ++ ++E +G + + + + ++V I FLKQ SD + Sbjct: 360 WQLANEMRKILSIYKENELYFKLGTIQENEENAYVFECKNKVEGINSFLKQGRSDRFQFD 419 Query: 428 DVFQEI 433 D+ Q + Sbjct: 420 DIVQAV 425 >gi|212711705|ref|ZP_03319833.1| hypothetical protein PROVALCAL_02780 [Providencia alcalifaciens DSM 30120] gi|212685807|gb|EEB45335.1| hypothetical protein PROVALCAL_02780 [Providencia alcalifaciens DSM 30120] Length = 430 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 122/292 (41%), Positives = 178/292 (60%), Gaps = 5/292 (1%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ + + TGIR ID GQR+G+FA +G GK++L++M D I++L+GE Sbjct: 130 RRPINEPMVTGIRAIDGLLTCGLGQRMGIFAAAGSGKTSLMNMLINQAHGDIHIVALIGE 189 Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV EFIE+ + K+++V ATSD PI R A L A +AEYF G +VLL + Sbjct: 190 RGREVIEFIEELKQSPHADKTILVYATSDSPPIERCNAALLATAMAEYFRDLGRHVLLYV 249 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TR+A ++R++A +GELP RGYP SVF +LP LLER P ++G ITA +VL++ Sbjct: 250 DSMTRYARALRDVALATGELPARRGYPASVFEQLPLLLER--PGRVKQGAITAFYTVLLE 307 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 ++ DPI D +RSILDGHI L+ LA G YP +D L S+SR+ K + + ++ + Sbjct: 308 SEDEADPIGDEIRSILDGHIYLSHKLAGRGHYPAIDILHSISRVFQKVTTPEHRQFAVDV 367 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 + R E+ + +G Y+ G D+A+ + I FL+QS + SED Sbjct: 368 RENLSRLEQIQLYLELGEYQRGESQENDRALDKQSNINQFLQQSMDE--SED 417 >gi|229149951|ref|ZP_04278179.1| Flagellum-specific ATP synthase [Bacillus cereus m1550] gi|228633632|gb|EEK90233.1| Flagellum-specific ATP synthase [Bacillus cereus m1550] Length = 429 Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMQKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|229138449|ref|ZP_04267038.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST26] gi|228644986|gb|EEL01229.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST26] Length = 429 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 146/381 (38%), Positives = 221/381 (58%), Gaps = 12/381 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLN--E 108 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 ++ L +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 109 NVENIPLQ-KIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ +KKS+VVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSIVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDEGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--KKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPTHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD-LSSEDVFQEI 433 FLKQ SD +D+ Q + Sbjct: 405 NTFLKQGRSDRFQFDDIVQAV 425 >gi|292487267|ref|YP_003530139.1| type III secretion system ATPase SpaI/InvC [Erwinia amylovora CFBP1430] gi|292900361|ref|YP_003539730.1| type III secretion system protein [Erwinia amylovora ATCC 49946] gi|291200209|emb|CBJ47337.1| type III secretion system protein [Erwinia amylovora ATCC 49946] gi|291552686|emb|CBA19731.1| Type III secretion system ATPase SpaI/InvC [Erwinia amylovora CFBP1430] gi|312171375|emb|CBX79634.1| Type III secretion system ATPase SpaI/InvC [Erwinia amylovora ATCC BAA-2158] Length = 431 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 133/374 (35%), Positives = 204/374 (54%), Gaps = 22/374 (5%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGK------ 111 QVI N + + + S +++ G+ FR++ S G +++A G Sbjct: 47 FAQVIGFNKEHTLLSLLNDNNGFSRDNVLLPTGKPFRVAVSERTLGAILDATGTIQGRLD 106 Query: 112 --PI---DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 P+ G ++L G + + + P A+ TG+R ID GQR+G+ Sbjct: 107 GGPVAAPTGGENLETGGVPRDFTQRKPIAVP-------LATGVRAIDGLLTCGQGQRMGI 159 Query: 167 FAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV-ATSD 225 FA +G GK++L+SM D +I L+GERGREV EF+E+ + + VV+V ATSD Sbjct: 160 FAAAGCGKTSLMSMIIEHSEADIYVIGLIGERGREVTEFVEELRRSSRRSKVVLVYATSD 219 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 S + R A A T+AEYF +G NVLL +DS+TR+A ++R++A + GELP RGYP S Sbjct: 220 RSCVERCNAAQVASTVAEYFCEQGKNVLLFIDSVTRYARALRDVALSMGELPARRGYPAS 279 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 VF LP+LLER P G+I+A +VL++ + +D I D VRSILDGHI L++ LA + Sbjct: 280 VFEALPKLLER--PGRFLTGSISAFYTVLIENEEESDVIGDEVRSILDGHIYLSKKLAAK 337 Query: 346 GRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK 405 G YP +D L S+SR+ + + ++L + + R + + +G Y+ G + D Sbjct: 338 GHYPAIDVLQSISRVFQQVTQPEHQQLATHFRDYLVRQNDMQLFIDLGEYKRGENEDNDA 397 Query: 406 AVHQVPIIYDFLKQ 419 A + + FLKQ Sbjct: 398 AFDKKSAMEAFLKQ 411 >gi|324325767|gb|ADY21027.1| flagellum-specific ATP synthase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 434 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 142/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLNEN- 114 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 115 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KS+VVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSIVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDEGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPTHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 410 NTFLKQGRSD 419 >gi|217959233|ref|YP_002337781.1| flagellum-specific ATP synthase [Bacillus cereus AH187] gi|217063731|gb|ACJ77981.1| putative flagellum-specific ATP synthase [Bacillus cereus AH187] Length = 434 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 146/381 (38%), Positives = 221/381 (58%), Gaps = 12/381 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 56 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLN--E 113 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 ++ L +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 114 NVENIPLQ-KIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 172 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ +KKS+VVVATSDES +++ A Sbjct: 173 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMKKSIVVVATSDESHLMQLRA 232 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 233 AKLATSIAEYFRDEGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 291 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 292 ERSGKT--KKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 349 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 350 DSVSRIMEEIVSPTHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 409 Query: 414 YDFLKQSPSD-LSSEDVFQEI 433 FLKQ SD +D+ Q + Sbjct: 410 NTFLKQGRSDRFQFDDIVQAV 430 >gi|228958029|ref|ZP_04119765.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229144361|ref|ZP_04272767.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST24] gi|228639148|gb|EEK95572.1| Flagellum-specific ATP synthase [Bacillus cereus BDRD-ST24] gi|228801654|gb|EEM48535.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 429 Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 214/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ + Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLNEE- 109 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 110 --AENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|229043503|ref|ZP_04191213.1| Flagellum-specific ATP synthase [Bacillus cereus AH676] gi|228725881|gb|EEL77128.1| Flagellum-specific ATP synthase [Bacillus cereus AH676] Length = 429 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 143/370 (38%), Positives = 213/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLN--- 107 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 108 EKAENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEDI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|228933033|ref|ZP_04095896.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826634|gb|EEM72405.1| Flagellum-specific ATP synthase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 429 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 141/368 (38%), Positives = 215/368 (58%), Gaps = 7/368 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ +D Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLIAEDVVIPRGNHLLGKVLSANGEVLN-ED 109 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + +++ + A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKSTL Sbjct: 110 AENIPLQKIKLDASPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTL 169 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 L M A++ D +ISLVGERGREV++FI LG+ + KSVVVVATSDES +++ A Sbjct: 170 LGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMGKSVVVVATSDESHLMQLRAAK 229 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A +IAEYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LLER Sbjct: 230 LATSIAEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLER 288 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L S Sbjct: 289 SGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDS 346 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYD 415 VSR+ ++ S + +L + + ++ ++E +G + + + + ++V I Sbjct: 347 VSRIMEEIVSPNHWQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEGINT 406 Query: 416 FLKQSPSD 423 FLKQ SD Sbjct: 407 FLKQGRSD 414 >gi|229017037|ref|ZP_04173957.1| Flagellum-specific ATP synthase [Bacillus cereus AH1273] gi|229023218|ref|ZP_04179729.1| Flagellum-specific ATP synthase [Bacillus cereus AH1272] gi|228738143|gb|EEL88628.1| Flagellum-specific ATP synthase [Bacillus cereus AH1272] gi|228744308|gb|EEL94390.1| Flagellum-specific ATP synthase [Bacillus cereus AH1273] Length = 376 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 143/367 (38%), Positives = 214/367 (58%), Gaps = 14/367 (3%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDDSLGKGDLSME-IM 129 + P E++ GD V + P G+V++A G+ ++ D ++ +E I Sbjct: 11 LLPFEQTEKVCYGDSVTLIAEDVVVPRGNHLLGKVLSANGEVLNEDAE----NIPVEKIK 66 Query: 130 SKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKSTLL M A++ Sbjct: 67 LDAPPIHAFEREEITDVFETGIKAIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKA 126 Query: 188 DKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 D +ISLVGERGREV++FI LG+ +K+SVVVVATSDES +++ A A +IAEYF Sbjct: 127 DINVISLVGERGREVKDFIRKELGEEGMKRSVVVVATSDESHLMQLRAAKLATSIAEYFR 186 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G+NVLL++DS+TRFA + R + ELP+ G + S + +LLER + +KG+ Sbjct: 187 DQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLER--SRKTKKGS 243 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L SVSR+ ++ S Sbjct: 244 ITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVS 303 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD-L 424 + +L + + ++ ++E +G + + + + ++V I FLKQ +D Sbjct: 304 PNHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNRVEDINMFLKQGRTDCF 363 Query: 425 SSEDVFQ 431 EDV Q Sbjct: 364 HFEDVVQ 370 >gi|310767459|gb|ADP12409.1| ATP synthase SpaL [Erwinia sp. Ejp617] Length = 431 Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 123/290 (42%), Positives = 176/290 (60%), Gaps = 9/290 (3%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ + + TGIR ID GQRIG+FA +G GK++L++M D +I L+GE Sbjct: 131 RKPITEPLLTGIRAIDGLLTCGQGQRIGIFATAGCGKTSLMNMLIEHSEADIYVIGLIGE 190 Query: 198 RGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV EF+E + VV+V ATSD S + R A A +IAEYFS G NVLL + Sbjct: 191 RGREVTEFVESMKKSARRSRVVLVYATSDRSSVERSNAAQIASSIAEYFSDMGYNVLLFV 250 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DSITR+A ++R++A + GE+PV RGYP SVF LP+LLER P G+ITA +VL++ Sbjct: 251 DSITRYARALRDVALSMGEMPVRRGYPASVFEALPKLLER--PGRFLTGSITAFYTVLIE 308 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 + D I D VRSILDGHI L+R LA +G YP ++ L S+SR+ + +++++ + Sbjct: 309 NEEDPDVIGDEVRSILDGHIYLSRKLAAKGHYPAINVLNSISRVFSQVTDRNQQQMANCF 368 Query: 377 THLIHRFEETRDIRL---IGGYRPGVDLILDKAVHQVPIIYDFLKQSPSD 423 L+ R RD++L +G Y G + D A + + +FLKQ ++ Sbjct: 369 RDLLQR---QRDMQLFIDLGEYHRGENENNDIAFDKNEQMEEFLKQDMTE 415 >gi|329943246|ref|ZP_08292020.1| type III secretion apparatus H+-transporting two-sector ATPase [Chlamydophila psittaci Cal10] gi|332287825|ref|YP_004422726.1| type III secretion system ATPase [Chlamydophila psittaci 6BC] gi|313848397|emb|CBY17401.1| putative flagellum-specific ATP synthase [Chlamydophila psittaci RD1] gi|325507079|gb|ADZ18717.1| type III secretion system ATPase [Chlamydophila psittaci 6BC] gi|328814793|gb|EGF84783.1| type III secretion apparatus H+-transporting two-sector ATPase [Chlamydophila psittaci Cal10] gi|328915086|gb|AEB55919.1| type III secretion cytoplasmic ATPase SctN [Chlamydophila psittaci 6BC] Length = 434 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 149/421 (35%), Positives = 224/421 (53%), Gaps = 19/421 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S ++ V LS CLG+ + K+ D L +VI + + + ++ Sbjct: 21 GLLSRVSGNLLEVQGLS--ACLGELCRICTPKHPDILAEVIGFHNQTTLLMSLSPMYHVA 78 Query: 83 LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 LG V R + S GRVI+ G P+D +SL K + ++S P M+RQ + Sbjct: 79 LGSEVLPLRRPPSLHLSDHLLGRVIDGFGNPLDNKESLPKTQIK-PLISPPPSPMSRQPI 137 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++ F TGI+ ID F L GQRIGVF+ G GKS+LLS A +I+L+GERGRE Sbjct: 138 QEIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIASGSKSTINVIALIGERGRE 197 Query: 202 VREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 VRE+IE + G ++++V + + E+ + ++ A+TIAEYF +G +VL I+DS++ Sbjct: 198 VREYIEQHASGLKHHRTIIVASPAHETAPTKVISGRAAMTIAEYFRDQGHDVLFIMDSLS 257 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ +++E+A +GE A Y SVF + ER G E+G+ITA+ ++L NH Sbjct: 258 RWIAALQEVALATGETLAAHHYAASVFHHVSEFTERAG--NNERGSITALYAILYY-PNH 314 Query: 321 NDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 D D ++S+LDGH L ++LA PP+D L S+SR A K L Sbjct: 315 PDIFTDYLKSLLDGHFFLTHQGKALAS----PPIDILLSLSRSAKKLALPHHYAAAEKLR 370 Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 L+ ++E DI +G Y PG D LD AV +P I +FL Q LSS + K+L Sbjct: 371 SLLKTYQEALDIIHLGAYSPGHDKDLDDAVKILPSIKNFLSQP---LSSYCQLENTLKEL 427 Query: 438 Q 438 + Sbjct: 428 E 428 >gi|206974741|ref|ZP_03235656.1| putative flagellum-specific ATP synthase [Bacillus cereus H3081.97] gi|206746760|gb|EDZ58152.1| putative flagellum-specific ATP synthase [Bacillus cereus H3081.97] Length = 434 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 128/295 (43%), Positives = 184/295 (62%), Gaps = 7/295 (2%) Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PP A R+ + + F+TGI+ ID + GQ+IG+FAGSG+GKSTLL M A++ D Sbjct: 128 PPIHAFEREEITEVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 187 Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A A +IAEYF +G Sbjct: 188 VISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIAEYFRDEG 247 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +NVLL++DS+TRFA + R + ELP+ G + S + +LLER G + +KG IT Sbjct: 248 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KKGAITG 304 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L SVSR+ ++ S Sbjct: 305 IYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPTH 364 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD 423 +L + + ++ ++E +G + + + + ++V I FLKQ SD Sbjct: 365 WQLANEMRKILSIYKENELYFKLGTIQENTENAYIFECKNKVEGINTFLKQGRSD 419 >gi|323155927|gb|EFZ42093.1| type III secretion system ATPase domain protein [Escherichia coli EPECa14] Length = 267 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 116/256 (45%), Positives = 157/256 (61%), Gaps = 2/256 (0%) Query: 171 GIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPIL 230 G+GKSTLL M D ++++L+GERGREV EF+ L K V+VV TSD + Sbjct: 1 GVGKSTLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALE 60 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 R A TA TIAE+F +G NVLL++DS+TR+A + R++ SGE V G+P SVF+ L Sbjct: 61 RMKAAFTATTIAEFFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFASL 120 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 P+LLER GP+ KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P Sbjct: 121 PKLLERAGPA--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPA 178 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQV 410 +D S SR+ ++ + + LI ++ + IG Y G D DKA+ Sbjct: 179 IDIGLSASRVMHNVVKSEHLRAAAECKKLIATYKNIELLIRIGEYTMGQDPEADKAIKNR 238 Query: 411 PIIYDFLKQSPSDLSS 426 I F++QS D+SS Sbjct: 239 KAIQSFIQQSTKDISS 254 >gi|270491110|ref|ZP_06208182.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27] gi|270334853|gb|EFA45632.1| flagellum-specific ATP synthase [Yersinia pestis KIM D27] gi|317374484|gb|ADV16659.1| type III secretion cytoplasmic ATP synthase [Yersinia pestis] Length = 248 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 113/236 (47%), Positives = 156/236 (66%), Gaps = 3/236 (1%) Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +++L+GERGREVREFIE LG+ L+K+V+VVATSD + R A A +IAEYF +G Sbjct: 1 MLALIGERGREVREFIESDLGEEGLRKAVLVVATSDRPSMERAKAGFVATSIAEYFRDQG 60 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VLL++DS+TRFA + REI +GE P RGYP SVF+ LPRL+ER G S K G+ITA Sbjct: 61 KRVLLLMDSVTRFARAQREIGLAAGEPPTRRGYPPSVFAALPRLMERAGQSSK--GSITA 118 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLV+GD+ +P+AD RSILDGHI+L+R LA YP +D L S SR+ ++ S + Sbjct: 119 LYTVLVEGDDMTEPVADETRSILDGHIILSRKLAAANHYPAIDVLRSASRVMNQIVSKEH 178 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 K L L+ ++EE + IG Y+ G D D+A+ ++ I +L Q +LS Sbjct: 179 KTWAGDLRRLLAKYEEVELLLQIGEYQKGQDKEADQAIERMGAIRGWLCQGTHELS 234 >gi|1870711|gb|AAB48835.1| FliI [Sinorhizobium meliloti] Length = 217 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 105/203 (51%), Positives = 147/203 (72%), Gaps = 2/203 (0%) Query: 5 LETLAQLAEDYSKN--LVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQV 62 + LA L E Y+ + GG++ +I+ +YTV+ LS++V LGDFV H+ +LG+V Sbjct: 15 VAALAGLVERYANPDFAIAPGGHVQTISPGHYTVSGLSRHVRLGDFVAHKSTTGTHLGEV 74 Query: 63 IRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKG 122 +R+ + V +CP+ G+ I + D+V G FRI+P+ WCGR INAL +PIDG +L +G Sbjct: 75 VRVEPERVVVCPIEPGDPIGIHDVVIRKGAFRIAPTDNWCGRTINALAEPIDGLGALLQG 134 Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 D+ I + PP+M R+RVE+GF+TG+R IDI +PLC G+R+G+FAGS +GKSTLLSM A Sbjct: 135 DIRRSIANTAPPSMTRKRVEQGFRTGVRAIDILSPLCLGRRLGIFAGSAVGKSTLLSMLA 194 Query: 183 RSDCFDKVIISLVGERGREVREF 205 R+D FDKV+I+LVGERGREVREF Sbjct: 195 RADAFDKVVIALVGERGREVREF 217 >gi|222082187|ref|YP_002541552.1| type III secretion system ATP synthase protein [Agrobacterium radiobacter K84] gi|221726866|gb|ACM29955.1| type III secretion system ATP synthase protein [Agrobacterium radiobacter K84] Length = 439 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 144/441 (32%), Positives = 235/441 (53%), Gaps = 14/441 (3%) Query: 5 LETLAQLAEDYSKNLVVQG-GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG--Q 61 +E LA+L + + + G ++S++ + + V +G+ + +D +G Sbjct: 2 VEALARLEKAIDQTRTRRASGRVTSVSGLLVRANVPA--VRIGELCELREPGTDEVGFAD 59 Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFR-ISPSACWCGRVINALGKPIDGDDSLG 120 V+ I + + G IS+ V GR I+ G VI+A G I + + Sbjct: 60 VVGIEGETALLSLHGTTRGISVRTEVIPTGREPVIAVGDFLLGAVIDAHGNIIRKAEGVT 119 Query: 121 --KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 G+ S + + P + R+ V + GI ID GQR+G+F G GKSTL+ Sbjct: 120 GRAGETSQPLYASPPAPLARRPVARHLPVGIPAIDGLLTCGEGQRVGIFGPPGAGKSTLV 179 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKM-APLT 237 S ++ D V+ +LVGERGRE+ EF+E + + + V+V + E P L + A LT Sbjct: 180 SDIVKNVDADVVVCALVGERGREIGEFVELVMPAGARSNAVLVTATSERPALERFKAVLT 239 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAE+F +G V+L++DS+TR A ++REI +GE PV RG+P SVF+ LP++ ER Sbjct: 240 ATAIAEHFRDRGKRVVLVVDSVTRLARALREIGLAAGEPPVRRGFPPSVFALLPQIFERA 299 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G S +G +TA +VLV+G+ DPIA+ R++LDGHIVL+ +A+ G++P +D LAS Sbjct: 300 GNS--AEGTMTAFYTVLVEGEERTDPIAEETRALLDGHIVLSDRIAQAGQFPAIDILASR 357 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR + + ++ L ++ ++E + +G Y+ G D +D+AV + +I +FL Sbjct: 358 SRTMNAVVTETHRRASDRLRSMLALYKEVELLIRVGEYQDGRDAAIDEAVRKRTLIGNFL 417 Query: 418 KQSPSDLSSEDVFQEITKKLQ 438 + S F+E +LQ Sbjct: 418 FSGHAKAPS---FEETVARLQ 435 >gi|206970526|ref|ZP_03231478.1| putative flagellum-specific ATP synthase [Bacillus cereus AH1134] gi|206734162|gb|EDZ51332.1| putative flagellum-specific ATP synthase [Bacillus cereus AH1134] Length = 434 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 128/295 (43%), Positives = 184/295 (62%), Gaps = 7/295 (2%) Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKSTLL M A++ D Sbjct: 128 PPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 187 Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A A +IAEYF +G Sbjct: 188 VISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIAEYFRDQG 247 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +NVLL++DS+TRFA + R + ELP+ G + S + +LLER G + +KG+IT Sbjct: 248 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--QKGSITG 304 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L SVSR+ ++ S Sbjct: 305 IYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPHH 364 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD 423 +L + + ++ ++E +G + + + + ++V I FLKQ SD Sbjct: 365 WQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGINTFLKQGRSD 419 >gi|229195962|ref|ZP_04322715.1| Flagellum-specific ATP synthase [Bacillus cereus m1293] gi|228587521|gb|EEK45586.1| Flagellum-specific ATP synthase [Bacillus cereus m1293] Length = 367 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 128/295 (43%), Positives = 184/295 (62%), Gaps = 7/295 (2%) Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PP A R+ + + F+TGI+ ID + GQ+IG+FAGSG+GKSTLL M A++ D Sbjct: 61 PPIHAFEREEITEVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 120 Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A A +IAEYF +G Sbjct: 121 VISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIAEYFRDEG 180 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +NVLL++DS+TRFA + R + ELP+ G + S + +LLER G + +KG IT Sbjct: 181 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--KKGAITG 237 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L SVSR+ ++ S Sbjct: 238 IYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPTH 297 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD 423 +L + + ++ ++E +G + + + + ++V I FLKQ SD Sbjct: 298 WQLANEMRKILSIYKENELYFKLGTIQENAENAYIFECKNKVEGINTFLKQGRSD 352 >gi|296502349|ref|YP_003664049.1| flagellum-specific ATP synthase [Bacillus thuringiensis BMB171] gi|296323401|gb|ADH06329.1| flagellum-specific ATP synthase [Bacillus thuringiensis BMB171] Length = 367 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 128/295 (43%), Positives = 184/295 (62%), Gaps = 7/295 (2%) Query: 133 PP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKSTLL M A++ D Sbjct: 61 PPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKSTLLGMIAKNAKADIN 120 Query: 191 IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A A +IAEYF +G Sbjct: 121 VISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRAAKLATSIAEYFRDQG 180 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +NVLL++DS+TRFA + R + ELP+ G + S + +LLER G + +KG+IT Sbjct: 181 NNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLLERSGKT--QKGSITG 237 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L SVSR+ ++ S Sbjct: 238 IYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVLDSVSRIMEEIVSPHH 297 Query: 370 KKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFLKQSPSD 423 +L + + ++ ++E +G + + + + ++V I FLKQ SD Sbjct: 298 WQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEGINTFLKQGRSD 352 >gi|238796114|ref|ZP_04639625.1| ATP synthase spaL [Yersinia mollaretii ATCC 43969] gi|238720059|gb|EEQ11864.1| ATP synthase spaL [Yersinia mollaretii ATCC 43969] Length = 430 Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 123/326 (37%), Positives = 191/326 (58%), Gaps = 8/326 (2%) Query: 101 WCGRVINALGKPIDGDDSLGK-GDLSMEIMSKV--PPAMN--RQRVEKGFKTGIRVIDIF 155 G++ NA G+ + +S + S ++ +V PP R+ V + TG+R ID Sbjct: 88 LAGKIYNAAGEEVGVLNSEAVLAEPSFTVLRRVDNPPVAVELRRPVSEPLVTGVRAIDGL 147 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNL 214 GQR+G+FA +G GK++L+SM D I++L+GERGREV EFI + + Sbjct: 148 LTCGQGQRMGIFAAAGSGKTSLMSMIMNHAVADICIVALIGERGREVTEFIHELQVSPRS 207 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 ++++V ATSD + R A L A +AEYF +G +VLL +DS+TR+A ++R++A +G Sbjct: 208 AQTILVYATSDSPAVERCNAALLATAMAEYFRDQGRDVLLFVDSMTRYARALRDVALAAG 267 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ELP RGYP SVF +LP LLER P + G+ITA +VL++ + +DPI D +RSI+DG Sbjct: 268 ELPARRGYPASVFEQLPLLLER--PGAVQHGSITAFYTVLLESEEESDPIGDEIRSIIDG 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 HI L+ LA G YP +D L S+SR+ K + ++ + ++ R ++ + +G Sbjct: 326 HIYLSAKLAGRGHYPAIDILHSISRVFSKVSTPVHRQAAAKTRDMLGRLDQIQLYLDLGE 385 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQS 420 Y+ G + D A+ +I FL+QS Sbjct: 386 YQRGENADNDHALDNREVIEGFLQQS 411 >gi|238759392|ref|ZP_04620557.1| ATP synthase spaL [Yersinia aldovae ATCC 35236] gi|238702419|gb|EEP94971.1| ATP synthase spaL [Yersinia aldovae ATCC 35236] Length = 414 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 123/333 (36%), Positives = 184/333 (55%), Gaps = 24/333 (7%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN-------------RQRVEKGFKT 147 G++ NA G+ + G LS S PP R+ V T Sbjct: 72 LAGKIYNAAGEEV--------GVLSNVTASSEPPLTTLCRVDSPPVSVNLRRPVTTPLVT 123 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIE 207 G+R ID GQR+G+FA +G GK++L+SM D +I+L+GERGREV EFI Sbjct: 124 GVRAIDGLLTCGQGQRMGIFAAAGSGKTSLMSMIMNHAVADICVIALIGERGREVTEFIH 183 Query: 208 DYLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + ++++V ATSD + R A L A +AEYF +G +VLL +DS+TR+A ++ Sbjct: 184 ELQASPRAAQTILVYATSDSPAVERCNAALLATAMAEYFRDQGKDVLLFVDSMTRYARAL 243 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 R++A +GELP RGYP SVF +LP LLER P ++G+ITA +VL++ + +DPI D Sbjct: 244 RDVALAAGELPARRGYPASVFEQLPLLLER--PGALQQGSITAFYTVLLESEEESDPIGD 301 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEET 386 +RSI+DGHI L+ LA G YP +D L S+SR+ K + ++ + ++ R + Sbjct: 302 EIRSIIDGHIYLSAQLAGRGHYPAIDVLHSISRVFSKVTTPQHRQDAAKTRDMLARLAQI 361 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +G Y+ G + D A+ +I FL+Q Sbjct: 362 QLYLDLGEYQRGENTDNDHALDNREVIESFLQQ 394 >gi|91782707|ref|YP_557913.1| ATPase FliI/YscN [Burkholderia xenovorans LB400] gi|91686661|gb|ABE29861.1| type III secretion system ATPase, FliI/YscN [Burkholderia xenovorans LB400] Length = 444 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 126/337 (37%), Positives = 186/337 (55%), Gaps = 18/337 (5%) Query: 90 WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA-------MNRQRVE 142 WG F +A GRV++ LG P+DG G + + S A + R + Sbjct: 94 WGTF---DAAGLLGRVVDGLGNPLDG------GPVPRPLASAAAQAGEGTLNPLERPVIA 144 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 F TG+R ID GQR G+FA +G GKST++ M A D ++++L+GERGREV Sbjct: 145 TPFATGVRAIDGLLTCGVGQRTGIFAPAGGGKSTIMGMIANGASTDAIVVALIGERGREV 204 Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 EFI D+L ++V+ ATSD R A A +A + G NVLL+ DS+TR+ Sbjct: 205 AEFIHDHLERRRASTIVIAATSDRPAAERIKAAELASQVAVGLRASGRNVLLLFDSLTRY 264 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A ++RE+ GE P+ G+P SVF++LPRL+E G + +G+ITA +VL D + +D Sbjct: 265 ARALRELGLAVGEPPLRGGFPPSVFAQLPRLIEAAGVT--AQGSITAFYTVLADEADLSD 322 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHR 382 P+A+ RS+LDGHI L+ L G YP +D L S SRL + +A + + + + R Sbjct: 323 PVAEEARSLLDGHIQLSSKLGAAGHYPAIDILRSRSRLMTRVAAAVHQADANRVRDWLAR 382 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 +E+ + IG Y+ G D D+A+ + I FL+Q Sbjct: 383 YEDVELLLQIGEYQRGNDADTDQAIDRRAAIVSFLRQ 419 >gi|229109206|ref|ZP_04238805.1| Flagellum-specific ATP synthase [Bacillus cereus Rock1-15] gi|228674216|gb|EEL29461.1| Flagellum-specific ATP synthase [Bacillus cereus Rock1-15] Length = 429 Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 142/370 (38%), Positives = 213/370 (57%), Gaps = 11/370 (2%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSAC-WCGRVINALGKPIDGDD 117 L +VI I + + P E++ GD V + P G+V++A G+ ++ Sbjct: 51 LCEVIAIEKENNMLLPFEQTEKVCYGDSVTLVSEDVVVPRGNHLLGKVLSANGEVLN--- 107 Query: 118 SLGKGDLSMEIMSKVPP--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + +I PP A R+ + F+TGI+ ID + GQ+IG+FAGSG+GKS Sbjct: 108 EKAENIPLQKIKLDAPPIHAFEREEITDVFETGIKSIDSMLTIGIGQKIGIFAGSGVGKS 167 Query: 176 TLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMA 234 TLL M A++ D +ISLVGERGREV++FI LG+ ++KSVVVVATSDES +++ A Sbjct: 168 TLLGMIAKNAKADINVISLVGERGREVKDFIRKELGEEGMRKSVVVVATSDESHLMQLRA 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 A +I+EYF +G+NVLL++DS+TRFA + R + ELP+ G + S + +LL Sbjct: 228 AKLATSISEYFRDQGNNVLLMMDSVTRFADARRSVDIAVKELPIG-GKTLLMESYMKKLL 286 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER G + +KG+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA YP + L Sbjct: 287 ERSGKT--QKGSITGIYTVLVDGDDLNGPVPDLARGILDGHIVLKRELATLSHYPAISVL 344 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPII 413 SVSR+ ++ S +L + + ++ ++E +G + + + + ++V I Sbjct: 345 DSVSRIMEEIVSPHHWQLANEMRKILSIYKENELYFKLGTIQENEENAYIFECKNKVEDI 404 Query: 414 YDFLKQSPSD 423 FLKQ SD Sbjct: 405 NTFLKQGRSD 414 >gi|213023037|ref|ZP_03337484.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 278 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 117/279 (41%), Positives = 168/279 (60%), Gaps = 3/279 (1%) Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208 +R ID GQR+G+FA +G GK+ L+ M D +I L+GERGREV EF++ Sbjct: 1 MRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTEADVFVIGLIGERGREVTEFVDM 60 Query: 209 YLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 + K K V+V ATSD + R A A T+AEYF +G V+L +DS+TR+A ++R Sbjct: 61 LRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYFRDQGKRVVLFIDSMTRYARALR 120 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 ++A SGE P RGYP SVF LPRLLER P +G+ITA +VL++ + DP+AD Sbjct: 121 DVALASGERPARRGYPASVFDNLPRLLER--PGATSEGSITAFYTVLLESEEEADPMADE 178 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETR 387 +RSILDGH+ L+R LA +G YP +D L SVSR+ + + + S++ L+ R EE + Sbjct: 179 IRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVTTPTHAEQASAVRKLMTRLEELQ 238 Query: 388 DIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 +G YRPG ++ D+A+ + +L Q + SS Sbjct: 239 LFIDLGEYRPGENIDNDRAMQMRDSLKAWLCQPVAQYSS 277 >gi|330975869|gb|EGH75935.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 379 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 141/358 (39%), Positives = 208/358 (58%), Gaps = 16/358 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S++ + S V GD V + S L +++ + + +G + I Sbjct: 26 GRVSAVRGILLECKIPSAKV--GDLCEVSKADGSLLLAEIVGFTQECTLLSALGPPDGIQ 83 Query: 83 LGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGK------GDLSMEIMSKVPPA 135 +G + G RI G V++ G+P+ GD LG ++ +++ P Sbjct: 84 VGAPIRPLGVAHRIGVDDSLLGCVLDGFGRPLMGD-CLGAFAGPEDRRTTLPVIADALPP 142 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 R R+ + TGIR ID L GQR+G+FAG+G GK+TL++ AR+ D ++ L+ Sbjct: 143 TQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLI 202 Query: 196 GERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GERGRE+REF++ L + L ++SV+V ATSD S + R A TA IAE F ++G VLL Sbjct: 203 GERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLL 262 Query: 255 ILDSITRFAHSIREIATNSGELPVAR-GYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 +LDS+TRFA + REI SGE P+ R G P V++ LPRL+ER G S E G+ITA+ +V Sbjct: 263 LLDSLTRFARAQREIGIASGE-PLGRGGLPPPVYTLLPRLVERAGMS--ENGSITALYTV 319 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 L++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ + ++ Sbjct: 320 LIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGREHQR 377 >gi|330945803|gb|EGH47202.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. pisi str. 1704B] Length = 271 Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 123/264 (46%), Positives = 177/264 (67%), Gaps = 7/264 (2%) Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 ++ +++ P R R+ + TGIR ID L GQR+G+FAG+G GK+TL++ AR+ Sbjct: 4 TLPVIADALPPTQRPRITRALPTGIRAIDSAILLGEGQRVGLFAGAGCGKTTLMAELARN 63 Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIA 242 DC D ++ L+GERGRE+REF++ L + L ++SV+V ATSD S + R A TA IA Sbjct: 64 MDC-DVIVFGLIGERGRELREFLDHELDETLRRRSVLVCATSDRSSMERARAAFTATAIA 122 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR-GYPTSVFSELPRLLERIGPSE 301 E F ++G VLL+LDS+TRFA + REI SGE P+ R G P SV++ LPRL+ER G S Sbjct: 123 EAFRARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMS- 180 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 E G+ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ Sbjct: 181 -ENGSITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRIL 239 Query: 362 DKAWSADEKKLVSSLTHLIHRFEE 385 + ++ + L L+ +++ Sbjct: 240 SNVTGREHQRANNRLRQLLAAYKQ 263 >gi|123443731|ref|YP_001007702.1| ATP synthase SpaL [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122090692|emb|CAL13568.1| type III secretion sytem protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 430 Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 117/299 (39%), Positives = 178/299 (59%), Gaps = 7/299 (2%) Query: 133 PPAMN-RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P ++N R+ V TG+R ID GQR+G+FA +G GK++L+SM D + Sbjct: 124 PVSVNLRRPVTTPLVTGVRAIDGLLTCGQGQRMGIFAAAGSGKTSLMSMIMNHAVADICV 183 Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I+L+GERGREV EFI + ++++V ATSD + R A L A +AEYF +G Sbjct: 184 IALIGERGREVTEFIHELQTSPRAAQTILVYATSDSPAVERCNAALLATAMAEYFRDQGK 243 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VLL +DS+TR+A ++R++A +GELP RGYP SVF +LP LLER P + G+ITA Sbjct: 244 DVLLFVDSMTRYARALRDVALAAGELPARRGYPASVFEQLPLLLER--PGALQHGSITAF 301 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VL++ + +DPI D +RSI+DGHI L+ LA G YP +D L S+SR+ K + + Sbjct: 302 YTVLLESEEESDPIGDEIRSIIDGHIYLSAQLAGRGHYPAIDILHSISRVFSKVTTPQHR 361 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS---PSDLSS 426 + + ++ R + + +G Y+ G + D A+ +I FL+Q+ P + S+ Sbjct: 362 QDAAKTRDMLGRLAQIQLYLDLGEYQRGENTDNDHALDNRDVIEGFLQQAMEEPGEFST 420 >gi|293416355|ref|ZP_06658994.1| ATP synthase in type III secretion protein SctN [Escherichia coli B185] gi|291431711|gb|EFF04694.1| ATP synthase in type III secretion protein SctN [Escherichia coli B185] Length = 431 Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 128/322 (39%), Positives = 188/322 (58%), Gaps = 6/322 (1%) Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + G+ I S P R + + TG+RVID GQR+G+FA +G GK+T Sbjct: 110 EPMSSGEEERVIDSGALPYTLRAGIHEPLVTGVRVIDGLLTCGVGQRMGIFAPAGCGKTT 169 Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS--VVVVATSDESPILRKMA 234 L+ M D +I L+GERGREV EF+E +L + +KS V+V ATSD S + R+ A Sbjct: 170 LMHMLINQTDADVFVIGLIGERGREVTEFVE-WLKQSPEKSRCVLVFATSDYSSVDRRNA 228 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 L A T+AE+F +G V+L +DS+TR+ ++R++A +GE P RGYP SVF LP LL Sbjct: 229 ALLATTVAEFFRDQGKRVVLFIDSLTRYTRALRDVALFAGEPPARRGYPASVFDSLPALL 288 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ER P G+ITA +VL++G++ DP+AD + SILDGHI L+R LA +G YP VD L Sbjct: 289 ER--PGATPGGSITAFYTVLLEGEDEVDPMADEICSILDGHIFLSRKLAGQGHYPAVDVL 346 Query: 355 ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 SVSR+ + + + + L+ R +E + + +G YR G + D+A+ + Sbjct: 347 RSVSRVFSQVTAPPHQARSVEIRRLMTRLDELQLLVDLGEYRQGENAENDRAMQLRRPLE 406 Query: 415 DFLKQSPSDLSS-EDVFQEITK 435 +L Q S SS E+ Q + + Sbjct: 407 RWLCQPVSQYSSFENTLQGMNE 428 >gi|89897912|ref|YP_515022.1| type III secretion system ATPase [Chlamydophila felis Fe/C-56] gi|89331284|dbj|BAE80877.1| type III secretory flagellar biosynthesis ATP synthase [Chlamydophila felis Fe/C-56] Length = 434 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 148/421 (35%), Positives = 221/421 (52%), Gaps = 19/421 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S ++ LS CLG+ V K D L +VI + + + ++ Sbjct: 21 GLLSKVSGTLLEAQGLS--ACLGELCRVCTPKYPDLLAEVIGFHNQTTLLMSLSPMHYVT 78 Query: 83 LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 LG V R + S GRVI+ G P+D ++L K + ++S P M+RQ + Sbjct: 79 LGSEVLPLRRPPSLHLSDHLLGRVIDGFGNPLDNKENLPKTHIK-PLISPPPLPMSRQPI 137 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++ F TGI+VID F L GQRIGVF+ G GKS+LLS A +I+L+GERGRE Sbjct: 138 QEIFPTGIKVIDAFLTLGKGQRIGVFSEPGSGKSSLLSTIASGSKSTINVIALIGERGRE 197 Query: 202 VREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 VRE+IE + G ++V++ + + E+ + M+ A+TIAEYF +G +VL I+DS++ Sbjct: 198 VREYIEQHASGLQEHRTVIIASPAHETAPTKVMSGRAAMTIAEYFRDQGHDVLFIMDSLS 257 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ +++E+A +GE A Y VF + ER G ++G+ITA+ ++L NH Sbjct: 258 RWIAALQEVALATGETLAAHNYAAYVFHHVSEFTERAG--NNDRGSITALYAIL-HYPNH 314 Query: 321 NDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 D D ++S+LDGH L ++LA PP+D L S+SR A K L Sbjct: 315 PDIFTDYLKSLLDGHFFLTNQGKALAS----PPIDILLSLSRSAKKLSLPHHYAAAEKLR 370 Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 L+ ++E DI +G Y PG D LD AV +P I FL Q LSS + K+L Sbjct: 371 SLLKTYQEALDIIHLGAYTPGHDKDLDDAVKILPNIKKFLAQP---LSSYCQLENTLKEL 427 Query: 438 Q 438 + Sbjct: 428 E 428 >gi|62185479|ref|YP_220264.1| type III secretion system ATPase [Chlamydophila abortus S26/3] gi|62148546|emb|CAH64317.1| putative flagellum-specific ATP synthase [Chlamydophila abortus S26/3] Length = 434 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 148/421 (35%), Positives = 222/421 (52%), Gaps = 19/421 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S ++ V LS CLG+ + K D L +VI + + + ++ Sbjct: 21 GLLSRVSGNLLEVQGLS--ACLGELCRICTPKYPDILAEVIGFHNQTTLLMSLSPMHHVA 78 Query: 83 LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 LG V R + S GRVI+ G P+D +SL K + ++S P M+RQ + Sbjct: 79 LGSEVLPLRRPPSLHLSDHLLGRVIDGFGNPLDNKESLPKTQIK-PLISPPPSPMSRQPI 137 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++ F TGI+ ID F L GQRIGVF+ G GKS+LLS A +I+L+GERGRE Sbjct: 138 QEIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIASGSKSTINVIALIGERGRE 197 Query: 202 VREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 VRE+IE + G ++++V + + E+ + ++ A+TIAEYF +G +VL I+DS++ Sbjct: 198 VREYIEQHASGLKHHRTIIVASPAHETAPTKVISGRAAMTIAEYFRDQGHDVLFIMDSLS 257 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ +++E+A +GE A Y SVF + ER G E+G+ITA+ ++L NH Sbjct: 258 RWIAALQEVALATGETLAAHHYAASVFHHVSEFTERAG--NNERGSITALYAILYY-PNH 314 Query: 321 NDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 D D ++S+LDGH L ++LA P +D L S+SR A K L Sbjct: 315 PDIFTDYLKSLLDGHFFLTHQGKALAS----PSIDILLSLSRSAKKLALPHHYAAAEKLR 370 Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 L+ ++E DI +G Y PG D LD AV +P I +FL Q LSS + K+L Sbjct: 371 SLLKTYQEALDIIHLGAYSPGHDKDLDDAVKILPSIKNFLSQ---PLSSYCQLENTLKEL 427 Query: 438 Q 438 + Sbjct: 428 E 428 >gi|15088603|gb|AAK84114.1|AF369954_12 YsaN [Yersinia enterocolitica] gi|2352532|gb|AAB69192.1| YsaN [Yersinia enterocolitica] Length = 465 Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 115/290 (39%), Positives = 174/290 (60%), Gaps = 4/290 (1%) Query: 133 PPAMN-RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P ++N R+ V TG+R ID GQR+G+FA +G GK++L+SM D + Sbjct: 124 PVSVNLRRPVTTPLVTGVRAIDGLLTCGQGQRMGIFAAAGSGKTSLMSMIMNHAVADICV 183 Query: 192 ISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I+L+GERGREV EFI + ++++V ATSD + R A L A +AEYF +G Sbjct: 184 IALIGERGREVTEFIHELQTSPRAAQTILVYATSDSPAVERCNAALLATAMAEYFRDQGK 243 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VLL +DS+TR+A ++R++A +GELP RGYP SVF +LP LLER P + G+ITA Sbjct: 244 DVLLFVDSMTRYARALRDVALAAGELPARRGYPASVFEQLPLLLER--PGALQHGSITAF 301 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VL++ + +DPI D +RSI+DGHI L+ LA G YP +D L S+SR+ K + + Sbjct: 302 YTVLLESEEESDPIGDEIRSIIDGHIYLSAQLAGRGHYPAIDILHSISRVFSKVTTPQHR 361 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + + ++ R + + +G Y+ G + D A+ +I FL+Q+ Sbjct: 362 QDAAKTRDMLGRLAQIQLYLDLGEYQRGENTDNDHALDNRDVIEGFLQQA 411 >gi|497222|gb|AAA74038.1| invC [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 432 Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 116/272 (42%), Positives = 165/272 (60%), Gaps = 4/272 (1%) Query: 128 IMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 ++ PP+ +R V + TG+R ID GQR+G+FA +G GK+ L+ M Sbjct: 118 VIDVAPPSYASRVGVREPLITGVRAIDGLLTCGVGQRMGIFASAGCGKTMLMHMLIEQTE 177 Query: 187 FDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 D +I L+GERGREV EF++ + K K V+V ATSD + R A A T+AEYF Sbjct: 178 ADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAAQLATTVAEYF 237 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G V+L +DS+TR+A ++R++A SGE P RGYP SVF LPRLLER P +G Sbjct: 238 RDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER--PGGTSEG 295 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA +VL++ + DP+AD +RSILDGH+ L+R LA +G YP +D L SVSR+ + Sbjct: 296 SITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSVSRVFGQVT 355 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 + + S++ L+ R EE + +G YRP Sbjct: 356 TPTHAEQASAVRKLMTRLEELQLFIDLGEYRP 387 >gi|22726545|gb|AAN05313.1|AF467290_3 InvC [primary endosymbiont of Sitophilus zeamais] Length = 436 Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 131/337 (38%), Positives = 187/337 (55%), Gaps = 17/337 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP------PAMNRQRVEKGFK 146 F+I G V+++LG D G D ++ + P R+ + + F Sbjct: 87 FQIGLGDALLGAVLDSLGNICARLD--GATDDALTVTEHRPIDVGALHFTERRPIAEKFV 144 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFI 206 T IR ID HGQ +G+FA +G GK++L++M D ++ L+GERGREV EFI Sbjct: 145 TRIRAIDGLLTCGHGQCLGIFAAAGCGKTSLMNMLIEHSEADVYVVGLIGERGREVTEFI 204 Query: 207 EDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 E+ + VV+V +TSD S R A T+AEYF +G NVLL +DSITR+A + Sbjct: 205 EELKHSSCSGKVVLVNSTSDRSAGERYNAAQVXTTVAEYFHDQGKNVLLFIDSITRYARA 264 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 +R++A + GELP RGYP SVF LP+LLER P G+ITA +VL++ D D I Sbjct: 265 LRDMALSMGELPARRGYPASVFERLPKLLER--PGSSWLGSITAFYTVLLENDEEPDAIG 322 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 D VRSILDGHI L+ +LA +G YP +D L S SRL + +++ L+ R Sbjct: 323 DEVRSILDGHIYLSPTLASQGHYPAIDILRSTSRLFLQITDQKQQRAAVRFRDLLVR--- 379 Query: 386 TRDIRL---IGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 RD++L +G YR G + D A + ++ +FL+Q Sbjct: 380 QRDMQLYLDLGEYRRGENEENDNAFDKKMVMSEFLRQ 416 >gi|284007669|emb|CBA73382.1| type III secretion sytem ATP synthase SpaL,YscN,MxiB,HrcN,EscN [Arsenophonus nasoniae] Length = 427 Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust. Identities = 115/302 (38%), Positives = 181/302 (59%), Gaps = 19/302 (6%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM---FARS 184 + + P ++R+ + F TGIR ID GQR+G+FA +G GK+ L++M +A++ Sbjct: 117 VNTNAPDFLSRKPITNYFATGIRAIDGLLTCGVGQRLGIFAAAGCGKTILMNMLINYAQA 176 Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDNLKKS------VVVVATSDESPILRKMAPLTA 238 D F +I+L+GERGREV EF+ D LK+S +++ +TSD+ + R A L A Sbjct: 177 DIF---VIALIGERGREVTEFV-----DELKRSPRGSQTILISSTSDQPAVDRCNAALVA 228 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 T+AEYF + +V+L +DSITR+ ++R++A SGELPV +G+P SVF +LP LLER Sbjct: 229 TTVAEYFRDQNKHVILFIDSITRYCRALRDVALASGELPVRKGFPASVFEQLPTLLER-- 286 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 P +K +TA ++L++ + D I D +RSILDGHI L++ LA +G YP +D L S S Sbjct: 287 PGNTQKSALTAFYTILLENEEEPDAIGDEIRSILDGHIYLSQQLAAQGHYPAIDILRSTS 346 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418 RL + ++ + H + + + ++ +G YR G + D+ + + I FL+ Sbjct: 347 RLFQQITEQQQQTAARNFQHCLTQLASLKLLQELGEYRTGENDDHDQVIKKKSAIEQFLQ 406 Query: 419 QS 420 QS Sbjct: 407 QS 408 >gi|253990943|ref|YP_003042299.1| type III secretion ATP synthase hrcN [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782393|emb|CAQ85557.1| Putative Type III secretion ATP synthase hrcN [Photorhabdus asymbiotica] Length = 406 Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 129/363 (35%), Positives = 203/363 (55%), Gaps = 19/363 (5%) Query: 87 VFHWGRFRISPSACWC---------GRVINALGKPIDGDDSL--GKGDLSMEIMSKVPPA 135 V G+ I PS +C G+VIN G+ + GD L K + I + P Sbjct: 48 VLRNGKVEI-PSRRFCFPMNEDALIGKVINCYGESLYGDAYLEMNKEYFDLPISIEPIPL 106 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV 195 NR +EK F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++ Sbjct: 107 KNRASIEKVFPTKLKIIDGLFTIGEGQRVGLFAPAGAGKTTTVSIMANNMDADVVIFAMI 166 Query: 196 GERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLL 254 GER REV EF+E +G + ++K++ +V+TS+ +P+ + + L AV+IA YF +G V+L Sbjct: 167 GERAREVVEFLEGEIGPEVIRKAITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVL 226 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 DS+TRFA R A G P+ G P V L RL+E G S G++T + +VL Sbjct: 227 YFDSLTRFA---RAQAMLDGT-PIQGGIPIGVSLALSRLVESCGNSVY--GSVTGIFTVL 280 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 ++ D +DPIA V+S++DGH+V + +A GRYP +D L S SRL +K ++ Sbjct: 281 IETDIDSDPIAHEVKSLIDGHLVYSTMIASTGRYPAIDVLKSKSRLQNKIQDKRYVQMSE 340 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEIT 434 + +++R+ + + +G Y G DL+ D A+ P I +FLKQ + E+ QE+ Sbjct: 341 RIKDMVYRYFDVELLIRVGEYEKGNDLLTDNAIELYPEIMNFLKQGYEGVEYEETLQEME 400 Query: 435 KKL 437 + L Sbjct: 401 RIL 403 >gi|29840664|ref|NP_829770.1| type III secretion system ATPase [Chlamydophila caviae GPIC] gi|29835014|gb|AAP05648.1| virulence factor transport ATPase, putative [Chlamydophila caviae GPIC] Length = 434 Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust. Identities = 150/422 (35%), Positives = 223/422 (52%), Gaps = 21/422 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S ++ V LS CLG+ + K D L +VI + + + ++ Sbjct: 21 GLLSRVSGNLLEVQGLS--ACLGELCRICTPKYPDLLAEVIGFHNQTTLLMSLSPMHYVA 78 Query: 83 LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 LG V R + S GRVI+ G P+D SL K + +++ PP M+RQ + Sbjct: 79 LGSEVLPLRRPPSLHLSDHLLGRVIDGFGNPLDNKKSLPKTHIK-PLIAPPPPPMSRQPI 137 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++ F TGI+ ID F L GQRIGVF+ G GKS+LLS A +I+L+GERGRE Sbjct: 138 QEIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIASGSKSTINVIALIGERGRE 197 Query: 202 VREFIEDYLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 VRE+IE + LK ++++V + + E+ + +A A+TIAEYF +G +VL I+DS+ Sbjct: 198 VREYIEQH-SSGLKQLRTIIVASPAHETAPTKVIAGRAAMTIAEYFRDQGHDVLFIMDSL 256 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 +R+ +++E+A +GE A Y SVF + ER G ++G+ITA+ ++L N Sbjct: 257 SRWIAALQEVALATGETLAAHQYAASVFHHVSEFTERAG--NNDRGSITALYAIL-HYPN 313 Query: 320 HNDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 H D D ++S+LDGH L ++LA PP+D L S+SR A K L Sbjct: 314 HPDIFTDYLKSLLDGHFFLTNQGKALAS----PPIDILLSLSRSAKKLSRPHHYAAAEKL 369 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436 L+ ++E DI +G Y PG D LD AV +P I FL Q LSS + K+ Sbjct: 370 RALLKTYQEALDIIQLGAYTPGQDKDLDDAVKILPNIKKFLSQP---LSSYCQLENTLKE 426 Query: 437 LQ 438 L+ Sbjct: 427 LE 428 >gi|323189411|gb|EFZ74692.1| type III secretion system ATPase domain protein [Escherichia coli RN587/1] Length = 258 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 111/247 (44%), Positives = 152/247 (61%), Gaps = 2/247 (0%) Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAV 239 M D ++++L+GERGREV EF+ L K V+VV TSD + R A TA Sbjct: 1 MICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTAT 60 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 TIAEYF +G NVLL++DS+TR+A + R++ SGE V G+P SVFS LP+LLER GP Sbjct: 61 TIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGEPDVRGGFPPSVFSSLPKLLERAGP 120 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + KG+ITA+ +VL++ DN NDPI D VRSILDGHIVL R LAEE +P +D S SR Sbjct: 121 A--PKGSITAIYTVLLESDNVNDPIGDEVRSILDGHIVLTRELAEENHFPAIDIGLSASR 178 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +++ + + LI ++ + IG Y G D DKA+ +I +F++Q Sbjct: 179 VMHNVVTSEHLRAAAECKKLIATYKNVELLIRIGEYTMGQDPEADKAIKNRKLIQNFIQQ 238 Query: 420 SPSDLSS 426 S D+SS Sbjct: 239 STKDISS 245 >gi|313056273|dbj|BAJ39854.1| probable ATP synthase VscN2 [Vibrio mimicus] Length = 420 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 123/356 (34%), Positives = 202/356 (56%), Gaps = 17/356 (4%) Query: 91 GRFRISP--------SACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQR 140 G+ I+P + G+VIN G+ + GD LG+ + + I + P R Sbjct: 66 GKVEITPRRFCFPLNESALVGKVINCYGENLYGDSYLGQAGEFIDLPIAVEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + ++KS+ +V+TS+ +P+ + + L AV+IA Y+ +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA R A G P+ G P V L RL+E G S + G++T + +VL++ + Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIQ--GSVTGIFTVLIEKEI 299 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K +L + + Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDM 359 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 ++R+ + +G Y G DL D+A+ + P I +FLKQ + E+ QE+ + Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQGFEGVEYEETLQEMER 415 >gi|313056231|dbj|BAJ39833.1| probable ATP synthase VscN2 [Vibrio mimicus] Length = 420 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 124/356 (34%), Positives = 204/356 (57%), Gaps = 17/356 (4%) Query: 91 GRFRISP--------SACWCGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140 G+ I+P + G+VIN G+ + GD LG+ G+ + + I + P R Sbjct: 66 GKVEITPRRFCFPLNESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFTMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + ++KS+ +V+TS+ +P+ + + L AV+IA Y+ +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA R A G P+ G P V L RL+E G S + G++T + +VL++ + Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIQ--GSVTGIFTVLIEKEI 299 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K +L + + Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDM 359 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 ++R+ + +G Y G DL D+A+ + P I +FLKQ + E+ QE+ + Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQGFEGVEYEETLQEMER 415 >gi|28901193|ref|NP_800848.1| putative ATPase YscN [Vibrio parahaemolyticus RIMD 2210633] gi|153836030|ref|ZP_01988697.1| VcsN2 [Vibrio parahaemolyticus AQ3810] gi|260362752|ref|ZP_05775621.1| protein VcsN2 [Vibrio parahaemolyticus K5030] gi|260880040|ref|ZP_05892395.1| protein VcsN2 [Vibrio parahaemolyticus AN-5034] gi|260895157|ref|ZP_05903653.1| protein VcsN2 [Vibrio parahaemolyticus Peru-466] gi|28809706|dbj|BAC62681.1| putative ATPase YscN [Vibrio parahaemolyticus RIMD 2210633] gi|149750784|gb|EDM61529.1| VcsN2 [Vibrio parahaemolyticus AQ3810] gi|308085776|gb|EFO35471.1| protein VcsN2 [Vibrio parahaemolyticus Peru-466] gi|308092026|gb|EFO41721.1| protein VcsN2 [Vibrio parahaemolyticus AN-5034] gi|308112352|gb|EFO49892.1| protein VcsN2 [Vibrio parahaemolyticus K5030] Length = 420 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 124/356 (34%), Positives = 204/356 (57%), Gaps = 17/356 (4%) Query: 91 GRFRISP--------SACWCGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140 G+ I+P + G+VIN G+ + GD LG+ G+ + + I + P R Sbjct: 66 GKVEITPRRFCFPLNESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + ++KS+ +V+TS+ +P+ + + L AV+IA Y+ +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA R A G P+ G P V L RL+E G S + G++T + +VL++ + Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIQ--GSVTGIFTVLIEKEI 299 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K +L + + Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDM 359 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 ++R+ + +G Y G DL D+A+ + P I +FLKQ + E+ QE+ + Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQGFEGVEYEETLQEMER 415 >gi|313056225|dbj|BAJ39830.1| probable ATP synthase VscN2 [Vibrio mimicus] gi|313056243|dbj|BAJ39839.1| probable ATP synthase VscN2 [Vibrio mimicus] gi|313056249|dbj|BAJ39842.1| probable ATP synthase VscN2 [Vibrio mimicus] gi|313056255|dbj|BAJ39845.1| probable ATP synthase VscN2 [Vibrio mimicus] gi|313056261|dbj|BAJ39848.1| probable ATP synthase VscN2 [Vibrio mimicus] Length = 420 Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 124/356 (34%), Positives = 204/356 (57%), Gaps = 17/356 (4%) Query: 91 GRFRISP--------SACWCGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140 G+ I+P + G+VIN G+ + GD LG+ G+ + + I + P R Sbjct: 66 GKVEITPRRFCFPLNESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + ++KS+ +V+TS+ +P+ + + L AV+IA Y+ +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA R A G P+ G P V L RL+E G S + G++T + +VL++ + Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIQ--GSVTGIFTVLIEKEI 299 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K +L + + Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDM 359 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 ++R+ + +G Y G DL D+A+ + P I +FLKQ + E+ QE+ + Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIERYPKIIEFLKQGFEGVEYEETLQEMER 415 >gi|15618767|ref|NP_225053.1| type III secretion system ATPase [Chlamydophila pneumoniae CWL029] gi|33242218|ref|NP_877159.1| type III secretion system ATPase [Chlamydophila pneumoniae TW-183] gi|4377175|gb|AAD18996.1| Flagellum-specific ATP Synthase [Chlamydophila pneumoniae CWL029] gi|33236729|gb|AAP98816.1| H+-transporting ATP synthase alpha chain [Chlamydophila pneumoniae TW-183] gi|269302644|gb|ACZ32744.1| flagellum-specific ATP synthase FliI [Chlamydophila pneumoniae LPCoLN] Length = 433 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 149/422 (35%), Positives = 219/422 (51%), Gaps = 21/422 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S ++ V LS CLG+ + K+ + L +VI + + + ++ Sbjct: 21 GLLSKVSGNLIEVDGLS--ACLGELCKISSTKDPNLLAEVIGFHNHTTLLMSLSPLHSVA 78 Query: 83 LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 LG V R + S GRV++A G PID + L K ++S P M RQ + Sbjct: 79 LGTEVLPLRRPPSLHLSDHLLGRVLDAFGNPIDKKEDLPKTH-RKPLLSLPPSPMMRQPI 137 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++ F TGI+ ID F L GQRIGVF+ G GKS+LLS A +I+L+GERGRE Sbjct: 138 DQIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIALGSKSTINVIALIGERGRE 197 Query: 202 VREFIEDYLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 VRE+IE + + LK +++++ A + E+ + +A A+TIAEYF +G VL I+DS+ Sbjct: 198 VREYIEKH-SNALKQQRTIIIAAPAHETAPTKVIAGRAAMTIAEYFREQGHEVLFIMDSL 256 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 +R+ +++E+A GE A Y SVF + ER G +KG+ITA+ ++L Sbjct: 257 SRWIAALQEVALARGETLSAHQYAASVFHHVSEFTERAG--NNDKGSITALYAILY-YPK 313 Query: 320 HNDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 H D D ++S+LDGH L ++LA PP+D L+S+SR A L Sbjct: 314 HPDIFTDYLKSLLDGHFFLTSQGKALAS----PPIDILSSLSRSAQALALPHHYAAAERL 369 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436 L+ + E DI +G Y PG D LDKAV +P I FL Q LSS K+ Sbjct: 370 RSLLKVYNEALDIIHLGAYTPGQDEELDKAVKLLPSIKAFLAQP---LSSYCYLDNTLKQ 426 Query: 437 LQ 438 L+ Sbjct: 427 LE 428 >gi|301336260|ref|ZP_07224462.1| type III secretion system ATPase [Chlamydia muridarum MopnTet14] Length = 434 Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 136/420 (32%), Positives = 224/420 (53%), Gaps = 15/420 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S I+ L+ CLG+ + ++S L +VI ++ + + +++ Sbjct: 21 GILSRISGTLMEAQGLA--ACLGELCHIPSFRSSPVLAEVIDLHHQTTLLLALTPVHDLA 78 Query: 83 LGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 LG V R P S GRVI+ G P+DG+ L K LS + + P ++R + Sbjct: 79 LGTEVIPLRRPASLPLSNHLLGRVIDGFGNPLDGNPPLPKAPLS-PLFASPPAPISRTPI 137 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++ F TGIR ID + GQR+G+F+ G GKS+LLS A+ +I+L+GERGRE Sbjct: 138 QEVFPTGIRAIDALLTVGEGQRVGIFSEPGGGKSSLLSTIAKGAQNTINVIALIGERGRE 197 Query: 202 VREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 VR+++ + G ++++++ +T+ ++ + +A A+TIAEYF +G VL I+DS++ Sbjct: 198 VRDYVHQHKEGLAAQRTIIIASTAYDTAASKVIAGRAAITIAEYFRDQGARVLFIMDSLS 257 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ S++E+A GE Y SVF + LER G +KG+IT+ ++L NH Sbjct: 258 RWIESLQEVALARGETLSTHHYAASVFHHVAAFLERAG--NNDKGSITSFYAML-HYANH 314 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTH 378 D D V+S+LDGH L+ +E + PP++ L S+SR A + L Sbjct: 315 PDIFNDYVKSLLDGHFFLS---PQEKSFSSPPINLLTSLSRSARQLAHPHHYAAAQELLS 371 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEITKKL 437 L+ + E DI +G Y PG D LD+A+ +P + +FL Q S+ S+ D +++ + L Sbjct: 372 LLKAYHEAIDIIQLGAYVPGQDAKLDRAIRILPSLQEFLSQPLSNYSAIHDTIEQLCRLL 431 >gi|188534040|ref|YP_001907837.1| ATP synthase SpaL [Erwinia tasmaniensis Et1/99] gi|188029082|emb|CAO96950.1| Type III secretion apparatus [Erwinia tasmaniensis Et1/99] Length = 431 Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 119/283 (42%), Positives = 164/283 (57%), Gaps = 3/283 (1%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ + + TGIR ID GQRIG+FA +G GK++L++M D +I L+GE Sbjct: 131 RRPIAEPLITGIRAIDGLLTCGVGQRIGIFAAAGCGKTSLMNMLVTHCEADVYVIGLIGE 190 Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 R REV EF+E L K ++V ATSD S + R A A +IA YFS G VLL + Sbjct: 191 RVREVTEFVESMKLSSRRAKVILVYATSDRSSVERTNAAQVASSIAGYFSELGKKVLLFI 250 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TR+A ++R++A + GELP RGYP SVF LP+LLER P G+ITA +VL++ Sbjct: 251 DSVTRYARALRDVALSMGELPARRGYPASVFESLPKLLER--PGCFITGSITAFYTVLIE 308 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 + D I D VRSILDGHI L+ LA +G YP +D L S+SR+ + ++L Sbjct: 309 NEEEADVIGDEVRSILDGHIYLSHKLAAKGHYPAIDILQSISRVFSSVTDDNHQQLAKVF 368 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 L+ R E + +G YR G ++ D A + I FL+Q Sbjct: 369 RSLLQRKSEMQLYIDLGEYRYGENVDNDIAFDKAGDIELFLRQ 411 >gi|16752181|ref|NP_445548.1| type III secretion system ATPase [Chlamydophila pneumoniae AR39] gi|7189925|gb|AAF38789.1| virulence ATPase, putative [Chlamydophila pneumoniae AR39] Length = 433 Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 149/422 (35%), Positives = 218/422 (51%), Gaps = 21/422 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S ++ V LS CLG+ + K+ + L +VI + + + ++ Sbjct: 21 GLLSKVSGNLIEVDGLS--ACLGELCKISSTKDPNLLAEVIGFHNHTTLLMSLSPLHSVA 78 Query: 83 LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 LG V R + S GRV++A G PID + L K ++S P M RQ + Sbjct: 79 LGTEVLPLRRPPSLHLSDHLLGRVLDAFGNPIDKKEDLPKTH-RKPLLSLPPSPMMRQPI 137 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++ F TGI+ ID F L GQRIGVF+ G GKS+LLS A +I+L+GERGRE Sbjct: 138 DQIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIALGSKSTINVIALIGERGRE 197 Query: 202 VREFIEDYLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 VRE IE + + LK +++++ A + E+ + +A A+TIAEYF +G VL I+DS+ Sbjct: 198 VREHIEKH-SNALKQQRTIIIAAPAHETAPTKVIAGRAAMTIAEYFREQGHEVLFIMDSL 256 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 +R+ +++E+A GE A Y SVF + ER G +KG+ITA+ ++L Sbjct: 257 SRWIAALQEVALARGETLSAHQYAASVFHHVSEFTERAG--NNDKGSITALYAILY-YPK 313 Query: 320 HNDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 H D D ++S+LDGH L ++LA PP+D L+S+SR A L Sbjct: 314 HPDIFTDYLKSLLDGHFFLTSQGKALAS----PPIDILSSLSRSAQALALPHHYAAAERL 369 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436 L+ + E DI +G Y PG D LDKAV +P I FL Q LSS K+ Sbjct: 370 RSLLKVYNEALDIIHLGAYTPGQDEELDKAVKLLPSIKAFLAQP---LSSYCYLDNTLKQ 426 Query: 437 LQ 438 L+ Sbjct: 427 LE 428 >gi|313056267|dbj|BAJ39851.1| probable ATP synthase VscN2 [Vibrio mimicus] Length = 420 Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 123/356 (34%), Positives = 203/356 (57%), Gaps = 17/356 (4%) Query: 91 GRFRISP--------SACWCGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140 G+ I+P + G+VIN G+ + GD LG+ G+ + + I + P R Sbjct: 66 GKVEITPRRFCFPLNESALVGKVINCYGETLYGDSYLGQPGEFIDLPIAVEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + ++KS+ +V+TS+ +P+ + + L AV+IA Y+ +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIRKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA R A G P+ G P V L RL+E G S + G++T + +VL++ + Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIQ--GSVTGIFTVLIEKEI 299 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K +L + + Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKYYVRLSEKIKDM 359 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 ++R+ + +G Y G L D+A+ + P I +FLKQ + E+ QE+ + Sbjct: 360 VYRYFNVELLIRVGEYEKGNGLETDEAIERYPKIIEFLKQGFEGVEYEETLQEMER 415 >gi|12082754|gb|AAG48602.1|AF306649_3 SpaL/InvC [Sodalis glossinidius] Length = 437 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 118/285 (41%), Positives = 170/285 (59%), Gaps = 5/285 (1%) Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 R+ + + T IR ID HGQR+G+FA +G GK++L++M D ++ L+GE Sbjct: 135 REPIAEKLITRIRAIDGLLTCGHGQRLGIFAAAGCGKTSLMNMLIEHSEADVYVVGLIGE 194 Query: 198 RGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 RGREV EF+E + K V+V ATSD + + R A L A T+AEYF +G V+L L Sbjct: 195 RGREVTEFVETLRHSPRRHKCVLVYATSDYASLERCNAALVATTVAEYFRDQGRRVVLFL 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 DS+TRFA ++R++A +GE P RGYP SVF LPR+LER P G+ITA +VL++ Sbjct: 255 DSLTRFARALRDVALAAGEAPARRGYPASVFDALPRVLER--PGNSLSGSITAFYTVLLE 312 Query: 317 GDNHNDPIADSVRSIL--DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 GD+ DP A + DGHI L+R L+ YP +D L S SR+A + A ++ L Sbjct: 313 GDDEPDPDAPDENPLRFSDGHIYLSRKLSAASHYPAIDILHSASRVAGQVTDARQQALAG 372 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 ++ L+ R EE + + +G YR G + D+A Q ++DFL+Q Sbjct: 373 AMRGLLTRLEEMQTLIDLGEYRLGDNAENDRAHAQKQALWDFLRQ 417 >gi|262274286|ref|ZP_06052097.1| Type III secretion cytoplasmic ATP synthase [Grimontia hollisae CIP 101886] gi|262220849|gb|EEY72163.1| Type III secretion cytoplasmic ATP synthase [Grimontia hollisae CIP 101886] Length = 420 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 125/356 (35%), Positives = 203/356 (57%), Gaps = 17/356 (4%) Query: 91 GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140 G+ I+P C+ G+VIN G+ + GD L + G+ + + I + P R Sbjct: 66 GKVEITPRRFCFPLNEEALVGKVINCYGESLYGDSYLEQPGEFIDLPIAVEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + +KKS+ +V+TS+ +P+ + + L AV+IA Y+ +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIKKSITIVSTSEANPLEKVRSGLVAVSIARYYMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA R A G P+ G P V L RL+E G S + G++T + +VL++ + Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIR--GSVTGIFTVLIEREI 299 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K +L + + Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQDKHYVRLSEKIKDM 359 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 ++R+ + +G Y G DL D+A+ P I +FLKQ + E+ QE+ + Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIELYPKIMEFLKQGFEGVEYEETLQEMER 415 >gi|262361808|gb|ACY58529.1| flagellum-specific ATP synthase [Yersinia pestis D106004] Length = 247 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 108/233 (46%), Positives = 145/233 (62%), Gaps = 1/233 (0%) Query: 197 ERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 ERGREV++FIE+ LG + +SVV+ A +D SP+LR A IAE F +G +VLLI Sbjct: 3 ERGREVKDFIENILGAEGRARSVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLI 62 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +DS+TR+A + REIA GE P +GYP SVF++LP L+ER G G+ITA +VL Sbjct: 63 MDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVLT 122 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 +GD+ DPIADS R+ILDGH+VL+R LAE G YP +D AS+SR D V Sbjct: 123 EGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVRQ 182 Query: 376 LTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 L+ ++ RD+ +G Y G D +LDKA+ P + FL+Q + SS D Sbjct: 183 FKQLLASYQRNRDLISVGAYAAGSDPLLDKAIALYPQMEAFLQQGMFERSSFD 235 >gi|229515150|ref|ZP_04404610.1| Type III secretion cytoplasmic ATP synthase [Vibrio cholerae TMA 21] gi|229529212|ref|ZP_04418602.1| Type III secretion cytoplasmic ATP synthase [Vibrio cholerae 12129(1)] gi|254224923|ref|ZP_04918538.1| Flagellar biosynthesis/type III secretory pathway ATPase [Vibrio cholerae V51] gi|254285295|ref|ZP_04960260.1| Flagellar biosynthesis/type III secretory pathway ATPase [Vibrio cholerae AM-19226] gi|71480607|gb|AAZ32229.1| VcsN2 [Vibrio cholerae non-O1/non-O139] gi|125622611|gb|EAZ50930.1| Flagellar biosynthesis/type III secretory pathway ATPase [Vibrio cholerae V51] gi|150424567|gb|EDN16503.1| Flagellar biosynthesis/type III secretory pathway ATPase [Vibrio cholerae AM-19226] gi|229332986|gb|EEN98472.1| Type III secretion cytoplasmic ATP synthase [Vibrio cholerae 12129(1)] gi|229347855|gb|EEO12814.1| Type III secretion cytoplasmic ATP synthase [Vibrio cholerae TMA 21] Length = 420 Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 125/356 (35%), Positives = 203/356 (57%), Gaps = 17/356 (4%) Query: 91 GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GD-LSMEIMSKVPPAMNRQR 140 G+ I+P C+ G+VIN G+ + GD L + G+ + + I + P R Sbjct: 66 GKVEITPRRFCFPLNEEALVGKVINCYGETLYGDSYLEQPGEFIDLPIAVEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + +KKS+ +V+TS+ +P+ + + L AV+IA ++ +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIKKSITIVSTSEANPLEKVRSGLVAVSIARHYMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA R A G P+ G P V L RL+E G S K G++T + +VL++ + Sbjct: 246 TRFA---RAQAMLDG-TPIKGGIPIGVSLALSRLVESCGNSIK--GSVTGIFTVLIEKEI 299 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K +L + + Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIAATGRYPAIDVLKSKSRLQNKVQEKRYVRLSEKIKDM 359 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 ++R+ + +G Y G DL D+A+ P I +FLKQ + E+ QE+ + Sbjct: 360 VYRYFNVELLIRVGEYEKGNDLETDEAIELYPKIIEFLKQGFEGVEYEETLQEMER 415 >gi|15836391|ref|NP_300915.1| type III secretion system ATPase [Chlamydophila pneumoniae J138] gi|8979232|dbj|BAA99066.1| flagellum-specific ATP synthase [Chlamydophila pneumoniae J138] Length = 433 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 148/422 (35%), Positives = 217/422 (51%), Gaps = 21/422 (4%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEIS 82 G +S ++ V LS CLG+ + K+ + L +VI + + + ++ Sbjct: 21 GLLSKVSGNLIEVDGLS--ACLGELCKISSTKDPNLLAEVIGFHNHTTLLMSLSPLHSVA 78 Query: 83 LGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 LG V R + S GRV++A G PID + L K ++S P M RQ + Sbjct: 79 LGTEVLPLRRPPSLHLSDHLLGRVLDAFGNPIDKKEDLPKTH-RKPLLSLPPSPMMRQPI 137 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201 ++ F TGI+ ID F L GQRIGVF+ G GKS+LLS A +I+L+GER RE Sbjct: 138 DQIFPTGIKAIDAFLTLGKGQRIGVFSEPGSGKSSLLSAIALGSKSTINVIALIGERRRE 197 Query: 202 VREFIEDYLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 VRE IE + + LK +++++ A + E+ + +A A+TIAEYF +G VL I+DS+ Sbjct: 198 VREHIEKH-SNALKQQRTIIIAAPAHETAPTKVIAGRAAMTIAEYFREQGHEVLFIMDSL 256 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 +R+ +++E+A GE A Y SVF + ER G +KG+ITA+ ++L Sbjct: 257 SRWIAALQEVALARGETLSAHQYAASVFHHVSEFTERAG--NNDKGSITALYAILY-YPK 313 Query: 320 HNDPIADSVRSILDGHIVLN---RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 H D D ++S+LDGH L ++LA PP+D L+S+SR A L Sbjct: 314 HPDIFTDYLKSLLDGHFFLTSQGKALAS----PPIDILSSLSRSAQALALPHHYAAAERL 369 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKK 436 L+ + E DI +G Y PG D LDKAV +P I FL Q LSS K+ Sbjct: 370 RSLLKVYNEALDIIHLGAYTPGQDEELDKAVKLLPSIKAFLAQP---LSSYCYLDNTLKQ 426 Query: 437 LQ 438 L+ Sbjct: 427 LE 428 >gi|153212061|ref|ZP_01947878.1| probable ATP synthase YscN [Vibrio cholerae 1587] gi|153827956|ref|ZP_01980623.1| probable ATP synthase YscN [Vibrio cholerae 623-39] gi|124116857|gb|EAY35677.1| probable ATP synthase YscN [Vibrio cholerae 1587] gi|148876537|gb|EDL74672.1| probable ATP synthase YscN [Vibrio cholerae 623-39] Length = 420 Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 124/355 (34%), Positives = 199/355 (56%), Gaps = 23/355 (6%) Query: 91 GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQR 140 G+ I+P C+ G+VIN G+ + G+ L + GD + I + P R Sbjct: 66 GKVEITPRRFCFPLNEEALVGKVINCYGESLYGESYLEQEGDYKDLPIALEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + ++KS+ +V+TS+ +P+ + + L AV+IA YF +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIQKSITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGEL---PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 TRFA + G L P+ G P V L RL+E G S G++T + +VL++ Sbjct: 246 TRFARA-------QGMLDGTPIQGGIPIGVSLALSRLVESCGNSIS--GSVTGIFTVLIE 296 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 + +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K + +L + Sbjct: 297 KEIDDDPIAHEVKSLIDGHLVYSTTIASTGRYPAIDVLKSKSRLQNKIQDKEYVRLSERI 356 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431 ++HR+ + +G Y G DL D+A+ P I DFLKQ + E+ + Sbjct: 357 KDMVHRYFSVELLIRVGEYEKGNDLETDQAIELYPKIMDFLKQGFDGVEYEETLK 411 >gi|304412102|ref|ZP_07393712.1| H+transporting two-sector ATPase alpha/beta subunit central region [Shewanella baltica OS183] gi|307305997|ref|ZP_07585743.1| H+transporting two-sector ATPase alpha/beta subunit central region [Shewanella baltica BA175] gi|304349652|gb|EFM14060.1| H+transporting two-sector ATPase alpha/beta subunit central region [Shewanella baltica OS183] gi|306911490|gb|EFN41916.1| H+transporting two-sector ATPase alpha/beta subunit central region [Shewanella baltica BA175] Length = 420 Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 120/336 (35%), Positives = 194/336 (57%), Gaps = 9/336 (2%) Query: 103 GRVINALGKPIDGDDSLG-KGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G+VIN G+ + G+ LG +GD + I+ K P R ++ F T I++ID + Sbjct: 86 GKVINCYGESLYGEQYLGCEGDYYDLPIIDKPIPLNIRAPIDTVFPTKIKIIDGLFTIGV 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 GQR+G+FA +G GK+T +S+ A + D VI +++GER REV EF+E +G ++KS+ Sbjct: 146 GQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAREVVEFLEGEIGPAVIQKSIT 205 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 +V+TS+ +P+ + + L AV+IA ++ ++G V+L DS+TRFA R A G P+ Sbjct: 206 IVSTSEANPLEKVRSGLVAVSIARHYMAQGKKVVLYFDSLTRFA---RAQAMLDGT-PIE 261 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 G P V L RL+E G S G++T + +VL++ + DPIA V+S++DGH+V + Sbjct: 262 GGIPIGVSLALSRLVENCGNSIH--GSVTGIFTVLIEKEIDEDPIAHEVKSLIDGHLVYS 319 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 ++A GRYP +D L S SRL +K + L +++R+ + +G Y G Sbjct: 320 TTIASTGRYPAIDVLKSKSRLQNKVQDSQYVSLSEKFKDMVYRYFNVELLIRVGEYEKGN 379 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 DL D+A+ + P I +FLKQ + E+ Q + + Sbjct: 380 DLATDEAIDRFPYIMEFLKQGYDGVEYEETLQAMDR 415 >gi|221271461|dbj|BAH15013.1| probable ATP synthase VscN2 [Vibrio parahaemolyticus] Length = 420 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 123/352 (34%), Positives = 200/352 (56%), Gaps = 17/352 (4%) Query: 91 GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQR 140 G+ I+P C+ G+VIN G+ + G+ L + G+ + I + P R Sbjct: 66 GKVEITPRRFCFPLNEEALVGKVINCYGESLYGESYLEQEGNYKDLPIALEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E+ F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IERVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + ++KS+ +V+TS+ +P+ + + L AV+IA YF +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIQKSITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA R A G P+ G P V L RL+E G S G++T + +VL++ + Sbjct: 246 TRFA---RAQAMLDG-TPIQGGIPIGVSLALSRLVESCGNSIS--GSVTGIFTVLIEKEI 299 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K + +L + + Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIASTGRYPAIDVLKSKSRLQNKIQDKEYVRLSERIKDM 359 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431 +HR+ + +G Y G DL D+A+ P I +FLKQ + E+ + Sbjct: 360 VHRYFSVELLIRVGEYEKGNDLETDEAIELYPKIMEFLKQGFDGVEYEETLK 411 >gi|255521226|ref|ZP_05388463.1| flagellum-specific ATP synthase [Listeria monocytogenes FSL J1-175] Length = 345 Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 132/333 (39%), Positives = 193/333 (57%), Gaps = 15/333 (4%) Query: 17 KNLV--VQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICP 74 KN V +Q G I ++ Y V +GD V+ G+N L +VI I + + P Sbjct: 14 KNTVPYIQKGKIHTVQEQVYI--SKGPQVKIGDTVM-VGENK-VLCEVISIEKENNMLLP 69 Query: 75 VGIGEEISLGDLVFHW-GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 ++++ GD V+ + I G+V+NA G ++ + + K M + + P Sbjct: 70 FNQSDKVAYGDWVYVTDTKITIPADEYLLGKVLNASGDILNEEAGVAKFKQKMPL--EAP 127 Query: 134 P--AMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 P A +R + +TGI+ ID + GQ+IG+FAGSG+GKSTLL M AR+ D + Sbjct: 128 PIHAFSRAEITDTLETGIKAIDGMLTIGIGQKIGIFAGSGVGKSTLLGMIARNAKADINV 187 Query: 192 ISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 I LVGERGREV++F+ LG D L+KSV+V ATSDES +++ A A +IAE+F +G Sbjct: 188 IGLVGERGREVKDFLRKDLGEDGLRKSVIVAATSDESHLMQLRAAKLATSIAEHFRDQGK 247 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 VLL++DS+TRFA + R + +LP+ G + S + +LLER G + + G+IT + Sbjct: 248 TVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSGKT--QNGSITGI 304 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 +VLVDGD+ N P+ D R ILDGHIVL R LA Sbjct: 305 YTVLVDGDDMNGPVPDLARGILDGHIVLTRELA 337 >gi|260899864|ref|ZP_05908259.1| type III secretion ATP synthase HrcN [Vibrio parahaemolyticus AQ4037] gi|308107305|gb|EFO44845.1| type III secretion ATP synthase HrcN [Vibrio parahaemolyticus AQ4037] Length = 420 Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 123/356 (34%), Positives = 201/356 (56%), Gaps = 17/356 (4%) Query: 91 GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQR 140 G+ I+P C+ G+VIN G+ + G+ L + G+ + I + P R Sbjct: 66 GKVEITPRRFCFPLNEEALVGKVINCYGESLYGESYLEQEGNYKDLPIALEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + ++KS+ +V+TS+ +P+ + + L AV+IA YF +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIQKSITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA R A G P+ G P V L RL+E G S G++T + +VL++ + Sbjct: 246 TRFA---RAQAMLDG-TPIHGGIPIGVSLALSRLVESCGNSIS--GSVTGIFTVLIEKEI 299 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K + +L + + Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIASTGRYPAIDVLKSKSRLQNKIQDKEYVRLSERIKDM 359 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEITK 435 +HR+ + +G Y G DL D+A+ P I +FLKQ + E+ + + + Sbjct: 360 VHRYFSVELLIRVGEYEKGNDLETDEAIELYPKIMEFLKQGFDGVEYEETLKRMER 415 >gi|313056237|dbj|BAJ39836.1| probable ATP synthase VscN2 [Vibrio mimicus] Length = 420 Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 123/352 (34%), Positives = 199/352 (56%), Gaps = 17/352 (4%) Query: 91 GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQR 140 G+ I+P C+ G+VIN G+ + G+ L + G+ + I + P R Sbjct: 66 GKVEITPRRFCFPLNEEALVGKVINCYGESLYGESYLEQEGNYKDLPIALEPIPLQMRAP 125 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGR 200 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER R Sbjct: 126 IETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGERAR 185 Query: 201 EVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 EV EF+E +G + ++KS+ +V+TS+ +P+ + + L AV+IA YF +G V+L DS+ Sbjct: 186 EVVEFLEGEIGPEVIQKSITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVLYFDSL 245 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 TRFA R A G P+ G P V L RL+E G S G++T + +VL++ + Sbjct: 246 TRFA---RAQAMLDG-TPIQGGIPIGVSLALSRLVESCGNSIS--GSVTGIFTVLIEKEI 299 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL 379 +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K + +L + + Sbjct: 300 DDDPIAHEVKSLIDGHLVYSTTIASTGRYPAIDVLKSKSRLQNKIQDKEYVRLSERIKDM 359 Query: 380 IHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431 +HR+ + +G Y G DL D+A+ P I +FLKQ + E+ + Sbjct: 360 VHRYFSVELLIRVGEYEKGNDLETDEAIELYPKIMEFLKQGFDGVEYEETLK 411 >gi|285018279|ref|YP_003375990.1| xanthomonas secretion apparatus protein [Xanthomonas albilineans GPE PC73] gi|283473497|emb|CBA16000.1| probable xanthomonas secretion apparatus protein [Xanthomonas albilineans] Length = 449 Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 117/294 (39%), Positives = 169/294 (57%), Gaps = 3/294 (1%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 P +R + TGIR ID GQR+G+FA +G GKS+LLSM D I+ Sbjct: 145 PRYTDRNPHAESLWTGIRAIDGLLTCAIGQRVGIFAAAGSGKSSLLSMLVGGIDADVAIV 204 Query: 193 SLVGERGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFSSKGDN 251 +L+GERGREV EF+E ++VV ATSD+S + R A A+ AE++ +G + Sbjct: 205 ALIGERGREVSEFVEKMRHSQRADQLIVVYATSDQSAVERANAAKVAMAAAEFYRDRGMH 264 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 V++ LDS+TR+A + R+IA SGE+PV RGYP SVF LP+L+ER G G+ITA Sbjct: 265 VVVYLDSLTRYARAERDIALASGEVPVKRGYPLSVFDRLPKLIERAG--RIHVGSITAFY 322 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +VL++ + D +AD RS+LDGHI L+R LAE YP +D L S SRL + ++ Sbjct: 323 TVLLESEEEADMVADEFRSLLDGHIYLSRGLAETHHYPSIDVLKSASRLFNAVTDEQQQM 382 Query: 372 LVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + ++ + R++E + +G Y+ G + D+ V + FL Q S S Sbjct: 383 MAAAFRKQLARYQELQVYIDMGEYQRGTNAENDRIVDGYAQMRQFLIQDQSRWS 436 >gi|328469623|gb|EGF40559.1| putative ATPase YscN [Vibrio parahaemolyticus 10329] Length = 420 Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 124/354 (35%), Positives = 200/354 (56%), Gaps = 21/354 (5%) Query: 91 GRFRISPSA-CW-------CGRVINALGKPIDGDDSLGK----GDLSMEIMSKVPPAMNR 138 G+ I+P C+ G+VIN G+ + G+ L + DL + + +P M R Sbjct: 66 GKVEITPRRFCFPLNEEALVGKVINCYGESLYGESYLEQEGHYKDLPIA-LEPIPLQM-R 123 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGER 198 +E F T +++ID + GQR+G+FA +G GK+T +S+ A + D VI +++GER Sbjct: 124 APIETVFPTKLKIIDGLFTIGEGQRLGLFAPAGAGKTTTVSIMANNMDADVVIFAMIGER 183 Query: 199 GREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILD 257 REV EF+E +G + ++KS+ +V+TS+ +P+ + + L AV+IA YF +G V+L D Sbjct: 184 AREVVEFLEGEIGPEVIQKSITIVSTSEANPLEKVRSGLVAVSIARYFMEQGKKVVLYFD 243 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 S+TRFA R A G P+ G P V L RL+E G S G++T + +VL++ Sbjct: 244 SLTRFA---RAQAMLDG-TPIQGGIPIGVSLALSRLVESCGNSIS--GSVTGIFTVLIEK 297 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 + +DPIA V+S++DGH+V + ++A GRYP +D L S SRL +K + +L + Sbjct: 298 EIDDDPIAHEVKSLIDGHLVYSTTIASTGRYPAIDVLKSKSRLQNKIQDKEYVRLSERIK 357 Query: 378 HLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQ 431 ++HR+ + +G Y G DL D+A+ P I +FLKQ + E+ + Sbjct: 358 DMVHRYFSVELLIRVGEYEKGNDLETDEAIELYPKIMEFLKQGFDGVEYEETLK 411 >gi|158834358|gb|ABW81978.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834360|gb|ABW81979.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834362|gb|ABW81980.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834364|gb|ABW81981.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834366|gb|ABW81982.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834370|gb|ABW81984.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834381|gb|ABW81986.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834389|gb|ABW81989.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] Length = 237 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 101/226 (44%), Positives = 144/226 (63%), Gaps = 3/226 (1%) Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVV 219 GQR+G+FA +G GK++L+ M D +I LVGERGREV EF E +K +V Sbjct: 12 GQRMGIFAAAGCGKTSLMHMLIEQADADVFVIGLVGERGREVTEFTEVLSKSGRAQKCIV 71 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATSD S + R A L A TIAEYF +G V+L LDSITR+A ++R++A +GE P Sbjct: 72 VYATSDFSSLDRCNAALLATTIAEYFRDQGKKVVLFLDSITRYARALRDVALAAGEAPAR 131 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF LP +LER PS + G+ITA ++L++ D+ DPIA+ +RSILDGHI L+ Sbjct: 132 RGYPASVFDSLPSILER--PSNTKNGSITAFYTILLESDDEPDPIAEEIRSILDGHIYLS 189 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 + LA + YP +D L S+SR++ + + + +++ + +E Sbjct: 190 KKLAIKNHYPAIDVLHSISRVSSQICDTNHLSMAGEFRNILAKIQE 235 >gi|158834356|gb|ABW81977.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834368|gb|ABW81983.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834372|gb|ABW81985.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834383|gb|ABW81987.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] gi|158834385|gb|ABW81988.1| type III secretion system ATP synthase [Candidatus Hamiltonella defensa] Length = 237 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 100/226 (44%), Positives = 144/226 (63%), Gaps = 3/226 (1%) Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVV 219 GQR+G+FA +G GK++L+ M D +I LVGERGREV EF E +K +V Sbjct: 12 GQRMGIFAAAGCGKTSLMHMLIEQADADVFVIGLVGERGREVTEFTEVLSKSGRAQKCIV 71 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V ATSD S + R A L A TIAEYF +G V+L LDSITR+A ++R++A +GE P Sbjct: 72 VYATSDFSSLDRCNAALLATTIAEYFRDQGKKVVLFLDSITRYARALRDVALAAGEAPAR 131 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP SVF LP +LER PS + G+ITA ++L++ D+ DPI++ +RSILDGHI L+ Sbjct: 132 RGYPASVFDSLPSILER--PSNTKNGSITAFYTILLESDDEPDPISEEIRSILDGHIYLS 189 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 + LA + YP +D L S+SR++ + + + +++ + +E Sbjct: 190 KKLAIKNHYPAIDVLHSISRVSSQICDTNHLSMAGEFRNILAKIQE 235 >gi|315930203|gb|EFV09318.1| flagellum-specific ATP synthase [Campylobacter jejuni subsp. jejuni 305] Length = 309 Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 119/313 (38%), Positives = 177/313 (56%), Gaps = 12/313 (3%) Query: 4 NLETL-AQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGD---FVVHQGKNSDNL 59 NLE L ++L ++ NL G I+ I++ + L V GD V ++ +N + L Sbjct: 2 NLEKLRSKLGKE---NLSAIFGEITKISATSIEIRGLKTGV--GDIVKLVSNENENLNTL 56 Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVF-HWGRFRISPSACWCGRVINALGKPIDGDDS 118 V+ I Y+ P E +GD F +I S GRV++ +P DG + Sbjct: 57 AMVVEIKEQFSYLSPFSFIEGFKIGDRAFISDAGMQIGVSDELLGRVVDPFMRPKDGKGA 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 + + M IM AM R +E+ F G++ ID GQ++G+FAGSG+GKSTL+ Sbjct: 117 I-EATKYMPIMRAPIDAMKRGLIEEVFPVGVKTIDALLTCGVGQKLGIFAGSGVGKSTLM 175 Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 M ++ +++L+GERGRE+ EFI+ LG L +V++VATSD+S ++RK A Sbjct: 176 GMIVKNSKAPIKVVALIGERGREIPEFIQKNLGGKLDDTVIIVATSDDSALMRKYGAFCA 235 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +++AEYF +G +VL I+DS+TRFA + REI GE P +GYP SV S LP+L+ER G Sbjct: 236 MSVAEYFKEQGKDVLFIMDSVTRFAMAQREIGLALGEPPTTKGYPPSVLSLLPQLMERTG 295 Query: 299 PSEKEKGNITAVI 311 E+ KG ITA + Sbjct: 296 -KEEGKGTITAFL 307 >gi|15834715|ref|NP_296474.1| type III secretion system ATPase [Chlamydia muridarum Nigg] gi|270284881|ref|ZP_06194275.1| type III secretion system ATPase [Chlamydia muridarum Nigg] gi|270288909|ref|ZP_06195211.1| type III secretion system ATPase [Chlamydia muridarum Weiss] gi|7190124|gb|AAF38970.1| virulence ATPase, putative [Chlamydia muridarum Nigg] Length = 434 Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 135/387 (34%), Positives = 206/387 (53%), Gaps = 10/387 (2%) Query: 43 VCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SAC 100 CLG+ + ++S L +VI I+ + + +SLG V R P S Sbjct: 38 ACLGELCQISLPRSSPILAEVIGIHNQTTLLLALTPIYSLSLGAEVVPLRRPASLPLSHH 97 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRVI+ G P+DG+ L K LS M+R +++ F TGIR ID + Sbjct: 98 LLGRVIDGFGNPLDGNPPLPKSHLSPLFSPPPS-PMSRTPIQEIFPTGIRAIDALLTIGE 156 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVV 219 GQR+G+F+ G GKS+LLS A+ +I+L+GERGREVR+++ + G +++++ Sbjct: 157 GQRVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTII 216 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VV+T+ E+ + +A A+TIAEYF +G VL I+DS++R+ S++E+A GE Sbjct: 217 VVSTAHETAASKVIAGRAAITIAEYFRDQGARVLFIMDSLSRWIESLQEVALARGETLST 276 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 Y SVF + LER G +KG+IT+ ++L NH D D V+S+LDGH L Sbjct: 277 HHYAASVFHHVSEFLERAG--NNDKGSITSFYAML-HYANHPDIFNDYVKSLLDGHFFL- 332 Query: 340 RSLAEEGRY-PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 S E+ + PP++ L S+SR A + L L+ + E DI +G Y G Sbjct: 333 -SPVEKSFFSPPINLLTSLSRSACQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSG 391 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLS 425 D LD+A+ +P + +FL Q S+ S Sbjct: 392 QDAKLDRAIRLLPSLREFLSQPLSNYS 418 >gi|213621349|ref|ZP_03374132.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 265 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 106/253 (41%), Positives = 152/253 (60%), Gaps = 3/253 (1%) Query: 177 LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAP 235 L+ M D +I L+GERGREV EF++ + K K V+V ATSD + R A Sbjct: 2 LMHMLIEQTEADVFVIGLIGERGREVTEFVDMLRASHKKEKCVLVFATSDFPSVDRCNAA 61 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 A T+AEYF +G V+L +DS+TR+A ++R++A SGE P RGYP SVF LPRLLE Sbjct: 62 QLATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLE 121 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 R P +G+ITA +VL++ + DP+AD +RSILDGH+ L+R LA +G YP +D L Sbjct: 122 R--PGATSEGSITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLK 179 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 SVSR+ + + + S++ L+ R EE + +G YRPG ++ D+A+ + Sbjct: 180 SVSRVFGQVTTPTHAEQASAVRKLMTRLEELQLFIDLGEYRPGENIDNDRAMQMRDSLKA 239 Query: 416 FLKQSPSDLSSED 428 +L Q + SS D Sbjct: 240 WLCQPVAQYSSFD 252 >gi|301631895|ref|XP_002945030.1| PREDICTED: flagellum-specific ATP synthase-like [Xenopus (Silurana) tropicalis] Length = 261 Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 102/240 (42%), Positives = 152/240 (63%), Gaps = 1/240 (0%) Query: 181 FARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAV 239 AR D +++ L+GERGREV+EF+ED LG + ++VVV A +D P+LR A Sbjct: 1 MARYTQADVIVVGLIGERGREVKEFVEDILGAGDRSRAVVVAAPADAPPLLRMQGAAYAT 60 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 IAE+F +G +VLL++DS+TR+A + REIA GE P +GYP S F++LP L+ER G Sbjct: 61 AIAEHFRDQGRHVLLLMDSLTRYAMAQREIALAIGEPPATKGYPPSCFAKLPALVERSGN 120 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 G+ITA +VL +GD+ DPIAD+ R+ILDGHIVL+R+LAE G +P +D S SR Sbjct: 121 GLNGVGSITAFYTVLSEGDDQQDPIADAARAILDGHIVLSRALAETGHFPAIDIEQSASR 180 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + + + ++ + R++++RD+ +G Y G D +D+A+ P + FL+Q Sbjct: 181 VMHNVVTREHFEMARQFRAIYSRYQKSRDLVQVGAYMSGSDPQVDEAIRLQPAMAGFLQQ 240 >gi|289525761|emb|CBJ15242.1| flagellum-specific ATP synthase [Chlamydia trachomatis Sweden2] gi|296435334|gb|ADH17512.1| type III secretion system ATPase [Chlamydia trachomatis E/150] gi|296439051|gb|ADH21204.1| type III secretion system ATPase [Chlamydia trachomatis E/11023] Length = 434 Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 116/326 (35%), Positives = 180/326 (55%), Gaps = 10/326 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G P+DG L K +LS S M+R +++ F TGIR ID + GQ Sbjct: 100 GRVLDGFGNPLDGGPQLPKTNLSPLFSSPPS-PMSRTPIQEVFPTGIRAIDALLTIGEGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221 R+G+F+ G GKS+LLS A+ +I+L+GERGREVR+++ + G +++V++ Sbjct: 159 RVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIA 218 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +T+ E+ + +A A+TIAEYF +G +VL +DS++R+ S++E+A GE Sbjct: 219 STAYETAASKVIAGRAAITIAEYFRDQGAHVLFTMDSLSRWIESLQEVAIARGETLSTHH 278 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF + LER G +KG+IT+ ++L NH D D V+S+LDGH L+ Sbjct: 279 YAASVFHHVAEFLERAG--NNDKGSITSFYAIL-HYANHPDIFTDYVKSLLDGHFFLS-- 333 Query: 342 LAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 +E + PP++ L S+SR + + L L+ + E DI +G Y G Sbjct: 334 -PQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQ 392 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLS 425 D LD+A+ +P + FL Q S S Sbjct: 393 DAHLDRAIRLLPAVKQFLSQPYSHYS 418 >gi|166154059|ref|YP_001654177.1| type III secretion system ATPase [Chlamydia trachomatis 434/Bu] gi|166154934|ref|YP_001653189.1| type III secretion system ATPase [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335261|ref|ZP_07223505.1| type III secretion system ATPase [Chlamydia trachomatis L2tet1] gi|165930047|emb|CAP03530.1| flagellum-specific ATP synthase [Chlamydia trachomatis 434/Bu] gi|165930922|emb|CAP06484.1| flagellum-specific ATP synthase [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 434 Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 116/327 (35%), Positives = 180/327 (55%), Gaps = 10/327 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G P+DG L K +LS S M+R +++ F TGIR ID + GQ Sbjct: 100 GRVLDGFGNPLDGGSQLPKTNLSPLFSSPSS-PMSRTPIQEVFPTGIRAIDALLTIGEGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221 R+G+F+ G GKS+LLS A+ +I+L+GERGREVR+++ + G +++V++ Sbjct: 159 RVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIA 218 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +T+ E+ + +A A+TIAEYF +G VL +DS++R+ S++E+A GE Sbjct: 219 STAYETAASKVIAGRAAITIAEYFRDQGARVLFTMDSLSRWIESLQEVAIARGETLSTHH 278 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF + LER G +KG+IT+ ++L NH D D V+S+LDGH L+ Sbjct: 279 YAASVFHHVAEFLERAG--NNDKGSITSFYAIL-HYANHPDIFTDYVKSLLDGHFFLS-- 333 Query: 342 LAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 +E + PP++ L S+SR + + L L+ + E DI +G Y G Sbjct: 334 -PQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQ 392 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426 D LD+A+ +P + FL Q S S+ Sbjct: 393 DAHLDRAIRLLPSVKQFLSQPYSHYSA 419 >gi|255349110|ref|ZP_05381117.1| type III secretion system ATPase [Chlamydia trachomatis 70] gi|255503647|ref|ZP_05382037.1| type III secretion system ATPase [Chlamydia trachomatis 70s] gi|255507326|ref|ZP_05382965.1| type III secretion system ATPase [Chlamydia trachomatis D(s)2923] Length = 434 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 116/326 (35%), Positives = 180/326 (55%), Gaps = 10/326 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G P+DG L K +LS S M+R +++ F TGIR ID + GQ Sbjct: 100 GRVLDGFGNPLDGGPQLPKTNLSPLFSSPPS-PMSRTPIQEVFPTGIRAIDALLTIGEGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221 R+G+F+ G GKS+LLS A+ +I+L+GERGREVR+++ + G +++V++ Sbjct: 159 RVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIA 218 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +T+ E+ + +A A+TIAEYF +G +VL +DS++R+ S++E+A GE Sbjct: 219 STAYETAASKVIAGRAAITIAEYFRDQGAHVLFTMDSLSRWIESLQEVAIARGETLSTHH 278 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF + LER G +KG+IT+ ++L NH D D V+S+LDGH L+ Sbjct: 279 YAASVFHHVAEFLERAG--NNDKGSITSFYAIL-HYANHPDIFTDYVKSLLDGHFFLS-- 333 Query: 342 LAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 +E + PP++ L S+SR + + L L+ + E DI +G Y G Sbjct: 334 -PQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQ 392 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLS 425 D LD+A+ +P + FL Q S S Sbjct: 393 DAHLDRAIRLLPSVKQFLSQPYSHYS 418 >gi|15605450|ref|NP_220236.1| type III secretion system ATPase [Chlamydia trachomatis D/UW-3/CX] gi|76789457|ref|YP_328543.1| type III secretion system ATPase [Chlamydia trachomatis A/HAR-13] gi|237805068|ref|YP_002889222.1| type III secretion system ATPase [Chlamydia trachomatis B/TZ1A828/OT] gi|255311547|ref|ZP_05354117.1| type III secretion system ATPase [Chlamydia trachomatis 6276] gi|255317848|ref|ZP_05359094.1| type III secretion system ATPase [Chlamydia trachomatis 6276s] gi|3329173|gb|AAC68312.1| Flagellum-specific ATP Synthase [Chlamydia trachomatis D/UW-3/CX] gi|76167987|gb|AAX50995.1| flagellum-specific ATP synthase [Chlamydia trachomatis A/HAR-13] gi|231273368|emb|CAX10283.1| flagellum-specific ATP synthase [Chlamydia trachomatis B/TZ1A828/OT] gi|296436262|gb|ADH18436.1| type III secretion system ATPase [Chlamydia trachomatis G/9768] gi|296437191|gb|ADH19361.1| type III secretion system ATPase [Chlamydia trachomatis G/11222] gi|296438122|gb|ADH20283.1| type III secretion system ATPase [Chlamydia trachomatis G/11074] gi|297140623|gb|ADH97381.1| type III secretion system ATPase [Chlamydia trachomatis G/9301] gi|297748848|gb|ADI51394.1| Flagellum-specific ATP synthase [Chlamydia trachomatis D-EC] gi|297749728|gb|ADI52406.1| Flagellum-specific ATP synthase [Chlamydia trachomatis D-LC] Length = 434 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 116/327 (35%), Positives = 180/327 (55%), Gaps = 10/327 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G P+DG L K +LS S M+R +++ F TGIR ID + GQ Sbjct: 100 GRVLDGFGNPLDGGPQLPKTNLSPLFSSPPS-PMSRTPIQEVFPTGIRAIDALLTIGEGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221 R+G+F+ G GKS+LLS A+ +I+L+GERGREVR+++ + G +++V++ Sbjct: 159 RVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIA 218 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +T+ E+ + +A A+TIAEYF +G VL +DS++R+ S++E+A GE Sbjct: 219 STAYETAASKVIAGRAAITIAEYFRDQGARVLFTMDSLSRWIESLQEVAIARGETLSTHH 278 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF + LER G +KG+IT+ ++L NH D D V+S+LDGH L+ Sbjct: 279 YAASVFHHVAEFLERAG--NNDKGSITSFYAIL-HYANHPDIFTDYVKSLLDGHFFLS-- 333 Query: 342 LAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 +E + PP++ L S+SR + + L L+ + E DI +G Y G Sbjct: 334 -PQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQ 392 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426 D LD+A+ +P + FL Q S S+ Sbjct: 393 DAHLDRAIRLLPSVKQFLSQPYSHYSA 419 >gi|218506624|ref|ZP_03504502.1| type III secretion system ATP synthase protein [Rhizobium etli Brasil 5] Length = 260 Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 99/231 (42%), Positives = 145/231 (62%), Gaps = 3/231 (1%) Query: 188 DKVIISLVGERGREVREFIEDYLGDNLKKSV-VVVATSDESPILRKMAPLTAVTIAEYFS 246 D ++ +LVGERGREV EF+ + + + +V +VVATSD + R A +TA IAEYF Sbjct: 10 DVIVCALVGERGREVGEFVAGNMPEGVPSNVALVVATSDRPALERFKAVMTATAIAEYFR 69 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G +VLL++DS+TR A ++RE+ +GE PV RG+P SVF+ LP++ ER G S G Sbjct: 70 EQGKHVLLVIDSVTRMARALREVGLAAGEPPVRRGFPPSVFAVLPQIFERAGNS--ANGM 127 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 +TA +VLV+G+ +DPIA+ RS+LDGHIVL+ +A G +P +D LAS SR S Sbjct: 128 MTAFYTVLVEGEEQDDPIAEETRSLLDGHIVLSDKIARAGNFPAIDVLASRSRTMSAVVS 187 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 ++ L L+ ++E + +G YR G D +D+AV + +I FL Sbjct: 188 ESHRQAADRLRALLALYDEVELLIRVGEYRQGRDAAVDEAVAKHGLIQRFL 238 >gi|237803147|ref|YP_002888341.1| type III secretion system ATPase [Chlamydia trachomatis B/Jali20/OT] gi|231274381|emb|CAX11176.1| flagellum-specific ATP synthase [Chlamydia trachomatis B/Jali20/OT] Length = 434 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 115/327 (35%), Positives = 179/327 (54%), Gaps = 10/327 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ G P+DG L K +LS S M+R +++ F TGIR ID + GQ Sbjct: 100 GRVLDGFGNPLDGGPQLPKTNLSPLFSSPPS-PMSRTPIQEVFPTGIRAIDALLTIGEGQ 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVV 221 R+G+F+ G GKS+LLS A+ +I+L+GERGREVR+++ + G +++V++ Sbjct: 159 RVGIFSEPGGGKSSLLSTIAKGSQQTINVIALIGERGREVRDYVNQHKEGLAAQRTVIIA 218 Query: 222 ATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 +T+ E+ + +A A+TIAEYF +G VL +DS++R+ S++E+A GE Sbjct: 219 STAYETAASKVIAGRAAITIAEYFRDQGARVLFTMDSLSRWIESLQEVAIARGETLSTHH 278 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y SVF + LER G +KG+IT+ ++L NH D D V+S+LDGH L+ Sbjct: 279 YAASVFHHVAEFLERAG--NNDKGSITSFYAIL-HYANHPDIFTDYVKSLLDGHFFLS-- 333 Query: 342 LAEEGRY--PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGV 399 +E + PP++ L S+SR + + L L+ + E DI +G Y G Sbjct: 334 -PQEKSFSSPPINVLTSLSRSSRQLALPHHYAAAQELLSLLKAYHEAIDIIQLGAYVSGQ 392 Query: 400 DLILDKAVHQVPIIYDFLKQSPSDLSS 426 D LD+A+ + + FL Q S S+ Sbjct: 393 DAHLDRAIRLLSSVKQFLSQPYSHYSA 419 >gi|330443919|ref|YP_004376905.1| flagellum-specific ATP synthase [Chlamydophila pecorum E58] gi|328807029|gb|AEB41202.1| flagellum-specific ATP synthase [Chlamydophila pecorum E58] Length = 433 Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 137/391 (35%), Positives = 209/391 (53%), Gaps = 10/391 (2%) Query: 43 VCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSAC 100 CLG+ + ++S+ L +VI + + + ++LG V R + S Sbjct: 38 ACLGELCKISSTQSSELLAEVIGFHNQTTLLMSLSPLYGVALGTEVLPLRRPPSLHLSDH 97 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++ LG PID L K ++S PP M R+ + + F TGI+ ID L Sbjct: 98 LLGRVLDGLGNPIDNQKDLPKTH-RKPLISPPPPPMTRKPIHEVFPTGIKAIDACLTLGK 156 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK--SV 218 GQRIGVF+ G GKS+LLS A +I+L+GERGREVRE+IE + + LKK +V Sbjct: 157 GQRIGVFSEPGSGKSSLLSSIALGSKSTINVIALIGERGREVREYIERH-KEALKKHQTV 215 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V A + E+ ++ +A A+TIAE+F +G +VL I+DS++R+ +++E+A GE Sbjct: 216 IVTAPAHETAPIKIIAGRVAMTIAEFFREQGHDVLFIMDSLSRWISALQEVALARGETLS 275 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 + Y SVF + ER G S ++G+ITA++++L D H D D ++S+LDGH L Sbjct: 276 SHHYAASVFHHVSEFTERSGNS--DQGSITALLAILHYPD-HPDVFTDYLKSLLDGHFFL 332 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 + PP+D L+S+SR A L L+ + E DI +G Y PG Sbjct: 333 SNQ-GHAFTSPPIDILSSLSRSAQSLSLPHHYAAAEKLRSLLKVYNEALDIIRLGAYTPG 391 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSEDV 429 D LD+A+ +P I FL Q ++ + D Sbjct: 392 QDKDLDEAMKLIPSIQAFLSQPLTNYCNFDT 422 >gi|301382894|ref|ZP_07231312.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tomato Max13] Length = 215 Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 89/191 (46%), Positives = 121/191 (63%) Query: 230 LRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 +R A + IAEYF KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ Sbjct: 1 MRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFAR 60 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 LP+L+ER G +EK G+ITA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP Sbjct: 61 LPKLVERAGNAEKGGGSITAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYP 120 Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQ 409 +D AS+SR+ S + L R+++TRD+ +G Y G D D A+ Sbjct: 121 AIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIAL 180 Query: 410 VPIIYDFLKQS 420 P++ + +Q+ Sbjct: 181 HPVLVRYQRQA 191 >gi|257487959|ref|ZP_05642000.1| type III secretion component, putative [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 221 Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 99/208 (47%), Positives = 128/208 (61%), Gaps = 2/208 (0%) Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 VVATSD R A A T+AEY +G NVLL++DS+TRFA + REI GE P Sbjct: 3 AVVATSDRPAAERVRAAYVATTLAEYHRDQGRNVLLLMDSLTRFARAQREIGLAVGEPPT 62 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGYP S FS LPRLLER GP + G+ITA+ +VL +GD DP+A+ RSILDGHIVL Sbjct: 63 RRGYPPSFFSALPRLLERAGPGPQ--GSITALYTVLTEGDAAMDPVAEETRSILDGHIVL 120 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 + LA+ +P +D L S SRL D +A+ ++L S L LI R +E + +G Y G Sbjct: 121 SAELAQRDHFPAIDVLRSRSRLMDHIATAEHRQLASRLRELIARRQEIELLIQVGEYAAG 180 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSS 426 D I D+A+ + I FL+Q PS+ S Sbjct: 181 SDPIADEAIARHSPIEAFLRQPPSEHDS 208 >gi|313624679|gb|EFR94637.1| flagellum-specific ATP synthase [Listeria innocua FSL J1-023] Length = 268 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 111/270 (41%), Positives = 158/270 (58%), Gaps = 9/270 (3%) Query: 170 SGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228 SG+GKSTLL M AR+ D II LVGERGREV++F+ LG+ L+KSV+V ATSDES Sbjct: 1 SGVGKSTLLGMIARNAKADINIIGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESH 60 Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 +++ A A +IAE+F +G VLL++DS+TRFA + R + +LP+ G + S Sbjct: 61 LMQLRAAKLATSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMES 119 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 + +LLER G ++ G+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA + Y Sbjct: 120 YMKKLLERSGKTKN--GSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHY 177 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAV 407 P +D L SVSR+ ++ + K S + + ++E +G D + + Sbjct: 178 PAIDVLGSVSRVMEEIVPESQWKSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSK 237 Query: 408 HQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 + I+ FLKQ L E V E T K+ Sbjct: 238 EKSYFIHQFLKQ----LRDESVTLEETSKM 263 >gi|295110896|emb|CBL27646.1| ATPase FliI/YscN family [Synergistetes bacterium SGP1] Length = 325 Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 105/233 (45%), Positives = 137/233 (58%), Gaps = 3/233 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL 119 +V+ D V + P+G +E+ G D+V + GRV++ LG+PID + Sbjct: 68 EVVGFREDRVLLMPLGNLQEVGPGCDVVSTNRPLEVPVGPALLGRVLDGLGQPIDDRGPV 127 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D + + P + RQ V++ G+RVID L GQRIG+FAGSG+GKSTLL Sbjct: 128 IAKDF-YPLHAMPPHPLKRQMVDRPLSVGVRVIDGMLTLGMGQRIGIFAGSGVGKSTLLG 186 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 M AR D +ISLVGERGREVREFIE LG + +SV+VVATSD+ P++R A +TA Sbjct: 187 MMARYTTADVNVISLVGERGREVREFIERDLGPEGAARSVLVVATSDQPPLIRLKAAMTA 246 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 IAEYF G NVLL++DS+TR A + REI GE P RGY S P Sbjct: 247 TAIAEYFRDAGRNVLLMMDSVTRVARAQREIGLAIGEPPATRGYTPPCSSCCP 299 >gi|300853451|ref|YP_003778435.1| F1Fo ATPase subunit beta [Clostridium ljungdahlii DSM 13528] gi|300433566|gb|ADK13333.1| F1Fo ATPase, subunit beta [Clostridium ljungdahlii DSM 13528] Length = 464 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 107/298 (35%), Positives = 168/298 (56%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PID + + K + I + P ++ + F+TGI+VID+ P G Sbjct: 86 LGRLFNMLGQPIDENGEV-KAEQYYPIHRQAPSFEDQSVKPEMFETGIKVIDLLAPYQRG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E +KK+ Sbjct: 145 GKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMQESGVIKKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ G +P Sbjct: 205 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALLGRIP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPSTTFTHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+RS++E G YP VDPLAS SR+ D + D K+ S + H++ R+ E +DI I G Sbjct: 323 LSRSISEIGIYPAVDPLASTSRILDPRIVGEDHYKVASDVKHILERYSELQDIIAILG 380 >gi|217966570|ref|YP_002352076.1| ATP synthase F1 subunit beta [Dictyoglomus turgidum DSM 6724] gi|226740191|sp|B8DYT0|ATPB_DICTD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|217335669|gb|ACK41462.1| ATP synthase F1, beta subunit [Dictyoglomus turgidum DSM 6724] Length = 465 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 111/297 (37%), Positives = 173/297 (58%), Gaps = 16/297 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF---KTGIRVIDIFTPL 158 GRV+N G+PIDG D + KG+++ I + A+ +RVE + +TGI+ ID+ TP Sbjct: 85 LGRVVNVFGEPIDGGDKI-KGEMTPIIKN----AVEFRRVEPSYSILETGIKAIDLLTPF 139 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + IS+ +GER RE E ++E L Sbjct: 140 PQGGKIGLFGGAGVGKTVLIMELIHNVAVAHGGISVFAGIGERSREGNELWLEMKESGVL 199 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 K+V+V +E P +R PLTA+TIAEYF G +VLL++D+I R+ + E+++ Sbjct: 200 SKAVLVFGQMNEPPGVRMRVPLTALTIAEYFRDYLGKDVLLLMDNIFRYVQAGMEVSSML 259 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +EL + ERI + G+ITAV +V V D+ DP ++ S LD Sbjct: 260 GRIPSAVGYQPTLITELGEVEERI--LSTDTGSITAVQAVYVPADDLTDPAPATIFSHLD 317 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 +VL+RS+AE G YP VDPLAS S++ + + E V+ + ++ +E +DI Sbjct: 318 STLVLSRSIAEMGIYPAVDPLASSSQILEPKFVGYEHAEVARKVVEILQHYESLKDI 374 >gi|238924167|ref|YP_002937683.1| flagellar protein export ATPase FliI [Eubacterium rectale ATCC 33656] gi|238875842|gb|ACR75549.1| flagellar protein export ATPase FliI [Eubacterium rectale ATCC 33656] Length = 373 Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 91/219 (41%), Positives = 133/219 (60%), Gaps = 4/219 (1%) Query: 203 REFIEDYLGDNLKK--SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 RE I D L +K ++ V I + IAEYF KG++VLL++DS+T Sbjct: 137 REIISDVLPLGVKAVDGLITVGKGQRIGIFAGSGVGKSTLIAEYFRDKGEDVLLMMDSLT 196 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF+ + REI SGE PV RGYP SV+SE+P+LLER G ++K G+IT + +VLVDGD+ Sbjct: 197 RFSMAQREIGLASGEPPVTRGYPPSVYSEMPKLLERAGRADK--GSITGLYTVLVDGDDF 254 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380 N+PI D+ RSILDGHI+L+R L + YP +D L S+SR+ + + K L L +++ Sbjct: 255 NEPITDTARSILDGHIMLDRKLGHKNHYPAIDVLQSISRVMSAIATKEHKNLAGRLKNVL 314 Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + E D+ IG Y+ G + +D A+ ++ + FL Q Sbjct: 315 ATYTEAEDLINIGAYKNGSNQDIDYAIQKIGAVNSFLCQ 353 >gi|18311169|ref|NP_563103.1| F0F1 ATP synthase subunit beta [Clostridium perfringens str. 13] gi|110800751|ref|YP_696866.1| F0F1 ATP synthase subunit beta [Clostridium perfringens ATCC 13124] gi|168205576|ref|ZP_02631581.1| ATP synthase F1, beta subunit [Clostridium perfringens E str. JGS1987] gi|168210117|ref|ZP_02635742.1| ATP synthase F1, beta subunit [Clostridium perfringens B str. ATCC 3626] gi|168213709|ref|ZP_02639334.1| ATP synthase F1, beta subunit [Clostridium perfringens CPE str. F4969] gi|168215816|ref|ZP_02641441.1| ATP synthase F1, beta subunit [Clostridium perfringens NCTC 8239] gi|169344156|ref|ZP_02865138.1| ATP synthase F1, beta subunit [Clostridium perfringens C str. JGS1495] gi|182623961|ref|ZP_02951749.1| ATP synthase F1, beta subunit [Clostridium perfringens D str. JGS1721] gi|20137355|sp|Q8XID4|ATPB_CLOPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|123148561|sp|Q0TNC4|ATPB_CLOP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|18145852|dbj|BAB81893.1| ATP synthase beta subunit [Clostridium perfringens str. 13] gi|110675398|gb|ABG84385.1| ATP synthase F1, beta subunit [Clostridium perfringens ATCC 13124] gi|169297614|gb|EDS79714.1| ATP synthase F1, beta subunit [Clostridium perfringens C str. JGS1495] gi|170662906|gb|EDT15589.1| ATP synthase F1, beta subunit [Clostridium perfringens E str. JGS1987] gi|170711767|gb|EDT23949.1| ATP synthase F1, beta subunit [Clostridium perfringens B str. ATCC 3626] gi|170714819|gb|EDT27001.1| ATP synthase F1, beta subunit [Clostridium perfringens CPE str. F4969] gi|177910854|gb|EDT73208.1| ATP synthase F1, beta subunit [Clostridium perfringens D str. JGS1721] gi|182382316|gb|EDT79795.1| ATP synthase F1, beta subunit [Clostridium perfringens NCTC 8239] Length = 465 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 104/300 (34%), Positives = 164/300 (54%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 C GR+ N LGKP+D + + I P + V + F+TGI+VID+ P Sbjct: 86 CVLGRIFNVLGKPLDSGAEVNNEE-KYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQ 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + + +K Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYYEMMESGVIK 204 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF +G +VLL +D+I RF+ + E++ G Sbjct: 205 NTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 265 IPSAVGYQPTLATEMGALQERI--TSTTHGSITSVQAVYVPADDLTDPAPATTFNHLDAK 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D +E ++ S + H++ R++E +DI I G Sbjct: 323 TVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEVASKVKHILERYKELQDIIAILG 382 >gi|110801467|ref|YP_699462.1| F0F1 ATP synthase subunit beta [Clostridium perfringens SM101] gi|122956535|sp|Q0SQZ5|ATPB_CLOPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|110681968|gb|ABG85338.1| ATP synthase F1, beta subunit [Clostridium perfringens SM101] Length = 465 Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 104/300 (34%), Positives = 164/300 (54%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 C GR+ N LGKP+D + + I P + V + F+TGI+VID+ P Sbjct: 86 CVLGRIFNVLGKPLDSGAEVNNEE-KYPIHRPAPSFEEQSVVPQMFETGIKVIDLLAPYQ 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + + +K Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYYEMMESGVIK 204 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF +G +VLL +D+I RF+ + E++ G Sbjct: 205 NTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 265 IPSAVGYQPTLATEMGALQERI--TSTTHGSITSVQAVYVPADDLTDPAPATTFNHLDAK 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D +E ++ S + H++ R++E +DI I G Sbjct: 323 TVLSRSIAEIGIYPAVDPLDSSSRILDPRVVGEEHYEVASKVKHILERYKELQDIIAILG 382 >gi|163848585|ref|YP_001636629.1| F0F1 ATP synthase subunit beta [Chloroflexus aurantiacus J-10-fl] gi|222526520|ref|YP_002570991.1| F0F1 ATP synthase subunit beta [Chloroflexus sp. Y-400-fl] gi|190358278|sp|A9WGS4|ATPB_CHLAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808139|sp|B9LBM0|ATPB_CHLSY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|163669874|gb|ABY36240.1| ATP synthase F1, beta subunit [Chloroflexus aurantiacus J-10-fl] gi|222450399|gb|ACM54665.1| ATP synthase F1, beta subunit [Chloroflexus sp. Y-400-fl] Length = 471 Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 103/307 (33%), Positives = 169/307 (55%), Gaps = 15/307 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GRV N LG PIDG +G ++ + + PP+ Q + F+TGI+VID+ P Sbjct: 85 ATLGRVFNVLGDPIDGMGPIGP-EVERRPIHRDPPSFEEQNTQAQIFETGIKVIDLIAPF 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLG 211 G + +F G+G+GK+ ++ + ++ S+ VGER RE + E E + Sbjct: 144 TRGGKTAIFGGAGVGKTVVIQELIANIAKEQSGFSVFAGVGERSREGNDLIHEMKEARID 203 Query: 212 DN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 +N K+V+V +E P R LTA+T+AEYF +G ++LL +D+I RF + E Sbjct: 204 ENTTVFDKTVMVFGQMNEPPGARLRVGLTALTMAEYFRDEGRDILLFIDNIFRFVQAGSE 263 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 +++ G +P GY ++ +E+ L ERI + ++G+IT++ +V V D++ DP +V Sbjct: 264 VSSLLGRMPSQVGYQPTLGTEMGELQERI--TSTKRGSITSMQAVYVPADDYTDPAPATV 321 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 S LD I L RS+AE +P VDPLAS SR+ D +E ++ + ++ R+++ + Sbjct: 322 FSHLDATISLERSIAERAIFPAVDPLASTSRILDPNIVGEEHYRVAQEVKRVLQRYKDLK 381 Query: 388 DIRLIGG 394 DI I G Sbjct: 382 DIIAILG 388 >gi|219847906|ref|YP_002462339.1| F0F1 ATP synthase subunit beta [Chloroflexus aggregans DSM 9485] gi|254808138|sp|B8G6G6|ATPB_CHLAD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|219542165|gb|ACL23903.1| ATP synthase F1, beta subunit [Chloroflexus aggregans DSM 9485] Length = 471 Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 15/307 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GRV N LG PIDG G ++ + + PP+ Q + F+TGI+VID+ P Sbjct: 85 ATLGRVFNVLGDPIDGGPPFGP-EVERRPIHRDPPSFEEQSTQAQIFETGIKVIDLIAPF 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLG 211 G + +F G+G+GK+ ++ + ++ S+ VGER RE + E E + Sbjct: 144 TRGGKTAIFGGAGVGKTVVIQELIANIAKEQSGFSVFAGVGERSREGNDLIHEMREARID 203 Query: 212 DN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 +N K+++V +E P R LTA+T+AEYF +G ++LL +D+I RF + E Sbjct: 204 ENTTVFDKTIMVFGQMNEPPGARLRVGLTALTMAEYFRDQGRDILLFIDNIFRFVQAGSE 263 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 +++ G +P GY ++ +E+ L ERI + ++G+IT++ +V V D++ DP +V Sbjct: 264 VSSLLGRMPSQVGYQPTLGTEMGELQERI--TSTKRGSITSMQAVYVPADDYTDPAPATV 321 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 S LD I L RS+AE +P VDPLAS SR+ D +E ++ + ++ R+++ + Sbjct: 322 FSHLDATISLERSIAERAIFPAVDPLASTSRILDPNIVGEEHYRVAQEVKRVLQRYKDLK 381 Query: 388 DIRLIGG 394 DI I G Sbjct: 382 DIIAILG 388 >gi|116629873|ref|YP_815045.1| F0F1 ATP synthase subunit beta [Lactobacillus gasseri ATCC 33323] gi|238853684|ref|ZP_04644052.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 202-4] gi|282851612|ref|ZP_06260977.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 224-1] gi|311110490|ref|ZP_07711887.1| ATP synthase F1, beta subunit [Lactobacillus gasseri MV-22] gi|122273189|sp|Q042L5|ATPB_LACGA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116095455|gb|ABJ60607.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus gasseri ATCC 33323] gi|238833722|gb|EEQ25991.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 202-4] gi|282557580|gb|EFB63177.1| ATP synthase F1, beta subunit [Lactobacillus gasseri 224-1] gi|311065644|gb|EFQ45984.1| ATP synthase F1, beta subunit [Lactobacillus gasseri MV-22] Length = 480 Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GRV N LG PIDG +LGK D+ E + K P + E+ +TGI+VID+ P Sbjct: 87 LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S D +E V+ + H++ R++E +DI Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEVVGEEHYQVAVQVQHILQRYQELQDI 378 >gi|148654681|ref|YP_001274886.1| F0F1 ATP synthase subunit beta [Roseiflexus sp. RS-1] gi|166222410|sp|A5UQN3|ATPB_ROSS1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|148566791|gb|ABQ88936.1| ATP synthase F1, beta subunit [Roseiflexus sp. RS-1] Length = 471 Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 105/305 (34%), Positives = 169/305 (55%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV + LG PIDG+ + + + + PPA+ Q F+TGI+VID+ P Sbjct: 88 LGRVFDVLGDPIDGEGPVQATEYRP--IHRPPPALEDQSTTAQIFETGIKVIDLIAPFTR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLGDN 213 G + G+F G+G+GK+ ++ + ++ S+ VGER RE + E E + + Sbjct: 146 GGKTGIFGGAGVGKTVVIQELIANVAKEQSGFSVFAGVGERSREGNDLIHEMKEARIDEQ 205 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + K+V+V +E P R LTA+T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 TRVFDKTVMVFGQMNEPPGARLRVALTAMTMAEYFRDEGRDVLLFIDNIFRFVQAGSEVS 265 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P GY ++ +E+ L ERI + +KG+IT++ +V V D++ DP +V S Sbjct: 266 ALLGRMPSQVGYQPTLGTEMGELQERI--TSTKKGSITSMQAVYVPADDYTDPAPATVFS 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD I L RS+A +G YP VDPLAS SR+ D A+ ++ + ++ R+++ +DI Sbjct: 324 HLDATITLERSIAAKGIYPAVDPLASTSRILDPNIVGAEHYRVAREVQRVLQRYKDLQDI 383 Query: 390 RLIGG 394 I G Sbjct: 384 IAILG 388 >gi|300361422|ref|ZP_07057599.1| ATP synthase F1 sector beta subunit [Lactobacillus gasseri JV-V03] gi|300354041|gb|EFJ69912.1| ATP synthase F1 sector beta subunit [Lactobacillus gasseri JV-V03] Length = 480 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GRV N LG PIDG +LGK D+ E + K P + E+ +TGI+VID+ P Sbjct: 87 LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S D +E V+ + H++ R++E +DI Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVAVQVQHILQRYQELQDI 378 >gi|42518865|ref|NP_964795.1| F0F1 ATP synthase subunit beta [Lactobacillus johnsonii NCC 533] gi|81832255|sp|Q74K15|ATPB_LACJO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|41583151|gb|AAS08761.1| ATP synthase beta chain [Lactobacillus johnsonii NCC 533] Length = 480 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GRV N LG PIDG +LGK D+ E + K P + E+ +TGI+VID+ P Sbjct: 87 LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S D +E V+ + H++ R++E +DI Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDI 378 >gi|227889723|ref|ZP_04007528.1| F0F1 ATP synthase subunit beta [Lactobacillus johnsonii ATCC 33200] gi|227849587|gb|EEJ59673.1| F0F1 ATP synthase subunit beta [Lactobacillus johnsonii ATCC 33200] Length = 480 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GRV N LG PIDG +LGK D+ E + K P + E+ +TGI+VID+ P Sbjct: 87 LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S D +E V+ + H++ R++E +DI Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDI 378 >gi|268319739|ref|YP_003293395.1| ATP synthase F1, beta subunit [Lactobacillus johnsonii FI9785] gi|262398114|emb|CAX67128.1| ATP synthase F1, beta subunit [Lactobacillus johnsonii FI9785] Length = 480 Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GRV N LG PIDG +LGK D+ E + K P + E+ +TGI+VID+ P Sbjct: 87 LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S D +E V+ + H++ R++E +DI Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDI 378 >gi|329667588|gb|AEB93536.1| ATP synthase beta chain [Lactobacillus johnsonii DPC 6026] Length = 480 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GRV N LG PIDG +LGK D+ E + K P + E+ +TGI+VID+ P Sbjct: 87 LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K Sbjct: 146 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S D +E V+ + H++ R++E +DI Sbjct: 324 TNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDI 378 >gi|156741251|ref|YP_001431380.1| F0F1 ATP synthase subunit beta [Roseiflexus castenholzii DSM 13941] gi|190358702|sp|A7NIQ9|ATPB_ROSCS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|156232579|gb|ABU57362.1| ATP synthase F1, beta subunit [Roseiflexus castenholzii DSM 13941] Length = 471 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 104/305 (34%), Positives = 169/305 (55%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV + LG PIDG+ + + + + PPA+ Q F+TGI+VID+ P Sbjct: 88 LGRVFDVLGDPIDGEGPVQTTEYRP--IHRPPPALEDQSTTAQIFETGIKVIDLIAPFTR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE----VREFIEDYLGDN 213 G + G+F G+G+GK+ ++ + ++ + + VGER RE + E E + + Sbjct: 146 GGKTGIFGGAGVGKTVIIQELIANVAKEQSGYSVFAGVGERSREGNDLIHEMKEARIDEK 205 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + K+V+V +E P R LTA+T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 TRVFDKTVMVFGQMNEPPGARLRVGLTAMTMAEYFRDEGRDVLLFIDNIFRFVQAGSEVS 265 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P GY ++ +E+ L ERI + +KG+IT++ +V V D++ DP +V S Sbjct: 266 ALLGRMPSQVGYQPTLGTEMGELQERI--TSTKKGSITSMQAVYVPADDYTDPAPATVFS 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD I L RS+A +G YP VDPLAS SR+ D +E ++ + ++ R+++ +DI Sbjct: 324 HLDATITLERSIAAKGIYPAVDPLASTSRILDPNIVGEEHYRVAREVQRVLQRYKDLQDI 383 Query: 390 RLIGG 394 I G Sbjct: 384 IAILG 388 >gi|297621354|ref|YP_003709491.1| F-type ATP synthase, subunit beta [Waddlia chondrophila WSU 86-1044] gi|297376655|gb|ADI38485.1| F-type ATP synthase, subunit beta [Waddlia chondrophila WSU 86-1044] Length = 465 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 108/300 (36%), Positives = 166/300 (55%), Gaps = 12/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N LGKPID DS+ M I + PP++ +Q E ++TGI+VID+ P G Sbjct: 89 GRIFNILGKPIDNLDSISPKTPHMPI-HRAPPSLEQQETKEIVYETGIKVIDLLAPFLKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GKS ++ + + VGER RE + ++E L K+ Sbjct: 148 GKVGLFGGAGVGKSVIVMELIHNIATQHGGYSVFCGVGERTREGNDLWLEMKESGVLDKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 208 CLVFGQMNEPPGARLRVGLTGLTMAEYFRDKEHQDVLLFVDNIFRFVQAGSEVSALLGRM 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ ERI + + G+IT+V +V V D++ DP S+ S D I Sbjct: 268 PSAVGYQPTLSAEIGAFEERI--TSTQTGSITSVQAVYVPADDYTDPAPASLFSHFDASI 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPLAS SR+ D AW+ E+ L + ++ R+++ +DI I G Sbjct: 326 TLSRQIAELGIYPAVDPLASSSRILD-AWTVGEQHYDLACKVQKILQRYKDLQDIIAILG 384 >gi|300898049|ref|ZP_07116419.1| ATP synthase alpha/beta family, nucleotide-binding domain protein [Escherichia coli MS 198-1] gi|300358247|gb|EFJ74117.1| ATP synthase alpha/beta family, nucleotide-binding domain protein [Escherichia coli MS 198-1] Length = 223 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 129/215 (60%), Gaps = 4/215 (1%) Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 +DESP++R A +IA +F +G +VLL++DS+TR+A + REIA + GE P +GYP Sbjct: 2 ADESPLMRLKATELCHSIAAWFRDRGHHVLLLVDSLTRYAMAQREIALSLGEPPATKGYP 61 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 S F +P+L+E G SE G++TA+ +VL +GD+ DPI D R++LDGHIVL R LA Sbjct: 62 PSAFGMIPKLVESAGNSES-AGSMTAIYTVLAEGDDQQDPIVDCARAVLDGHIVLTRKLA 120 Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLIL 403 E G YP +D S+SR ++ S D ++ +L + E + + +GGY G D + Sbjct: 121 EAGHYPAIDIGQSISRCMNQVTSLDHQQSARALKQNYAAYMEIKPLIPLGGYVAGADASV 180 Query: 404 DKAVHQVPIIYDFLKQSPSDLSSEDVFQEITKKLQ 438 DKAV P I FL+Q D+ + + +LQ Sbjct: 181 DKAVKMFPAIERFLRQ---DMREPAALELVQSRLQ 212 >gi|320527155|ref|ZP_08028342.1| ATP synthase F1, beta subunit [Solobacterium moorei F0204] gi|320132483|gb|EFW25026.1| ATP synthase F1, beta subunit [Solobacterium moorei F0204] Length = 464 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 105/300 (35%), Positives = 165/300 (55%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+PIDG LG+ + I P +Q + +TGI+VID+ P Sbjct: 88 GRMFNVLGEPIDG---LGEVSAKHKLPIHRDAPTFAQQQTTSEILETGIKVIDLLCPYSK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + + +++ VGER RE + + LK Sbjct: 145 GGKIGLFGGAGVGKTVLMQELIHNIAIEHGGRSVVAGVGERTREGNDMYHEMEESGVLKN 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 +V+ +ESP R L+A+T+AEYF + +VLL +D+I RF + E++ G Sbjct: 205 TVLTYGQMNESPGARMRVALSALTMAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ RL ERI + +KG+IT+V ++ V D+ DP + S LD Sbjct: 265 MPSAVGYQPTLATEMGRLQERI--TSTDKGSITSVQAIYVPADDLTDPAPATTFSHLDAR 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+RS+A G YP VDPL S SR+ D DE ++ + ++ R+ E +DI I G Sbjct: 323 LVLDRSIAALGIYPAVDPLGSSSRMLDPLVIGDEHYEVARQVQQILQRYRELQDIIAILG 382 >gi|241895225|ref|ZP_04782521.1| F0F1 ATP synthase subunit beta [Weissella paramesenteroides ATCC 33313] gi|241871531|gb|EER75282.1| F0F1 ATP synthase subunit beta [Weissella paramesenteroides ATCC 33313] Length = 466 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/297 (34%), Positives = 163/297 (54%), Gaps = 10/297 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GRV N LG+P+DG ++LG D+ + + + PA + +TGI+VID+ P Sbjct: 85 ATLGRVFNVLGEPVDGGEALGD-DVQRDPIHRDAPAYDELSTSTEILETGIKVIDLLAPY 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + G L Sbjct: 144 VRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMQGSGVL 203 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K++ +V +E P R LT +TIAE+F G +VLL +D+I RF + E++ Sbjct: 204 KQTAMVYGQMNEPPGARMRVALTGLTIAEHFRDVNGQDVLLFIDNIYRFTQAGSEVSALL 263 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 264 GRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLD 321 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPLAS S LA + + + + + H + R+ E +DI Sbjct: 322 ATTNLERSLTQQGIYPAVDPLASTSTALAPEIVGQEHYDVATEVQHTLQRYRELQDI 378 >gi|256848005|ref|ZP_05553449.1| ATP synthase F1, beta subunit [Lactobacillus coleohominis 101-4-CHN] gi|256715065|gb|EEU30042.1| ATP synthase F1, beta subunit [Lactobacillus coleohominis 101-4-CHN] Length = 473 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 113/328 (34%), Positives = 172/328 (52%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG G+ M I P + + +TGI+VID+ P G Sbjct: 88 LGRVFNVLGEPIDGGPEFGEDAQRMPIHRDAPKYDDLNNETEILETGIKVIDLLAPYVRG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + G L K+ Sbjct: 148 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERSREGNDMYYEMKGSGVLDKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF KG +VLL +D+I RF + E++ G + Sbjct: 208 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 268 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 L R L + G YP VDPLAS S L + + ++ + + H++ R+ E +DI I Sbjct: 326 NLERRLTQIGIYPAVDPLASTSTALTPEIVGQEHYEVATEVQHVLQRYRELQDIISI--- 382 Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420 G+D + D+ V + I +FL QS Sbjct: 383 -LGMDELSDEEKTIVARARRIQNFLSQS 409 >gi|206900262|ref|YP_002251666.1| ATP synthase F1, beta subunit [Dictyoglomus thermophilum H-6-12] gi|226740190|sp|B5YBP8|ATPB_DICT6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|206739365|gb|ACI18423.1| ATP synthase F1, beta subunit [Dictyoglomus thermophilum H-6-12] Length = 465 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 107/297 (36%), Positives = 169/297 (56%), Gaps = 16/297 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF---KTGIRVIDIFTPL 158 GRV+N G+PIDG + + +G E+ + A +RV+ + +TGI+ ID+ TP Sbjct: 85 LGRVVNVFGEPIDGGEKI-RG----EVTPIIKNAAEFRRVQPSYSILETGIKAIDLLTPF 139 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + IS+ +GER RE E ++E L Sbjct: 140 PQGGKIGLFGGAGVGKTVLIMELIHNVAVAHGGISVFAGIGERSREGNELWLEMKESGVL 199 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P +R PLTA+TIAEYF G +VLL++D+I R+ + E+++ Sbjct: 200 SKAALVFGQMNEPPGVRMRVPLTALTIAEYFRDYLGKDVLLLMDNIFRYVQAGMEVSSML 259 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +EL + ERI + G+ITAV +V V D+ DP ++ S LD Sbjct: 260 GRIPSAVGYQPTLITELGEVEERI--LSTDTGSITAVQAVYVPADDLTDPAPATIFSHLD 317 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 +VL+RS+AE G YP VDPLAS S++ + + E V+ + ++ +E +DI Sbjct: 318 STLVLSRSIAEMGIYPAVDPLASSSQILEPKFVGYEHAEVARKVVEILQHYESLKDI 374 >gi|38906125|gb|AAR27815.1| ATP synthase beta chain [Lactobacillus gallinarum] Length = 371 Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 158/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG K I + P + + +TGI+VID+ P G Sbjct: 28 LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 87 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 88 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 147 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++T G + Sbjct: 148 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSTLLGRM 207 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D + DP + + LD Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADAYTDPAPSTTFAHLDATT 265 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 266 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHILQRYHELQDI 319 >gi|291276667|ref|YP_003516439.1| ATP synthase F1 sector subunit beta [Helicobacter mustelae 12198] gi|290963861|emb|CBG39697.1| ATP synthase F1 sector beta subunit [Helicobacter mustelae 12198] Length = 466 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 166/299 (55%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ IDG + L K + I + P N+ + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVIGEVIDGGEEL-KDVQTWPIHREAPSFENQSTKTEMFETGIKVVDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ +L ERI + +KG+IT+V +V V D+ DP SV S LD Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFSHLDAKT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR+ D +E ++ + + ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSSSRILDPQIVGEEHYRIATGIQQILQKYKDLQDIIAILG 382 >gi|159900585|ref|YP_001546832.1| F0F1 ATP synthase subunit beta [Herpetosiphon aurantiacus ATCC 23779] gi|226740209|sp|A9AVV4|ATPB_HERA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|159893624|gb|ABX06704.1| ATP synthase F1, beta subunit [Herpetosiphon aurantiacus ATCC 23779] Length = 471 Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 166/306 (54%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV + G+PIDG+ ++G +M I P + + F+TGI+VID+ P G Sbjct: 87 LGRVFDVQGRPIDGEGAVGTTK-TMPIHRPAPTFEEQSNRAELFETGIKVIDLIAPFTKG 145 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-- 215 + GVF G+G+GK+ L+S A+ V VGER RE + I + + Sbjct: 146 GKTGVFGGAGVGKTVIIQELISNIAKEQSGYSVFAG-VGERSREGNDLIHEMKDSKIPGT 204 Query: 216 ------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 K+V+V +E P R L+A+T+AEYF +G +VLL +D+I RF + E+ Sbjct: 205 DQTVFDKTVMVFGQMNEPPGARLRVALSALTMAEYFREEGRDVLLFVDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P GY ++ +E+ L ERI + + G+IT++ +V V D++ DP + Sbjct: 265 SALLGRMPSQVGYQPTLGTEMGELQERI--TSTKTGSITSLQAVYVPADDYTDPAPATTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD I L RS++E+G YP VDPLAS SR+ D +E ++ + + ++ R+++ +D Sbjct: 323 AHLDATISLERSISEKGIYPAVDPLASTSRILDPNIVGEEHYRVATEVQRMLQRYKDLQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|6652833|gb|AAF22498.1|AF098522_8 F1F0-ATPase subunit beta [Lactobacillus acidophilus] Length = 478 Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 103/294 (35%), Positives = 159/294 (54%), Gaps = 9/294 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG +L K I + P N K +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPALPKDHPREGIHKEAPKYENLTTSRKNLETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQKIIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ + + +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTI-TRMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAYLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 324 NLERSLVEQGIYPAVDPLESSSSALDPEEVGQEHYEVATRVQHVLQRYHELQDI 377 >gi|38906131|gb|AAR27818.1| ATP synthase beta chain [Lactobacillus helveticus] Length = 371 Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG K I + P + + +TGI+VID+ P G Sbjct: 28 LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 87 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 88 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 147 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 148 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 207 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 265 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 266 NLERSLVEQGIYPAVDPLESTSSALDPEVVGQEHYEVATRVQHVLQRYHELQDI 319 >gi|167755038|ref|ZP_02427165.1| hypothetical protein CLORAM_00542 [Clostridium ramosum DSM 1402] gi|237735237|ref|ZP_04565718.1| ATP synthase subunit beta [Mollicutes bacterium D7] gi|167705088|gb|EDS19667.1| hypothetical protein CLORAM_00542 [Clostridium ramosum DSM 1402] gi|229380982|gb|EEO31073.1| ATP synthase subunit beta [Coprobacillus sp. D7] Length = 468 Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 104/298 (34%), Positives = 162/298 (54%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+PIDG ++LG M I P ++ + +TGI+V+D+ P G Sbjct: 89 GRMFNVLGQPIDGKEALGDSTKKMPIHRSAPTYAEQRTETEILETGIKVVDLICPFIKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ F + + +S+ VGER RE + + E L K+ Sbjct: 149 KIGLFGGAGVGKTVLIQEFINNIATEHGGLSVFAGVGERSREGNDLYYEMKESGVLSKTT 208 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I RF + E++ G +P Sbjct: 209 LVFGQMNEPPGARLRVALTGLTMAEEFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRVP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD +V Sbjct: 269 SQAGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDAKVV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+A G YP VDPL S SR D E ++ + ++ RF+E +DI I G Sbjct: 327 LDRSIAALGIYPAVDPLNSSSRALDPLVVGTEHYEVAHGVQQILQRFQELQDIIAILG 384 >gi|331701229|ref|YP_004398188.1| ATP synthase subunit beta [Lactobacillus buchneri NRRL B-30929] gi|329128572|gb|AEB73125.1| ATP synthase subunit beta [Lactobacillus buchneri NRRL B-30929] Length = 478 Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 113/328 (34%), Positives = 170/328 (51%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PIDG G I P + +TGI+VID+ P G Sbjct: 88 LGRVFNVLGDPIDGGPEFGPDAERWPIHRDAPKYDQLNPSTEILETGIKVIDLLEPYTRG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + IS+ VGER RE + + G L+K+ Sbjct: 148 GKVGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLEKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 208 AMVYGQMNEPPGARMRVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRI 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG IT++ +V V D++ DP + + LD Sbjct: 268 PSAVGYQPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATT 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 L RSL ++G YP VDPLAS S D A E ++ + + H++ R+ E +DI I Sbjct: 326 NLERSLTQQGIYPAVDPLASTSSALDPAIVGQEHYEVATEVQHVLQRYRELQDIISI--- 382 Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ V++ I FL QS Sbjct: 383 -LGMDELSDEEKTVVNRARRIQFFLSQS 409 >gi|260102580|ref|ZP_05752817.1| ATP synthase F1 [Lactobacillus helveticus DSM 20075] gi|260083607|gb|EEW67727.1| ATP synthase F1 [Lactobacillus helveticus DSM 20075] Length = 479 Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG + K I + P + + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPAFSKDHPRESIHKEAPEYEDLTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHILQRYHELQDI 378 >gi|38906119|gb|AAR27812.1| ATP synthase beta chain [Lactobacillus amylovorus] Length = 371 Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG K I + P + + +TGI+VID+ P G Sbjct: 28 LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 87 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 88 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 147 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 148 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 207 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 265 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 266 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHILQRYHELQDI 319 >gi|309790652|ref|ZP_07685205.1| F0F1 ATP synthase subunit beta [Oscillochloris trichoides DG6] gi|308227318|gb|EFO80993.1| F0F1 ATP synthase subunit beta [Oscillochloris trichoides DG6] Length = 459 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 166/307 (54%), Gaps = 15/307 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+PIDG + + + PP+ Q E + F+TGI+VID+ P Sbjct: 73 ATLGRVFNVLGQPIDGAGPVA-ASVERRPIHNEPPSFEEQSTEAQVFETGIKVIDLIAPF 131 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLG 211 G + +F G+G+GK+ ++ + ++ S+ VGER RE + E E + Sbjct: 132 TRGGKTAIFGGAGVGKTVVIQELIANIAKEQSGFSVFAGVGERSREGNDLIAEMKEAQID 191 Query: 212 DN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 D K+V+V +E P R LTA+T+AEYF +G ++LL +D+I RF + E Sbjct: 192 DKTTVFDKTVMVFGQMNEPPGARLRVGLTALTMAEYFRDEGRDILLFVDNIFRFVQAGSE 251 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 +++ G +P GY ++ +E+ L ERI + ++G+IT++ +V V D++ DP +V Sbjct: 252 VSSLLGRMPSQVGYQPTLGTEMGELQERI--TSTKRGSITSMQAVYVPADDYTDPAPATV 309 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD I L RS+AE +P VDPLAS SR+ D +E ++ + ++ R+ + + Sbjct: 310 FAHLDATISLERSIAERAIFPAVDPLASTSRILDPHVVGEEHYRVAQDVKRVLQRYRDLK 369 Query: 388 DIRLIGG 394 DI I G Sbjct: 370 DIIAILG 376 >gi|227877281|ref|ZP_03995354.1| H(+)-transporting two-sector ATPase [Lactobacillus crispatus JV-V01] gi|256842844|ref|ZP_05548332.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 125-2-CHN] gi|256848792|ref|ZP_05554226.1| F0F1 ATP synthase subunit beta [Lactobacillus crispatus MV-1A-US] gi|262045810|ref|ZP_06018774.1| ATP synthase F1, beta subunit [Lactobacillus crispatus MV-3A-US] gi|293381679|ref|ZP_06627660.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 214-1] gi|295692633|ref|YP_003601243.1| ATP synthase subunit beta [Lactobacillus crispatus ST1] gi|312977636|ref|ZP_07789383.1| ATP synthase F1, beta subunit [Lactobacillus crispatus CTV-05] gi|227863137|gb|EEJ70583.1| H(+)-transporting two-sector ATPase [Lactobacillus crispatus JV-V01] gi|256614264|gb|EEU19465.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 125-2-CHN] gi|256714331|gb|EEU29318.1| F0F1 ATP synthase subunit beta [Lactobacillus crispatus MV-1A-US] gi|260573769|gb|EEX30325.1| ATP synthase F1, beta subunit [Lactobacillus crispatus MV-3A-US] gi|290921726|gb|EFD98747.1| ATP synthase F1, beta subunit [Lactobacillus crispatus 214-1] gi|295030739|emb|CBL50218.1| ATP synthase subunit beta [Lactobacillus crispatus ST1] gi|310895375|gb|EFQ44442.1| ATP synthase F1, beta subunit [Lactobacillus crispatus CTV-05] Length = 479 Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG K I + P + + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYADLTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D +E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGEEHYEVATRVQHVLQRYHELQDI 378 >gi|227499461|ref|ZP_03929572.1| V family two sector ATPase, V(1) subunit B [Anaerococcus tetradius ATCC 35098] gi|227218523|gb|EEI83766.1| V family two sector ATPase, V(1) subunit B [Anaerococcus tetradius ATCC 35098] Length = 454 Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 114/356 (32%), Positives = 188/356 (52%), Gaps = 23/356 (6%) Query: 57 DNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID 114 D +GQV++I+ + V I G EE SL D+V FH I + GR N +G PID Sbjct: 38 DFVGQVVKIDDETVTIEVFGNTEEFSLDDIVVSFHEKPLEIPLNESILGRSFNGIGNPID 97 Query: 115 -GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 G D S+E + P A R+ +TGI ID+ T L GQ++ VF+GSG+ Sbjct: 98 NGGDIYSDHCYSVEGLPLNPVA--REYPRDFIQTGISSIDVLTTLIRGQKLPVFSGSGLS 155 Query: 174 KSTLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSD 225 + L + R CF + + +G + E F + + ++ VV+ Sbjct: 156 HNELAAQIVRQAKLKTDEDFCF---VFAAMGIKKDEAMFFEDAFNKAGVRDKVVMYQNLA 212 Query: 226 ESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 +SPI+ ++ AP A+T AEY + K +VL+I+ +T ++ ++RE+++ GE+P +GYP Sbjct: 213 DSPIMERLIAPKCALTAAEYLAYEKNYHVLVIITDMTSYSEALREVSSIRGEVPSRKGYP 272 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 ++S+L L ER G E KG++T + + + D+ P+AD I +G IV++R+L+ Sbjct: 273 GYLYSDLASLYERAGMIEGVKGSVTLIPILTMPNDDITHPVADLTGYITEGQIVIDRALS 332 Query: 344 EEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +G YPP++ L S+SRL + AD + L++ + + +E R+I I G Sbjct: 333 NKGIYPPINVLPSLSRLMKDGIGEGYTRADHEDLMNQIYESYSKVQEVRNIAQIVG 388 >gi|161507276|ref|YP_001577230.1| F0F1 ATP synthase subunit beta [Lactobacillus helveticus DPC 4571] gi|172048219|sp|A8YUK1|ATPB_LACH4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|160348265|gb|ABX26939.1| ATP synthase beta subunit [Lactobacillus helveticus DPC 4571] gi|328468723|gb|EGF39705.1| F0F1 ATP synthase subunit beta [Lactobacillus helveticus MTCC 5463] Length = 479 Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG + K I + P + + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPAFSKDHPRESIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHVLQRYHELQDI 378 >gi|1168577|sp|P42466|ATPB_HERAU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|560837|emb|CAA54203.1| ATPase beta-subunit [Herpetosiphon aurantiacus] Length = 471 Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 165/306 (53%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV + G+PIDG+ +G +M I P + + F+TGI+VID+ P G Sbjct: 87 LGRVFDVQGRPIDGEGPVGTTK-TMPIHRPAPTFEEQSNRAELFETGIKVIDLIAPFTKG 145 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-- 215 + GVF G+G+GK+ L+S A+ V VGER RE + I + + Sbjct: 146 GKTGVFGGAGVGKTVIIQELISNIAKEQSGYSVFAG-VGERSREGNDLIHEMKDSKIPGT 204 Query: 216 ------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 K+V+V +E P R L+A+T+AEYF +G +VLL +D+I RF + E+ Sbjct: 205 DQTVFDKTVMVFGQMNEPPGARLRVALSALTMAEYFREEGRDVLLFVDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P GY ++ +E+ L ERI + + G+IT++ +V V D++ DP + Sbjct: 265 SALLGRMPSQVGYQPTLGTEMGELQERI--TSTKTGSITSLQAVYVPADDYTDPAPATTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD I L RS++E+G YP VDPLAS SR+ D +E ++ + + ++ R+++ +D Sbjct: 323 AHLDATISLERSISEKGIYPAVDPLASTSRILDPNIVGEEHYRVATEVQRMLQRYKDLQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|213422101|ref|ZP_03355167.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 223 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 89/210 (42%), Positives = 128/210 (60%), Gaps = 2/210 (0%) Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V ATSD + R A A T+AEYF +G V+L +DS+TR+A ++R++A SGE P Sbjct: 3 AVFATSDFPSVDRCNAAQLATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPA 62 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGYP SVF LPRLLER P +G+ITA +VL++ + DP+AD +RSILDGH+ L Sbjct: 63 RRGYPASVFDNLPRLLER--PGATSEGSITAFYTVLLESEEEADPMADEIRSILDGHLYL 120 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 +R LA +G YP +D L SVSR+ + + + S++ L+ R EE + +G YRPG Sbjct: 121 SRKLAGQGHYPAIDVLKSVSRVFGQVTTPTHAEQASAVRKLMTRLEELQLFIDLGEYRPG 180 Query: 399 VDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 ++ D+A+ + +L Q + SS D Sbjct: 181 ENIDNDRAMQMRDSLKAWLCQPVAQYSSFD 210 >gi|58337090|ref|YP_193675.1| F0F1 ATP synthase subunit beta [Lactobacillus acidophilus NCFM] gi|75432972|sp|Q5FKY0|ATPB_LACAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|58254407|gb|AAV42644.1| ATP synthase beta subunit [Lactobacillus acidophilus NCFM] Length = 479 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG + K I + P + + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPAFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAYLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHVLQRYHELQDI 378 >gi|255525815|ref|ZP_05392744.1| ATP synthase F1, beta subunit [Clostridium carboxidivorans P7] gi|255510458|gb|EET86769.1| ATP synthase F1, beta subunit [Clostridium carboxidivorans P7] Length = 466 Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 108/300 (36%), Positives = 167/300 (55%), Gaps = 12/300 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVE-KGFKTGIRVIDIFTPLC 159 GR+ N LG+PID G + +M P P+ Q V + F+TGI+VID+ P Sbjct: 87 LGRLFNMLGQPID---ECGDCNATMTYPIHRPAPSFEDQSVSPEMFETGIKVIDLIAPYQ 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E + Sbjct: 144 RGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVID 203 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K+ +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ G Sbjct: 204 KTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALLGR 263 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 264 IPSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFAHLDAT 321 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS++E G YP VDPL S SR+ D +E ++ SS+ H++ R+ E +DI I G Sbjct: 322 TVLSRSISELGIYPAVDPLESSSRILDPRIVGEEHYEIASSVKHILERYRELQDIIAILG 381 >gi|38906129|gb|AAR27817.1| ATP synthase beta chain [Lactobacillus johnsonii] Length = 371 Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 106/295 (35%), Positives = 162/295 (54%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GRV N LG PIDG +LGK D+ E + K P + E+ +TGI+VID+ P Sbjct: 28 LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 86 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K Sbjct: 87 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 146 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 147 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 206 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY + +E+ +L ERI + +KG+IT++ +V V D++ D + + LD Sbjct: 207 MPSAVGYQPXLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDTALSTTFAHLDAT 264 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S D +E V+ + H++ R++E +DI Sbjct: 265 TNLERRLVEQGIYPAVDPLESTSSALDPEIVGEEHYEVAVKVQHILQRYQELQDI 319 >gi|34556938|ref|NP_906753.1| F0F1 ATP synthase subunit beta [Wolinella succinogenes DSM 1740] gi|1168583|sp|P42470|ATPB_WOLSU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|587588|emb|CAA54207.1| ATPase beta-subunit [Wolinella succinogenes] gi|34482653|emb|CAE09653.1| ATP SYNTHASE F1 SECTOR BETA SUBUNIT [Wolinella succinogenes] Length = 467 Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 161/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG D L K + I P N+ + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVVGDVIDGGDEL-KEPVKWSIHRTAPTFENQSTKTEMFETGIKVVDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + L K Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ +L ERI + +KG+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR+ D + D K + + ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEDHYKTATGVQQVLQKYKDLQDIIAILG 382 >gi|169351551|ref|ZP_02868489.1| hypothetical protein CLOSPI_02331 [Clostridium spiroforme DSM 1552] gi|169291773|gb|EDS73906.1| hypothetical protein CLOSPI_02331 [Clostridium spiroforme DSM 1552] Length = 468 Score = 162 bits (410), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 106/302 (35%), Positives = 164/302 (54%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR+ N LG+PIDG ++LG D+ + + P +QR E +TGI+V+D+ P Sbjct: 86 ATLGRMFNVLGQPIDGKEALGD-DVKKMPIHRSAPTYAQQRTETEILETGIKVVDLICPF 144 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ F + +S+ VGER RE + + E L Sbjct: 145 IKGGKIGLFGGAGVGKTVLIQEFINNIATQHGGLSVFAGVGERSREGNDLYYEMKESGVL 204 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AE F +G +VLL +D+I RF + E++ Sbjct: 205 SKTTLVFGQMNEPPGARLRVALTGLTMAEEFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 264 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 265 GRVPSQAGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLD 322 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 +VL+RS+A G YP VDPL S SR D E ++ + ++ RF+E +DI I Sbjct: 323 AKVVLDRSIAALGIYPAVDPLNSSSRALDPLVVGKEHYEVAHGVQQILQRFQELQDIIAI 382 Query: 393 GG 394 G Sbjct: 383 LG 384 >gi|116333888|ref|YP_795415.1| F0F1 ATP synthase subunit beta [Lactobacillus brevis ATCC 367] gi|122269425|sp|Q03QY8|ATPB_LACBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|28193537|emb|CAD48596.1| F1F0-ATPase subunit beta [Lactobacillus brevis] gi|116099235|gb|ABJ64384.1| F0F1-type ATP synthase, beta subunit [Lactobacillus brevis ATCC 367] Length = 471 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 103/294 (35%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PIDG G M I P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGDPIDGGAEFGPDAERMPIHRDAPKYDELNPTTEILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + G LK++ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYWEMKGSGVLKQT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF KG +VLL +D+I RF + E++ G + Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L R+L ++G YP VDPLAS S LA + + + + + ++ R+ E +DI Sbjct: 325 NLERALTQQGIYPAVDPLASTSTALAPEIIGQEHYDVATEVQRVLQRYHELQDI 378 >gi|315038012|ref|YP_004031580.1| F0F1 ATP synthase subunit beta [Lactobacillus amylovorus GRL 1112] gi|325956465|ref|YP_004291877.1| F0F1 ATP synthase subunit beta [Lactobacillus acidophilus 30SC] gi|312276145|gb|ADQ58785.1| F0F1 ATP synthase subunit beta [Lactobacillus amylovorus GRL 1112] gi|325333030|gb|ADZ06938.1| F0F1 ATP synthase subunit beta [Lactobacillus acidophilus 30SC] gi|327183292|gb|AEA31739.1| F0F1 ATP synthase subunit beta [Lactobacillus amylovorus GRL 1118] Length = 479 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG K I + P + + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHILQRYHELQDI 378 >gi|38906117|gb|AAR27811.1| ATP synthase beta chain [Lactobacillus gasseri ATCC 33323] Length = 371 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 105/295 (35%), Positives = 162/295 (54%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GRV N LG PIDG +LGK D+ E + K P + E+ +TGI+VID+ P Sbjct: 28 LGRVFNVLGDPIDGGPALGK-DVKREGIHKEAPKYDELSTSEEILETGIKVIDLLEPYVR 86 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+ +T++ + + IS+ VGER RE + + E L K Sbjct: 87 GGKVGLFGGAGVATTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSK 146 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 147 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQAGSEVSALLGR 206 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 207 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 264 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S D +E V+ + H++ R++E +DI Sbjct: 265 TNLERRLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVAVQVQHILQRYQELQDI 319 >gi|12045261|ref|NP_073072.1| F0F1 ATP synthase subunit beta [Mycoplasma genitalium G37] gi|2506209|sp|P47639|ATPB_MYCGE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|3844991|gb|AAC71627.1| ATP synthase F1, beta subunit [Mycoplasma genitalium G37] gi|166078639|gb|ABY79257.1| ATP synthase F1, beta subunit [synthetic Mycoplasma genitalium JCVI-1.0] Length = 476 Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 108/301 (35%), Positives = 169/301 (56%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PIDG + L K LS+ + PPA + Q F+TGI+VID+ TP Sbjct: 92 LGRMFNVLGEPIDGKEPLPKKPKLSIH---RNPPAFDEQPNTVDIFETGIKVIDLLTPYV 148 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E G + Sbjct: 149 RGGKIGLFGGAGVGKTVLVQELIHNIAKEHSGLSVFAGVGERTREGNDLYYEMIQGGVID 208 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274 K+V+V +E P R LTA+T+AEYF + NVLL +D+I RF + E++ G Sbjct: 209 KTVLVFGQMNEPPGARMRVALTALTMAEYFRDHDNQNVLLFIDNIFRFTQAGSEVSALLG 268 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + + G+IT+V ++ V D+ DP + + LD Sbjct: 269 RMPSAVGYQPTLAIEMGKLQERIAST--KTGSITSVQAIYVPADDLTDPAPATTFTHLDA 326 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+R++A G +P ++PL S SRL D + + K+ + +++ RF E +DI I Sbjct: 327 KTVLDRNIAALGIFPAINPLESTSRLLDPSVVGINHYKVALGVQNILQRFAELQDIIAIL 386 Query: 394 G 394 G Sbjct: 387 G 387 >gi|13508337|ref|NP_110287.1| F0F1 ATP synthase subunit beta [Mycoplasma pneumoniae M129] gi|2493024|sp|Q50331|ATPB_MYCPN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|1209766|gb|AAC43659.1| ATP synthase beta chain [Mycoplasma pneumoniae] gi|1673912|gb|AAB95892.1| ATP synthase beta chain [Mycoplasma pneumoniae M129] gi|301633266|gb|ADK86820.1| ATP synthase F1, beta subunit [Mycoplasma pneumoniae FH] Length = 475 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 117/362 (32%), Positives = 191/362 (52%), Gaps = 17/362 (4%) Query: 68 DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 DIV +G E ++ + V ++ + GR+ N LGKPIDG + L K + Sbjct: 56 DIVRCIALGPTEGLARNEKVTNYNHPIEVPVGKNVLGRMFNVLGKPIDGKEELPKKP-QL 114 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 I K P ++ + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 115 PIHRKPPSFDDQSNTLEIFETGIKVIDLLTPYARGGKIGLFGGAGVGKTVLVQELIHNIA 174 Query: 187 FDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242 + +S+ VGER RE + + E G + K+ +V +E P R LTA+T+A Sbjct: 175 KEHSGLSVFAGVGERTREGNDLYYEMIQGGVIDKTALVFGQMNEPPGARMRVALTALTMA 234 Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 EYF + +VLL +D+I RF + E++ G +P A GY ++ +E+ +L ERI + Sbjct: 235 EYFRDHDNQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERIAST- 293 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G+IT+V ++ V D+ DP + + LD VL+R++A G +P ++PL S SRL Sbjct: 294 -KTGSITSVQAIYVPADDLTDPAPATTFTHLDAKTVLDRNIAALGIFPAINPLESTSRLL 352 Query: 362 D-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFL 417 D + K+ + +++ RF E +DI I G+D + D+ V + I +FL Sbjct: 353 DPNIVGINHYKVALGVQNILQRFAELQDIIAI----LGIDELADEDKIIVERARRIRNFL 408 Query: 418 KQ 419 Q Sbjct: 409 SQ 410 >gi|227874106|ref|ZP_03992312.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268] gi|227840018|gb|EEJ50442.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268] Length = 463 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 169/299 (56%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ IDG D + G+ EI K P +++ V++ +TGI+VID+ P G Sbjct: 85 LGRLFNVLGETIDGKDPITDGE-EWEIHRKPPAFVDQSPVQEVLETGIKVIDLIAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ R+ + I + VGER RE + ++E +K + Sbjct: 144 GKVGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGVGERSREGNDLYMEMTESGVIKNT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +ESP R T +T+AEYF + +VLL +D+I RF + E+++ G + Sbjct: 204 ALVFGQMNESPGARMRVAETGLTMAEYFRDVQKKDVLLFIDNIFRFVQAGSEVSSLLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ +L ERI + ++G++T+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLASEMGQLQERIAST--KEGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ +++ E S+ ++ +++E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLESSSRILEESIVGKEHYDTAQSVLQILQKYKELQDIIAILG 380 >gi|260892012|ref|YP_003238109.1| ATP synthase F1, beta subunit [Ammonifex degensii KC4] gi|260864153|gb|ACX51259.1| ATP synthase F1, beta subunit [Ammonifex degensii KC4] Length = 475 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 167/299 (55%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PIDG + K + I PP + + + +TG++VID+ P G Sbjct: 94 LGRLLDVLGNPIDGKGPI-KAEKYYPIHRPAPPLVEQSTKVEQLETGLKVIDLLVPFMKG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ ++ + IS+ VGER RE E ++E L K+ Sbjct: 153 GKIGMFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNELYLEMTEAGVLDKT 212 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 ++V +E P R LTA+ +AEYF +G +VLL +D+I RFA + E++ G + Sbjct: 213 MMVFGQMNEPPGCRLRVGLTALCLAEYFRDEEGADVLLFIDNIFRFAQAGTEVSALLGRM 272 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + KG+IT+V ++ V D+ DP + + LDG + Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTVKGSITSVQAIYVPADDLTDPAPATTFAHLDGTV 330 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D K + ++ + ++ R++E +DI I G Sbjct: 331 VLSRQIAELGIYPAVDPLDSTSRILDPKVVGVEHYQVARGVQKVLQRYKELQDIIAILG 389 >gi|254520283|ref|ZP_05132339.1| ATP synthase F1 sector subunit beta [Clostridium sp. 7_2_43FAA] gi|226914032|gb|EEH99233.1| ATP synthase F1 sector subunit beta [Clostridium sp. 7_2_43FAA] Length = 463 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 114/330 (34%), Positives = 179/330 (54%), Gaps = 23/330 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157 GRV N LG PID GD+ ++ M + P+ Q +E + F+TGI+VID+ P Sbjct: 87 LGRVFNVLGHPIDN-----AGDVEIKEMYPIHRPAPSFKEQSLEPQMFETGIKVIDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E Sbjct: 142 YQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYYEMKESGV 201 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 + K+ +V +ESP R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 202 IDKTALVFGQMNESPGARMRVSLTGLTMAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALL 261 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 GRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLD 319 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 VL+RS+AE G YP VDPL S SR+ D + + + + + +++ R++E +DI I Sbjct: 320 ATTVLSRSIAELGIYPAVDPLESNSRILDPRVVGREHYDVATEVKNILERYKELQDIIAI 379 Query: 393 GGYRPGVDLILD---KAVHQVPIIYDFLKQ 419 GVD + D K V + + FL Q Sbjct: 380 ----LGVDELSDEDKKVVARARRVQRFLSQ 405 >gi|213585852|ref|ZP_03367678.1| flagellum-specific ATP synthase [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 205 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 86/182 (47%), Positives = 113/182 (62%) Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A IAE F +G +VLLI+DS+TR+A + REIA GE P +GYP SVF++LP L+ER Sbjct: 2 ATRIAEDFRDRGQHVLLIMDSLTRYAMAQREIALAIGEPPATKGYPPSVFAKLPALVERA 61 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G G+ITA +VL +GD+ DPIADS R+ILDGHIVL+R LAE G YP +D AS+ Sbjct: 62 GNGIHGGGSITAFYTVLTEGDDQQDPIADSARAILDGHIVLSRRLAEAGHYPAIDIEASI 121 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR + V L+ F+ RD+ +G Y G D +LDKA+ P + FL Sbjct: 122 SRAMTALITEQHYARVRLFKQLLSSFQRNRDLISVGAYAKGSDPMLDKAITLWPQLEAFL 181 Query: 418 KQ 419 +Q Sbjct: 182 QQ 183 >gi|227903658|ref|ZP_04021463.1| H(+)-transporting two-sector ATPase [Lactobacillus acidophilus ATCC 4796] gi|227868545|gb|EEJ75966.1| H(+)-transporting two-sector ATPase [Lactobacillus acidophilus ATCC 4796] Length = 479 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 159/294 (54%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG + K I + P + + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPAFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHVLQRYHELQDI 378 >gi|281418491|ref|ZP_06249510.1| ATP synthase F1, beta subunit [Clostridium thermocellum JW20] gi|281407575|gb|EFB37834.1| ATP synthase F1, beta subunit [Clostridium thermocellum JW20] Length = 464 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 106/303 (34%), Positives = 168/303 (55%), Gaps = 17/303 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157 GRV N LG+PIDG KGD+ + + P ++ Q+ V + +TGI+VID+ P Sbjct: 88 LGRVFNVLGEPIDG-----KGDVKATTYLPIHREAPGLDEQKPVTEILETGIKVIDLLAP 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ R+ + + + VGER RE + + Sbjct: 143 YAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFTGVGERSREGNDLWNEMNESGV 202 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATN 272 ++K+ +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ Sbjct: 203 IQKTALVFGQMNEPPGSRMRVGLTGLTMAEYFRDELGQDVLLFIDNIFRFIQAGSEVSAL 262 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + L Sbjct: 263 LGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHL 320 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391 D VL+R + E+G YP VDPL S SR+ D+ DE V+ + ++ R++E +DI Sbjct: 321 DATTVLSRHIVEQGIYPAVDPLDSTSRVLDRRIVGDEHYTVARKVQEILQRYKELQDIIA 380 Query: 392 IGG 394 I G Sbjct: 381 ILG 383 >gi|224438542|ref|ZP_03659462.1| F0F1 ATP synthase subunit beta [Helicobacter cinaedi CCUG 18818] gi|313144968|ref|ZP_07807161.1| ATP synthase subunit beta [Helicobacter cinaedi CCUG 18818] gi|313129999|gb|EFR47616.1| ATP synthase subunit beta [Helicobacter cinaedi CCUG 18818] Length = 466 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G IDG + L DL I + P N+ + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVTGDVIDGGELLAT-DLKWAIHREAPSFENQSTRTEMFETGIKVVDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAYKHSGYSVFAGVGERTREGNDLYNEMKEGGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGSEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP SV S LD Sbjct: 266 PSAVGYQPTLAGEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFSHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR ++E+G YP VDPL S SR+ D +E K+ + + ++ ++++ +DI I G Sbjct: 324 VLNRKISEKGIYPAVDPLDSTSRILDPQVVGEEHYKVATGIQQVLQKYKDLQDIIAILG 382 >gi|257066503|ref|YP_003152759.1| V-type ATP synthase subunit B [Anaerococcus prevotii DSM 20548] gi|256798383|gb|ACV29038.1| H+transporting two-sector ATPase alpha/beta subunit central region [Anaerococcus prevotii DSM 20548] Length = 454 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 114/356 (32%), Positives = 187/356 (52%), Gaps = 23/356 (6%) Query: 57 DNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID 114 D +GQV++I+ D V I G EE SL D+V FH I GR N +G+PID Sbjct: 38 DFVGQVVKIDDDTVTIEVFGNTEEFSLNDIVVSFHEKPLEIPLDESILGRSFNGIGEPID 97 Query: 115 -GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 G D S+E + P A R+ +TGI ID T L GQ++ +F+GSG+ Sbjct: 98 NGGDIYSDDKYSVEGLPLNPVA--REYPRDFIQTGISSIDTLTTLIRGQKLPIFSGSGLL 155 Query: 174 KSTLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSD 225 + + + R CF + + +G + E F + + ++ VV+ Sbjct: 156 HNEIAAQIVRQAKLKTDENFCF---VFAAMGIKKDEAMFFEDAFNKAGVRDKVVMYQNLA 212 Query: 226 ESPILRKM-APLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 +SPI+ ++ AP A+T AEY + K G +VL+I+ +T ++ ++RE+++ GE+P +GYP Sbjct: 213 DSPIMERLVAPKCALTAAEYLAYKRGYHVLVIVTDMTSYSEALREVSSIRGEVPSRKGYP 272 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 ++S+L L ER G KG++T + + + D+ P+AD I +G IV++RSL+ Sbjct: 273 GYLYSDLASLYERAGMIRGVKGSVTLIPILTMPNDDITHPVADLTGYITEGQIVIDRSLS 332 Query: 344 EEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +G YPP++ L S+SRL + AD + L++ L + ++ R+I I G Sbjct: 333 NKGIYPPINVLPSLSRLMKDGIGEGYTRADHEDLMNQLYESYSKVQDVRNISQIVG 388 >gi|125654681|ref|YP_001033875.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides 2.4.1] gi|123421163|sp|Q3HKH4|ATPB2_RHOS4 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|77386341|gb|ABA81770.1| H+-transporting two-sector ATPase, alpha/beta subunit [Rhodobacter sphaeroides 2.4.1] Length = 464 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 162/305 (53%), Gaps = 8/305 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G+P D + G I+ PP + + F TGI+ Sbjct: 70 GPLRVPTGPAVLGRLLDVAGRPADLGPPIPAGAPRAPILHPAPPLAAQDARFQVFSTGIK 129 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIE 207 V+D+ PL G + +F G+G+GK+ L+ R+ +D + + + VGER RE E + Sbjct: 130 VLDLLAPLAQGGKTAMFGGAGVGKTVLVMELIRAMVSGYDGISVFAGVGERSREGHEMLG 189 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + L ++V+V +E P R PLTA+TIAE F +G NVLL++D++ RF + Sbjct: 190 EMKASGVLDRTVLVYGQMNEPPGARWRVPLTALTIAEGFRDGEGRNVLLLIDNVFRFVQA 249 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P GY ++ +E+ L ERI + + ++TA+ +V V D+ DP Sbjct: 250 GAEVSGLLGRMPSRVGYQPTLETEVAALQERI--ASVGRASVTAIEAVYVPADDFTDPAV 307 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384 ++ + +D +VL+R LA EG YP +DPLA+ S L D A +E V+ L I + Sbjct: 308 TAISAHVDSTVVLSRQLAAEGIYPAIDPLATTSVLLDPAVVGEEHARVAGRLKEAIEHYH 367 Query: 385 ETRDI 389 E RD+ Sbjct: 368 ELRDV 372 >gi|289678984|ref|ZP_06499874.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. syringae FF5] Length = 199 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 81/172 (47%), Positives = 110/172 (63%) Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG NVLL++DS+TRFA + REIA GE P +GYP SVF+ LP+L+ER G +E G+I Sbjct: 3 KGKNVLLLMDSLTRFAQAQREIALAIGEPPATKGYPPSVFARLPKLVERAGNAEAGGGSI 62 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 TA +VL +GD+ DPIADS R +LDGHIVL+R LAEEG YP +D AS+SR+ S Sbjct: 63 TAFYTVLSEGDDQQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSP 122 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + L R+++TRD+ +G Y G D D A+ P++ + +Q Sbjct: 123 EHMARAQHFKQLWSRYQQTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQ 174 >gi|219856596|ref|YP_002473718.1| hypothetical protein CKR_3253 [Clostridium kluyveri NBRC 12016] gi|219570320|dbj|BAH08304.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 466 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 168/299 (56%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N LG+PID + + + S + + P+ Q V+ + F+TGI+VID+ P Sbjct: 88 LGRLFNMLGQPIDENGEVEADEYSP--IHRPAPSFEDQSVKPEMFETGIKVIDLIAPYQK 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ ++ + + +S+ VGER RE + + E + K Sbjct: 146 GGKIGLFGGAGVGKTVIIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMQESGVINK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +V +E P R LT +T+AE+F +G +VLL +D+I RF + E++ G + Sbjct: 206 TALVFGQMNEPPGARMRVALTGLTMAEHFRDEGQDVLLFIDNIFRFTQAGSEVSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 266 PSAVGYQPTLATEMGSLQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFTHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS++E G YP VDPLAS SR+ D +E K+ S + H++ R+ E +DI I G Sbjct: 324 VLSRSISEIGIYPAVDPLASTSRILDPRVVGEEHYKVASDVKHILERYSELQDIIAILG 382 >gi|125975091|ref|YP_001039001.1| F0F1 ATP synthase subunit beta [Clostridium thermocellum ATCC 27405] gi|256003255|ref|ZP_05428247.1| ATP synthase F1, beta subunit [Clostridium thermocellum DSM 2360] gi|171769992|sp|A3DIM9|ATPB_CLOTH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|125715316|gb|ABN53808.1| ATP synthase F1 subcomplex beta subunit [Clostridium thermocellum ATCC 27405] gi|255992946|gb|EEU03036.1| ATP synthase F1, beta subunit [Clostridium thermocellum DSM 2360] gi|316939256|gb|ADU73290.1| ATP synthase F1, beta subunit [Clostridium thermocellum DSM 1313] Length = 464 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 106/303 (34%), Positives = 168/303 (55%), Gaps = 17/303 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157 GRV N LG+PIDG KGD+ + + P ++ Q+ V + +TGI+VID+ P Sbjct: 88 LGRVFNVLGEPIDG-----KGDVKATTYLPIHREAPGLDEQKPVTEILETGIKVIDLLAP 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ R+ + + + VGER RE + + Sbjct: 143 YAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFTGVGERSREGNDLWNEMNESGV 202 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATN 272 ++K+ +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ Sbjct: 203 IEKTALVFGQMNEPPGSRMRVGLTGLTMAEYFRDELGQDVLLFIDNIFRFIQAGSEVSAL 262 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + L Sbjct: 263 LGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHL 320 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391 D VL+R + E+G YP VDPL S SR+ D+ DE V+ + ++ R++E +DI Sbjct: 321 DATTVLSRHIVEQGIYPAVDPLDSTSRVLDRRIVGDEHYTVARKVQEILQRYKELQDIIA 380 Query: 392 IGG 394 I G Sbjct: 381 ILG 383 >gi|153956279|ref|YP_001397044.1| F0F1 ATP synthase subunit beta [Clostridium kluyveri DSM 555] gi|190358660|sp|A5N3H7|ATPB_CLOK5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|146349137|gb|EDK35673.1| AtpD [Clostridium kluyveri DSM 555] Length = 464 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 168/299 (56%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N LG+PID + + + S + + P+ Q V+ + F+TGI+VID+ P Sbjct: 86 LGRLFNMLGQPIDENGEVEADEYSP--IHRPAPSFEDQSVKPEMFETGIKVIDLIAPYQK 143 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ ++ + + +S+ VGER RE + + E + K Sbjct: 144 GGKIGLFGGAGVGKTVIIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMQESGVINK 203 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +V +E P R LT +T+AE+F +G +VLL +D+I RF + E++ G + Sbjct: 204 TALVFGQMNEPPGARMRVALTGLTMAEHFRDEGQDVLLFIDNIFRFTQAGSEVSALLGRI 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLATEMGSLQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFTHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS++E G YP VDPLAS SR+ D +E K+ S + H++ R+ E +DI I G Sbjct: 322 VLSRSISEIGIYPAVDPLASTSRILDPRVVGEEHYKVASDVKHILERYSELQDIIAILG 380 >gi|95929971|ref|ZP_01312711.1| ATP synthase F1, beta subunit [Desulfuromonas acetoxidans DSM 684] gi|95133940|gb|EAT15599.1| ATP synthase F1, beta subunit [Desulfuromonas acetoxidans DSM 684] Length = 468 Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 103/301 (34%), Positives = 167/301 (55%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + + DL I P +N+ + F+TGI+VID+ P G Sbjct: 90 LGRILNVVGEPVDEAGPV-EADLQWGIHRPAPEFVNQSTKVESFETGIKVIDLLAPYARG 148 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 +IG+F G+G+GK+ L+ ++ + F + + VGER RE + E+ L Sbjct: 149 GKIGLFGGAGVGKTVLIMELINNIAQQHGGFS--VFAGVGERTREGNDLWEEMKESGVLD 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L+A+T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 207 KAALVYGQMNEPPGARARVALSALTVAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 267 RIPSAVGYQPTLSTEMGELQERI--TTTDKGSITSVQAIYVPADDLTDPAPATAFAHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 VL+R +AE G YP VDPL S SR+ D +E KL + ++ R+++ +DI I Sbjct: 325 TTVLSRQIAELGIYPAVDPLDSSSRILDPQVVGEEHYKLARDVQFVLQRYKDLQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|320160783|ref|YP_004174007.1| ATP synthase subunit beta [Anaerolinea thermophila UNI-1] gi|319994636|dbj|BAJ63407.1| ATP synthase subunit beta [Anaerolinea thermophila UNI-1] Length = 466 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 168/306 (54%), Gaps = 10/306 (3%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + PS GR+ N +GKPIDG S+ + D+ I P ++ + F+TG++VID+ Sbjct: 84 VGPSTL--GRIFNVIGKPIDGKGSV-ESDIYYPIHRPAPRFEDQSTRVEVFETGLKVIDL 140 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF---DKVIISLVGERGREVREFIEDYLG 211 P G + G+F G+G GK+ ++ RS + + VGER RE + + L Sbjct: 141 IAPFTKGGKTGIFGGAGTGKTVIIMELIRSIATVHKGNSVFAGVGERTREGTQLYREMLE 200 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 +K +V+V +E +R LTA+ +AEYF +G +VLL +D+I RF S E++ Sbjct: 201 SGVMKDTVMVFGQMNEPSGVRLRVALTALAMAEYFRDQGRDVLLFIDNIFRFTMSGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+++DP + + Sbjct: 261 ALLGRMPSAVGYQPTLATEMGELQERI--TSTHQGSITSMQAVYVPADDYSDPAPVATFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD I L+R++ E+G +P VDPL S SR+ D +E + + ++ R+++ +DI Sbjct: 319 HLDATIALDRAIVEKGIFPAVDPLVSTSRILDPLIVGEEHYRTAREVQRVLQRYKDLQDI 378 Query: 390 RLIGGY 395 I G+ Sbjct: 379 IAILGF 384 >gi|283768661|ref|ZP_06341573.1| ATP synthase F1, beta subunit [Bulleidia extructa W1219] gi|283105053|gb|EFC06425.1| ATP synthase F1, beta subunit [Bulleidia extructa W1219] Length = 462 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 102/298 (34%), Positives = 165/298 (55%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ IDG S+ + D + I + P ++ +TGI+VID+ P G Sbjct: 87 GRMFNVLGETIDGLGSI-QTDKRLPIHREAPSFSEQRTTSDILETGIKVIDLLCPYAKGG 145 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ + + + +++ VGER RE + + LK +V Sbjct: 146 KIGLFGGAGVGKTVLMQELIHNIAIEHGGRSVVAGVGERTREGNDMYHEMKESGVLKNTV 205 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 + +ESP R LTA+T+AEYF + VLL +D+I RF + E++ G +P Sbjct: 206 LTYGQMNESPGARMRVALTALTMAEYFRDEERQEVLLFIDNIFRFTQAGSEVSALLGRMP 265 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ +L ERI + +KG+IT+V ++ V D+ DP + S LD +V Sbjct: 266 SAVGYQPTLATEMGQLQERI--TSTDKGSITSVQAIYVPADDLTDPAPATTFSHLDARLV 323 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+A G YP VDPL S SR+ D +E ++ + ++ R++E +DI I G Sbjct: 324 LDRSIAALGIYPAVDPLGSSSRMLDPLVIGEEHYQVARQVQEILQRYKELQDIIAILG 381 >gi|269837450|ref|YP_003319678.1| ATP synthase F1, beta subunit [Sphaerobacter thermophilus DSM 20745] gi|269786713|gb|ACZ38856.1| ATP synthase F1, beta subunit [Sphaerobacter thermophilus DSM 20745] Length = 469 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 166/309 (53%), Gaps = 8/309 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N +G+P+D D + D+ I P + + F+TG++ Sbjct: 79 GPIKVPVGPATLGRIFNVVGRPVD-DGPPPQADVYYPIHRPAPSFEEQSTDVEPFETGLK 137 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIE 207 VID+ P G + GVF G+G+GK+ ++ R+ + + + VGER RE + Sbjct: 138 VIDLIAPFTKGGKTGVFGGAGVGKTVIIMELIRNIAAEHGGYSVFTGVGERTREGTQLWG 197 Query: 208 DYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + + K+V+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 198 EMRESGVADKTVLVFGQMNEPPGARLRVGLTGLTMAEYFRDEGRDVLLFIDNIFRFVQAG 257 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ +L ERI + ++G+IT+V +V V D++ DP Sbjct: 258 SEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKRGSITSVQAVYVPADDYTDPAPA 315 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD I L RS+AE+G +P VDPLAS SR+ D E ++ + ++ R+ + Sbjct: 316 TTFAHLDATISLERSIAEQGLFPAVDPLASTSRILDPNIVGQEHYEVAREVQRVLQRYRD 375 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 376 LQDIIAILG 384 >gi|299782958|gb|ADJ40956.1| ATP synthase F1, beta subunit [Lactobacillus fermentum CECT 5716] Length = 473 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 111/328 (33%), Positives = 171/328 (52%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+P+D G M I P + + +TGI+VID+ P G Sbjct: 88 LGRVFNVLGEPVDNGPEFGPDAQRMPIHRDAPKYEDLSNTTEVLETGIKVIDLLAPYVRG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + E L+K+ Sbjct: 148 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF KG +VLL +D+I RF + E++ G + Sbjct: 208 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 268 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 L R L + G YP VDPLAS S L + + ++ + + H++ R+ E +DI I Sbjct: 326 NLERRLTQIGIYPAVDPLASTSTALTPEVVGQEHYEVATGVQHVLQRYRELQDIISI--- 382 Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420 G+D + D+ V + I +FL QS Sbjct: 383 -LGMDELSDEEKTIVARARRIQNFLSQS 409 >gi|187935792|ref|YP_001884711.1| F0F1 ATP synthase subunit beta [Clostridium botulinum B str. Eklund 17B] gi|226740181|sp|B2TK00|ATPB_CLOBB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|187723945|gb|ACD25166.1| ATP synthase F1, beta subunit [Clostridium botulinum B str. Eklund 17B] Length = 463 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 106/302 (35%), Positives = 165/302 (54%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR+ N LGKPID G++ E + + P+ Q VE + F+TGI+VID+ P Sbjct: 87 LGRLFNVLGKPIDN-----AGEVEAEEIYPIHRPAPSFKDQAVEPEMFETGIKVIDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + Sbjct: 142 YQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYHEMRESGV 201 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 + K+ +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ Sbjct: 202 IDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALL 261 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 262 GRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFSHLD 319 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 VL+RS+ E G YP VDPL S SR+ D +E + + + +++ R++E +DI I Sbjct: 320 ATTVLSRSIVELGIYPAVDPLESSSRILDPRLVGEEHYNVATKVKNILERYKELQDIIAI 379 Query: 393 GG 394 G Sbjct: 380 LG 381 >gi|184154917|ref|YP_001843257.1| F0F1 ATP synthase subunit beta [Lactobacillus fermentum IFO 3956] gi|227514481|ref|ZP_03944530.1| F0F1 ATP synthase subunit beta [Lactobacillus fermentum ATCC 14931] gi|260663296|ref|ZP_05864187.1| ATP synthase F1, beta subunit [Lactobacillus fermentum 28-3-CHN] gi|183226261|dbj|BAG26777.1| F1F0-ATPase beta subunit [Lactobacillus fermentum IFO 3956] gi|227087167|gb|EEI22479.1| F0F1 ATP synthase subunit beta [Lactobacillus fermentum ATCC 14931] gi|260552148|gb|EEX25200.1| ATP synthase F1, beta subunit [Lactobacillus fermentum 28-3-CHN] Length = 473 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 111/328 (33%), Positives = 171/328 (52%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+P+D G M I P + + +TGI+VID+ P G Sbjct: 88 LGRVFNVLGEPVDNGPEFGPDAQRMPIHRDAPKYEDLSNTTEVLETGIKVIDLLAPYVRG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + E L+K+ Sbjct: 148 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF KG +VLL +D+I RF + E++ G + Sbjct: 208 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 268 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 L R L + G YP VDPLAS S L + + ++ + + H++ R+ E +DI I Sbjct: 326 NLERRLTQIGIYPAVDPLASTSTALTPEVVGQEHYEVATGVQHVLQRYRELQDIISI--- 382 Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420 G+D + D+ V + I +FL QS Sbjct: 383 -LGMDELSDEEKTIVARARRIQNFLSQS 409 >gi|224418195|ref|ZP_03656201.1| F0F1 ATP synthase subunit beta [Helicobacter canadensis MIT 98-5491] gi|253827522|ref|ZP_04870407.1| ATP synthase F1 sector beta subunit [Helicobacter canadensis MIT 98-5491] gi|253510928|gb|EES89587.1| ATP synthase F1 sector beta subunit [Helicobacter canadensis MIT 98-5491] Length = 471 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G IDG ++L + I + P N+ + F+TGI+V+D+ P G Sbjct: 91 LGRIFNVTGDVIDGGEALNNPE-KWSIHREAPTFENQSTKTEMFETGIKVVDLLAPYSKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + L K Sbjct: 150 GKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 210 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ +L ERI + +KG+IT+V +V V D+ DP SV + LD Sbjct: 270 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR+ D + D ++ +S+ ++ ++++ +DI I G Sbjct: 328 VLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEDHYRVATSVQQVLQKYKDLQDIIAILG 386 >gi|188589828|ref|YP_001919898.1| F0F1 ATP synthase subunit beta [Clostridium botulinum E3 str. Alaska E43] gi|251780163|ref|ZP_04823083.1| ATP synthase F1, beta subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|226740180|sp|B2UZK0|ATPB_CLOBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|188500109|gb|ACD53245.1| ATP synthase F1, beta subunit [Clostridium botulinum E3 str. Alaska E43] gi|243084478|gb|EES50368.1| ATP synthase F1, beta subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 463 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 106/302 (35%), Positives = 165/302 (54%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR+ N LGKPID G++ E + + P+ Q VE + F+TGI+VID+ P Sbjct: 87 LGRLFNVLGKPIDN-----AGEVEAEEIYPIHRPAPSFKDQAVEPEMFETGIKVIDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + Sbjct: 142 YQRGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYHEMRESGV 201 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 + K+ +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ Sbjct: 202 IDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALL 261 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 262 GRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFSHLD 319 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 VL+RS+ E G YP VDPL S SR+ D +E + + + +++ R++E +DI I Sbjct: 320 ATTVLSRSIVELGIYPAVDPLESSSRILDPRLVGEEHYNVATKVKNILERYKELQDIIAI 379 Query: 393 GG 394 G Sbjct: 380 LG 381 >gi|118603005|ref|YP_904220.1| F0F1 ATP synthase subunit beta [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|166222411|sp|A1AXU2|ATPB_RUTMC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118567944|gb|ABL02749.1| ATP synthase F1 subcomplex beta subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 459 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 104/309 (33%), Positives = 165/309 (53%), Gaps = 8/309 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR++N LG+PID +G+ ++S I P + +TGI+ Sbjct: 72 GPIKVPVGVKTLGRIMNVLGEPIDNAGDIGQ-EVSWAIHRSAPAYHELAPAAELLETGIK 130 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207 VID+ P G ++G+F G+G+GK+ + R+ + + S VGER RE +F Sbjct: 131 VIDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFSGVGERTREGNDFYH 190 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + N L K +V +E P R LT +T+AEYF +G +VLL +D+I R+ + Sbjct: 191 EMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGHDVLLFIDNIYRYTLAG 250 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ SE+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 251 TEVSALLGRMPSAVGYQPTLASEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPA 308 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + + LD +VL+R +AE G YP VDPL S SR D +E V+ + ++ R++E Sbjct: 309 TTFAHLDATVVLSRQVAELGIYPAVDPLDSTSRQLDPLIVGEEHYNVARGVQSVLQRYKE 368 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 369 LKDIIAILG 377 >gi|227892670|ref|ZP_04010475.1| F0F1 ATP synthase subunit beta [Lactobacillus ultunensis DSM 16047] gi|227865541|gb|EEJ72962.1| F0F1 ATP synthase subunit beta [Lactobacillus ultunensis DSM 16047] Length = 479 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 158/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG K I + P + + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPEFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHVLQRYHELQDI 378 >gi|313141730|ref|ZP_07803923.1| F0F1 ATP synthase subunit beta [Helicobacter canadensis MIT 98-5491] gi|313130761|gb|EFR48378.1| F0F1 ATP synthase subunit beta [Helicobacter canadensis MIT 98-5491] Length = 467 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G IDG ++L + I + P N+ + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVTGDVIDGGEALNNPE-KWSIHREAPTFENQSTKTEMFETGIKVVDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + L K Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ +L ERI + +KG+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR+ D + D ++ +S+ ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEDHYRVATSVQQVLQKYKDLQDIIAILG 382 >gi|253680875|ref|ZP_04861678.1| ATP synthase F1, beta subunit [Clostridium botulinum D str. 1873] gi|253562724|gb|EES92170.1| ATP synthase F1, beta subunit [Clostridium botulinum D str. 1873] Length = 463 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 106/299 (35%), Positives = 165/299 (55%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N LGK ID D + K + I + P Q VE + F+TGI+VID+ P Sbjct: 87 LGRLFNVLGKTIDEDGNF-KAEQYYPI-HRPAPTFEEQSVEPEMFETGIKVIDLIAPYQK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E + K Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVINK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 205 TALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRI 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 265 PSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFAHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D + + + + H++ R++E +DI I G Sbjct: 323 VLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDIAIKVKHILERYKELQDIIAILG 381 >gi|331270433|ref|YP_004396925.1| ATP synthase F1 subunit beta [Clostridium botulinum BKT015925] gi|329126983|gb|AEB76928.1| ATP synthase F1, beta subunit [Clostridium botulinum BKT015925] Length = 463 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 106/299 (35%), Positives = 165/299 (55%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N LGK ID D + K + I + P Q VE + F+TGI+VID+ P Sbjct: 87 LGRLFNVLGKTIDEDGNF-KAEQYYPI-HRPAPTFEEQSVEPEMFETGIKVIDLIAPYQK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E + K Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVINK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 205 TALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRI 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 265 PSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFAHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D + + + + H++ R++E +DI I G Sbjct: 323 VLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDIAIKVKHILERYKELQDIIAILG 381 >gi|74318815|ref|YP_316555.1| F0F1 ATP synthase subunit beta [Thiobacillus denitrificans ATCC 25259] gi|118573774|sp|Q3SF66|ATPB_THIDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|74058310|gb|AAZ98750.1| F-type H+-transporting ATP synthase, beta subunit [Thiobacillus denitrificans ATCC 25259] Length = 459 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 103/298 (34%), Positives = 161/298 (54%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG P+D +G + +M I K P ++ + +TGI+VID+ P+ G Sbjct: 83 LGRIMNVLGDPVDEAGPIG-AETTMPIHRKAPAYADQAATVEILETGIKVIDLIMPIAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKKS 217 ++G+F G+G+GK+ L R+ S+ VGER RE +F + G L K Sbjct: 142 GKVGLFGGAGVGKTVTLMELIRNIAVQHSGFSVFAGVGERTREGNDFYHEMKEGGVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF +G +VLL +D+I R+ + E++ G +P Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ RL ERI + + G+IT+ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLADEMGRLQERI--TSTKTGSITSFQAVYVPADDLTDPSPATTFAHLDATLV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR+ D +E V+ + + +++E RDI I G Sbjct: 320 LSRQVAELGIYPAVDPLDSTSRILDPQVVGEEHYTVARKVQGTLQKYKELRDIIAILG 377 >gi|242310682|ref|ZP_04809837.1| ATP synthase subunit beta [Helicobacter pullorum MIT 98-5489] gi|239523080|gb|EEQ62946.1| ATP synthase subunit beta [Helicobacter pullorum MIT 98-5489] Length = 467 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G IDG + L + I P N+ + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVTGDVIDGGEELNNPE-KWSIHRAAPTFENQSTKTEMFETGIKVVDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + L K Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ +L ERI + +KG+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR+ D +E K+ +S+ ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEEHYKIATSVQQVLQKYKDLQDIIAILG 382 >gi|308274352|emb|CBX30951.1| ATP synthase subunit beta [uncultured Desulfobacterium sp.] Length = 472 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 101/301 (33%), Positives = 164/301 (54%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV+N +G+P+DG + + D M I + P + + +TG++VID+ P Sbjct: 90 AGLGRVLNVVGRPVDGLGPVSQ-DKMMPIHREAPKFTEQDTTVRVLETGVKVIDLLVPFP 148 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ ++ + IS+ VGER RE + + L Sbjct: 149 RGGKMGMFGGAGVGKTVIMMEMVHNIAMQHGGISVFAGVGERTREGNDLYHEMKDSGVLP 208 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+ ++ E P R LTA+T AEY+ +G +VL+ +D+I RF + E++ G Sbjct: 209 KAALIYGQMTEPPGARARVALTALTAAEYYRDIEGQDVLIFIDNIFRFTQAGSEVSALLG 268 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +L L ERI + +KG+ITAV V V D+ DP + + LDG Sbjct: 269 RMPSAVGYQPTLAVDLGELQERI--TSTDKGSITAVQCVYVPADDLTDPAPATTFAHLDG 326 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP VDPL S SR+ D ++ +E VS ++ ++ +++E +DI I Sbjct: 327 TVVLSRQIAELGIYPAVDPLDSTSRILDASYIGEEHYGVSRTVQQILQKYKELQDIIAIL 386 Query: 394 G 394 G Sbjct: 387 G 387 >gi|227513066|ref|ZP_03943115.1| F0F1 ATP synthase subunit beta [Lactobacillus buchneri ATCC 11577] gi|227083641|gb|EEI18953.1| F0F1 ATP synthase subunit beta [Lactobacillus buchneri ATCC 11577] Length = 487 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 112/328 (34%), Positives = 169/328 (51%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG G I + P + +TGI+VID+ P G Sbjct: 93 LGRVFNVLGEPIDGGPEFGPDAERWPIHREAPKYDELNPSTEILETGIKVIDLLEPYIRG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + IS+ VGER RE + + G L K+ Sbjct: 153 GKVGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKT 212 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF + G +VLL +D+I RF + E++ G + Sbjct: 213 AMVYGQMNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRI 272 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG IT++ +V V D++ DP + + LD Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATT 330 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 L RSL ++G YP VDPLAS S D E + + + H++ R+ E +DI I Sbjct: 331 NLERSLTQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDIISI--- 387 Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420 G+D + D+ V++ I FL QS Sbjct: 388 -LGMDELSDEEKTIVNRARRIQFFLSQS 414 >gi|227524281|ref|ZP_03954330.1| F0F1 ATP synthase subunit beta [Lactobacillus hilgardii ATCC 8290] gi|227088512|gb|EEI23824.1| F0F1 ATP synthase subunit beta [Lactobacillus hilgardii ATCC 8290] Length = 487 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 112/328 (34%), Positives = 169/328 (51%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG G I + P + +TGI+VID+ P G Sbjct: 93 LGRVFNVLGEPIDGGPEFGSDAERWPIHREAPKYDELSPSTEILETGIKVIDLLEPYIRG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + IS+ VGER RE + + G L K+ Sbjct: 153 GKVGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKT 212 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF + G +VLL +D+I RF + E++ G + Sbjct: 213 AMVYGQMNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRI 272 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG IT++ +V V D++ DP + + LD Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATT 330 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 L RSL ++G YP VDPLAS S D E + + + H++ R+ E +DI I Sbjct: 331 NLERSLTQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDIISI--- 387 Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420 G+D + D+ V++ I FL QS Sbjct: 388 -LGMDELSDEEKTIVNRARRIQFFLSQS 414 >gi|237751983|ref|ZP_04582463.1| ATP synthase subunit beta [Helicobacter winghamensis ATCC BAA-430] gi|229376550|gb|EEO26641.1| ATP synthase subunit beta [Helicobacter winghamensis ATCC BAA-430] Length = 467 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G IDG + L + I P N+ + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVTGDVIDGGEELNNPE-KWSIHRSAPTFENQSTKTEMFETGIKVVDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + L K Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ +L ERI + +KG+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR+ D +E K+ +S+ ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDPQVVGEEHYKVATSVQQVLQKYKDLQDIIAILG 382 >gi|28193539|emb|CAD48597.1| F1F0-ATPase subunit beta [Lactobacillus hilgardii] Length = 481 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 154/294 (52%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG G I + P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGEPIDGGPEFGPDAERWPIHREAPKYDELNPSTEILETGIKVIDLLEPYIRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + IS+ VGER RE + + G L K+ Sbjct: 147 GKVGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF + G +VLL +D+I RF + E++ G + Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPLAS S D E + + + H++ R+ E +DI Sbjct: 325 NLERSLTQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDI 378 >gi|227510137|ref|ZP_03940186.1| F0F1 ATP synthase subunit beta [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190342|gb|EEI70409.1| F0F1 ATP synthase subunit beta [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 487 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 154/294 (52%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG G I + P + +TGI+VID+ P G Sbjct: 93 LGRVFNVLGEPIDGGPEFGPDAERWPIHREAPKYDELNPSTEILETGIKVIDLLEPYIRG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + IS+ VGER RE + + G L K+ Sbjct: 153 GKVGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKGSGVLAKT 212 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF + G +VLL +D+I RF + E++ G + Sbjct: 213 AMVYGQMNEPPGARMRVALTGLTIAEYFRDEAGQDVLLFIDNIFRFTQAGSEVSALLGRI 272 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG IT++ +V V D++ DP + + LD Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTKKGAITSIQAVYVPADDYTDPAPATTFAHLDATT 330 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPLAS S D E + + + H++ R+ E +DI Sbjct: 331 NLERSLTQQGIYPAVDPLASTSSALDPQIVGQEHYDVATEVQHVLQRYRELQDI 384 >gi|118445003|ref|YP_878996.1| F0F1 ATP synthase subunit beta [Clostridium novyi NT] gi|171472992|sp|A0Q2Z4|ATPB_CLONN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118135459|gb|ABK62503.1| ATP synthase F1, beta subunit [Clostridium novyi NT] Length = 464 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 108/302 (35%), Positives = 165/302 (54%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR+ N LGK ID + G+ E + + P Q VE + F+TGI+VID+ P Sbjct: 88 LGRLFNVLGKTIDEE-----GEFKAEEYYPIHRPAPTFEEQSVEPEMFETGIKVIDLIAP 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E Sbjct: 143 YQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGV 202 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 + K+ +V +E P R LT +T+AEYF +G NVLL +D+I RF + E++ Sbjct: 203 INKTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQNVLLFIDNIFRFTQAGSEVSALL 262 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 GRIPSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFAHLD 320 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 VL+RS+AE G YP VDPL S SR+ D E V+ ++ H++ R++E +DI I Sbjct: 321 ATTVLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDVAINVKHILERYKELQDIIAI 380 Query: 393 GG 394 G Sbjct: 381 LG 382 >gi|224370583|ref|YP_002604747.1| F0F1 ATP synthase subunit beta [Desulfobacterium autotrophicum HRM2] gi|223693300|gb|ACN16583.1| AtpD2 [Desulfobacterium autotrophicum HRM2] Length = 472 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 102/302 (33%), Positives = 163/302 (53%), Gaps = 9/302 (2%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GRV+N +GKP+DG + + ++ M I P ++ + +TG++V+D+ P Sbjct: 89 AASLGRVLNVVGKPVDGLGPISQENM-MPIHRLAPSFTSQDTTVRVLETGVKVVDLLVPF 147 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ ++ + IS+ VGER RE + + L Sbjct: 148 PRGGKMGMFGGAGVGKTVIMMEMVNNIAMQHGGISVFGGVGERTREGNDLYHEMKDSGVL 207 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K +V E P R L+A+T AEYF +G +VLL +D+I RF + E++ Sbjct: 208 PKCSLVYGQMTEPPGARARVALSALTCAEYFRDIEGQDVLLFIDNIFRFTQAGSEVSATL 267 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ ++ L ERI + +KG+ITAV V V D+ DP + + LD Sbjct: 268 GRMPSAVGYQPTLAVDMGALQERI--TSTDKGSITAVQCVYVPADDLTDPAPATTFAHLD 325 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIRLI 392 G +VL+R +AE G YP VDPL S SR+ D A+ +E V+ + + +++E +DI I Sbjct: 326 GTVVLSRQIAELGIYPAVDPLDSTSRILDAAYVGEEHYNVARVVQQTLQKYKELQDIIAI 385 Query: 393 GG 394 G Sbjct: 386 LG 387 >gi|270291020|ref|ZP_06197243.1| ATP synthase F1, beta subunit [Pediococcus acidilactici 7_4] gi|304385296|ref|ZP_07367641.1| ATP synthase F1 sector beta subunit [Pediococcus acidilactici DSM 20284] gi|270280416|gb|EFA26251.1| ATP synthase F1, beta subunit [Pediococcus acidilactici 7_4] gi|304328503|gb|EFL95724.1| ATP synthase F1 sector beta subunit [Pediococcus acidilactici DSM 20284] Length = 469 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 102/295 (34%), Positives = 165/295 (55%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 GRV N LG+ IDG LG D+ + + + PP + + +TGI+VID+ P Sbjct: 87 LGRVFNVLGETIDGGKELGP-DIKRDPIHRDPPEYDELNPSTEILETGIKVIDLLAPYIR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E L++ Sbjct: 146 GGKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKESGVLER 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAE+F +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVYGQMNEPPGARMRVALTGLTIAEHFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 266 IPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPLAS S D +E ++ S + H++ R++E +DI Sbjct: 324 TNLERSLTQQGIYPAVDPLASTSTALDPEIVGEEHYEVASEVQHVLQRYKELQDI 378 >gi|168185932|ref|ZP_02620567.1| ATP synthase F1, beta subunit [Clostridium botulinum C str. Eklund] gi|169295978|gb|EDS78111.1| ATP synthase F1, beta subunit [Clostridium botulinum C str. Eklund] Length = 464 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 108/302 (35%), Positives = 165/302 (54%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR+ N LGK ID + G+ E + + P Q VE + F+TGI+VID+ P Sbjct: 88 LGRLFNVLGKTIDEE-----GEFKAEEYYPIHRPAPTFEEQSVEPEMFETGIKVIDLVAP 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E Sbjct: 143 YQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGV 202 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 + K+ +V +E P R LT +T+AEYF +G NVLL +D+I RF + E++ Sbjct: 203 INKTALVFGQMNEPPGARMRVALTGLTMAEYFRDQGQNVLLFIDNIFRFTQAGSEVSALL 262 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 GRIPSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFAHLD 320 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 VL+RS+AE G YP VDPL S SR+ D E V+ ++ H++ R++E +DI I Sbjct: 321 ATTVLSRSIAELGIYPAVDPLESTSRILDPRVIGQEHYDVAINVKHILERYKELQDIIAI 380 Query: 393 GG 394 G Sbjct: 381 LG 382 >gi|309806269|ref|ZP_07700282.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 03V1-b] gi|312873828|ref|ZP_07733871.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2052A-d] gi|308167253|gb|EFO69419.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 03V1-b] gi|311090610|gb|EFQ49011.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2052A-d] Length = 489 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 10/306 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGI 149 G + GRV N LG PIDG + D+ + + K P N E+ +TGI Sbjct: 85 GPISVPVGKATLGRVFNVLGDPIDGGPEIAD-DIQRDGIHKDAPKYNDLSTSEEILETGI 143 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-F 205 +VID+ P G ++G+F G+G+GK+T++ + + IS+ VGER RE + + Sbjct: 144 KVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLY 203 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 E L K+ +V +E P R LT +TIAEYF +G +VLL +D+I RF Sbjct: 204 FEMKASGVLAKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRF 383 + + LD L R L E+G YP VDPL S S D + D ++ + H++ R+ Sbjct: 322 PATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEVVGKDHYEVAVQVQHILQRY 381 Query: 384 EETRDI 389 +E +DI Sbjct: 382 QELQDI 387 >gi|309809937|ref|ZP_07703785.1| ATP synthase F1, beta subunit [Lactobacillus iners SPIN 2503V10-D] gi|308169725|gb|EFO71770.1| ATP synthase F1, beta subunit [Lactobacillus iners SPIN 2503V10-D] Length = 489 Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 10/306 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGI 149 G + GRV N LG PIDG + D+ + + K P N E+ +TGI Sbjct: 85 GPISVPVGKATLGRVFNVLGAPIDGGPEIAD-DVQRDGIHKDAPKYNDLSTSEEILETGI 143 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-F 205 +VID+ P G ++G+F G+G+GK+T++ + + IS+ VGER RE + + Sbjct: 144 KVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLY 203 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 E L K+ +V +E P R LT +TIAEYF +G +VLL +D+I RF Sbjct: 204 FEMKASGVLAKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRF 383 + + LD L R L E+G YP VDPL S S D + D ++ + H++ R+ Sbjct: 322 PATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEVVGKDHYEVAVQVQHILQRY 381 Query: 384 EETRDI 389 +E +DI Sbjct: 382 QELQDI 387 >gi|38906121|gb|AAR27813.1| ATP synthase beta chain [Lactobacillus crispatus] Length = 371 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 157/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG K I + P + + +TGI+VID+ P G Sbjct: 28 LGRVFNVLGQPIDGGPEFSKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 87 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 88 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 147 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 148 AMVFGQMNEPXGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 207 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 265 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 266 NLERSLVEQGIYPAVDPLESTSSALDPEVVGQEHYEVATRVQHVLQRYHELQDI 319 >gi|302191117|ref|ZP_07267371.1| F0F1 ATP synthase subunit beta [Lactobacillus iners AB-1] gi|309803208|ref|ZP_07697305.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 11V1-d] gi|312871593|ref|ZP_07731685.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 3008A-a] gi|308164716|gb|EFO66966.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 11V1-d] gi|311092818|gb|EFQ51170.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 3008A-a] Length = 480 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 10/306 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGI 149 G + GRV N LG PIDG + D+ + + K P N E+ +TGI Sbjct: 76 GPISVPVGKATLGRVFNVLGDPIDGGPEIAD-DVQRDGIHKDAPKYNDLSTSEEILETGI 134 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-F 205 +VID+ P G ++G+F G+G+GK+T++ + + IS+ VGER RE + + Sbjct: 135 KVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLY 194 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 E L K+ +V +E P R LT +TIAEYF +G +VLL +D+I RF Sbjct: 195 FEMKASGVLAKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRF 383 + + LD L R L E+G YP VDPL S S D + D ++ + H++ R+ Sbjct: 313 PATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEVVGKDHYEVAVQVQHILQRY 372 Query: 384 EETRDI 389 +E +DI Sbjct: 373 QELQDI 378 >gi|148543702|ref|YP_001271072.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri DSM 20016] gi|184153112|ref|YP_001841453.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri JCM 1112] gi|194468265|ref|ZP_03074251.1| ATP synthase F1, beta subunit [Lactobacillus reuteri 100-23] gi|227363319|ref|ZP_03847448.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri MM2-3] gi|227544493|ref|ZP_03974542.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri CF48-3A] gi|300909319|ref|ZP_07126780.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri SD2112] gi|325682073|ref|ZP_08161591.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri MM4-1A] gi|166990370|sp|A5VIR1|ATPB_LACRD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740212|sp|B2G691|ATPB_LACRJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|148530736|gb|ABQ82735.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus reuteri DSM 20016] gi|183224456|dbj|BAG24973.1| ATP synthase beta subunit [Lactobacillus reuteri JCM 1112] gi|194453118|gb|EDX42016.1| ATP synthase F1, beta subunit [Lactobacillus reuteri 100-23] gi|227071626|gb|EEI09920.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri MM2-3] gi|227185516|gb|EEI65587.1| F0F1 ATP synthase subunit beta [Lactobacillus reuteri CF48-3A] gi|300893184|gb|EFK86543.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri SD2112] gi|324978717|gb|EGC15666.1| ATP synthase F1 sector beta subunit [Lactobacillus reuteri MM4-1A] Length = 475 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 111/328 (33%), Positives = 171/328 (52%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+P+D G M I P + + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGEPVDNGPKFGPDAKRMPIHRDAPKYDDLNNATEILETGIKVIDLLAPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + E L+K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF KG +VLL +D+I RF + E++ G + Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 L R L + G YP VDPLAS S L + + ++ + + H++ R+ E +DI I Sbjct: 325 NLERRLTQIGIYPAVDPLASTSTALTPEIVGKEHYEVATQVQHVLQRYHELQDIISI--- 381 Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420 G+D + D+ V + I +FL QS Sbjct: 382 -LGMDELSDEEKTIVARARRIQNFLSQS 408 >gi|83591194|ref|YP_431203.1| F0F1 ATP synthase subunit beta [Moorella thermoacetica ATCC 39073] gi|118573697|sp|Q2RFX9|ATPB_MOOTA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|83574108|gb|ABC20660.1| ATP synthase F1 subcomplex beta subunit [Moorella thermoacetica ATCC 39073] Length = 462 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 165/301 (54%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID + + + I P +Q + +TGI+V+D+ P Sbjct: 83 ATLGRLFNVLGEPIDNQGPVETTE-RLPIHRPAPSFEEQQPSTEVLETGIKVVDLLAPYA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ R+ ++ + S VGER RE + ++E L+ Sbjct: 142 KGGKIGLFGGAGVGKTVLIMELIRNIAYEHGGFSVFSGVGERTREGNDLYLEMKESGVLE 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF ++G +VLL +D+I RF + E++ G Sbjct: 202 KTALVFGQMNEPPGARLRVGLTGLTMAEYFRDAEGQDVLLFIDNIFRFVQAGSEVSALLG 261 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 262 RMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA 319 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+R +AE G YP VDPL S SR+ D + + ++ + ++ R++E +DI I Sbjct: 320 TTVLSRQIAELGIYPAVDPLDSTSRILDPRVLGEEHYQVARGVQQVLQRYKELQDIIAIL 379 Query: 394 G 394 G Sbjct: 380 G 380 >gi|259501675|ref|ZP_05744577.1| ATP synthase F1 sector subunit beta [Lactobacillus iners DSM 13335] gi|309805661|ref|ZP_07699702.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 09V1-c] gi|309808087|ref|ZP_07702005.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 01V1-a] gi|312871960|ref|ZP_07732042.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2062A-h1] gi|312874636|ref|ZP_07734660.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2053A-b] gi|315653738|ref|ZP_07906658.1| ATP synthase F1 sector beta subunit [Lactobacillus iners ATCC 55195] gi|325911661|ref|ZP_08174068.1| ATP synthase F1, beta subunit [Lactobacillus iners UPII 143-D] gi|325912991|ref|ZP_08175364.1| ATP synthase F1, beta subunit [Lactobacillus iners UPII 60-B] gi|329921084|ref|ZP_08277607.1| ATP synthase F1, beta subunit [Lactobacillus iners SPIN 1401G] gi|259166960|gb|EEW51455.1| ATP synthase F1 sector subunit beta [Lactobacillus iners DSM 13335] gi|308165021|gb|EFO67263.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 09V1-c] gi|308168689|gb|EFO70789.1| ATP synthase F1, beta subunit [Lactobacillus iners LactinV 01V1-a] gi|311089866|gb|EFQ48286.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2053A-b] gi|311092537|gb|EFQ50899.1| ATP synthase F1, beta subunit [Lactobacillus iners LEAF 2062A-h1] gi|315489100|gb|EFU78742.1| ATP synthase F1 sector beta subunit [Lactobacillus iners ATCC 55195] gi|325476427|gb|EGC79586.1| ATP synthase F1, beta subunit [Lactobacillus iners UPII 143-D] gi|325477671|gb|EGC80810.1| ATP synthase F1, beta subunit [Lactobacillus iners UPII 60-B] gi|328934991|gb|EGG31480.1| ATP synthase F1, beta subunit [Lactobacillus iners SPIN 1401G] Length = 489 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 104/306 (33%), Positives = 163/306 (53%), Gaps = 10/306 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGI 149 G + GRV N LG PIDG + D+ + + K P N E+ +TGI Sbjct: 85 GPISVPVGKATLGRVFNVLGDPIDGGPEIAD-DVQRDGIHKDAPKYNDLSTSEEILETGI 143 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-F 205 +VID+ P G ++G+F G+G+GK+T++ + + IS+ VGER RE + + Sbjct: 144 KVIDLLEPYVRGGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLY 203 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 E L K+ +V +E P R LT +TIAEYF +G +VLL +D+I RF Sbjct: 204 FEMKASGVLAKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGLDVLLFIDNIFRFTQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRF 383 + + LD L R L E+G YP VDPL S S D + D ++ + H++ R+ Sbjct: 322 PATTFAHLDATTNLERRLVEQGIYPAVDPLESTSSALDPEVVGKDHYEVAVQVQHILQRY 381 Query: 384 EETRDI 389 +E +DI Sbjct: 382 QELQDI 387 >gi|323466857|gb|ADX70544.1| Proton-translocating ATPase beta subunit [Lactobacillus helveticus H10] Length = 479 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 157/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG K I P + + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPDFPKDHPREGIHKDAPKYADLTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESSSSALDPEVVGREHYEVATRVQHVLQRYHELQDI 378 >gi|223983270|ref|ZP_03633463.1| hypothetical protein HOLDEFILI_00743 [Holdemania filiformis DSM 12042] gi|223964763|gb|EEF69082.1| hypothetical protein HOLDEFILI_00743 [Holdemania filiformis DSM 12042] Length = 467 Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 102/298 (34%), Positives = 162/298 (54%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG IDG L + + + I P + + +TGI+VID+ P G Sbjct: 89 GRMFNVLGDEIDGLGELPEPNKKLPIHRAAPSFEEQLTSAEILETGIKVIDLLCPYARGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ + + +++ VGER RE + + L K+V Sbjct: 149 KIGLFGGAGVGKTVLMQELIHNIAKEHGGMSVVAGVGERTREGNDMYHEMKDSGVLDKTV 208 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +ESP R L+ +T+AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 209 LVYGQMNESPGARMRVALSGLTMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ +L ERI + ++G+IT+V ++ V D+ DP + S LD V Sbjct: 269 SAVGYQPTLATEMGQLQERI--TSTKRGSITSVQAIYVPADDLTDPAPATTFSHLDAKTV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+A G YP VDPL S SR+ D DE ++ + L+ R++E +DI I G Sbjct: 327 LDRSIAALGIYPAVDPLESSSRMLDPLVVGDEHYEVARGVQQLLQRYKELQDIIAILG 384 >gi|254447640|ref|ZP_05061106.1| ATP synthase F1, beta subunit [gamma proteobacterium HTCC5015] gi|198262983|gb|EDY87262.1| ATP synthase F1, beta subunit [gamma proteobacterium HTCC5015] Length = 457 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 112/333 (33%), Positives = 175/333 (52%), Gaps = 11/333 (3%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G+ E +S G V + G P GR++N LG+PID + K D + Sbjct: 48 VVRTIAMGVSEGLSRGVNVENTGSAISVPVGQGTLGRIMNVLGEPIDHAGDV-KSDETRA 106 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I + P ++ + +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 107 IHQEAPSYEDQSASSELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 166 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242 V VGER RE +F + N L K +V +E P R LT +T+A Sbjct: 167 EHSGFSVFAG-VGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMA 225 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E+F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + Sbjct: 226 EFFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TST 283 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + G+IT+V +V V D+ DP + + LD +VLNRS+AE G YP VDPL S SR D Sbjct: 284 KTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLNRSIAELGIYPAVDPLDSTSRQLD 343 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE ++ ++ + R++E +DI I G Sbjct: 344 PLVVGDEHYEIARAVQGTLQRYKELKDIIAILG 376 >gi|307547034|ref|YP_003899513.1| F0F1 ATP synthase subunit beta [Halomonas elongata DSM 2581] gi|307219058|emb|CBV44328.1| F0F1 ATP synthase subunit beta [Halomonas elongata DSM 2581] Length = 458 Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 104/300 (34%), Positives = 162/300 (54%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + M I K P ++ E+ +TGI+VID+ P Sbjct: 80 ATLGRIMNVLGEPIDEAGEIGEQE-RMPIHRKAPGYADQAATEELLETGIKVIDLVCPFA 138 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 139 KGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMQESNVLD 198 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G Sbjct: 199 KVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 258 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 259 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 316 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL RS+AE G YP +DPL S SR D +E K+ + ++ R++E +DI I G Sbjct: 317 VVLARSIAELGIYPAIDPLDSTSRQLDPLVIGEEHYKVARGVQGVLQRYKELKDIIAILG 376 >gi|153940743|ref|YP_001389519.1| F0F1 ATP synthase subunit beta [Clostridium botulinum F str. Langeland] gi|170756277|ref|YP_001779784.1| F0F1 ATP synthase subunit beta [Clostridium botulinum B1 str. Okra] gi|190358657|sp|B1IE34|ATPB_CLOBK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358658|sp|A7G9Q9|ATPB_CLOBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|152936639|gb|ABS42137.1| ATP synthase F1, beta subunit [Clostridium botulinum F str. Langeland] gi|169121489|gb|ACA45325.1| ATP synthase F1, beta subunit [Clostridium botulinum B1 str. Okra] gi|295317619|gb|ADF97996.1| ATP synthase F1, beta subunit [Clostridium botulinum F str. 230613] Length = 463 Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 106/302 (35%), Positives = 166/302 (54%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LGKPIDG G+ + E + + P+ Q VE F+TGI+VID+ P Sbjct: 86 LGRLFNVLGKPIDG-----AGEFTSEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAP 140 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E Sbjct: 141 YQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGV 200 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L+K+ +V +E P R LT +T++EYF +G +VLL +D+I RF + E++ Sbjct: 201 LEKTALVFGQMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALL 260 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 261 GRIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLD 318 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 VL+R++ E G YP VDPL S SR+ D +E V+ + +++ R+ E +DI I Sbjct: 319 ATTVLSRAITELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAI 378 Query: 393 GG 394 G Sbjct: 379 LG 380 >gi|289668190|ref|ZP_06489265.1| type III secretion system ATPase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 277 Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 3/216 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSL 119 +V+ + D+ + P G +S V GR P GRV++ LG+P DG ++ Sbjct: 63 EVVGFSRDLALLAPFGELVGLSRETRVIGLGRPLAVPVGPALLGRVLDGLGEPADGLGAV 122 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 + + + + ++ P M R+ +E+ TG+R++D L GQR+G+FA +G+GKSTL+ Sbjct: 123 -ECETWVRVQAQAPDPMRRRLIEQPMPTGVRIVDGLMTLGEGQRMGIFAAAGVGKSTLMG 181 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I L+GERGREVREFIE LG D L +SVVV ATSD S I R A Sbjct: 182 MFARGTQCDVNVIVLIGERGREVREFIEMILGEDGLSRSVVVCATSDRSSIERAKAAYVG 241 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 IAEYF +G VLL++DS+TRFA + REI G Sbjct: 242 TAIAEYFRDQGMRVLLMMDSLTRFARAQREIGLAGG 277 >gi|254479260|ref|ZP_05092603.1| ATP synthase F1, beta subunit [Carboxydibrachium pacificum DSM 12653] gi|214034798|gb|EEB75529.1| ATP synthase F1, beta subunit [Carboxydibrachium pacificum DSM 12653] Length = 461 Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 166/301 (55%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID LG+ D+ + K PP+ Q + +TGI+VID+ TP Sbjct: 84 LGRMFNVLGQPID---ELGEVKDVKYMPIHKKPPSFEEQNPATEILETGIKVIDLLTPYP 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ R+ + I + VGER RE E ++E + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFAGVGERSREGNELWLEMHEAGVID 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ V +E P R L +TIAEYF + +VLL +D+I RF + E++ G Sbjct: 201 KTAFVFGQMNEPPGARMRVGLAGLTIAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 261 RMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+RS+AE G YP VDPL S SR+ + +E V+ + ++ R++E +DI I Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARKVQEILQRYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|297544153|ref|YP_003676455.1| ATP synthase F1 subunit beta [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841928|gb|ADH60444.1| ATP synthase F1, beta subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 461 Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 109/301 (36%), Positives = 163/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID LG+ D+ M I K PP + + +TGI+VID+ TP Sbjct: 84 LGRMFNVLGQPID---ELGEVNDVKYMSIHRKAPPFEEQSPATEILETGIKVIDLLTPYP 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ R+ + I + VGER RE E + L Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGERSREGNELWHEMQESGVLD 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ V +E P R L +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 201 KAAFVFGQMNEPPGARMRVALAGLTMAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +EL L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 261 RMPSAVGYQPTLATELGLLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+RS+AE G YP VDPL S SR+ + +E V+ + ++ R++E +DI I Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYSVARKVQEILERYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|289577864|ref|YP_003476491.1| ATP synthase F1 subunit beta [Thermoanaerobacter italicus Ab9] gi|289527577|gb|ADD01929.1| ATP synthase F1, beta subunit [Thermoanaerobacter italicus Ab9] Length = 461 Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 109/301 (36%), Positives = 163/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGK-GDLS-MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID LG+ D+ M I K PP + + +TGI+VID+ TP Sbjct: 84 LGRMFNVLGQPID---ELGEVNDVKYMSIHRKAPPFEEQSPATEILETGIKVIDLLTPYP 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ R+ + I + VGER RE E + L Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGERSREGNELWHEMQESGVLD 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ V +E P R L +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 201 KTAFVFGQMNEPPGARMRVALAGLTMAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +EL L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 261 RMPSAVGYQPTLATELGLLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+RS+AE G YP VDPL S SR+ + +E V+ + ++ R++E +DI I Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYSVARKVQEILERYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|20807130|ref|NP_622301.1| F0F1 ATP synthase subunit beta [Thermoanaerobacter tengcongensis MB4] gi|81848163|sp|Q8RC15|ATPB_THETN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|20515625|gb|AAM23905.1| F0F1-type ATP synthase beta subunit [Thermoanaerobacter tengcongensis MB4] Length = 461 Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 166/301 (55%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID LG+ D+ + K PP+ Q + +TGI+VID+ TP Sbjct: 84 LGRMFNVLGQPID---ELGEVKDVKYMPIHKKPPSFEEQNPATEILETGIKVIDLLTPYP 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ R+ + I + VGER RE E ++E + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFAGVGERSREGNELWLEMHEAGVID 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ V +E P R L +TIAEYF + +VLL +D+I RF + E++ G Sbjct: 201 KTAFVFGQMNEPPGARMRVGLAGLTIAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 261 RMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+RS+AE G YP VDPL S SR+ + +E V+ + ++ R++E +DI I Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARKVQEILQRYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|300811317|ref|ZP_07091814.1| ATP synthase F1, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497681|gb|EFK32706.1| ATP synthase F1, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 479 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG I + P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPEFPAAHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E V++ + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDI 378 >gi|170759729|ref|YP_001785485.1| F0F1 ATP synthase subunit beta [Clostridium botulinum A3 str. Loch Maree] gi|190358659|sp|B1KSS8|ATPB_CLOBM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|169406718|gb|ACA55129.1| ATP synthase F1, beta subunit [Clostridium botulinum A3 str. Loch Maree] Length = 463 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 165/301 (54%), Gaps = 14/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR+ N LGKPIDG +S E + + P+ Q VE F+TGI+VID+ P Sbjct: 86 LGRLFNVLGKPIDGAGEF----ISEESYPIHRSAPSFEEQSVEPEIFETGIKVIDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E L Sbjct: 142 QKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVL 201 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +K+ +V +E P R LT +T++EYF +G +VLL +D+I RF + E++ G Sbjct: 202 EKTALVFGQMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLG 261 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 RIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDA 319 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+RS+ E G YP VDPL S SR+ D +E V+ + +++ R+ E +DI I Sbjct: 320 TTVLSRSITELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAIL 379 Query: 394 G 394 G Sbjct: 380 G 380 >gi|325125459|gb|ADY84789.1| ATP synthase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 479 Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG I + P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAYLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E V++ + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDI 378 >gi|116513801|ref|YP_812707.1| F0F1 ATP synthase subunit beta [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|122275429|sp|Q04BA3|ATPB_LACDB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116093116|gb|ABJ58269.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 479 Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG I + P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAYLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E V++ + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDI 378 >gi|116493065|ref|YP_804800.1| F0F1 ATP synthase subunit beta [Pediococcus pentosaceus ATCC 25745] gi|122265471|sp|Q03EL4|ATPB_PEDPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116103215|gb|ABJ68358.1| ATP synthase F1 subcomplex beta subunit [Pediococcus pentosaceus ATCC 25745] Length = 469 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 100/295 (33%), Positives = 164/295 (55%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 GRV N LG IDG LG D+ + + + PP + + +TGI+VID+ P Sbjct: 87 LGRVFNVLGDTIDGGKELGP-DIKRDPIHRDPPDYDELNPSTEVLETGIKVIDLLAPYIR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + G L++ Sbjct: 146 GGKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKGSGVLER 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAE+F +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVYGQMNEPPGARMRVALTGLTIAEHFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 266 IPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L R+L ++G YP VDPLAS S D +E ++ + + H++ R++E +DI Sbjct: 324 TNLERALTQQGIYPAVDPLASTSTALDPQIVGEEHYEVATEVQHVLQRYKELQDI 378 >gi|28625013|emb|CAD56145.1| F1F0-ATPase subunit beta [Pediococcus damnosus] Length = 470 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 102/295 (34%), Positives = 161/295 (54%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG ID + G + + + PP + + +TGI+VID+ P Sbjct: 87 LGRVFNVLGDTIDNGEEFGP-EAKRNPIHRDPPKYDELNPSMEILETGIKVIDLLAPYIR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E L+K Sbjct: 146 GGKVGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLEK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVYGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 266 IPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPLAS S D A +E K+ + + H++ R+ E +DI Sbjct: 324 TNLERSLTQQGIYPAVDPLASTSSALDPAVVGEEHYKVATDVQHVLQRYRELQDI 378 >gi|193216472|ref|YP_001999714.1| F0F1 ATP synthase subunit beta [Mycoplasma arthritidis 158L3-1] gi|193001795|gb|ACF07010.1| ATP synthase beta subunit [Mycoplasma arthritidis 158L3-1] Length = 503 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 167/299 (55%), Gaps = 14/299 (4%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 R+ N LG+PID G + ++++ + + PP+ Q+ + F+TGI+VID+ P G Sbjct: 122 RMFNVLGEPID----TGAIEFNVKMPIHRTPPSYEEQKSTLEIFETGIKVIDLLMPYVKG 177 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + +S+ VGER RE + + L K+ Sbjct: 178 GKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFAGVGERTREGNDLYHEMKASGVLDKT 237 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R AP TA+T+AEYF + G +VLL +D+I RF + E++ G + Sbjct: 238 ALVFGQMNEPPGARMRAPFTALTMAEYFRDTMGQDVLLFIDNIFRFTQAGSEVSALLGRM 297 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + KG++T+V ++ V D+ DP + + LD Sbjct: 298 PSAVGYQPTLATEMGQLQERI--TSTNKGSVTSVQAIYVPADDLTDPAPATTFTHLDAKT 355 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +A G YP +DPLAS SR+ D + + + +++ RF+E +DI I G Sbjct: 356 VLDRDIAALGIYPAIDPLASNSRMMDPNVIGLEHYNIARKVQNILQRFKELQDIIAILG 414 >gi|78043094|ref|YP_361338.1| F0F1 ATP synthase subunit beta [Carboxydothermus hydrogenoformans Z-2901] gi|118573518|sp|Q3A946|ATPB_CARHZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|77995209|gb|ABB14108.1| ATP synthase F1, beta subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 473 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 164/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PIDG + + D I PP + + +TGI+VID+ P G Sbjct: 93 LGRLLNVLGEPIDGKGPV-ESDHYYPIHRPAPPLEEQSTRAEILETGIKVIDLLVPFLKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKKS 217 +IG+F G+G+GK+ ++ + IS+ VGER RE + + L K+ Sbjct: 152 GKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLDKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 ++V +E P +R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 212 IMVFGQMNEPPGVRLRVGLTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + KG+IT+V +V V D+ DP + + LD + Sbjct: 272 PSAVGYQPTLATEMGQLQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFAHLDATV 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D +E ++ + ++ R++E +DI I G Sbjct: 330 VLSRQIAELGIYPAVDPLDSTSRILDPHIVGEEHYQVARGVQRVLQRYKELQDIIAILG 388 >gi|148378162|ref|YP_001252703.1| ATP synthase F1, beta subunit [Clostridium botulinum A str. ATCC 3502] gi|153930870|ref|YP_001382563.1| F0F1 ATP synthase subunit beta [Clostridium botulinum A str. ATCC 19397] gi|153935797|ref|YP_001386115.1| F0F1 ATP synthase subunit beta [Clostridium botulinum A str. Hall] gi|168177489|ref|ZP_02612153.1| ATP synthase F1, beta subunit [Clostridium botulinum NCTC 2916] gi|168182234|ref|ZP_02616898.1| ATP synthase F1, beta subunit [Clostridium botulinum Bf] gi|237793475|ref|YP_002861027.1| ATP synthase F1, beta subunit [Clostridium botulinum Ba4 str. 657] gi|190358654|sp|A7FQH9|ATPB_CLOB1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358656|sp|A5HY52|ATPB_CLOBH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|259585441|sp|C3KYJ3|ATPB_CLOB6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|148287646|emb|CAL81711.1| ATP synthase beta chain [Clostridium botulinum A str. ATCC 3502] gi|152926914|gb|ABS32414.1| ATP synthase F1, beta subunit [Clostridium botulinum A str. ATCC 19397] gi|152931711|gb|ABS37210.1| ATP synthase F1, beta subunit [Clostridium botulinum A str. Hall] gi|182671405|gb|EDT83379.1| ATP synthase F1, beta subunit [Clostridium botulinum NCTC 2916] gi|182674532|gb|EDT86493.1| ATP synthase F1, beta subunit [Clostridium botulinum Bf] gi|229260674|gb|ACQ51707.1| ATP synthase F1, beta subunit [Clostridium botulinum Ba4 str. 657] gi|322804426|emb|CBZ01976.1| ATP synthase beta chain [Clostridium botulinum H04402 065] Length = 463 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 165/301 (54%), Gaps = 14/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR+ N LGKPIDG +S E + + P+ Q VE F+TGI+VID+ P Sbjct: 86 LGRLFNVLGKPIDGAGEF----ISEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E L Sbjct: 142 QKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVL 201 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +K+ +V +E P R LT +T++EYF +G +VLL +D+I RF + E++ G Sbjct: 202 EKTALVFGQMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLG 261 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 RIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDA 319 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+RS+ E G YP VDPL S SR+ D +E V+ + +++ R+ E +DI I Sbjct: 320 TTVLSRSITELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAIL 379 Query: 394 G 394 G Sbjct: 380 G 380 >gi|313123407|ref|YP_004033666.1| fof1 membrane-bound proton-translocating ATPase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279970|gb|ADQ60689.1| FoF1 membrane-bound proton-translocating ATPase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 479 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG I + P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGSEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E V++ + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEVVGQEHYDVATRVQHILQRYRELQDI 378 >gi|32265928|ref|NP_859960.1| F0F1 ATP synthase subunit beta [Helicobacter hepaticus ATCC 51449] gi|81835987|sp|Q7VJ21|ATPB_HELHP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|32261977|gb|AAP77026.1| FoF1-type ATP synthase [Helicobacter hepaticus ATCC 51449] Length = 466 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G IDG L + DL I + P N+ + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVTGDVIDGGKPL-ESDLKWPIHREAPSFENQSTRTEMFETGIKVVDLIAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 146 GKVGLFGGAGVGKTVVIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKEGGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGSEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLAGEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADE-KKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++E+G YP VDPL S SR+ D +E K+ + + ++ ++++ +DI I G Sbjct: 324 VLDRKISEKGIYPAVDPLGSTSRILDPQIVGEEHHKVATGVQQVLQKYKDLQDIIAILG 382 >gi|325684414|gb|EGD26582.1| ATP synthase F1 sector beta subunit [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 490 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG I + P + +TGI+VID+ P G Sbjct: 98 LGRVFNVLGQPIDGGSEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 157 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 158 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 217 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 218 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 277 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 278 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 335 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E V++ + H++ R+ E +DI Sbjct: 336 NLERSLVEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQDI 389 >gi|325479324|gb|EGC82420.1| ATP synthase ab C terminal domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 454 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 110/356 (30%), Positives = 187/356 (52%), Gaps = 23/356 (6%) Query: 57 DNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID 114 D +GQV++I+ D V I G EE SL D+V FH I + GR N +G+PID Sbjct: 38 DFVGQVVKIDDDTVTIEVFGNTEEFSLNDIVVSFHEKPLEIPLNESILGRTFNGIGEPID 97 Query: 115 GDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 + +L S+E + P A R+ +TGI ID T L GQ++ +F+GSG+ Sbjct: 98 NGGYIYSDELFSVEGLPLNPVA--REYPRDFIQTGISSIDTLTTLIRGQKLPIFSGSGLS 155 Query: 174 KSTLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSD 225 + + + R CF + + +G + E F + + ++ VV+ Sbjct: 156 HNEIAAQIVRQAKLKTDEDFCF---VFAAMGIKKDEAMFFEDAFNKAGVRDKVVMYQNLA 212 Query: 226 ESPILRKM-APLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYP 283 +SPI+ ++ AP A+T AEY + K +VL+I+ +T ++ ++RE+++ GE+P +GYP Sbjct: 213 DSPIMERLVAPKCALTAAEYLAYKKHYHVLVIITDMTSYSEALREVSSIRGEVPSRKGYP 272 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 ++S+L L ER G E G++T + + + D+ P+AD I +G IV++RSL+ Sbjct: 273 GYLYSDLASLYERAGMIEGVNGSVTLIPILTMPNDDITHPVADLTGYITEGQIVIDRSLS 332 Query: 344 EEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +G YPP++ L S+SRL + D + L++ + + ++ R+I I G Sbjct: 333 NKGIYPPINVLPSLSRLMKDGIGEGYTRGDHEDLMNQIYESYSKVQDVRNISQIVG 388 >gi|307265810|ref|ZP_07547361.1| ATP synthase F1, beta subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|306919205|gb|EFN49428.1| ATP synthase F1, beta subunit [Thermoanaerobacter wiegelii Rt8.B1] Length = 461 Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 109/301 (36%), Positives = 163/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID LG K M I K PP + + +TGI+VID+ TP Sbjct: 84 LGRMFNVLGQPID---ELGEVKDVKYMSIHRKAPPFEEQSPATEILETGIKVIDLLTPYP 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ R+ + I + VGER RE E + E + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGERSREGNELWHEMHESGVID 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ V +E P R L +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 201 KTAFVFGQMNEPPGARMRVGLAGLTMAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +EL L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 261 RMPSAVGYQPTLATELGLLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+RS+AE G YP VDPL S SR+ + +E V+ + ++ R++E +DI I Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARKVQEILQRYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|255022753|ref|ZP_05294739.1| flagellum-specific ATP synthase [Listeria monocytogenes FSL J1-208] Length = 258 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 102/260 (39%), Positives = 151/260 (58%), Gaps = 9/260 (3%) Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTA 238 M AR+ D +I LVGERGREV++F+ LG+ L+KSV+V ATSDES +++ A A Sbjct: 1 MIARNAKADINVIGLVGERGREVKDFLRKDLGEEGLRKSVIVAATSDESHLMQLRAAKLA 60 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 +IAE+F +G VLL++DS+TRFA + R + +LP+ G + S + +LLER G Sbjct: 61 TSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG-GKTLLMESYMKKLLERSG 119 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 ++ G+IT + +VLVDGD+ N P+ D R ILDGHIVL R LA + YP +D L+SVS Sbjct: 120 KTKN--GSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTRELATKNHYPAIDVLSSVS 177 Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD-LILDKAVHQVPIIYDFL 417 R+ ++ + K S + + ++E +G D + + + I+ FL Sbjct: 178 RVMEEIVPESQWKSASKIREWMSIYQENELYFKLGTIEQTSDNAAIFTSKEKSYFIHQFL 237 Query: 418 KQSPSDLSSEDVFQEITKKL 437 KQ L E+V + T KL Sbjct: 238 KQ----LRDENVTLDETSKL 253 >gi|226947380|ref|YP_002802471.1| ATP synthase F1, beta subunit [Clostridium botulinum A2 str. Kyoto] gi|254808140|sp|C1FQP5|ATPB_CLOBJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226842430|gb|ACO85096.1| ATP synthase F1, beta subunit [Clostridium botulinum A2 str. Kyoto] Length = 463 Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 107/301 (35%), Positives = 165/301 (54%), Gaps = 14/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR+ N LGKPIDG +S E + + P+ Q VE F+TGI+VID+ P Sbjct: 86 LGRLFNVLGKPIDGAGEF----ISEESYPIHRPAPSFEEQSVEPEIFETGIKVIDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E L Sbjct: 142 EKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVL 201 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 +K+ +V +E P R LT +T++EYF +G +VLL +D+I RF + E++ G Sbjct: 202 EKTALVFGQMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLG 261 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 RIPSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDA 319 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+RS+ E G YP VDPL S SR+ D +E V+ + +++ R+ E +DI I Sbjct: 320 TTVLSRSITELGIYPAVDPLESSSRMLDPRIIGEEHYEVAIKVKNILERYRELQDIIAIL 379 Query: 394 G 394 G Sbjct: 380 G 380 >gi|162419059|ref|YP_001604854.1| flagellum-specific ATP synthase [Yersinia pestis Angola] gi|162351874|gb|ABX85822.1| flagellum-specific ATP synthase [Yersinia pestis Angola] Length = 389 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 118/362 (32%), Positives = 165/362 (45%), Gaps = 63/362 (17%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVF---HWGRFRISPSACWCGRVINALGKPIDGDD 117 QV+ + DI Y+ P + G VF G I S W GRVIN LG+P+DG Sbjct: 60 QVVGFDRDITYLMPFKHPGGVLGGARVFPSEQDGELLIGDS--WLGRVINGLGEPLDGKG 117 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 LG + + ++ P + R+ V+ G+ I+ + GQR+G+ AGSG+GKS L Sbjct: 118 QLGGSTPLQQQLPQIHP-LQRRAVDTPLDVGVNAINGLLTIGKGQRVGLMAGSGVGKSVL 176 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLT 237 L M R VVV A +DESP++R A Sbjct: 177 LGMITRY----------------------------TQADVVVVAAPADESPLMRIKATEL 208 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 IA Y+ KG +VLL++DS+TR+A + REIA + GE P +GYP S FS +PRL E Sbjct: 209 CHAIATYYRDKGHDVLLLVDSLTRYAMAQREIALSLGEPPATKGYPPSAFSIIPRLAESA 268 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 G S G +TA+ +V LAE G YP +D S+ Sbjct: 269 GNSSG-NGTMTAIYTV----------------------------LAEAGHYPAIDISQSI 299 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFL 417 SR + + + K S L + + + +GGY G D + D+AVH P I FL Sbjct: 300 SRCMSQVIGSQQAKAASLLKQCYADYMAIKPLIPLGGYVAGADPMADQAVHYYPAITQFL 359 Query: 418 KQ 419 +Q Sbjct: 360 RQ 361 >gi|187251924|ref|YP_001876406.1| F0F1 ATP synthase subunit beta [Elusimicrobium minutum Pei191] gi|186972084|gb|ACC99069.1| ATP synthase F1, beta subunit [Elusimicrobium minutum Pei191] Length = 484 Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 111/313 (35%), Positives = 167/313 (53%), Gaps = 20/313 (6%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDI 154 P C GR++N LG PID + K D M I + PP + Q+ F+TGI+V+D+ Sbjct: 79 PVGEGCRGRLMNVLGAPIDYAGEI-KTDKKMPI-HREPPTLEEQKTTPEIFETGIKVVDL 136 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL 210 P G ++G+F G+G+GK+ L+ + AR V VGER RE + D Sbjct: 137 LAPYMKGGKVGLFGGAGVGKTVLIMELINNVAREHSGSSVF-GGVGERSREGNDLWLDMK 195 Query: 211 GDNLK-------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 G L K+V+V +E P R LTA+T AEYF KG +VLL LD+I R+ Sbjct: 196 GAELADGSTVLDKTVLVFGQMNEPPGARAKVALTALTQAEYFRDEKGQDVLLFLDNIFRY 255 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D+ D Sbjct: 256 VLANSEVSALLGRMPSAVGYQPTLNTEIGQLQERI--TSTNKGSITSIQAVYVPADDLTD 313 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIH 381 P S + LD VL+RSL E G YP VDPL S SR+ D + + ++ + ++ Sbjct: 314 PGVASTFTHLDATTVLSRSLVELGIYPAVDPLESTSRILDPRVLGEEHYQVAQGVRKILQ 373 Query: 382 RFEETRDIRLIGG 394 R+++ +D+ I G Sbjct: 374 RYKDLQDLIAILG 386 >gi|297205778|ref|ZP_06923173.1| ATP synthase F1 sector beta subunit [Lactobacillus jensenii JV-V16] gi|297148904|gb|EFH29202.1| ATP synthase F1 sector beta subunit [Lactobacillus jensenii JV-V16] Length = 480 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PID I + P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +ESP R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNESPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D +E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDI 378 >gi|332561378|ref|ZP_08415693.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides WS8N] gi|332274177|gb|EGJ19494.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides WS8N] Length = 460 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 161/305 (52%), Gaps = 8/305 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G+P D + I+ PP + + F TGI+ Sbjct: 66 GPLRVPTGPAVLGRLLDVAGRPADLGPPIPAEAPRAPILHPAPPLAAQDARFQVFSTGIK 125 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIE 207 V+D+ PL G + +F G+G+GK+ L+ R+ +D + + + VGER RE E + Sbjct: 126 VLDLLAPLAQGGKTAMFGGAGVGKTVLVMELIRAMVSGYDGISVFAGVGERSREGHEMLG 185 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + L ++V+V +E P R PLTA+TIAE F +G NVLL++D++ RF + Sbjct: 186 EMKASGVLDRTVLVYGQMNEPPGARWRVPLTALTIAEGFRDGEGRNVLLLIDNVFRFVQA 245 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P GY ++ +E+ L ERI + + ++TA+ +V V D+ DP Sbjct: 246 GAEVSGLLGRMPSRVGYQPTLETEVAALQERI--ASVGRASVTAIEAVYVPADDFTDPAV 303 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384 ++ + +D +VL+R LA EG YP +DPLA+ S L D A +E V+ L I + Sbjct: 304 TAISAHVDSTVVLSRQLAAEGIYPAIDPLATTSVLLDPAVVGEEHARVAGRLKEAIEHYH 363 Query: 385 ETRDI 389 E RD+ Sbjct: 364 ELRDV 368 >gi|221634553|ref|YP_002523241.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides KD131] gi|221163426|gb|ACM04388.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides KD131] Length = 460 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 161/305 (52%), Gaps = 8/305 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G+P D + I+ PP + + F TGI+ Sbjct: 66 GPLRVPTGPAVLGRLLDVAGRPADLGPPIPAEAPRAPILHPAPPLAAQDARFQVFSTGIK 125 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIE 207 V+D+ PL G + +F G+G+GK+ L+ R+ +D + + + VGER RE E + Sbjct: 126 VLDLLAPLAQGGKTAMFGGAGVGKTVLVMELIRAMVSGYDGISVFAGVGERSREGHEMLG 185 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + L ++V+V +E P R PLTA+TIAE F +G NVLL++D++ RF + Sbjct: 186 EMKASGVLDRTVLVYGQMNEPPGARWRVPLTALTIAEGFRDGEGRNVLLLIDNVFRFVQA 245 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P GY ++ +E+ L ERI + + ++TA+ +V V D+ DP Sbjct: 246 GAEVSGLLGRMPSRVGYQPTLETEVAALQERI--ASVGRASVTAIEAVYVPADDFTDPAV 303 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384 ++ + +D +VL+R LA EG YP +DPLA+ S L D A +E V+ L I + Sbjct: 304 TAISAHVDSTVVLSRQLAAEGIYPAIDPLATTSVLLDPAVVGEEHARVAGRLKEAIEHYH 363 Query: 385 ETRDI 389 E RD+ Sbjct: 364 ELRDV 368 >gi|38906127|gb|AAR27816.1| ATP synthase beta chain [Lactobacillus acidophilus] Length = 371 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 157/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG + K I + P + + +TGI+VID+ P G Sbjct: 28 LGRVFNVLGQPIDGGPAFPKDHPREGIHKEAPKYEDLTTSREILETGIKVIDLLEPYVRG 87 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+ +T++ + + IS+ VGER RE + + E L K+ Sbjct: 88 GKVGLFGGAGVATTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 147 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 148 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 207 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPSTTFAHLDATT 265 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +DI Sbjct: 266 NLERSLVEQGIYPAVDPLESSSSALDPEVVGQEHYEVATRVQHVLQRYHELQDI 319 >gi|126464835|ref|YP_001041811.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides ATCC 17029] gi|190358238|sp|A3PS59|ATPB2_RHOS1 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|126106650|gb|ABN79175.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides ATCC 17029] Length = 464 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 161/305 (52%), Gaps = 8/305 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G+P D + I+ PP + + F TGI+ Sbjct: 70 GPLRVPTGPAVLGRLLDVAGRPADLGPPIPAEAPRAPILHPAPPLAAQDARFQVFSTGIK 129 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIE 207 V+D+ PL G + +F G+G+GK+ L+ R+ +D + + + VGER RE E + Sbjct: 130 VLDLLAPLAQGGKTAMFGGAGVGKTVLVMELIRAMVSGYDGISVFAGVGERSREGHEMLG 189 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + L ++V+V +E P R PLTA+TIAE F +G NVLL++D++ RF + Sbjct: 190 EMKASGVLDRTVLVYGQMNEPPGARWRVPLTALTIAEGFRDGEGRNVLLLIDNVFRFVQA 249 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P GY ++ +E+ L ERI + + ++TA+ +V V D+ DP Sbjct: 250 GAEVSGLLGRMPSRVGYQPTLETEVAALQERI--ASVGRASVTAIEAVYVPADDFTDPAV 307 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384 ++ + +D +VL+R LA EG YP +DPLA+ S L D A +E V+ L I + Sbjct: 308 TAISAHVDSTVVLSRQLAAEGIYPAIDPLATTSVLLDPAVVGEEHARVAGRLKEAIEHYH 367 Query: 385 ETRDI 389 E RD+ Sbjct: 368 ELRDV 372 >gi|308184872|ref|YP_003929005.1| F0F1 ATP synthase subunit beta [Helicobacter pylori SJM180] gi|308060792|gb|ADO02688.1| F0F1 ATP synthase subunit beta [Helicobacter pylori SJM180] Length = 469 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID +SL K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLESL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|332637150|ref|ZP_08416013.1| F0F1 ATP synthase subunit beta [Weissella cibaria KACC 11862] Length = 466 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/297 (33%), Positives = 162/297 (54%), Gaps = 10/297 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GRV N LG P+DG ++LG+ D+ + + + PA ++ +TGI+VID+ P Sbjct: 85 ATLGRVFNVLGNPVDGGEALGE-DVPRDPIHRDAPAYDQLATSTEILETGIKVIDLLAPY 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + L Sbjct: 144 IRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMKDSGVL 203 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K++ +V +E P R LT +TIAE+F G +VLL +D+I RF + E++ Sbjct: 204 KQTAMVYGQMNEPPGARMRVALTGLTIAEHFRDVNGQDVLLFIDNIFRFTQAGSEVSALL 263 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 264 GRIPSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAVYVPADDYTDPAPATTFAHLD 321 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPLAS S L + + ++ + + + R+ E +DI Sbjct: 322 ATTNLERSLTQQGIYPAVDPLASTSTALTPEIVGQEHYEVATEVQRTLQRYRELQDI 378 >gi|150015308|ref|YP_001307562.1| F0F1 ATP synthase subunit beta [Clostridium beijerinckii NCIMB 8052] gi|190358655|sp|A6LQH6|ATPB_CLOB8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|149901773|gb|ABR32606.1| ATP synthase F1, beta subunit [Clostridium beijerinckii NCIMB 8052] Length = 463 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 164/306 (53%), Gaps = 24/306 (7%) Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVID 153 GR+ N LGKPID GD +E+ + P P+ Q VE + F+TGI+V+D Sbjct: 87 LGRLFNVLGKPIDKCGD---------IEVKQEYPIHRPAPSFKDQSVEPEMFETGIKVVD 137 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL 210 + P G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 138 LLAPYQRGGKIGLFGGAGVGKTVLIQELINNIAKQHGGLSVFTGVGERSREGNDLYHEMR 197 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 + K+ +V +E P R LT +T+AEYF KG +VLL +D+I R+ + E+ Sbjct: 198 ESGVIDKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRYTQAGSEV 257 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G P A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + Sbjct: 258 SALLGRTPSAVGYQPTLATEMGALQERI--TSTVNGSITSVQAVYVPADDLTDPAPATTF 315 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D +E K+ + + H++ ++++ +D Sbjct: 316 AHLDATTVLSRGIAELGIYPAVDPLESTSRILDPRIVGEEHYKVAADVKHVLEKYKQLQD 375 Query: 389 IRLIGG 394 I I G Sbjct: 376 IIAILG 381 >gi|206890586|ref|YP_002248090.1| ATP synthase F1, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|226740687|sp|B5YI24|ATPB_THEYD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|206742524|gb|ACI21581.1| ATP synthase F1, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 473 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+P+D + D I P + + F+TG++V D+ P G Sbjct: 92 LGRIINVIGEPVDEMGPIQAQD-KYPIHISAPEFTEQSPTTQQFETGVKVFDLLVPFVRG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + +S+ VGER RE + ++E L + Sbjct: 151 GKMGMFGGAGVGKTVIIMEMIHNIAMKHGGVSVFAGVGERTREGNDLYLEMKHSGVLPQV 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P +R LTA+T+AEYF +G +VL+ +D+I R+ + E++ G +P Sbjct: 211 ALVYGQMNEPPGVRARIALTALTVAEYFRDQGQDVLIFIDNIFRYTLAGSEVSALLGRMP 270 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + KG+IT++ ++ V D+ DP +V + LDG +V Sbjct: 271 SAVGYQPTLSTEMGALQERI--TTTAKGSITSMQAIYVPADDLTDPAVAAVFAHLDGTVV 328 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR+ D DE V+ + ++ R++E +DI I G Sbjct: 329 LSRQIAELGIYPAVDPLDSTSRILDPRVVGDEHYQVARGVQSVLQRYKELQDIIAILG 386 >gi|158520620|ref|YP_001528490.1| F0F1 ATP synthase subunit beta [Desulfococcus oleovorans Hxd3] gi|254808147|sp|A8ZUA1|ATPB_DESOH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|158509446|gb|ABW66413.1| ATP synthase F1, beta subunit [Desulfococcus oleovorans Hxd3] Length = 467 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 102/302 (33%), Positives = 162/302 (53%), Gaps = 9/302 (2%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GRV+N +GKP+DG + + + +M I P + +TGI+VID+ P Sbjct: 89 AASLGRVLNVVGKPVDGLGPVSR-EKTMPIHRPAPLFTEQDTSVNVLETGIKVIDLLVPF 147 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ ++ + IS+ VGER RE + + L Sbjct: 148 PRGGKMGLFGGAGVGKTVIMMEMVNNIAMQHGGISVFAGVGERTREGNDLYHEMKDSGVL 207 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K+ ++ E P R L+A+T AEYF +G +VL+ +D+I RF + E++ Sbjct: 208 PKAALIYGQMTEPPGARARVALSALTCAEYFRDVEGQDVLIFIDNIFRFTQAGAEVSALL 267 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +L L ERI + +KG+ITAV V V D+ DP + + LD Sbjct: 268 GRIPSAVGYQPTLAVDLGGLQERI--TSTDKGSITAVQCVYVPADDLTDPAPATTFAHLD 325 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 G +VL+R +AE G YP VDPL S SR+ D A+ +E ++ + + +++E +DI I Sbjct: 326 GTVVLSRQIAELGIYPSVDPLDSTSRILDAAYIGEEHYRVAREVQQTLQKYKELQDIIAI 385 Query: 393 GG 394 G Sbjct: 386 LG 387 >gi|28625015|emb|CAD56146.1| F1F0-ATPase subunit beta [Pediococcus parvulus] Length = 470 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 100/295 (33%), Positives = 163/295 (55%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + G ++ + + PP + + +TGI+VID+ P Sbjct: 87 LGRVFNVLGETIDNGEKFGP-EVKRNPIHRDPPKYDDLNPSMEILETGIKVIDLLAPYIR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E L+K Sbjct: 146 GGKVGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLEK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVYGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 266 IPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPLAS S D + +E K+ + + H++ R+ E +DI Sbjct: 324 TNLERSLTQQGIYPAVDPLASTSSALDPSVVGEEHYKVATDVQHVLQRYRELQDI 378 >gi|261838460|gb|ACX98226.1| ATP synthase F1 beta chain [Helicobacter pylori 51] Length = 469 Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + S ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMISEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|157164647|ref|YP_001466345.1| F0F1 ATP synthase subunit beta [Campylobacter concisus 13826] gi|190358267|sp|A7ZC37|ATPB_CAMC1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|112800107|gb|EAT97451.1| ATP synthase F1, beta subunit [Campylobacter concisus 13826] Length = 465 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G ID + + D I PP + + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVVGDLIDEGEGI-NFDKHWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNRS+AE+G YP VDPL S SR+ D + AD K+ + ++ ++++ +DI I G Sbjct: 324 VLNRSIAEKGIYPAVDPLDSTSRMLDPQILGADHYKVARGVQAVLQKYKDLQDIIAILG 382 >gi|226315033|ref|YP_002774929.1| ATP synthase beta chain [Brevibacillus brevis NBRC 100599] gi|254808134|sp|C0Z776|ATPB_BREBN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226097983|dbj|BAH46425.1| ATP synthase beta chain [Brevibacillus brevis NBRC 100599] Length = 469 Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 112/331 (33%), Positives = 177/331 (53%), Gaps = 16/331 (4%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GRV N LG+PID + LG+ D I K P +++ + +TGI+VID+ P Sbjct: 89 AITLGRVFNVLGEPIDLQE-LGQVDRRDPIHRKAPEFVDQATTVEILETGIKVIDLLAPY 147 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ + + + IS+ VGER RE + + L Sbjct: 148 IKGGKIGLFGGAGVGKTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMKDAGVL 207 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 208 PKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDEEGRDVLLFVDNIFRFTQAGSEVSALL 267 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 268 GRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLD 325 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L RS+AE G +P VDPLAS SR LA + + S+ ++ R++E +DI I Sbjct: 326 ATTNLERSIAELGIFPAVDPLASTSRALAPDIVGQEHYDVARSVQKILQRYKELQDIIAI 385 Query: 393 GGYRPGVDLILD---KAVHQVPIIYDFLKQS 420 G+D + D + V + I FL QS Sbjct: 386 ----LGMDELSDDDKQVVGRARRIQRFLSQS 412 >gi|224543580|ref|ZP_03684119.1| hypothetical protein CATMIT_02789 [Catenibacterium mitsuokai DSM 15897] gi|224523507|gb|EEF92612.1| hypothetical protein CATMIT_02789 [Catenibacterium mitsuokai DSM 15897] Length = 466 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 102/298 (34%), Positives = 165/298 (55%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG IDG D L + + M I P +++ + +TGI+V+D+ P G Sbjct: 89 GRMFNVLGHSIDGKDELTE-EKHMPIHRSAPTFADQRTETEILETGIKVVDLICPFIKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ F + + +S+ VGER RE + + E L K+ Sbjct: 148 KIGLFGGAGVGKTVLIQEFINNIATEHNGLSVFAGVGERSREGNDLYYEMKESGVLDKTT 207 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L+A+T+AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 208 LVFGQMNEPPGSRLRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRVP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +E+ +L ERI + ++G+IT+V +V V D+ DP + + LD +V Sbjct: 268 SQAGYQPTLATEMGQLQERI--TSTKQGSITSVQAVYVPADDMTDPAPATTFTHLDARVV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+A G YP VDPL S SR D E ++ +T ++ +++E +DI I G Sbjct: 326 LDRSIAALGIYPAVDPLNSSSRGLDPNVVGKEHYEVAHGVTQMLQKYQELQDIIAILG 383 >gi|104773795|ref|YP_618775.1| F0F1 ATP synthase subunit beta [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|118573689|sp|Q1GAW5|ATPB_LACDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|103422876|emb|CAI97538.1| H+ transporting ATPase / ATP synthase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 479 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PIDG I + P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGQPIDGGPEFPADHPRSGIHKEAPKYDELTTSREILETGIKVIDLLEPYLRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAYLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E V++ + H++ R+ E ++I Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEIVGQEHYDVATRVQHILQRYRELQNI 378 >gi|302871779|ref|YP_003840415.1| ATP synthase F1, beta subunit [Caldicellulosiruptor obsidiansis OB47] gi|302574638|gb|ADL42429.1| ATP synthase F1, beta subunit [Caldicellulosiruptor obsidiansis OB47] Length = 467 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 105/310 (33%), Positives = 167/310 (53%), Gaps = 9/310 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N LG+PID + D I P + + F+TGI+ Sbjct: 76 GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206 VID+ P G +IG+F G+G+GK+ L+ R+ + I + VGER RE + ++ Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E ++K+V+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ ++ R++ Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 373 ELQDIIAILG 382 >gi|295425476|ref|ZP_06818169.1| ATP synthase F1 sector beta subunit [Lactobacillus amylolyticus DSM 11664] gi|295064815|gb|EFG55730.1| ATP synthase F1 sector beta subunit [Lactobacillus amylolyticus DSM 11664] Length = 484 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 100/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PID K I + P + +TGI+VID+ P G Sbjct: 92 LGRVFNVLGQPIDNGPEFPKDHPREGIHKEAPKYDELTTSREILETGIKVIDLLEPYVRG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 152 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLSKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 212 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 272 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +D+ Sbjct: 330 NLERSLVEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHVLQRYHELQDV 383 >gi|1361451|pir||B64244 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain - Mycoplasma genitalium Length = 382 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 106/298 (35%), Positives = 167/298 (56%), Gaps = 13/298 (4%) Query: 105 VINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PIDG + L K LS+ + PPA + Q F+TGI+VID+ TP G Sbjct: 1 MFNVLGEPIDGKEPLPKKPKLSIH---RNPPAFDEQPNTVDIFETGIKVIDLLTPYVRGG 57 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E G + K+V Sbjct: 58 KIGLFGGAGVGKTVLVQELIHNIAKEHSGLSVFAGVGERTREGNDLYYEMIQGGVIDKTV 117 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LTA+T+AEYF + NVLL +D+I RF + E++ G +P Sbjct: 118 LVFGQMNEPPGARMRVALTALTMAEYFRDHDNQNVLLFIDNIFRFTQAGSEVSALLGRMP 177 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V ++ V D+ DP + + LD V Sbjct: 178 SAVGYQPTLAIEMGKLQERIAST--KTGSITSVQAIYVPADDLTDPAPATTFTHLDAKTV 235 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A G +P ++PL S SRL D + + K+ + +++ RF E +DI I G Sbjct: 236 LDRNIAALGIFPAINPLESTSRLLDPSVVGINHYKVALGVQNILQRFAELQDIIAILG 293 >gi|312622353|ref|YP_004023966.1| ATP synthase F1 subunit beta [Caldicellulosiruptor kronotskyensis 2002] gi|312202820|gb|ADQ46147.1| ATP synthase F1, beta subunit [Caldicellulosiruptor kronotskyensis 2002] Length = 467 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 105/310 (33%), Positives = 167/310 (53%), Gaps = 9/310 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N LG+PID + D I P + + F+TGI+ Sbjct: 76 GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206 VID+ P G +IG+F G+G+GK+ L+ R+ + I + VGER RE + ++ Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E ++K+V+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ ++ R++ Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 373 ELQDIIAILG 382 >gi|312127526|ref|YP_003992400.1| ATP synthase F1 subunit beta [Caldicellulosiruptor hydrothermalis 108] gi|312135222|ref|YP_004002560.1| ATP synthase F1 subunit beta [Caldicellulosiruptor owensensis OL] gi|311775273|gb|ADQ04760.1| ATP synthase F1, beta subunit [Caldicellulosiruptor owensensis OL] gi|311777545|gb|ADQ07031.1| ATP synthase F1, beta subunit [Caldicellulosiruptor hydrothermalis 108] Length = 467 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 105/310 (33%), Positives = 167/310 (53%), Gaps = 9/310 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N LG+PID + D I P + + F+TGI+ Sbjct: 76 GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206 VID+ P G +IG+F G+G+GK+ L+ R+ + I + VGER RE + ++ Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E ++K+V+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ ++ R++ Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 373 ELQDIIAILG 382 >gi|225569926|ref|ZP_03778951.1| hypothetical protein CLOHYLEM_06021 [Clostridium hylemonae DSM 15053] gi|225161396|gb|EEG74015.1| hypothetical protein CLOHYLEM_06021 [Clostridium hylemonae DSM 15053] Length = 474 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 162/300 (54%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ IDG +++ G EI K P + + +TGI+VID+ TP G Sbjct: 96 LGRLFNVLGETIDGKEAIDSGSRRWEIHRKAPGFEEQSPAVEVLETGIKVIDLLTPYAKG 155 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216 +IG+F G+G+GK+ L+ + + I + VGER RE + + +G++ L K Sbjct: 156 GKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWTE-MGESGVLDK 214 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G Sbjct: 215 TALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFVQAGSEVSALLGR 274 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G++T+V +V V D+ DP + S LD Sbjct: 275 MPSAVGYQPTLAQEMGALQERIAST--KNGSVTSVQAVYVPADDLTDPAPATTFSHLDAT 332 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E ++ + ++ +++E +DI I G Sbjct: 333 TVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYRVARKVQEILQKYKELQDIIAILG 392 >gi|146296975|ref|YP_001180746.1| F0F1 ATP synthase subunit beta [Caldicellulosiruptor saccharolyticus DSM 8903] gi|189081328|sp|A4XKX0|ATPB_CALS8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|145410551|gb|ABP67555.1| ATP synthase F1 subcomplex beta subunit [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 467 Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 104/310 (33%), Positives = 167/310 (53%), Gaps = 9/310 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N LG+PID + D I P + + F+TGI+ Sbjct: 76 GPIKVPVGRGTLGRIFNVLGQPIDNKGEVQATDY-WPIHRSAPSFEEQVPAVEIFETGIK 134 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206 VID+ P G +IG+F G+G+GK+ L+ R+ + I + VGER RE + ++ Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E ++K+V+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT+V ++ V D+ DP Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKRGSITSVQAIYVPADDLTDPAP 312 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ ++ R++ Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 373 ELQDIIAILG 382 >gi|312793601|ref|YP_004026524.1| ATP synthase F1 subunit beta [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180741|gb|ADQ40911.1| ATP synthase F1, beta subunit [Caldicellulosiruptor kristjanssonii 177R1B] Length = 467 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 105/310 (33%), Positives = 167/310 (53%), Gaps = 9/310 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N LG+PID + D I P + + F+TGI+ Sbjct: 76 GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206 VID+ P G +IG+F G+G+GK+ L+ R+ + I + VGER RE + ++ Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E ++K+V+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ ++ R++ Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 373 ELQDIIAILG 382 >gi|227529637|ref|ZP_03959686.1| H(+)-transporting two-sector ATPase [Lactobacillus vaginalis ATCC 49540] gi|227350427|gb|EEJ40718.1| H(+)-transporting two-sector ATPase [Lactobacillus vaginalis ATCC 49540] Length = 474 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 111/328 (33%), Positives = 169/328 (51%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+P+D G M I P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGEPVDNGPKFGPDAKRMPIHRDAPKYDELNNNTEILETGIKVIDLLAPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + E L+K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF KG +VLL +D+I RF + E++ G + Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 L R L + G YP VDPLAS S L + + ++ + + H++ R+ E +DI I Sbjct: 325 NLERRLTQIGIYPAVDPLASTSTALTPEIVGKEHYEVATEVQHVLQRYHELQDIISI--- 381 Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420 G+D + D V + I +FL QS Sbjct: 382 -LGMDELSDDEKVIVARARRIQNFLSQS 408 >gi|326391019|ref|ZP_08212568.1| ATP synthase F1, beta subunit [Thermoanaerobacter ethanolicus JW 200] gi|325992964|gb|EGD51407.1| ATP synthase F1, beta subunit [Thermoanaerobacter ethanolicus JW 200] Length = 461 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 108/301 (35%), Positives = 163/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID LG K M I K PP + + +TGI+VID+ TP Sbjct: 84 LGRMFNVLGQPID---ELGEVKDVKYMSIHRKAPPFEEQSPATEILETGIKVIDLLTPYP 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ R+ + I + VGER RE E + E + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELIRNVAIEHGGYSIFTGVGERSREGNELWHEMHESGVID 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ V +E P R L +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 201 KTAFVFGQMNEPPGARMRVGLAGLTMAEYFRDEEHQDVLLFIDNIFRFVQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ ++L L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 261 RMPSAVGYQPTLATDLGLLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+RS+AE G YP VDPL S SR+ + +E V+ + ++ R++E +DI I Sbjct: 319 TTVLSRSIAEMGIYPAVDPLDSTSRILEPHIVGEEHYYVARKVQEILQRYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|169832274|ref|YP_001718256.1| F0F1 ATP synthase subunit beta [Candidatus Desulforudis audaxviator MP104C] gi|226740188|sp|B1I6J7|ATPB_DESAP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|169639118|gb|ACA60624.1| ATP synthase F1, beta subunit [Candidatus Desulforudis audaxviator MP104C] Length = 472 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 110/304 (36%), Positives = 170/304 (55%), Gaps = 19/304 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQ--RVEKGFKTGIRVIDIFT 156 GR+I+ LG PIDG GD+ E + + PA+ Q +VE+ +TG++VID+ Sbjct: 92 LGRLIDVLGMPIDG-----LGDIKAETYYPIHRPAPALVDQSTKVEQ-LETGLKVIDLLV 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212 P G +IG+F G+G+GK+ ++ + IS+ VGER RE E + E Sbjct: 146 PFMKGGKIGMFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNELLLEMTEAG 205 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 L K+++V +E P R LT + +AEYF +G +VL+ +D+I RFA + E++ Sbjct: 206 VLDKTMMVFGQMNEPPGCRLRVGLTGLCLAEYFRDEEGADVLIFIDNIFRFAQAGTEVSA 265 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT+V +V V D+ DP + + Sbjct: 266 LLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSITSVQAVYVPADDLTDPAPANTFAH 323 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LDG +VL+R +AE G YP VDPL SVSR+ D E V+ + ++ R++E +DI Sbjct: 324 LDGTVVLSRQIAELGIYPAVDPLDSVSRILDPNVVGQEHYQVARGVQKVLQRYKELQDII 383 Query: 391 LIGG 394 I G Sbjct: 384 AILG 387 >gi|296134373|ref|YP_003641620.1| ATP synthase F1, beta subunit [Thermincola sp. JR] gi|296032951|gb|ADG83719.1| ATP synthase F1, beta subunit [Thermincola potens JR] Length = 474 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 166/299 (55%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG ID + + D+ I P +++ + +TGI+V+D+ P G Sbjct: 94 LGRLMNVLGDSIDHKGPI-ESDVRYPIHRPAPAFEDQETATEILETGIKVVDLLAPYAKG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-GDNLKKS 217 +IG+F G+G+GK+ L+ R+ ++ + + VGER RE + + + G + K+ Sbjct: 153 GKIGLFGGAGVGKTVLIMELIRNIAYEHGGFSVFAGVGERTREGNDLYHEMIAGGVIDKT 212 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE+F +G +VLL +D+I RF + E++ G + Sbjct: 213 AMVFGQMNEPPGARLRVALTGLTVAEFFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRM 272 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATAFAHLDATT 330 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D +E ++ + +++ R++E +DI I G Sbjct: 331 VLSRQIAELGIYPAVDPLDSTSRVLDPRIVGEEHYRVARDVQNILQRYKELQDIIAILG 389 >gi|108759590|ref|YP_635037.1| F0F1 ATP synthase subunit beta [Myxococcus xanthus DK 1622] gi|118573702|sp|Q1CX36|ATPB_MYXXD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|108463470|gb|ABF88655.1| ATP synthase F1, beta subunit [Myxococcus xanthus DK 1622] Length = 481 Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 105/309 (33%), Positives = 166/309 (53%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N G+P+D + + + + PP Q V + F+TGI+VID+ P Sbjct: 93 ATLGRILNVTGEPVDEMGPVKAQEYWS--IHRAPPPFTEQDVRVQMFETGIKVIDLLAPY 150 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ LL R+ ++ + + VGER RE + + Sbjct: 151 TRGGKIGLFGGAGVGKTVLLQELIRNVAVERGGFSVFAGVGERTREGNDLYHEMQDTKVI 210 Query: 211 -GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 DNL+ S V+V +E P R L+A+T+AEYF +G +VLL +D+I RF + Sbjct: 211 QTDNLEASQAVLVYGQMNEPPGARARVALSALTMAEYFRDVEGRDVLLFVDNIFRFTQAG 270 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + KG+IT+V ++ V D+ DP Sbjct: 271 SEVSALLGRIPSAVGYQPTLATEMGGLQERI--TSTTKGSITSVQAIYVPADDLTDPAPA 328 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFEE 385 + + LD VLNRS+AE +P VDPL S SR+ D A A+ + + ++ R++E Sbjct: 329 TAFAHLDATTVLNRSIAELAIFPAVDPLDSTSRILDPAVIGAEHYGVARKVQGILQRYKE 388 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 389 LQDIIAILG 397 >gi|303245589|ref|ZP_07331872.1| ATP synthase F1, beta subunit [Desulfovibrio fructosovorans JJ] gi|302492852|gb|EFL52717.1| ATP synthase F1, beta subunit [Desulfovibrio fructosovorans JJ] Length = 470 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 165/298 (55%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + + S+ I PP +++ + +TGI+V+D+ P G Sbjct: 95 GRILNVVGRPVDEMGPI-EATASLPIHRPAPPFVDQSTSIELLETGIKVVDLLIPFPKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKKSV 218 ++G+F G+G+GK+ +L + +S+ VGER RE + ++ D L K+ Sbjct: 154 KMGLFGGAGVGKTVILMELINNIAKHHGGLSVFAGVGERTREGNDLYNEFKEADILGKAC 213 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 214 LVYGQMNEPPGARSRVALTGLTCAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRMP 273 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ ++L L ERI + +KG+IT+V +V V D+ DP + S LDG +V Sbjct: 274 SAVGYQPTLGTDLGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDGTLV 331 Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR+ D + AD + ++ ++++ +DI I G Sbjct: 332 LSRQIAELGIYPAVDPLDSTSRILDPQVLGADHYGTAREVQQILQKYKDLQDIIAILG 389 >gi|315453870|ref|YP_004074140.1| ATP synthase F1 sector subunit beta [Helicobacter felis ATCC 49179] gi|315132922|emb|CBY83550.1| ATP synthase F1 sector beta subunit [Helicobacter felis ATCC 49179] Length = 474 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K + I P + + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVVGEVIDNQEPL-KAPTTWPIHRAAPSFEQQSTKTEMFETGIKVVDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKEGGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG ++L+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDILMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ +L ERI + + G+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKNGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR+ D DE ++ + + ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDPQVIGDEHYRVATGIQQILQKYKDLQDIIAILG 382 >gi|312875902|ref|ZP_07735892.1| ATP synthase F1, beta subunit [Caldicellulosiruptor lactoaceticus 6A] gi|311797383|gb|EFR13722.1| ATP synthase F1, beta subunit [Caldicellulosiruptor lactoaceticus 6A] Length = 467 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 105/310 (33%), Positives = 166/310 (53%), Gaps = 9/310 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N LG+PID + D I P + + F+TGI+ Sbjct: 76 GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FI 206 VID+ P G +IG+F G+G+GK+ L+ R+ + I + VGER RE + ++ Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E ++K+V+V +E P R LT +T+AEYF +G VLL +D+I RF + Sbjct: 195 EMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQEVLLFIDNIFRFIQA 254 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ ++ R++ Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 373 ELQDIIAILG 382 >gi|1168575|sp|P43451|ATPB_ENTHR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|153573|gb|AAA26859.1| H+ ATPase [Enterococcus faecalis] Length = 468 Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 160/299 (53%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID S + EI K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLGSSFPEDAERSEIHKKAPSFDELSTSTEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATAFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S LA + + K+ + + H++ R+ E +DI I G Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEEHYKVATEVQHVLQRYRELQDIIAILG 385 >gi|315923929|ref|ZP_07920157.1| ATP synthase F1 sector beta subunit [Pseudoramibacter alactolyticus ATCC 23263] gi|315622769|gb|EFV02722.1| ATP synthase F1 sector beta subunit [Pseudoramibacter alactolyticus ATCC 23263] Length = 469 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 161/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G P+DG D L + EI + P ++ + +TGI+VID+ P G Sbjct: 85 LGRLFNVTGGPLDGGDPLTEAP-RWEIHREPPKFEDQSPAVEMLETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ R+ + I + VGER RE + + E L+K+ Sbjct: 144 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLYTEMRESGVLEKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R + P T +T+AEYF K NVLL +D+I RF + E++ G + Sbjct: 204 ALVFGQMNEPPGSRMLVPETGLTMAEYFRDEKHQNVLLFIDNIFRFTQAGSEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLANEMGQLQERI--TSTRNGSITSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E + + ++ +++E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYQTARRVQAILQKYQELQDIIAILG 380 >gi|222529413|ref|YP_002573295.1| F0F1 ATP synthase subunit beta [Caldicellulosiruptor bescii DSM 6725] gi|254808126|sp|B9MS68|ATPB_ANATD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|222456260|gb|ACM60522.1| ATP synthase F1, beta subunit [Caldicellulosiruptor bescii DSM 6725] Length = 467 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 105/310 (33%), Positives = 165/310 (53%), Gaps = 9/310 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N LG+PID + D I P + + F+TGI+ Sbjct: 76 GPIKVPVGRGTLGRIFNVLGEPIDNKGEVVASDY-WPIHRSAPSFEEQVPAVEIFETGIK 134 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIE 207 VID+ P G +IG+F G+G+GK+ L+ R+ + I + VGER RE + Sbjct: 135 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELIRNIATEHGGFSIFTGVGERTREGNDLWL 194 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 D ++K+V+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 195 DMNESGVIEKTVLVFGQMNEPPGARMRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFIQA 254 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP Sbjct: 255 GSEVSALLGRIPSAVGYQPTLANEVGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 312 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ ++ R++ Sbjct: 313 ATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYYVARTVQQILQRYK 372 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 373 ELQDIIAILG 382 >gi|282934187|ref|ZP_06339465.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1] gi|281301801|gb|EFA94067.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1] Length = 480 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 155/294 (52%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PID I + P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D +E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDI 378 >gi|269468571|gb|EEZ80220.1| F0F1-type ATP synthase, beta subunit [uncultured SUP05 cluster bacterium] Length = 459 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 102/298 (34%), Positives = 160/298 (53%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID + + EI PP + +TGI+VID+ P G Sbjct: 83 LGRIMNVLGEPIDNAGDIDP-EAEWEIHRSAPPYDELAPAAELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF +G +VLL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ SE+ L ERI + +KG+IT++ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLASEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR D +E V+ + ++ R++E +DI I G Sbjct: 320 LSRQVAELGIYPAVDPLDSTSRQLDPLIVGEEHYNVARGVQGVLQRYKELKDIIAILG 377 >gi|38906115|gb|AAR27810.1| ATP synthase beta chain [Lactobacillus amylolyticus DSM 11664] Length = 371 Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG+PID K D E + K P + + +TGI+VID+ P Sbjct: 28 LGRVFNVLGQPIDNGPEFPK-DHPREGIHKEAPKYDELTTSREILETGIKVIDLLEPYVR 86 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+T++ + + IS+ GER RE + + E L K Sbjct: 87 GGKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGAGERTREGNDLYFEMKASGVLSK 146 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 147 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 206 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 207 MPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDAT 264 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D E ++ + + H++ R+ E +D+ Sbjct: 265 TNLERSLVEQGIYPAVDPLESSSSALDPEVVGKEHYEVATRVQHVLQRYHELQDV 319 >gi|253702620|ref|YP_003023809.1| F0F1 ATP synthase subunit beta [Geobacter sp. M21] gi|259585445|sp|C6E9F1|ATPB_GEOSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|251777470|gb|ACT20051.1| ATP synthase F1, beta subunit [Geobacter sp. M21] Length = 470 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 167/301 (55%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D +G + I + P +N+ + F TGI+V+D+ P G Sbjct: 92 LGRILNVIGEPVDEMGPIGN-EKEYGIHREAPAFVNQSTKVEAFTTGIKVVDLLAPYARG 150 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215 +IG+F G+G+GK+ L+ ++ + F + + VGER RE + ++E L Sbjct: 151 GKIGLFGGAGVGKTVLIMELINNIAKQHGGFS--VFAGVGERTREGNDLWMEMKESGVLD 208 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L+A++IAEYF +G +VLL +D+I RF + E++ G Sbjct: 209 KAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLG 268 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + KG+IT+V ++ V D+ DP + + LD Sbjct: 269 RIPSAVGYQPTLATEMGELQERI--TSTNKGSITSVQAIYVPADDLTDPAPATAFAHLDA 326 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+R +AE G YP VDPL S SR+ D DE ++ + +++ ++++ +DI I Sbjct: 327 TTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGDEHYAIARQVQYVLQKYKDLQDIIAIL 386 Query: 394 G 394 G Sbjct: 387 G 387 >gi|304316372|ref|YP_003851517.1| ATP synthase F1 subunit beta [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777874|gb|ADL68433.1| ATP synthase F1, beta subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 461 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 111/327 (33%), Positives = 173/327 (52%), Gaps = 16/327 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LGKP+DG + K D + I P + V + +TGI+VID+ TP G Sbjct: 84 LGRMFNVLGKPVDGLGEV-KADKYVSIHRNAPSFEEQSPVTEVLETGIKVIDLLTPYAKG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ R+ + I + VGER RE + + + K+ Sbjct: 143 GKIGLFGGAGVGKTVLIEELIRNIATEHGGYSIFTGVGERTREGNDLWHEMKESGVIDKT 202 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 203 AFVFGQMNEPPGARMRVGLTGLTMAEYFRDEKHQDVLLFIDNIFRFIQAGSEVSALLGRM 262 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +EL L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 PSAVGYQPTLATELGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFTHLDATT 320 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGY 395 VL+RS+ E G YP VDPL S SR+ + + +E V+ + ++ +++E +DI I Sbjct: 321 VLSRSIVEMGIYPAVDPLDSTSRILEPSIVGEEHYNVARRVQEILQKYKELQDIIAI--- 377 Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQ 419 G+D + D+ V++ I FL Q Sbjct: 378 -LGMDELSDEDKLTVYRARKIQRFLSQ 403 >gi|238855947|ref|ZP_04646233.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 269-3] gi|260664664|ref|ZP_05865516.1| ATP synthase F1, beta subunit [Lactobacillus jensenii SJ-7A-US] gi|282934354|ref|ZP_06339621.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1] gi|313471885|ref|ZP_07812377.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 1153] gi|238831420|gb|EEQ23771.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 269-3] gi|239529199|gb|EEQ68200.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 1153] gi|260561729|gb|EEX27701.1| ATP synthase F1, beta subunit [Lactobacillus jensenii SJ-7A-US] gi|281301564|gb|EFA93841.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 208-1] Length = 480 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 155/294 (52%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PID I + P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D +E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDI 378 >gi|256850901|ref|ZP_05556290.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 27-2-CHN] gi|260661115|ref|ZP_05862029.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 115-3-CHN] gi|256615963|gb|EEU21151.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 27-2-CHN] gi|260548052|gb|EEX24028.1| ATP synthase F1, beta subunit [Lactobacillus jensenii 115-3-CHN] Length = 480 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 155/294 (52%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PID I + P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGDPIDNGPKFPADHRRDSIHKEAPKYSELTTSREILETGIKVIDLLEPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+T++ + + IS+ VGER RE + + E L K+ Sbjct: 147 GKVGLFGGAGVGKTTIIQELIHNIAQEHGGISVFTGVGERTREGNDLYFEMKASGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPL S S D +E ++ + + H++ R+ E +DI Sbjct: 325 NLERSLVEQGIYPAVDPLESTSSALDPEVVGEEHYEVATRVQHVLQRYHELQDI 378 >gi|28378938|ref|NP_785830.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum WCFS1] gi|254557143|ref|YP_003063560.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum JDM1] gi|300769661|ref|ZP_07079544.1| ATP synthase F1 sector beta subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308181146|ref|YP_003925274.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum subsp. plantarum ST-III] gi|81840957|sp|Q88UU3|ATPB_LACPL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|28271775|emb|CAD64681.1| H(+)-transporting two-sector ATPase, beta subunit [Lactobacillus plantarum WCFS1] gi|254046070|gb|ACT62863.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum JDM1] gi|300492704|gb|EFK27889.1| ATP synthase F1 sector beta subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|308046637|gb|ADN99180.1| F0F1 ATP synthase subunit beta [Lactobacillus plantarum subsp. plantarum ST-III] Length = 467 Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 101/294 (34%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ IDG G I P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGETIDGGPEFGPDAERNPIHRDAPKYDELTTSTEVLETGIKVIDLLAPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E LK + Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKASGVLKNT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL E+G YP VDPLAS S D + +E ++ + + ++ R+ E +DI Sbjct: 325 NLERSLTEQGIYPAVDPLASSSIALDPSIVGEEHYQVATEVQRVLQRYRELQDI 378 >gi|319956203|ref|YP_004167466.1| ATP synthase f1 subcomplex beta subunit [Nitratifractor salsuginis DSM 16511] gi|319418607|gb|ADV45717.1| ATP synthase F1 subcomplex beta subunit [Nitratifractor salsuginis DSM 16511] Length = 468 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 105/301 (34%), Positives = 164/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ + +G ID G+ K S+ + PPA + Q + F+TGI+V+D+ P Sbjct: 87 LGRIFDVVGNVIDDGEPVEAKTKWSIH---RTPPAFDVQSTKAEIFETGIKVVDLLAPYA 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ ++ + + + VGER RE + + N L Sbjct: 144 KGGKVGLFGGAGVGKTVIIMELINNVAMKHSGYSVFAGVGERTREGNDLYNEMKESNVLD 203 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K + +E P R LT +T+AEYF + G +VL+ +D+I RFA S E++ G Sbjct: 204 KVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFAQSGAEMSALLG 263 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ SE+ +L ERI + KG+IT+V +V V D+ DP SV + LD Sbjct: 264 RIPSAVGYQPTLASEMGKLQERI--TSTTKGSITSVQAVYVPADDLTDPAPASVFAHLDA 321 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VLNRS+AE+G YP VDPL S SR+ D DE V+ + ++ ++++ +DI I Sbjct: 322 TTVLNRSIAEKGIYPAVDPLDSTSRMLDPVIIGDEHYQVARGVQAILQKYKDLQDIIAIL 381 Query: 394 G 394 G Sbjct: 382 G 382 >gi|188527915|ref|YP_001910602.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Shi470] gi|188144155|gb|ACD48572.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Shi470] gi|308063917|gb|ADO05804.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Sat464] Length = 469 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGSEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|218781464|ref|YP_002432782.1| F0F1 ATP synthase subunit beta [Desulfatibacillum alkenivorans AK-01] gi|254808144|sp|B8FGT4|ATPB_DESAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|218762848|gb|ACL05314.1| ATP synthase F1, beta subunit [Desulfatibacillum alkenivorans AK-01] Length = 472 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 104/305 (34%), Positives = 164/305 (53%), Gaps = 17/305 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIM---SKVPPAMNRQRVE-KGFKTGIRVIDIF 155 GRV+N +G+P+DG G +S E M ++ P Q + +TG++VID+ Sbjct: 90 AVLGRVLNVVGRPVDG-----LGPVSQEKMLPIHRLAPKFTEQDTTVRVLETGVKVIDLL 144 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-G 211 P G ++G+F G+G+GK+ ++ + IS+ VGER RE + + G Sbjct: 145 VPFPRGGKMGMFGGAGVGKTVIMMEMVHNIAMQHGGISVFAGVGERTREGNDLYHEMKEG 204 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 L K+ +V E P R L+A+T AEYF +G +VL+ +D+I RF + E++ Sbjct: 205 GVLPKASLVYGQMTEPPGARARVALSALTSAEYFRDQEGQDVLIFIDNIFRFTQAGSEVS 264 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +L L ERI + +KG+ITAV V V D+ DP + + Sbjct: 265 ALLGRMPSAVGYQPTLAVDLGELQERI--TSTDKGSITAVQCVYVPADDLTDPAPATTFA 322 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LDG +VL+R + E G YP VDPL S SR+ D + DE V+ ++ ++ +++E +DI Sbjct: 323 HLDGTVVLSRQIVELGIYPAVDPLDSSSRILDPGYLGDEHYGVARTVQQMLQKYKELQDI 382 Query: 390 RLIGG 394 I G Sbjct: 383 IAILG 387 >gi|319936635|ref|ZP_08011048.1| ATP synthase subunit beta [Coprobacillus sp. 29_1] gi|319808192|gb|EFW04757.1| ATP synthase subunit beta [Coprobacillus sp. 29_1] Length = 468 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG PIDG + L ++M I P ++ + +TGI+VID+ P G Sbjct: 87 GRMFNVLGNPIDGKEPLDSSVMAMPIHRSAPTYAQQRTETEILETGIKVIDLICPYIKGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ + +S+ VGER RE + + E L K+ Sbjct: 147 KIGLFGGAGVGKTVLIQELINNIATQHGGLSVFAGVGERSREGNDLYYEMKESGVLNKTT 206 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G +P Sbjct: 207 LVFGQMNEPPGSRLRVALTGLTMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRVP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +E+ +L ERI + +KG+IT+V +V V D+ DP + + LD +V Sbjct: 267 SQAGYQPTLATEMGQLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDAKVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+A G YP VDPL S SR D ++ + ++ +F+E +DI I G Sbjct: 325 LDRSIAALGIYPAVDPLNSSSRALDPLVVGQVHYEVAHGVQQILQKFQELQDIIAILG 382 >gi|317014518|gb|ADU81954.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Gambia94/24] Length = 469 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHGKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|217034727|ref|ZP_03440128.1| hypothetical protein HP9810_3g12 [Helicobacter pylori 98-10] gi|216942810|gb|EEC22309.1| hypothetical protein HP9810_3g12 [Helicobacter pylori 98-10] Length = 466 Score = 156 bits (394), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 87 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 382 >gi|119368476|sp|Q1CSD5|ATPB_HELPH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 466 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 87 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 382 >gi|317178566|dbj|BAJ56354.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F30] Length = 469 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|261839863|gb|ACX99628.1| F0F1 ATP synthase subunit beta [Helicobacter pylori 52] gi|315587020|gb|ADU41401.1| ATP synthase F1 sector beta subunit [Helicobacter pylori 35A] gi|317012909|gb|ADU83517.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Lithuania75] gi|317180864|dbj|BAJ58650.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F32] gi|317182385|dbj|BAJ60169.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F57] gi|332673930|gb|AEE70747.1| ATP synthase F1 sector beta subunit [Helicobacter pylori 83] Length = 469 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|254779683|ref|YP_003057789.1| F0F1 ATP synthase subunit beta [Helicobacter pylori B38] gi|254001595|emb|CAX29662.1| ATP synthase F1, subunit beta (ATPase subunit beta) (ATP synthase F1 sector subunit beta) [Helicobacter pylori B38] Length = 469 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|208435029|ref|YP_002266695.1| ATP synthase F1, subunit beta [Helicobacter pylori G27] gi|226740208|sp|B5Z8D0|ATPB_HELPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|2197129|gb|AAB61298.1| F1F0-ATPase beta subunit [Helicobacter pylori] gi|208432958|gb|ACI27829.1| ATP synthase F1, subunit beta [Helicobacter pylori G27] Length = 469 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|92115399|ref|YP_575327.1| F0F1 ATP synthase subunit beta [Chromohalobacter salexigens DSM 3043] gi|118573521|sp|Q1QSD0|ATPB_CHRSD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|91798489|gb|ABE60628.1| ATP synthase F1 subcomplex beta subunit [Chromohalobacter salexigens DSM 3043] Length = 458 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 109/332 (32%), Positives = 168/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G E + G D+V + GR++N LG+PID +G+ D M Sbjct: 48 VVRAIAMGTTEGLKRGLDVVNSGSAISVPVGKATLGRIMNVLGEPIDEAGEIGE-DERMP 106 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I K P + + +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 107 IHRKAPSYAEQAASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAT 166 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + N L K +V +E P R LT +TIAE Sbjct: 167 EHSGYSVFAGVGERTREGNDFYHEMQESNVLDKVSLVYGQMNEPPGNRLRVALTGLTIAE 226 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 227 KFRDDGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 284 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + S LD +VL RS+AE G YP +DPL S SR D Sbjct: 285 TGSITSVQAVYVPADDLTDPSPATTFSHLDATVVLARSIAELGIYPAIDPLDSTSRQLDP 344 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E + ++ R++E +DI I G Sbjct: 345 LTVGEEHYNTARGVQGVLQRYKELKDIIAILG 376 >gi|15612125|ref|NP_223777.1| F0F1 ATP synthase subunit beta [Helicobacter pylori J99] gi|9910638|sp|Q9ZK81|ATPB_HELPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|4155651|gb|AAD06639.1| ATP synthase F1, subunit beta [Helicobacter pylori J99] Length = 469 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|217032681|ref|ZP_03438167.1| hypothetical protein HPB128_202g15 [Helicobacter pylori B128] gi|298735865|ref|YP_003728390.1| F-type H+-transporting ATPase beta chain [Helicobacter pylori B8] gi|216945611|gb|EEC24262.1| hypothetical protein HPB128_202g15 [Helicobacter pylori B128] gi|298355054|emb|CBI65926.1| F-type H+-transporting ATPase beta chain [Helicobacter pylori B8] Length = 466 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 87 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 382 >gi|69247775|ref|ZP_00604480.1| ATP synthase F1, beta subunit [Enterococcus faecium DO] gi|227552045|ref|ZP_03982094.1| ATP synthase subunit beta [Enterococcus faecium TX1330] gi|257879714|ref|ZP_05659367.1| ATP synthase F1 [Enterococcus faecium 1,230,933] gi|257882707|ref|ZP_05662360.1| ATP synthase F1 [Enterococcus faecium 1,231,502] gi|257884021|ref|ZP_05663674.1| ATP synthase F1 [Enterococcus faecium 1,231,501] gi|257886793|ref|ZP_05666446.1| ATP synthase F1 [Enterococcus faecium 1,141,733] gi|257890378|ref|ZP_05670031.1| ATP synthase F1 [Enterococcus faecium 1,231,410] gi|257892986|ref|ZP_05672639.1| ATP synthase F1 [Enterococcus faecium 1,231,408] gi|257895361|ref|ZP_05675014.1| ATP synthase F1 [Enterococcus faecium Com12] gi|257897973|ref|ZP_05677626.1| ATP synthase F1 [Enterococcus faecium Com15] gi|258616675|ref|ZP_05714445.1| F0F1 ATP synthase subunit beta [Enterococcus faecium DO] gi|260559627|ref|ZP_05831807.1| ATP synthase F1 [Enterococcus faecium C68] gi|261208692|ref|ZP_05923129.1| ATP synthase F1 [Enterococcus faecium TC 6] gi|289566051|ref|ZP_06446488.1| ATP synthase F1, beta subunit [Enterococcus faecium D344SRF] gi|293378232|ref|ZP_06624401.1| ATP synthase F1, beta subunit [Enterococcus faecium PC4.1] gi|293556416|ref|ZP_06674997.1| ATP synthase F1, beta subunit [Enterococcus faecium E1039] gi|293560028|ref|ZP_06676532.1| ATP synthase F1, beta subunit [Enterococcus faecium E1162] gi|293568724|ref|ZP_06680039.1| ATP synthase F1, beta subunit [Enterococcus faecium E1071] gi|293572425|ref|ZP_06683405.1| ATP synthase F1, beta subunit [Enterococcus faecium E980] gi|294616249|ref|ZP_06696042.1| ATP synthase F1, beta subunit [Enterococcus faecium E1636] gi|294617581|ref|ZP_06697211.1| ATP synthase F1, beta subunit [Enterococcus faecium E1679] gi|294623204|ref|ZP_06702082.1| ATP synthase F1, beta subunit [Enterococcus faecium U0317] gi|314939612|ref|ZP_07846839.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a04] gi|314941238|ref|ZP_07848134.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133C] gi|314949829|ref|ZP_07853139.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0082] gi|314953379|ref|ZP_07856304.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133A] gi|314993456|ref|ZP_07858821.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133B] gi|314997321|ref|ZP_07862286.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a01] gi|68194704|gb|EAN09186.1| ATP synthase F1, beta subunit [Enterococcus faecium DO] gi|227178798|gb|EEI59770.1| ATP synthase subunit beta [Enterococcus faecium TX1330] gi|257813942|gb|EEV42700.1| ATP synthase F1 [Enterococcus faecium 1,230,933] gi|257818365|gb|EEV45693.1| ATP synthase F1 [Enterococcus faecium 1,231,502] gi|257819859|gb|EEV47007.1| ATP synthase F1 [Enterococcus faecium 1,231,501] gi|257822847|gb|EEV49779.1| ATP synthase F1 [Enterococcus faecium 1,141,733] gi|257826738|gb|EEV53364.1| ATP synthase F1 [Enterococcus faecium 1,231,410] gi|257829365|gb|EEV55972.1| ATP synthase F1 [Enterococcus faecium 1,231,408] gi|257831926|gb|EEV58347.1| ATP synthase F1 [Enterococcus faecium Com12] gi|257835885|gb|EEV60959.1| ATP synthase F1 [Enterococcus faecium Com15] gi|260074295|gb|EEW62617.1| ATP synthase F1 [Enterococcus faecium C68] gi|260077194|gb|EEW64914.1| ATP synthase F1 [Enterococcus faecium TC 6] gi|289162158|gb|EFD10021.1| ATP synthase F1, beta subunit [Enterococcus faecium D344SRF] gi|291588684|gb|EFF20517.1| ATP synthase F1, beta subunit [Enterococcus faecium E1071] gi|291590763|gb|EFF22479.1| ATP synthase F1, beta subunit [Enterococcus faecium E1636] gi|291596187|gb|EFF27450.1| ATP synthase F1, beta subunit [Enterococcus faecium E1679] gi|291597399|gb|EFF28572.1| ATP synthase F1, beta subunit [Enterococcus faecium U0317] gi|291601483|gb|EFF31754.1| ATP synthase F1, beta subunit [Enterococcus faecium E1039] gi|291605895|gb|EFF35325.1| ATP synthase F1, beta subunit [Enterococcus faecium E1162] gi|291607487|gb|EFF36829.1| ATP synthase F1, beta subunit [Enterococcus faecium E980] gi|292643096|gb|EFF61237.1| ATP synthase F1, beta subunit [Enterococcus faecium PC4.1] gi|313588612|gb|EFR67457.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a01] gi|313592121|gb|EFR70966.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133B] gi|313594572|gb|EFR73417.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133A] gi|313599962|gb|EFR78805.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133C] gi|313641152|gb|EFS05732.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0133a04] gi|313643902|gb|EFS08482.1| ATP synthase F1, beta subunit [Enterococcus faecium TX0082] Length = 468 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 160/299 (53%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + EI K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLETPFPEDAERSEIHKKAPAFDELSTSTEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATAFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S LA + + K+ + + H++ R+ E +DI I G Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEEHYKVATEVQHVLQRYRELQDIIAILG 385 >gi|317177882|dbj|BAJ55671.1| F0F1 ATP synthase subunit beta [Helicobacter pylori F16] Length = 469 Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|308062408|gb|ADO04296.1| F0F1 ATP synthase subunit beta [Helicobacter pylori Cuz20] Length = 469 Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|261883793|ref|ZP_06007832.1| flagellum-specific ATP synthase [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 201 Score = 155 bits (393), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 86/195 (44%), Positives = 121/195 (62%), Gaps = 4/195 (2%) Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 +G PID L KG + + P + R + + + G++ ID + GQR+G+FA Sbjct: 1 MGMPID-LSPLPKGLVPVRTEQDPPNPLTRPTIRERIEVGVKAIDGMLTVGKGQRVGIFA 59 Query: 169 GSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 GSG+GKSTLL M AR+ D +I+L+GERGREVREFIE+ LG+ K++++V ATSD+ Sbjct: 60 GSGVGKSTLLGMIARNTTADLNVIALIGERGREVREFIENDLGEEGQKRTIIVAATSDQP 119 Query: 228 PILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 ++R TA IAEYF +G NV+L++DS+TR A + RE+ E P RGY SVF Sbjct: 120 ALMRIKGAFTATAIAEYFRDRGLNVMLMMDSVTRVAMAQREVWLAVWEPPATRGYTPSVF 179 Query: 288 SELPRLLERIGPSEK 302 S LP L P+E+ Sbjct: 180 SILPNCLR--DPNER 192 >gi|317009744|gb|ADU80324.1| F0F1 ATP synthase subunit beta [Helicobacter pylori India7] Length = 469 Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|166033116|ref|ZP_02235945.1| hypothetical protein DORFOR_02838 [Dorea formicigenerans ATCC 27755] gi|166027473|gb|EDR46230.1| hypothetical protein DORFOR_02838 [Dorea formicigenerans ATCC 27755] Length = 470 Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 108/325 (33%), Positives = 169/325 (52%), Gaps = 11/325 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + K EI + P + + +TGI+VID+ P G Sbjct: 89 LGRLFNVLGQTIDDGKEIEKDAERWEIHRQAPTFEEQSPAVEILETGIKVIDLLAPYAKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ R+ + I + VGER RE + + L+K+ Sbjct: 149 GKIGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGVGERSREGNDLWTEMKASGVLEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF K NVLL +D+I RF + E++ G + Sbjct: 209 ALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G++T+V +V V D+ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGELQERIAST--KNGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R + E+G YP VDPL S SR+ + +E K+ + +T ++ +++E +DI I G Sbjct: 327 VLSRKVVEQGIYPAVDPLESNSRILEADIVGEEHYKVANQVTEILQKYKELQDIIAILGM 386 Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ 419 D DKA V + I FL Q Sbjct: 387 EELSD--EDKATVMRARKIQKFLSQ 409 >gi|108563495|ref|YP_627811.1| F0F1 ATP synthase subunit beta [Helicobacter pylori HPAG1] gi|107837268|gb|ABF85137.1| ATP synthase F1, subunit beta [Helicobacter pylori HPAG1] gi|307637801|gb|ADN80251.1| ATP synthase beta chain [Helicobacter pylori 908] gi|325996399|gb|ADZ51804.1| ATP synthase beta chain [Helicobacter pylori 2018] gi|325997987|gb|ADZ50195.1| ATP synthase beta subunit [Helicobacter pylori 2017] Length = 469 Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|296273869|ref|YP_003656500.1| ATP synthase F1 subunit beta [Arcobacter nitrofigilis DSM 7299] gi|296098043|gb|ADG93993.1| ATP synthase F1, beta subunit [Arcobacter nitrofigilis DSM 7299] Length = 464 Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 162/316 (51%), Gaps = 8/316 (2%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 + + G ++ GR+ N +G P+D +++ + I P + + Sbjct: 69 ECIAQGGPIQVPVGEAVLGRIFNVIGDPVDEGEAIPEETPRWSIHRAAPTFEEQSTKAEM 128 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE 201 F+TGI+V+D+ P G ++G+F G+G+GK+ ++ + F + + VGER RE Sbjct: 129 FETGIKVVDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTRE 188 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 + + N L K + E P R LT +T+AEYF KG +VL+ +D+I Sbjct: 189 GNDLYHEMKDSNVLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVLMFVDNI 248 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RFA S E++ G +P A GY ++ SE+ +L ERI + KG+IT+V +V V D+ Sbjct: 249 FRFAQSGSEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTAKGSITSVQAVYVPADD 306 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 DP SV + LD VLNR +AE+G YP VDPL S SR L+ + + Sbjct: 307 LTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDSSSRILSADILGQEHYNTARGVQS 366 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 367 VLQKYKDLQDIIAILG 382 >gi|1703680|sp|P50002|ATPB_ACEWO RecName: Full=ATP synthase subunit beta, sodium ion specific; AltName: Full=Na(+)-translocating ATPase subunit beta gi|501149|gb|AAA79908.1| F1FO ATPase beta subunit [Acetobacterium woodii DSM 1030] gi|1096934|prf||2113197B Na ATPase:ISOTYPE=beta Length = 466 Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 10/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PIDG D+ M + + PP+ Q+ + + F+TGI+V+D+ P G Sbjct: 88 GRMFNVLGEPIDGK-PFDTKDVVMHPIHRHPPSFEEQQTQPEMFETGIKVVDLICPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + + K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIATQHGGLSVFAGVGERTREGNDLYYEMMESGVINKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R L +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 ALCFGQMNEPPGARMRIALAGLTMAEYFRDDEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + KG+IT+V +V D+ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTSKGSITSVQAVYDPADDLTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++ E+G YP VDPL S SR+ D K + + + ++ R++E +DI I G Sbjct: 325 VLSRAITEKGIYPAVDPLDSTSRILDPKIVGQEHYETAREVQEILQRYKELQDIIAILG 383 >gi|258646348|ref|ZP_05733817.1| ATP synthase F1, beta subunit [Dialister invisus DSM 15470] gi|260403746|gb|EEW97293.1| ATP synthase F1, beta subunit [Dialister invisus DSM 15470] Length = 477 Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 163/311 (52%), Gaps = 9/311 (2%) Query: 91 GRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 GR +P C GR+ N LG+ +D DD+ I P ++ + F+TGI Sbjct: 84 GRAIAAPVGDGCLGRIFNVLGQTVDNDDTKVPASDYWPIHRPAPAFKDQSPATEIFETGI 143 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI 206 +V+D+ P G +IG+F G+G+GK+ L+ + + S+ VGER RE + Sbjct: 144 KVVDLIAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHSGCSVFCGVGERTREGNDLW 203 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264 + L K +V +E P R LT +T+AEYF K G +VLL +D+I RF Sbjct: 204 GEMKDSGVLSKVALVYGQMNEPPGARMRVALTGLTMAEYFRDKQGQDVLLFVDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + + G+IT++ +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATDIGELQERI--TSTKDGSITSIQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 V + LD VL+RS+AE G YP VDPL S SR+ D +E ++ + ++ R+ Sbjct: 322 PAGVFTHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNVLGEEHYEVARGVQAILQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|312869606|ref|ZP_07729757.1| ATP synthase F1, beta subunit [Lactobacillus oris PB013-T2-3] gi|311094892|gb|EFQ53185.1| ATP synthase F1, beta subunit [Lactobacillus oris PB013-T2-3] Length = 475 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 110/328 (33%), Positives = 169/328 (51%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+P+D G M I P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGEPVDNGPEFGPDAKRMPIHRDAPKYDELNNNTEILETGIKVIDLLAPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + E L+K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF KG +VLL +D+I RF + E++ G + Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 L R L + G YP VDPL S S L + + ++ + + H++ R+ E +DI I Sbjct: 325 NLERRLTQIGIYPAVDPLESTSTALTPEIVGKEHYEVATQVQHVLQRYHELQDIISI--- 381 Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420 G+D + D+ V + I +FL QS Sbjct: 382 -LGMDELSDEEKTIVARARRIQNFLSQS 408 >gi|259503682|ref|ZP_05746584.1| ATP synthase F1 sector subunit beta [Lactobacillus antri DSM 16041] gi|259168314|gb|EEW52809.1| ATP synthase F1 sector subunit beta [Lactobacillus antri DSM 16041] Length = 475 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 110/328 (33%), Positives = 169/328 (51%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+P+D G M I P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGEPVDNGPEFGPDAKRMPIHRDAPKYDELNNNTEILETGIKVIDLLAPYVRG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + E L+K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLEKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF KG +VLL +D+I RF + E++ G + Sbjct: 207 AMVYGQMNEPPGARMRVALTGLTIAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 L R L + G YP VDPL S S L + + ++ + + H++ R+ E +DI I Sbjct: 325 NLERRLTQIGIYPAVDPLESTSTALTPEIVGKEHYEVATQVQHVLQRYHELQDIISI--- 381 Query: 396 RPGVDLILDKA---VHQVPIIYDFLKQS 420 G+D + D+ V + I +FL QS Sbjct: 382 -LGMDELSDEEKTIVARARRIQNFLSQS 408 >gi|15645746|ref|NP_207923.1| F0F1 ATP synthase subunit beta [Helicobacter pylori 26695] gi|2493023|sp|P55988|ATPB_HELPY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|2314283|gb|AAD08174.1| ATP synthase F1, subunit beta (atpD) [Helicobacter pylori 26695] Length = 469 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEVATGIQQVLQKYKDLQDIIAILG 385 >gi|210135291|ref|YP_002301730.1| F0F1 ATP synthase subunit beta [Helicobacter pylori P12] gi|226740207|sp|B6JMX2|ATPB_HELP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|210133259|gb|ACJ08250.1| ATP synthase F1 subunit beta [Helicobacter pylori P12] Length = 469 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPL-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEVATGIQQVLQKYKDLQDIIAILG 385 >gi|91201498|emb|CAJ74558.1| strongly similar to ATP synthase subunit beta [Candidatus Kuenenia stuttgartiensis] Length = 471 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 104/301 (34%), Positives = 163/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMN-RQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LGKPID +D K L + + PP+ R+ +TG++VID+ P Sbjct: 93 LGRIFNLLGKPIDTKEDFEAKNYLPIH---RAPPSFEERETTTTVLETGLKVIDLLAPFA 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ RS + + VGER RE + ++E + Sbjct: 150 RGGKIGLFGGAGVGKTVLIMELIRSIATEHGGYSAFAGVGERTREGNDLWLEMKESGVID 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+V+V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 210 KTVLVFGQMNEPPGARLRVALTGLTMAEYFRDVEGQDVLLFIDNIFRFVQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + LD Sbjct: 270 RMPSAVGYQPTLATEMGDLQERI--TTTKKGSITSLQAVYVPADDFTDPAPVTTFPHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 I L+R +AE G YP VDPL S SR+ D + + ++ + ++ RF+E +D I Sbjct: 328 TIALSRQIAELGIYPAVDPLRSTSRILDPRILGQEHYEVAREVQRILQRFKELQDFIAIL 387 Query: 394 G 394 G Sbjct: 388 G 388 >gi|58040595|ref|YP_192559.1| F0F1 ATP synthase subunit beta [Gluconobacter oxydans 621H] gi|81819018|sp|Q5FNZ3|ATPB2_GLUOX RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|58003009|gb|AAW61903.1| ATP synthase beta chain [Gluconobacter oxydans 621H] Length = 486 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/278 (35%), Positives = 151/278 (54%), Gaps = 13/278 (4%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRV 151 R+ GR+++ G P D +L D+ + PPAM + F+TG++V Sbjct: 91 LRVPVGEAVVGRMLDVTGIPRDNGPAL-PADVPRRAIHSDPPAMQTENASTDIFETGVKV 149 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFI 206 +D+ TPL HG + +F G+G+GK+ L +M A+ I + VGER RE E + Sbjct: 150 LDLLTPLAHGGKAAMFGGAGVGKTVLTMELIHAMAAKYQGLS--IFTGVGERSREGHEML 207 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 D G ++ +V+V +E P R PLTA+ IAEYF + NVLL++D+I RF Sbjct: 208 SDMNGSGVIRHAVLVYGQMNEPPGARWRVPLTALAIAEYFRDEQHKNVLLLMDNIYRFVQ 267 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E+++ G LP GY +++ +E+ + ERI + +TA+ +V V D+ DP Sbjct: 268 AGSELSSLLGRLPSRVGYQSTLATEVGAVEERI--TSVAGAAVTAIQTVYVPADDFTDPA 325 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 ++ + +D IVL+R LA +G YP VDPLAS S L D Sbjct: 326 VTAIATHMDSQIVLSRDLAAQGFYPAVDPLASSSVLLD 363 >gi|291561953|emb|CBL40761.1| ATP synthase F1 subcomplex beta subunit [butyrate-producing bacterium SS3/4] Length = 463 Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 167/312 (53%), Gaps = 11/312 (3%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D V G + GR+ N LG+PID ++ K + + I K P + + Sbjct: 72 DAVATGGPIMVPVGEQTLGRIFNVLGQPIDNKEAP-KTEKKLPIHCKAPSFEEQSTETEI 130 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE 201 +TGI+V+D+ P G +IG+F G+G+GK+ L+ R+ + + + VGER RE Sbjct: 131 LETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTRE 190 Query: 202 VREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDS 258 + + + D+ + K+ +V +E P R LT +T+AEYF +G +VLL +D+ Sbjct: 191 GNDLYYE-MSDSGVINKTTMVFGQMNEPPGSRMRVGLTGLTMAEYFRDEGGKDVLLFIDN 249 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF+ + E++ G +P A GY ++ +E+ L ERI + + G+IT+V +V V D Sbjct: 250 IFRFSQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPAD 307 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377 + DP + + LD VL+RS+ E G YP VDPL S SR+ D +E K+ + Sbjct: 308 DLTDPAPANTFTHLDATTVLSRSIVELGIYPAVDPLESTSRILDPRIVGEEHYKVARGVQ 367 Query: 378 HLIHRFEETRDI 389 ++ R++E +DI Sbjct: 368 EVLQRYKELQDI 379 >gi|328954125|ref|YP_004371459.1| ATP synthase subunit beta [Desulfobacca acetoxidans DSM 11109] gi|328454449|gb|AEB10278.1| ATP synthase subunit beta [Desulfobacca acetoxidans DSM 11109] Length = 470 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 161/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV+N +GKP+DG ++ + I P +++ K +TG++VID+ P G Sbjct: 90 LGRVLNVVGKPVDGLGTVEAKNY-YTIHRPAPAFVDQDTTVKVLETGVKVIDLLVPFPRG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + IS+ VGER RE + ++E L K Sbjct: 149 GKMGMFGGAGVGKTVIMMEMVHNIAMHHGGISVFAGVGERTREGNDLYLEMKHSGVLPKC 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 ++ E P R LT +T AEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 ALIYGQMTEPPGARARVALTGLTAAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ ++L L ERI + +KG+IT+V V V D+ DP + + LDG + Sbjct: 269 PSAVGYQPTLGTDLGELQERI--TSTKKGSITSVQCVYVPADDLTDPAPATTFAHLDGTV 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D +E VS +I +++E +DI I G Sbjct: 327 VLSRQIAELGIYPAVDPLDSTSRILDPMVLGEEHYRVSRQVQMILQKYKELQDIIAILG 385 >gi|258406332|ref|YP_003199074.1| ATP synthase F1, beta subunit [Desulfohalobium retbaense DSM 5692] gi|257798559|gb|ACV69496.1| ATP synthase F1, beta subunit [Desulfohalobium retbaense DSM 5692] Length = 468 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 168/303 (55%), Gaps = 17/303 (5%) Query: 102 CGRVINALGKPIDG----DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR++N +G+P+D DDS+ +M I + P +++ + +TGI+V+D+ P Sbjct: 91 LGRIMNVVGRPVDEAGPIDDSI-----TMPIHREAPELVDQNTAVELLETGIKVVDLLIP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYL-GDN 213 G ++G+F G+G+GK+ +L + + K + + VGER RE + E+ Sbjct: 146 FPKGGKMGLFGGAGVGKTVILMEMINNIAKEHGGKSVFAGVGERTREGNDLYEEMKEAGV 205 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 + + ++ +E P R LTA+T AEYF +G++VLL +D+I RF + E++ Sbjct: 206 INNAALIYGQMNEPPGARARVALTALTCAEYFRDEEGEDVLLFIDNIFRFTQAGMEVSAL 265 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ ++L L ERI + +KG+IT+V +V V D+ DP + S L Sbjct: 266 LGRMPSAVGYQPTLGTDLGELQERI--TSTQKGSITSVQAVYVPADDLTDPAPATTFSHL 323 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391 DG +VL+R +AE G YP VDPL S SR+ D + ++ + ++ ++++ +DI Sbjct: 324 DGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVLGTEHYQVARGVQQVLQKYKDLQDIIA 383 Query: 392 IGG 394 I G Sbjct: 384 ILG 386 >gi|197120311|ref|YP_002140738.1| F0F1 ATP synthase subunit beta [Geobacter bemidjiensis Bem] gi|322421875|ref|YP_004201098.1| ATP synthase F1 subunit beta [Geobacter sp. M18] gi|226740204|sp|B5EFI7|ATPB_GEOBB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|197089671|gb|ACH40942.1| ATP synthase F1, beta subunit [Geobacter bemidjiensis Bem] gi|320128262|gb|ADW15822.1| ATP synthase F1, beta subunit [Geobacter sp. M18] Length = 470 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 167/301 (55%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D +G + I + P +N+ + F TGI+V+D+ P G Sbjct: 92 LGRILNVIGEPVDEMGPIGN-EKEYGIHREAPLFVNQSTKVEAFTTGIKVVDLLAPYARG 150 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215 +IG+F G+G+GK+ L+ ++ + F + + VGER RE + ++E L Sbjct: 151 GKIGLFGGAGVGKTVLIMELINNIAKQHGGFS--VFAGVGERTREGNDLWMEMKESGVLD 208 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L+A++IAEYF +G +VLL +D+I RF + E++ G Sbjct: 209 KAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLG 268 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + KG+IT+V ++ V D+ DP + + LD Sbjct: 269 RIPSAVGYQPTLATEMGELQERI--TSTNKGSITSVQAIYVPADDLTDPAPATAFAHLDA 326 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+R +AE G YP VDPL S SR+ D DE ++ + +++ ++++ +DI I Sbjct: 327 TTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGDEHYAIARQVQYVLQKYKDLQDIIAIL 386 Query: 394 G 394 G Sbjct: 387 G 387 >gi|157737829|ref|YP_001490513.1| F0F1 ATP synthase subunit beta [Arcobacter butzleri RM4018] gi|315637619|ref|ZP_07892825.1| ATP synthase F1 sector beta subunit [Arcobacter butzleri JV22] gi|226739974|sp|A8EV70|ATPB_ARCB4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157699683|gb|ABV67843.1| ATP synthase F1 sector, beta subunit [Arcobacter butzleri RM4018] gi|315478073|gb|EFU68800.1| ATP synthase F1 sector beta subunit [Arcobacter butzleri JV22] Length = 464 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 158/310 (50%), Gaps = 8/310 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N +G P+D ++ I P + + F+TGI+ Sbjct: 75 GPIKVPVGEAVLGRIFNVIGDPVDEGSAIPADTERWSIHRSAPTFEEQSTKTEMFETGIK 134 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIE 207 V+D+ P G ++G+F G+G+GK+ ++ + F + + VGER RE + Sbjct: 135 VVDLLAPYSKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYH 194 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + N L K + E P R LT +T+AEYF KG +VL+ +D+I RFA S Sbjct: 195 EMKDSNVLDKVALCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVLMFIDNIFRFAQS 254 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ SE+ +L ERI + KG+IT+V +V V D+ DP Sbjct: 255 GSEMSALLGRIPSAVGYQPTLASEMGKLQERI--TSTSKGSITSVQAVYVPADDLTDPAP 312 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 SV + LD VLNR +AE+G YP VDPL S SR L+ + + ++ +++ Sbjct: 313 ASVFAHLDATTVLNRKIAEKGIYPAVDPLDSTSRILSADIIGQEHYNTARGVQSVLQKYK 372 Query: 385 ETRDIRLIGG 394 + +DI I G Sbjct: 373 DLQDIIAILG 382 >gi|77918557|ref|YP_356372.1| F0F1 ATP synthase subunit beta [Pelobacter carbinolicus DSM 2380] gi|118573499|sp|Q3A605|ATPB1_PELCD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|77544640|gb|ABA88202.1| ATP synthase F1 subcomplex beta subunit [Pelobacter carbinolicus DSM 2380] Length = 468 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 167/301 (55%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + + D + EI P +++ + F+TGI+V+D+ P G Sbjct: 90 LGRILNVIGEPVDEQGPV-ETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARG 148 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 +IG+F G+G+GK+ L+ ++ + F + + VGER RE + + N L Sbjct: 149 GKIGLFGGAGVGKTVLIMELIHNIAKKHGGFS--VFAGVGERTREGNDLWNEMKESNVLD 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L+A+T+AEYF + +VLL +D+I RF + E++ G Sbjct: 207 KTALVYGQMNEPPGARARVALSALTVAEYFRDQENQDVLLFVDNIFRFTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V ++ V D+ DP + + LD Sbjct: 267 RIPSAVGYQPTLSTEMGELQERI--TTTKNGSITSVQAIYVPADDLTDPAPATTFAHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+R +AE G YP VDPL S SR+ D +E V+ + +++ R+++ +DI I Sbjct: 325 TTVLSRQIAELGIYPAVDPLDSSSRILDPQVLGEEHYQVARDVQYVLQRYKDLQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|152990964|ref|YP_001356686.1| F0F1 ATP synthase subunit beta [Nitratiruptor sp. SB155-2] gi|166201722|sp|A6Q4C0|ATPB_NITSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|151422825|dbj|BAF70329.1| F0F1-type ATP synthase, beta subunit [Nitratiruptor sp. SB155-2] Length = 469 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G ID + L + I PP + E+ F+TGI+V+D+ P G Sbjct: 90 LGRIFNVIGDTIDEGEPL-QAKTYWSIHRSAPPFEEQSTKEEIFETGIKVVDLLAPYKKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ ++ + + + + VGER RE + + N L K Sbjct: 149 GKTGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYYEMKESNVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R LT +T+AEYF + G +VL+ +D+I R+A + E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRYAQAGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ RL ERI + +KG+IT++ +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLASEMGRLQERI--TSTKKGSITSIQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I G Sbjct: 327 VLNRRIAEKGIYPAVDPLDSTSRMLDPNIVGEEHYKVARGVQAVLQKYKDLQDIIAILG 385 >gi|138896935|ref|YP_001127388.1| F0F1 ATP synthase subunit beta [Geobacillus thermodenitrificans NG80-2] gi|196249752|ref|ZP_03148448.1| ATP synthase F1, beta subunit [Geobacillus sp. G11MC16] gi|166201707|sp|A4ITI9|ATPB_GEOTN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134268448|gb|ABO68643.1| ATP synthase beta subunit [Geobacillus thermodenitrificans NG80-2] gi|196210628|gb|EDY05391.1| ATP synthase F1, beta subunit [Geobacillus sp. G11MC16] Length = 473 Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 109/331 (32%), Positives = 173/331 (52%), Gaps = 17/331 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+PID D + + + + + P E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGEPIDLQDDI-PAEARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + KG+IT++ ++ V D++ DP + S LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTSKGSITSIQAIYVPADDYTDPAPATTFSHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R LAE G YP VDPLAS SR LA + + ++ + + R++E +DI I Sbjct: 327 ATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARRVQQTLQRYKELQDIIAI 386 Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ VH+ I FL Q+ Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413 >gi|148266273|ref|YP_001232979.1| F0F1 ATP synthase subunit beta [Geobacter uraniireducens Rf4] gi|189081335|sp|A5G9D8|ATPB_GEOUR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|146399773|gb|ABQ28406.1| ATP synthase F1 subcomplex beta subunit [Geobacter uraniireducens Rf4] Length = 470 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 164/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G P+D +G + I + P +++ + F TGI+V+D+ P G Sbjct: 92 LGRILNVIGDPVDEMGPVG-AEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYARG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + + VGER RE + ++E L+K+ Sbjct: 151 GKIGLFGGAGVGKTVLIMELINNIAMQHGGFSVFAGVGERTREGNDLWMEMKESGVLEKT 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L+A++IAEYF +G NVLL +D+I RF + E++ G + Sbjct: 211 ALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFIDNIFRFTQAGSEVSALLGRI 270 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + KG+IT+V ++ V D+ DP + + LD Sbjct: 271 PSAVGYQPTLATEMGELQERI--TSTNKGSITSVQAIYVPADDLTDPAPATAFAHLDATT 328 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D +E ++ + +++ ++++ +DI I G Sbjct: 329 VLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYAIARQVQYVLQKYKDLQDIIAILG 387 >gi|116494662|ref|YP_806396.1| F0F1 ATP synthase subunit beta [Lactobacillus casei ATCC 334] gi|191638161|ref|YP_001987327.1| F0F1 ATP synthase subunit beta [Lactobacillus casei BL23] gi|239631737|ref|ZP_04674768.1| ATP synthase subunit beta [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066221|ref|YP_003788244.1| F0F1-type ATP synthase subunit beta [Lactobacillus casei str. Zhang] gi|122263917|sp|Q03A18|ATPB_LACC3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740211|sp|B3WDL8|ATPB_LACCB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116104812|gb|ABJ69954.1| ATP synthase F1 subcomplex beta subunit [Lactobacillus casei ATCC 334] gi|190712463|emb|CAQ66469.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1 sector subunit beta) [Lactobacillus casei BL23] gi|239526202|gb|EEQ65203.1| ATP synthase subunit beta [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300438628|gb|ADK18394.1| F0F1-type ATP synthase, beta subunit [Lactobacillus casei str. Zhang] gi|327382192|gb|AEA53668.1| F1F0-ATPase subunit beta [Lactobacillus casei LC2W] Length = 488 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 155/294 (52%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PIDG ++ G I P + + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDPIDGGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E L+ + Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S DE K+ + + ++ R+ E +DI Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTPEIVGDEHYKVATEVQQVLQRYRELQDI 380 >gi|222823236|ref|YP_002574809.1| ATP synthase F1 sector, beta subunit [Campylobacter lari RM2100] gi|254808137|sp|B9KES3|ATPB_CAMLR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|222538457|gb|ACM63558.1| ATP synthase F1 sector, beta subunit [Campylobacter lari RM2100] Length = 484 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 160/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N G ID + + D I PP + + F+TGI+V+D+ P G Sbjct: 88 GRIFNVTGDLIDEGEEI-NFDKHWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 147 KVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKVA 206 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G +P Sbjct: 207 LCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRIP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD V Sbjct: 267 SAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATTV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 LNRS+AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I G Sbjct: 325 LNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382 >gi|332971779|gb|EGK10727.1| ATP synthase F1 sector beta subunit [Desmospora sp. 8437] Length = 469 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 160/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PID D + + + I P N E+ +TGI+V+D+ P G Sbjct: 92 LGRVFNVLGDPIDEQDQV-QSETHYSIHRPAPSYENLSTQEEVLETGIKVVDLLAPYAKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + +S+ VGER RE + + L+K+ Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNVALQHGGLSVFAGVGERTREGNDLYHEMKDAGVLEKT 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G + Sbjct: 211 TMVFGQMNEPPGARMRVALTGLTMAEFFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRM 270 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 271 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 328 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L RSLA + +P VDPLAS SR+ A +E V+ + ++ R++E +DI I G Sbjct: 329 NLERSLAAKAIFPAVDPLASTSRILTPAVVGEEHYSVARGVQEVLQRYKELQDIIAILG 387 >gi|77920721|ref|YP_358536.1| F0F1 ATP synthase subunit beta [Pelobacter carbinolicus DSM 2380] gi|118573500|sp|Q39ZU1|ATPB3_PELCD RecName: Full=ATP synthase subunit beta 3; AltName: Full=ATP synthase F1 sector subunit beta 3; AltName: Full=F-ATPase subunit beta 3 gi|77546804|gb|ABA90366.1| ATP synthase F1 subcomplex beta subunit [Pelobacter carbinolicus DSM 2380] Length = 468 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 167/301 (55%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + + D + EI P +++ + F+TGI+V+D+ P G Sbjct: 90 LGRILNVIGEPVDEQGPV-ETDTTWEIHRPTPEFVDQSTKVEAFETGIKVVDLLAPYARG 148 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 +IG+F G+G+GK+ L+ ++ + F + + VGER RE + + N L Sbjct: 149 GKIGLFGGAGVGKTVLIMELIHNIAKKHGGFS--VFAGVGERTREGNDLWNEMKESNVLD 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L+A+T+AEYF + +VLL +D+I RF + E++ G Sbjct: 207 KTALVYGQMNEPPGARARVALSALTVAEYFRDQENQDVLLFVDNIFRFTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V ++ V D+ DP + + LD Sbjct: 267 RIPSAVGYQPTLSTEMGELQERI--TTTKHGSITSVQAIYVPADDLTDPAPATTFAHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+R +AE G YP VDPL S SR+ D +E V+ + +++ R+++ +DI I Sbjct: 325 TTVLSRQIAELGIYPAVDPLDSSSRILDPQVLGEEHYQVARDVQYVLQRYKDLQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|308189785|ref|YP_003922716.1| ATP synthase beta chain [Mycoplasma fermentans JER] gi|319777003|ref|YP_004136654.1| ATP synthase subunit beta [Mycoplasma fermentans M64] gi|238809784|dbj|BAH69574.1| hypothetical protein [Mycoplasma fermentans PG18] gi|307624527|gb|ADN68832.1| ATP synthase beta chain [Mycoplasma fermentans JER] gi|318038078|gb|ADV34277.1| ATP synthase subunit beta [Mycoplasma fermentans M64] Length = 502 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 163/299 (54%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ + LG+PID ++ K L M I + P ++ V + +TGI+VID+ P G Sbjct: 118 LGRMFDVLGQPIDLQEA-PKAPL-MPIHASAPSYEEQKTVSEVLETGIKVIDLLIPYAKG 175 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + +S+ VGER RE + + L K+ Sbjct: 176 GKIGLFGGAGVGKTVLVQELINNIATEHGGLSVFAGVGERTREGNDLYHEMKAAGVLDKT 235 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 236 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKENQDVLLFIDNIFRFTQAGSEVSALLGRM 295 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +G+IT+V +V V D+ DP + S LD Sbjct: 296 PSAVGYQPTLATEMGQLQERI--TSTRRGSITSVQAVYVPADDLTDPAPATTFSHLDAKT 353 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G YP VDPL S SRL D E ++ + +++ RF+E +DI I G Sbjct: 354 VLDRNIAALGIYPAVDPLESNSRLLDPLVVGQEHYEVAHGVVNILQRFKELQDIIAILG 412 >gi|317011330|gb|ADU85077.1| F0F1 ATP synthase subunit beta [Helicobacter pylori SouthAfrica7] Length = 466 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + + K L+ I K P + + F+TGI+VID+ P G Sbjct: 87 LGRIFNVVGESIDNLEPI-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDKKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 382 >gi|154173677|ref|YP_001408809.1| F0F1 ATP synthase subunit beta [Campylobacter curvus 525.92] gi|190358268|sp|A7H017|ATPB_CAMC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|112803722|gb|EAU01066.1| ATP synthase F1, beta subunit [Campylobacter curvus 525.92] Length = 465 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G ID + + + D I PP + + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVVGDLIDEGEGV-EFDKHWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR++AE+G YP VDPL S SR+ D + D K+ + ++ ++++ +DI I G Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDPQILGEDHYKVARGVQAVLQKYKDLQDIIAILG 382 >gi|56421893|ref|YP_149211.1| F0F1 ATP synthase subunit beta [Geobacillus kaustophilus HTA426] gi|261420763|ref|YP_003254445.1| F0F1 ATP synthase subunit beta [Geobacillus sp. Y412MC61] gi|297531558|ref|YP_003672833.1| ATP synthase F1 subunit beta [Geobacillus sp. C56-T3] gi|319768433|ref|YP_004133934.1| ATP synthase F1 subunit beta [Geobacillus sp. Y412MC52] gi|81819603|sp|Q5KUJ3|ATPB_GEOKA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|56381735|dbj|BAD77643.1| F0F1-type ATP synthasebeta chain [Geobacillus kaustophilus HTA426] gi|261377220|gb|ACX79963.1| ATP synthase F1, beta subunit [Geobacillus sp. Y412MC61] gi|297254810|gb|ADI28256.1| ATP synthase F1, beta subunit [Geobacillus sp. C56-T3] gi|317113299|gb|ADU95791.1| ATP synthase F1, beta subunit [Geobacillus sp. Y412MC52] Length = 473 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 110/332 (33%), Positives = 176/332 (53%), Gaps = 19/332 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+PID + + D + + + P E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHE-MKDSGV 207 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 + K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 208 ISKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSAL 267 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ +L ERI + KG+IT++ ++ V D++ DP + S L Sbjct: 268 LGRMPSAVGYQPTLATEMGQLQERI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHL 325 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 D L R LAE G YP VDPLAS SR LA + + ++ + + R++E +DI Sbjct: 326 DATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIA 385 Query: 392 IGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + D+ VH+ I FL Q+ Sbjct: 386 I----LGMDELSDEDKLVVHRARRIQFFLSQN 413 >gi|148377622|ref|YP_001256498.1| F0F1 ATP synthase subunit beta [Mycoplasma agalactiae PG2] gi|148291668|emb|CAL59054.1| ATP synthase beta chain [Mycoplasma agalactiae PG2] Length = 487 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ + LG PID D+ M I + P + + F+TGI+VID+ P G Sbjct: 99 LGRMFDVLGNPIDLKDA--PDAEKMPIHAPAPSYEEQSTESEIFETGIKVIDLLVPYVKG 156 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + +S+ VGER RE + + L L+K+ Sbjct: 157 GKIGLFGGAGVGKTVLVQELINNIAREHGGLSVFAGVGERTREGNDLYNEMLASGVLEKT 216 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 217 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKEKQDVLLFIDNIFRFTQAGSEVSALLGRM 276 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + K G+IT+V +V V D+ DP + + LD Sbjct: 277 PSAVGYQPTLATEMGQLQERIASTNK--GSITSVQAVYVPADDLTDPAPATTFNHLDAKT 334 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G YP VDPL S SRL D E + + ++ RF+E +DI I G Sbjct: 335 VLDRNIAALGIYPAVDPLESSSRLLDSLVIGQEHYETARRVVSILQRFKELQDIIAILG 393 >gi|148245074|ref|YP_001219768.1| F0F1 ATP synthase subunit beta [Candidatus Vesicomyosocius okutanii HA] gi|166222425|sp|A5CVI6|ATPB_VESOH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|146326901|dbj|BAF62044.1| F0F1-type ATP synthase beta subunit [Candidatus Vesicomyosocius okutanii HA] Length = 459 Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 160/298 (53%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ ++ I P + +TGI+VID+ P G Sbjct: 83 LGRIMNVLGEPIDNAGEIGQ-EVDWTIHRSAPDYDELAPTTELLETGIKVIDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIAHSGYSVFAGVGERTREGNDFYHEMKESNVLNKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF +G +VLL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ SE+ L ERI + +KG+IT++ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLASEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR D +E V+ + ++ R++E +DI I G Sbjct: 320 LSRQVAELGIYPAVDPLDSTSRQLDPLIVGEEHYNVARGVQGVLQRYKELKDIIAILG 377 >gi|297380310|gb|ADI35197.1| ATP synthase F1, beta subunit [Helicobacter pylori v225d] Length = 469 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + + K L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPI-KPSLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|269123790|ref|YP_003306367.1| ATP synthase F1, beta subunit [Streptobacillus moniliformis DSM 12112] gi|268315116|gb|ACZ01490.1| ATP synthase F1, beta subunit [Streptobacillus moniliformis DSM 12112] Length = 464 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 103/316 (32%), Positives = 166/316 (52%), Gaps = 9/316 (2%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D++ G ++ GR+ N LG+ +D D + + I K P ++ + Sbjct: 68 DVIDTGGPIKVPVGKETLGRIFNVLGETVDNGDEIITEE-RHSIHKKAPEFEEQETHSEI 126 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 +TGI+V+D+ P G +IG+F G+G+GK+ L+ + +S+ VGER RE Sbjct: 127 LETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTRE 186 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSI 259 R+ + + K+ +V +E P R L+A+T+AEYF K G NVLL +D+I Sbjct: 187 GRDLYNEMRESGVINKTALVYGQMNEPPGARLRVALSALTMAEYFRDKEGQNVLLFIDNI 246 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ L ERI + +KG+IT+V +V V D+ Sbjct: 247 FRFTQAGSEVSALLGRMPSAVGYQPNLATDMGALQERI--TSTKKGSITSVQAVYVPADD 304 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 DP + S LD VL+R +A G YP VDPLAS SR+ + +E K+ Sbjct: 305 LTDPAPATTFSHLDATTVLSRQIASLGIYPAVDPLASTSRILEAEIVGNEHYKVARETVK 364 Query: 379 LIHRFEETRDIRLIGG 394 ++ R++E +DI I G Sbjct: 365 VLQRYKELQDIIAILG 380 >gi|313681887|ref|YP_004059625.1| ATP synthase f1 subcomplex beta subunit [Sulfuricurvum kujiense DSM 16994] gi|313154747|gb|ADR33425.1| ATP synthase F1 subcomplex beta subunit [Sulfuricurvum kujiense DSM 16994] Length = 466 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 103/298 (34%), Positives = 162/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+ IDG D + D + I PP +++ + F+TGI+V+D+ P G Sbjct: 88 GRIFNVIGETIDGGDQITDCD-TWSIHRDPPPLVDQSTKTEMFETGIKVVDLLAPYGKGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ ++ + +S+ VGER RE + + + L K Sbjct: 147 KVGLFGGAGVGKTVIIMELINNVAQGHSGLSVFAGVGERTREGNDLYHEMKESSVLDKVA 206 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 + E P R LT +T+AEYF KG +VL+ +D+I RFA S E++ G +P Sbjct: 207 LCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVLMFIDNIFRFAQSGSEMSALLGRIP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L +RI + +KG+IT+V +V V D+ DP SV + LD V Sbjct: 267 SAVGYQPTLAREMGALQDRI--TSTKKGSITSVQAVYVPADDLTDPAPASVFAHLDATTV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 LNR +AE+G YP VDPL S SRL D +E V+ + + ++++ +DI I G Sbjct: 325 LNRKIAEKGIYPAVDPLDSTSRLLDPQIIGEEHYNVARGVQKTLQKYKDLQDIIAILG 382 >gi|42558884|sp|Q9LA80|ATPB_GEOTH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|7578511|gb|AAF64075.1|AF147781_1 ATP synthase beta subunit [Geobacillus thermoleovorans] Length = 473 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 109/331 (32%), Positives = 173/331 (52%), Gaps = 17/331 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+PID + + D + + + P E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + KG+IT++ ++ V D++ DP + S LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R LAE G YP VDPLAS SR LA + + ++ + + R++E +DI I Sbjct: 327 ATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAI 386 Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ VH+ I FL Q+ Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413 >gi|238917847|ref|YP_002931364.1| ATP synthase [Eubacterium eligens ATCC 27750] gi|238873207|gb|ACR72917.1| ATP synthase [Eubacterium eligens ATCC 27750] Length = 475 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+PID + + M I K P + + +TGI+V+D+ P G Sbjct: 101 GRMFNVLGEPID-NKPAPEVQEHMPIHRKAPAFAEQATNTEILETGIKVVDLLCPYQKGG 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ R+ + + + VGER RE + + + ++K+ Sbjct: 160 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMMESGVIEKTT 219 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L +T+AEYF KG +VLL +D+I RF + E++ G +P Sbjct: 220 MVFGQMNEPPGARMRVGLAGLTMAEYFRDKGGKDVLLFIDNIYRFTQAGSEVSALLGRMP 279 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD V Sbjct: 280 SAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 337 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ E G YP VDPL S SR+ D +E K+ S+ ++ +++E +DI I G Sbjct: 338 LSRSIVELGIYPAVDPLESTSRILDPRIVGEEHYKVARSVQEILQKYKELQDIIAILG 395 >gi|187777253|ref|ZP_02993726.1| hypothetical protein CLOSPO_00805 [Clostridium sporogenes ATCC 15579] gi|187774181|gb|EDU37983.1| hypothetical protein CLOSPO_00805 [Clostridium sporogenes ATCC 15579] Length = 462 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 106/299 (35%), Positives = 163/299 (54%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG PID + S I + P+ Q VE F+TGI+VID+ P Sbjct: 86 LGRLFNVLGNPIDEVGEFTSNE-SYPI-HRSAPSFEEQSVEPEIFETGIKVIDLLAPYQK 143 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E L+K Sbjct: 144 GGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVLEK 203 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +V +E P R LT +T++EYF +G +VLL +D+I RF + E++ G + Sbjct: 204 TALVFGQMNEPPGARMRVALTGLTMSEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRI 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLATEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D +E V+ + +++ R+ E +DI I G Sbjct: 322 VLSRSIAELGIYPAVDPLESSSRMLDPRIIGEEHYDVAIKVKNILERYRELQDIIAILG 380 >gi|94986847|ref|YP_594780.1| F0F1 ATP synthase subunit beta [Lawsonia intracellularis PHE/MN1-00] gi|118573693|sp|Q1MRB8|ATPB_LAWIP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|94731096|emb|CAJ54458.1| proton ATPase beta subunit [Lawsonia intracellularis PHE/MN1-00] Length = 471 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 112/336 (33%), Positives = 178/336 (52%), Gaps = 14/336 (4%) Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLS- 125 DIV + E + G V G ++P GR++N +G+PIDG LG D Sbjct: 56 DIVRTIAMDATEGLKRGMDVLDTGHPIMAPVGKASLGRIMNVVGQPIDG---LGVIDTKT 112 Query: 126 -MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 + I K P +++ + +TGI+VID+ P G ++G+F G+G+GK+ +L + Sbjct: 113 YLPIHRKPPSFLDQNTSVEPLETGIKVIDLLVPFPKGGKMGLFGGAGVGKTVILMEMINN 172 Query: 185 DCFDKVIISL---VGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVT 240 IS+ VGER RE + + L+K+++V +E P R LTA+T Sbjct: 173 IARQHGGISVFAGVGERTREGNDLYHEMKEAGVLEKAILVYGQMNEPPGARSRVALTALT 232 Query: 241 IAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 AEYF + +VLL +D+I RF + E++ G +P A GY ++ ++L L ERI Sbjct: 233 CAEYFRDEEHQDVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLGTDLGSLEERI-- 290 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + G+IT+V +V V D+ DP + S LDG +VL+R +AE G YP VDPL S SR Sbjct: 291 TSTHNGSITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSR 350 Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + + + +E V+ + ++ +++E +DI I G Sbjct: 351 ILEPNFVGEEHYTVARGVQKILQKYKELQDIIAILG 386 >gi|226324289|ref|ZP_03799807.1| hypothetical protein COPCOM_02069 [Coprococcus comes ATCC 27758] gi|225206737|gb|EEG89091.1| hypothetical protein COPCOM_02069 [Coprococcus comes ATCC 27758] Length = 611 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 109/325 (33%), Positives = 173/325 (53%), Gaps = 13/325 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + + K D ++ + PP+ Q V + +TGI+VID+ P G Sbjct: 90 GRLFNVLGETIDNGEEI-KEDTEHWVIHRDPPSFEDQSPVVEILETGIKVIDLLAPYAKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ R+ + I + VGER RE + + L K+ Sbjct: 149 GKIGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGVGERSREGNDLWTEMKASGVLDKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF K NVLL +D+I RF + E++ G + Sbjct: 209 ALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G++T+V +V V D+ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGELQERIAST--KNGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R + E+G YP VDPL S SR+ + +E ++ + +T ++ +++E +DI I G Sbjct: 327 VLSRKVVEQGIYPAVDPLESNSRILEADIVGEEHYEVANRVTEVLQKYKELQDIIAILGM 386 Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ 419 D DKA V + I FL Q Sbjct: 387 EELSD--EDKATVMRARKIQKFLSQ 409 >gi|226324167|ref|ZP_03799685.1| hypothetical protein COPCOM_01946 [Coprococcus comes ATCC 27758] gi|225207716|gb|EEG90070.1| hypothetical protein COPCOM_01946 [Coprococcus comes ATCC 27758] Length = 463 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 107/335 (31%), Positives = 175/335 (52%), Gaps = 12/335 (3%) Query: 68 DIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 DIV +G + + G D V G + GR+ N LG+PID ++ D+ Sbjct: 54 DIVRCIAMGPTDGLVRGMDAVATGGPISVPVGEATLGRIFNVLGEPIDEKEA--PKDVEY 111 Query: 127 EIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSD 185 + + P+ Q + + +TGI+V+D+ P G +IG+F G+G+GK+ L+ + Sbjct: 112 APIHRKAPSFEEQATQTEMLETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELITNI 171 Query: 186 CFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTI 241 + + + VGER RE + + E +KK+ +V +E P R LT +T+ Sbjct: 172 ATEHGGYSVFTGVGERTREGNDLYYEMTESGVIKKTAMVFGQMNEPPGARMRVGLTGLTL 231 Query: 242 AEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 AEYF KG +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI + Sbjct: 232 AEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--T 289 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + G+IT+V +V V D+ DP + + LD VL+R++ E G YP VDPL S SR+ Sbjct: 290 STKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAITELGIYPAVDPLESTSRI 349 Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D +E K+ + ++ +++E +DI I G Sbjct: 350 LDPHIVGEEHYKVARGVQEILQKYKELQDIIAILG 384 >gi|237751193|ref|ZP_04581673.1| ATP synthase subunit beta [Helicobacter bilis ATCC 43879] gi|229372559|gb|EEO22950.1| ATP synthase subunit beta [Helicobacter bilis ATCC 43879] Length = 469 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 160/294 (54%), Gaps = 9/294 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ +D + + K + I + P N+ + F+TGI+V+D+ P G Sbjct: 89 LGRIFNVIGEVVDDGEPV-KAAVKWPIHRESPSFDNQSTKTEMFETGIKVVDLLAPYSKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + L K Sbjct: 148 GKVGLFGGAGVGKTVVIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKV 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 208 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ +L ERI + + G+IT+V +V V D+ DP SV S LD Sbjct: 268 PSAVGYQPTLASEMGKLQERI--TSTKNGSITSVQAVYVPADDLTDPAPASVFSHLDAKT 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 VLNR +AE+G YP VDPL S SR+ D +E K+ + + ++ ++++ +DI Sbjct: 326 VLNRKIAEKGIYPAVDPLDSSSRILDPQVVGEEHYKIATGIQQVLQKYKDLQDI 379 >gi|160872202|ref|ZP_02062334.1| ATP synthase F1, beta subunit [Rickettsiella grylli] gi|159121001|gb|EDP46339.1| ATP synthase F1, beta subunit [Rickettsiella grylli] Length = 463 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 165/299 (55%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GR+++ LGKPID + + ++ + I K PP + Q V E+ +TGI+VID+ P Sbjct: 88 LGRIMDVLGKPIDEAGPIHE-EIRLPIHRK-PPTFSEQAVNEQLLETGIKVIDLLCPFAK 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 146 GGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G ++LL +D+I R+ + E++ G + Sbjct: 206 VSLVYGQMNEPPGNRLRVALTGLTVAEYFRDEGRDILLFIDNIYRYTLAGVEVSALLGRM 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + LD + Sbjct: 266 PSAVGYQPTLAAEMGALQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATV 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP +DPL S SR D E V+ ++ + RF+E +DI I G Sbjct: 324 VLSRQIAELGIYPAIDPLDSNSRQLDPLIVGQEHYDVARAVQKTLQRFKELKDIIAILG 382 >gi|291320299|ref|YP_003515561.1| ATP synthase subunit beta [Mycoplasma agalactiae] gi|290752632|emb|CBH40605.1| ATP synthase beta chain [Mycoplasma agalactiae] Length = 487 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/299 (34%), Positives = 159/299 (53%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ + LG PID D+ M I + P + + F+TGI+VID+ P G Sbjct: 99 LGRMFDVLGNPIDLKDA--PDAEKMPIHAPAPSYEEQSTESEIFETGIKVIDLLVPYVKG 156 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + +S+ VGER RE + + L L+K+ Sbjct: 157 GKIGLFGGAGVGKTVLVQELINNIAREHGGLSVFAGVGERTREGNDLYNEMLASGVLEKT 216 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 217 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKEKQDVLLFIDNIFRFTQAGSEVSALLGRM 276 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + K G+IT+V +V V D+ DP + + LD Sbjct: 277 PSAVGYQPTLATEMGQLQERIASTNK--GSITSVQAVYVPADDLTDPAPATTFNHLDAKT 334 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G YP VDPL S SRL D E + + ++ RF+E +DI I G Sbjct: 335 VLDRNIAALGIYPAVDPLESSSRLLDPLVIGQEHYETARRVVSILQRFKELQDIIAILG 393 >gi|186475894|ref|YP_001857364.1| F0F1 ATP synthase subunit beta [Burkholderia phymatum STM815] gi|184192353|gb|ACC70318.1| ATP synthase F1, beta subunit [Burkholderia phymatum STM815] Length = 489 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 106/306 (34%), Positives = 164/306 (53%), Gaps = 11/306 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ + G D L + D+ + + PPA+ QR + F TGI++ID+ TPL HG Sbjct: 103 GRLFDVSGTVRDSGAPLPR-DVERRAIHRAPPALAAQRGATRLFATGIKMIDLLTPLAHG 161 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 + +F G+G+GK+ L+ + IS+ VGER RE E + D L ++ Sbjct: 162 GKAAMFGGAGVGKTVLVMELIHAMAEQHSGISVFAGVGERSREGHEMLADMRSSGVLPRA 221 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 V+V +E P R PLTA+TIAEYF + NVLL++D++ RF + E++ G + Sbjct: 222 VLVYGQMNEPPGARWRVPLTALTIAEYFRDEHHQNVLLLMDNVFRFVQAGAEVSGLLGRM 281 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P GY ++ SE+ L ERI + + +TA+ +V V D+ DP ++ S +D + Sbjct: 282 PSRVGYQPTLASEVAALQERI--ASVGETAVTAIEAVYVPADDFTDPAVTTISSHVDSMV 339 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK-LVSSLTHLIHRFEETRD-IRLIGG 394 VL+R+ A EG YP +DP+AS S L D DE + +++ +I E +D I L+G Sbjct: 340 VLSRAQAAEGMYPAIDPIASTSVLLDPLVVGDEHADVANAVRRVIEHQRELQDVIALLGI 399 Query: 395 YRPGVD 400 G D Sbjct: 400 EELGAD 405 >gi|109947169|ref|YP_664397.1| F0F1 ATP synthase subunit beta [Helicobacter acinonychis str. Sheeba] gi|123362703|sp|Q17Y78|ATPB_HELAH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|109714390|emb|CAJ99398.1| ATP synthase F1 sector beta subunit [Helicobacter acinonychis str. Sheeba] Length = 466 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L K L I K P + + F+TGI+VID+ P G Sbjct: 87 LGRIFNVVGESIDNLEPL-KPSLIWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 382 >gi|118579930|ref|YP_901180.1| F0F1 ATP synthase subunit beta [Pelobacter propionicus DSM 2379] gi|190358235|sp|A1AP52|ATPB2_PELPD RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|118502640|gb|ABK99122.1| ATP synthase F1 subcomplex beta subunit [Pelobacter propionicus DSM 2379] Length = 471 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 12/319 (3%) Query: 84 GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G V G+ +P GR+IN +G+P+D +G D I + PP ++ Sbjct: 73 GQAVLDTGKQICAPVGKKTLGRIINVIGEPVDEMGPIGN-DKENPIHREAPPFEDQSTKV 131 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGER 198 + F TGI+V+D+ P G +IG+F G+G+GK+ L+ + AR V VGER Sbjct: 132 EAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARQHGGFSVFAG-VGER 190 Query: 199 GREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 RE + ++E L+K+ +V +E P R LTA++IAE+F +G +VLL + Sbjct: 191 TREGNDLWMEMKETGVLEKTALVYGQMNEPPGARARVALTALSIAEHFRDDEGLDVLLFI 250 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +E+ L ERI + + G+IT+V ++ V Sbjct: 251 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTKNGSITSVQAIYVP 308 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S SR+ D +E ++ Sbjct: 309 ADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQIIGEEHYAIARQ 368 Query: 376 LTHLIHRFEETRDIRLIGG 394 + +++ ++++ +DI I G Sbjct: 369 VQYILQKYKDLQDIIAILG 387 >gi|307729793|ref|YP_003907017.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1003] gi|307584328|gb|ADN57726.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1003] Length = 496 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 164/294 (55%), Gaps = 10/294 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+I+ G DG D+L I PP +++ F TGI+VID+ TPL G Sbjct: 107 GRLIDVTGTACDGGDALDTQVERRPIHRAAPPLSSQKGATVLFSTGIKVIDLLTPLAQGG 166 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217 + +F G+G+GK+ L+ + A + ++ + + + +GER RE E + D +G + L ++ Sbjct: 167 KAAMFGGAGVGKTVLVMELIHAMVEHYEGISVFAGIGERSREGHEMLLD-MGTSGVLART 225 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 V+V +E P R P TA+TIAEYF + NVLL++D++ RF + E++ G + Sbjct: 226 VLVYGQMNEPPGARWRVPFTALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRM 285 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P GY ++ SE+ +L ERI +++A+ +V V D+ DP ++ + LD ++ Sbjct: 286 PSRVGYQPTLASEVAQLQERI--VSVGGVSVSAIEAVYVPADDFTDPAVTAIAAHLDSNV 343 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 VL+R++A EG YP VDP+AS S L D E V++ + +I + E +D+ Sbjct: 344 VLSRAMAAEGMYPAVDPIASSSILLDPLVVGGEHAAVATEVRRVIEHYRELQDV 397 >gi|322434786|ref|YP_004216998.1| ATP synthase F1, beta subunit [Acidobacterium sp. MP5ACTX9] gi|321162513|gb|ADW68218.1| ATP synthase F1, beta subunit [Acidobacterium sp. MP5ACTX9] Length = 479 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 105/308 (34%), Positives = 164/308 (53%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV+N LG+P+D LG + M I + P + E+ F+TGI+VID+ P Sbjct: 93 LGRVLNVLGEPVD---ELGPVNAKVHMPIHRQAPAFDEQSTSEEMFETGIKVIDLIQPFL 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGD 212 G +IG+F G+G+GK+ ++ + + + VGER RE EF E + D Sbjct: 150 KGGKIGLFGGAGVGKTVVIQELINNVAQQHGGFSVFAGVGERTREGNDLWHEFQESGVID 209 Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 N K+ ++ E P R LT +T+AEYF +G + LL +D+I RF + Sbjct: 210 INDFNKSKAALIYGQMTEPPGARLRVALTGLTVAEYFRDEEGADTLLFIDNIFRFTQAGS 269 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++T G +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + Sbjct: 270 EVSTLLGRMPSAVGYQPNLATEMGELQERI--TSTKKGSITSVQAVYVPADDLTDPAPAT 327 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R L+E G YP VDPLAS SR L+ + + + + ++ R+++ Sbjct: 328 TFAHLDATTVLSRPLSELGIYPAVDPLASTSRILSPRVVGQEHYDVAQGVKRILQRYKDL 387 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 388 QDIIAILG 395 >gi|308183236|ref|YP_003927363.1| F0F1 ATP synthase subunit beta [Helicobacter pylori PeCan4] gi|308065421|gb|ADO07313.1| F0F1 ATP synthase subunit beta [Helicobacter pylori PeCan4] Length = 469 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 161/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + L L+ I K P + + F+TGI+VID+ P G Sbjct: 90 LGRIFNVVGESIDNLEPLNP-SLTWPIHRKAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 149 GKVGLFGGAGVGKTVIIMELIHNVAYKHNGYSVFAGVGERTREGNDLYFEMKEGGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG +VL+ +D+I R+A S E++ G + Sbjct: 209 ALCYGQMNEPPGARNRIAFTGLTMAEYFRDEKGLDVLMFIDNIFRYAQSGAEMSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI ++ G+IT+V +V V D+ DP SV + LD Sbjct: 269 PSAVGYQPTLAGEMGKLQERIASTKN--GSITSVQAVYVPADDLTDPAPASVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR L+ + ++ + + ++ ++++ +DI I G Sbjct: 327 VLNRKIAEKGIYPAVDPLDSTSRILSPQMIGEKHYEIATGIQQVLQKYKDLQDIIAILG 385 >gi|302875870|ref|YP_003844503.1| ATP synthase F1, beta subunit [Clostridium cellulovorans 743B] gi|307689303|ref|ZP_07631749.1| F0F1 ATP synthase subunit beta [Clostridium cellulovorans 743B] gi|302578727|gb|ADL52739.1| ATP synthase F1, beta subunit [Clostridium cellulovorans 743B] Length = 466 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/305 (33%), Positives = 166/305 (54%), Gaps = 18/305 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRV-EKGFKTGIRVIDIF 155 GR+ N LG+PID KG++ + M + PP+ Q ++ F+TGI+VID+ Sbjct: 86 ATLGRLFNTLGQPIDN-----KGEVVSDTMYPIHRNPPSFEDQSSKQEMFETGIKVIDLL 140 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + + D Sbjct: 141 APYQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYHE-MSD 199 Query: 213 N--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + + K+ +V +E P R LT +T+AE F KG +VLL +D+I RF + E++ Sbjct: 200 SGVISKTALVFGQMNEPPGARMRVALTGLTMAENFRDKGQDVLLFIDNIFRFTQAGSEVS 259 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 260 ALLGRIPSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFA 317 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R++ E G YP VDPL S SR+ D E + + +++ R++E +DI Sbjct: 318 HLDATTVLSRAIVEIGIYPAVDPLESTSRILDPRIVGKEHYETALEVKNILERYKELQDI 377 Query: 390 RLIGG 394 I G Sbjct: 378 IAILG 382 >gi|323339972|ref|ZP_08080239.1| ATP synthase F1 sector beta subunit [Lactobacillus ruminis ATCC 25644] gi|323092614|gb|EFZ35219.1| ATP synthase F1 sector beta subunit [Lactobacillus ruminis ATCC 25644] Length = 467 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 158/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PID + I P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGEPIDNGPEFEEDHRRDPIHRDAPSYEELSTGTEILETGIKVIDLLAPYIKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E L+K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYYEMKESGVLEKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L R+L ++G YP VDPLAS S L+ + + ++ + + H++ R+ E +DI Sbjct: 325 NLERALTQQGIYPAVDPLASTSSALSPEIVGEEHYQVATEVQHVLQRYRELQDI 378 >gi|82701444|ref|YP_411010.1| F0F1 ATP synthase subunit beta [Nitrosospira multiformis ATCC 25196] gi|118573707|sp|Q2YCA3|ATPB1_NITMU RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|82409509|gb|ABB73618.1| ATP synthase F1, beta subunit [Nitrosospira multiformis ATCC 25196] Length = 459 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 106/332 (31%), Positives = 169/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G E + G +V + G + R+ GR+++ LG PID +G + + Sbjct: 49 VVRTIALGSSEGLRRGMMVTNTGDQIRVPVGTKTLGRIMDVLGTPIDEMGPIG-AEQNRS 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I K P + +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 108 IHQKAPAFDELSASTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 167 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + N L K +V +E P R LT +T+AE Sbjct: 168 EHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAE 227 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 +F +G +VLL +D+I RF + E++ G +P A GY ++ E+ RL ERI + + Sbjct: 228 HFRDEGRDVLLFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTK 285 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT++ +V V D+ DP + LD +VL+R +A G YP VDPL S SR D Sbjct: 286 SGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E ++ + R++E RDI I G Sbjct: 346 LVVGEEHYSTARAVQQTLQRYKELRDIIAILG 377 >gi|182420269|ref|ZP_02951498.1| ATP synthase F1, beta subunit [Clostridium butyricum 5521] gi|237666447|ref|ZP_04526432.1| ATP synthase F1, beta subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182375864|gb|EDT73456.1| ATP synthase F1, beta subunit [Clostridium butyricum 5521] gi|237657646|gb|EEP55201.1| ATP synthase F1, beta subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 463 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N LG PID ++ G + + P+ Q VE + F+TGI+VID+ P Sbjct: 87 LGRLFNVLGNPID--NAGGVDAKESYPIHRPAPSFKDQAVEPEMFETGIKVIDLLAPYQK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G + G+F G+G+GK+ L+ + + +S+ VGER RE + + + K Sbjct: 145 GGKTGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERSREGNDLYHEMKDSGVIDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ G Sbjct: 205 TALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALLGRT 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 265 PSAVGYQPTLATEMGALQERI--TSTVNGSITSVQAVYVPADDLTDPAPATTFTHLDAKT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+ E G YP VDPL S SR+ D DE K+ + + +++ ++++ +DI I G Sbjct: 323 VLSRSIVELGIYPAVDPLESSSRMLDPRIVGDEHYKVATEVKNVLEKYKQLQDIIAILG 381 >gi|327385389|gb|AEA56863.1| F1F0-ATPase subunit beta [Lactobacillus casei BD-II] Length = 587 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 98/293 (33%), Positives = 155/293 (52%), Gaps = 8/293 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LG PIDG ++ G I P + + +TGI+VID+ P G Sbjct: 189 GRVFNVLGDPIDGGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRGG 248 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E L+ + Sbjct: 249 KVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENTA 308 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G +P Sbjct: 309 MVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRIP 368 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 369 SAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATTN 426 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S DE K+ + + ++ R+ E +DI Sbjct: 427 LERRLTEQGIYPAVDPLESSSSALTPEIVGDEHYKVATEVQQVLQRYRELQDI 479 >gi|118474804|ref|YP_892659.1| F0F1 ATP synthase subunit beta [Campylobacter fetus subsp. fetus 82-40] gi|190358269|sp|A0RR26|ATPB_CAMFF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118414030|gb|ABK82450.1| ATP synthase F1, beta subunit [Campylobacter fetus subsp. fetus 82-40] Length = 465 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 104/301 (34%), Positives = 165/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N +G ID G++ K D I + PPA Q + F+TGI+V+D+ P Sbjct: 87 LGRIFNVIGDLIDEGEEE--KFDKKWSI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYA 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ ++ + F + + VGER RE + + L Sbjct: 144 KGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESGVLD 203 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G Sbjct: 204 KVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLG 263 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ SE+ RL ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 264 RIPSAVGYQPTLASEMGRLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDA 321 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 VLNR++AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I Sbjct: 322 TTVLNRAIAEKGIYPAVDPLDSTSRMLDPQILGEEHYKIARGVQAVLQKYKDLQDIIAIL 381 Query: 394 G 394 G Sbjct: 382 G 382 >gi|118579045|ref|YP_900295.1| F0F1 ATP synthase subunit beta [Pelobacter propionicus DSM 2379] gi|190358211|sp|A1ALL7|ATPB1_PELPD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|118501755|gb|ABK98237.1| ATP synthase F1 subcomplex beta subunit [Pelobacter propionicus DSM 2379] Length = 471 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 12/319 (3%) Query: 84 GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G V G+ +P GR+IN +G+P+D +G D I + PP ++ Sbjct: 73 GQAVLDTGKQICAPVGKKTLGRIINVIGEPVDEMGPIGN-DKENPIHREAPPFEDQSTKV 131 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGER 198 + F TGI+V+D+ P G +IG+F G+G+GK+ L+ + AR V VGER Sbjct: 132 EAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIARQHGGFSVFAG-VGER 190 Query: 199 GREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 RE + ++E L+K+ +V +E P R LTA++IAE+F +G +VLL + Sbjct: 191 TREGNDLWMEMKETGVLEKTALVYGQMNEPPGARARVALTALSIAEHFRDDEGLDVLLFI 250 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +E+ L ERI + + G+IT+V ++ V Sbjct: 251 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERI--TSTKNGSITSVQAIYVP 308 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S SR+ D +E ++ Sbjct: 309 ADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYAIARQ 368 Query: 376 LTHLIHRFEETRDIRLIGG 394 + +++ ++++ +DI I G Sbjct: 369 VQYILQKYKDLQDIIAILG 387 >gi|223038732|ref|ZP_03609025.1| ATP synthase F1, beta subunit [Campylobacter rectus RM3267] gi|222880134|gb|EEF15222.1| ATP synthase F1, beta subunit [Campylobacter rectus RM3267] Length = 465 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G ID + + + D I PP + + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVVGDLIDEGEGI-EFDKKWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR++AE+G YP VDPL S SR+ D + + K+ + ++ ++++ +DI I G Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDPQILGGEHYKVARGVQAVLQKYKDLQDIIAILG 382 >gi|169335794|ref|ZP_02862987.1| hypothetical protein ANASTE_02219 [Anaerofustis stercorihominis DSM 17244] gi|169258532|gb|EDS72498.1| hypothetical protein ANASTE_02219 [Anaerofustis stercorihominis DSM 17244] Length = 470 Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 167/299 (55%), Gaps = 10/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PIDG + + D+ + + + P+ Q V + F+TGI+V+D+ P G Sbjct: 88 GRMVNVLGQPIDGKE-MDLSDVKLSPIHREAPSFEEMQTVPEIFETGIKVVDLICPYTKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E L K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELISNIATEHGGLSVFAGVGERTREGNDLYYEMKESGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R LT +T+AE+F + +VLL +D+I RF + E++ G + Sbjct: 207 SLCFGQMNEPPGARMRVALTGLTMAEHFRDEENQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R+++E+G YP VDPL S SR+ D K + ++ + ++ R++E +DI I G Sbjct: 325 VLDRAISEKGIYPAVDPLGSTSRILDPKVVGEEHYQIARGVQEILQRYKELQDIIAILG 383 >gi|255321979|ref|ZP_05363129.1| ATP synthase F1, beta subunit [Campylobacter showae RM3277] gi|255301083|gb|EET80350.1| ATP synthase F1, beta subunit [Campylobacter showae RM3277] Length = 465 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 162/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G ID + + + D I PP + + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVVGDLIDEGEGV-EFDKKWSIHRDPPPFEEQSTKSEIFETGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKESNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGAEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNR++AE+G YP VDPL S SR+ D + + K+ + ++ ++++ +DI I G Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDPQILGGEHYKVARGVQAVLQKYKDLQDIIAILG 382 >gi|240047755|ref|YP_002961143.1| F0F1 ATP synthase subunit beta [Mycoplasma conjunctivae HRC/581] gi|239985327|emb|CAT05340.1| ATP synthase subunit beta [Mycoplasma conjunctivae] Length = 473 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 110/338 (32%), Positives = 177/338 (52%), Gaps = 16/338 (4%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G+ ++ R+ N LG+PIDG + + L I + P + ++ + TGI+ Sbjct: 80 GQIKVPVGKEVLSRMFNVLGQPIDGGEKT-QFSLKHSIHAAPPSYLEQKTTSEILVTGIK 138 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FI 206 V+D+ P G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 139 VVDLLIPFVKGGKIGLFGGAGVGKTVLVQELINNIATQHGGLSVFAGVGERSREGNDLYF 198 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L K+ +V +ESP R L+A+T+AEYF + +VLL +D+I RF + Sbjct: 199 EMKAAGVLDKTALVFGQMNESPGARMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQA 258 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++T G +P GY ++ +E+ +L ERI + G+IT++ +V V D+ DP Sbjct: 259 GSEVSTLLGRIPSTVGYQPTLATEMGQLQERI--TSTRSGSITSIQAVYVPADDITDPAP 316 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + S LD VL+R++A G YP VDPLAS SR+ + A + V+ + + RF+ Sbjct: 317 ATTFSHLDAKTVLDRNIAALGIYPAVDPLASSSRILEPAVVGQKHYDVARQVIKTLQRFK 376 Query: 385 ETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419 E +DI I GVD + + K V + I +FL Q Sbjct: 377 ELQDIISI----LGVDELAEEDKKIVARARRIRNFLSQ 410 >gi|188587434|ref|YP_001918979.1| ATP synthase F1, beta subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352121|gb|ACB86391.1| ATP synthase F1, beta subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 475 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 162/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N G IDG + +G+ I P +++ + +TGI+V+D+ P Sbjct: 98 STLGRVFNITGDTIDGQGEV-EGEDYYPIHRDSPKFEDQETSTEILETGIKVLDLLVPYA 156 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI-EDYLGDNLK 215 G +IG+F G+G+GK+ L+ R+ ++ + S VGER RE + + E + Sbjct: 157 RGGKIGLFGGAGVGKTVLIQELIRNIAYEHGGFSVFSGVGERTREGNDLVLEMSESGVID 216 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF ++G +VLL +D+I RF + +E++ G Sbjct: 217 KTALVFGQMNEPPGARMRVGLTGLTMAEYFRDNEGQDVLLFIDNIFRFTQAGQEVSALMG 276 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + +KG++T++ ++ V D+ DP + + LD Sbjct: 277 RMPSAVGYQPTLQTEMGELQERI--TSTKKGSVTSIQAIYVPADDPTDPAPATTFAHLDA 334 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 L RS+AE G YP VDPL S SR+ D E V+ + ++ R++E +DI I Sbjct: 335 STYLERSIAEMGIYPAVDPLVSSSRILDPQIVGQEHYDVARGVQQVLQRYKELQDIIAIL 394 Query: 394 G 394 G Sbjct: 395 G 395 >gi|269925185|ref|YP_003321808.1| ATP synthase F1, beta subunit [Thermobaculum terrenum ATCC BAA-798] gi|269788845|gb|ACZ40986.1| ATP synthase F1, beta subunit [Thermobaculum terrenum ATCC BAA-798] Length = 471 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 160/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ + LG+P+D + D I P + + F+TG++VID+ P Sbjct: 89 ATLGRIFDVLGQPVDEKGPV-NADERWPIHRPAPEFEEQSTEAEVFETGLKVIDLIAPFT 147 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G + GVF G+G+GK+ ++ + +S+ VGER RE + E+ L Sbjct: 148 RGGKTGVFGGAGVGKTVIIMELINNVAKQHSGVSVFAGVGERTREGTQLYEEMTESGVLG 207 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 +V+V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 STVLVFGQMNEPPGARLRVGLTGLTMAEYFRDVEGRDVLLFMDNIFRFVQAGSEVSALLG 267 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + ++G IT+V +V V D++ DP + + LD Sbjct: 268 RMPSAVGYQPTLATEMGQLQERI--TSTKRGAITSVQAVYVPADDYTDPAPATTFAHLDA 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 I L RS+AE G YP VDPLAS SR+ D +E ++ + ++ R+++ +DI I Sbjct: 326 TIALERSIAERGIYPAVDPLASTSRILDPRIVGEEHYEVARGVQRVLQRYKDLQDIIAIL 385 Query: 394 G 394 G Sbjct: 386 G 386 >gi|23100430|ref|NP_693897.1| F0F1 ATP synthase subunit beta [Oceanobacillus iheyensis HTE831] gi|81845990|sp|Q8EM83|ATPB_OCEIH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|22778663|dbj|BAC14931.1| H(+)-transporting ATP synthase beta chain [Oceanobacillus iheyensis HTE831] Length = 464 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 163/302 (53%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID D+ L +G I + P N + +TGI+V+D+ P Sbjct: 84 VTLGRVFNVLGEKIDLDEPLEEGVRRDPIHREAPDFENLSTETEILETGIKVVDLLAPYI 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ + Sbjct: 144 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVI 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 203 AKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFVDNIFRFTQAGSEVSALL 262 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 263 GRMPSAVGYQPTLATEMGQLQERI--TSTDKGSVTSIQAIYVPADDYTDPAPATTFAHLD 320 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 L+R L+E+G YP VDPL S SR D E ++ + + + ++ E +DI I Sbjct: 321 ATTNLDRKLSEQGIYPAVDPLESTSRALDPEVVGKEHYEVATEVQQTLQKYRELQDIIAI 380 Query: 393 GG 394 G Sbjct: 381 LG 382 >gi|147679147|ref|YP_001213362.1| F0F1 ATP synthase subunit beta [Pelotomaculum thermopropionicum SI] gi|190358698|sp|A5CYE2|ATPB_PELTS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|146275244|dbj|BAF60993.1| F0F1-type ATP synthase, beta subunit [Pelotomaculum thermopropionicum SI] Length = 470 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 104/313 (33%), Positives = 165/313 (52%), Gaps = 20/313 (6%) Query: 96 SPSAC-----WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 +P C GR+++ LG+PIDG + D I PP + + + +TGI+ Sbjct: 81 APITCPVGRPTLGRLVDVLGQPIDGKGPI-ISDKRYPIHRPAPPLVEQSTKAEQLETGIK 139 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VR 203 VID+ P G +IG+F G+G+GK+ ++ + IS+ VGER RE R Sbjct: 140 VIDLLVPFLKGGKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYR 199 Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 E E + L K+ +V +E P R LT + +AEYF +G + LL +D+I RF Sbjct: 200 EMTEAGV---LDKTTMVFGQMNEPPGARLRVALTGLCLAEYFRDEEGADTLLFIDNIFRF 256 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ ++ ERI + KG++T+V +V V D+ D Sbjct: 257 TQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TSTVKGSVTSVQAVYVPADDLTD 314 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LDG +VL+R +AE G YP VDPL S SR+ D +E + + ++ Sbjct: 315 PAPATTFAHLDGTVVLSRQIAELGIYPAVDPLDSTSRILDPLVVGNEHYQTARGVQKVLQ 374 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 375 RYKELQDIIAILG 387 >gi|210613760|ref|ZP_03289874.1| hypothetical protein CLONEX_02081 [Clostridium nexile DSM 1787] gi|210150969|gb|EEA81977.1| hypothetical protein CLONEX_02081 [Clostridium nexile DSM 1787] Length = 463 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 161/294 (54%), Gaps = 11/294 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PID + D+ E + + P+ Q E + +TGI+V+D+ P G Sbjct: 90 GRIFNVLGEPID--EKPAPTDVEYEPIHRKAPSFEEQATEAEMLETGIKVVDLLCPYQKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + + + VGER RE + + E + K+ Sbjct: 148 GKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTGVGERTREGNDLYYEMQESGVINKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ G + Sbjct: 208 AMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRM 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD + Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDAKV 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 VL+R++ E G YP VDPL S SR+ D +E K+ + ++ +++E +DI Sbjct: 326 VLSRAITELGIYPAVDPLDSSSRMLDPNIVGEEHYKVARGVQEVLQKYKELQDI 379 >gi|118573692|sp|Q38WK5|ATPB_LACSS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 476 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 158/295 (53%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG+ IDG + D + + + P +TGI+VID+ P Sbjct: 87 LGRVFNVLGETIDGGEEF-PADFRRDSIHRSAPKFEELNTSSEILETGIKVIDLLAPYVR 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E L+K Sbjct: 146 GGKIGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLEK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +ESP R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVFGQMNESPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R L ++G YP V+PL S S D E ++ S + H++ R+ E +DI Sbjct: 324 TNLDRKLTQQGIYPAVNPLESSSSALDPEIVGQEHYEVASEVQHVLQRYRELQDI 378 >gi|220932616|ref|YP_002509524.1| ATP synthase F1, beta subunit [Halothermothrix orenii H 168] gi|219993926|gb|ACL70529.1| ATP synthase F1, beta subunit [Halothermothrix orenii H 168] Length = 487 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PID + + + I P ++ + F+TGI+VID+ P G Sbjct: 107 LGRLFNVLGEPIDKQGPVDTEE-KLPIHRPAPSYEEQETTTEVFETGIKVIDLLAPYAKG 165 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + + S VGER RE + ++E D L K Sbjct: 166 GKVGLFGGAGVGKTVLIQELIHNIAIEHGGYSVFSGVGERTREGNDLWLEFQEADILDKV 225 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K G +VLL +D+I RF + E++ G + Sbjct: 226 ALVFGQMNEPPGARMRVGLTGLTMAEYFRDKEGQDVLLFIDNIFRFIQAGSEVSALLGRM 285 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ ++ +L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 286 PSAVGYQPTLAVDVGQLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 343 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE+G YP VDPL S SR+ + +E K+ + ++ ++++ +DI I G Sbjct: 344 VLSRQIAEKGIYPAVDPLDSTSRILEPGVIGEEHYKVARQVQEVLQQYKDLQDIIAILG 402 >gi|81428735|ref|YP_395735.1| F0F1 ATP synthase subunit beta [Lactobacillus sakei subsp. sakei 23K] gi|78610377|emb|CAI55427.1| H(+)-transporting two-sector ATPase (ATP synthase), beta subunit [Lactobacillus sakei subsp. sakei 23K] Length = 483 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 98/295 (33%), Positives = 158/295 (53%), Gaps = 10/295 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG+ IDG + D + + + P +TGI+VID+ P Sbjct: 94 LGRVFNVLGETIDGGEEF-PADFRRDSIHRSAPKFEELNTSSEILETGIKVIDLLAPYVR 152 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E L+K Sbjct: 153 GGKIGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLEK 212 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +ESP R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 213 TAMVFGQMNESPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 272 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 273 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 330 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R L ++G YP V+PL S S D E ++ S + H++ R+ E +DI Sbjct: 331 TNLDRKLTQQGIYPAVNPLESSSSALDPEIVGQEHYEVASEVQHVLQRYRELQDI 385 >gi|170694208|ref|ZP_02885363.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M] gi|170140948|gb|EDT09121.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M] Length = 490 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 161/295 (54%), Gaps = 12/295 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+I+ G+ DG ++L I PP +++ + F TGI+VID+ PL G Sbjct: 101 GRLIDVTGRACDGGEALPSQIERRPIHRAAPPLASQKGTTELFSTGIKVIDLLAPLAQGG 160 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 + +F G+G+GK+ L+ +M R + + + VGER RE E + D L + Sbjct: 161 KAAMFGGAGVGKTVLVMELIHAMVERYEGIS--VFAGVGERSREGHEMLLDMRTSGVLAR 218 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +E P R P TA+TIAEYF + NVLL++D++ R+ + E++ G Sbjct: 219 TVLVYGQMNEPPGARWRVPFTALTIAEYFRDERRQNVLLLMDNVFRYVQAGAEVSGLLGR 278 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P GY ++ SE+ +L ERI +++A+ +V V D+ DP ++ + LD + Sbjct: 279 MPSRVGYQPTLASEVAQLQERI--VSVGGVSVSAIEAVYVPADDFTDPAVTAIAAHLDSN 336 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 +VL+R++A EG YP VDP+AS S L D +E V++ + +I + E +D+ Sbjct: 337 VVLSRAMAAEGMYPAVDPIASSSILLDPLVVGEEHAAVATEVRRVIEHYRELQDV 391 >gi|293399933|ref|ZP_06644079.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291306333|gb|EFE47576.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 466 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 164/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+ IDG LG+ S + I K P +Q + +TGI+VID+ P Sbjct: 89 GRMFNVLGREIDG---LGEVKTSKRLPIHRKAPSFDEQQTSAEMLETGIKVIDLLCPYSK 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + K +++ VGER RE + + L K Sbjct: 146 GGKIGLFGGAGVGKTVLIQELIHNIAKEHGGKSVVTGVGERTREGNDMYHEMKDSGVLDK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +ESP R LT +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 206 TVLVYGQMNESPGARMRVGLTGLTMAEYFRDVEHQDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + + G+IT+V ++ V D+ DP + + LD Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKDGSITSVQAIYVPADDLTDPAPATAFTHLDAK 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +A G YP VDPL S SR+ D +E ++ + ++ R++E +DI I G Sbjct: 324 TVLDRDIAALGIYPAVDPLESSSRILDPLVVGEEHYEVARGVQQILQRYKELQDIIAILG 383 >gi|269114800|ref|YP_003302563.1| ATP synthase subunit beta [Mycoplasma hominis] gi|268322425|emb|CAX37160.1| ATP synthase beta chain [Mycoplasma hominis ATCC 23114] Length = 495 Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 102/297 (34%), Positives = 157/297 (52%), Gaps = 10/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LG+PID + K M I P ++ + F+TGI+VID+ P G + Sbjct: 116 RMFNVLGEPIDQKGGVFKH--KMPIHRAAPSYEEQKSTLEIFETGIKVIDLLVPYIKGGK 173 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVV 219 IG+F G+G+GK+ L+ + +S+ VGER RE + + L+K+ + Sbjct: 174 IGLFGGAGVGKTVLIQELINNIAKQHGGLSVFAGVGERTREGNDLYHEMQASGVLEKTAL 233 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R AP TA+TIAEYF +VLL +D+I RF + E++ G +P Sbjct: 234 VFGQMNEPPGARMRAPFTALTIAEYFRDVMHQDVLLFIDNIFRFTQAGSEVSALLGRMPS 293 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ +L ERI + G+IT+V +V V D+ DP + + LD VL Sbjct: 294 AVGYQPTLAVEMGQLQERI--TSTNNGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 351 Query: 339 NRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +R +A G YP +DPLAS SR+ D + ++ +++ RF+E +DI I G Sbjct: 352 DRDIAALGIYPAIDPLASSSRMVDPNIIGLEHYNTARAVQNILQRFKELQDIIAILG 408 >gi|302390542|ref|YP_003826363.1| ATP synthase F1 subcomplex beta subunit [Thermosediminibacter oceani DSM 16646] gi|302201170|gb|ADL08740.1| ATP synthase F1 subcomplex beta subunit [Thermosediminibacter oceani DSM 16646] Length = 489 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 106/302 (35%), Positives = 164/302 (54%), Gaps = 15/302 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+PID + + I PP ++ E+ F+TGI+V+D+ P G Sbjct: 108 LGRVFNVLGEPIDDIRGVEVRE-RWPIHRPAPPFEEQETGEEIFETGIKVLDLLAPYPRG 166 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN----L 214 +IG+F G+G+GK+ L+ R+ + + + VGER RE E +LG L Sbjct: 167 GKIGLFGGAGVGKTVLIMELIRNIATEHRGYSVFAGVGERTREGNEL---WLGMKASGVL 223 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 +K+V+V +E P R LTA+T+AEYF + G +VLL +D+I R+ + E++ Sbjct: 224 EKTVLVFGQMNEPPGARMRVALTALTMAEYFRDELGQDVLLFIDNIFRYIQAGSEVSALL 283 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ ++ L ERI + +KG IT+V +V V D+ DP + + LD Sbjct: 284 GRIPSAVGYQPTLAVDVGMLQERI--TSTKKGAITSVQAVYVPADDLTDPAPATAFAHLD 341 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 VL+R +AE G YP VDPL S SR+ D ++ V+ + ++ R+ E +DI I Sbjct: 342 ATTVLSRQVAEMGLYPAVDPLDSTSRILDPRIVGEKHYAVAMGVQKILQRYRELQDIIAI 401 Query: 393 GG 394 G Sbjct: 402 LG 403 >gi|313891352|ref|ZP_07824968.1| ATP synthase F1, beta subunit [Dialister microaerophilus UPII 345-E] gi|313120127|gb|EFR43303.1| ATP synthase F1, beta subunit [Dialister microaerophilus UPII 345-E] Length = 477 Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 9/311 (2%) Query: 91 GRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 GR P C GR+ N LG+ +D K I P ++ + F+TGI Sbjct: 84 GRAIAVPVGDGCLGRIFNVLGQTVDNGTEEVKASDYWPIHRAAPAFKDQAPAAEIFETGI 143 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI 206 +V+D+ P G +IG+F G+G+GK+ L+ + + S+ VGER RE + Sbjct: 144 KVVDLIAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHSGCSVFCGVGERTREGNDLW 203 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264 + L K+ +V +E P R LT +T++EYF K G +VLL +D+I RF Sbjct: 204 GEMKESGVLSKAALVYGQMNEPPGARMRVALTGLTMSEYFRDKQGQDVLLFIDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + + G+IT+V +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATDIGELQERI--TSTKDGSITSVQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 V + LD VLNRS+AE G YP VDPL S SR+ D +E ++ + ++ R+ Sbjct: 322 PAGVFTHLDATTVLNRSIAELGIYPAVDPLDSTSRILDPNTLGEEHYEVARGVQAILQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|153811248|ref|ZP_01963916.1| hypothetical protein RUMOBE_01640 [Ruminococcus obeum ATCC 29174] gi|149832746|gb|EDM87830.1| hypothetical protein RUMOBE_01640 [Ruminococcus obeum ATCC 29174] Length = 463 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 164/302 (54%), Gaps = 11/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPL 158 C GR+ N LG+ +DG +SL D ++ + PP+ Q+ + +TGI+VID+ P Sbjct: 83 CTLGRLFNVLGETVDGGESLD--DAEHWVIHRDPPSFEEQKPAVEILETGIKVIDLLAPY 140 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ ++ + I + VGER RE + + L Sbjct: 141 AKGGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVL 200 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R T +T+AEYF ++ +VLL +D+I RF + E++ Sbjct: 201 KKTALVFGQMNEPPGSRMRVAETGLTMAEYFRDTEHRDVLLFIDNIFRFVQAGSEVSALL 260 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + G++T+V +V V D+ DP + + LD Sbjct: 261 GRMPSAVGYQPTLATEMGELQERIASTTS--GSVTSVQAVYVPADDLTDPAPATTFAHLD 318 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 VL+R + E+G YP VDPL S SR+ + +E ++ + ++ +++E +DI I Sbjct: 319 ATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYEVARRVQEILQKYKELQDIIAI 378 Query: 393 GG 394 G Sbjct: 379 LG 380 >gi|332295443|ref|YP_004437366.1| ATP synthase subunit beta [Thermodesulfobium narugense DSM 14796] gi|332178546|gb|AEE14235.1| ATP synthase subunit beta [Thermodesulfobium narugense DSM 14796] Length = 473 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 105/301 (34%), Positives = 165/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG +D + + S + K PP++ + V + +TGI+VID+ P Sbjct: 91 LGRIFNVLGNTVDDGPKVEAKNFSP--LHKAPPSLRDINPVPQQLETGIKVIDLLVPFPR 148 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ +L R+ + K + + VGER RE + + + K Sbjct: 149 GGKIGLFGGAGVGKTVILMELIRNIAAEHGGKSVFAGVGERTREGNDLYHEMKASGVIDK 208 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS--KGDNVLLILDSITRFAHSIREIATNSG 274 +V+V +E P R LT +T+AEYF K D VLL +D+I RF + E++T G Sbjct: 209 TVMVFGQMNELPGARMRVGLTGLTMAEYFRDVDKAD-VLLFIDNIFRFVQAASEVSTLLG 267 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 LP A GY ++ +++ L ERI + G+IT+V +V V D+ DP + + LDG Sbjct: 268 RLPSAVGYQPTLGTDVGSLQERI--VTTKDGSITSVQAVYVPADDLTDPAPATTFAHLDG 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R LAE G YP VDPL S SR+ D +E LV+ + ++ ++++ +DI I Sbjct: 326 TVVLSRPLAELGIYPAVDPLDSTSRILDPRVVGEEHYLVARGVQKVLQKYKDLQDIIAIL 385 Query: 394 G 394 G Sbjct: 386 G 386 >gi|171779638|ref|ZP_02920594.1| hypothetical protein STRINF_01475 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281740|gb|EDT47174.1| hypothetical protein STRINF_01475 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 468 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 105/316 (33%), Positives = 167/316 (52%), Gaps = 11/316 (3%) Query: 87 VFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144 VF GR + GRV N LG ID D+ + D E + K PA + Sbjct: 73 VFDTGRPISVPVGKETLGRVFNVLGDTIDLDEPFAE-DAPRETIHKKAPAFDELSTSSEI 131 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ L+ + + IS+ VGER RE Sbjct: 132 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 191 Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + + E ++K+ +V +E P R LT +TIAEYF +G +VLL +D+I Sbjct: 192 GNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNI 251 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D+ Sbjct: 252 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADD 309 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L R L + G YP VDPLAS SR LA + + ++ + + Sbjct: 310 YTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEHYEVATEVQR 369 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ E +DI I G Sbjct: 370 VLQRYRELQDIIAILG 385 >gi|306833169|ref|ZP_07466299.1| ATP synthase F1 sector beta subunit [Streptococcus bovis ATCC 700338] gi|304424743|gb|EFM27879.1| ATP synthase F1 sector beta subunit [Streptococcus bovis ATCC 700338] Length = 468 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 106/316 (33%), Positives = 168/316 (53%), Gaps = 11/316 (3%) Query: 87 VFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144 VF GR P GRV N LG+ ID D+ + D E + K PA + Sbjct: 73 VFDTGRAISVPVGKETLGRVFNVLGETIDLDEPFAE-DAPREPIHKKAPAFDELSTSSEI 131 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ L+ + + IS+ VGER RE Sbjct: 132 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 191 Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + + E ++K+ +V +E P R LT +TIAEYF +G +VLL +D+I Sbjct: 192 GNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNI 251 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D+ Sbjct: 252 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADD 309 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L R L + G YP VDPLAS SR LA + + ++ + + Sbjct: 310 YTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEHYEVATEVQR 369 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ E +DI I G Sbjct: 370 VLQRYRELQDIIAILG 385 >gi|57504649|ref|ZP_00370727.1| ATP synthase F1, beta subunit [Campylobacter coli RM2228] gi|57019418|gb|EAL56113.1| ATP synthase F1, beta subunit [Campylobacter coli RM2228] Length = 465 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N G ID + + D I + PPA Q + F+TGI+V+D+ P Sbjct: 87 LGRIFNVTGDLIDEGEEI-SFDKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G Sbjct: 205 VALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 265 IPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNRS+AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I G Sbjct: 323 TVLNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382 >gi|162447836|ref|YP_001620968.1| F-type H+-transporting ATPase subunit beta [Acholeplasma laidlawii PG-8A] gi|190358283|sp|A9NGW2|ATPB_ACHLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|161985943|gb|ABX81592.1| F-type H+-transporting ATPase beta chain [Acholeplasma laidlawii PG-8A] Length = 460 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 113/329 (34%), Positives = 170/329 (51%), Gaps = 18/329 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N LGKP+DG D + M I K+PP + E +TGI+VID+ P Sbjct: 84 LGRMLNVLGKPMDGLDEVDT-KRYMPI-HKLPPDFHDLGGETEILETGIKVIDLIAPYIK 141 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE E + L K Sbjct: 142 GGKIGLFGGAGVGKTVLIQEMIHNVAKNHGGISVFTGVGERVREGHELYHEMKDSGVLDK 201 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF + NVLL +D+I R+ + EI+ G Sbjct: 202 TALVFGQMNEPPGARLRVALTGLTLAEYFRDGEKQNVLLFIDNIYRYIQAGSEISALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + G+IT++ +V V D++ DP +V S LD Sbjct: 262 MPSAVGYQPTLATEMGKLQERI--TSTRYGSITSIQAVYVPADDYTDPAPATVFSHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R L E+G YP +DPL S SR L + + ++ R+ E DI I Sbjct: 320 TALSRKLTEDGIYPAIDPLGSTSRALTPSVVGQEHYDTAREVQRMLQRYHELLDIIAI-- 377 Query: 395 YRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D VH+ I +FL Q+ Sbjct: 378 --LGMDELSDDDKLVVHRARRIQNFLSQN 404 >gi|85858477|ref|YP_460679.1| F0F1 ATP synthase subunit beta [Syntrophus aciditrophicus SB] gi|118573766|sp|Q2LR05|ATPB_SYNAS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|85721568|gb|ABC76511.1| ATP synthase beta chain [Syntrophus aciditrophicus SB] Length = 469 Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 164/305 (53%), Gaps = 10/305 (3%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GR++N +GKP+DG + + +M I + P + + +TG++VID+ Sbjct: 84 PVGKECLGRILNVVGKPVDGLGPI-EAKNTMPIHREAPSFLEQDTSVHVLETGVKVIDLL 142 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G GK+ ++ + IS+ VGER RE + + L Sbjct: 143 VPFPRGGKMGLFGGAGCGKTVVMMEMIHNIAMHHGGISVFAGVGERTREGNDLYREMLES 202 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 +K++ ++ E P R LTA+ AEYF +G +VLL +D+I RF + E++ Sbjct: 203 GVIKQAALIYGQMTEPPGARARVSLTALAAAEYFRDVEGQDVLLFVDNIFRFTQAGSEVS 262 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++L L ERI + +KG+ITAV V V D+ DP + + Sbjct: 263 ALLGRMPSAVGYQPTLATDLGELQERI--TSTDKGSITAVQCVYVPADDLTDPAPATTFA 320 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LDG +VL+R +AE G YP VDPL S SR+ D +E K+ ++ + ++++ +DI Sbjct: 321 HLDGTVVLSRPIAELGIYPAVDPLDSTSRILDPIVLGEEHYKVARAVQVTLQKYKDLQDI 380 Query: 390 RLIGG 394 I G Sbjct: 381 IAILG 385 >gi|222053555|ref|YP_002535917.1| ATP synthase F1, beta subunit [Geobacter sp. FRC-32] gi|254808152|sp|B9LZ84|ATPB_GEOSF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|221562844|gb|ACM18816.1| ATP synthase F1, beta subunit [Geobacter sp. FRC-32] Length = 470 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 99/303 (32%), Positives = 167/303 (55%), Gaps = 17/303 (5%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D +G D I + P +++ + F TGI+V+D+ P Sbjct: 92 LGRILNVIGEPVD---EMGPVNADKEYGIHREAPEFVDQSTKVEAFTTGIKVVDLLAPYA 148 Query: 160 HGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDN 213 G +IG+F G+G+GK+ L+ ++ + F + + VGER RE + ++E Sbjct: 149 RGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFS--VFAGVGERTREGNDLWMEMKESGV 206 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 L K+ +V +E P R L+A++IAEYF +G NVLL +D+I RF + E++ Sbjct: 207 LDKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFIDNIFRFTQAGSEVSAL 266 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L ERI + KG+IT+V ++ V D+ DP + + L Sbjct: 267 LGRIPSAVGYQPTLATEMGELQERI--TSTNKGSITSVQAIYVPADDLTDPAPATAFAHL 324 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391 D VL+R +AE G YP VDPL S SR+ D +E ++ + +++ ++++ +DI Sbjct: 325 DATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYAIARQVQYVLQKYKDLQDIIA 384 Query: 392 IGG 394 I G Sbjct: 385 ILG 387 >gi|83716757|ref|YP_438619.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis E264] gi|257141683|ref|ZP_05589945.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis E264] gi|123754000|sp|Q2T880|ATPB2_BURTA RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|83650582|gb|ABC34646.1| ATP synthase F1, beta subunit [Burkholderia thailandensis E264] Length = 512 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 158/307 (51%), Gaps = 12/307 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G+P D +L I PP ++ F TGI+ Sbjct: 97 GPIRVPVGDAVLGRLLSVTGEPGDDGAALAADVARRPIHRGAPPLAEQKSATALFATGIK 156 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205 VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE E Sbjct: 157 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 214 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF Sbjct: 215 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 274 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP Sbjct: 275 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 332 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 333 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 392 Query: 383 FEETRDI 389 + E +D+ Sbjct: 393 YRELQDV 399 >gi|160902211|ref|YP_001567792.1| F0F1 ATP synthase subunit beta [Petrotoga mobilis SJ95] gi|190358699|sp|A9BFX3|ATPB_PETMO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|160359855|gb|ABX31469.1| ATP synthase F1, beta subunit [Petrotoga mobilis SJ95] Length = 467 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 104/303 (34%), Positives = 166/303 (54%), Gaps = 17/303 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR++N LGKPID KGD+ E + + PP++N Q + +TGI+ ID+ P Sbjct: 89 LGRMVNLLGKPIDE-----KGDVEGEEYWPIHRDPPSLNEQDTSIEILETGIKCIDLLAP 143 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213 G +IG F G+G+GK+ L+ R+ + IS+ VGER RE + ++E Sbjct: 144 FPRGGKIGFFGGAGVGKTVLVMELIRNIAKEHQGISVFAGVGERTREGNDLWLEMQETGV 203 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATN 272 + + +V +E P R PLTA+TI+EYF + +VLL +D+I RF + E++ Sbjct: 204 IDSTALVFGQMNEPPGARFRVPLTALTISEYFRDRQKKDVLLFIDNIFRFVQAGSEVSAL 263 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ S++ +L ERI + + G+IT+V ++ V D+ DP + + L Sbjct: 264 LGRMPSAVGYQPTLASDMGQLQERI--TSTKDGSITSVQAIYVPADDFTDPAPATTFAHL 321 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391 D +I L+R +E G YP VDPL S S++ D D + + ++ R+E+ +DI Sbjct: 322 DANINLSRRQSELGLYPAVDPLDSTSKMLDPNVVGQDHYSVAREVKEVLQRYEDLQDIIA 381 Query: 392 IGG 394 I G Sbjct: 382 ILG 384 >gi|305432648|ref|ZP_07401809.1| ATP synthase F1 sector beta subunit [Campylobacter coli JV20] gi|304444359|gb|EFM37011.1| ATP synthase F1 sector beta subunit [Campylobacter coli JV20] Length = 465 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 162/300 (54%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N G ID + + D I + PPA Q + F+TGI+V+D+ P Sbjct: 87 LGRIFNVTGDLIDEGEEVAF-DKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G Sbjct: 205 VALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 265 IPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNRS+AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I G Sbjct: 323 TVLNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382 >gi|319780917|ref|YP_004140393.1| ATP synthase F1 subunit beta [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166805|gb|ADV10343.1| ATP synthase F1, beta subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 477 Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 103/308 (33%), Positives = 161/308 (52%), Gaps = 19/308 (6%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+IN +G+P+D + + + M + + P Q E TGI+V+D+ P Sbjct: 89 MLGRIINVIGEPVDEEGPVDA--IEMRSIHQPAPTYVEQSTEAQILITGIKVLDLLAPYA 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L+ A++ V VGER RE EFIE + Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAG-VGERTREGNDLYHEFIESGVN 205 Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 G K+ +V +E P R LT +T+AEYF +G +VL +D+I RF + Sbjct: 206 KKGGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGS 265 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + Sbjct: 266 EVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPAT 323 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD LNR++AE+G YP VDPL S SR+ D DE V+ + ++ R++ Sbjct: 324 SFAHLDATTTLNRAIAEKGIYPAVDPLDSTSRMLDPLVVGDEHYGVARQVQSILQRYKSL 383 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 384 QDIIAILG 391 >gi|291333876|gb|ADD93557.1| F0F1 ATP synthase subunit beta [uncultured marine bacterium MedDCM-OCT-S04-C293] Length = 459 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 103/313 (32%), Positives = 164/313 (52%), Gaps = 16/313 (5%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQ-RVEKGFK 146 G ++ GR++N LG+PIDG KGD+ E + + PP+ Q + + Sbjct: 72 GAVKVPVGEKTLGRILNVLGEPIDG-----KGDVGAEEQMPIHRAPPSYEDQAESSEILE 126 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVR 203 TGI+VID+ P G ++G+F G+G+GK+ + R+ ++ + + VGER RE Sbjct: 127 TGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAYETSGYSVFAGVGERTREGN 186 Query: 204 EF-IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 +F +E L K +V +E P R L+ +TIAE F +G +VLL +D+I R+ Sbjct: 187 DFYLEMTESQVLDKVALVYGQMNEPPGCRMRVALSGLTIAEKFRDEGKDVLLFVDNIYRY 246 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E ++ G +P A GY ++ E+ L ERI + + G+IT+V ++ V D+ D Sbjct: 247 TLAGVECSSLLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAIYVPADDLTD 304 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD +VL+R +A G YP VDPL S SR D A E + + ++ Sbjct: 305 PSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPAIVGQEHYDVAKGVQQVLQ 364 Query: 382 RFEETRDIRLIGG 394 R+ E +DI I G Sbjct: 365 RYLELKDIIAILG 377 >gi|299537992|ref|ZP_07051278.1| F0F1 ATP synthase subunit beta [Lysinibacillus fusiformis ZC1] gi|298726574|gb|EFI67163.1| F0F1 ATP synthase subunit beta [Lysinibacillus fusiformis ZC1] Length = 471 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 159/299 (53%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID + + I + P N + +TGI+V+D+ P G Sbjct: 90 LGRVFNVLGEVIDLGEEIPADARRDSIHREAPTFENLSTTVEILETGIKVVDLLAPYIKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + F E +K++ Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAQEHSGISVFAGVGERTREGNDLFFEMSDSGVIKQT 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGRM 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + KG++T++ ++ V D++ DP + + LD Sbjct: 270 PSAVGYQPTLATEMGKLQERI--TSTNKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L+E G YP VDPLAS SR L+ + A+ + + + I R+ E +DI I G Sbjct: 328 NLERKLSEMGIYPAVDPLASTSRALSPEIVGAEHYAIATGVQRTIQRYRELQDIIAILG 386 >gi|161723286|ref|NP_757448.2| F0F1 ATP synthase subunit beta [Mycoplasma penetrans HF-2] Length = 489 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 101/303 (33%), Positives = 165/303 (54%), Gaps = 11/303 (3%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 + GR+ N +G+PID K + S + K PP+ + Q + F+TGI+VID+ P Sbjct: 90 SAVLGRMFNVVGEPIDNKPMPEKVEYSP--IHKKPPSFDEQSTKTEIFETGIKVIDLLVP 147 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-GDN 213 G +IG+F G+G+GK+ L+ + I + VGER RE + + + G Sbjct: 148 YVKGGKIGLFGGAGVGKTVLVQELIHNIATGHGGLSIFAGVGERTREGNDLYHEMIDGGV 207 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 + ++ +V +E P R LTA+T+AE+F + +VLL +D+I RF+ + E++ Sbjct: 208 INQTALVFGQMNEPPGARMRVALTALTMAEHFRENNKQDVLLFIDNIFRFSQAGSEVSAL 267 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + L Sbjct: 268 LGRIPSAVGYQPTLAFEMGQLQERI--TSTKSGSITSVQAVYVPADDLTDPAPSTTFAHL 325 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D VL+R +A G YP ++PL S SR+ D + E K+ S+ ++ +FEE +DI Sbjct: 326 DAKTVLDRKIASLGIYPAINPLESSSRMLDPSIVGIEHYKVARSVQTILQKFEELQDIIA 385 Query: 392 IGG 394 I G Sbjct: 386 ILG 388 >gi|71893408|ref|YP_278854.1| F0F1 ATP synthase subunit beta [Mycoplasma hyopneumoniae J] gi|118573700|sp|Q4AAV7|ATPB_MYCHJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71851535|gb|AAZ44143.1| ATP synthase beta chain [Mycoplasma hyopneumoniae J] Length = 471 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 103/297 (34%), Positives = 160/297 (53%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LG+PIDG L + I +K P + ++ + TGI+VID+ P G + Sbjct: 91 RMFNVLGQPIDGGKPL-DSFIKNPIHAKAPTYLEQKATSEILVTGIKVIDLLIPFIKGGK 149 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ + +S+ VGER RE + + E L K+ + Sbjct: 150 IGLFGGAGVGKTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLDKTAL 209 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 210 VFGQMNEPPGARMRVALSALTMAEYFRDYENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 269 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 GY ++ +E+ +L ERI + +G+IT+V +V V D+ DP + S LD VL Sbjct: 270 TVGYQPTLSTEMGQLQERI--TSTIRGSITSVQAVYVPADDITDPAPATTFSHLDAKTVL 327 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPLAS SR + + LV+ + ++ RF+E +DI I G Sbjct: 328 DRGIAALGIYPAVDPLASSSRALEPNIVGKKHYLVAKKVVQILQRFKELQDIIAILG 384 >gi|323342943|ref|ZP_08083174.1| ATP synthase F1 sector beta subunit [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463007|gb|EFY08202.1| ATP synthase F1 sector beta subunit [Erysipelothrix rhusiopathiae ATCC 19414] Length = 465 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 163/299 (54%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PID +G EI + PP ++Q +TGI+VID+ P G Sbjct: 84 LGRMFNVLGEPIDEQAFSTEGVEMHEIHREAPPFKDQQTTNTVLETGIKVIDLLCPYPQG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + +++ VGER RE + + L+ + Sbjct: 144 GKIGLFGGAGVGKTVLMQELIHNIAIEHSGLSVVAGVGERTREGNDLYHEMKDAKVLENT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 V+V +ESP R L+A+T+AE F + +VLL +D+I RF + E++ G + Sbjct: 204 VLVYGQMNESPGARMRVALSALTMAENFRDQNKQDVLLFIDNIFRFTQAGSEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + + G+IT++ ++ V D+ DP A + LD Sbjct: 264 PSAVGYQPTLATEMGQLQERI--TSTKSGSITSIQAIYVPADDLTDPAAAITFTHLDAKT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G YP VDPL S S L++ A+ + + + ++ R+++ +DI I G Sbjct: 322 VLDRNIAALGIYPAVDPLESSSNLLSEDVVGAEHVYVATEVQKILQRYKDLQDIIAILG 380 >gi|218135369|ref|ZP_03464173.1| hypothetical protein BACPEC_03274 [Bacteroides pectinophilus ATCC 43243] gi|217990754|gb|EEC56765.1| hypothetical protein BACPEC_03274 [Bacteroides pectinophilus ATCC 43243] Length = 464 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 160/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+PID + + D + I + P + + +TGI+VID+ P G Sbjct: 90 GRMFNVLGEPID-NKPEPQTDTYLPIHRQAPSFEEQSTQAEVLETGIKVIDLLCPYQKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ R+ + + + VGER RE + + L K+ Sbjct: 149 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYGEMKESGVLSKTT 208 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 209 MVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDVLLFIDNIFRFTQAGSEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD V Sbjct: 269 SAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ E G YP VDPL S SR+ D K + K+ + ++ +++E +DI I G Sbjct: 327 LSRSIVELGIYPAVDPLESTSRMLDPKVVGEEHYKVARQVQEILQKYKELQDIIAILG 384 >gi|163789448|ref|ZP_02183887.1| F0F1 ATP synthase subunit beta [Carnobacterium sp. AT7] gi|159875302|gb|EDP69367.1| F0F1 ATP synthase subunit beta [Carnobacterium sp. AT7] Length = 468 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + + + I P +TGI+VID+ P G Sbjct: 89 LGRMFNVLGETIDQKEPFPEDAKRLPIHRNAPTFDELSSNTAILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +K++ Sbjct: 149 GKIGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMQESGVIKRT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF + G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDEVGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + KG+IT++ ++ V D++ DP +V + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTSKGSITSIQAIYVPADDYTDPAPATVFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S L+ + + K+ + + L+ R+ E +DI I G Sbjct: 327 NLERKLTEQGIYPAVDPLASTSSALSPEIVGEEHYKVATEVQQLLQRYRELQDIIAILG 385 >gi|72080395|ref|YP_287453.1| F0F1 ATP synthase subunit beta [Mycoplasma hyopneumoniae 7448] gi|118573699|sp|Q4A8V9|ATPB_MYCH7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71913519|gb|AAZ53430.1| ATP synthase beta chain [Mycoplasma hyopneumoniae 7448] Length = 471 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 103/297 (34%), Positives = 160/297 (53%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LG+PIDG L + I +K P + ++ + TGI+VID+ P G + Sbjct: 91 RMFNVLGQPIDGGKPL-DSFIKNPIHAKAPTYLEQKATSEILVTGIKVIDLLIPFIKGGK 149 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ + +S+ VGER RE + + E L K+ + Sbjct: 150 IGLFGGAGVGKTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLDKTAL 209 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 210 VFGQMNEPPGARMRVALSALTMAEYFRDYENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 269 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 GY ++ +E+ +L ERI + +G+IT+V +V V D+ DP + S LD VL Sbjct: 270 TVGYQPTLSTEMGQLQERI--TSTIRGSITSVQAVYVPADDITDPAPATTFSHLDAKTVL 327 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPLAS SR + + LV+ + ++ RF+E +DI I G Sbjct: 328 DRGIAALGIYPAVDPLASSSRALEPNIVGKKHYLVAKKVVQILQRFKELQDIIAILG 384 >gi|13473456|ref|NP_105023.1| F0F1 ATP synthase subunit beta [Mesorhizobium loti MAFF303099] gi|81855462|sp|Q98EV8|ATPB_RHILO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|14024205|dbj|BAB50809.1| ATP synthase beta subunit [Mesorhizobium loti MAFF303099] Length = 477 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 161/308 (52%), Gaps = 19/308 (6%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+IN +G+P+D + + + M + + P Q E TGI+V+D+ P Sbjct: 89 MLGRIINVIGEPVDEEGPVDA--IEMRSIHQPAPTYVEQSTEAQILITGIKVLDLLAPYA 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L+ A++ V VGER RE EFIE + Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAG-VGERTREGNDLYHEFIESGVN 205 Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 G K+ +V +E P R LT +T+AEYF +G +VL +D+I RF + Sbjct: 206 KKGGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGS 265 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + Sbjct: 266 EVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPAT 323 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD LNR++AE+G YP VDPL S SR+ D +E V+ + ++ R++ Sbjct: 324 SFAHLDATTTLNRAIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYAVARQVQSILQRYKSL 383 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 384 QDIIAILG 391 >gi|312601020|gb|ADQ90275.1| ATP synthase subunit beta [Mycoplasma hyopneumoniae 168] Length = 471 Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 103/297 (34%), Positives = 160/297 (53%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LG+PIDG L + I +K P + ++ + TGI+VID+ P G + Sbjct: 91 RMFNVLGQPIDGGKPL-DSFIKNPIHAKAPTYLEQKATSEILVTGIKVIDLLIPFIKGGK 149 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ + +S+ VGER RE + + E L K+ + Sbjct: 150 IGLFGGAGVGKTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLDKTAL 209 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 210 VFGQMNEPPGARMRVALSALTMAEYFRDYENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 269 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 GY ++ +E+ +L ERI + +G+IT+V +V V D+ DP + S LD VL Sbjct: 270 TVGYQPTLSTEMGQLQERI--TSTIRGSITSVQAVYVPADDITDPAPATTFSHLDAKTVL 327 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPLAS SR + + LV+ + ++ RF+E +DI I G Sbjct: 328 DRGIAALGIYPAVDPLASSSRALEPNIVGKKHYLVAKKVVQILQRFKELQDIIAILG 384 >gi|110004066|emb|CAK98405.1| atp synthase beta chain protein [Spiroplasma citri] Length = 465 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 110/328 (33%), Positives = 172/328 (52%), Gaps = 16/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + K L I + P +Q +TGI+V+D+ P G Sbjct: 86 LGRMFNVLGEAID-EKPQPKTKLMRPIHREAPSYEEQQTTAAILETGIKVVDLLVPFAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + E + K+ Sbjct: 145 GKIGLFGGAGVGKTVLVQELINNVAKAHGGISVFAGVGERTREGNDLYYEMIEAGVIDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E+P R LT +TIAEYF K +VLL +D+I RF + E++ G + Sbjct: 205 ALVFGQMNETPGARMRVALTGLTIAEYFRDDKNQDVLLFIDNIFRFTQAGSEVSALLGRM 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + LD + Sbjct: 265 PSAVGYQPTLATEMGALQERI--TSTKKGSITSIQAVYVPSDDLTDPAPATTFAHLDAKV 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R +A G YP VDPL S SRL D +E ++ + ++ +F+E + I I Sbjct: 323 VLDREIAALGIYPAVDPLGSSSRLLDPLVVGEEHYEVARGVQEILQKFKELQSIIAI--- 379 Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ AV + I +FL QS Sbjct: 380 -LGMDELSDEDKLAVARARKIRNFLSQS 406 >gi|15896119|ref|NP_349468.1| F0F1 ATP synthase subunit beta [Clostridium acetobutylicum ATCC 824] gi|20137589|sp|Q9Z687|ATPB_CLOAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|15025911|gb|AAK80808.1|AE007784_5 FoF1-type ATP synthase beta subunit [Clostridium acetobutylicum ATCC 824] gi|4323568|gb|AAD16426.1| ATP synthase subunit beta [Clostridium acetobutylicum ATCC 824] gi|325510273|gb|ADZ21909.1| F0F1 ATP synthase subunit beta [Clostridium acetobutylicum EA 2018] Length = 466 Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 101/302 (33%), Positives = 165/302 (54%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR+ N LG+ ID GD++ + + + P Q V+ + F+TGI+VID+ P Sbjct: 88 LGRLFNVLGQTIDE-----AGDMNADKYYPIHRPAPTFEEQSVQPEMFETGIKVIDLLAP 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E Sbjct: 143 YQKGGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKDSGV 202 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 + K+ +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ Sbjct: 203 INKTALVFGQMNEPPGARMRVALTGLTMAEYFRDKGQDVLLFIDNIFRFTQAGSEVSALL 262 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 263 GRIPSAVGYQPTLANEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFTHLD 320 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 VL+R ++ G YP V PL S SR+ D +E ++ + + H++ R++E +DI I Sbjct: 321 ATTVLSREISNLGIYPAVSPLESTSRILDPRIVGEEHYEVANKVKHILERYQELQDIIAI 380 Query: 393 GG 394 G Sbjct: 381 LG 382 >gi|290580103|ref|YP_003484495.1| FoF1 membrane-bound proton-translocating ATPase subunit beta [Streptococcus mutans NN2025] gi|4239652|gb|AAD13383.1| ATPase, beta subunit [Streptococcus mutans] gi|254997002|dbj|BAH87603.1| FoF1 membrane-bound proton-translocating ATPase beta subunit [Streptococcus mutans NN2025] Length = 468 Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 9/315 (2%) Query: 87 VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145 VF GR P GRV N LG ID D + I K P + + Sbjct: 73 VFDTGRAISVPVGKETLGRVFNVLGDTIDLDKPFAEDAERQPIHKKAPSFDDLSTSTEIL 132 Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREV 202 +TGI+VID+ P G ++G+F G+G+GK+ L+ + + IS+ VGER RE Sbjct: 133 ETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREG 192 Query: 203 RE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 + + E ++K+ +V +E P R LT +TIAEYF +G +VLL +D+I Sbjct: 193 NDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIF 252 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ Sbjct: 253 RFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDY 310 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379 DP + + LD L R L + G YP VDPLAS SR L+ + + + + + H+ Sbjct: 311 TDPAPATAFAHLDSTTNLERRLTQMGIYPAVDPLASSSRALSPEIVGQEHYDVATEVQHV 370 Query: 380 IHRFEETRDIRLIGG 394 + R+ E +DI I G Sbjct: 371 LQRYRELQDIIAILG 385 >gi|24379917|ref|NP_721872.1| F0F1 ATP synthase subunit beta [Streptococcus mutans UA159] gi|26006949|sp|P95789|ATPB_STRMU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|24377897|gb|AAN59178.1|AE014985_2 FoF1 membrane-bound proton-translocating ATPase, beta subunit [Streptococcus mutans UA159] Length = 468 Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 9/315 (2%) Query: 87 VFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145 VF GR P GRV N LG ID D + I K P + + Sbjct: 73 VFDTGRAISVPVGKETLGRVFNVLGDTIDLDKPFAEDAERQPIHKKAPSFDDLSTSTEIL 132 Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREV 202 +TGI+VID+ P G ++G+F G+G+GK+ L+ + + IS+ VGER RE Sbjct: 133 ETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREG 192 Query: 203 RE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 + + E ++K+ +V +E P R LT +TIAEYF +G +VLL +D+I Sbjct: 193 NDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIF 252 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ Sbjct: 253 RFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDY 310 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379 DP + + LD L R L + G YP VDPLAS SR L+ + + + + + H+ Sbjct: 311 TDPAPATAFAHLDSTTNLERRLTQMGIYPAVDPLASSSRALSPEIVGQEHYDVATEVQHV 370 Query: 380 IHRFEETRDIRLIGG 394 + R+ E +DI I G Sbjct: 371 LQRYRELQDIIAILG 385 >gi|268679156|ref|YP_003303587.1| ATP synthase F1 subunit beta [Sulfurospirillum deleyianum DSM 6946] gi|268617187|gb|ACZ11552.1| ATP synthase F1, beta subunit [Sulfurospirillum deleyianum DSM 6946] Length = 465 Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 101/301 (33%), Positives = 163/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N +G ID G+ GK S+ + PP Q + F+TGI+V+D+ P Sbjct: 87 LGRIFNVVGDVIDQGEPVAGKTKWSIH---REPPKFEEQSTKSEIFETGIKVVDLLAPYA 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ ++ + F + + VGER RE + + N L Sbjct: 144 KGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYHEMKDSNVLD 203 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K + E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G Sbjct: 204 KVALCYGQMSEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGAEMSALLG 263 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 264 RIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDA 321 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VLNRS+AE+G YP VDPL S SR+ + + A+ + + ++ ++++ +DI I Sbjct: 322 TTVLNRSIAEKGIYPAVDPLDSSSRMLNPEILGAEHYNVSRGVQAVLQKYKDLQDIIAIL 381 Query: 394 G 394 G Sbjct: 382 G 382 >gi|167615114|ref|ZP_02383749.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis Bt4] Length = 428 Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 158/307 (51%), Gaps = 12/307 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G+P D +L I PP ++ F TGI+ Sbjct: 13 GPIRVPVGDAVLGRLLSVTGEPGDDGAALAADVARRPIHRGAPPLAEQKSATALFATGIK 72 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205 VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE E Sbjct: 73 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 130 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF Sbjct: 131 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 190 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP Sbjct: 191 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 248 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 249 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 308 Query: 383 FEETRDI 389 + E +D+ Sbjct: 309 YRELQDV 315 >gi|309775243|ref|ZP_07670253.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium 3_1_53] gi|308916995|gb|EFP62725.1| ATP synthase F1, beta subunit [Erysipelotrichaceae bacterium 3_1_53] Length = 466 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 164/308 (53%), Gaps = 9/308 (2%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ GR+ N LG+ IDG +G D ++ I + P +Q + +TGI+VI Sbjct: 79 IRVPVGKEILGRMFNVLGREIDGLGPVGT-DNTLPIHRQAPGFEEQQTSAEMLETGIKVI 137 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ + + +++ VGER RE + + Sbjct: 138 DLLCPYSKGGKIGLFGGAGVGKTVLIQELIHNIAKEHGGMSVVTGVGERTREGNDMYHEM 197 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIR 267 L K+V+V +ESP R LT +T+AEYF +VLL +D+I RF + Sbjct: 198 KDSGVLDKTVLVYGQMNESPGARMRVGLTGLTMAEYFRDHDHQDVLLFIDNIFRFTQAGS 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ +L ERI + + G+IT+V ++ V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKDGSITSVQAIYVPADDLTDPAPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R +A G YP VDPL S SR+ D +E ++ + ++ R++E Sbjct: 316 AFTHLDAKTVLDRDIAALGIYPAVDPLESSSRILDPLVVGEEHYEVARGVQTILQRYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 QDIIAILG 383 >gi|320546479|ref|ZP_08040794.1| ATP synthase F1 sector beta subunit [Streptococcus equinus ATCC 9812] gi|320448864|gb|EFW89592.1| ATP synthase F1 sector beta subunit [Streptococcus equinus ATCC 9812] Length = 468 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 105/316 (33%), Positives = 167/316 (52%), Gaps = 11/316 (3%) Query: 87 VFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144 VF GR + GRV N LG ID D+ + D E + K PA + Sbjct: 73 VFDTGRPISVPVGKETLGRVFNVLGDTIDLDEPFAE-DAPRESIHKKAPAFDELSTSSEI 131 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ L+ + + IS+ VGER RE Sbjct: 132 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 191 Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + + E ++K+ +V +E P R LT +TIAEYF +G +VLL +D+I Sbjct: 192 GNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNI 251 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D+ Sbjct: 252 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADD 309 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L R L + G YP VDPLAS SR LA + + ++ + + Sbjct: 310 YTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEHYEVATEVQR 369 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ E +DI I G Sbjct: 370 VLQRYRELQDIIAILG 385 >gi|288904998|ref|YP_003430220.1| F0F1 ATP synthase beta chain [Streptococcus gallolyticus UCN34] gi|306831069|ref|ZP_07464230.1| ATP synthase F1 sector beta subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977965|ref|YP_004287681.1| F0F1 ATP synthase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731724|emb|CBI13285.1| F0F1 ATP synthase beta chain [Streptococcus gallolyticus UCN34] gi|304426635|gb|EFM29746.1| ATP synthase F1 sector beta subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177893|emb|CBZ47937.1| F0F1 ATP synthase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 468 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 106/316 (33%), Positives = 167/316 (52%), Gaps = 11/316 (3%) Query: 87 VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144 VF GR P GRV N LG ID D+ + D E + K PA + Sbjct: 73 VFDTGRAISVPVGKETLGRVFNVLGDTIDLDEPFAE-DAPREPIHKKAPAFDELSTSSEI 131 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ L+ + + IS+ VGER RE Sbjct: 132 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 191 Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + + E ++K+ +V +E P R LT +TIAEYF +G +VLL +D+I Sbjct: 192 GNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNI 251 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D+ Sbjct: 252 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADD 309 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L R L + G YP VDPLAS SR LA + + ++ + + Sbjct: 310 YTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEHYEVATEVQR 369 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ E +DI I G Sbjct: 370 VLQRYRELQDIIAILG 385 >gi|322379226|ref|ZP_08053617.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS1] gi|322379701|ref|ZP_08054014.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS5] gi|321147850|gb|EFX42437.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS5] gi|321148366|gb|EFX42875.1| F0F1 ATP synthase subunit beta [Helicobacter suis HS1] Length = 474 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G ID + L K + I P + + F+TGI+VID+ P G Sbjct: 87 LGRIFNVVGDVIDNQEPL-KEPIKWPIHRAAPSFEQQSTKTEMFETGIKVIDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + E G L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKEGGVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R T +T+AEYF KG ++L+ +D+I R+A S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIVFTGLTMAEYFRDEKGLDILMFIDNIFRYAQSGAEMSALLGRV 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ +L ERI + + G+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLASEMGKLQERI--TSTKNGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SR+ D +E ++ + ++ ++++ +DI I G Sbjct: 324 VLNRKIAEKGIYPAVDPLDSTSRILDAQVIGNEHYRIATGTQQILQKYKDLQDIIAILG 382 >gi|329121453|ref|ZP_08250077.1| ATP synthase F1 sector beta subunit [Dialister micraerophilus DSM 19965] gi|327469368|gb|EGF14838.1| ATP synthase F1 sector beta subunit [Dialister micraerophilus DSM 19965] Length = 477 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 161/311 (51%), Gaps = 9/311 (2%) Query: 91 GRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 GR P C GR+ N LG+ +D K I P ++ + F+TGI Sbjct: 84 GRAIAVPVGDGCLGRIFNVLGQTVDNGTEEVKASDYWPIHRVAPAFKDQAPAAEIFETGI 143 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI 206 +V+D+ P G +IG+F G+G+GK+ L+ + + S+ VGER RE + Sbjct: 144 KVVDLIAPYAKGGKIGLFGGAGVGKTVLIQELIHNVATEHSGCSVFCGVGERTREGNDLW 203 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264 + L K+ +V +E P R LT +T++EYF K G +VLL +D+I RF Sbjct: 204 GEMKESGVLSKAALVYGQMNEPPGARMRVALTGLTMSEYFRDKQGQDVLLFIDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + + G+IT+V +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLATDIGELQERI--TSTKDGSITSVQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 V + LD VLNRS+AE G YP VDPL S SR+ D +E ++ + ++ R+ Sbjct: 322 PAGVFTHLDATTVLNRSIAELGIYPAVDPLDSTSRILDPNTLGEEHYEVARGVQAILQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|258517234|ref|YP_003193456.1| F0F1 ATP synthase subunit beta [Desulfotomaculum acetoxidans DSM 771] gi|257780939|gb|ACV64833.1| ATP synthase F1, beta subunit [Desulfotomaculum acetoxidans DSM 771] Length = 474 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++ LG+PIDG + D + I P +++ + +TGI+VID+ TP G Sbjct: 94 LGRMMGVLGQPIDGKGPI-VSDEYLPIHRPAPKLVDQSTRAEMLETGIKVIDLMTPFLKG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ ++ + IS+ VGER RE + + L L K+ Sbjct: 153 GKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFSGVGERTREGNDLYHEMLESGVLDKT 212 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 ++V +E P R LT +T+AE F ++G +VLL +D+I RF + E++ G + Sbjct: 213 ILVFGQMNEPPGARLRVGLTGLTMAECFRDNEGADVLLFVDNIFRFTQAGSEVSALLGRM 272 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + KG++T+V ++ V D+ DP + + LD + Sbjct: 273 PSAVGYQPTLATEMGQLQERI--TSTTKGSVTSVQAIYVPADDLTDPAPANAFAHLDATV 330 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D A+ + ++ R++E +DI I G Sbjct: 331 VLSRQIAELGIYPAVDPLDSTSRILDPNVLGAEHYNCSRGVQAVLQRYKELQDIIAILG 389 >gi|315639292|ref|ZP_07894454.1| ATP synthase F1 sector beta subunit [Campylobacter upsaliensis JV21] gi|315480618|gb|EFU71260.1| ATP synthase F1 sector beta subunit [Campylobacter upsaliensis JV21] Length = 465 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 106/317 (33%), Positives = 168/317 (52%), Gaps = 27/317 (8%) Query: 103 GRVINALGKPID---GDDSLGK-----GDLSME----------IMSKVPPAMNRQRVEKG 144 G + ALG PI G+ LG+ GDL E + + PPA Q + Sbjct: 68 GLKVEALGSPISVPVGEKVLGRIFNVTGDLIDEGEEISFDKHWSIHRDPPAFEEQSTKSE 127 Query: 145 -FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGR 200 F+TGI+V+D+ P G ++G+F G+G+GK+ ++ + F + + VGER R Sbjct: 128 IFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTR 187 Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258 E + + N L K + +E P R LT +T+AEYF + G +VL+ +D+ Sbjct: 188 EGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDN 247 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF+ S E++ G +P A GY ++ SE+ + ERI + +KG+IT+V +V V D Sbjct: 248 IFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPAD 305 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377 + DP +V + LD VLNR++AE+G YP VDPL S SR+ D +E K+ + Sbjct: 306 DLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQ 365 Query: 378 HLIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 366 SVLQKYKDLQDIIAILG 382 >gi|313678541|ref|YP_004056281.1| ATP synthase F1 subunit beta [Mycoplasma bovis PG45] gi|312950454|gb|ADR25049.1| ATP synthase F1, beta subunit [Mycoplasma bovis PG45] Length = 487 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 158/299 (52%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ + LG PID + M I + P + + F+TGI+VID+ P G Sbjct: 99 LGRMFDVLGNPIDLKPM--PDTIKMPIHAPAPSYEEQSTESEIFETGIKVIDLLVPYVKG 156 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + +S+ VGER RE + + L L+K+ Sbjct: 157 GKIGLFGGAGVGKTVLVQELINNIAREHGGLSVFAGVGERTREGNDLYNEMLASGVLEKT 216 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 217 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKEKQDVLLFIDNIFRFTQAGSEVSALLGRM 276 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + K G+IT+V +V V D+ DP + + LD Sbjct: 277 PSAVGYQPTLATEMGQLQERIASTNK--GSITSVQAVYVPADDLTDPAPATTFNHLDAKT 334 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G YP VDPL S SRL D E + + ++ RF+E +DI I G Sbjct: 335 VLDRNIAALGIYPAVDPLESSSRLLDPLVIGQEHYETARRVVSILQRFKELQDIIAILG 393 >gi|39995224|ref|NP_951175.1| F0F1 ATP synthase subunit beta [Geobacter sulfurreducens PCA] gi|81832140|sp|Q74GY0|ATPB_GEOSL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|39981986|gb|AAR33448.1| ATP synthase F1, beta subunit [Geobacter sulfurreducens PCA] gi|298504228|gb|ADI82951.1| ATP synthase F1, beta subunit [Geobacter sulfurreducens KN400] Length = 470 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 99/303 (32%), Positives = 167/303 (55%), Gaps = 17/303 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D +G + E I + P +++ + F TGI+V+D+ P Sbjct: 92 LGRILNVIGEPVD---EMGPVNAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYA 148 Query: 160 HGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDN 213 G +IG+F G+G+GK+ L+ ++ + F + + VGER RE + ++E Sbjct: 149 RGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFS--VFAGVGERTREGNDLWMEMKESGV 206 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 L K+ +V +E P R L+A++IAEYF +G NVLL +D+I RF + E++ Sbjct: 207 LDKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFVDNIFRFTQAGSEVSAL 266 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L ERI + KG+IT+V ++ V D+ DP + + L Sbjct: 267 LGRIPSAVGYQPTLATEMGELQERI--TSTTKGSITSVQAIYVPADDLTDPAPATAFAHL 324 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D VL+R +AE G YP VDPL S SR+ D +E + + +++ ++++ +DI Sbjct: 325 DATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYSIARQVQYVLQKYKDLQDIIA 384 Query: 392 IGG 394 I G Sbjct: 385 ILG 387 >gi|317486591|ref|ZP_07945412.1| ATP synthase F1 [Bilophila wadsworthia 3_1_6] gi|316922191|gb|EFV43456.1| ATP synthase F1 [Bilophila wadsworthia 3_1_6] Length = 470 Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 108/336 (32%), Positives = 178/336 (52%), Gaps = 14/336 (4%) Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLG--KGDL 124 D+V + E + G V G+ ++P + GR++N +G+P+D +G K + Sbjct: 56 DVVRTIAMDATEGLVRGMDVVDTGKPIMAPVGSASLGRIMNVVGRPVD---EMGPIKAEK 112 Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 + I + P + + + +TGI+V+D+ P G ++G+F G+G+GK+ +L + Sbjct: 113 YLPIHREAPSFVEQNTSVELLETGIKVVDLLVPFPKGGKMGLFGGAGVGKTVILMEMINN 172 Query: 185 DCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240 IS+ VGER RE + + L+K+ +V +E P R LTA+T Sbjct: 173 IAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEKAALVYGQMNEPPGARARVALTALT 232 Query: 241 IAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 AEYF + +VLL +D+I RF + E++ G +P A GY ++ ++L L ERI Sbjct: 233 CAEYFRDEENQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLGTDLGSLQERI-- 290 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + KG+IT+V +V V D+ DP + S LDG +VL+R +AE G YP VDPL S SR Sbjct: 291 TSTNKGSITSVQAVYVPADDLTDPAPATTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSR 350 Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + D +E V+ + ++ +++E +DI I G Sbjct: 351 ILDPNVVGEEHYGVARGVQQVLQKYKELQDIIAILG 386 >gi|78777600|ref|YP_393915.1| F0F1 ATP synthase subunit beta [Sulfurimonas denitrificans DSM 1251] gi|118573775|sp|Q30QQ1|ATPB_SULDN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|78498140|gb|ABB44680.1| ATP synthase F1, beta subunit [Sulfurimonas denitrificans DSM 1251] Length = 468 Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N +G+ ID + + D M + + PPA+ Q + F+TGI+V+D+ P Sbjct: 91 LGRIFNVIGETIDDGEQVT--DAPMWSIHRQPPALVEQSTTTEMFETGIKVVDLLAPYSK 148 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ ++ + +S+ VGER RE + + N L K Sbjct: 149 GGKVGLFGGAGVGKTVIIMELIHNVAMGHDGLSVFAGVGERTREGNDLYHEMKDSNVLDK 208 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + E P R LT +T+AEYF KG +VL+ +D+I RFA S E++ G Sbjct: 209 VALCYGQMSEPPGARNRIALTGLTMAEYFRDEKGLDVLMFVDNIFRFAQSGSEMSALLGR 268 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L +RI + + G+IT+V +V V D+ DP SV + LD Sbjct: 269 IPSAVGYQPTLAREMGALQDRI--TSTKNGSITSVQAVYVPADDLTDPAPASVFAHLDAT 326 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SRL D +E V+ + + ++++ +DI I G Sbjct: 327 TVLNRKIAEKGIYPAVDPLDSSSRLLDPQILGEEHYNVARGVQQTLQKYKDLQDIIAILG 386 >gi|14715606|gb|AAK72443.1|AF283808_8 ATP synthase beta subunit [Clostridium pasteurianum] Length = 465 Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 108/299 (36%), Positives = 162/299 (54%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GR+ N LGK ID L K D I ++PP+ Q V + F+TGI+VID+ P Sbjct: 87 LGRLFNVLGKTIDEAGDL-KDDEYYPI-HRLPPSFEEQSVVPEMFETGIKVIDLLAPYQK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E + K Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKEHGGLSVFTGVGERTREGNDLYYEMKESGVIDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +V +E P R LT +T+AE F +G +VLL +D+I RF + E++ G + Sbjct: 205 TALVFGQMNEPPGARMRVALTGLTMAEKFRDEGQDVLLFIDNIFRFTQAGSEVSALLGRI 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 265 PSAVGYQPTLATEMGALQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFTHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDIRLIGG 394 VL+RS++E G YP V PL S SR+ D +E V+S LI R+ E +DI I G Sbjct: 323 VLSRSISELGIYPAVSPLESSSRILDPNIVGEEHYQVASKVKLILERYNELQDIIAILG 381 >gi|268609605|ref|ZP_06143332.1| F0F1 ATP synthase subunit beta [Ruminococcus flavefaciens FD-1] Length = 463 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 108/323 (33%), Positives = 169/323 (52%), Gaps = 10/323 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+PID +G D EI K P ++ V + +TGI+VID+ P G Sbjct: 86 GRMFNVLGEPIDKQGDVGT-DERWEIHRKAPTFQDQSPVVEVLETGIKVIDLIAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ R+ + I + VGER RE + + + K+ Sbjct: 145 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWNEMQESGVIAKTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF + +VLL +D+I R+ + E++ G +P Sbjct: 205 LVFGQMNEPPGSRMRVAQTGLTMAEYFRDCEHKDVLLFIDNIFRYVQAGSEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + LD V Sbjct: 265 SAVGYQPTLATEVGELQERI--TSTKNGSITSVQAVYVPADDLTDPAPAITFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGGYR 396 L+R + E+G YP VDPL S SR+ + +E V+ T L+ +++E +DI I G Sbjct: 323 LSRKIVEQGIYPAVDPLESNSRILEPEIVGEEHYNVARRTQELLQKYKELQDIIAILGME 382 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 +D AV++ I FL Q Sbjct: 383 E-LDEEDKLAVYRARKIQKFLSQ 404 >gi|158430153|pdb|2QE7|D Chain D, Crystal Structure Of The F1-Atpase From The Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1 gi|158430154|pdb|2QE7|E Chain E, Crystal Structure Of The F1-Atpase From The Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1 gi|158430155|pdb|2QE7|F Chain F, Crystal Structure Of The F1-Atpase From The Thermoalkaliphilic Bacterium Bacillus Sp. Ta2.A1 gi|33329387|gb|AAQ10090.1| ATP synthase subunit beta [Bacillus sp. TA2.A1] Length = 462 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 162/305 (53%), Gaps = 17/305 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GRV N LG+PID +G+++ E I P ++ +TGI+VID+ Sbjct: 84 ATLGRVFNVLGEPIDE-----QGEVNAEERHPIHRPAPEFEELSTADEILETGIKVIDLL 138 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + Sbjct: 139 APYAKGGKIGLFGGAGVGKTVLIQELINNVAQEHGGLSVFAGVGERTREGNDLYHEMKDS 198 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270 + K+ +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ Sbjct: 199 GVISKTSMVFGQMNEPPGARLRVALTGLTMAEYFRDREGQDVLLFIDNIFRFTQAGSEVS 258 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ +L ERI + +KG+IT++ ++ V D++ DP + + Sbjct: 259 ALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATTFA 316 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD L R LAE G YP VDPLAS SR+ A +E ++ + ++ R+ + +DI Sbjct: 317 HLDATTNLERKLAEMGIYPAVDPLASTSRILSPAVVGEEHYRVARGVQQVLQRYNDLQDI 376 Query: 390 RLIGG 394 I G Sbjct: 377 IAILG 381 >gi|224372373|ref|YP_002606745.1| F0F1 ATP synthase subunit beta [Nautilia profundicola AmH] gi|254808159|sp|B9L7Y7|ATPB_NAUPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|223588441|gb|ACM92177.1| ATP synthase F1, beta subunit [Nautilia profundicola AmH] Length = 468 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 158/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N G IDG + + I PP + + F+TGI+V+D+ P G Sbjct: 88 GRIFNVTGDVIDGGEEVPADTPRWSIHRDAPPFEEQSTKMEVFETGIKVVDLLCPYMKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 + G+F G+G+GK+ ++ + + + + VGER RE + + L K Sbjct: 148 KTGLFGGAGVGKTVIIMELIHNVAYKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKVA 207 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 + +E P R +T +T+AEYF +G +VL+ +D+I RFA + E++ G +P Sbjct: 208 LCYGQMNEPPGCRNRVAMTGLTMAEYFRDEEGRDVLMFIDNIFRFAQAGAEMSALLGRIP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ +L ERI + +KG+IT++ +V V D+ DP SV + LD V Sbjct: 268 SAVGYQPTLATEMGKLQERI--TSTKKGSITSIQAVYVPADDLTDPAPASVFAHLDSTTV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 LNR +AE+G YP VDPL S SR+ D +E ++ + ++ ++++ +DI I G Sbjct: 326 LNRKIAEKGIYPAVDPLDSTSRILDPQIVGEEHYRVARGVQEVLQKYKDLQDIIAILG 383 >gi|310659420|ref|YP_003937141.1| f1 sector of membrane-bound ATP synthase subunit beta [Clostridium sticklandii DSM 519] gi|308826198|emb|CBH22236.1| F1 sector of membrane-bound ATP synthase, beta subunit [Clostridium sticklandii] Length = 465 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + +G G+ + I + P +++ + +TGI+V+D+ P G Sbjct: 88 LGRIFNLLGEPVDNMEYVGTGN-RLPIHREAPAYEDQETSTEILETGIKVVDLIAPYAKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + E+ + K+ Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNIAKEHGGISVFTGVGERTREGNDLYEEMKESGVIDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 V+V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 VLVYGQMNEPPGARMRVGLSGLTMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G YP VDPL S SR L+ + + + ++ R++E +DI I G Sbjct: 325 VLSRNIASLGIYPAVDPLDSTSRILSADIVGKEHYDVARDVQSILQRYKELQDIIAILG 383 >gi|229542495|ref|ZP_04431555.1| ATP synthase F1, beta subunit [Bacillus coagulans 36D1] gi|229326915|gb|EEN92590.1| ATP synthase F1, beta subunit [Bacillus coagulans 36D1] Length = 473 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 101/302 (33%), Positives = 163/302 (53%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+ ID D L KG++ + + K P+ + + + +TGI+V+D+ P Sbjct: 90 ATLGRVFNVLGEVIDLDGEL-KGNVRRDPIQKPAPSFEQLSTQVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNVAQEHGGISVFAGVGERTREGNDLYYEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 209 AKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + KG+IT++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L+E G YP VDPLAS SR L+ + + + + + R+ E +DI I Sbjct: 327 ATTNLERRLSEMGIYPAVDPLASTSRALSPEIVGEEHYNVARQVQQTLQRYRELQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|42784475|ref|NP_981722.1| F0F1 ATP synthase subunit beta [Bacillus cereus ATCC 10987] gi|206976897|ref|ZP_03237799.1| ATP synthase F1, beta subunit [Bacillus cereus H3081.97] gi|217962793|ref|YP_002341371.1| F0F1 ATP synthase subunit beta [Bacillus cereus AH187] gi|222098776|ref|YP_002532834.1| f0f1 ATP synthase subunit beta [Bacillus cereus Q1] gi|229142046|ref|ZP_04270571.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST26] gi|81830903|sp|Q72XE8|ATPB_BACC1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226739979|sp|B7HY64|ATPB_BACC7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808131|sp|B9IRT7|ATPB_BACCQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|42740407|gb|AAS44330.1| ATP synthase F1, beta subunit [Bacillus cereus ATCC 10987] gi|206744863|gb|EDZ56268.1| ATP synthase F1, beta subunit [Bacillus cereus H3081.97] gi|217063479|gb|ACJ77729.1| ATP synthase F1, beta subunit [Bacillus cereus AH187] gi|221242835|gb|ACM15545.1| ATP synthase F1, beta subunit [Bacillus cereus Q1] gi|228641335|gb|EEK97641.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST26] Length = 468 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410 >gi|1515180|emb|CAA90180.1| SepB [Escherichia coli] Length = 290 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 88/227 (38%), Positives = 129/227 (56%), Gaps = 2/227 (0%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPID 114 S L +VI I+ D V++ P + G + + G F+I GR+I+ +G+P++ Sbjct: 64 SQRLAEVIAIDEDEVFLLPFEHVSGMCCGQWLSYQGDEFKIRVGDALLGRLIDGIGRPME 123 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + ++ P + RQ +++ F G+R ID GQRIG+FAGSG+GK Sbjct: 124 SNIVAPYLPFERSLYAEPPDPLLRQVIDQPFILGVRAIDGLLTCGIGQRIGIFAGSGVGK 183 Query: 175 STLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA 234 STLL M D ++++L+GERGREV EF+ L K V+VV TSD + R A Sbjct: 184 STLLGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKA 243 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 TA TIAEYF +G NVLL++DS+TR+A + R++ SGE P RG Sbjct: 244 AFTATTIAEYFRDQGKNVLLMMDSVTRYARAARDVGLASGE-PDVRG 289 >gi|315649870|ref|ZP_07902952.1| ATP synthase F1, beta subunit [Paenibacillus vortex V453] gi|315274669|gb|EFU38051.1| ATP synthase F1, beta subunit [Paenibacillus vortex V453] Length = 466 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/307 (33%), Positives = 164/307 (53%), Gaps = 19/307 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDI 154 + GRV N LG+PID GD+ EI + + PP + +TGI+VID+ Sbjct: 87 SATLGRVFNVLGEPIDN-----AGDVVSEINNPIHREAPPYDELSTQAEMLETGIKVIDL 141 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG 211 P G +IG+F G+G+GK+ + + + IS+ VGER RE + + + Sbjct: 142 LAPYQKGGKIGLFGGAGVGKTVAIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MS 200 Query: 212 DN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 D+ + K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 201 DSGVINKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGKDVLLFIDNIFRFTQAGSE 260 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ SE+ RL ERI + +KG++T++ ++ V D++ DP + Sbjct: 261 VSALLGRMPSAVGYQPTLASEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATT 318 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387 + LD L R ++E G YP VDPLAS SR LA + + + + ++ R+ E + Sbjct: 319 FAHLDATTNLERKISEMGIYPAVDPLASSSRILAPEIVGEEHYNVAQGVKKILARYNELQ 378 Query: 388 DIRLIGG 394 DI I G Sbjct: 379 DIIAILG 385 >gi|225378697|ref|ZP_03755918.1| hypothetical protein ROSEINA2194_04367 [Roseburia inulinivorans DSM 16841] gi|225209534|gb|EEG91888.1| hypothetical protein ROSEINA2194_04367 [Roseburia inulinivorans DSM 16841] Length = 463 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 102/298 (34%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG PID D G + I K P + ++ +TGI+V+D+ P G Sbjct: 89 GRMFNVLGNPIDEIDPP-TGVETWPIHRKAPAFEEQATSQEMLETGIKVVDLLCPYQKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ + + + + VGER RE + + E + K+ Sbjct: 148 KIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFTGVGERTREGNDLYYEMKESGVIDKTT 207 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ G +P Sbjct: 208 MVFGQMNEPPGARMRVALTGLTMAEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRMP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD V Sbjct: 268 SAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L RS+AE G YP VDPLAS SR+ D E ++ + ++ +++E +DI I G Sbjct: 326 LERSIAELGIYPAVDPLASTSRILDPRIIGQEHFEVARGVQEILQKYKELQDIIAILG 383 >gi|91203664|emb|CAJ71317.1| strongly similar to ATPD gene encoding subunit beta of ATP synthase [Candidatus Kuenenia stuttgartiensis] Length = 454 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 102/304 (33%), Positives = 163/304 (53%), Gaps = 11/304 (3%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRV 151 +I S GR N G+PIDG + D ++ + K PP + Q G +TGI++ Sbjct: 75 LKIPVSKNCLGRAFNIFGEPIDGKPPVE--DHTLIPIHKPPPGLQEQIPASGILETGIKI 132 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIED 208 ID+ +P G +IG+F G+G+GK+ LL F + + I VGER RE E + Sbjct: 133 IDLLSPFPKGGKIGLFGGAGVGKTVLLMEFIYKVVKVYSGISIFCGVGERMREGHELWRE 192 Query: 209 Y-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266 D L +++V ESP +R PLTA+T+AE+F + G ++L ++D++ RF + Sbjct: 193 MERQDILSNAILVFGQMCESPGIRFRVPLTAITLAEFFRDELGSDILFLMDNVYRFIQAG 252 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G L GY ++ SEL + ERI ++G+IT+V ++ V D+ DP Sbjct: 253 NEVSVLLGRLSSRVGYQPTLLSELAEVEERI--VSTQRGSITSVQAIYVPADDITDPAVA 310 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 +V LD +VL+R +A +G YP +DPL S S+L + +S S+T + R+++ Sbjct: 311 NVFPHLDTTVVLSREIASKGLYPAIDPLLSTSKLLSPEDVGERHYQISRSVTEHLSRYKK 370 Query: 386 TRDI 389 DI Sbjct: 371 LLDI 374 >gi|1929513|gb|AAB51466.1| ATP synthase subunit beta [Moorella thermoacetica] Length = 462 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID + + + I P +Q + +TGI+V+D+ P Sbjct: 83 ATLGRLFNVLGEPIDNQGPVETTE-RLPIHRPAPSFEEQQPSTEVLETGIKVVDLLAPYA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ R+ ++ + S VGER RE + ++E L+ Sbjct: 142 KGGKIGLFGGAGVGKTVLIMELIRNIAYEHGGFSVFSGVGERTREGNDLYLEMKESGVLE 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+ EYF + +VLL +D+I RF E++ Sbjct: 202 KTALVFGQMNEPPGARLRVGLTGLTMPEYFRDPEAQDVLLFIDNIFRFVQPGSEVSALLA 261 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 262 RMPSAVGYQPTLPTEMGPLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDA 319 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+R +AE G YP VDPL S SR+ D + + ++V + ++ R++E +DI I Sbjct: 320 TTVLSRQIAELGIYPAVDPLDSTSRILDPRVLGEEHYQVVRGVQQVLQRYKELQDIIAIL 379 Query: 394 G 394 G Sbjct: 380 G 380 >gi|84515110|ref|ZP_01002473.1| ATP synthase subunit B [Loktanella vestfoldensis SKA53] gi|84511269|gb|EAQ07723.1| ATP synthase subunit B [Loktanella vestfoldensis SKA53] Length = 474 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 104/310 (33%), Positives = 168/310 (54%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G PID +G+ + I + PP + + TGI+VID+ P Sbjct: 84 ATLGRIMNVVGAPIDEKGPIGETE-RRSIHADAPPFEAQSTASEVLVTGIKVIDLLAPYA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE EFIE + Sbjct: 143 KGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGYSVFAGVGERTREGNDLYYEFIESGV 200 Query: 211 G--DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 D+L KS V V +E P R L+ +T+AE F + G +VL +D+I RF + Sbjct: 201 INIDDLTKSKVALVYGQMNEPPGARMRVALSGLTMAESFRDQSGSDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ ++ ERI + + G+IT+V ++ V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKSGSITSVQAIYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VLNR+++E+G YP VDPL S SRL D A +E K+ + + +++ R++ Sbjct: 319 ATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLLDPAIVGEEHYKVAADVQNMLQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|121999208|ref|YP_001003995.1| F0F1 ATP synthase subunit beta [Halorhodospira halophila SL1] gi|166201711|sp|A1WZT1|ATPB_HALHL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|121590613|gb|ABM63193.1| ATP synthase F1 subcomplex beta subunit [Halorhodospira halophila SL1] Length = 458 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 160/298 (53%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+P+D + K D I P + ++ +TGI+VID+ P G Sbjct: 83 LGRIMDVLGEPVDEAGEV-KTDERWSIHRNAPSYEEQSGGQELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF +G +VL+ +D+I R+ + +E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLMFIDNIYRYTLAGQEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD IV Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFAHLDATIV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLVIGQEHYDVARGVQGVLQRYKELKDIIAILG 377 >gi|300087662|ref|YP_003758184.1| ATP synthase F1 subunit beta [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527395|gb|ADJ25863.1| ATP synthase F1, beta subunit [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 463 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + K D I K PP ++ + +TGI+VID+ TP G Sbjct: 85 LGRIFNVLGEPLDNEGEV-KTDERWPIHRKAPPFEEQETSAQMLETGIKVIDLITPFARG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG + G+G+GK+ ++ R+ + + + VGER RE + + + K+ Sbjct: 144 GKIGAYGGAGVGKTVVIQELIRNIATEHGGFSVFAGVGERSREGNDLWNEMKDSGVIDKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276 +V +E P +R LT +T+AEYF + +VLL +D+I R+ + E++ G + Sbjct: 204 ALVFGQMNELPAVRLRIALTGLTMAEYFRDQEHRDVLLFIDNIYRYTLAGVEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + + G+IT+ ++ V D++ DP + LD I Sbjct: 264 PSAVGYQPTLATEMGQLQERI--TSTKNGSITSFQAIYVPADDYTDPGVVATFGHLDAVI 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L RSLA + +P VDPLAS SR+ D A +E V+ + ++ R+++ +D+ I G Sbjct: 322 ALERSLAAQALFPAVDPLASNSRILDPAVVGEEHYNVAREVQRVLQRYKDLQDVIAILG 380 >gi|167463135|ref|ZP_02328224.1| F0F1 ATP synthase subunit beta [Paenibacillus larvae subsp. larvae BRL-230010] gi|322383102|ref|ZP_08056929.1| F0F1 ATP synthase subunit beta-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321152764|gb|EFX45390.1| F0F1 ATP synthase subunit beta-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 468 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 166/308 (53%), Gaps = 15/308 (4%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 + PS GRV N LG+PIDGD G+ D L+ I P + + +TGI+V+ Sbjct: 87 VGPSTL--GRVYNVLGEPIDGD---GEADRTLTSPIHKPAPEYSDLTTQAEMLETGIKVV 141 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ + + + IS+ VGER RE + + Sbjct: 142 DLLAPYMKGGKIGLFGGAGVGKTVTMQELIHNIAQEHGGISVFAGVGERTREGNDLYHEM 201 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 + K+ +V +E P R L+ +T+AEYF +G +VLL +D+I RF + Sbjct: 202 KDSGVIAKTAMVFGQMNEPPGARLRVALSGLTMAEYFRDEEGRDVLLFIDNIFRFTQAGS 261 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + Sbjct: 262 EVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPAT 319 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD L RS+A +G +P VDPLAS SR+ +E ++ + ++ R++E Sbjct: 320 AFAHLDATTNLERSIAAKGIFPAVDPLASTSRILTPQIVGEEHYEVAQGVKEILQRYKEL 379 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 380 QDIIAILG 387 >gi|126736547|ref|ZP_01752287.1| ATP synthase F1, beta subunit [Roseobacter sp. CCS2] gi|126713860|gb|EBA10731.1| ATP synthase F1, beta subunit [Roseobacter sp. CCS2] Length = 474 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 168/310 (54%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G P+D +G+ D I ++ PP + + TGI+VID+ P Sbjct: 84 ATLGRIMNVVGDPVDEKGPIGEKD-RRSIHAEAPPFEAQSTASEVLVTGIKVIDLLAPYA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE EFIE + Sbjct: 143 KGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGYSVFAGVGERTREGNDLYYEFIESGV 200 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 ++L KS V V +E P R L+ +T+AE F + G +VL +D+I RF + Sbjct: 201 IDAEDLTKSKVALVYGQMNEPPGARMRVALSGLTMAESFRDQSGTDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ ++ ERI + + G+IT+V ++ V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKNGSITSVQAIYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384 + + LD VLNR+++E+G YP VDPL S SRL D A +E V++ + ++ R++ Sbjct: 319 ATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLLDPAIVGEEHYAVAADVQQMLQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|257125432|ref|YP_003163546.1| F0F1 ATP synthase subunit beta [Leptotrichia buccalis C-1013-b] gi|257049371|gb|ACV38555.1| ATP synthase F1, beta subunit [Leptotrichia buccalis C-1013-b] Length = 465 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 102/302 (33%), Positives = 161/302 (53%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR+ N LG+ +D + L + D+ E + K P+ +Q + +TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEAVDEGEKLDE-DVLRESIHKDAPSFEQQGTDSEILETGIKVVDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + +S+ VGER RE R+ + + Sbjct: 142 LKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGRDLYNEMTESGVI 201 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LTA+T+AEYF K G NVLL +D+I RF + E++ Sbjct: 202 DKTALVYGQMNEPPGARLRVGLTALTMAEYFRDKEGQNVLLFIDNIFRFTQAGSEVSALL 261 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 262 GRMPSAVGYQPNLATEMGALQERI--TSTNTGSITSVQAVYVPADDLTDPAPATTFAHLD 319 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 VL+R +A G YP VDPL S SR+ + +E K+ ++ R++E +DI I Sbjct: 320 ATTVLSRQIASLGIYPAVDPLDSTSRILEPEIVGNEHYKIARETQKVLQRYKELQDIIAI 379 Query: 393 GG 394 G Sbjct: 380 LG 381 >gi|317495894|ref|ZP_07954257.1| ATP synthase F1 [Gemella moribillum M424] gi|316914071|gb|EFV35554.1| ATP synthase F1 [Gemella moribillum M424] Length = 471 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ +D + G ++ E + K P + +TGI+VID+ P Sbjct: 90 LGRVFNVLGEAVDHGEEAG-AEVQKESIHKEAPTFEELSTHVEVLETGIKVIDLLAPYIK 148 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + E + K Sbjct: 149 GGKIGLFGGAGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINK 208 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 209 TAMVFGQMNEPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 268 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ RL ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 MPSAVGYQPTLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 326 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R+L E G YP VDPLAS SR LA + + K+ +++ + ++ E +DI I G Sbjct: 327 TNLERALTEMGIYPAVDPLASTSRALAPEIVGEEHYKVATTIQRTLQKYRELQDIIAILG 386 >gi|294501860|ref|YP_003565560.1| ATP synthase F1 subunit beta [Bacillus megaterium QM B1551] gi|295707208|ref|YP_003600283.1| ATP synthase F1 subunit beta [Bacillus megaterium DSM 319] gi|302393677|sp|P12698|ATPB_BACMQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|294351797|gb|ADE72126.1| ATP synthase F1, beta subunit [Bacillus megaterium QM B1551] gi|294804867|gb|ADF41933.1| ATP synthase F1, beta subunit [Bacillus megaterium DSM 319] Length = 473 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID D + G I + P N + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGEKIDLDAPIDAGARRDPIHRQAPKFENLSTQAEILETGIKVVDLLAPYI 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + +K Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIK 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R+ LT +T+AEYF +G +VL +D+I RF + E++ G Sbjct: 210 KTAMVFGQMNEPPGARQRVALTGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTSVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR L+ + + + + + R++E +DI I Sbjct: 328 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYAIARQVQQTLQRYKELQDIIAIL 387 Query: 394 G 394 G Sbjct: 388 G 388 >gi|190358289|sp|A1R7V3|ATPB_ARTAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 483 Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LGKP+D ++S K D I K P + + + +TGI+VID+ TP G Sbjct: 102 GHIFNVLGKPLDVEESEIKADAYWPIHRKAPSFASLEGSTEMLETGIKVIDLLTPYIKGG 161 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVLKDTA 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 222 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ ++ V D++ DP + + LD Sbjct: 282 SAVGYQPNLADEMGLLQERITSTKGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR+ D + D + ++ + +E +DI I G Sbjct: 340 LSREIASRGLYPAVDPLTSTSRILDPQYIGKDHYNTAVRVKQILQKNKELQDIIAILG 397 >gi|323705922|ref|ZP_08117493.1| ATP synthase F1, beta subunit [Thermoanaerobacterium xylanolyticum LX-11] gi|323534720|gb|EGB24500.1| ATP synthase F1, beta subunit [Thermoanaerobacterium xylanolyticum LX-11] Length = 461 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 112/329 (34%), Positives = 170/329 (51%), Gaps = 20/329 (6%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LGK +D LG K D M I P + V + +TGI+VID+ TP Sbjct: 84 LGRMFNVLGKTMD---ELGEVKADKYMPIHRDAPSFEEQSPVTEILETGIKVIDLLTPYA 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ R+ + I + VGER RE + + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIEELIRNIATEHGGYSIFTGVGERTREGNDLWHEMKESGVID 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G Sbjct: 201 KTAFVFGQMNEPPGARMRVALTGLTMAEYFRDEKHQDVLLFIDNIFRFVQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +EL L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 261 RMPSAVGYQPTLATELGALQERI--TSTRSGSITSVQAVYVPADDLTDPAPATTFTHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+RS+ E G YP VDPL S SR+ + +E V+ + ++ +++E +DI I Sbjct: 319 TTVLSRSIVEMGIYPAVDPLDSTSRILEPNIVGEEHYTVARRVQEILQKYKELQDIIAI- 377 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQ 419 G+D + D+ V++ I FL Q Sbjct: 378 ---LGMDELSDEDKLTVYRARKIQRFLSQ 403 >gi|78224596|ref|YP_386343.1| F0F1 ATP synthase subunit beta [Geobacter metallireducens GS-15] gi|118573539|sp|Q39Q56|ATPB_GEOMG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|78195851|gb|ABB33618.1| ATP synthase F1 subcomplex beta subunit [Geobacter metallireducens GS-15] Length = 470 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 99/303 (32%), Positives = 168/303 (55%), Gaps = 17/303 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D +G + E I + P +++ + F TGI+V+D+ P Sbjct: 92 LGRILNVIGEPVD---EMGPVNAEKEYGIHRESPSFVDQSTKVEAFTTGIKVVDLLAPYA 148 Query: 160 HGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDN 213 G +IG+F G+G+GK+ L+ ++ + F + + VGER RE + ++E Sbjct: 149 RGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFS--VFAGVGERTREGNDLWMEMKESGV 206 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 L K+ +V +E P R L+A++IAEYF +G NVLL +D+I RF + E++ Sbjct: 207 LDKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFIDNIFRFTQAGSEVSAL 266 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L ERI + KG+IT+V ++ V D+ DP + + L Sbjct: 267 LGRIPSAVGYQPTLATEMGELQERI--TSTTKGSITSVQAIYVPADDLTDPAPATAFAHL 324 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391 D VL+R +AE G YP VDPL S SR+ D +E ++ + +++ ++++ +DI Sbjct: 325 DATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYAIARQVQYVLQKYKDLQDIIA 384 Query: 392 IGG 394 I G Sbjct: 385 ILG 387 >gi|257459080|ref|ZP_05624199.1| ATP synthase F1, beta subunit [Campylobacter gracilis RM3268] gi|257443465|gb|EEV18589.1| ATP synthase F1, beta subunit [Campylobacter gracilis RM3268] Length = 465 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N G ID G+D K + I P N+ + F+TGI+V+D+ P Sbjct: 87 LGRIFNVTGDLIDEGEDE--KFETRWSIHRDPPSFENQSTKSEIFETGIKVVDLLAPYAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ ++ + F + + VGER RE + + L K Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESGVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G Sbjct: 205 VALTYGQMNEPPGARNRIALTGLTMAEYFRDELGLDVLMFIDNIFRFSQSGSEMSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ SE+ +L ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 265 IPSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR++AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I G Sbjct: 323 TVLNRAIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQAVLQKYKDLQDIIAILG 382 >gi|728922|sp|P41009|ATPB_BACCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|533290|dbj|BAA07248.1| ATPase subunit beta [Bacillus caldotenax] Length = 473 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 107/331 (32%), Positives = 173/331 (52%), Gaps = 17/331 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+PID + + D + + + P E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + KG+ T++ ++ V D++ DP + S LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTAKGSTTSIQAIYVPADDYTDPAPATTFSHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R++AE G YP VDPLAS SR LA + + ++ + + R++E +DI I Sbjct: 327 ATTNLERNVAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAI 386 Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ VH+ I FL Q+ Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413 >gi|142561|gb|AAA82526.1| ATP synthase beta subunit [Bacillus megaterium] Length = 472 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID D + G I + P N + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGEKIDLDAPIDAGARRDPIHRQAPKFENLSTQAEILETGIKVVDLLAPYI 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + +K Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIK 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R+ LT +T+AEYF +G +VL +D+I RF + E++ G Sbjct: 210 KTAMVFGQMNEPPGARQRVALTGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTSVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR L+ + + + + + R++E +DI I Sbjct: 328 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYAIARQVQQTLQRYKELQDIIAIL 387 Query: 394 G 394 G Sbjct: 388 G 388 >gi|283955273|ref|ZP_06372773.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni 414] gi|283793187|gb|EFC31956.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni 414] Length = 465 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 105/317 (33%), Positives = 168/317 (52%), Gaps = 27/317 (8%) Query: 103 GRVINALGKPID---GDDSLGK-----GDLSME----------IMSKVPPAMNRQRVEKG 144 G + ALG PI G+ LG+ GDL E + + PPA Q + Sbjct: 68 GLKVEALGAPISVPVGEKVLGRIFNVTGDLIDEGEEISFDKKWAIHRDPPAFEEQSTKSE 127 Query: 145 -FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGR 200 F+TGI+V+D+ P G ++G+F G+G+GK+ ++ + F + + VGER R Sbjct: 128 IFETGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTR 187 Query: 201 EVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258 E + + N L K + +E P R LT +T+AEYF + + +VL+ +D+ Sbjct: 188 EGNDLYNEMKESNVLDKVALCYGQMNEPPGARNRIALTGLTMAEYFRDEMELDVLMFIDN 247 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF+ S E++ G +P A GY ++ SE+ + ERI + +KG+IT+V +V V D Sbjct: 248 IFRFSQSGSEMSALLGRIPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPAD 305 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377 + DP +V + LD VLNR++AE+G YP VDPL S SR+ D +E K+ + Sbjct: 306 DLTDPAPATVFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQ 365 Query: 378 HLIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 366 SVLQKYKDLQDIIAILG 382 >gi|229199429|ref|ZP_04326092.1| ATP synthase subunit beta [Bacillus cereus m1293] gi|228584005|gb|EEK42160.1| ATP synthase subunit beta [Bacillus cereus m1293] gi|324329253|gb|ADY24513.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis serovar finitimus YBT-020] Length = 468 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGDAIDLDGEV-PSDVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410 >gi|149925408|ref|ZP_01913672.1| F0F1 ATP synthase subunit beta [Limnobacter sp. MED105] gi|149825525|gb|EDM84733.1| F0F1 ATP synthase subunit beta [Limnobacter sp. MED105] Length = 463 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 104/298 (34%), Positives = 157/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D + I P + +TGI+VID+ P G Sbjct: 88 GRIMDVLGRPIDEAGPVTT-DATRAIHQNAPAFDELSPSTELLETGIKVIDLICPFAKGG 146 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 147 KVGLFGGAGVGKTVNMMELINNIAKQHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 206 ALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLLFVDNIYRFTLAGTEVSALLGRMP 265 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ RL ERI + +KG+IT+V +V V D+ DP + + LD +V Sbjct: 266 SAVGYQPTLAEEMGRLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 323 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ + + R++E RDI I G Sbjct: 324 LSRDIASLGIYPAVDPLDSTSRQVDPNIIGEEHYNVARGVQQTLQRYKELRDIIAILG 381 >gi|119961004|ref|YP_948315.1| F0F1 ATP synthase subunit beta [Arthrobacter aurescens TC1] gi|119947863|gb|ABM06774.1| ATP synthase F1, beta subunit [Arthrobacter aurescens TC1] Length = 486 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LGKP+D ++S K D I K P + + + +TGI+VID+ TP G Sbjct: 105 GHIFNVLGKPLDVEESEIKADAYWPIHRKAPSFASLEGSTEMLETGIKVIDLLTPYIKGG 164 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 165 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVLKDTA 224 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 225 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 284 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ ++ V D++ DP + + LD Sbjct: 285 SAVGYQPNLADEMGLLQERITSTKGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 342 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR+ D + D + ++ + +E +DI I G Sbjct: 343 LSREIASRGLYPAVDPLTSTSRILDPQYIGKDHYNTAVRVKQILQKNKELQDIIAILG 400 >gi|71894420|ref|YP_278528.1| F0F1 ATP synthase subunit beta [Mycoplasma synoviae 53] gi|118573701|sp|Q4A604|ATPB_MYCS5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71851208|gb|AAZ43817.1| ATP synthase beta chain [Mycoplasma synoviae 53] Length = 464 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 159/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ + LG PID + L +G I +P ++ + +TGI+VID+ P G Sbjct: 89 LGRMFDVLGNPID-ELPLEEGGEKSSIHGPIPTYEQQKTTSEILETGIKVIDLLIPYAKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + +S+ VGER RE + + E L K+ Sbjct: 148 GKIGLFGGAGVGKTVLVQELINNIATQHNGLSVFTGVGERTREGNDLYYEMKAAGVLDKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K + +VLL +D+I RF + E++ G + Sbjct: 208 ALVFGQMNEPPGARMRVALTGLTMAEYFRDKQNQDVLLFIDNIFRFTQAGSEVSALLGRI 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + S LD Sbjct: 268 PSAVGYQPTLATEMGALQERI--TSTRSGSITSVQAVYVPADDLTDPAPATTFSHLDAKT 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G YP +DPL S SRL D E K+ + +++ RF+E +DI I G Sbjct: 326 VLDRNVAALGIYPAIDPLESSSRLLDPLVVGQEHYKVAQDVINILQRFKELQDIIAILG 384 >gi|291521330|emb|CBK79623.1| ATP synthase F1 subcomplex beta subunit [Coprococcus catus GD/7] Length = 462 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 162/298 (54%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID ++ + + + I K P + ++ +TGI+V+D+ P G Sbjct: 89 LGRIFNVLGEAIDNKEA-PQAEEHLPIHRKPPAFEDLSDEQEILETGIKVVDLLCPYQKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ R+ + + + VGER RE + + E + K+ Sbjct: 148 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYTEMSESGVINKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F G +VLL +D+I RF + E++ G +P Sbjct: 208 TMVFGQMNEPPGSRMRVGLTGLTMAEHFRDTGKDVLLFIDNIFRFTQAGSEVSALLGRVP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD V Sbjct: 268 SAVGYQPTLQTEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ E G YP VDPL S SR+ D +E ++ S+ ++ R++E +DI I G Sbjct: 326 LSRSIVELGIYPAVDPLESTSRMLDPHIVGEEHYRVARSVQEILQRYKELQDIIAILG 383 >gi|57237114|ref|YP_178126.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni RM1221] gi|86149745|ref|ZP_01067975.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151230|ref|ZP_01069445.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|86154037|ref|ZP_01072238.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|88597713|ref|ZP_01100946.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|121613266|ref|YP_999831.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|148926907|ref|ZP_01810585.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|157414420|ref|YP_001481676.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni 81116] gi|167004802|ref|ZP_02270560.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|205356482|ref|ZP_03223246.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp. jejuni CG8421] gi|218561788|ref|YP_002343567.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|81819580|sp|Q5HX59|ATPB_CAMJR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|122953061|sp|Q0PC30|ATPB_CAMJE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358271|sp|A8FJR2|ATPB_CAMJ8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358273|sp|A1VXJ0|ATPB_CAMJJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|57165918|gb|AAW34697.1| ATP synthase F1, beta subunit [Campylobacter jejuni RM1221] gi|85840013|gb|EAQ57272.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841577|gb|EAQ58824.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|85842451|gb|EAQ59665.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|87248948|gb|EAQ71910.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni 81-176] gi|88190017|gb|EAQ93993.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|112359494|emb|CAL34278.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145844484|gb|EDK21592.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp. jejuni CG8486] gi|157385384|gb|ABV51699.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp. jejuni 81116] gi|205345669|gb|EDZ32308.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp. jejuni CG8421] gi|284925400|gb|ADC27752.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni IA3902] gi|307747064|gb|ADN90334.1| ATP synthase subunit beta [Campylobacter jejuni subsp. jejuni M1] gi|315057547|gb|ADT71876.1| ATP synthase beta chain [Campylobacter jejuni subsp. jejuni S3] gi|315926955|gb|EFV06317.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315931501|gb|EFV10468.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. jejuni 327] Length = 465 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N G ID + + D I + PPA Q + F+TGI+V+D+ P Sbjct: 87 LGRIFNVTGDLIDEGEEI-SFDKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G Sbjct: 205 VALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 265 IPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR++AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I G Sbjct: 323 TVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382 >gi|332687028|ref|YP_004456802.1| ATP synthase subunit beta [Melissococcus plutonius ATCC 35311] gi|332371037|dbj|BAK21993.1| ATP synthase beta chain [Melissococcus plutonius ATCC 35311] Length = 468 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + K I P ++ +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEKPFPKEAKRSGIHKTAPTFEELSTSDEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATTFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S LA + + + + + H++ R+ E +DI I G Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEEHYHIATEVQHVLQRYRELQDIIAILG 385 >gi|229076520|ref|ZP_04209480.1| ATP synthase subunit beta [Bacillus cereus Rock4-18] gi|229099738|ref|ZP_04230663.1| ATP synthase subunit beta [Bacillus cereus Rock3-29] gi|229118801|ref|ZP_04248150.1| ATP synthase subunit beta [Bacillus cereus Rock1-3] gi|228664602|gb|EEL20095.1| ATP synthase subunit beta [Bacillus cereus Rock1-3] gi|228683627|gb|EEL37580.1| ATP synthase subunit beta [Bacillus cereus Rock3-29] gi|228706553|gb|EEL58766.1| ATP synthase subunit beta [Bacillus cereus Rock4-18] Length = 469 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D L D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|7436091|pir||JC5741 membrane-bound proton-translocating ATPase (EC 3.6.1.-) beta chain - Streptococcus mutans Length = 469 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 9/315 (2%) Query: 87 VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145 VF GR P GRV N LG ID D + I K P + + Sbjct: 73 VFDTGRAISVPVGKETLGRVFNVLGDTIDLDKPFAEDAERQPIHKKAPSFDDLSTSTEIL 132 Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREV 202 +TGI+VID+ P G ++G+F G+G+GK+ L+ + + IS+ VGER RE Sbjct: 133 ETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREG 192 Query: 203 RE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 + + E ++K+ +V +E P R LT +TIAEYF +G +VLL +D+I Sbjct: 193 NDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIF 252 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ Sbjct: 253 RFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDY 310 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379 DP + + LD L R L + G YP VDPLAS SR L+ + + + + + H+ Sbjct: 311 TDPAPATAFAHLDSTTNLERRLTQMGIYPAVDPLASSSRALSPEIVGQEHYDVATEVQHV 370 Query: 380 IHRFEETRDIRLIGG 394 + R+ E +DI I G Sbjct: 371 LQRYRELQDIIAILG 385 >gi|225872677|ref|YP_002754134.1| ATP synthase F1, beta subunit [Acidobacterium capsulatum ATCC 51196] gi|254808125|sp|C1F3N6|ATPB_ACIC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|225794312|gb|ACO34402.1| ATP synthase F1, beta subunit [Acidobacterium capsulatum ATCC 51196] Length = 480 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 167/307 (54%), Gaps = 20/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N +G+P+D + + + M I + P + E+ F+TG++VID+ P G Sbjct: 94 GRVLNVIGEPVDNMGPV-QAKVHMPIHRQAPAFDEQATGEEMFETGVKVIDLIQPFLKGG 152 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR----EFIEDYLGD- 212 +IG+F G+G+GK+ ++ ++ ++ F + + VGER RE EF E + D Sbjct: 153 KIGLFGGAGVGKTVVIQELINNVASKHGGFS--VFAGVGERTREGNDLWLEFQEAGVIDI 210 Query: 213 ---NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 + K+ ++ E P R LT +T+AEYF +G + LL +D+I RF + E Sbjct: 211 HDFSKSKAALIYGQMTEPPGARLRVALTGLTVAEYFRDQEGADTLLFIDNIFRFTQAGSE 270 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++T G +P A GY ++ +E+ L ERI + +KG++T+V +V V D+ DP + Sbjct: 271 VSTLLGRMPSAVGYQPNLATEMGELQERI--TSTKKGSVTSVQAVYVPADDMTDPAPATT 328 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R L+E G YP VDPLAS SR+ A E + + ++ R+++ + Sbjct: 329 FAHLDATTVLSRPLSELGIYPAVDPLASTSRILTPAVVGQEHYDVAQGVKRILQRYKDLQ 388 Query: 388 DIRLIGG 394 DI I G Sbjct: 389 DIIAILG 395 >gi|228942452|ref|ZP_04104989.1| ATP synthase subunit beta [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975384|ref|ZP_04135940.1| ATP synthase subunit beta [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228982021|ref|ZP_04142314.1| ATP synthase subunit beta [Bacillus thuringiensis Bt407] gi|228777685|gb|EEM25959.1| ATP synthase subunit beta [Bacillus thuringiensis Bt407] gi|228784366|gb|EEM32389.1| ATP synthase subunit beta [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817194|gb|EEM63282.1| ATP synthase subunit beta [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326943103|gb|AEA18999.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis serovar chinensis CT-43] Length = 468 Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D L D+ + + + PA +VE +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410 >gi|320108421|ref|YP_004184011.1| ATP synthase F1 subunit beta [Terriglobus saanensis SP1PR4] gi|319926942|gb|ADV84017.1| ATP synthase F1, beta subunit [Terriglobus saanensis SP1PR4] Length = 480 Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 104/308 (33%), Positives = 164/308 (53%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV+N +G+P+D LG + M I + P + E+ F+TGI+V+D+ P Sbjct: 93 LGRVLNVIGEPVD---ELGPVQTQKRMPIHRQAPAFDEQSTSEEMFETGIKVVDLIQPFL 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVR----EFIEDYLGD 212 G +IG+ G+G+GK+ L+ + + + VGER RE EF E + D Sbjct: 150 KGGKIGLMGGAGVGKTVLIQELINNVAMQHGGFSVFAGVGERTREGNDLWMEFQESGVID 209 Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 K+ ++ E P R LTA+TIAE+F +G + LL +D+I RF + Sbjct: 210 PNDWKKSKAALIYGQMTEPPGARLRVALTALTIAEHFRDEEGADTLLFIDNIFRFTQAGS 269 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++T G +P A GY ++ SE+ +L ERI + +KG++T+V ++ V D+ DP + Sbjct: 270 EVSTLLGRMPSAVGYQPNLASEMGQLQERI--TSTKKGSVTSVQAIYVPADDFTDPAPAT 327 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VLNR+L E G YP VDPLAS SR L+ + + S+ ++ R+++ Sbjct: 328 TFAHLDATTVLNRALTEIGIYPAVDPLASNSRILSPRIVGEEHYNTAQSVKAILQRYKDL 387 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 388 QDIIAILG 395 >gi|38906123|gb|AAR27814.1| ATP synthase beta chain [Lactobacillus rhamnosus] Length = 371 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PID ++ G I P + + +TGI+VID+ P G Sbjct: 28 LGRVFNVLGDPIDDGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 87 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E L+ + Sbjct: 88 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 147 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 148 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 207 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 208 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 265 Query: 337 VLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L R L E+G YP VDPL +S S L + + K+ + + ++ R+ E +DI Sbjct: 266 NLERRLTEQGIYPAVDPLESSSSALTPEIVGEEHYKVATEVQQVLQRYRELQDI 319 >gi|331091995|ref|ZP_08340826.1| ATP synthase subunit beta [Lachnospiraceae bacterium 2_1_46FAA] gi|330402196|gb|EGG81767.1| ATP synthase subunit beta [Lachnospiraceae bacterium 2_1_46FAA] Length = 463 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 159/294 (54%), Gaps = 11/294 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + D+ + + PA Q E + +TGI+VID+ P G Sbjct: 90 GRIFNVLGEAID--EKPAPTDVEYAPIHRKAPAFEEQATEAEMLETGIKVIDLLCPYQKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + + + VGER RE + + + + K+ Sbjct: 148 GKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTGVGERTREGNDLYYEMMESGVINKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ G + Sbjct: 208 AMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRM 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD + Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDAKV 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 VL+R++ E G YP VDPL S SR+ D +E K+ + ++ +++E +DI Sbjct: 326 VLSRAITELGIYPAVDPLESSSRMLDPHIVGEEHYKVARGVQEILQKYKELQDI 379 >gi|228961569|ref|ZP_04123178.1| ATP synthase subunit beta [Bacillus thuringiensis serovar pakistani str. T13001] gi|229050976|ref|ZP_04194525.1| ATP synthase subunit beta [Bacillus cereus AH676] gi|229130555|ref|ZP_04259511.1| ATP synthase subunit beta [Bacillus cereus BDRD-Cer4] gi|228652894|gb|EEL08776.1| ATP synthase subunit beta [Bacillus cereus BDRD-Cer4] gi|228722353|gb|EEL73749.1| ATP synthase subunit beta [Bacillus cereus AH676] gi|228798051|gb|EEM45055.1| ATP synthase subunit beta [Bacillus thuringiensis serovar pakistani str. T13001] Length = 459 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D L D+ + + + PA +VE +TGI+V+D+ P Sbjct: 78 ATLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 135 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 136 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 194 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 195 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 254 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 255 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 312 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 313 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 372 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 373 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 401 >gi|199597576|ref|ZP_03211005.1| F0F1 ATP synthase subunit beta [Lactobacillus rhamnosus HN001] gi|258508179|ref|YP_003170930.1| F0F1 ATP synthase subunit beta [Lactobacillus rhamnosus GG] gi|199591599|gb|EDY99676.1| F0F1 ATP synthase subunit beta [Lactobacillus rhamnosus HN001] gi|257148106|emb|CAR87079.1| ATP synthase B chain [Lactobacillus rhamnosus GG] Length = 488 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PID ++ G I P + + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDPIDDGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E L+ + Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L R L E+G YP VDPL +S S L + + K+ + + ++ R+ E +DI Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTPEIVGEEHYKVATEVQQVLQRYRELQDI 380 >gi|192289482|ref|YP_001990087.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris TIE-1] gi|192283231|gb|ACE99611.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris TIE-1] Length = 474 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 102/294 (34%), Positives = 160/294 (54%), Gaps = 10/294 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR+++ +G D +L D + PPA+N + F+TG++VID+ PL G Sbjct: 91 GRLLDVVGTVQDRGLAL-PSDTPRRGIHNPPPALNEETSTSAVFETGVKVIDLLAPLAQG 149 Query: 162 QRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKS 217 + +F G+G+GK+ L+ + A + + + + + VGER RE E + D L ++ Sbjct: 150 GKAAMFGGAGVGKTVLVMELIHAMVEKYQGISVFAGVGERSREGHELLTDMQRSGVLART 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 V+V +E P R PLTA+TIAEYF K NVLL++D++ RF + E+++ G L Sbjct: 210 VLVYGQMNEPPGARWRVPLTALTIAEYFRDQKHQNVLLLMDNVFRFVQAGSELSSLLGRL 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P GY ++ +E+ L ERI + +TA+ +V V D+ DP ++ S D I Sbjct: 270 PSRVGYQPTLATEVASLQERI--ASVAGAAVTAIQAVYVPADDFTDPAVTTISSHTDSVI 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 +L+RSLA +G YP VDPLAS S L D +E +L + RF++ +DI Sbjct: 328 MLSRSLAAQGFYPAVDPLASSSVLLDPRVVGEEHYRLAERCRETLARFKDLQDI 381 >gi|254498507|ref|ZP_05111233.1| F0F1 ATP synthase subunit beta [Legionella drancourtii LLAP12] gi|254352283|gb|EET11092.1| F0F1 ATP synthase subunit beta [Legionella drancourtii LLAP12] Length = 396 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 107/313 (34%), Positives = 165/313 (52%), Gaps = 10/313 (3%) Query: 84 GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G LV+ G +I S GR++N G+P+DG + L + +I++K P E Sbjct: 4 GLLVYDQGTSLQIPVSPNCLGRLLNVFGEPLDGGEPLQTKEYR-DILAKPAPIEMTTTKE 62 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERG 199 +TGI+VID+ P G + G+F G+G+GK+ LL F S IS+ VGER Sbjct: 63 TILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTILLMEFMHSIIQLHQGISVFAGVGERI 122 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257 RE E + + K+++V DESP +R A L+A+T AEY + VL ++D Sbjct: 123 REGHELWHEMKSAGVMDKTLMVFGQMDESPGVRFRAGLSALTYAEYLRDTVAHEVLFLVD 182 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + EI+ G +P GY ++ +E+ L ERI + KG++T+V +V V Sbjct: 183 NIYRFVQAGSEISGLLGRMPANVGYQPTLMTEIAELEERI--TSTAKGSVTSVQAVYVPA 240 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSL 376 D+ +DP + + LD +VL+RS A +G YP VD LAS S+ DK + + ++ Sbjct: 241 DDMSDPAVTGIITHLDSIVVLSRSQAGKGIYPAVDALASKSKFMDKIVLGERHYSIAQAV 300 Query: 377 THLIHRFEETRDI 389 + R+ E DI Sbjct: 301 REHLARYRELEDI 313 >gi|229551980|ref|ZP_04440705.1| H(+)-transporting two-sector ATPase [Lactobacillus rhamnosus LMS2-1] gi|258539394|ref|YP_003173893.1| F0F1 ATP synthase subunit beta [Lactobacillus rhamnosus Lc 705] gi|229314715|gb|EEN80688.1| H(+)-transporting two-sector ATPase [Lactobacillus rhamnosus LMS2-1] gi|257151070|emb|CAR90042.1| ATP synthase B chain [Lactobacillus rhamnosus Lc 705] Length = 488 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PID ++ G I P + + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDPIDDGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E L+ + Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L R L E+G YP VDPL +S S L + + K+ + + ++ R+ E +DI Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTPEIVGEEHYKVATEVQQVLQRYRELQDI 380 >gi|587507|emb|CAA54205.1| ATPase beta-subunit [Peptococcus niger] Length = 427 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G PID + + I P + + ++ +TGI+V+D+ P Sbjct: 93 ATLGRLMNVVGDPIDEAGEV-PSETRWPIHRSAPTYVQQNPSKEILETGIKVVDLLCPYV 151 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREF-IEDYLGDNLK 215 G +IG+F G+G+GK+ L+ R+ ++ + + VGER RE ++ +E + Sbjct: 152 KGGKIGLFGGAGVGKTVLIQELIRNIAYEHGGYSVFAGVGERTREGKDLLVEMRESGVID 211 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 212 KTSLVFGQMNEPPGARMRIALTGLTVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLG 271 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ + ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 272 RMPSAVGYQPTLATEMGTMQERI--TSTDKGSITSVQAVYVPADDLTDPAPATTFAHLDA 329 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 VL RS++E+G YP VDPLAS SR+ D +E ++ + ++ + E +DI Sbjct: 330 TTVLERSISEKGIYPAVDPLASTSRILDPRIVGEEHYEIARDVQEVLQEYRELQDI 385 >gi|227535354|ref|ZP_03965403.1| H(+)-transporting two-sector ATPase [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227186950|gb|EEI67017.1| H(+)-transporting two-sector ATPase [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 488 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 154/294 (52%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG IDG ++ G I P + + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDSIDGGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E L+ + Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L R L E+G YP VDPL S S DE K+ + + ++ R+ E +DI Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTPEIVGDEHYKVATEVQQVLQRYRELQDI 380 >gi|30023337|ref|NP_834968.1| F0F1 ATP synthase subunit beta [Bacillus cereus ATCC 14579] gi|47569800|ref|ZP_00240471.1| ATP synthase F1, beta subunit [Bacillus cereus G9241] gi|218231162|ref|YP_002370080.1| F0F1 ATP synthase subunit beta [Bacillus cereus B4264] gi|229112719|ref|ZP_04242252.1| ATP synthase subunit beta [Bacillus cereus Rock1-15] gi|229147846|ref|ZP_04276187.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST24] gi|296505733|ref|YP_003667433.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis BMB171] gi|81837221|sp|Q814W2|ATPB_BACCR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226739978|sp|B7HFK1|ATPB_BACC4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|29898898|gb|AAP12169.1| ATP synthase beta chain [Bacillus cereus ATCC 14579] gi|47553542|gb|EAL11922.1| ATP synthase F1, beta subunit [Bacillus cereus G9241] gi|218159119|gb|ACK59111.1| ATP synthase F1, beta subunit [Bacillus cereus B4264] gi|228635496|gb|EEK91985.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST24] gi|228670700|gb|EEL26011.1| ATP synthase subunit beta [Bacillus cereus Rock1-15] gi|296326785|gb|ADH09713.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis BMB171] Length = 468 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D L D+ + + + PA +VE +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410 >gi|153951038|ref|YP_001397361.1| F0F1 ATP synthase subunit beta [Campylobacter jejuni subsp. doylei 269.97] gi|190358272|sp|A7H1I1|ATPB_CAMJD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|152938484|gb|ABS43225.1| ATP synthase F1, beta subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 484 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 162/299 (54%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR+ N G ID + + D I + PPA Q + F+TGI+V+D+ P G Sbjct: 88 GRIFNVTGDLIDEGEEI-PFDKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR++AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I G Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382 >gi|254250201|ref|ZP_04943521.1| ATPase FliI/YscN [Burkholderia cenocepacia PC184] gi|124876702|gb|EAY66692.1| ATPase FliI/YscN [Burkholderia cenocepacia PC184] Length = 386 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/185 (46%), Positives = 115/185 (62%), Gaps = 6/185 (3%) Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++ LG+P+D LG G + P + R+ ++ F TG+RVID L Sbjct: 34 GRVLDGLGRPLD---DLGPVTGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGI 90 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVV 219 GQR+G+FA SG+GKSTLL M AR D +I+LVGERGREVREFIE L ++ +S+V Sbjct: 91 GQRVGIFAPSGVGKSTLLGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIV 150 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VV+TSD + R + L A IAE+F G VLL++DS+TRFA + RE+ SGE P Sbjct: 151 VVSTSDRPAMERVKSALVATAIAEHFRDAGKRVLLLVDSLTRFARAQREVGLASGEPPTR 210 Query: 280 RGYPT 284 R +P Sbjct: 211 RSFPA 215 >gi|222152834|ref|YP_002562011.1| F0F1 ATP synthase subunit beta [Streptococcus uberis 0140J] gi|254808167|sp|B9DRT6|ATPB_STRU0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|222113647|emb|CAR41560.1| ATP synthase beta chain [Streptococcus uberis 0140J] Length = 468 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 162/300 (54%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG+ ID D+ D + E + K PA + +TGI+VID+ P Sbjct: 89 LGRVFNVLGETIDLDEPFA-ADAAREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ ++ V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + ++ + + ++ R+ E +DI I G Sbjct: 326 TNLERKLTQMGIYPAVDPLASSSRALSPEIVGQEHYEVATEVQRVLQRYRELQDIIAILG 385 >gi|311033322|ref|ZP_07711412.1| F0F1 ATP synthase subunit beta [Bacillus sp. m3-13] Length = 472 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 106/330 (32%), Positives = 168/330 (50%), Gaps = 15/330 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID D + G I + P + +TGI+V+D+ P Sbjct: 89 VTLGRVFNVLGENIDLDAPIAAGSRRDPIHRQAPTFDQLSTDVEILETGIKVVDLLAPYI 148 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + +K Sbjct: 149 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIK 208 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF +G +VL +D+I RF + E++ G Sbjct: 209 KTAMVFGQMNEPPGARMRVALTGLTMAEYFRDDQGQDVLFFMDNIFRFTQAGSEVSALLG 268 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 269 RMPSAVGYQPTLATEMGQLQERI--TSTSVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 326 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR LA + D + + + R++E +DI I Sbjct: 327 TTNLERKLSEMGIYPAVDPLASTSRALAPEVVGDDHYAVAREVQVTLQRYKELQDIIAI- 385 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ VH+ I FL Q+ Sbjct: 386 ---LGMDELTDEDKLTVHRARRIQFFLSQN 412 >gi|1168579|sp|P42467|ATPB_PEPNI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 427 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 160/296 (54%), Gaps = 9/296 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G PID + + I P + + ++ +TGI+V+D+ P Sbjct: 93 ATLGRLMNVVGDPIDEAGEV-PSETRWPIHRSAPTYVQQNPSKEILETGIKVVDLLCPYV 151 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREF-IEDYLGDNLK 215 G +IG+F G+G+GK+ L+ R+ ++ + + VGER RE ++ +E + Sbjct: 152 KGGKIGLFGGAGVGKTVLIQELIRNIAYEHGGYSVFAGVGERTREGKDLLVEMRESGVID 211 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 212 KTSLVFGQMNEPPGARMRIALTGLTVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLG 271 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ + ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 272 RMPSAVGYQPTLATEMGTMQERI--TSTDKGSITSVQAVYVPADDLTDPAPATTFAHLDA 329 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 VL RS++E+G YP VDPLAS SR+ D +E ++ + ++ + E +DI Sbjct: 330 TTVLERSISEKGIYPAVDPLASTSRILDPRIVGEEHYEIARDVQEVLQEYRELQDI 385 >gi|239623864|ref|ZP_04666895.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521895|gb|EEQ61761.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 466 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 165/300 (55%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG IDG SL D ++ + PP+ Q V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGDTIDGGQSLE--DEEKWVIHRDPPSFEDQSPVVEMLETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216 +IG+F G+G+GK+ L+ + + I + VGER RE + + +G++ L+K Sbjct: 144 GKIGLFGGAGVGKTVLIQELITNIATEHGGYSIFTGVGERSREGNDLWTE-MGESGVLEK 202 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDVEHQNVLLFIDNIFRFVQAGSEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLATEVGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ ++ E ++ + + ++ +++E +DI I G Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEEDVVGKEHYEVANKVQQMLQKYKELQDIIAILG 380 >gi|283955551|ref|ZP_06373046.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283793012|gb|EFC31786.1| ATP synthase F1 sector beta subunit [Campylobacter jejuni subsp. jejuni 1336] Length = 465 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N G ID + + D I + PPA Q + F+TGI+V+D+ P Sbjct: 87 LGRIFNVTGDLIDEGEEI-PFDKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDLLAPYAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G Sbjct: 205 VALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 265 IPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR++AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I G Sbjct: 323 TVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382 >gi|322392085|ref|ZP_08065547.1| ATP synthase F1 sector beta subunit [Streptococcus peroris ATCC 700780] gi|321144985|gb|EFX40384.1| ATP synthase F1 sector beta subunit [Streptococcus peroris ATCC 700780] Length = 468 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 159/299 (53%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + G+ I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFGEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + A+ + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGAEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|251799778|ref|YP_003014509.1| ATP synthase F1 subunit beta [Paenibacillus sp. JDR-2] gi|247547404|gb|ACT04423.1| ATP synthase F1, beta subunit [Paenibacillus sp. JDR-2] Length = 467 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 166/304 (54%), Gaps = 13/304 (4%) Query: 99 ACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 A GRV N LG+PID +++ + +L + + PA + + +TGI+VID+ Sbjct: 88 AATLGRVFNVLGEPIDQAGEAVSETNLPIH---RQAPAFDELSTQSEILETGIKVIDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ + + + IS+ VGER RE + + Sbjct: 145 PYAKGGKIGLFGGAGVGKTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMKDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 L K+ +V +E P R+ LT +T+AEYF ++G +VLL +D+I RF + E++ Sbjct: 205 VLPKTAMVFGQMNEPPGARQRVALTGLTMAEYFRDAEGKDVLLFVDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L R ++E G +P VDPLAS SRL + +E + + ++ R++E +DI Sbjct: 323 LDATTNLERKISEMGIFPAVDPLASSSRLLNPEILGEEHYNVAQGVKRILQRYKELQDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|206895415|ref|YP_002246928.1| ATP synthase F1, beta subunit [Coprothermobacter proteolyticus DSM 5265] gi|226740182|sp|B5Y831|ATPB_COPPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|206738032|gb|ACI17110.1| ATP synthase F1, beta subunit [Coprothermobacter proteolyticus DSM 5265] Length = 451 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 170/328 (51%), Gaps = 13/328 (3%) Query: 70 VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V +G E I GD G+ I GRV++ +G P+D + + S+ Sbjct: 46 VRTVALGPTEGIRRGDKATALGKPMTIKVGEQLIGRVLSGIGAPLDQKEEPEGEERSV-- 103 Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 VPP + V +TGI+ +D+ P G +IG+F G+G+GK+ L+ + Sbjct: 104 -FNVPPQVTAVLPVSTVLETGIKALDLLAPFPRGGKIGLFGGAGVGKTVLVMELIHNVAI 162 Query: 188 DK---VIISLVGERGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAE 243 + + VGER RE +E E+ + +V++ +E P +R + P A T+AE Sbjct: 163 KHRGYSVFAGVGERTREGQELWEEMRESGVMDHLVMIFGQMNEPPGVRAITPYAAATVAE 222 Query: 244 YFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 Y S+ G +LL +D+I R+A + E++T G +P A GY ++FSE+ ++ ERI + Sbjct: 223 YLRSQYGGEILLFMDNIFRYAQAGMEVSTLLGRMPSAMGYQPTLFSEVAQIEERI--NSL 280 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +G IT+V +V V D+ DP ++ LD +VL+R+L E G YP VDPL S S++ D Sbjct: 281 AEGAITSVQAVYVPADDITDPAPATIFGHLDSSVVLSRALTEVGIYPAVDPLQSSSKMLD 340 Query: 363 -KAWSADEKKLVSSLTHLIHRFEETRDI 389 + + ++ + + R+EE +DI Sbjct: 341 PEVVGYNHVQVAGRVKEFLQRYEELKDI 368 >gi|225420333|ref|ZP_03762636.1| hypothetical protein CLOSTASPAR_06677 [Clostridium asparagiforme DSM 15981] gi|225041019|gb|EEG51265.1| hypothetical protein CLOSTASPAR_06677 [Clostridium asparagiforme DSM 15981] Length = 467 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ IDG DSL D + + PPA Q V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGETIDGGDSLT--DSPQWEIHREPPAFEDQSPVVEMLETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + I + VGER RE + + E L+K+ Sbjct: 144 GKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLEKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G + Sbjct: 204 ALVFGQMNEPPGSRMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFVQAGSEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + + G++T+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLATEMGQLQERI--TSTKNGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + E + + ++ +++E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLESNSRILEAEVVGQEHYETARQVQQILQKYKELQDIIAILG 380 >gi|53722974|ref|YP_111959.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei K96243] gi|52213388|emb|CAH39431.1| ATP synthase beta chain [Burkholderia pseudomallei K96243] Length = 511 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G P D +L I PP ++ F TGI+ Sbjct: 81 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 140 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205 VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE E Sbjct: 141 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 198 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF Sbjct: 199 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP Sbjct: 259 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 317 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 376 Query: 383 FEETRDI 389 + E +D+ Sbjct: 377 YRELQDV 383 >gi|223932788|ref|ZP_03624785.1| ATP synthase F1, beta subunit [Streptococcus suis 89/1591] gi|253751912|ref|YP_003025053.1| ATP synthase beta chain [Streptococcus suis SC84] gi|253753735|ref|YP_003026876.1| ATP synthase beta chain [Streptococcus suis P1/7] gi|253755387|ref|YP_003028527.1| ATP synthase beta chain [Streptococcus suis BM407] gi|302023926|ref|ZP_07249137.1| F0F1 ATP synthase subunit beta [Streptococcus suis 05HAS68] gi|330832977|ref|YP_004401802.1| F0F1 ATP synthase subunit beta [Streptococcus suis ST3] gi|190358731|sp|A4W1V7|ATPB_STRS2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358732|sp|A4VVJ9|ATPB_STRSY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|223898497|gb|EEF64861.1| ATP synthase F1, beta subunit [Streptococcus suis 89/1591] gi|251816201|emb|CAZ51828.1| ATP synthase beta chain [Streptococcus suis SC84] gi|251817851|emb|CAZ55604.1| ATP synthase beta chain [Streptococcus suis BM407] gi|251819981|emb|CAR46125.1| ATP synthase beta chain [Streptococcus suis P1/7] gi|319758273|gb|ADV70215.1| F0F1 ATP synthase subunit beta [Streptococcus suis JS14] gi|329307200|gb|AEB81616.1| F0F1 ATP synthase subunit beta [Streptococcus suis ST3] Length = 468 Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG ID ++S D E + K PA + +TGI+VID+ P Sbjct: 89 LGRVFNVLGDTIDLEESF-PADFEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + ++ R++E +DI I G Sbjct: 326 TNLERKLTQLGIYPAVDPLASSSRALAPQIVGEEHYAVAMEVKRVLQRYQELQDIIAILG 385 >gi|228968432|ref|ZP_04129422.1| ATP synthase subunit beta [Bacillus thuringiensis serovar sotto str. T04001] gi|228791248|gb|EEM38860.1| ATP synthase subunit beta [Bacillus thuringiensis serovar sotto str. T04001] Length = 459 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D L D+ + + + PA +VE +TGI+V+D+ P Sbjct: 78 VTLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 135 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 136 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 194 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 195 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 254 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 255 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 312 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 313 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 372 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 373 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 401 >gi|288939810|ref|YP_003442050.1| ATP synthase F1 subunit beta [Allochromatium vinosum DSM 180] gi|288895182|gb|ADC61018.1| ATP synthase F1, beta subunit [Allochromatium vinosum DSM 180] Length = 460 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID + K + I + P ++ + +TGI+VID+ P+ Sbjct: 81 ATLGRIMDVLGNPIDEQGEV-KSEARWSIHRQAPKLEDQAASTEILETGIKVIDLIMPIA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLK 215 G ++G+F G+G+GK+ L R+ + S+ VGER RE +F + G L Sbjct: 140 KGGKVGLFGGAGVGKTVTLMELIRNIAVEHSGFSVFAGVGERTREGNDFYHEMKDGGVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AEYF +G +VL+ +D+I R+ + E++ G Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLMFIDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ SE+ L ERI + G+IT+ +V V D+ DP + + LD Sbjct: 260 MPSAVGYQPTLASEMGALQERI--TSTRTGSITSFQAVYVPADDLTDPSPATTFAHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +AE G YP VDPL S SR+ D E + ++ + R++E +DI I G Sbjct: 318 LVLSRQIAELGIYPAVDPLDSTSRILDPNVVGTEHYETARAVQGTLQRYKELKDIIAILG 377 >gi|160881854|ref|YP_001560822.1| F0F1 ATP synthase subunit beta [Clostridium phytofermentans ISDg] gi|190358661|sp|A9KK92|ATPB_CLOPH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|160430520|gb|ABX44083.1| ATP synthase F1, beta subunit [Clostridium phytofermentans ISDg] Length = 472 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 160/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG PID ++ ++ + + PA Q + +TGI+V+D+ P Sbjct: 95 LGRMFNVLGNPIDEKEA--PKNVEYYPIHRKAPAFEEQSTQTEILETGIKVVDLLCPYQK 152 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + + + VGER RE + + + + K Sbjct: 153 GGKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTGVGERTREGNDLYYEMIDSGVINK 212 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF K G +VLL +D+I RF + E++ G Sbjct: 213 TTMVFGQMNEPPGARMRVGLTGLTMAEYFRDKSGKDVLLFIDNIFRFTQAGSEVSALLGR 272 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 273 MPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDAT 330 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+ E G YP VDPL S SR+ D +E K+ + ++ R++E +DI I G Sbjct: 331 TVLSRSIVELGIYPAVDPLESTSRMLDPRVVGEEHYKVARDVQEILQRYKELQDIIAILG 390 >gi|295107875|emb|CBL21828.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus obeum A2-162] Length = 463 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/302 (32%), Positives = 161/302 (53%), Gaps = 11/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPL 158 C GR+ N LG +DG D L D ++ + PP+ Q+ + +TGI+VID+ P Sbjct: 83 CTLGRLFNVLGDTVDGGDQLD--DAEHWVIHRDPPSFEEQKPAVEILETGIKVIDLLAPY 140 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ ++ + I + VGER RE + + L Sbjct: 141 AKGGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVL 200 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNS 273 +K+ +V +E P R T +T+AEYF + +VLL +D+I RF + E++ Sbjct: 201 EKTALVFGQMNEPPGSRMRVAETGLTMAEYFRDQEHRDVLLFIDNIFRFVQAGSEVSALL 260 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + G++T+V +V V D+ DP + + LD Sbjct: 261 GRMPSAVGYQPTLATEMGELQERIASTTS--GSVTSVQAVYVPADDLTDPAPATTFAHLD 318 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 VL+R + E+G YP VDPL S SR+ + +E ++ + ++ +++E +DI I Sbjct: 319 ATTVLSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYEVARRVQEILQKYKELQDIIAI 378 Query: 393 GG 394 G Sbjct: 379 LG 380 >gi|218900431|ref|YP_002448842.1| ATP synthase F1, beta subunit [Bacillus cereus G9842] gi|228903779|ref|ZP_04067896.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 4222] gi|228911144|ref|ZP_04074950.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 200] gi|226739977|sp|B7IQV8|ATPB_BACC2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|218541996|gb|ACK94390.1| ATP synthase F1, beta subunit [Bacillus cereus G9842] gi|228848507|gb|EEM93355.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 200] gi|228855868|gb|EEN00411.1| ATP synthase subunit beta [Bacillus thuringiensis IBL 4222] Length = 468 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D L D+ + + + PA +VE +TGI+V+D+ P Sbjct: 87 VTLGRVFNVLGDAIDLDGEL-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410 >gi|209915626|ref|NP_001119645.2| ATP synthase subunit beta, mitochondrial [Acyrthosiphon pisum] Length = 521 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 106/315 (33%), Positives = 165/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ PP + ++ TGI+V+ Sbjct: 126 IRIPVGAETLGRIINVIGEPIDERGPIDT-DKTAPIHAEAPPFVEMSVEQEILVTGIKVV 184 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 185 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 243 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 244 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 303 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ Sbjct: 304 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTSKGSITSVQAIYVPADDL 361 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D DE V+ + + Sbjct: 362 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNVIGDEHYNVARGVQKI 421 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 422 LQDYKSLQDIIAILG 436 >gi|259649496|dbj|BAI41658.1| F0F1-type ATP synthase subunit beta [Lactobacillus rhamnosus GG] Length = 519 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PID ++ G I P + + +TGI+VID+ P G Sbjct: 120 LGRVFNVLGDPIDDGEAFGPDHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 179 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E L+ + Sbjct: 180 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVLENT 239 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 240 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 299 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 300 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 357 Query: 337 VLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L R L E+G YP VDPL +S S L + + K+ + + ++ R+ E +DI Sbjct: 358 NLERRLTEQGIYPAVDPLESSSSALTPEIVGEEHYKVATEVQQVLQRYRELQDI 411 >gi|189426219|ref|YP_001953396.1| F0F1 ATP synthase subunit beta [Geobacter lovleyi SZ] gi|226740205|sp|B3EA01|ATPB_GEOLS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189422478|gb|ACD96876.1| ATP synthase F1, beta subunit [Geobacter lovleyi SZ] Length = 471 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 164/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D +G + I + P ++ + F TGI+V+D+ P G Sbjct: 92 LGRIMNVIGEPVDEMGPIGN-EKEYGIHREAPAFEDQSTKVEAFTTGIKVVDLLAPYARG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + + VGER RE + ++E L K+ Sbjct: 151 GKIGLFGGAGVGKTVLIMELINNIAKQHGGYSVFAGVGERTREGNDLWMEMKESGVLDKA 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LTA+++AEYF + +VLL +D+I RF + E++ G + Sbjct: 211 ALVYGQMNEPPGARARVALTALSVAEYFRDEENQDVLLFIDNIFRFTQAGSEVSALLGRI 270 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 271 PSAVGYQPTLATEMGELQERI--TSTKKGSITSVQAIYVPADDLTDPAPATAFAHLDATT 328 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D +E V+ S+ +++ ++++ +DI I G Sbjct: 329 VLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYAVARSVQYVLQKYKDLQDIIAILG 387 >gi|313899126|ref|ZP_07832651.1| ATP synthase F1, beta subunit [Clostridium sp. HGF2] gi|312956066|gb|EFR37709.1| ATP synthase F1, beta subunit [Clostridium sp. HGF2] Length = 466 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 164/308 (53%), Gaps = 9/308 (2%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ GR+ N LG+ IDG +G + ++ I + P +Q + +TGI+VI Sbjct: 79 IRVPVGKEILGRMFNVLGREIDGLGPVGTEN-TLPIHRQAPGFEEQQTSAEMLETGIKVI 137 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ + + +++ VGER RE + + Sbjct: 138 DLLCPYSKGGKIGLFGGAGVGKTVLIQELIHNIAKEHGGMSVVTGVGERTREGNDMYHEM 197 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIR 267 L K+V+V +ESP R LT +T+AEYF +VLL +D+I RF + Sbjct: 198 KDSGVLDKTVLVYGQMNESPGARMRVGLTGLTMAEYFRDHDHQDVLLFIDNIFRFTQAGS 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ +L ERI + + G+IT+V ++ V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKDGSITSVQAIYVPADDLTDPAPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R +A G YP VDPL S SR+ D +E ++ + ++ R++E Sbjct: 316 AFTHLDAKTVLDRDIAALGIYPAVDPLESSSRILDPLVVGEEHYEVARGVQTILQRYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 QDIIAILG 383 >gi|89574469|gb|ABD76365.1| putative ATP synthase beta subunit [Acyrthosiphon pisum] Length = 521 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 106/315 (33%), Positives = 165/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ PP + ++ TGI+V+ Sbjct: 126 IRIPVGAETLGRIINVIGEPIDERGPIDT-DKTAPIHAEAPPFVEMSVEQEILVTGIKVV 184 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 185 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 243 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 244 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 303 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ Sbjct: 304 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTSKGSITSVQAIYVPADDL 361 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D DE V+ + + Sbjct: 362 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNVIGDEHYNVARGVQKI 421 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 422 LQDYKSLQDIIAILG 436 >gi|54020006|ref|YP_115570.1| F0F1 ATP synthase subunit beta [Mycoplasma hyopneumoniae 232] gi|81823562|sp|Q601Z5|ATPB_MYCH2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|53987179|gb|AAV27380.1| ATP synthase beta chain [Mycoplasma hyopneumoniae 232] Length = 471 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 102/297 (34%), Positives = 159/297 (53%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LG+PIDG L + I + P + ++ + TGI+VID+ P G + Sbjct: 91 RMFNVLGQPIDGGKPL-DSFIKNPIHANAPTYLEQKATSEILVTGIKVIDLLIPFIKGGK 149 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ + +S+ VGER RE + + E L K+ + Sbjct: 150 IGLFGGAGVGKTVLVQELINNIASKHGGLSVFAGVGERSREGNDLYFEMKKAGVLDKTAL 209 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 210 VFGQMNEPPGARMRVALSALTMAEYFRDYENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 269 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 GY ++ +E+ +L ERI + +G+IT+V +V V D+ DP + S LD VL Sbjct: 270 TVGYQPTLSTEMGQLQERI--TSTIRGSITSVQAVYVPADDITDPAPATTFSHLDAKTVL 327 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPLAS SR + + LV+ + ++ RF+E +DI I G Sbjct: 328 DRGIAALGIYPAVDPLASSSRALEPNIVGKKHYLVAKKVVQILQRFKELQDIIAILG 384 >gi|315123709|ref|YP_004065713.1| ATP synthase subunit B [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315017431|gb|ADT65524.1| ATP synthase subunit B [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 465 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N G ID + + D I + PPA Q + F+TGI+V+D P Sbjct: 87 LGRIFNVTGDLIDEGEEI-SFDKKWAI-HRDPPAFEDQSTKSEIFETGIKVVDFLAPYAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G Sbjct: 205 VALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 265 IPSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDAT 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR++AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I G Sbjct: 323 TVLNRAIAEKGIYPAVDPLDSTSRMLDPNIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382 >gi|229917035|ref|YP_002885681.1| F0F1 ATP synthase subunit beta [Exiguobacterium sp. AT1b] gi|229468464|gb|ACQ70236.1| ATP synthase F1, beta subunit [Exiguobacterium sp. AT1b] Length = 472 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 158/301 (52%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG PID D + L I + P + +TGI+V+D+ P Sbjct: 93 ATLGRVFNVLGNPID-DKEVAADVLRAPIHRQAPTFDELSTKVEILETGIKVVDLLAPYI 151 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + +K Sbjct: 152 KGGKIGLFGGAGVGKTVLIQELINNIAQEHSGISVFAGVGERTREGNDLFHEMTDSGVIK 211 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 212 QTAMVFGQMNEPPGARLRVALTGLTMAEYFRDEQGQDVLLFVDNIFRFTQAGSEVSALLG 271 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 272 RMPSAVGYQPTLATEMGMLQERI--TSTAKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 329 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR L+ + + ++ ++ + R++E +DI I Sbjct: 330 TTNLERRLSEMGIYPAVDPLASTSRALSPEIVGKEHYEVARNVQQTLQRYKELQDIIAIL 389 Query: 394 G 394 G Sbjct: 390 G 390 >gi|239828585|ref|YP_002951209.1| F0F1 ATP synthase subunit beta [Geobacillus sp. WCH70] gi|259585446|sp|C5D990|ATPB_GEOSW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|239808878|gb|ACS25943.1| ATP synthase F1, beta subunit [Geobacillus sp. WCH70] Length = 473 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 108/331 (32%), Positives = 170/331 (51%), Gaps = 17/331 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+PID + D + + + P E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGEPIDMQGEI-PDDARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + G+IT++ ++ V D++ DP + S LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTATGSITSIQAIYVPADDYTDPAPATTFSHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R LAE G YP VDPLAS SR LA + + ++ + + R+ E +DI I Sbjct: 327 ATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYRELQDIIAI 386 Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ VH+ I FL Q+ Sbjct: 387 ----LGMDELSDEDKLIVHRARRIQFFLSQN 413 >gi|238925243|ref|YP_002938760.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656] gi|238876919|gb|ACR76626.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656] Length = 463 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 109/329 (33%), Positives = 171/329 (51%), Gaps = 20/329 (6%) Query: 102 CGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157 GR+ N LG+ IDG D+ K ++ E PP Q E+ +TGI+VID+ P Sbjct: 85 LGRLFNVLGEAIDGGAQPDTEEKWEIHRE-----PPTFEEQNPAEEILETGIKVIDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDN 213 G +IG+F G+G+GK+ L+ + + I + VGER RE + + E Sbjct: 140 YAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWTEMKESGV 199 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 L+K+ +V +E P R T +T+AEYF K NVLL +D+I RF + E++ Sbjct: 200 LEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEKHQNVLLFIDNIFRFTQAGSEVSAL 259 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + L Sbjct: 260 LGRMPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHL 317 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D VL+R + E+G YP VDPL S SR+ + +E ++ + ++ +++E +DI Sbjct: 318 DATTVLSRKIVEQGIYPAVDPLESTSRILEPDIVGEEHYQVARKVQEILQKYKELQDIIA 377 Query: 392 IGGYRPGVDLILDKA-VHQVPIIYDFLKQ 419 I G D DK V++ I FL Q Sbjct: 378 ILGMEELAD--EDKVLVYRARKIQKFLSQ 404 >gi|29377093|ref|NP_816247.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis V583] gi|227519707|ref|ZP_03949756.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis TX0104] gi|227554103|ref|ZP_03984150.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis HH22] gi|229545024|ref|ZP_04433749.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis TX1322] gi|229549268|ref|ZP_04437993.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis ATCC 29200] gi|255971980|ref|ZP_05422566.1| ATP synthase F1 [Enterococcus faecalis T1] gi|255975037|ref|ZP_05425623.1| ATP synthase F1 [Enterococcus faecalis T2] gi|256616880|ref|ZP_05473726.1| ATP synthase F1 [Enterococcus faecalis ATCC 4200] gi|256763246|ref|ZP_05503826.1| ATP synthase F1 [Enterococcus faecalis T3] gi|256853919|ref|ZP_05559284.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis T8] gi|256957847|ref|ZP_05562018.1| ATP synthase F1 [Enterococcus faecalis DS5] gi|256961154|ref|ZP_05565325.1| ATP synthase F1 [Enterococcus faecalis Merz96] gi|256963727|ref|ZP_05567898.1| ATP synthase F1 [Enterococcus faecalis HIP11704] gi|257079785|ref|ZP_05574146.1| ATP synthase F1 [Enterococcus faecalis JH1] gi|257081869|ref|ZP_05576230.1| ATP synthase F1 [Enterococcus faecalis E1Sol] gi|257084411|ref|ZP_05578772.1| ATP synthase F1 [Enterococcus faecalis Fly1] gi|257087590|ref|ZP_05581951.1| ATP synthase F1 [Enterococcus faecalis D6] gi|257090749|ref|ZP_05585110.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis CH188] gi|257416797|ref|ZP_05593791.1| ATP synthase F1 [Enterococcus faecalis AR01/DG] gi|257420013|ref|ZP_05597007.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis T11] gi|257421808|ref|ZP_05598798.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis X98] gi|293384100|ref|ZP_06629994.1| ATP synthase F1, beta subunit [Enterococcus faecalis R712] gi|293386915|ref|ZP_06631484.1| ATP synthase F1, beta subunit [Enterococcus faecalis S613] gi|294781392|ref|ZP_06746734.1| ATP synthase F1, beta subunit [Enterococcus faecalis PC1.1] gi|300860935|ref|ZP_07107022.1| ATP synthase F1, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|307270676|ref|ZP_07551967.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX4248] gi|307271674|ref|ZP_07552945.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0855] gi|307276856|ref|ZP_07557967.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX2134] gi|307285546|ref|ZP_07565685.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0860] gi|307287567|ref|ZP_07567610.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0109] gi|307290378|ref|ZP_07570293.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0411] gi|312899982|ref|ZP_07759300.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0470] gi|312902379|ref|ZP_07761585.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0635] gi|312907949|ref|ZP_07766932.1| ATP synthase F1, beta subunit [Enterococcus faecalis DAPTO 512] gi|312953639|ref|ZP_07772476.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0102] gi|312978523|ref|ZP_07790261.1| ATP synthase F1, beta subunit [Enterococcus faecalis DAPTO 516] gi|81436390|sp|Q831A5|ATPB_ENTFA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|29344559|gb|AAO82317.1| ATP synthase F1, beta subunit [Enterococcus faecalis V583] gi|227072795|gb|EEI10758.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis TX0104] gi|227176729|gb|EEI57701.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis HH22] gi|229305505|gb|EEN71501.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis ATCC 29200] gi|229309916|gb|EEN75903.1| H(+)-transporting two-sector ATPase [Enterococcus faecalis TX1322] gi|255962998|gb|EET95474.1| ATP synthase F1 [Enterococcus faecalis T1] gi|255967909|gb|EET98531.1| ATP synthase F1 [Enterococcus faecalis T2] gi|256596407|gb|EEU15583.1| ATP synthase F1 [Enterococcus faecalis ATCC 4200] gi|256684497|gb|EEU24192.1| ATP synthase F1 [Enterococcus faecalis T3] gi|256710862|gb|EEU25905.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis T8] gi|256948343|gb|EEU64975.1| ATP synthase F1 [Enterococcus faecalis DS5] gi|256951650|gb|EEU68282.1| ATP synthase F1 [Enterococcus faecalis Merz96] gi|256954223|gb|EEU70855.1| ATP synthase F1 [Enterococcus faecalis HIP11704] gi|256987815|gb|EEU75117.1| ATP synthase F1 [Enterococcus faecalis JH1] gi|256989899|gb|EEU77201.1| ATP synthase F1 [Enterococcus faecalis E1Sol] gi|256992441|gb|EEU79743.1| ATP synthase F1 [Enterococcus faecalis Fly1] gi|256995620|gb|EEU82922.1| ATP synthase F1 [Enterococcus faecalis D6] gi|256999561|gb|EEU86081.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis CH188] gi|257158625|gb|EEU88585.1| ATP synthase F1 [Enterococcus faecalis ARO1/DG] gi|257161841|gb|EEU91801.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis T11] gi|257163632|gb|EEU93592.1| F0F1 ATP synthase subunit beta [Enterococcus faecalis X98] gi|291078580|gb|EFE15944.1| ATP synthase F1, beta subunit [Enterococcus faecalis R712] gi|291083585|gb|EFE20548.1| ATP synthase F1, beta subunit [Enterococcus faecalis S613] gi|294451519|gb|EFG19979.1| ATP synthase F1, beta subunit [Enterococcus faecalis PC1.1] gi|295113588|emb|CBL32225.1| ATP synthase F1 subcomplex beta subunit [Enterococcus sp. 7L76] gi|300849974|gb|EFK77724.1| ATP synthase F1, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|306498571|gb|EFM68073.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0411] gi|306501305|gb|EFM70608.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0109] gi|306502770|gb|EFM72035.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0860] gi|306506493|gb|EFM75652.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX2134] gi|306511552|gb|EFM80551.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0855] gi|306512986|gb|EFM81627.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX4248] gi|310626040|gb|EFQ09323.1| ATP synthase F1, beta subunit [Enterococcus faecalis DAPTO 512] gi|310628477|gb|EFQ11760.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0102] gi|310634049|gb|EFQ17332.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0635] gi|311288672|gb|EFQ67228.1| ATP synthase F1, beta subunit [Enterococcus faecalis DAPTO 516] gi|311292978|gb|EFQ71534.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0470] gi|315025252|gb|EFT37184.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX2137] gi|315030335|gb|EFT42267.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX4000] gi|315032741|gb|EFT44673.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0017] gi|315035801|gb|EFT47733.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0027] gi|315143760|gb|EFT87776.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX2141] gi|315148583|gb|EFT92599.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX4244] gi|315150008|gb|EFT94024.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0012] gi|315151906|gb|EFT95922.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0031] gi|315155490|gb|EFT99506.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0043] gi|315159213|gb|EFU03230.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0312] gi|315162848|gb|EFU06865.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0645] gi|315164964|gb|EFU08981.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX1302] gi|315168599|gb|EFU12616.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX1341] gi|315170142|gb|EFU14159.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX1342] gi|315173359|gb|EFU17376.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX1346] gi|315576212|gb|EFU88403.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0309B] gi|315579211|gb|EFU91402.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0630] gi|315582928|gb|EFU95119.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX0309A] gi|323481544|gb|ADX80983.1| ATP synthase F1, beta subunit [Enterococcus faecalis 62] gi|327535839|gb|AEA94673.1| ATP synthase F1 sector beta subunit [Enterococcus faecalis OG1RF] Length = 468 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFPADAERSGIHKKAPAFDELSTSNEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATAFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S LA + + ++ + + H++ R+ E +DI I G Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEEHYEVATEVQHILQRYRELQDIIAILG 385 >gi|289449740|ref|YP_003475404.1| ATP synthase F1 subunit beta [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184287|gb|ADC90712.1| ATP synthase F1, beta subunit [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 466 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG IDG+ L I P ++ + +TGI+VID+ P G Sbjct: 88 GRMFNVLGNTIDGEGDLPPETPQSPIHRTAPGFAEQKPAAEILETGIKVIDLLEPYPKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNLK-KSV 218 +IG+F G+G+GK+ L+ + + + + VGER RE + + + K+ Sbjct: 148 KIGLFGGAGVGKTVLIQELIHNVAMEHGGYSVFTGVGERSREGNDLWNEMRESGVSDKTA 207 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +ESP +R L +T+AE+F +VLL +D+I RF + E++T G +P Sbjct: 208 LVFGQMNESPGVRMRVALAGLTMAEHFRDVDHKDVLLFIDNIFRFVQAGSEVSTLLGRMP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + G++T+V +V V D+ DP + + LD V Sbjct: 268 SAVGYQPTLAEEMGALQERI--TSTRDGSVTSVQAVYVPADDLTDPAPATTFTHLDATTV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +AE+G YP VDPLAS SR+ + A DE ++ + ++ +++E +DI I G Sbjct: 326 LSRQIAEQGIYPAVDPLASTSRILEPAVVGDEHYRVARKVQEILQKYKELQDIIAILG 383 >gi|254458956|ref|ZP_05072379.1| ATP synthase F1, beta subunit [Campylobacterales bacterium GD 1] gi|207084227|gb|EDZ61516.1| ATP synthase F1, beta subunit [Campylobacterales bacterium GD 1] Length = 469 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 160/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+ IDG + + + I PP +++ + F+TGI+V+D+ P G Sbjct: 92 GRIFNVIGETIDGGEQVTDSP-TWSIHRAPPPLVDQSTTTEMFETGIKVVDLLAPYSKGG 150 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ ++ + +S+ VGER RE + + N L K Sbjct: 151 KVGLFGGAGVGKTVIIMELIHNVAMGHDGLSVFAGVGERTREGNDLYHEMKDSNVLDKVA 210 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277 + E P R LT +T+AEYF + + +VL+ +D+I RFA S E++ G +P Sbjct: 211 LCYGQMSEPPGARNRIALTGLTMAEYFRDEMNLDVLMFVDNIFRFAQSGSEMSALLGRIP 270 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L +RI + + G+IT+V +V V D+ DP SV + LD V Sbjct: 271 SAVGYQPTLAREMGALQDRI--TSTKNGSITSVQAVYVPADDLTDPAPASVFAHLDATTV 328 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 LNR +AE+G YP VDPL S SRL D +E V+ + + ++++ +DI I G Sbjct: 329 LNRKIAEKGIYPAVDPLDSTSRLLDPQIIGEEHYSVARGVQQTLQKYKDLQDIIAILG 386 >gi|146318826|ref|YP_001198538.1| F0F1 ATP synthase subunit beta [Streptococcus suis 05ZYH33] gi|146321035|ref|YP_001200746.1| F0F1 ATP synthase subunit beta [Streptococcus suis 98HAH33] gi|145689632|gb|ABP90138.1| F0F1-type ATP synthase, beta subunit [Streptococcus suis 05ZYH33] gi|145691841|gb|ABP92346.1| F0F1-type ATP synthase, beta subunit [Streptococcus suis 98HAH33] gi|292558487|gb|ADE31488.1| ATP synthase F1, beta subunit [Streptococcus suis GZ1] Length = 481 Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG ID ++S D E + K PA + +TGI+VID+ P Sbjct: 102 LGRVFNVLGDTIDLEESF-PADFEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 160 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K Sbjct: 161 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 220 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 221 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 280 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 281 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 338 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + ++ R++E +DI I G Sbjct: 339 TNLERKLTQLGIYPAVDPLASSSRALAPQIVGEEHYAVAMEVKRVLQRYQELQDIIAILG 398 >gi|313885528|ref|ZP_07819278.1| ATP synthase F1, beta subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312619258|gb|EFR30697.1| ATP synthase F1, beta subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 457 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID +G I ++ P ++Q + F+TGI+VID+ P G Sbjct: 85 GRMFNVLGNVIDEMPFEEEGQRE-PIHNEAPAFADQQTSTQIFETGIKVIDLLCPYPQGG 143 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ + ++ +++ VGER RE + + E L ++V Sbjct: 144 KIGLFGGAGVGKTVLMQELIHNTAIEQGGLSVVAGVGERTREGNDLYYEMKEAGVLDQTV 203 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF K NVLL +D+I RF + E++ G +P Sbjct: 204 LVYGQMDEPPGARMRVALSALTMAEYFRDKKKQNVLLFIDNIFRFIQAGSEVSALLGRMP 263 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ +L ERI + + G IT++ ++ V D+ DP A S LD V Sbjct: 264 SAVGYQPTLANEMGQLQERI--TSTQDGAITSIQAIFVPADDLTDPAAAIAFSHLDARTV 321 Query: 338 LNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S S L++ + + + ++ R+ E +DI I G Sbjct: 322 LSRQIASLGIYPAVDPLESTSSLLSEDIVGVEHADVAHRVQQILQRYNELQDIIAILG 379 >gi|148927462|ref|ZP_01810965.1| ATP synthase F1, beta subunit [candidate division TM7 genomosp. GTL1] gi|147887186|gb|EDK72653.1| ATP synthase F1, beta subunit [candidate division TM7 genomosp. GTL1] Length = 460 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 12/299 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR+ N +G+PIDG ++ K + + + K PPA Q + +TGI+VID+ P+ G Sbjct: 91 GRMFNVVGEPIDGK-AISK-NAHVAPIHKEPPAFTDQSGKTEILETGIKVIDLIAPIAKG 148 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L+ S A+ V VGER RE + E+ L K Sbjct: 149 GKVGLFGGAGVGKTVLIQELISNIAKFHSGSSVFAG-VGERTREGNDLYEEMXASGVLDK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 + +V +E P R L+ + +AE F +G +VLL +D+I RF + E++ G L Sbjct: 208 TSLVFGQMNEPPGARLRVALSGLAMAEAFRDEGKDVLLFIDNIFRFTQAGSEVSALLGRL 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + +KG++T+V +V V D+ DP + + LD I Sbjct: 268 PSAVGYQPNLQQEMGALQERI--TSTKKGSVTSVQAVYVPADDLTDPAPATTFAHLDSTI 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR+L E G YP VDPL S S + D E ++ + ++ +++E +DI I G Sbjct: 326 VLNRALTEIGIYPAVDPLDSSSTILDAEIVGQEHYEVAREVQRVLQQYKELQDIIAILG 384 >gi|320102102|ref|YP_004177693.1| ATP synthase F1 subcomplex subunit beta [Isosphaera pallida ATCC 43644] gi|319749384|gb|ADV61144.1| ATP synthase F1 subcomplex beta subunit [Isosphaera pallida ATCC 43644] Length = 479 Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 117/336 (34%), Positives = 172/336 (51%), Gaps = 29/336 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LG PIDG + + I P + F+TGI+VID+ TP G Sbjct: 94 GRVFNLLGDPIDGRGPVNVSE-RWRIHRHAPDFDKLSPKTEVFETGIKVIDLLTPFVRGG 152 Query: 163 RIGVFAGSGIGKSTLLS-MFARSDCFDKV-----IISLVGERGREVR----EFIEDYLGD 212 +IG+F G+G+GK+ +L + AR KV + + VGER RE E E +G Sbjct: 153 KIGLFGGAGLGKTVILQELIAR---IAKVHSGFSVFAGVGERTREGNDLWLEMQETKIGA 209 Query: 213 NLKK----SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 K +V+ +E P R L+A+T AE+F S G +VLL +D+I RF+ + Sbjct: 210 TGKSVIDSTVMYFGQMNEPPGARLRVALSALTSAEWFRDSTGADVLLFIDNIFRFSQAGS 269 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P GY ++ +E+ L ERI + G IT+V +V V D+ DP + Sbjct: 270 EVSALLGRMPSNVGYQPTLATEMGALQERI--TSTVNGAITSVQAVYVPADDLTDPAPAT 327 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 LD IVL RS+AE+G YP +DPL S SR+ D + +E ++ + ++ R+ E Sbjct: 328 TFGFLDAFIVLQRSIAEKGIYPAIDPLGSSSRILDPQYVGEEHYEVARRVQSILQRYREL 387 Query: 387 RDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419 RDI I GVD + + + VH+ I FL Q Sbjct: 388 RDIIAI----LGVDELSEEDKQIVHRARRIERFLSQ 419 >gi|291524473|emb|CBK90060.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale DSM 17629] gi|291527484|emb|CBK93070.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale M104/1] Length = 463 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 109/329 (33%), Positives = 171/329 (51%), Gaps = 20/329 (6%) Query: 102 CGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157 GR+ N LG+ IDG D+ K ++ E PP Q E+ +TGI+VID+ P Sbjct: 85 LGRLFNVLGEAIDGGAQPDTEEKWEIHRE-----PPTFEEQNPAEEILETGIKVIDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDN 213 G +IG+F G+G+GK+ L+ + + I + VGER RE + + E Sbjct: 140 YAKGGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWTEMKESGV 199 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 L+K+ +V +E P R T +T+AEYF K NVLL +D+I RF + E++ Sbjct: 200 LEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEKHQNVLLFIDNIFRFTQAGSEVSAL 259 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + L Sbjct: 260 LGRMPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHL 317 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D VL+R + E+G YP VDPL S SR+ + +E ++ + ++ +++E +DI Sbjct: 318 DATTVLSRKIVEQGIYPAVDPLESTSRILEPDIVGEEHYQVARKVQEILQKYKELQDIIA 377 Query: 392 IGGYRPGVDLILDKA-VHQVPIIYDFLKQ 419 I G D DK V++ I FL Q Sbjct: 378 ILGMEELAD--EDKVLVYRARKIQKFLSQ 404 >gi|254300966|ref|ZP_04968410.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e] gi|157811305|gb|EDO88475.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e] Length = 544 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G P D +L I PP ++ F TGI+ Sbjct: 102 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 161 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205 VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE E Sbjct: 162 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 219 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF Sbjct: 220 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP Sbjct: 280 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 338 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 397 Query: 383 FEETRDI 389 + E +D+ Sbjct: 398 YRELQDV 404 >gi|126442704|ref|YP_001063786.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 668] gi|190358220|sp|A3NN65|ATPB2_BURP6 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|126222195|gb|ABN85700.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 668] Length = 534 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G P D +L I PP ++ F TGI+ Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 167 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205 VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE E Sbjct: 168 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 225 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF Sbjct: 226 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 285 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP Sbjct: 286 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 343 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 344 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 403 Query: 383 FEETRDI 389 + E +D+ Sbjct: 404 YRELQDV 410 >gi|260466814|ref|ZP_05812999.1| ATP synthase F1, beta subunit [Mesorhizobium opportunistum WSM2075] gi|259029426|gb|EEW30717.1| ATP synthase F1, beta subunit [Mesorhizobium opportunistum WSM2075] Length = 524 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 160/308 (51%), Gaps = 19/308 (6%) Query: 101 WCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR+IN +G+P+D G D + M + + P Q E TGI+V+D+ P Sbjct: 136 MLGRIINVIGEPVD---EAGPVDAIEMRSIHQPAPTYVEQSTEAQILITGIKVLDLLAPY 192 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L+ + + + VGER RE EFIE + Sbjct: 193 AKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGERTREGNDLYHEFIESGVN 252 Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 G K+ +V +E P R LT +T+AEYF +G +VL +D+I RF + Sbjct: 253 KKGGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGS 312 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + Sbjct: 313 EVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPAT 370 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD LNR++AE+G YP VDPL S SR+ D +E V+ + ++ R++ Sbjct: 371 SFAHLDATTTLNRAIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYGVARQVQSILQRYKSL 430 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 431 QDIIAILG 438 >gi|160938925|ref|ZP_02086276.1| hypothetical protein CLOBOL_03819 [Clostridium bolteae ATCC BAA-613] gi|158437888|gb|EDP15648.1| hypothetical protein CLOBOL_03819 [Clostridium bolteae ATCC BAA-613] Length = 466 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ IDG +SL D ++ + PP+ Q V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGETIDGGESLEGED--KWVIHRDPPSFEDQSPVVEMLETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + I + VGER RE + + E L+K+ Sbjct: 144 GKIGLFGGAGVGKTVLIQELITNIATEHGGYSIFTGVGERSREGNDLWTEMRESGVLEKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G + Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFRDVEHQNVLLFIDNIFRFVQAGSEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLATEVGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ ++ E ++ + + ++ +++E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLESTSRILEEDVVGKEHYEVANKVQQMLQKYKELQDIIAILG 380 >gi|170017975|ref|YP_001728894.1| ATP synthase F1, beta subunit [Leuconostoc citreum KM20] gi|226740651|sp|B1MW85|ATPB_LEUCK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|169804832|gb|ACA83450.1| ATP synthase F1, beta subunit [Leuconostoc citreum KM20] Length = 466 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 154/296 (52%), Gaps = 8/296 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+P+D + + I P + + +TGI+VID+ P Sbjct: 85 ATLGRVFNVLGEPVDNNGEIAAETPRHSIHRDAPSYDDLANSTEILETGIKVIDLLAPYV 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + LK Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMAESGVLK 204 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ +V +E P R LT +T+AE F S+G +VLL +D+I RF + E++ G Sbjct: 205 QTAMVYGQMNEPPGARMRVALTGLTMAENFRDSEGKDVLLFIDNIFRFTQAGSEVSALLG 264 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L R+L ++G YP VDPLAS S D E ++ + + + R+ E +DI Sbjct: 323 TTNLERALTQQGIYPAVDPLASTSSALDPQVVGQEHYEVATEVQRTLQRYRELQDI 378 >gi|299136422|ref|ZP_07029605.1| ATP synthase F1, beta subunit [Acidobacterium sp. MP5ACTX8] gi|298600937|gb|EFI57092.1| ATP synthase F1, beta subunit [Acidobacterium sp. MP5ACTX8] Length = 480 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 163/308 (52%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV+N LG+P+D LG M I + P + E+ F+TGI+V+D+ P Sbjct: 93 LGRVLNVLGEPVD---ELGPVNAKTHMPIHRQAPAFDEQSTSEEMFETGIKVVDLILPFL 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGD 212 G +IG+F G+G+GK+ ++ + + + VGER RE EF E + D Sbjct: 150 KGGKIGLFGGAGVGKTVVIQELINNVAMKHGGFSVFAGVGERTREGNDLWHEFQESGVID 209 Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N K+ ++ E P R LT +T+AEYF +G + LL +D+I RF + Sbjct: 210 VHDFNKSKAALIYGQMTEPPGARLRVALTGLTVAEYFRDVEGADTLLFIDNIFRFTQAGS 269 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++T G +P A GY ++ +E+ L ERI + +KG++T+V +V V D+ DP + Sbjct: 270 EVSTLLGRMPSAVGYQPNLATEMGELQERI--TSTKKGSVTSVQAVYVPADDITDPAPAT 327 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD ++L+R L+E G YP VDPL S SR L+ + + + + ++ R+++ Sbjct: 328 TFAHLDATMLLSRPLSELGIYPAVDPLTSTSRVLSARVVGQEHYDVAQGVKRILQRYKDL 387 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 388 QDIIAILG 395 >gi|332980984|ref|YP_004462425.1| ATP synthase F1 subcomplex subunit beta [Mahella australiensis 50-1 BON] gi|332698662|gb|AEE95603.1| ATP synthase F1 subcomplex beta subunit [Mahella australiensis 50-1 BON] Length = 472 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PID + D M I + P +Q V + F+TGI+V+D+ P G Sbjct: 91 LGRLFNVLGQPIDDSGDVEATDY-MPIHREAPAFSEQQPVSQVFETGIKVVDLLAPYPRG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + I + VGER RE E + L K+ Sbjct: 150 GKIGLFGGAGVGKTVLIMELIHNIATEHGGFSIFTGVGERTREGNELWNEMKESGVLDKT 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF + +VL+ +D+I R+ + E++ G + Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEHQDVLMFIDNIFRYVQAGSEVSALLGRM 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ ++ L ERI + + G+IT+V +V V D+ DP ++ + LD Sbjct: 270 PSAVGYQPTLAQDVGSLEERI--TSTKSGSITSVQAVYVPADDLTDPAPAAIFAHLDAMT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E G YP VDPL+S SR+ D +E + ++ R++E +DI I G Sbjct: 328 VLSRDIVEMGIYPAVDPLSSTSRILDARILGEEHYNTARHVQEILERYKELQDIIAILG 386 >gi|134278178|ref|ZP_01764892.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305] gi|134249962|gb|EBA50042.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305] Length = 536 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G P D +L I PP ++ F TGI+ Sbjct: 102 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 161 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205 VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE E Sbjct: 162 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 219 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF Sbjct: 220 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP Sbjct: 280 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 338 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 397 Query: 383 FEETRDI 389 + E +D+ Sbjct: 398 YRELQDV 404 >gi|70725933|ref|YP_252847.1| F0F1 ATP synthase subunit beta [Staphylococcus haemolyticus JCSC1435] gi|118573757|sp|Q4L7Y4|ATPB_STAHJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|68446657|dbj|BAE04241.1| ATP synthase beta chain [Staphylococcus haemolyticus JCSC1435] Length = 470 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 101/302 (33%), Positives = 161/302 (53%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG ID +D L G + + + + P + E + +TGI+V+D+ P Sbjct: 87 VTLGRVFNVLGDTIDLEDKL-DGSVRRDPIHRQSPNFDELSTEVEILETGIKVVDLLAPY 145 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E + Sbjct: 146 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMRDSGVI 205 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R L+A+T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 KKTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 265 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLD 323 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR + A E ++ + + ++ E +DI I Sbjct: 324 ATTNLERKLTEMGIYPAVDPLASTSRALEPAIVGQEHYEVARDVQSTLQKYRELQDIIAI 383 Query: 393 GG 394 G Sbjct: 384 LG 385 >gi|116750008|ref|YP_846695.1| F0F1 ATP synthase subunit beta [Syntrophobacter fumaroxidans MPOB] gi|166222421|sp|A0LLF8|ATPB_SYNFM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116699072|gb|ABK18260.1| ATP synthase F1, beta subunit [Syntrophobacter fumaroxidans MPOB] Length = 469 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/303 (33%), Positives = 157/303 (51%), Gaps = 9/303 (2%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 A GRVIN +G+ +DG + D M I P + K +TG++VID+ P Sbjct: 86 GAAVLGRVINVVGRTVDGLGPVNT-DTYMPIHRTAPAFTEQDTSVKVLETGVKVIDLLVP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ ++ + IS+ VGER RE + + Sbjct: 145 FPRGGKMGMFGGAGVGKTVVMMEMIHNIAMQHGGISVFAGVGERTREGNDLYHEMKDSGV 204 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272 L ++ +V E P R L+A+T+AEYF +G +VLL +D+I RF + E++ Sbjct: 205 LPRAGLVYGQMTEPPGARARVALSALTVAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSAL 264 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ ++L L ERI + KG+IT+V V V D+ DP + + L Sbjct: 265 LGRMPSAVGYQPTLGTDLGELQERI--TSTTKGSITSVQCVYVPADDLTDPAPATTFAHL 322 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391 DG +VL+R +AE G YP VDPL S SR+ D D + ++ ++++ +DI Sbjct: 323 DGTVVLSRQIAELGIYPAVDPLDSTSRILDPNVLGEDHYYTAREVQQILQKYKDLQDIIA 382 Query: 392 IGG 394 I G Sbjct: 383 ILG 385 >gi|167923972|ref|ZP_02511063.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei BCC215] Length = 417 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 154/295 (52%), Gaps = 12/295 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ G P D +L I PP ++ F TGI+VID+ PL G Sbjct: 3 GRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGG 62 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 + +F G+G+GK+ L+ +M R + + +GER RE E + D G L + Sbjct: 63 KAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGR 120 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +E P R PLTA+ IAEYF + NVLL++D++ RF + E++ G Sbjct: 121 TVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGR 180 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP ++ + +D Sbjct: 181 LPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSM 238 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 +VL+R++A EG YP +DP+AS S L D + V+ + +I + E +D+ Sbjct: 239 VVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 293 >gi|225619150|ref|YP_002720376.1| F0F1 ATP synthase subunit beta [Brachyspira hyodysenteriae WA1] gi|225213969|gb|ACN82703.1| F0F1 ATP synthase subunit beta [Brachyspira hyodysenteriae WA1] Length = 470 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 105/321 (32%), Positives = 169/321 (52%), Gaps = 10/321 (3%) Query: 81 ISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 IS GD +F G + P GR+ N LG+ +D + + + I + P N + Sbjct: 70 ISRGDDIFDTGNHIMVPVGTETIGRIFNVLGQTVDKGEPIVAKEYR-SIHASPPKFENLE 128 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVG 196 + F+TGI+VID+ P G + G+F G+G+GK+ L+ S+ + + VG Sbjct: 129 PKLEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELIHNIASEHGGYSVFAGVG 188 Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 ER RE + + + K+ +V +E P R L+A+T+AEYF S G +VLL Sbjct: 189 ERTREGNDLWSEMKESGVINKTCLVYGQMNEPPGARLRVALSALTMAEYFRDSAGLDVLL 248 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V Sbjct: 249 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKNGSITSIQAVY 306 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R ++E+G YP VDPLAS SR+ D E V+ Sbjct: 307 VPADDLTDPAPATAFTHLDATTVLSREVSEKGIYPAVDPLASTSRILDPNILGQEHYDVA 366 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + H++ R+ + +DI I G Sbjct: 367 RKVQHILQRYRDLQDIIAILG 387 >gi|198284879|ref|YP_002221200.1| ATP synthase F1 subunit beta [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665303|ref|YP_002427559.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|198249400|gb|ACH84993.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218517516|gb|ACK78102.1| ATP synthase F1, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 469 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N LG+P+DG + D + + + PA + + +TGI+VID+ P Sbjct: 89 ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 146 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L+ R+ + + + VGER RE +F + L Sbjct: 147 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 206 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R A LT +T+AE+F +G ++L+ +D+I R+ + E++ G Sbjct: 207 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 267 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP +DPL S SR D E V+ S + R++E +DI I Sbjct: 325 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|190358296|sp|Q63IW3|ATPB2_BURPS RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 Length = 538 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G P D +L I PP ++ F TGI+ Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 167 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205 VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE E Sbjct: 168 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 225 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF Sbjct: 226 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 285 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP Sbjct: 286 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 343 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 344 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 403 Query: 383 FEETRDI 389 + E +D+ Sbjct: 404 YRELQDV 410 >gi|728923|sp|P41168|ATPB_THIFE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|154674|gb|AAA53127.1| F1F0-ATPase beta subunit [Acidithiobacillus ferrooxidans] Length = 468 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N LG+P+DG + D + + + PA + + +TGI+VID+ P Sbjct: 88 ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 145 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L+ R+ + + + VGER RE +F + L Sbjct: 146 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 205 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R A LT +T+AE+F +G ++L+ +D+I R+ + E++ G Sbjct: 206 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYPLAGTEVSALLG 265 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 266 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 323 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP +DPL S SR D E V+ S + R++E +DI I Sbjct: 324 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 383 Query: 394 G 394 G Sbjct: 384 G 384 >gi|152977492|ref|YP_001377009.1| F0F1 ATP synthase subunit beta [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|189081327|sp|A7GV56|ATPB_BACCN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|152026244|gb|ABS24014.1| ATP synthase F1, beta subunit [Bacillus cytotoxicus NVH 391-98] Length = 464 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 179/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG+ ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 83 ATLGRVFNVLGEAIDLDGEI-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 140 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 141 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 199 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 200 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 259 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 260 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 317 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 318 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 377 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 378 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 406 >gi|315641266|ref|ZP_07896343.1| ATP synthase F1 sector beta subunit [Enterococcus italicus DSM 15952] gi|315483033|gb|EFU73552.1| ATP synthase F1 sector beta subunit [Enterococcus italicus DSM 15952] Length = 468 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID + K I P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGETIDLQEPFPKDAQRSGIHKPAPNFDELSTSTEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYNEMRESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S LA + ++ + + H + R+ E +DI I G Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEQHYQVATEVQHTLQRYRELQDIIAILG 385 >gi|297585419|ref|YP_003701199.1| ATP synthase F1 subunit beta [Bacillus selenitireducens MLS10] gi|297143876|gb|ADI00634.1| ATP synthase F1, beta subunit [Bacillus selenitireducens MLS10] Length = 472 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID + + +G+ I + P + + +TGI+V+D+ P G Sbjct: 92 LGRVFNVLGQEIDLQEPIPEGERRDPIHRQAPAYDDLSTNTEILETGIKVVDLLAPYVKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E + K+ Sbjct: 152 GKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVITKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ G + Sbjct: 212 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEKGADVLLFIDNIFRFTQAGMEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 272 PSAVGYQPTLSTEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L R L+E G YP VDPLAS SR DE V+ + + +++E +DI I G Sbjct: 330 NLERKLSEMGIYPAVDPLASTSRALSPEIVGDEHYSVAREVQETLQKYKELQDIIAILG 388 >gi|308238029|emb|CBK55605.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans] Length = 419 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N LG+P+DG + D + + + PA + + +TGI+VID+ P Sbjct: 64 ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L+ R+ + + + VGER RE +F + L Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R A LT +T+AE+F +G ++L+ +D+I R+ + E++ G Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP +DPL S SR D E V+ S + R++E +DI I Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359 Query: 394 G 394 G Sbjct: 360 G 360 >gi|308238027|emb|CBK55604.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans] gi|308238037|emb|CBK55609.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans] Length = 421 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N LG+P+DG + D + + + PA + + +TGI+VID+ P Sbjct: 64 ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L+ R+ + + + VGER RE +F + L Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R A LT +T+AE+F +G ++L+ +D+I R+ + E++ G Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP +DPL S SR D E V+ S + R++E +DI I Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359 Query: 394 G 394 G Sbjct: 360 G 360 >gi|319790625|ref|YP_004152258.1| ATP synthase F1, beta subunit [Thermovibrio ammonificans HB-1] gi|317115127|gb|ADU97617.1| ATP synthase F1, beta subunit [Thermovibrio ammonificans HB-1] Length = 481 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 162/302 (53%), Gaps = 17/302 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N +GKPIDG KG + E I PP ++ V + F+TGI+VID+ P Sbjct: 98 GRIFNVVGKPIDG-----KGPVEAEEYWPIHRPAPPLTEQKTVAEVFETGIKVIDLLEPY 152 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNL 214 G + G+F G+G+GK+ LL + + + VGER RE + ++E L Sbjct: 153 AKGGKTGLFGGAGVGKTVLLMELIHNVAMKHGGFSVFAGVGERTREGTDLWLEMQESGVL 212 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 + +V+V +E P R +T VT+AEYF +G +++ +D++ RF + E++ Sbjct: 213 ENTVLVYGQMNEPPGNRWRVAMTGVTMAEYFRDVEGRDMMFFVDNMFRFIQAGAEVSALL 272 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P GY ++ +E+ + ERI + KG+IT+V ++ V D+ DP ++ + LD Sbjct: 273 GRIPSEVGYQPTLATEVGAIQERI--TSTTKGSITSVQAIYVPADDFTDPAPFTLFAHLD 330 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 VL+R+LAE+G YP VDPL S SR+ D + ++ + + R++E +I I Sbjct: 331 ATTVLSRALAEQGIYPAVDPLESTSRMLDPHIVGERHYRVAREVQRYLQRYKELLEIIAI 390 Query: 393 GG 394 G Sbjct: 391 LG 392 >gi|91780119|ref|YP_555326.1| F0F1 ATP synthase subunit beta [Burkholderia xenovorans LB400] gi|123357676|sp|Q13IW3|ATPB3_BURXL RecName: Full=ATP synthase subunit beta 3; AltName: Full=ATP synthase F1 sector subunit beta 3; AltName: Full=F-ATPase subunit beta 3 gi|91692779|gb|ABE35976.1| ATP synthase F1, beta subunit [Burkholderia xenovorans LB400] Length = 493 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 160/310 (51%), Gaps = 13/310 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+I+ G P D L G I K PP ++ + F TGI+VID+ TPL Sbjct: 102 AMLGRLIDVSGVPGDNGTPLPPGTPRRPIHRKPPPLASQGAETRIFATGIKVIDLLTPLA 161 Query: 160 HGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G + +F G+G+GK+ L+ +M R + + VGER RE E + D Sbjct: 162 QGGKAAMFGGAGVGKTVLVMELIHAMVERYQGIS--VFAGVGERCREGHEMLTDMRHSGV 219 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 L ++V+V +E P R PLTA+T+AEYF + NVLL++D++ RF + E++ Sbjct: 220 LPRTVLVYGQMNEPPGARWRVPLTALTVAEYFRDERHQNVLLLMDNVFRFVQAGAEVSGL 279 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G LP GY ++ +E+ L ERI ++TA+ +V V D+ DP ++ + + Sbjct: 280 LGRLPSRVGYQPTLATEVAGLQERI--VSVGDVSVTAIEAVYVPADDFTDPAVTAIAAHV 337 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRD-IR 390 D +VL+RS+A EG YP +DP+AS S L D + ++ + + + E +D I Sbjct: 338 DSMVVLSRSMAAEGMYPAIDPIASSSVLLDPLVVGGEHARIAIEVRRAVEHYRELQDVIS 397 Query: 391 LIGGYRPGVD 400 L+G G D Sbjct: 398 LLGVEELGAD 407 >gi|226226122|ref|YP_002760228.1| ATP synthase beta chain [Gemmatimonas aurantiaca T-27] gi|226089313|dbj|BAH37758.1| ATP synthase beta chain [Gemmatimonas aurantiaca T-27] Length = 476 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 97/302 (32%), Positives = 159/302 (52%), Gaps = 8/302 (2%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR++N LG+P+D + I K P +N + + F+TGI+V+D+ P Sbjct: 94 APALGRILNVLGEPVDDGAPIPATAERWPIHRKRPDFVNLEPKTEVFETGIKVVDLVAPF 153 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ ++ + K + VGER RE + ++E L Sbjct: 154 VKGGKIGLFGGAGVGKTVIIQELINNVAKGHGGKSVFCGVGERTREGNDLYLEFQEAGIL 213 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNS 273 K ++ +E P R L +T+AEYF + + +VL+ +D+I RF + E++ Sbjct: 214 DKVALIYGQMNEPPGARLRVALAGLTVAEYFRDQENADVLVFVDNIFRFTQAGSEVSALL 273 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + G+IT+V ++ V D+ DP + + LD Sbjct: 274 GRMPSAVGYQPTLATEMGELQERI--TSTRNGSITSVQAIYVPADDLTDPAPATAFAHLD 331 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIRLI 392 + LNR + E G YP VDPL S SR+ D + D V++ T ++ R++E +DI I Sbjct: 332 ATVTLNRKITELGIYPAVDPLDSGSRILDAQYVGDRHYNVATQTKQILQRYKELQDIIAI 391 Query: 393 GG 394 G Sbjct: 392 LG 393 >gi|296876800|ref|ZP_06900848.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis ATCC 15912] gi|296432302|gb|EFH18101.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis ATCC 15912] Length = 468 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D + I K P E+ +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDQPFAEDAPRDSIHKKAPSFDELSTSEEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V+S + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVASEVKRVLQRYHELQDIIAILG 385 >gi|237508230|ref|ZP_04520945.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346] gi|235000435|gb|EEP49859.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346] Length = 538 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G P D +L I PP ++ F TGI+ Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 167 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205 VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE E Sbjct: 168 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 225 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF Sbjct: 226 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 285 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP Sbjct: 286 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 343 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 344 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 403 Query: 383 FEETRDI 389 + E +D+ Sbjct: 404 YRELQDV 410 >gi|167628982|ref|YP_001679481.1| ATP synthase f1, beta subunit [Heliobacterium modesticaldum Ice1] gi|254808154|sp|B0THN2|ATPB_HELMI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|167591722|gb|ABZ83470.1| ATP synthase f1, beta subunit [Heliobacterium modesticaldum Ice1] Length = 471 Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 161/302 (53%), Gaps = 9/302 (2%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+ N LG PID + ++ I K P N + + +TGI+VID+ P Sbjct: 91 AEILGRMFNVLGDPIDEAGQVAAKEV-WPIHRKAPTFENLEPSTEVLETGIKVIDLLAPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNLK 215 G ++G+F G+G+GK+ L+ + + + + VGER RE + ++ + Sbjct: 150 AKGGKVGLFGGAGVGKTVLIQELINNIAMEYSGYSVFAGVGERTREGNDLYNEFKESGIL 209 Query: 216 KSVVVV-ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K+V +V +E P R L+ + +AEYF + +VLL +D+I RF + E++ Sbjct: 210 KNVAMVFGQMNEPPGARMRVALSGLVMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSALL 269 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + + G+IT+V ++ V D+ DP + + LD Sbjct: 270 GRMPSAVGYQPTLSTEMGQLQERI--TSTKNGSITSVQAIYVPADDLTDPAPATAFAHLD 327 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 VL+R++AE G YP VDPL S SR+ D DE V+ + ++ R++E +DI I Sbjct: 328 ATTVLSRAIAELGIYPAVDPLDSTSRILDPHVVGDEHYSVARGVQKILQRYKELQDIIAI 387 Query: 393 GG 394 G Sbjct: 388 LG 389 >gi|312867283|ref|ZP_07727493.1| ATP synthase F1, beta subunit [Streptococcus parasanguinis F0405] gi|322389187|ref|ZP_08062748.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis ATCC 903] gi|311097412|gb|EFQ55646.1| ATP synthase F1, beta subunit [Streptococcus parasanguinis F0405] gi|321144092|gb|EFX39509.1| ATP synthase F1 sector beta subunit [Streptococcus parasanguinis ATCC 903] Length = 468 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D + I K P E+ +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDQPFAEDAPRDSIHKKAPSFDELSTSEEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + + S + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVASEVKRVLQRYHELQDIIAILG 385 >gi|308238031|emb|CBK55606.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans] Length = 419 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N LG+P+DG + D + + + PA + + +TGI+VID+ P Sbjct: 64 ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L+ R+ + + + VGER RE +F + L Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R A LT +T+AE+F +G ++L+ +D+I R+ + E++ G Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP +DPL S SR D E V+ S + R++E +DI I Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359 Query: 394 G 394 G Sbjct: 360 G 360 >gi|308238142|emb|CBK55610.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans] Length = 420 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N LG+P+DG + D + + + PA + + +TGI+VID+ P Sbjct: 64 ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L+ R+ + + + VGER RE +F + L Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R A LT +T+AE+F +G ++L+ +D+I R+ + E++ G Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP +DPL S SR D E V+ S + R++E +DI I Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359 Query: 394 G 394 G Sbjct: 360 G 360 >gi|308238035|emb|CBK55608.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans] gi|308238041|emb|CBK55611.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans] Length = 419 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N LG+P+DG + D + + + PA + + +TGI+VID+ P Sbjct: 64 ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L+ R+ + + + VGER RE +F + L Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R A LT +T+AE+F +G ++L+ +D+I R+ + E++ G Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP +DPL S SR D E V+ S + R++E +DI I Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359 Query: 394 G 394 G Sbjct: 360 G 360 >gi|15828737|ref|NP_326097.1| F0F1 ATP synthase subunit beta [Mycoplasma pulmonis UAB CTIP] gi|81855822|sp|Q98QU5|ATPB1_MYCPU RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|14089679|emb|CAC13439.1| ATP SYNTHASE BETA CHAIN [Mycoplasma pulmonis] Length = 475 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 99/297 (33%), Positives = 158/297 (53%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LG+ ID + + I + P + + +TGI+VID+ P G + Sbjct: 90 RMFNVLGQTIDNKGEIEAKEFR-SIHASAPSYEEQNDSSEILETGIKVIDLLVPYSKGGK 148 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVV 219 IG+F G+G+GK+ L+ + +S+ VGER RE + + + L K+ + Sbjct: 149 IGLFGGAGVGKTVLVQELINNIATQHGGLSVFAGVGERTREGNDLYHEMIASGVLDKTTL 208 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G +P Sbjct: 209 VFGQMNEPPGARMRVALTGLTMAEYFRDKFKQDVLLFIDNIFRFTQAGSEVSALLGRMPS 268 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ +L ERI + + G+IT+V +V V D+ DP + + LD VL Sbjct: 269 AVGYQPTLATEMGQLQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 326 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 R++A G YP +DPLAS SR+ D +E LV+ + +++ RF+E +DI I G Sbjct: 327 ERNIAALGIYPAIDPLASSSRMLDPLIIGNEHYLVALEVQNILQRFKELQDIIAILG 383 >gi|308238043|emb|CBK55612.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans] Length = 424 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N LG+P+DG + D + + + PA + + +TGI+VID+ P Sbjct: 64 ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L+ R+ + + + VGER RE +F + L Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R A LT +T+AE+F +G ++L+ +D+I R+ + E++ G Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP +DPL S SR D E V+ S + R++E +DI I Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359 Query: 394 G 394 G Sbjct: 360 G 360 >gi|75674631|ref|YP_317052.1| F0F1 ATP synthase subunit beta [Nitrobacter winogradskyi Nb-255] gi|118573709|sp|Q3SVJ1|ATPB_NITWN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|74419501|gb|ABA03700.1| ATP synthase F1 subcomplex beta subunit [Nitrobacter winogradskyi Nb-255] Length = 476 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/313 (31%), Positives = 162/313 (51%), Gaps = 15/313 (4%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ A GR++N +G+P+D + DL I ++ P ++ + TGI+V+D Sbjct: 81 RVPVGAGTLGRIMNVIGEPVDEQGPVKADDLR-PIHAEAPSYTDQSTEAEILVTGIKVVD 139 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206 + P G +IG+F G+G+GK+ L+ + + + VGER RE EFI Sbjct: 140 LLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFI 199 Query: 207 EDYL----GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 E + G K +V +E P R L+ +T+AE+F +G +VL +D+I RF Sbjct: 200 ESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRF 259 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ D Sbjct: 260 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSITSVQAIYVPADDLTD 317 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIH 381 P + + LD VLNR+++E+G YP VDPL S SR+ +E + L ++ Sbjct: 318 PAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARLVQQVLQ 377 Query: 382 RFEETRDIRLIGG 394 R++ +DI I G Sbjct: 378 RYKSLQDIIAILG 390 >gi|172058681|ref|YP_001815141.1| F0F1 ATP synthase subunit beta [Exiguobacterium sibiricum 255-15] gi|171991202|gb|ACB62124.1| ATP synthase F1, beta subunit [Exiguobacterium sibiricum 255-15] Length = 472 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 106/330 (32%), Positives = 170/330 (51%), Gaps = 16/330 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG PID + L + I K P N + +TGI+V+D+ P Sbjct: 93 ATLGRVFNVLGNPID-EKELDASVERLPIHKKAPTFDNLSTKVEILETGIKVVDLLAPYI 151 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + +K Sbjct: 152 KGGKIGLFGGAGVGKTVLIQELINNIAQEHSGISVFAGVGERTREGNDLYHEMTDSGVIK 211 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ +V +E P R LT +T+AEYF +G +VLL +D+I R+ + E++ G Sbjct: 212 QTAMVFGQMNEPPGARLRVALTGLTMAEYFRDEQGQDVLLFVDNIFRYTQAGSEVSALLG 271 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 272 RMPSAVGYQPTLATEMGMLQERI--TSTNKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 329 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR L+ + + + + + R++E +DI I Sbjct: 330 TTNLERRLSEMGIYPAVDPLASTSRALSPEIVGEEHYGVARQVQETLQRYKELQDIIAI- 388 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ I FL Q+ Sbjct: 389 ---LGMDELSEEDKLTVHRARRIQFFLSQN 415 >gi|307823035|ref|ZP_07653265.1| ATP synthase F1, beta subunit [Methylobacter tundripaludum SV96] gi|307735810|gb|EFO06657.1| ATP synthase F1, beta subunit [Methylobacter tundripaludum SV96] Length = 459 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 158/298 (53%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I + P + + +TGI+VID+ P G Sbjct: 83 LGRIMNVLGEPIDEKGPIGE-KVKWGIHREAPSYAEQAAATELLETGIKVIDLVCPFTKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF +G +VL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP +DPL S SR D E V+ + ++ R++E RDI I G Sbjct: 320 LSRQIAELGIYPAIDPLDSTSRQLDPLVIGQEHYDVARKVQGILQRYKELRDIIAILG 377 >gi|260654862|ref|ZP_05860350.1| ATP synthase F1, beta subunit [Jonquetella anthropi E3_33 E1] gi|260630364|gb|EEX48558.1| ATP synthase F1, beta subunit [Jonquetella anthropi E3_33 E1] Length = 462 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 156/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ IDG L D I P + + +TGI+VID+ P G Sbjct: 86 LGRLFNPLGRVIDGGPELTDAD-RWSIHRSAPKFTEQNPTAEIMETGIKVIDLLAPYTKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY-LGDNLKKS 217 +IG+F G+G+GK+ L+ + + + VGER RE + + G L K+ Sbjct: 145 GKIGLFGGAGVGKTVLIQELIHNVAKGHNSYSVFTGVGERTREGNDLWREMKAGGVLDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +ESP R A LT +T+AEYF + +VLL +D+I R+ + E+++ G L Sbjct: 205 ALVFGQMNESPGARMRAALTGLTMAEYFRDVEHQDVLLFIDNIFRYVQAGSEVSSLMGRL 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 265 PGAVGYQPTLANEMGSLQERI--TGTSAGSITSVQAVYVPADDLTDPAPATTFAHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E G YP VDPL S SRL + A+ ++ + ++ R++E +DI I G Sbjct: 323 VLSRRIVEMGIYPAVDPLESTSRLLEPDTVGAEHYRIARGIQEMLQRYKELQDIIAILG 381 >gi|229829780|ref|ZP_04455849.1| hypothetical protein GCWU000342_01877 [Shuttleworthia satelles DSM 14600] gi|229791769|gb|EEP27883.1| hypothetical protein GCWU000342_01877 [Shuttleworthia satelles DSM 14600] Length = 463 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 104/324 (32%), Positives = 171/324 (52%), Gaps = 12/324 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG IDG + + G EI K P ++ V++ +TGI+VID+ P G Sbjct: 86 GRLFNVLGDTIDGGEQI-TGAEEWEIHRKPPKFTDQNPVQEILETGIKVIDLIAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 ++G+F G+G+GK+ L+ + I + VGER RE + F E +K + Sbjct: 145 KVGLFGGAGVGKTVLIQELIHNIATQHGGYSIFTGVGERSREGNDLFSEMSASGVIKNTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF + +VLL +D+I RF + E+++ G +P Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDVQHKDVLLFIDNIFRFVQAGSEVSSLLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLANEMGELQERIASTKA--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R + E+G YP VDPL S SR+ +++ D + + ++ +++E +DI I G Sbjct: 323 LSRKIVEQGIYPAVDPLGSSSRILEESIVGKDHYETAQRVLQVLQKYKELQDIIAILGME 382 Query: 397 PGVDLILDK-AVHQVPIIYDFLKQ 419 D DK V++ + +FL Q Sbjct: 383 ELSD--EDKLTVYRARKVRNFLSQ 404 >gi|161830152|ref|YP_001597761.1| F0F1 ATP synthase subunit beta [Coxiella burnetii RSA 331] gi|189081330|sp|A9NBD0|ATPB_COXBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|161762019|gb|ABX77661.1| ATP synthase F1, beta subunit [Coxiella burnetii RSA 331] Length = 461 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 104/325 (32%), Positives = 169/325 (52%), Gaps = 13/325 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID + + + I P + + + +TGI+V+D+ P G Sbjct: 86 LGRIMNVLGEPIDELGPINSKE-KLPIHRPAPSFIEQSGTTELLETGIKVVDLLCPFAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 ALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R +AE G YP +DPL S SR D +E ++ + + R+EE +DI I G Sbjct: 323 LSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVARGVQETLQRYEELKDIIAILGMD 382 Query: 397 PGVDLILD--KAVHQVPIIYDFLKQ 419 +L D +AV + I FL Q Sbjct: 383 ---ELSEDDKRAVRRARKIQRFLSQ 404 >gi|320409267|gb|ADW27223.1| ATP synthase beta subunit [Phoronis vancouverensis] Length = 367 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 158/290 (54%), Gaps = 18/290 (6%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 R + PS GR+IN +G+PID + D+ + I + P ++ ++ +TGI+V Sbjct: 23 RIPVGPSTL--GRIINVIGEPIDERGPVNT-DVYLPIHQEAPEFVDMSTEQEILETGIKV 79 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203 +D+ P C G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 80 VDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYH 138 Query: 204 EFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 E IE L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 139 EMIESGVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDYEGQDVLLFIDNI 198 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 199 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 256 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 DP + + LD + VL+R +AE G YP VDPL S SR+ D +E Sbjct: 257 LTDPAPATTFAHLDANTVLSRGIAELGIYPAVDPLDSNSRILDPNIVGEE 306 >gi|157132308|ref|XP_001655991.1| ATP synthase beta subunit [Aedes aegypti] gi|108881686|gb|EAT45911.1| ATP synthase beta subunit [Aedes aegypti] Length = 504 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 167/315 (53%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + + +LS I ++ P ++ ++ TGI+V+ Sbjct: 108 IRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIDMSVEQEILVTGIKVV 166 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 167 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 225 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 226 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 285 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 286 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 343 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 344 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 403 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 404 LQDYKSLQDIIAILG 418 >gi|308238033|emb|CBK55607.1| ATP synthase subunit beta [Acidithiobacillus ferrooxidans] Length = 420 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N LG+P+DG + D + + + PA + + +TGI+VID+ P Sbjct: 64 ATLGRIMNVLGEPVDGKGPVQTED--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPF 121 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L+ R+ + + + VGER RE +F + L Sbjct: 122 AKGGKVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGVGERTREGNDFYHEMTDSGVL 181 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R A LT +T+AE+F +G ++L+ +D+I R+ + E++ G Sbjct: 182 DKVALVYGQMNEPPGNRLRAGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLG 241 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 242 RMPSAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFAHLDA 299 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP +DPL S SR D E V+ S + R++E +DI I Sbjct: 300 TVVLSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQRYKELQDIIAIL 359 Query: 394 G 394 G Sbjct: 360 G 360 >gi|229136124|ref|ZP_04264877.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST196] gi|228647283|gb|EEL03365.1| ATP synthase subunit beta [Bacillus cereus BDRD-ST196] Length = 469 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA R+E +TGI+V+D+ P Sbjct: 88 VTLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTRIEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|282892279|ref|ZP_06300675.1| hypothetical protein pah_c221o008 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497870|gb|EFB40221.1| hypothetical protein pah_c221o008 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 469 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 164/300 (54%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + L K D+ + K P Q ++ F+TGI+VID+ P Sbjct: 87 LGRIFNLLGEPLDHLEPLDK-DVPRASIHKAAPNFEDQEIQITLFETGIKVIDLLEPYPQ 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GKS ++ R S + VGER RE + ++E L + Sbjct: 146 GGKVGLFGGAGVGKSVIVMELIRNIASQHGGYSVFCGVGERTREGNDLWLEMKESGVLAR 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT + +AE+F + NVLL +D+I RF + E++ G Sbjct: 206 TSLVFGQMNEPPGARLRVALTGLAMAEHFRDQEHQNVLLFIDNIFRFIQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G+IT+V ++ V D++ DP S+ S LD Sbjct: 266 MPSAVGYQPTLQTEIGALQERI--TSTKFGSITSVQAIYVPADDYTDPAPASIFSHLDAA 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D + +E ++ + ++ R+++ ++I I G Sbjct: 324 TVLSRQIAELGIYPAVDPLGSTSRILDPHFIGEEHYRVARQVQRILQRYKDLQNIIAILG 383 >gi|254184692|ref|ZP_04891281.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655] gi|184215284|gb|EDU12265.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655] Length = 538 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 12/307 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G R+ GR+++ G P D +L I PP ++ F TGI+ Sbjct: 108 GPIRVPVGDAVLGRLLSVTGVPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIK 167 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205 VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE E Sbjct: 168 VIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEM 225 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF Sbjct: 226 LLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFV 285 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP Sbjct: 286 QAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDP 343 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 344 AVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEH 403 Query: 383 FEETRDI 389 + E +D+ Sbjct: 404 YRELQDV 410 >gi|229033937|ref|ZP_04188891.1| ATP synthase subunit beta [Bacillus cereus AH1271] gi|228728363|gb|EEL79385.1| ATP synthase subunit beta [Bacillus cereus AH1271] Length = 469 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|157136033|ref|XP_001656737.1| ATP synthase beta subunit [Aedes aegypti] gi|108881105|gb|EAT45330.1| ATP synthase beta subunit [Aedes aegypti] Length = 504 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 167/315 (53%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + + +LS I ++ P ++ ++ TGI+V+ Sbjct: 108 IRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIDMSVEQEILVTGIKVV 166 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 167 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 225 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 226 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 285 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 286 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 343 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 344 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 403 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 404 LQDYKSLQDIIAILG 418 >gi|228988529|ref|ZP_04148616.1| ATP synthase subunit beta [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158866|ref|ZP_04286923.1| ATP synthase subunit beta [Bacillus cereus ATCC 4342] gi|228624477|gb|EEK81247.1| ATP synthase subunit beta [Bacillus cereus ATCC 4342] gi|228771146|gb|EEM19625.1| ATP synthase subunit beta [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 469 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|328957984|ref|YP_004375370.1| F0F1 ATP synthase subunit beta [Carnobacterium sp. 17-4] gi|328674308|gb|AEB30354.1| F0F1 ATP synthase subunit beta [Carnobacterium sp. 17-4] Length = 468 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+ ID + + D+ + + P + +TGI+VID+ P Sbjct: 89 LGRMFNVLGETIDEKEPFPE-DVQRNPIHRNAPVFDELSSNTAILETGIKVIDLLAPYLK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +K+ Sbjct: 148 GGKIGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMQSSGVIKR 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF + G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDEVGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG+IT++ ++ V D++ DP +V + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTSKGSITSIQAIYVPADDYTDPAPATVFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S L+ + + K+ + L+ R+ E +DI I G Sbjct: 326 TNLERKLTEQGIYPAVDPLASTSSALSPEIVGEEHYKVAIEVQQLLQRYRELQDIIAILG 385 >gi|81846246|sp|Q8EWY8|ATPB_MYCPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|26453520|dbj|BAC43852.1| ATP synthase subunit beta [Mycoplasma penetrans HF-2] Length = 778 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/303 (33%), Positives = 165/303 (54%), Gaps = 11/303 (3%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 + GR+ N +G+PID K + S + K PP+ + Q + F+TGI+VID+ P Sbjct: 379 SAVLGRMFNVVGEPIDNKPMPEKVEYSP--IHKKPPSFDEQSTKTEIFETGIKVIDLLVP 436 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-GDN 213 G +IG+F G+G+GK+ L+ + I + VGER RE + + + G Sbjct: 437 YVKGGKIGLFGGAGVGKTVLVQELIHNIATGHGGLSIFAGVGERTREGNDLYHEMIDGGV 496 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 + ++ +V +E P R LTA+T+AE+F + +VLL +D+I RF+ + E++ Sbjct: 497 INQTALVFGQMNEPPGARMRVALTALTMAEHFRENNKQDVLLFIDNIFRFSQAGSEVSAL 556 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + L Sbjct: 557 LGRIPSAVGYQPTLAFEMGQLQERI--TSTKSGSITSVQAVYVPADDLTDPAPSTTFAHL 614 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D VL+R +A G YP ++PL S SR+ D + E K+ S+ ++ +FEE +DI Sbjct: 615 DAKTVLDRKIASLGIYPAINPLESSSRMLDPSIVGIEHYKVARSVQTILQKFEELQDIIA 674 Query: 392 IGG 394 I G Sbjct: 675 ILG 677 >gi|30265328|ref|NP_847705.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Ames] gi|47530867|ref|YP_022216.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. 'Ames Ancestor'] gi|49188141|ref|YP_031394.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Sterne] gi|49481141|ref|YP_039296.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140257|ref|YP_086574.1| F0F1 ATP synthase subunit beta [Bacillus cereus E33L] gi|65317282|ref|ZP_00390241.1| COG0055: F0F1-type ATP synthase, beta subunit [Bacillus anthracis str. A2012] gi|118480344|ref|YP_897495.1| F0F1 ATP synthase subunit beta [Bacillus thuringiensis str. Al Hakam] gi|165873338|ref|ZP_02217941.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0488] gi|167636395|ref|ZP_02394695.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0442] gi|167642060|ref|ZP_02400286.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0193] gi|170689704|ref|ZP_02880881.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0465] gi|170709426|ref|ZP_02899834.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0389] gi|177656024|ref|ZP_02937131.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0174] gi|196036290|ref|ZP_03103688.1| ATP synthase F1, beta subunit [Bacillus cereus W] gi|196045693|ref|ZP_03112923.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB108] gi|225867282|ref|YP_002752660.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB102] gi|227818068|ref|YP_002818077.1| ATP synthase F1, beta subunit [Bacillus anthracis str. CDC 684] gi|228936590|ref|ZP_04099384.1| ATP synthase subunit beta [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228949026|ref|ZP_04111298.1| ATP synthase subunit beta [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124809|ref|ZP_04253987.1| ATP synthase subunit beta [Bacillus cereus 95/8201] gi|229187531|ref|ZP_04314671.1| ATP synthase subunit beta [Bacillus cereus BGSC 6E1] gi|229603044|ref|YP_002869520.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0248] gi|254686272|ref|ZP_05150131.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. CNEVA-9066] gi|254724268|ref|ZP_05186052.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. A1055] gi|254735233|ref|ZP_05192942.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Western North America USA6153] gi|254744437|ref|ZP_05202117.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Kruger B] gi|254755741|ref|ZP_05207774.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Vollum] gi|254759526|ref|ZP_05211551.1| F0F1 ATP synthase subunit beta [Bacillus anthracis str. Australia 94] gi|300117815|ref|ZP_07055582.1| F0F1 ATP synthase subunit beta [Bacillus cereus SJ1] gi|81824106|sp|Q630U3|ATPB_BACCZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81828124|sp|Q6HAY0|ATPB_BACHK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81837543|sp|Q81JZ5|ATPB_BACAN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166201691|sp|A0RL95|ATPB_BACAH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808128|sp|C3P1F4|ATPB_BACAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808129|sp|C3LFH9|ATPB_BACAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808130|sp|C1F0M8|ATPB_BACC3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|30260006|gb|AAP29191.1| ATP synthase F1, beta subunit [Bacillus anthracis str. Ames] gi|47506015|gb|AAT34691.1| ATP synthase F1, beta subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49182068|gb|AAT57444.1| ATP synthase F1, beta subunit [Bacillus anthracis str. Sterne] gi|49332697|gb|AAT63343.1| ATP synthase F1, beta subunit [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51973726|gb|AAU15276.1| ATP synthase F1, beta subunit [Bacillus cereus E33L] gi|118419569|gb|ABK87988.1| ATP synthase F1 subcomplex beta subunit [Bacillus thuringiensis str. Al Hakam] gi|164710935|gb|EDR16509.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0488] gi|167509978|gb|EDR85398.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0193] gi|167528229|gb|EDR91011.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0442] gi|170125659|gb|EDS94578.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0389] gi|170666346|gb|EDT17132.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0465] gi|172079879|gb|EDT64988.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0174] gi|195991082|gb|EDX55052.1| ATP synthase F1, beta subunit [Bacillus cereus W] gi|196023524|gb|EDX62201.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB108] gi|225788702|gb|ACO28919.1| ATP synthase F1, beta subunit [Bacillus cereus 03BB102] gi|227002506|gb|ACP12249.1| ATP synthase F1, beta subunit [Bacillus anthracis str. CDC 684] gi|228595898|gb|EEK53578.1| ATP synthase subunit beta [Bacillus cereus BGSC 6E1] gi|228658600|gb|EEL14262.1| ATP synthase subunit beta [Bacillus cereus 95/8201] gi|228810599|gb|EEM56948.1| ATP synthase subunit beta [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228823025|gb|EEM68863.1| ATP synthase subunit beta [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229267452|gb|ACQ49089.1| ATP synthase F1, beta subunit [Bacillus anthracis str. A0248] gi|298724679|gb|EFI65354.1| F0F1 ATP synthase subunit beta [Bacillus cereus SJ1] Length = 469 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|328951109|ref|YP_004368444.1| V-type ATP synthase beta chain [Marinithermus hydrothermalis DSM 14884] gi|328451433|gb|AEB12334.1| V-type ATP synthase beta chain [Marinithermus hydrothermalis DSM 14884] Length = 470 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 166/309 (53%), Gaps = 15/309 (4%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ S GR N +GKPIDG + + S + P + R++ E+ +TGI ID Sbjct: 81 RLGVSKEMLGRRFNGIGKPIDGLPPVTPEKRLPIVGSPINP-VARRKPEEFIQTGISTID 139 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIE 207 + L GQ++ +F+GSG+ + L + AR D V+ + +G RE+ F++ Sbjct: 140 VMNTLIRGQKLPIFSGSGLPANELAAQIARQATVPGEDVQFAVVFAAMGITQRELAYFVQ 199 Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 ++ L +SV+ + +D+ I R + P A+T AEY + + D +VL+IL +T + + Sbjct: 200 EFERTGALSRSVLFLNRADDPTIERILTPRMALTTAEYLAFEHDYHVLVILTDMTNYCEA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 +REI + E+P RGYP ++++L + ER G E +KG++T + + + D+ PI Sbjct: 260 LREIGASREEIPGRRGYPGYMYTDLASIYERAGVVEGKKGSVTQIPILSMPDDDRTHPIP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIH 381 D I +G I L+R L +G +PP++PL S+SRLA+ K + ++ K VS L Sbjct: 320 DLTGYITEGQIQLSRELHRKGIFPPINPLPSLSRLANNGIGKGKTREDHKQVSD--QLYS 377 Query: 382 RFEETRDIR 390 + DIR Sbjct: 378 AYANGEDIR 386 >gi|291458278|ref|ZP_06597668.1| ATP synthase F1, beta subunit [Oribacterium sp. oral taxon 078 str. F0262] gi|291418811|gb|EFE92530.1| ATP synthase F1, beta subunit [Oribacterium sp. oral taxon 078 str. F0262] Length = 463 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + + + S EI K P +++ V++ +TGI+VID+ P G Sbjct: 85 LGRLFNVLGETIDKKEEILDSE-SWEIHRKPPSFVDQSPVQEVLETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ R+ + I + VGER RE + + +K + Sbjct: 144 GKVGLFGGAGVGKTVLIQELIRNVATEHGGYSIFTGVGERSREGNDLYTEMTASGVIKNT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +ESP R T +T+AEYF + +VLL +D+I RF + E+++ G + Sbjct: 204 ALVFGQMNESPGARMRVAETGLTMAEYFRDVEHKDVLLFIDNIFRFVQAGSEVSSLLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +G++T+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLATEMGQLQERIAST--RQGSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ ++ E + ++ + ++ E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLESSSRILEEDIVGKEHYETAQAVLRSLQKYRELQDIIAILG 380 >gi|229164252|ref|ZP_04292185.1| ATP synthase subunit beta [Bacillus cereus R309803] gi|228619192|gb|EEK76085.1| ATP synthase subunit beta [Bacillus cereus R309803] Length = 468 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410 >gi|209363699|ref|YP_001423602.2| F0F1 ATP synthase subunit beta [Coxiella burnetii Dugway 5J108-111] gi|212211723|ref|YP_002302659.1| F0F1 ATP synthase subunit beta [Coxiella burnetii CbuG_Q212] gi|212217738|ref|YP_002304525.1| F0F1 ATP synthase subunit beta [Coxiella burnetii CbuK_Q154] gi|215919300|ref|NP_820921.2| F0F1 ATP synthase subunit beta [Coxiella burnetii RSA 493] gi|206584185|gb|AAO91435.2| ATP synthase beta chain [Coxiella burnetii RSA 493] gi|207081632|gb|ABS77940.2| ATP synthase beta chain [Coxiella burnetii Dugway 5J108-111] gi|212010133|gb|ACJ17514.1| ATP synthase beta chain [Coxiella burnetii CbuG_Q212] gi|212012000|gb|ACJ19380.1| ATP synthase beta chain [Coxiella burnetii CbuK_Q154] Length = 483 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 103/326 (31%), Positives = 170/326 (52%), Gaps = 15/326 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID + + + I P + + + +TGI+V+D+ P G Sbjct: 108 LGRIMNVLGEPIDELGPINSKE-KLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKG 166 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 167 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 226 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 227 ALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMP 286 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD +V Sbjct: 287 SAVGYQPTLAEEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 344 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R +AE G YP +DPL S SR D +E ++ + + R+EE +DI I Sbjct: 345 LSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVARGVQETLQRYEELKDIIAI---- 400 Query: 397 PGVDLILD---KAVHQVPIIYDFLKQ 419 G+D + + +AV + I FL Q Sbjct: 401 LGMDELSEDDKRAVRRARKIQRFLSQ 426 >gi|153206110|ref|ZP_01945373.1| ATP synthase F1, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165918717|ref|ZP_02218803.1| ATP synthase F1, beta subunit [Coxiella burnetii RSA 334] gi|81839029|sp|Q83AF5|ATPB_COXBU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081329|sp|A9KBF7|ATPB_COXBN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|120577240|gb|EAX33864.1| ATP synthase F1, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|165917545|gb|EDR36149.1| ATP synthase F1, beta subunit [Coxiella burnetii RSA 334] Length = 461 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 104/325 (32%), Positives = 169/325 (52%), Gaps = 13/325 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID + + + I P + + + +TGI+V+D+ P G Sbjct: 86 LGRIMNVLGEPIDELGPINSKE-KLPIHRPAPSFIEQSGATELLETGIKVVDLLCPFAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 ALVYGQMNEPPGNRLRVGLTGLTLAEAFRDEGRDVLLFIDNIFRYTLAGVEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R +AE G YP +DPL S SR D +E ++ + + R+EE +DI I G Sbjct: 323 LSRQIAERGIYPAIDPLDSTSRQLDPLIIGEEHYRVARGVQETLQRYEELKDIIAILGMD 382 Query: 397 PGVDLILD--KAVHQVPIIYDFLKQ 419 +L D +AV + I FL Q Sbjct: 383 ---ELSEDDKRAVRRARKIQRFLSQ 404 >gi|114331979|ref|YP_748201.1| F0F1 ATP synthase subunit beta [Nitrosomonas eutropha C91] gi|122313313|sp|Q0AEJ6|ATPB2_NITEC RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|114308993|gb|ABI60236.1| ATP synthase F1, beta subunit [Nitrosomonas eutropha C91] Length = 485 Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 158/294 (53%), Gaps = 11/294 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N G+PIDG + +S I + PP + + V +TGI+ ID+ +P+ G Sbjct: 113 GRMLNVFGEPIDGKPA-PNATISRSI-HQAPPVLEERVVHSTILETGIKAIDLLSPIERG 170 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLK-KS 217 + G+F G+G+GK+ L++ + +SL +GER RE E + ++ K+ Sbjct: 171 GKTGLFGGAGVGKTVLITELINNTAQHHKGVSLFCGIGERSREAEELYREMGEAGVRDKT 230 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 V++ E+P +R + TA+T+AEYF G +VLL++D++ RF + E++ G + Sbjct: 231 VMLFGQMSEAPGVRFLVGKTALTMAEYFRDDLGQDVLLLIDNVFRFVQAGSEVSGLLGRM 290 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P GY ++ +EL L ERI + KG IT++ +V V D+ DP A + S L + Sbjct: 291 PSRVGYQPTLATELASLQERI--TSTRKGAITSIQAVYVPADDFTDPAAAHIFSHLSASV 348 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 VL+R A EG YP VDPLAS S + A + ++ + +EE RDI Sbjct: 349 VLSRKRASEGLYPAVDPLASTSVMLTPAVVGQRHYDIARAVRRTLAEYEELRDI 402 >gi|256372558|ref|YP_003110382.1| ATP synthase F1, beta subunit [Acidimicrobium ferrooxidans DSM 10331] gi|256009142|gb|ACU54709.1| ATP synthase F1, beta subunit [Acidimicrobium ferrooxidans DSM 10331] Length = 471 Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 G V N LG+P+D G DL EI PP + + + F+TGI+VID+ P G Sbjct: 94 LGHVFNVLGQPLDAPSLEGADDL-WEIHRSAPPLEDLEPKAQMFETGIKVIDLLEPYVQG 152 Query: 162 QRIGVFAGSGIGKSTL-LSMFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L + M R + + VGER RE + +E + K+ Sbjct: 153 GKVGLFGGAGVGKTVLIMEMINRVAQQHGGVSVFAGVGERTREGTDLLLEMQESGVISKA 212 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L A+T+AEYF K +VLL +D+I RF + E++ G L Sbjct: 213 ALVYGQMDEPPGVRLRVGLAALTMAEYFRDVKDQDVLLFIDNIFRFVQAGSEVSALLGRL 272 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + + +IT++ +V V D++ DP + + LD Sbjct: 273 PSAVGYQPTLADEMGELQERI--TSTRRRSITSLQAVYVPADDYTDPAPFTTFTFLDATT 330 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPLAS S + D + ++ S+ ++ R+++ +DI I G Sbjct: 331 ELSRQIASLGIYPAVDPLASTSNILDPTIVGERHYQVARSVQQILQRYKDLQDIIAILG 389 >gi|190358736|sp|Q04G20|ATPB_OENOB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 466 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 153/296 (51%), Gaps = 8/296 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+P+DG D + I P + +TGI+VID+ P Sbjct: 85 ATLGRVFNVLGEPVDGGDPIPNSVDRHPIHRSAPKYDELATSTEVLETGIKVIDLLEPYL 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G + G+F G+G+GK+ L+ + IS+ VGER RE + + E LK Sbjct: 145 RGGKTGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLK 204 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 + +V +E P R LT +T+AE F +G +VLL +D+I RF + E++ G Sbjct: 205 NTAMVYGQMNEPPGARMRVGLTGLTMAEDFRDQEGKDVLLFIDNIFRFTQAGSEVSALLG 264 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPL S S L D ++ + + H + R++E +DI Sbjct: 323 TTNLERSLTQQGIYPAVDPLESTSSALTPDIVGEDHYEVATQVQHFLQRYKELQDI 378 >gi|309390205|gb|ADO78085.1| ATP synthase F1 subcomplex beta subunit [Halanaerobium praevalens DSM 2228] Length = 470 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 159/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID +G D M I P ++ + F+TGI+VID+ P G Sbjct: 90 LGRVFNVLGETIDNRGEVGT-DERMPIHRPAPKFEEQESSTELFETGIKVIDLLAPYTRG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + + S VGER RE + ++E D L K Sbjct: 149 GKVGLFGGAGVGKTVLIQELINNIATEHGGYSVFSGVGERTREGNDLWLEFQEADILDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVGLTGLTMAEYFRDEAGQDVLLFIDNIFRFIQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ ++ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 269 PSAVGYQPTLAYDVGTLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S S + D DE V+ + ++ +++ +DI I G Sbjct: 327 VLSRDIVEKGIYPAVDPLDSTSNILDPRIIGDEHYDVAREVQEILQEYKDLQDIIAILG 385 >gi|242280912|ref|YP_002993041.1| ATP synthase F1, beta subunit [Desulfovibrio salexigens DSM 2638] gi|242123806|gb|ACS81502.1| ATP synthase F1, beta subunit [Desulfovibrio salexigens DSM 2638] Length = 467 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 23/305 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR++N +G+P+D +G D S+ I P + + +TGI+V+D+ P Sbjct: 92 GRILNVVGRPVD---EMGPIDAKESLPIHRAAPEFTEQSTKVELLETGIKVVDLLVPFPK 148 Query: 161 GQRIGVFAGSGIGKSTLL--------SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 G ++G+F G+G+GK+ +L CF + VGER RE + + Sbjct: 149 GGKMGLFGGAGVGKTVILMEMINNIAKQHGGKSCF-----AGVGERTREGNDLYHEMKDA 203 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L+KS +V +E P R LTA+TIAEYF +G++VLL +D+I RF + E++ Sbjct: 204 GVLEKSALVYGQMNEPPGARARVALTALTIAEYFRDVEGEDVLLFIDNIFRFTQAGSEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + S Sbjct: 264 ALLGRMPSAVGYQPTLGTDLGGLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFS 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LDG +VL+R +AE G YP VDPL S SR+ D + + ++ ++++ +DI Sbjct: 322 HLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNILGVEHYNTAREVQMVLQKYKDLQDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|310818216|ref|YP_003950574.1| ATP synthase subunit beta [Stigmatella aurantiaca DW4/3-1] gi|309391288|gb|ADO68747.1| ATP synthase subunit beta [Stigmatella aurantiaca DW4/3-1] Length = 481 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G P+D + + I P + + + F+TGI+VID+ P G Sbjct: 96 GRILNVIGAPVDERGPI-TSQQTWPIHRPAPTFVEQDVRVQAFETGIKVIDLLGPYTRGG 154 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ LL R+ ++ + + VGER RE + + N+ Sbjct: 155 KIGLFGGAGVGKTVLLMELIRNVAKERGGFSVFAGVGERTREGNDLYHEMQEGNVINTKN 214 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + V+V +E P R L+A+TIAEYF +G +VLL +D+I RF + E++ Sbjct: 215 LEESQCVLVYGQMNEPPGARARVALSALTIAEYFRDVEGRDVLLFVDNIFRFTQAGSEVS 274 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + KG++T+V ++ V D+ DP + + Sbjct: 275 ALLGRIPSAVGYQPTLSTEMGALQERI--TSTNKGSVTSVQAIYVPADDLTDPAPATTFA 332 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VLNR+++E G YP VDPL S SR+ D E V+ + ++ +++E +DI Sbjct: 333 HLDATTVLNRAISELGIYPAVDPLDSTSRILDPNVVGPEHYAVARKVQGILQKYKELQDI 392 Query: 390 RLIGG 394 I G Sbjct: 393 IAILG 397 >gi|283853224|ref|ZP_06370476.1| ATP synthase F1, beta subunit [Desulfovibrio sp. FW1012B] gi|283571397|gb|EFC19405.1| ATP synthase F1, beta subunit [Desulfovibrio sp. FW1012B] Length = 470 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 104/309 (33%), Positives = 165/309 (53%), Gaps = 13/309 (4%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVE-KGFKTGIRV 151 R+ GR++N +G+P+D +G D + M + + PA Q + +TGI+V Sbjct: 86 RVPVGKAALGRILNVVGRPVD---EMGPVDAAAMWPIHRPAPAFVDQSTSIELLETGIKV 142 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIED 208 ID+ P G ++G+F G+G+GK+ +L + +S+ VGER RE + + Sbjct: 143 IDLLIPFPKGGKMGLFGGAGVGKTVVLMELINNIAKHHGGLSVFAGVGERTREGNDLYNE 202 Query: 209 YL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 + D L K+ +V +E P R LTA+T AEYF +G +VLL +D+I RF + Sbjct: 203 FKEADILGKASLVYGQMNEPPGARARVALTALTCAEYFRDEEGQDVLLFIDNIFRFTQAG 262 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ ++L L ERI + +KG+IT+V +V V D+ DP Sbjct: 263 SEVSALLGRMPSAVGYQPTLGTDLGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPA 320 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEE 385 + S LDG +VL+R +AE G YP VDPL S SR+ D D + + ++++ Sbjct: 321 TTFSHLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPLVLGGDHYATAREVQMSLQKYKD 380 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 381 LQDIIAILG 389 >gi|196039564|ref|ZP_03106869.1| ATP synthase F1, beta subunit [Bacillus cereus NVH0597-99] gi|218906482|ref|YP_002454316.1| ATP synthase F1, beta subunit [Bacillus cereus AH820] gi|228917914|ref|ZP_04081450.1| ATP synthase subunit beta [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228930312|ref|ZP_04093316.1| ATP synthase subunit beta [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229094415|ref|ZP_04225487.1| ATP synthase subunit beta [Bacillus cereus Rock3-42] gi|301056772|ref|YP_003794983.1| ATP synthase subunit B [Bacillus anthracis CI] gi|226739976|sp|B7JGN0|ATPB_BACC0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|196029724|gb|EDX68326.1| ATP synthase F1, beta subunit [Bacillus cereus NVH0597-99] gi|218536432|gb|ACK88830.1| ATP synthase F1, beta subunit [Bacillus cereus AH820] gi|228688952|gb|EEL42779.1| ATP synthase subunit beta [Bacillus cereus Rock3-42] gi|228829298|gb|EEM74931.1| ATP synthase subunit beta [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228841711|gb|EEM86822.1| ATP synthase subunit beta [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300378941|gb|ADK07845.1| ATP synthase subunit B [Bacillus cereus biovar anthracis str. CI] Length = 469 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|53802691|ref|YP_112553.1| F0F1 ATP synthase subunit beta [Methylococcus capsulatus str. Bath] gi|81823727|sp|Q60CR4|ATPB_METCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|53756452|gb|AAU90743.1| ATP synthase F1, beta subunit [Methylococcus capsulatus str. Bath] Length = 460 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I K P ++ + +TGI+VID+ P G Sbjct: 83 LGRIMNVLGDPIDEKGPIGEKE-RWGIHRKAPSYQDQAAANELLETGIKVIDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPNLAEEMGILQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR D E + + + R++E RDI I G Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLVIGHEHYETTRRVQSTLQRYKELRDIIAILG 377 >gi|167566739|ref|ZP_02359655.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis EO147] Length = 391 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 153/293 (52%), Gaps = 12/293 (4%) Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 ++ G+P D +L I PP ++ F TGI+VID+ PL G + Sbjct: 1 MLTVTGEPGDDGAALAPDVARRPIHRGAPPLSEQKSSTALFATGIKVIDLLAPLAQGGKA 60 Query: 165 GVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218 +F G+G+GK+ L+ +M R + + +GER RE E + D G L ++V Sbjct: 61 AMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGRTV 118 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R PLTA+ IAEYF + NVLL++D++ RF + E++ G LP Sbjct: 119 LVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLP 178 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ SE+ L ERI + E +TA+ +V V D+ DP ++ + +D +V Sbjct: 179 SRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVV 236 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 L+R++A EG YP +DP+AS S L D DE V+ + +I + E +D+ Sbjct: 237 LSRAMAAEGMYPAIDPVASSSILLDPLVVGDEHVEVAIEVRRVIEHYRELQDV 289 >gi|154148258|ref|YP_001406268.1| F0F1 ATP synthase subunit beta [Campylobacter hominis ATCC BAA-381] gi|190358270|sp|A7I177|ATPB_CAMHC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|153804267|gb|ABS51274.1| ATP synthase F1, beta subunit [Campylobacter hominis ATCC BAA-381] Length = 465 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 101/301 (33%), Positives = 163/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N G ID G+ + S+ + PP+ Q + F+TGI+V+D+ P Sbjct: 87 LGRIFNVTGDLIDEGEPEDFETRWSIH---RDPPSFEDQSTKSEIFETGIKVVDLLAPYA 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ ++ + F + + VGER RE + + L Sbjct: 144 KGGKVGLFGGAGVGKTVIIMELIHNVAFKHNGYSVFAGVGERTREGNDLYNEMKESGVLD 203 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G Sbjct: 204 KVALTYGQMNEPPGARNRIALTGLTMAEYFRDELGLDVLMFIDNIFRFSQSGSEMSALLG 263 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ SE+ +L ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 264 RIPSAVGYQPTLASEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDA 321 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 VLNRS+AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I Sbjct: 322 TTVLNRSIAEKGIYPAVDPLNSTSRMLDPQIVGEEHYKIARGVQAVLQKYKDLQDIIAIL 381 Query: 394 G 394 G Sbjct: 382 G 382 >gi|126653441|ref|ZP_01725537.1| F0F1 ATP synthase subunit beta [Bacillus sp. B14905] gi|126589797|gb|EAZ83930.1| F0F1 ATP synthase subunit beta [Bacillus sp. B14905] Length = 471 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID + + I + P + +TGI+V+D+ P G Sbjct: 90 LGRVFNVLGEVIDLGEEIPADARRDSIHREAPTFEELSTTVEILETGIKVVDLLAPYIKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + F E +K++ Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAQEHSGISVFAGVGERTREGNDLFFEMSDSGVIKQT 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGADVLLFIDNIFRFTQAGSEVSALLGRM 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + KG++T++ ++ V D++ DP + + LD Sbjct: 270 PSAVGYQPTLATEMGKLQERI--TSTNKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L+E G YP VDPLAS SR L+ + A+ + + + I R+ E +DI I G Sbjct: 328 NLERKLSEMGIYPAVDPLASTSRALSPEIVGAEHYAIATGVQRTIQRYRELQDIIAILG 386 >gi|229105898|ref|ZP_04236522.1| ATP synthase subunit beta [Bacillus cereus Rock3-28] gi|228677472|gb|EEL31725.1| ATP synthase subunit beta [Bacillus cereus Rock3-28] Length = 469 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|157151073|ref|YP_001450821.1| F0F1 ATP synthase subunit beta [Streptococcus gordonii str. Challis substr. CH1] gi|189081352|sp|A8AYG1|ATPB_STRGC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157075867|gb|ABV10550.1| ATP synthase F1, beta subunit [Streptococcus gordonii str. Challis substr. CH1] Length = 468 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D G I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFGDDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|328545829|ref|YP_004305938.1| F0F1 ATP synthase subunit beta [polymorphum gilvum SL003B-26A1] gi|326415569|gb|ADZ72632.1| F0F1 ATP synthase subunit beta [Polymorphum gilvum SL003B-26A1] Length = 474 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + D I + P + + + TGI+V+D+ P G Sbjct: 87 LGRIMNVIGEPVDEAGPIPH-DAKRAIHQEAPSFVEQSTEAQILVTGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR----EFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYWEMIESGVNKK 204 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +T+AE+F +G +VL +D+I RF + E+ Sbjct: 205 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V +V V D+ DP S Sbjct: 265 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAVYVPADDLTDPAPASTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VLNR++AE+G YP VDPL S SR+ D DE V+ + + R++ +D Sbjct: 323 AHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLDPRIIGDEHYTVARKVQETLQRYKALQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|300174065|ref|YP_003773231.1| ATP synthase F1 subunit beta [Leuconostoc gasicomitatum LMG 18811] gi|299888444|emb|CBL92412.1| ATP synthase F1, beta subunit [Leuconostoc gasicomitatum LMG 18811] Length = 466 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 156/301 (51%), Gaps = 18/301 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME-----IMSKVPPAMNRQRVEKGFKTGIRVIDI 154 GRV N LG+P+D + GD+S E I P + +TGI+VID+ Sbjct: 85 ATLGRVFNVLGEPVDNN-----GDISAETPRHSIHRDAPKYDELANSTEILETGIKVIDL 139 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG 211 P G +IG+F G+G+GK+ L+ + IS+ VGER RE + + Sbjct: 140 LAPYVRGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMAE 199 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 LK++ +V +E P R LT +T+AE F +G +VLL +D+I RF + E+ Sbjct: 200 SGVLKQTAMVYGQMNEPPGARMRVALTGLTMAENFRDDEGKDVLLFIDNIFRFTQAGSEV 259 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + Sbjct: 260 SALLGRIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTF 317 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD L RSL ++G YP VDPLAS S D E ++ + + + R+ E +D Sbjct: 318 AHLDATTNLERSLTQQGIYPAVDPLASTSSALDPQIVGQEHYEIATEVQRTLQRYRELQD 377 Query: 389 I 389 I Sbjct: 378 I 378 >gi|229087793|ref|ZP_04219913.1| ATP synthase subunit beta [Bacillus cereus Rock3-44] gi|228695521|gb|EEL48386.1| ATP synthase subunit beta [Bacillus cereus Rock3-44] Length = 469 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|262283120|ref|ZP_06060887.1| F0F1 ATP synthase subunit beta [Streptococcus sp. 2_1_36FAA] gi|262261372|gb|EEY80071.1| F0F1 ATP synthase subunit beta [Streptococcus sp. 2_1_36FAA] Length = 468 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D G I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFGDDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|327399150|ref|YP_004340019.1| ATP synthase subunit beta [Hippea maritima DSM 10411] gi|327181779|gb|AEA33960.1| ATP synthase subunit beta [Hippea maritima DSM 10411] Length = 468 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 101/301 (33%), Positives = 158/301 (52%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D LG D+ I PP + + F+TGI+VID+ P Sbjct: 91 LGRIMNVVGEPVD---ELGPISSDVRWPIHRDAPPLEEQSTSSEMFETGIKVIDLLCPYA 147 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G + G+F G+G+GK+ L+ + S+ VGER RE + + L Sbjct: 148 KGGKTGLFGGAGVGKTVLIMELIHNVAMHHGGYSVFCGVGERTREGNDLWNEMKESGVLD 207 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ ++ +E P R LT +T+AEYF K +VL+ +D+I RF + E++ G Sbjct: 208 KAALIYGQMNEPPGARARVGLTGLTVAEYFRDEKHLDVLIFIDNIFRFTQAGSEVSALLG 267 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + S LD Sbjct: 268 RIPSAVGYQPTLGTDMGELQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFSHLDA 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 VL+R LAE G YP VDPL S SR+ D A E + + ++ R++E +DI I Sbjct: 326 TTVLSRKLAELGIYPAVDPLDSTSRILDPAVVGREHYETARQVQEILQRYKELQDIIAIL 385 Query: 394 G 394 G Sbjct: 386 G 386 >gi|146088806|ref|XP_001466152.1| ATPase beta subunit [Leishmania infantum JPCM5] gi|134070254|emb|CAM68591.1| putative ATPase beta subunit [Leishmania infantum JPCM5] gi|322499677|emb|CBZ34751.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 525 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID +G+ + M I ++ P ++ + TGI+VID+ P C G Sbjct: 122 GRIFNVLGDAIDQRGPVGE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 180 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L++ A+ V VGER RE + + + + Sbjct: 181 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 239 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K V+V +E P R +A+T+AEYF +G NVLL +D+I RF + E++ Sbjct: 240 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 299 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +L L ERI + KG+IT+V +V V D+ DP + S Sbjct: 300 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 357 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R++AE G YP V+PL SR+ D D + + ++ +++E +DI Sbjct: 358 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVDHYNVAQDIVQMLTKYKELQDI 416 >gi|89092247|ref|ZP_01165201.1| ATP synthase subunit B [Oceanospirillum sp. MED92] gi|89083335|gb|EAR62553.1| ATP synthase subunit B [Oceanospirillum sp. MED92] Length = 458 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 107/332 (32%), Positives = 171/332 (51%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G E +S G V + G + GR+++ LG PID +G+ + M Sbjct: 49 VVRAIAMGQTEGVSRGQDVANTGAPVSVPVGTATLGRIMDVLGNPIDECGEIGEEE-RMP 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I K P + + +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 108 IHRKAPSYDEQAASNELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 167 Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + S+ VGER RE +F + N L K +V +E P R LT +T+AE Sbjct: 168 EHSGFSVFAGVGERTREGNDFYYEMKESNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 227 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 228 KFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT++ +V V D+ DP + S LD +VL+R +AE G YP VDPL S SR D Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFSHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDP 345 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E ++ ++ ++ R++E +DI I G Sbjct: 346 LVIGTEHYEIARNVQGVLQRYKELKDIIAILG 377 >gi|323702636|ref|ZP_08114298.1| ATP synthase F1, beta subunit [Desulfotomaculum nigrificans DSM 574] gi|323532455|gb|EGB22332.1| ATP synthase F1, beta subunit [Desulfotomaculum nigrificans DSM 574] Length = 472 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 161/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+ IDG + + K D I P +++ + +TGI+VID+ P G Sbjct: 92 LGRLLNVLGEVIDGKEPV-KADKYYPIHRPAPALIDQSTKAEVLETGIKVIDLMIPFLKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKKS 217 +IG+F G+G+GK+ ++ + IS+ VGER RE + + L K+ Sbjct: 151 GKIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLDKT 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 ++V +E P R LT +T+AEYF +G + LL +D+I RF + E++ G + Sbjct: 211 IMVFGQMNEPPGARLRVGLTGLTMAEYFRDEEGADTLLFIDNIFRFTQAGSEVSALLGRM 270 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + KG++T+V ++ V D+ DP + + LD + Sbjct: 271 PSAVGYQPTLATEMGQLQERI--TSTRKGSVTSVQAIYVPADDLTDPAPANAFAHLDATV 328 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D E + + ++ R++E +DI I G Sbjct: 329 VLSRQIAELGIYPAVDPLDSTSRILDPQIVGKEHYECARGVQAVLQRYKELQDIIAILG 387 >gi|304392606|ref|ZP_07374546.1| ATP synthase F1, beta subunit [Ahrensia sp. R2A130] gi|303295236|gb|EFL89596.1| ATP synthase F1, beta subunit [Ahrensia sp. R2A130] Length = 513 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 163/312 (52%), Gaps = 22/312 (7%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+IN +G+P+D + + + I ++ PP + + + TGI+V+D+ P Sbjct: 120 MLGRIINVIGEPVDEVGPITATE-TRAIHAEAPPYIEQSTNSEILVTGIKVVDLLAPYAK 178 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK- 215 G +IG+F G+G+GK+ L+ + A++ V VGER RE + + + N+ Sbjct: 179 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYWEMIESNVNV 237 Query: 216 ------------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 K+ +V +E P R L+ +TIAE F KG +VL +D+I RF Sbjct: 238 DPNENNGSTTGSKAALVYGQMNEPPGARARVALSGLTIAEDFRDKGQDVLFFVDNIFRFT 297 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP Sbjct: 298 QAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTTKGSITSVQAIYVPADDLTDP 355 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 + + LD VLNRS+AE+G YP VDPL S SR+ D DE V+ + ++ R Sbjct: 356 APATSFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPLVIGDEHYAVAREVQEVLQR 415 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 416 YKALQDIIAILG 427 >gi|56461719|ref|YP_157000.1| F0F1 ATP synthase subunit beta [Idiomarina loihiensis L2TR] gi|81600226|sp|Q5QZI6|ATPB_IDILO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|56180729|gb|AAV83451.1| F0F1-type ATP synthase, beta subunit [Idiomarina loihiensis L2TR] Length = 461 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + M I P + + +TGI+VID+ P G Sbjct: 86 LGRIMDVLGNPIDEAGPIGE-EEKMSIHRAAPSYEEQSNTNELLETGIKVIDLICPFAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAE F +G +VL +D+I R+ + E++ G +P Sbjct: 205 SLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 LNR +A G YP VDPL S SR D DE + ++ R++E +DI I G Sbjct: 323 LNRDIASLGIYPAVDPLDSTSRQLDPQVIGDEHYDTAMGVQEVLQRYKELKDIIAILG 380 >gi|157870646|ref|XP_001683873.1| ATPase beta subunit [Leishmania major strain Friedlin] gi|68126940|emb|CAJ05183.1| putative ATPase beta subunit [Leishmania major strain Friedlin] Length = 525 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID +G+ + M I ++ P ++ + TGI+VID+ P C G Sbjct: 122 GRIFNVLGDAIDQRGPVGE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 180 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L++ A+ V VGER RE + + + + Sbjct: 181 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 239 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K V+V +E P R +A+T+AEYF +G NVLL +D+I RF + E++ Sbjct: 240 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 299 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +L L ERI + KG+IT+V +V V D+ DP + S Sbjct: 300 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 357 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R++AE G YP V+PL SR+ D D + + ++ +++E +DI Sbjct: 358 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVDHYNVAQDIVQMLTKYKELQDI 416 >gi|229020524|ref|ZP_04177270.1| ATP synthase subunit beta [Bacillus cereus AH1273] gi|229026744|ref|ZP_04183077.1| ATP synthase subunit beta [Bacillus cereus AH1272] gi|228734539|gb|EEL85200.1| ATP synthase subunit beta [Bacillus cereus AH1272] gi|228740771|gb|EEL91023.1| ATP synthase subunit beta [Bacillus cereus AH1273] Length = 469 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|229193557|ref|ZP_04320501.1| ATP synthase subunit beta [Bacillus cereus ATCC 10876] gi|228589862|gb|EEK47737.1| ATP synthase subunit beta [Bacillus cereus ATCC 10876] Length = 459 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 78 VTLGRVFNVLGDAIDLDGEV-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 135 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 136 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 194 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 195 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 254 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 255 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 312 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 313 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 372 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 373 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 401 >gi|206970293|ref|ZP_03231246.1| ATP synthase F1, beta subunit [Bacillus cereus AH1134] gi|228924040|ref|ZP_04087316.1| ATP synthase subunit beta [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228955552|ref|ZP_04117555.1| ATP synthase subunit beta [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072772|ref|ZP_04205971.1| ATP synthase subunit beta [Bacillus cereus F65185] gi|229082519|ref|ZP_04214982.1| ATP synthase subunit beta [Bacillus cereus Rock4-2] gi|229153468|ref|ZP_04281646.1| ATP synthase subunit beta [Bacillus cereus m1550] gi|229181552|ref|ZP_04308878.1| ATP synthase subunit beta [Bacillus cereus 172560W] gi|206734870|gb|EDZ52039.1| ATP synthase F1, beta subunit [Bacillus cereus AH1134] gi|228601920|gb|EEK59415.1| ATP synthase subunit beta [Bacillus cereus 172560W] gi|228630072|gb|EEK86723.1| ATP synthase subunit beta [Bacillus cereus m1550] gi|228700951|gb|EEL53474.1| ATP synthase subunit beta [Bacillus cereus Rock4-2] gi|228710263|gb|EEL62238.1| ATP synthase subunit beta [Bacillus cereus F65185] gi|228804114|gb|EEM50730.1| ATP synthase subunit beta [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228835530|gb|EEM80895.1| ATP synthase subunit beta [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 468 Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 87 VTLGRVFNVLGDAIDLDGEV-PADVHRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 203 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 204 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 263 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 321 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 322 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 381 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 382 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 410 >gi|255003175|ref|ZP_05278139.1| F0F1 ATP synthase subunit beta [Anaplasma marginale str. Puerto Rico] Length = 485 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 110/342 (32%), Positives = 180/342 (52%), Gaps = 21/342 (6%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + +S GD G ++P GRV + LG+PIDG S+ D+ Sbjct: 67 MVRCVAMGSTDSLSRGDKFISTGNQMMAPVGRGTLGRVFDVLGRPIDGLGSVSS-DVEFR 125 Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182 + P+++ QRV + TGI+V+D+ P G ++G+F G+G+GK+ L+S A Sbjct: 126 PIHAKAPSLSEQRVAAEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNVA 185 Query: 183 RSDCFDKVIISLVGERGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMA 234 F + + VGER RE RE +E + D KS V+V +E P R Sbjct: 186 THKGFS--VFAGVGERTREGNDLYREMVESGVISRDEPSKSQAVLVYGQMNEPPGARMRV 243 Query: 235 PLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 LTA+T+AEYF S+G +VL +D++ RF S E++ G +P A GY ++ +E+ + Sbjct: 244 ALTALTMAEYFRDSEGQDVLFFVDNVFRFTQSGSEVSALLGRIPSAVGYQPTLAAEMGAM 303 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 ERI + G+IT+V ++ V D+ DP + + LD VL+R ++E G YP VDP Sbjct: 304 QERI--TSTNTGSITSVQAIYVPADDLTDPAPAASFAHLDSTTVLSRQISELGIYPAVDP 361 Query: 354 LASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L S S+ L+ + ++ ++ + ++ ++ +DI I G Sbjct: 362 LESTSQALSPEVVGSEHYEVAQEVKRILQTYKSLQDIIAILG 403 >gi|213853005|ref|ZP_03382537.1| ATP synthase SpaL [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 179 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 74/161 (45%), Positives = 105/161 (65%), Gaps = 2/161 (1%) Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 A T+AEYF +G V+L +DS+TR+A ++R++A SGE P RGYP SVF LPRLLER Sbjct: 7 ATTVAEYFRDQGKRVVLFIDSMTRYARALRDVALASGERPARRGYPASVFDNLPRLLER- 65 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 P +G+ITA +VL++ + DP+AD +RSILDGH+ L+R LA +G YP +D L SV Sbjct: 66 -PGATSEGSITAFYTVLLESEEEADPMADEIRSILDGHLYLSRKLAGQGHYPAIDVLKSV 124 Query: 358 SRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPG 398 SR+ + + + S++ L+ R EE + +G YRP Sbjct: 125 SRVFGQVTTPTHAEQASAVRKLMTRLEELQLFIDLGEYRPA 165 >gi|323483071|ref|ZP_08088464.1| hypothetical protein HMPREF9474_00213 [Clostridium symbiosum WAL-14163] gi|323691483|ref|ZP_08105754.1| ATP synthase F1 [Clostridium symbiosum WAL-14673] gi|323403611|gb|EGA95916.1| hypothetical protein HMPREF9474_00213 [Clostridium symbiosum WAL-14163] gi|323504456|gb|EGB20247.1| ATP synthase F1 [Clostridium symbiosum WAL-14673] Length = 471 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 164/300 (54%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+ IDG + L D ++ + PP+ Q V + +TGI+VID+ P Sbjct: 85 LGRLFNVLGETIDGGEGLK--DQEHWVIHRDPPSFEDQSPVVEVLETGIKVIDLLAPYAK 142 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ ++ + I + VGER RE + ++E L+K Sbjct: 143 GGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWVEMKESGVLEK 202 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDREHQDVLLFIDNIFRFVQAGSEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI +++ G++T+V +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLANEMGELQERIASTKE--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E + + ++ +++E +DI I G Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEAEVVGEEHYETARRVQEILQKYKELQDIIAILG 380 >gi|229175979|ref|ZP_04303475.1| ATP synthase subunit beta [Bacillus cereus MM3] gi|228607472|gb|EEK64798.1| ATP synthase subunit beta [Bacillus cereus MM3] Length = 469 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 VTLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|255657422|ref|ZP_05402831.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-23m63] gi|296449018|ref|ZP_06890808.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP08] gi|296879841|ref|ZP_06903814.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP07] gi|296262111|gb|EFH08916.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP08] gi|296429130|gb|EFH15004.1| ATP synthase F1 sector beta subunit [Clostridium difficile NAP07] Length = 464 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LGKP+DG + K + I P + + +TGI+V+D+ P G Sbjct: 87 LGRIFNVLGKPVDGKPA-PKSAPKLPIHRPAPAYDELETTAEILETGIKVVDLLAPYLKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + + K+ Sbjct: 146 GKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYGEMSESGVINKT 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE+F +G +VLL +D+I RF + E++ G + Sbjct: 206 ALVFGQMNEPPGARMRVALTGLTMAEHFRDEQGQDVLLFVDNIFRFTQAGSEVSALLGRM 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + S LD Sbjct: 266 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAKT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++ G YP VDPL S SR+ D + E ++ + ++ R++E +DI I G Sbjct: 324 VLSRQISSLGIYPAVDPLESTSRILDPSIVGKEHYEVARGVQSILQRYKELQDIIAILG 382 >gi|152993354|ref|YP_001359075.1| F0F1 ATP synthase subunit beta [Sulfurovum sp. NBC37-1] gi|190358707|sp|A6QB59|ATPB_SULNB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|151425215|dbj|BAF72718.1| F0F1-type ATP synthase, beta subunit [Sulfurovum sp. NBC37-1] Length = 466 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID + + I PP ++ + F+TGI+V+D+ P G Sbjct: 87 LGRIFNVIGEAIDEAGPV-EAKTHWSIHRDPPPFEDQSTKTEVFETGIKVVDLLAPYSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + + + VGER RE + + N L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELINNVAMKHSGYSVFAGVGERTREGNDLYYEMKESNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 + E P R LT +T+AEYF + G +VL+ +D+I RFA S E++ G + Sbjct: 206 ALCYGQMSEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFAQSGSEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + KG+IT+V +V V D+ DP SV + LD Sbjct: 266 PSAVGYQPTLSREMGALQERI--TSTTKGSITSVQAVYVPADDLTDPAPASVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VLNRS+AE+G YP VDPL S SR+ D +E V+ + ++ ++++ +DI I G Sbjct: 324 VLNRSIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYNVARGVQQILQKYKDLQDIIAILG 382 >gi|115379930|ref|ZP_01466987.1| ATP synthase F1, beta subunit [Stigmatella aurantiaca DW4/3-1] gi|115363055|gb|EAU62233.1| ATP synthase F1, beta subunit [Stigmatella aurantiaca DW4/3-1] Length = 421 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 162/305 (53%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G P+D + + I P + + + F+TGI+VID+ P G Sbjct: 36 GRILNVIGAPVDERGPI-TSQQTWPIHRPAPTFVEQDVRVQAFETGIKVIDLLGPYTRGG 94 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ LL R+ ++ + + VGER RE + + N+ Sbjct: 95 KIGLFGGAGVGKTVLLMELIRNVAKERGGFSVFAGVGERTREGNDLYHEMQEGNVINTKN 154 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + V+V +E P R L+A+TIAEYF +G +VLL +D+I RF + E++ Sbjct: 155 LEESQCVLVYGQMNEPPGARARVALSALTIAEYFRDVEGRDVLLFVDNIFRFTQAGSEVS 214 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + KG++T+V ++ V D+ DP + + Sbjct: 215 ALLGRIPSAVGYQPTLSTEMGALQERI--TSTNKGSVTSVQAIYVPADDLTDPAPATTFA 272 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VLNR+++E G YP VDPL S SR+ D E V+ + ++ +++E +DI Sbjct: 273 HLDATTVLNRAISELGIYPAVDPLDSTSRILDPNVVGPEHYAVARKVQGILQKYKELQDI 332 Query: 390 RLIGG 394 I G Sbjct: 333 IAILG 337 >gi|325662851|ref|ZP_08151420.1| ATP synthase subunit beta [Lachnospiraceae bacterium 4_1_37FAA] gi|331086567|ref|ZP_08335645.1| ATP synthase subunit beta [Lachnospiraceae bacterium 9_1_43BFAA] gi|325470903|gb|EGC74132.1| ATP synthase subunit beta [Lachnospiraceae bacterium 4_1_37FAA] gi|330410400|gb|EGG89832.1| ATP synthase subunit beta [Lachnospiraceae bacterium 9_1_43BFAA] Length = 463 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 98/294 (33%), Positives = 159/294 (54%), Gaps = 11/294 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + D+ E + + P Q E + +TGI+VID+ P G Sbjct: 90 GRIFNVLGEAID--EKPAPTDVEYEPIHRKAPTFEEQATEAEMLETGIKVIDLLCPYQKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + + + VGER RE + + E + K+ Sbjct: 148 GKIGLFGGAGVGKTVLIQELITNIATEHGGYSVFTGVGERTREGNDLYYEMTESGVINKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ G + Sbjct: 208 AMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRM 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD + Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDAKV 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 VL+R++ E G YP VDPL S SR+ D +E V+ + ++ +++E +DI Sbjct: 326 VLSRAITELGIYPAVDPLESSSRMLDPHIVGEEHYNVARGVQEILQKYKELQDI 379 >gi|126701091|ref|YP_001089988.1| F0F1 ATP synthase subunit beta [Clostridium difficile 630] gi|254977092|ref|ZP_05273564.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-66c26] gi|255094420|ref|ZP_05323898.1| F0F1 ATP synthase subunit beta [Clostridium difficile CIP 107932] gi|255102677|ref|ZP_05331654.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-63q42] gi|255308498|ref|ZP_05352669.1| F0F1 ATP synthase subunit beta [Clostridium difficile ATCC 43255] gi|255316172|ref|ZP_05357755.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-76w55] gi|255518833|ref|ZP_05386509.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-97b34] gi|255652012|ref|ZP_05398914.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-37x79] gi|260684987|ref|YP_003216272.1| F0F1 ATP synthase subunit beta [Clostridium difficile CD196] gi|260688645|ref|YP_003219779.1| F0F1 ATP synthase subunit beta [Clostridium difficile R20291] gi|306521754|ref|ZP_07408101.1| F0F1 ATP synthase subunit beta [Clostridium difficile QCD-32g58] gi|123066472|sp|Q180W5|ATPB_CLOD6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|115252528|emb|CAJ70371.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1 sector subunit beta ) [Clostridium difficile] gi|260211150|emb|CBA66591.1| ATP synthase beta chain [Clostridium difficile CD196] gi|260214662|emb|CBE07286.1| ATP synthase beta chain [Clostridium difficile R20291] Length = 464 Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LGKP+DG + K + I P + + +TGI+V+D+ P G Sbjct: 87 LGRIFNVLGKPVDGKPA-PKSAPKLPIHRPAPAYDELETTAEILETGIKVVDLLAPYLKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + + + K+ Sbjct: 146 GKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYGEMSESGVINKT 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE+F +G +VLL +D+I RF + E++ G + Sbjct: 206 ALVFGQMNEPPGARMRVALTGLTMAEHFRDEQGQDVLLFVDNIFRFTQAGSEVSALLGRM 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + S LD Sbjct: 266 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAKT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++ G YP VDPL S SR+ D + E ++ + ++ R++E +DI I G Sbjct: 324 VLSRQISSLGIYPAVDPLESTSRILDPSIVGKEHYEVARGVQSILQRYKELQDIIAILG 382 >gi|356768|prf||1211283A ATPase beta F1 Length = 473 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 108/331 (32%), Positives = 171/331 (51%), Gaps = 17/331 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+PID + + D + + + P E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G GK+ L+ + + IS+ VGER RE + + + Sbjct: 149 IKGGKIGLFGGAGDGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + KG+IT++ ++ V D++ DP + S LD Sbjct: 269 GRMPSAIGYQPTLATEMGQLQERI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R LAE G YP VDPL S SR LA + + ++ + + R++E +DI I Sbjct: 327 ATTNLERKLAEMGIYPAVDPLVSTSRALAPEIVGEEHYQVARKVQQTLERYKELQDIIAI 386 Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ VH+ I FL Q+ Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413 >gi|254497050|ref|ZP_05109876.1| F0F1 ATP synthase subunit beta [Legionella drancourtii LLAP12] gi|254353721|gb|EET12430.1| F0F1 ATP synthase subunit beta [Legionella drancourtii LLAP12] Length = 380 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 102/304 (33%), Positives = 163/304 (53%), Gaps = 11/304 (3%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRV 151 +I S GR++N G+P+DG + L K + +I +K P + +E+G +TGI+ Sbjct: 1 MQIPVSPDCLGRLLNIFGEPLDGGEPL-KTNEYRDIFAK-PSPIEMTTIEQGILETGIKA 58 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIED 208 ID+ P G +IG+F G+G+GK+ LL F + IS+ +GER RE E + Sbjct: 59 IDLLCPFIRGSKIGLFGGAGVGKTILLMEFMHAIIQLHQGISVFAGIGERIREGHELWHE 118 Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 + K+++V DESP +R A L+A++ AEY + VL ++D+I RF + Sbjct: 119 MKSAGVMDKTLMVFGQMDESPGVRFRAGLSALSYAEYLRDTVAHEVLFLVDNIYRFVQAG 178 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 EI+ G +P GY ++ +E+ + ERI + KG +T+V +V V D+ +DP Sbjct: 179 SEISGLLGRMPANVGYQPTLMTEIAEIEERI--TSTSKGAVTSVQAVYVPADDMSDPAVT 236 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEE 385 + + LD +VL+RS A +G YP VDPL S S+ DK A + ++ + R+ E Sbjct: 237 GIITHLDSIVVLSRSQAGKGIYPAVDPLGSKSKFMDKVVLGARHYSVAQAVREHLARYRE 296 Query: 386 TRDI 389 DI Sbjct: 297 LEDI 300 >gi|254470785|ref|ZP_05084188.1| ATP synthase F1, beta subunit [Pseudovibrio sp. JE062] gi|211959927|gb|EEA95124.1| ATP synthase F1, beta subunit [Pseudovibrio sp. JE062] Length = 475 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 162/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + + D I + P + + + TGI+V+D+ P G Sbjct: 88 LGRIMNVIGEPVDEAGPI-EHDAKRGIHQEAPAFVEQSTEAEILPTGIKVVDLIAPYAKG 146 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR----EFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYWEMIESGVNKE 205 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +TIAE F KG +VL +D+I RF + E+ Sbjct: 206 KGGEGSKAALVYGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDNIFRFTQAGAEV 265 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V +V V D+ DP S Sbjct: 266 SALLGRIPSAVGYQPTLATDMGGMQERI--TTTSKGSITSVQAVYVPADDLTDPAPASTF 323 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VLNR++AE+G YP VDPL S SR+ D DE ++ +++ + R++ +D Sbjct: 324 AHLDATTVLNRAIAEKGIYPAVDPLDSSSRMLDPRIIGDEHYEVATAVQETLQRYKSLQD 383 Query: 389 IRLIGG 394 I I G Sbjct: 384 IIAILG 389 >gi|169826600|ref|YP_001696758.1| F0F1 ATP synthase subunit beta [Lysinibacillus sphaericus C3-41] gi|226740652|sp|B1HM56|ATPB_LYSSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|168991088|gb|ACA38628.1| ATP synthase subunit beta [Lysinibacillus sphaericus C3-41] Length = 471 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID + + I + P + +TGI+V+D+ P G Sbjct: 90 LGRVFNVLGEVIDLGEEIPADARRDSIHREAPTFEELSTTVEILETGIKVVDLLAPYIKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + F E +K++ Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAQEHSGISVFAGVGERTREGNDLFFEMSDSGVIKQT 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGADVLLFIDNIFRFTQAGSEVSALLGRM 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + KG++T++ ++ V D++ DP + + LD Sbjct: 270 PSAVGYQPTLATEMGKLQERI--TSTNKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L+E G YP VDPLAS SR L+ + A+ + + + I R+ E +DI I G Sbjct: 328 NLERKLSEMGIYPAVDPLASTSRALSPEIVGAEHYAVATGVQRTIQRYRELQDIIAILG 386 >gi|94468834|gb|ABF18266.1| F0F1-type ATP synthase beta subunit [Aedes aegypti] Length = 504 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 167/315 (53%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + + +LS I ++ P ++ ++ TGI+V+ Sbjct: 108 IRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIDMSVEQEILVTGIKVV 166 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 167 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 225 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 226 MIEGGVIPLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 285 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 286 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 343 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 344 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 403 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 404 LQDYKSLQDIIAILG 418 >gi|322492413|emb|CBZ27687.1| putative ATPase beta subunit [Leishmania mexicana MHOM/GT/2001/U1103] Length = 525 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID +G+ + M I ++ P ++ + TGI+VID+ P C G Sbjct: 122 GRIFNVLGDAIDQRGPVGE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 180 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L++ A+ V VGER RE + + + + Sbjct: 181 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 239 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K V+V +E P R +A+T+AEYF +G NVLL +D+I RF + E++ Sbjct: 240 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 299 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +L L ERI + KG+IT+V +V V D+ DP + S Sbjct: 300 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 357 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R++AE G YP V+PL SR+ D D + + ++ +++E +DI Sbjct: 358 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVDHYNVAQDIVQMLTKYKELQDI 416 >gi|228994024|ref|ZP_04153925.1| ATP synthase subunit beta [Bacillus pseudomycoides DSM 12442] gi|228765672|gb|EEM14325.1| ATP synthase subunit beta [Bacillus pseudomycoides DSM 12442] Length = 464 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 165/304 (54%), Gaps = 14/304 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 83 ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 140 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 141 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 199 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 200 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 259 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 260 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 317 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 318 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 377 Query: 391 LIGG 394 I G Sbjct: 378 AILG 381 >gi|157870644|ref|XP_001683872.1| ATPase beta subunit [Leishmania major strain Friedlin] gi|68126939|emb|CAJ05181.1| putative ATPase beta subunit [Leishmania major strain Friedlin] Length = 525 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID +G+ + M I ++ P ++ + TGI+VID+ P C G Sbjct: 122 GRIFNVLGDAIDQRGPVGE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 180 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L++ A+ V VGER RE + + + + Sbjct: 181 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 239 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K V+V +E P R +A+T+AEYF +G NVLL +D+I RF + E++ Sbjct: 240 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 299 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +L L ERI + KG+IT+V +V V D+ DP + S Sbjct: 300 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 357 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R++AE G YP V+PL SR+ D D + + ++ +++E +DI Sbjct: 358 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVDHYNVAQDIVQMLTKYKELQDI 416 >gi|291520260|emb|CBK75481.1| ATP synthase F1 subcomplex beta subunit [Butyrivibrio fibrisolvens 16/4] Length = 464 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 103/316 (32%), Positives = 161/316 (50%), Gaps = 9/316 (2%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D+V + GR+ N LG+ ID + G M I K P + + Sbjct: 71 DVVATGAPISVPVGEATLGRIFNVLGEAID-EQPAPTGVEKMPIHRKAPAFEEQATSTEM 129 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE 201 +TGI+V+D+ P G +IG+F G+G+GK+ L+ + + + + VGER RE Sbjct: 130 LETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFTGVGERTRE 189 Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSI 259 + + E + K+ +V +E P R LT +T+AEYF KG +VLL +D+I Sbjct: 190 GNDLYYEMKESGVIDKTCMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLFIDNI 249 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ Sbjct: 250 FRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADD 307 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DP + + LD VL RS+AE G YP VDPL S SR+ D E V+ + Sbjct: 308 LTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLGSTSRILDPRIVGQEHFTVARGVQE 367 Query: 379 LIHRFEETRDIRLIGG 394 ++ +++E +DI I G Sbjct: 368 ILQKYKELQDIIAILG 383 >gi|85712587|ref|ZP_01043634.1| ATP synthase subunit B [Idiomarina baltica OS145] gi|85693578|gb|EAQ31529.1| ATP synthase subunit B [Idiomarina baltica OS145] Length = 461 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + M I P + +TGI+VID+ P G Sbjct: 86 LGRIMNVLGQPIDEAGPIGEEE-RMSIHRAAPTYEEQSNTSDLLETGIKVIDLICPFAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAE F +G +VL +D+I R+ + E++ G +P Sbjct: 205 SLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 LNR +A G YP VDPL S SR D +E + ++ R++E +DI I G Sbjct: 323 LNRDIASLGIYPAVDPLDSTSRQLDPLVIGEEHYDTAMGVQEVLQRYKELKDIIAILG 380 >gi|163942993|ref|YP_001647877.1| F0F1 ATP synthase subunit beta [Bacillus weihenstephanensis KBAB4] gi|226739980|sp|A9VSA3|ATPB_BACWK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|163865190|gb|ABY46249.1| ATP synthase F1, beta subunit [Bacillus weihenstephanensis KBAB4] Length = 469 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 178/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 VTLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|301168587|emb|CBW28177.1| ATP synthase beta chain [Bacteriovorax marinus SJ] Length = 479 Score = 149 bits (377), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 162/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN G+PID S+G + S +I P ++ ++ F TGI+VID+ P G Sbjct: 100 GRIINVTGQPIDERGSIGNKE-SSDIHRDAPTFEDQSTTKEPFFTGIKVIDLLAPYLKGG 158 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 +IG+F G+G+GK+ L+ ++ + F + + VGER RE R+ ++ + K Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIATQHGGFS--VFAGVGERTREGRDLYDEMSESGVIDK 216 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF + +VL +D+I RF + E++ G Sbjct: 217 TALVYGQMNEPPGARARVALTGLTVAEYFRDVEKQDVLFFVDNIFRFTQAGSEVSALLGR 276 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ + ERI + + G+IT++ +V V D++ DP + + LD Sbjct: 277 IPSAVGYQPTLSTEMGAMQERI--TSTKDGSITSIQAVYVPADDYTDPAPATTFAHLDAT 334 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++AE G YP VDPL S S + DE ++ ++ R++E +DI I G Sbjct: 335 TELSRAIAEIGIYPAVDPLTSSSTILSAEVLGDEHYNTARAVQEILQRYKELQDIIAILG 394 >gi|261366298|ref|ZP_05979181.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176] gi|282571896|gb|EFB77431.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176] Length = 465 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 109/329 (33%), Positives = 169/329 (51%), Gaps = 20/329 (6%) Query: 78 GEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME---IMSKVP 133 GE + GD V G +P GR+ N LG+PID KG + + + P Sbjct: 61 GEGLGRGDEVIATGHTIETPVGEATLGRMFNVLGEPIDE-----KGPVETPEKWSIHRDP 115 Query: 134 PAMNRQR-VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--- 189 PA ++Q + +TGI+VID+ P G +IG+F G+G+GK+ L+ R+ + Sbjct: 116 PAFDKQSPTTEILETGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGY 175 Query: 190 VIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 I + VGER RE + + +G++ L K+ +V +E P R LT +T+AEYF Sbjct: 176 SIFTGVGERTREGNDLWRE-MGESGVLSKTALVFGQMNEPPGARMRVALTGLTMAEYFRD 234 Query: 248 K-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + NVLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + G Sbjct: 235 RQKQNVLLFIDNIFRYVQAGSEVSALMGRMPSAVGYQPTLADEVGALQERI--TSTKDGA 292 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT+V +V V D+ DP + S LD VL+R + E+G YP VDPL S SR+ + Sbjct: 293 ITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRKIVEQGIYPAVDPLESTSRILEPDIV 352 Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 ++ L+ R+ + +DI I G Sbjct: 353 GRRHYEIARGAQELLQRYRDLQDIIAILG 381 >gi|114571|sp|P07677|ATPB_BACP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|77453|pir||A25504 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain - thermophilic bacterium PS-3 gi|2981977|pdb|1SKY|E Chain E, Crystal Structure Of The Nucleotide Free Alpha3beta3 Sub- Complex Of F1-Atpase From The Thermophilic Bacillus Ps3 gi|45804|emb|CAA28277.1| unnamed protein product [Bacillus sp. PS3] gi|45817|emb|CAA30655.1| unnamed protein product [Bacillus sp. PS3] gi|217147|dbj|BAA00066.1| thermophilic proton ATPase beta subunit [Bacillus sp. PS3] Length = 473 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 107/331 (32%), Positives = 171/331 (51%), Gaps = 17/331 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+PID + + D + + + P E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G + LL +D+I RF + E++ Sbjct: 209 SKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDGLLFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + KG+IT++ ++ V D++ DP + S LD Sbjct: 269 GRMPSAIGYQPTLATEMGQLQERI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R LAE G YP VDPL S SR LA + + ++ + + R++E +DI I Sbjct: 327 ATTNLERKLAEMGIYPAVDPLVSTSRALAPEIVGEEHYQVARKVQQTLERYKELQDIIAI 386 Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ VH+ I FL Q+ Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413 >gi|307720697|ref|YP_003891837.1| ATP synthase F1 subcomplex subunit beta [Sulfurimonas autotrophica DSM 16294] gi|306978790|gb|ADN08825.1| ATP synthase F1 subcomplex beta subunit [Sulfurimonas autotrophica DSM 16294] Length = 464 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N +G+ IDG + + D + + PPA+ ++ + F+TGI+V+D+ P Sbjct: 87 LGRIFNVIGETIDGGEQVS--DAPTWSIHREPPALVDQSTTTEMFETGIKVVDLLAPYAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ ++ + +S+ VGER RE + + N L K Sbjct: 145 GGKVGLFGGAGVGKTVIIMELIHNVAHGHEGLSVFAGVGERTREGNDLYYEMKESNVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + E P R LT +T+AEYF K +VL+ +D+I RFA S E++ G Sbjct: 205 VALCYGQMSEPPGARNRIALTGLTMAEYFRDEKKLDVLMFIDNIFRFAQSGSEMSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L +RI + + G+IT+V +V V D+ DP SV + LD Sbjct: 265 IPSAVGYQPTLAREMGALQDRI--TSTKDGSITSVQAVYVPADDLTDPAPASVFAHLDAT 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VLNR +AE+G YP VDPL S SRL D +E V+ + + ++++ +DI I G Sbjct: 323 TVLNRKIAEKGIYPAVDPLDSTSRLLDPQILGEEHYNVARGVQQTLQKYKDLQDIIAILG 382 >gi|163850895|ref|YP_001638938.1| F0F1 ATP synthase subunit beta [Methylobacterium extorquens PA1] gi|218529719|ref|YP_002420535.1| F0F1 ATP synthase subunit beta [Methylobacterium chloromethanicum CM4] gi|240138026|ref|YP_002962498.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens AM1] gi|254560587|ref|YP_003067682.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens DM4] gi|163662500|gb|ABY29867.1| ATP synthase F1, beta subunit [Methylobacterium extorquens PA1] gi|218522022|gb|ACK82607.1| ATP synthase F1, beta subunit [Methylobacterium chloromethanicum CM4] gi|240007995|gb|ACS39221.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens AM1] gi|254267865|emb|CAX23731.1| ATP synthase F1 sector subunit beta [Methylobacterium extorquens DM4] Length = 485 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 160/311 (51%), Gaps = 24/311 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + + D I PP ++ + TGI+V+D+ P G Sbjct: 96 GRIMNVIGEPIDEAGPI-QSDTLRAIHQPAPPYTDQSTESQILVTGIKVVDLLAPYAKGG 154 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + N Sbjct: 155 KIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESNVNKN 212 Query: 214 LK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264 K K +V +ESP R LT +TIAE F +G +VL +D+I RF Sbjct: 213 PKENGGSAEGSKCALVYGQMNESPGARSRVALTGLTIAEDFRDQGQDVLFFVDNIFRFTQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 273 AGSEVSALLGRIPSAVGYQPTLSTDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD L+RS+AE+G YP VDPL S SR+ A +E ++ + + R+ Sbjct: 331 PAASFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPAILGEEHYEVARKVQQTLQRY 390 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 391 KSLQDIIAILG 401 >gi|114800518|ref|YP_760593.1| F0F1 ATP synthase subunit beta [Hyphomonas neptunium ATCC 15444] gi|123128756|sp|Q0C100|ATPB_HYPNA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|114740692|gb|ABI78817.1| ATP synthase F1, beta subunit [Hyphomonas neptunium ATCC 15444] Length = 475 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 162/306 (52%), Gaps = 14/306 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + D M I ++ P +++ + TGI+VID+ P Sbjct: 87 ATLGRIMNVIGEPIDERGPV-NADTYMPIHAQAPAFVDQATESEVLVTGIKVIDLLCPYA 145 Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + F + + VGER RE + + + N+ Sbjct: 146 KGGKIGLFGGAGVGKTVLIMELVNNIAKLFGGYSVFAGVGERTREGNDLYHEMIESNVIN 205 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 + +V +E P R LT +T AEYF +G +VL +D+I RF + E+ Sbjct: 206 LEGESRMSLVYGQMNEPPGARARVALTGLTQAEYFRDVEGKDVLFFVDNIFRFTQAGSEV 265 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ DP + Sbjct: 266 SALLGRIPSAVGYQPTLATDMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATSF 323 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VLNR+++E+G YP VDPL S SR+ D +E ++ + ++ +++E +D Sbjct: 324 AHLDATTVLNRAISEKGIYPAVDPLDSTSRILDPMVVGEEHYEVARGVQQILQKYKELQD 383 Query: 389 IRLIGG 394 I I G Sbjct: 384 IIAILG 389 >gi|303239773|ref|ZP_07326297.1| ATP synthase F1, beta subunit [Acetivibrio cellulolyticus CD2] gi|302592710|gb|EFL62434.1| ATP synthase F1, beta subunit [Acetivibrio cellulolyticus CD2] Length = 464 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 164/300 (54%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG P+D + K + + I P + + + +TGI+V+D+ P G Sbjct: 87 LGRLFNVLGDPVDNMGEV-KTEKRLPIHRPAPVLEDLKPATEILETGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216 +IG+F G+G+GK+ L+ R+ + + + VGER RE + D + D+ ++K Sbjct: 146 GKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFTGVGERTREGNDLWND-MNDSGVIEK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF + G +VLL +D+I RF + E++ G Sbjct: 205 TALVFGQMNEPPGSRMRVGLSGLTMAEYFRDEMGQDVLLFIDNIFRFVQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +++ L ERI + KG+IT+V +V V D+ DP + + LD Sbjct: 265 VPSAVGYQPTLATDVGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFAHLDAT 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ D + +E K+ + ++ R++E +DI I G Sbjct: 323 TVLSRQIVEQGIYPAVDPLDSTSRVLDPSVVGEEHYKVARRVQEILQRYKELQDIIAILG 382 >gi|150388193|ref|YP_001318242.1| F0F1 ATP synthase subunit beta [Alkaliphilus metalliredigens QYMF] gi|172052470|sp|A6TK65|ATPB_ALKMQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|149948055|gb|ABR46583.1| ATP synthase F1, beta subunit [Alkaliphilus metalliredigens QYMF] Length = 464 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 163/299 (54%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D + + + + I + P ++ + F+TGI+V+D+ P G Sbjct: 88 LGRIFNVLGEVVDEGKPV-EAKMHLPIHREAPSFEEQEAATEIFETGIKVVDLIAPYARG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + + +S+ VGER RE + + + + K+ Sbjct: 147 GKVGLFGGAGVGKTVLIMELINNIAKEHGGLSVFAGVGERTREGNDLYHEMIESGVIDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 SLVYGQMNEPPGARMRVGLTGLTMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++E G YP VDPL S SR+ D A E ++ + ++ R++E +DI I G Sbjct: 325 VLSRQISELGIYPAVDPLDSNSRILDPATVGQEHYEVARGVQEVLQRYKELQDIIAILG 383 >gi|218282096|ref|ZP_03488395.1| hypothetical protein EUBIFOR_00970 [Eubacterium biforme DSM 3989] gi|218216889|gb|EEC90427.1| hypothetical protein EUBIFOR_00970 [Eubacterium biforme DSM 3989] Length = 466 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 105/300 (35%), Positives = 164/300 (54%), Gaps = 12/300 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LGKPIDG LG D +M I K P + + +TGI+VID+ P Sbjct: 88 LGRMFNVLGKPIDG---LGDVDANTMPIHRKAPAFDEQSTTSEPLETGIKVIDLLCPYAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + K ++ VGER RE + + L K Sbjct: 145 GGKIGLFGGAGVGKTVLIQELIHNIAKEHGGKSVVVGVGERTREGNDMYHEMKDSGVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +ESP R LT +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 205 TVLVYGQMNESPGARMRVGLTGLTMAEYFRDVEHQDVLLFIDNIFRFTQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + + G+IT+V ++ V D+ DP + S LD Sbjct: 265 VPSAVGYQPTLATEMGQLQERI--TSTKDGSITSVQAIYVPADDLTDPAPATTFSHLDAK 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +A G YP VDPL S SR+ D ++ K+ + +++ R+++ +DI I G Sbjct: 323 TVLDRDIAALGIYPAVDPLESSSRILDPLVVGEKHYKVARGVQNILQRYKDLQDIIAILG 382 >gi|160914778|ref|ZP_02076992.1| hypothetical protein EUBDOL_00785 [Eubacterium dolichum DSM 3991] gi|158433318|gb|EDP11607.1| hypothetical protein EUBDOL_00785 [Eubacterium dolichum DSM 3991] Length = 466 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N LG+ IDG LGK + + ++ + + P + Q+ + +TGI+VID+ P Sbjct: 89 GRMFNVLGREIDG---LGKVEAATKLPIHRAAPTFDEQQTSAEMLETGIKVIDLLCPYAK 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + +++ VGER RE + + L K Sbjct: 146 GGKIGLFGGAGVGKTVLIQELIHNIAKEHGGMSVVTGVGERTREGNDMYHEMKDSGVLDK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGE 275 +V+V +ESP R LT +T+AE+F +VLL +D+I RF + E++ G Sbjct: 206 TVLVYGQMNESPGARMRVGLTGLTMAEHFRDHDHQDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + + G+IT+V ++ V D+ DP + + LD Sbjct: 266 MPSAVGYQPTLATEMGQLQERI--TSTKNGSITSVQAIYVPADDLTDPAPATAFTHLDAK 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +A G YP VDPL S SR+ D +E ++ + ++ R++E +DI I G Sbjct: 324 TVLDRDIAALGIYPAVDPLESSSRILDPLVVGEEHYEVARGVQEILQRYKELQDIIAILG 383 >gi|315221776|ref|ZP_07863690.1| ATP synthase F1, beta subunit [Streptococcus anginosus F0211] gi|319939415|ref|ZP_08013775.1| ATP synthase subunit beta [Streptococcus anginosus 1_2_62CV] gi|315189162|gb|EFU22863.1| ATP synthase F1, beta subunit [Streptococcus anginosus F0211] gi|319811401|gb|EFW07696.1| ATP synthase subunit beta [Streptococcus anginosus 1_2_62CV] Length = 468 Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + G+ I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFGEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|317052409|ref|YP_004113525.1| ATP synthase F1 subunit beta [Desulfurispirillum indicum S5] gi|316947493|gb|ADU66969.1| ATP synthase F1, beta subunit [Desulfurispirillum indicum S5] Length = 466 Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 159/300 (53%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + + I + P +++ +TGI+V+D+ P Sbjct: 83 ATLGRILNVIGEPVDEGEPV-NAEEYWSIHREAPSFVDQDTQSTMLETGIKVVDLLCPYA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ R+ + + + VGER RE + + + Sbjct: 142 KGGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSVFAGVGERTREGNDLYHEMKDSGVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K+ +V +E P R L+ +TIAE F G +VLL +D+I RF + E++ G Sbjct: 202 KAALVYGQMNEPPGARMRVALSGLTIAENFREDGLDVLLFVDNIFRFTQAGSEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLSTEMGNLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VLNRS+AE G YP VDPL S SR+ + D + ++ +++ R++ +DI I G Sbjct: 320 TVLNRSIAELGIYPAVDPLDSTSRILEPGVVGQDHYHVARAVQNILQRYKALQDIIAILG 379 >gi|284046066|ref|YP_003396406.1| ATP synthase F1 subunit beta [Conexibacter woesei DSM 14684] gi|283950287|gb|ADB53031.1| ATP synthase F1, beta subunit [Conexibacter woesei DSM 14684] Length = 470 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 164/302 (54%), Gaps = 12/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID G D+ I + P + + F+TGI+VID+ P Sbjct: 93 ATLGRIFNVLGEPID---LAGPVDVQERRPIHAAAPNVEDLTPTTEMFETGIKVIDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213 G ++G+F G+G+GK+ L+ + + +S VGER RE + ++E Sbjct: 150 YAKGGKVGLFGGAGVGKTVLIQELIDNLAREHGGLSAFCGVGERSREGNDLWLEMKESGT 209 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 + K+++V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 210 IDKTMLVFGQMNEPPGARMRVALSGLTMAEYFRDEGQDVLLFIDNIFRFVQAGSEVSALL 269 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P GY ++ SE+ +L ERI + +G++T+V +V V D+ DP SV + L+ Sbjct: 270 GRMPSQVGYQPTLESEMGQLQERI--TSTRQGSVTSVQAVYVPADDLTDPAPASVFAHLN 327 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLI 392 VL+RS++E+G YP VDPL S S + +E V++ + ++ R++E +DI I Sbjct: 328 ATTVLSRSISEKGIYPAVDPLDSTSTILKPDILGEEHYAVANEVKQILQRYKELQDIIAI 387 Query: 393 GG 394 G Sbjct: 388 LG 389 >gi|112791410|gb|ABI21975.1| ATP synthase beta subunit [Erwinia psidii] Length = 421 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 159/304 (52%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E ++ + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYEVARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|225572845|ref|ZP_03781600.1| hypothetical protein RUMHYD_01036 [Blautia hydrogenotrophica DSM 10507] gi|225039771|gb|EEG50017.1| hypothetical protein RUMHYD_01036 [Blautia hydrogenotrophica DSM 10507] Length = 465 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 160/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ IDG + L + EI + P + V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGQTIDGKEPLDNAE-HWEIHREPPTFEEQSPVVEILETGIKVIDLLAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ ++ + I + VGER RE + + E +KK+ Sbjct: 145 KIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWTEMSESGVIKKTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF K +VLL +D+I RF + E++ G +P Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDKENQDVLLFIDNIFRFVQAGSEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLANEMGALQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R + E+G YP VDPL S SR+ + +E + + ++ +++E +DI I G Sbjct: 323 LSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYETARKVQEILQKYKELQDIIAILG 380 >gi|241888675|ref|ZP_04775982.1| ATP synthase F1, beta subunit [Gemella haemolysans ATCC 10379] gi|241864698|gb|EER69073.1| ATP synthase F1, beta subunit [Gemella haemolysans ATCC 10379] Length = 471 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 162/300 (54%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ +D + G ++ + + K P + + +TGI+VID+ P Sbjct: 90 LGRVFNVLGEAVDHGEEAG-AEVRKDSIHKEAPTFDELSTHVEVLETGIKVIDLLAPYIK 148 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + E + K Sbjct: 149 GGKIGLFGGAGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINK 208 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 209 TAMVFGQMNEPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 268 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ RL ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 MPSAVGYQPTLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 326 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R+L E G YP VDPLAS SR LA + + ++ +++ + ++ E +DI I G Sbjct: 327 TNLERALTEMGIYPAVDPLASTSRALAPEIVGEEHYQVATTIQRTLQKYRELQDIIAILG 386 >gi|46909261|gb|AAT06148.1| ATP synthase beta subunit [Mytilus edulis] Length = 427 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 165/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G PID + D + I ++ P ++ ++ +TGI+V+ Sbjct: 55 IRIPVGPATLGRIINVVGDPIDERGPVNT-DKYLSIHAEAPDFVDMSVTQEVLETGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE + + Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172 Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 L D+ K +V +E P R LT +T+AEYF +G NVLL +D+I Sbjct: 173 MITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQNVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ + Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSNSRILDPYVVGEEHYTVARNVQKI 350 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 351 LQNYKSLQDIIAILG 365 >gi|291521850|emb|CBK80143.1| ATP synthase F1 subcomplex beta subunit [Coprococcus catus GD/7] Length = 466 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 107/337 (31%), Positives = 173/337 (51%), Gaps = 14/337 (4%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGI 149 G ++ GR+ N G+ IDG + L D+ + + PPA Q V + +TGI Sbjct: 74 GGIKVPVGEQTLGRLFNVTGETIDGGEELK--DVEKWSIHRDPPAFEDQNPVAEVLETGI 131 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206 +VID+ P G +IG+F G+G+GK+ L+ R+ + I + VGER RE + Sbjct: 132 KVIDLLAPYARGGKIGLFGGAGVGKTVLIQELIRNIAAEHGGYSIFTGVGERSREGNDLW 191 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 + L+K+ +V +E P R T +T+AEYF + NVLL +D+I RF+ Sbjct: 192 SEMKASGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDQEHRNVLLFIDNIFRFSQ 251 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI ++ G +T+V +V V D+ DP Sbjct: 252 AGSEVSALLGRMPSAVGYQPTLATEMGELQERIASTKN--GAVTSVQAVYVPADDLTDPA 309 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R + E+G YP VDPL S SR+ + +E ++ + ++ + Sbjct: 310 PATTFAHLDATTVLSRKIVEQGIYPAVDPLESSSRILEPDIVGEEHYEVARKVQEILQSY 369 Query: 384 EETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQ 419 ++ +DI I G D DK V++ I FL Q Sbjct: 370 KDLQDIIAILGMEELSD--EDKITVYRARKIQKFLSQ 404 >gi|260586964|ref|ZP_05852877.1| ATP synthase F1, beta subunit [Blautia hansenii DSM 20583] gi|260542648|gb|EEX23217.1| ATP synthase F1, beta subunit [Blautia hansenii DSM 20583] Length = 462 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+ ID + L D ++ + PPA + Q V + +TGI+VID+ P Sbjct: 85 LGRLFNVLGETIDKGEQLD--DAEHWVIHRDPPAFDEQSPVVEILETGIKVIDLLAPYAK 142 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + I + VGER RE + + L+K Sbjct: 143 GGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLEK 202 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF K NVLL +D+I RF + E++ G Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLFIDNIFRFTQAGSEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + E ++ + + +++E +DI I G Sbjct: 321 TVLSRKIVEQGIYPAVDPLESSSRILEADVVGQEHYEVARKVQEYLQKYKELQDIIAILG 380 >gi|229000091|ref|ZP_04159661.1| ATP synthase subunit beta [Bacillus mycoides Rock3-17] gi|229007611|ref|ZP_04165205.1| ATP synthase subunit beta [Bacillus mycoides Rock1-4] gi|228753622|gb|EEM03066.1| ATP synthase subunit beta [Bacillus mycoides Rock1-4] gi|228759628|gb|EEM08604.1| ATP synthase subunit beta [Bacillus mycoides Rock3-17] Length = 455 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 165/304 (54%), Gaps = 14/304 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 74 ATLGRVFNVLGDAIDLDGEV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 131 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 132 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 190 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 191 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 250 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 251 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 308 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + ++ + + R++E +DI Sbjct: 309 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYEVARQVQQTLQRYKELQDII 368 Query: 391 LIGG 394 I G Sbjct: 369 AILG 372 >gi|116490723|ref|YP_810267.1| F0F1 ATP synthase subunit beta [Oenococcus oeni PSU-1] gi|116091448|gb|ABJ56602.1| ATP synthase F1 subcomplex beta subunit [Oenococcus oeni PSU-1] Length = 504 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 153/296 (51%), Gaps = 8/296 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+P+DG D + I P + +TGI+VID+ P Sbjct: 123 ATLGRVFNVLGEPVDGGDPIPNSVDRHPIHRSAPKYDELATSTEVLETGIKVIDLLEPYL 182 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G + G+F G+G+GK+ L+ + IS+ VGER RE + + E LK Sbjct: 183 RGGKTGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLK 242 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 + +V +E P R LT +T+AE F +G +VLL +D+I RF + E++ G Sbjct: 243 NTAMVYGQMNEPPGARMRVGLTGLTMAEDFRDQEGKDVLLFIDNIFRFTQAGSEVSALLG 302 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 303 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 360 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPL S S L D ++ + + H + R++E +DI Sbjct: 361 TTNLERSLTQQGIYPAVDPLESTSSALTPDIVGEDHYEVATQVQHFLQRYKELQDI 416 >gi|322387993|ref|ZP_08061600.1| ATP synthase F1 sector beta subunit [Streptococcus infantis ATCC 700779] gi|321141266|gb|EFX36764.1| ATP synthase F1 sector beta subunit [Streptococcus infantis ATCC 700779] Length = 468 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + G+ I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFGEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|317121018|ref|YP_004101021.1| ATP synthase F1 subcomplex subunit beta [Thermaerobacter marianensis DSM 12885] gi|315590998|gb|ADU50294.1| ATP synthase F1 subcomplex beta subunit [Thermaerobacter marianensis DSM 12885] Length = 469 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PIDG + + I P + + +TGI+VID+ P G Sbjct: 92 LGRMFNVLGEPIDGKEP-PQAKKRYPIHRPAPDVADVNPATEILETGIKVIDLICPFARG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + L K+ Sbjct: 151 GKVGLFGGAGVGKTVIIMELIHNIAYKHGGFSVFAGVGERTREGNDLYHELKESGVLDKT 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT + +AEYF +G ++LL +D+I RF + E++ G + Sbjct: 211 ALVFGQMNEPPGARLRVGLTGLAMAEYFRDEEGQDLLLFIDNIFRFTQAGSEVSALLGRM 270 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + KG+IT+V +V V D++ DP + + LD + Sbjct: 271 PSAVGYQPTLATEMGNLQERI--TTTRKGSITSVQAVYVPADDYTDPAPVTTFAHLDSTV 328 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R++AE G YP VDPLAS SR+ D E ++ + ++ R+++ +DI I G Sbjct: 329 RLERAIAERGIYPAVDPLASTSRILDPNIVGQEHYEVARGVQQVLQRYKDLQDIIAILG 387 >gi|290890142|ref|ZP_06553224.1| hypothetical protein AWRIB429_0614 [Oenococcus oeni AWRIB429] gi|21684964|emb|CAD22547.1| F1F0-ATPase subunit beta [Oenococcus oeni] gi|290480186|gb|EFD88828.1| hypothetical protein AWRIB429_0614 [Oenococcus oeni AWRIB429] Length = 504 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 153/296 (51%), Gaps = 8/296 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+P+DG D + I P + +TGI+VID+ P Sbjct: 123 ATLGRVFNVLGEPVDGGDPIPNSVDRHPIHRSAPKYDELATSAEVLETGIKVIDLLEPYL 182 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G + G+F G+G+GK+ L+ + IS+ VGER RE + + E LK Sbjct: 183 RGGKTGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYYEMKASGVLK 242 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 + +V +E P R LT +T+AE F +G +VLL +D+I RF + E++ G Sbjct: 243 NTAMVYGQMNEPPGARMRVGLTGLTMAEDFRDQEGKDVLLFIDNIFRFTQAGSEVSALLG 302 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 303 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 360 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPL S S L D ++ + + H + R++E +DI Sbjct: 361 TTNLERSLTQQGIYPAVDPLESTSSALTPDIVGEDHYEVATQVQHFLQRYKELQDI 416 >gi|224477091|ref|YP_002634697.1| F0F1 ATP synthase subunit beta [Staphylococcus carnosus subsp. carnosus TM300] gi|254808164|sp|B9DME3|ATPB_STACT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|222421698|emb|CAL28512.1| ATP synthase beta chain [Staphylococcus carnosus subsp. carnosus TM300] Length = 471 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 110/336 (32%), Positives = 173/336 (51%), Gaps = 13/336 (3%) Query: 68 DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 D+V + + I GD V GR + GRV N LG PID + + + Sbjct: 55 DVVRTIAMDSTDGIKRGDDVKDTGRPISVPVGDDTLGRVFNVLGDPIDNAGPIPES-VPR 113 Query: 127 EIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 E + + PP + +VE +TGI+V+D+ P G ++G+F G+G+GK+ L+ + Sbjct: 114 EPIHRQPPPFDELSTKVEI-LETGIKVVDLLAPYIKGGKVGLFGGAGVGKTVLIQELINN 172 Query: 185 DCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVT 240 + IS+ VGER RE + + E +KK+ +V +E P R L+ +T Sbjct: 173 IAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKKTAMVFGQMNEPPGARMRVALSGLT 232 Query: 241 IAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 +AEYF KG +VLL +D+I RF + E++ G +P A GY ++ +E+ +L ERI Sbjct: 233 MAEYFRDVKGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI-- 290 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + KG+IT++ +V V D++ DP + + LD L R L E G YP VDPLAS SR Sbjct: 291 TSTMKGSITSIQAVFVPADDYTDPAPATAFAHLDATTNLERKLTEMGIYPAVDPLASTSR 350 Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + + E V+ + + ++ E +DI I G Sbjct: 351 ALEPSIVGQEHYDVARRVQATLQKYRELQDIIAILG 386 >gi|58699169|ref|ZP_00373988.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|58534317|gb|EAL58497.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] Length = 418 Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 108/337 (32%), Positives = 176/337 (52%), Gaps = 28/337 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GR+ N +G+ ID L KG ++E + + PP+ QR+ E+ TGI+VID+ P Sbjct: 29 LGRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLK 87 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 88 GGKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVI 145 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 146 NINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAG 205 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP Sbjct: 206 SEISALLGRIPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPA 263 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + S LD VL+R +AE G YP VDPL S S+ L+ + + K+ S + ++ ++ Sbjct: 264 TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYKVASEVKRILQTYKS 323 Query: 386 TRDIRLIGGYRPGVD---LILDKAVHQVPIIYDFLKQ 419 +DI I G D +I+D+A I FL Q Sbjct: 324 LQDIIAILGMDELSDEDKIIVDRARK----IQKFLSQ 356 >gi|304320615|ref|YP_003854258.1| ATP synthase subunit B [Parvularcula bermudensis HTCC2503] gi|303299517|gb|ADM09116.1| ATP synthase subunit B [Parvularcula bermudensis HTCC2503] Length = 474 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 102/335 (30%), Positives = 171/335 (51%), Gaps = 24/335 (7%) Query: 79 EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 E + G LV G + P GR++N +G+PID + + + + I PP + Sbjct: 60 EGLVRGHLVTDTGEPIMVPVGEATLGRIMNVIGEPIDEAGPI-EAEGTRAIHQAAPPFVE 118 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----II 192 + + TGI+V+D+ P G +IG+F G+G+GK+ L+ + KV + Sbjct: 119 QSTEAEVLVTGIKVVDLLCPYPRGGKIGLFGGAGVGKTVLIQELINN--IAKVHGGYSVF 176 Query: 193 SLVGERGREVREFIEDYLGDNLK------------KSVVVVATSDESPILRKMAPLTAVT 240 + VGER RE + + + N+ K+ +V +E P R LT +T Sbjct: 177 AGVGERTREGNDLYWEMIESNVNVDPQKNGSAAGSKASLVYGQMNEPPGARARVALTGLT 236 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 +AE+F +G +VL +D+I RF + E++ G +P A GY ++ +++ L ERI + Sbjct: 237 VAEHFRDQGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--T 294 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 KG+IT++ +V V D+ DP + + LD LNRS+AE+G YP VDPL S SR+ Sbjct: 295 TTTKGSITSIQAVYVPADDLTDPAPATSFAHLDATTTLNRSIAEKGIYPAVDPLDSTSRI 354 Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D +E ++ + +++ R++ +DI I G Sbjct: 355 LDPRIVGEEHYEVARGVQNILQRYKSLQDIIAILG 389 >gi|238917402|ref|YP_002930919.1| F-type H+-transporting ATPase beta chain [Eubacterium eligens ATCC 27750] gi|238872762|gb|ACR72472.1| F-type H+-transporting ATPase beta chain [Eubacterium eligens ATCC 27750] Length = 470 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 106/324 (32%), Positives = 168/324 (51%), Gaps = 12/324 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ IDG + + EI + P + E+ +TGI+VID+ P G Sbjct: 94 GRLFNVLGEAIDGKEQ-PDAEEKWEIHREPPTFEEQNPAEEILETGIKVIDLLAPYAKGG 152 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ + + I + VGER RE + + E L+K+ Sbjct: 153 KIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLEKTA 212 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF K NVLL +D+I RF + E++ G +P Sbjct: 213 LVFGQMNEPPGARMRVAETGLTMAEYFRDEKHQNVLLFIDNIFRFTQAGSEVSALLGRMP 272 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD V Sbjct: 273 SAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 330 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R + E+G YP VDPL S SR+ + +E ++ + ++ +++E +DI I G Sbjct: 331 LSRKIVEQGIYPAVDPLDSTSRILEPDIVGEEHYEVARKVQEILQKYKELQDIIAILGME 390 Query: 397 PGVDLILDK-AVHQVPIIYDFLKQ 419 D DK V + I FL Q Sbjct: 391 ELAD--EDKVTVFRARKIQKFLSQ 412 >gi|270307927|ref|YP_003329985.1| ATP synthase F1, beta subunit [Dehalococcoides sp. VS] gi|270153819|gb|ACZ61657.1| ATP synthase F1, beta subunit [Dehalococcoides sp. VS] Length = 464 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + K + +M I P + + +TG++VID+ P G Sbjct: 85 LGRIFNVLGEPLDNRGDV-KSEKTMPIHRSAPAMDELESSAQVLETGLKVIDLIAPFARG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG G+G+GK+ L+ R+ + S+ VGER RE + + L K+ Sbjct: 144 GKIGALGGAGVGKTVLIQELIRNIATEHEGFSVFAGVGERSREGNDLWHEMEDSGVLPKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P +R LT +T+AEYF + +VLL +D+I R+ + E++ G + Sbjct: 204 TMVFGQMNELPAVRLRIALTGLTMAEYFRDEERQDVLLFIDNIYRYTLAGMEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI +++ G+IT+ +V V D++ DP + LD I Sbjct: 264 PSAVGYQPTLATEMGALQERIASTKQ--GSITSFQAVYVPADDYTDPGVVATFGHLDAMI 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L RSLAE+ YP VDPLAS SR+ D +E K+ + ++ R+++ +D+ I G Sbjct: 322 ALERSLAEQALYPAVDPLASNSRILDPQVVGEEHYKVARDVQKVLQRYKDLQDVIAILG 380 >gi|225630028|ref|YP_002726819.1| ATP synthase F1, beta subunit [Wolbachia sp. wRi] gi|254808174|sp|C0R5I6|ATPB_WOLWR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|225592009|gb|ACN95028.1| ATP synthase F1, beta subunit [Wolbachia sp. wRi] Length = 475 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 108/337 (32%), Positives = 176/337 (52%), Gaps = 28/337 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GR+ N +G+ ID L KG ++E + + PP+ QR+ E+ TGI+VID+ P Sbjct: 86 LGRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLK 144 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 145 GGKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVI 202 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 203 NINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAG 262 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP Sbjct: 263 SEISALLGRIPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPA 320 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + S LD VL+R +AE G YP VDPL S S+ L+ + + K+ S + ++ ++ Sbjct: 321 TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYKVASEVKRILQTYKS 380 Query: 386 TRDIRLIGGYRPGVD---LILDKAVHQVPIIYDFLKQ 419 +DI I G D +I+D+A I FL Q Sbjct: 381 LQDIIAILGMDELSDEDKIIVDRARK----IQKFLSQ 413 >gi|299135452|ref|ZP_07028642.1| ATP synthase F1, beta subunit [Afipia sp. 1NLS2] gi|298589860|gb|EFI50065.1| ATP synthase F1, beta subunit [Afipia sp. 1NLS2] Length = 476 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+P+D + K + + I + P + + TGI+V+D+ P G Sbjct: 90 GRIINVIGEPVDEGGPV-KAEGTRAIHQEAPAYTEQSTDAEILVTGIKVVDLLAPYAKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211 +IG+F G+G+GK+ L+ + + + VGER RE EFIE + G Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R L+ +TIAE F KG +VL +D+I RF + E++ Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTIAEDFRDKGQDVLFFVDNIFRFTQAGSEVSA 268 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +++ L ERI + KG+IT++ ++ V D+ DP + + Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSIQAIYVPADDLTDPAPATSFAH 326 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD LNRS+AE+G YP VDPL S SR+ DE V+ + ++ R++ +DI Sbjct: 327 LDATTTLNRSIAEKGIYPAVDPLDSTSRMLSPLVVGDEHYAVARQVQQILQRYKALQDII 386 Query: 391 LIGG 394 I G Sbjct: 387 AILG 390 >gi|22537026|ref|NP_687877.1| F0F1 ATP synthase subunit beta [Streptococcus agalactiae 2603V/R] gi|76786779|ref|YP_329608.1| F0F1 ATP synthase subunit beta [Streptococcus agalactiae A909] gi|76799295|ref|ZP_00781462.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 18RS21] gi|77406467|ref|ZP_00783523.1| ATP synthase F1, beta subunit [Streptococcus agalactiae H36B] gi|77407968|ref|ZP_00784718.1| ATP synthase F1, beta subunit [Streptococcus agalactiae COH1] gi|77410721|ref|ZP_00787080.1| ATP synthase F1, beta subunit [Streptococcus agalactiae CJB111] gi|77414099|ref|ZP_00790267.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 515] gi|81845446|sp|Q8E072|ATPB_STRA5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573760|sp|Q3K1J5|ATPB_STRA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|22533883|gb|AAM99749.1|AE014231_7 ATP synthase F1, beta subunit [Streptococcus agalactiae 2603V/R] gi|76561836|gb|ABA44420.1| ATP synthase F1, beta subunit [Streptococcus agalactiae A909] gi|76585355|gb|EAO61946.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 18RS21] gi|77159851|gb|EAO70994.1| ATP synthase F1, beta subunit [Streptococcus agalactiae 515] gi|77163257|gb|EAO74209.1| ATP synthase F1, beta subunit [Streptococcus agalactiae CJB111] gi|77173426|gb|EAO76545.1| ATP synthase F1, beta subunit [Streptococcus agalactiae COH1] gi|77174936|gb|EAO77749.1| ATP synthase F1, beta subunit [Streptococcus agalactiae H36B] gi|319744882|gb|EFV97216.1| ATP synthase F1 sector beta subunit [Streptococcus agalactiae ATCC 13813] Length = 468 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDAIDLEEPFAEDAERQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR DE ++ + + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALTPEIVGDEHYEVATEVQRVLQRYRELQDIIAILG 385 >gi|197302622|ref|ZP_03167676.1| hypothetical protein RUMLAC_01351 [Ruminococcus lactaris ATCC 29176] gi|197298204|gb|EDY32750.1| hypothetical protein RUMLAC_01351 [Ruminococcus lactaris ATCC 29176] Length = 467 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 170/325 (52%), Gaps = 14/325 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + + D ++ + PP Q V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGETIDNGEPIT--DSKKWVIHREPPTFEEQSPVVEILETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ R+ + I + VGER RE + + L K+ Sbjct: 144 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWTEMKASGVLDKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G + Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFRDEQHQNVLLFIDNIFRFTQAGSEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R + E+G YP VDPL S SR+ + +E ++ + + ++ +++E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYEVANKVIAILQKYKELQDIIAILGM 381 Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ 419 D DKA V + I FL Q Sbjct: 382 EELSD--EDKATVMRARKIQRFLSQ 404 >gi|167747404|ref|ZP_02419531.1| hypothetical protein ANACAC_02124 [Anaerostipes caccae DSM 14662] gi|317471135|ref|ZP_07930506.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA] gi|167652766|gb|EDR96895.1| hypothetical protein ANACAC_02124 [Anaerostipes caccae DSM 14662] gi|316901350|gb|EFV23293.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA] Length = 465 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 167/314 (53%), Gaps = 14/314 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR+ N LG PID + + + + + PA Q E + +TGI+V+D+ P G Sbjct: 90 GRMFNVLGDPID--NKPAPENAKRQPIHRKAPAFKDQSTETEVLETGIKVVDLLCPYQKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ R+ + + + VGER RE + + + K+ Sbjct: 148 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMSESGVIDKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAE F +G +VLL +D+I RF + E++ G + Sbjct: 208 AMVFGQMNEPPGARMRVGLTGLTIAENFRDEGGKDVLLFIDNIFRFTQAGSEVSALLGRM 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKDGSITSVQAVYVPADDLTDPAPATTFAHLDATT 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R++ E+G YP VDPL S SR+ D +E ++ + ++ R++E +DI I G Sbjct: 326 VLSRAIVEQGIYPAVDPLESTSRILDPKIVGEEHYQVARGVQEILQRYKELQDIIAILGM 385 Query: 396 RPGVD---LILDKA 406 D LI+D+A Sbjct: 386 DELSDEEKLIVDRA 399 >gi|154503952|ref|ZP_02041012.1| hypothetical protein RUMGNA_01778 [Ruminococcus gnavus ATCC 29149] gi|153795379|gb|EDN77799.1| hypothetical protein RUMGNA_01778 [Ruminococcus gnavus ATCC 29149] Length = 464 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 106/325 (32%), Positives = 171/325 (52%), Gaps = 14/325 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + + D ++ + PP Q V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGETIDNGEQIE--DAEKWVIHREPPTFEDQSPVVEILETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ R+ + I + VGER RE + + L+K+ Sbjct: 144 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLEKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G + Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFRDEQHQNVLLFIDNIFRFTQAGSEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R + E+G YP VDPL S SR+ + +E ++ + + ++ +++E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYEVANKVIAILQKYKELQDIIAILGM 381 Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ 419 D DKA V + I FL Q Sbjct: 382 EELSD--EDKATVMRARKIQRFLSQ 404 >gi|25010936|ref|NP_735331.1| F0F1 ATP synthase subunit beta [Streptococcus agalactiae NEM316] gi|81845628|sp|Q8E5U8|ATPB_STRA3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|23095315|emb|CAD46525.1| H+-transporting ATP synthase beta chain [Streptococcus agalactiae NEM316] Length = 468 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDAIDLEEPFAEDAERQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR DE ++ + + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALTPEIVGDEHYEVATEVQRVLQRYRELQDIIAILG 385 >gi|114567888|ref|YP_755042.1| F0F1 ATP synthase subunit beta [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317245|sp|Q0AUD3|ATPB_SYNWW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|114338823|gb|ABI69671.1| Sodium-transporting two-sector ATPase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 476 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 158/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+P+D + D EI K P + + + +TGI+V D+ P G Sbjct: 99 GRILNVLGQPVDEAGPVNASDY-WEIHRKPPALVEQLPATQQLETGIKVADLICPYAKGG 157 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ ++ R+ ++ + + VGER RE + + + K Sbjct: 158 KIGLFGGAGVGKTVIIQELIRNIAYEHGGYSVFTGVGERTREGNDLWGEMTESGVIDKCA 217 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 ++ +E P R LT +T+AEYF G +VL+ +D+I RFA + E++ G +P Sbjct: 218 LIFGQMNEPPGARLRVGLTGMTVAEYFRDFSGLDVLIFIDNIFRFAQAGNEVSALLGRMP 277 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +++ L ERI + KG+IT+ +V V D+ DP + + LD V Sbjct: 278 SAVGYQPTLATDMGYLQERI--TSTRKGSITSAQAVYVPADDLTDPAPATTFAHLDATTV 335 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R+++E G YP VDPL S SR+ D D+ + ++ R++E +DI I G Sbjct: 336 LSRAISELGIYPAVDPLDSTSRILDPQVVGDKHYDTARGVQKILQRYKELQDIIAILG 393 >gi|116671151|ref|YP_832084.1| F0F1 ATP synthase subunit beta [Arthrobacter sp. FB24] gi|190358255|sp|A0JY64|ATPB_ARTS2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116611260|gb|ABK03984.1| ATP synthase F1, beta subunit [Arthrobacter sp. FB24] Length = 484 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LGKP+D D+S + I K P + + +TGI+VID+ TP G Sbjct: 103 GHIFNVLGKPLDVDESEIQASDHWAIHRKAPAFATLEGSTEMLETGIKVIDLLTPYIKGG 162 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVLKDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ ++ V D++ DP + + LD Sbjct: 283 SAVGYQPNLADEMGLLQERITSTKGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR+ D + D + ++ + +E +DI I G Sbjct: 341 LSREIASRGLYPAVDPLTSTSRILDPQYIGKDHYNTAVRVKQILQKNKELQDIIAILG 398 >gi|313904303|ref|ZP_07837681.1| ATP synthase F1, beta subunit [Eubacterium cellulosolvens 6] gi|313470853|gb|EFR66177.1| ATP synthase F1, beta subunit [Eubacterium cellulosolvens 6] Length = 462 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 103/304 (33%), Positives = 164/304 (53%), Gaps = 19/304 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG ID KGD++ EI K P M+++ V++ +TGI+VID+ P Sbjct: 85 LGRLFNVLGDTIDN-----KGDITDSEMWEIHRKPPKFMDQKPVQEILETGIKVIDLIAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L+ R S+ I + VGER RE + + Sbjct: 140 YAKGGKVGLFGGAGVGKTVLIQELIRNVASEHGGYSIFTGVGERSREGNDLWSEMTESGV 199 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272 +K + +V +E P R T +T+AEYF + +VLL +D+I RF + E+++ Sbjct: 200 IKNTALVFGQMNEPPGSRMRVAETGLTMAEYFRDVQHKDVLLFIDNIFRFVQAGSEVSSL 259 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L ERI + ++G++T+V +V V D+ DP + + L Sbjct: 260 LGRMPSAVGYQPTLANEMGELQERIAST--QEGSVTSVQAVYVPADDLTDPAPATTFAHL 317 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRL--ADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 D VL+R + E+G YP VDPLAS SR+ D A + L +L +++E +DI Sbjct: 318 DATTVLSRKIVEQGIYPAVDPLASNSRILEPDIVGQAHYDTAQTVLKYL-QKYKELQDII 376 Query: 391 LIGG 394 I G Sbjct: 377 AILG 380 >gi|313903636|ref|ZP_07837026.1| ATP synthase F1 subcomplex beta subunit [Thermaerobacter subterraneus DSM 13965] gi|313466189|gb|EFR61713.1| ATP synthase F1 subcomplex beta subunit [Thermaerobacter subterraneus DSM 13965] Length = 469 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PIDG + + I P + + +TGI+VID+ P G Sbjct: 92 LGRMFNVLGEPIDGKEP-PQAKKRYPIHRPAPDVADVNPATEILETGIKVIDLICPFARG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + + + + VGER RE + + L K+ Sbjct: 151 GKVGLFGGAGVGKTVIIMELIHNIAYKHGGFSVFAGVGERTREGNDLYHELKESGVLDKT 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT + +AEYF +G ++LL +D+I RF + E++ G + Sbjct: 211 ALVFGQMNEPPGARLRVGLTGLAMAEYFRDEEGQDLLLFIDNIFRFTQAGSEVSALLGRM 270 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + KG+IT+V +V V D++ DP + + LD + Sbjct: 271 PSAVGYQPTLATEMGNLQERI--TTTRKGSITSVQAVYVPADDYTDPAPVTTFAHLDSTV 328 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R++AE G YP VDPLAS SR+ D E ++ + ++ R+++ +DI I G Sbjct: 329 RLERAIAERGIYPAVDPLASTSRILDPNIVGQEHYEVARGVQQVLQRYKDLQDIIAILG 387 >gi|291549096|emb|CBL25358.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus torques L2-14] Length = 464 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 107/325 (32%), Positives = 172/325 (52%), Gaps = 14/325 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + + D ++ + PP Q V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGETIDNGEPIT--DSKKWVIHRQPPTFEDQSPVVEILETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ R+ + I + VGER RE + + E L+K+ Sbjct: 144 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLEKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G + Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFRDEQHQNVLLFIDNIFRFTQAGSEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R + E+G YP VDPL S SR+ + +E ++ + + ++ +++E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYEVANKVIAILQKYKELQDIIAILGM 381 Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ 419 D DKA V + I FL Q Sbjct: 382 EELSD--EDKATVMRARKIQKFLSQ 404 >gi|289423325|ref|ZP_06425133.1| ATP synthase F1, beta subunit [Peptostreptococcus anaerobius 653-L] gi|289156256|gb|EFD04913.1| ATP synthase F1, beta subunit [Peptostreptococcus anaerobius 653-L] Length = 465 Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 159/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG+ ID D+ D+ + + K P + + +TGI+V+D+ P Sbjct: 87 LGRVFNVLGEAIDQKDA--PTDVEVSPIHKPAPKYDELETKAEILETGIKVVDLLAPYLK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + +KK Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYGEMTESGVIKK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ G Sbjct: 205 TAMVFGQMNEPPGARMRVALTGLTMAEYFRDQAGQDVLLFIDNIFRFTQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + S LD Sbjct: 265 MPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAK 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++ G YP VDPL S SR+ D E ++ + ++ R++E +DI I G Sbjct: 323 TVLSRQISSLGIYPAVDPLESTSRVLDPNIVGQEHYEVARGVQSILQRYKELQDIIAILG 382 >gi|329767908|ref|ZP_08259421.1| ATP synthase subunit beta [Gemella haemolysans M341] gi|328838614|gb|EGF88215.1| ATP synthase subunit beta [Gemella haemolysans M341] Length = 471 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ +D + G I + P + +TGI+VID+ P G Sbjct: 90 LGRVFNVLGEAVDHGEEAGAEVRKDSIHKEAPTFEELSTHVEVLETGIKVIDLLAPYIKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + +S+ VGER RE + + E + K+ Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINKT 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRM 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ RL ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 270 PSAVGYQPTLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L RSL E G YP VDPLAS SR LA + + ++ + + + ++ E +DI I G Sbjct: 328 NLERSLTEMGIYPAVDPLASTSRALAPEIVGEEHYQVATRIQRTLQKYRELQDIIAILG 386 >gi|329768922|ref|ZP_08260349.1| ATP synthase subunit beta [Gemella sanguinis M325] gi|328836639|gb|EGF86297.1| ATP synthase subunit beta [Gemella sanguinis M325] Length = 471 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ +D + G ++ E + K P + +TGI+VID+ P Sbjct: 90 LGRVFNVLGEAVDHGEEPG-AEVQKESIHKEAPTFEELSTHVEVLETGIKVIDLLAPYIK 148 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + E + K Sbjct: 149 GGKIGLFGGAGVGKTVLIQELINNVAQQHGGLSVFTGVGERTREGNDLYYEMKDSGVINK 208 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 209 TAMVFGQMNEPPGARMRVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 268 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ RL ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 MPSAVGYQPTLATEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 326 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R+L E G YP VDPLAS SR LA + + ++ + + + ++ E +DI I G Sbjct: 327 TNLERALTEMGIYPAVDPLASTSRALAPEIVGEEHYQVATRIQRTLQKYRELQDIIAILG 386 >gi|54298270|ref|YP_124639.1| F0F1 ATP synthase subunit beta [Legionella pneumophila str. Paris] gi|53752055|emb|CAH13481.1| hypothetical protein lpp2328 [Legionella pneumophila str. Paris] Length = 474 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 165/314 (52%), Gaps = 12/314 (3%) Query: 84 GDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G +V+ G P + C GR++N G+P+DG L + ++++K P E Sbjct: 85 GLIVYDQGTSLQIPVSKECLGRLLNIFGEPLDGGPPLETNEYR-DVLAKSEPLQMTSTQE 143 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERG 199 +TGI+VID+ P G + G+F G+G+GK+ LL M A + + VGER Sbjct: 144 TILETGIKVIDLLCPFVRGSKTGLFGGAGVGKTVLLMELMHAIIQLHQGTSVFAGVGERI 203 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257 RE E + + K+++V DESP +R L+A+T AEY + G VL ++D Sbjct: 204 REGHELWHEMKSAGVMDKTLMVFGQMDESPGVRFRTGLSALTYAEYLRDTLGHEVLFLVD 263 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + EI+ G +P + GY ++ +E+ L ER+ + KG +T+V +V V Sbjct: 264 NIYRFVQAGSEISGLLGRMPASVGYQPTLMTEIAELEERM--TSTAKGAVTSVQAVYVPA 321 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT 377 D+ +DP + + LD IVL+R+ A +G YP VDPLAS S+ DK + ++ Sbjct: 322 DDMSDPAVTGIITHLDSIIVLSRAQAGKGIYPAVDPLASKSQFMDKILLGERHYSIAQAV 381 Query: 378 --HLIHRFEETRDI 389 HL H ++E D+ Sbjct: 382 REHLEH-YQELEDM 394 >gi|261409677|ref|YP_003245918.1| ATP synthase F1 subunit beta [Paenibacillus sp. Y412MC10] gi|329923666|ref|ZP_08279091.1| ATP synthase F1, beta subunit [Paenibacillus sp. HGF5] gi|261286140|gb|ACX68111.1| ATP synthase F1, beta subunit [Paenibacillus sp. Y412MC10] gi|328941143|gb|EGG37443.1| ATP synthase F1, beta subunit [Paenibacillus sp. HGF5] Length = 466 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/303 (32%), Positives = 163/303 (53%), Gaps = 11/303 (3%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 + GRV N LG+PID ++ +++ I + P + +TGI+VID+ P Sbjct: 87 SATLGRVFNVLGEPIDNAGAV-VSEVNNPIHREAPAYDELSTQAEMLETGIKVIDLLAPY 145 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-- 213 G +IG+F G+G+GK+ + + + IS+ VGER RE + + + D+ Sbjct: 146 QKGGKIGLFGGAGVGKTVAIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSGV 204 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 + K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 205 INKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGKDVLLFIDNIFRFTQAGSEVSAL 264 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ SE+ RL ERI + +KG++T++ ++ V D++ DP + + L Sbjct: 265 LGRMPSAVGYQPTLASEMGRLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHL 322 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRL 391 D L R ++E G YP VDPLAS SR LA + + + + ++ R+ E +DI Sbjct: 323 DATTNLERKISEMGIYPAVDPLASSSRILAPEIVGEEHYNVAQGVKKILARYNELQDIIA 382 Query: 392 IGG 394 I G Sbjct: 383 ILG 385 >gi|167467518|ref|ZP_02332222.1| flagellum-specific ATP synthase [Yersinia pestis FV-1] Length = 194 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 79/174 (45%), Positives = 105/174 (60%) Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 I+DS+TR+A REIA GE P +GYP SVF++LP L+ER G G+ITA +VL Sbjct: 9 IMDSLTRYATKEREIALAIGEPPATKGYPPSVFAKLPALVERAGNGVSGGGSITAFYTVL 68 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 +GD+ DPIADS R+ILDGH+VL+R LAE G YP +D AS+SR D V Sbjct: 69 TEGDDQQDPIADSARAILDGHVVLSRRLAESGHYPAIDIEASISRAMTSLIDDDHYSRVR 128 Query: 375 SLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSED 428 L+ ++ RD+ +G Y G D +LDKA+ P + FL+Q + SS D Sbjct: 129 QFKQLLASYQRNRDLISVGAYAAGSDPLLDKAIALYPQMEAFLQQGMFERSSFD 182 >gi|295697747|ref|YP_003590985.1| ATP synthase F1, beta subunit [Bacillus tusciae DSM 2912] gi|295413349|gb|ADG07841.1| ATP synthase F1, beta subunit [Bacillus tusciae DSM 2912] Length = 472 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 102/329 (31%), Positives = 169/329 (51%), Gaps = 16/329 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID + +L+ I P + + F+TGI+V+D+ P Sbjct: 92 ATLGRIFNVLGQPIDEQGPVAT-ELTHPIHRPAPSFEEQSTKVEIFETGIKVVDLLAPYI 150 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ L+ + + + VGER RE + + + Sbjct: 151 KGGKVGLFGGAGVGKTVLIQELIHNIAKQHGGFSVFAGVGERTREGNDLYHEMRESGVID 210 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+V+V +E P R LT +T AEYF +G +VLL +D+I RF + E++ G Sbjct: 211 KTVMVFGQMNEPPGARMRVGLTGLTFAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLG 270 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG+IT++ ++ V D++ DP + + LD Sbjct: 271 RMPSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATTFAHLDA 328 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R ++E G YP VDPLAS SR L+ + + + ++ R+ E +DI I Sbjct: 329 TTNLERKISELGIYPAVDPLASTSRALSPDVVGQEHYDVARGVQQVLQRYRELQDIIAI- 387 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQ 419 G+D + D+ V + I +FL Q Sbjct: 388 ---LGMDELTDEDKLTVARARKIQNFLSQ 413 >gi|312371563|gb|EFR19714.1| hypothetical protein AND_21925 [Anopheles darlingi] gi|312371564|gb|EFR19715.1| hypothetical protein AND_21926 [Anopheles darlingi] Length = 503 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 166/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + + +LS I ++ P + ++ TGI+V+ Sbjct: 107 IRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFIEMSVEQEILVTGIKVV 165 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 166 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 224 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 225 MIEGGVISLKDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 284 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 285 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 342 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 343 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 402 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 403 LQDYKSLQDIIAILG 417 >gi|299753037|ref|XP_001833020.2| ATP synthase subunit beta [Coprinopsis cinerea okayama7#130] gi|298410114|gb|EAU88709.2| ATP synthase subunit beta [Coprinopsis cinerea okayama7#130] Length = 483 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 166/306 (54%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + KG+ + I + P +++ + +TGI+V+D+ P G Sbjct: 96 LGRIINVIGEPIDERGPI-KGEKMLPIHADPPAFVDQSTTAEVLETGIKVVDLLAPYARG 154 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---- 210 +IG+F G+G+GK+ L+ + S+ VGER RE E IE + Sbjct: 155 GKIGLFGGAGVGKTVLIQELINNVAKAHGGFSIFCGVGERTREGNDLYHEMIETGVIQLE 214 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 215 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 272 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 273 SALLGRIPSAVGYQPTLSTDMGAMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTF 330 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE G YP VDPL S SR+ D E ++ +++ ++ ++ +D Sbjct: 331 AHLDATTVLSRSIAELGIYPAVDPLDSKSRMLDPRIVGQEHYEVATAVQKILQDYKSLQD 390 Query: 389 IRLIGG 394 I I G Sbjct: 391 IIAILG 396 >gi|21672302|ref|NP_660369.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|4033705|sp|Q07232|ATPB_BUCAP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|2827018|gb|AAC38110.1| ATP synthase subunit beta [Buchnera aphidicola] gi|21622900|gb|AAM67580.1| ATP synthase beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 466 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 105/336 (31%), Positives = 165/336 (49%), Gaps = 12/336 (3%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLS-- 125 IV +G + G +V G + ++ GR+IN LGK ID L D S Sbjct: 52 IVRTIAMGSTNGLKRGLIVIDLGHYIKVPVGQATLGRIINVLGKTIDNKGPLKNLDNSKL 111 Query: 126 --MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 EI P + ++ +TGI+VID+ P G ++G+F G+G+GK+ + R Sbjct: 112 EYWEIHRSAPSYQEQASSQEILETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIR 171 Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239 + + + + VGER RE +F + L K +V +E P R T + Sbjct: 172 NIAIEHSGYSVFTGVGERTREGNDFYHEMKDSKVLDKVSLVYGQMNEPPGNRLRVAFTGL 231 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 TIAE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI Sbjct: 232 TIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI-- 289 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + ++G+IT+V +V V D+ DP + + LD + L+R +A G YP +DPL S SR Sbjct: 290 TSTKEGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIAALGIYPAIDPLNSTSR 349 Query: 360 LADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D DE + ++ R++E +DI I G Sbjct: 350 QLDPYIVGDEHYDTARGVQSILQRYQELKDIIAILG 385 >gi|291537138|emb|CBL10250.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis M50/1] Length = 465 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 103/316 (32%), Positives = 160/316 (50%), Gaps = 9/316 (2%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D V G + GR+ N LG PID D G I P + ++ Sbjct: 74 DAVATGGPISVPVGENTLGRMFNVLGDPIDEIDPPA-GVEKWPIHRPAPAFEEQATSQEM 132 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE 201 +TGI+V+D+ P G +IG+F G+G+GK+ L+ + + + + VGER RE Sbjct: 133 LETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFTGVGERTRE 192 Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSI 259 + + E + K+ +V +E P R LT +T+AEYF KG +VLL +D+I Sbjct: 193 GNDLYYEMKESGVIDKTTMVFGQMNEPPGARMRVALTGLTMAEYFRDKGGKDVLLFIDNI 252 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ Sbjct: 253 FRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADD 310 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 DP + + LD VL RS+AE G YP VDPL S SR+ D E ++ + Sbjct: 311 LTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLGSTSRILDPRIVGQEHFEVARGVQE 370 Query: 379 LIHRFEETRDIRLIGG 394 ++ +++E +DI I G Sbjct: 371 ILQKYKELQDIIAILG 386 >gi|240143395|ref|ZP_04741996.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82] gi|257204664|gb|EEV02949.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82] gi|291540378|emb|CBL13489.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis XB6B4] Length = 465 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 103/316 (32%), Positives = 160/316 (50%), Gaps = 9/316 (2%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D V G + GR+ N LG PID D G I P + ++ Sbjct: 74 DAVAAGGPISVPVGENTLGRMFNVLGDPIDEIDPPA-GVEKWPIHRPAPAFEEQATSQEM 132 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE 201 +TGI+V+D+ P G +IG+F G+G+GK+ L+ + + + + VGER RE Sbjct: 133 LETGIKVVDLLCPYQKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSVFTGVGERTRE 192 Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSI 259 + + E + K+ +V +E P R LT +T+AEYF KG +VLL +D+I Sbjct: 193 GNDLYYEMKESGVIDKTTMVFGQMNEPPGARMRVALTGLTMAEYFRDKGGKDVLLFIDNI 252 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ Sbjct: 253 FRFTQAGSEVSALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADD 310 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 DP + + LD VL RS+AE G YP VDPL S SR+ D E ++ + Sbjct: 311 LTDPAPATTFAHLDATTVLERSIAELGIYPAVDPLGSTSRILDPRIVGQEHFEVARGVQE 370 Query: 379 LIHRFEETRDIRLIGG 394 ++ +++E +DI I G Sbjct: 371 ILQKYKELQDIIAILG 386 >gi|222475194|ref|YP_002563610.1| ATP synthase beta chain (atpD) [Anaplasma marginale str. Florida] gi|222419331|gb|ACM49354.1| ATP synthase beta chain (atpD) [Anaplasma marginale str. Florida] Length = 488 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 111/342 (32%), Positives = 180/342 (52%), Gaps = 20/342 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + +S GD G ++P GRV + LG+PIDG S+ D+ Sbjct: 69 MVRCVAMGSTDSLSRGDKFISTGNQMMAPVGRGTLGRVFDVLGRPIDGLGSVSS-DVEFR 127 Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182 + P+++ QRV + TGI+V+D+ P G ++G+F G+G+GK+ L+S A Sbjct: 128 PIHAKAPSLSEQRVAAEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNVA 187 Query: 183 RSDCFDKVIISLVGERGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMA 234 R+ V VGER RE RE +E + D KS V+V +E P R Sbjct: 188 RAHKGFSVFAG-VGERTREGNDLYREMVESGVISRDEPSKSQAVLVYGQMNEPPGARMRV 246 Query: 235 PLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 LTA+T+AEYF S+G +VL +D++ RF S E++ G +P A GY ++ +E+ + Sbjct: 247 ALTALTMAEYFRDSEGQDVLFFVDNVFRFTQSGSEVSALLGRIPSAVGYQPTLAAEMGAM 306 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 ERI + G+IT+V ++ V D+ DP + + LD VL+R ++E G YP VDP Sbjct: 307 QERI--TSTNTGSITSVQAIYVPADDLTDPAPAASFAHLDSTTVLSRQISELGIYPAVDP 364 Query: 354 LASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L S S+ L+ + ++ ++ + ++ ++ +DI I G Sbjct: 365 LESTSQALSPEVVGSEHYEVAQEVKRILQTYKSLQDIIAILG 406 >gi|1168569|sp|P42006|ATPB_BACST RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|534854|dbj|BAA07255.1| ATPase subunit beta [Geobacillus stearothermophilus] Length = 473 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/331 (32%), Positives = 171/331 (51%), Gaps = 17/331 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+PID + + D + + + P E + +TGI+VID+ P Sbjct: 90 VTLGRVFNVLGEPIDLEGDI-PADARRDPIHRPAPKFEELATEVEILETGIKVIDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLV---GERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + + IS+ GER RE + + + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGFGERTREGNDLYHEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+ RF + E++ Sbjct: 209 SKTGMVFGQMNEPPGPRMRVALTGLTMAEYFRDEQGQDVLLFIDNNFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + KG+IT++ ++ V D++ DP + S LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTAKGSITSIQAIYVPADDYTDPAPATTFSHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R LAE G YP VDPLAS SR LA + + ++ + + R++E +DI I Sbjct: 327 ATTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAI 386 Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ VH+ I FL Q+ Sbjct: 387 ----LGMDELSDEDKLVVHRARRIQFFLSQN 413 >gi|112791412|gb|ABI21976.1| ATP synthase beta subunit [Erwinia mallotivora] Length = 420 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 102/304 (33%), Positives = 159/304 (52%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|416679|sp|Q03234|ATPB_LACCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|43972|emb|CAA45840.1| ATPase (beta-subunit) [Lactobacillus casei] Length = 470 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 156/294 (53%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG PID ++L I P + + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDPIDDGEALDLNHRRDSIHRDAPKFEDLNTSSEILETGIKVIDLLEPYLRG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++ + Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAEEHGGISVFTGVGERTREGNDLYFEMKESGVMENT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPRTTFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L R L E+G YP VDPL +S S L + + K+ + + ++ R+ E +DI Sbjct: 327 NLERRLTEQGIYPAVDPLESSSSALTPEIVGEEHYKVATEVQQVLQRYRELQDI 380 >gi|331083911|ref|ZP_08333020.1| ATP synthase subunit beta [Lachnospiraceae bacterium 6_1_63FAA] gi|330403336|gb|EGG82896.1| ATP synthase subunit beta [Lachnospiraceae bacterium 6_1_63FAA] Length = 462 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 159/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+ ID + L + ++ + PPA + Q V + +TGI+VID+ P Sbjct: 85 LGRLFNVLGETIDKGEQLDNAE--HWVIHRDPPAFDEQSPVVEILETGIKVIDLLAPYAK 142 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + I + VGER RE + + L+K Sbjct: 143 GGKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLEK 202 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF K NVLL +D+I RF + E++ G Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDKEHQNVLLFIDNIFRFTQAGSEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + E ++ + + +++E +DI I G Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEADVVGQEHYEVARKVQEYLQKYKELQDIIAILG 380 >gi|300214400|gb|ADJ78816.1| ATP synthase subunit beta (F-ATPase subunit beta) (ATP synthase F1 sector subunit beta) [Lactobacillus salivarius CECT 5713] Length = 468 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 155/294 (52%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + I P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGNTIDNGPEFDEDHPRNPIHRDAPKYDQLSTGIEILETGIKVIDLLAPYIKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E L+K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKESGVLEKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPLAS S L + + ++ + + H++ R+ E +DI Sbjct: 325 NLERSLTQQGIYPAVDPLASTSSALTPEIVGEEHYEVATEVQHVLQRYRELQDI 378 >gi|90961576|ref|YP_535492.1| F0F1 ATP synthase subunit beta [Lactobacillus salivarius UCC118] gi|227890662|ref|ZP_04008467.1| H(+)-transporting two-sector ATPase [Lactobacillus salivarius ATCC 11741] gi|301299952|ref|ZP_07206179.1| ATP synthase F1, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|118573690|sp|Q1WUC6|ATPB_LACS1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|90820770|gb|ABD99409.1| ATP synthase beta chain [Lactobacillus salivarius UCC118] gi|227867600|gb|EEJ75021.1| H(+)-transporting two-sector ATPase [Lactobacillus salivarius ATCC 11741] gi|300852434|gb|EFK80091.1| ATP synthase F1, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 468 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 155/294 (52%), Gaps = 8/294 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + I P + +TGI+VID+ P G Sbjct: 87 LGRVFNVLGNTIDNGPEFDEDHPRNPIHRDAPKYDQLSTGIEILETGIKVIDLLAPYIKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E L+K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIHNIAQEHNGISVFTGVGERTREGNDLYFEMKESGVLEKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRI 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPLAS S L + + ++ + + H++ R+ E +DI Sbjct: 325 NLERSLTQQGIYPAVDPLASTSSALTPEIVGEEHYEVATEVQHVLQRYRELQDI 378 >gi|302388467|ref|YP_003824289.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1] gi|302199095|gb|ADL06666.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1] Length = 464 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 163/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID L G ++ + PPA Q V + +TGI+VID+ P G Sbjct: 87 GRLFNVLGETIDHGGDLEGG--PQWVIHRDPPAFEEQSPVAEILETGIKVIDLLAPYAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216 +IG+F G+G+GK+ L+ + + I + VGER RE + + +G++ + K Sbjct: 145 GKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWTE-MGESGVISK 203 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G Sbjct: 204 TALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHKNVLLFIDNIFRFTQAGSEVSALLGR 263 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G++T+V +V V D+ DP + + LD Sbjct: 264 MPSAVGYQPTLATEMGELQERI--TSTKNGSVTSVQAVYVPADDLTDPAPATTFAHLDAT 321 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPLAS SR+ + +E ++ + ++ +++E +DI I G Sbjct: 322 TVLSRKIVEQGIYPAVDPLASNSRILEPDVVGEEHYEVARKVQEILQKYKELQDIIAILG 381 >gi|146313762|ref|YP_001178836.1| F0F1 ATP synthase subunit beta [Enterobacter sp. 638] gi|166990369|sp|A4WGF5|ATPB_ENT38 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|145320638|gb|ABP62785.1| ATP synthase F1 subcomplex beta subunit [Enterobacter sp. 638] Length = 460 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ D I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGQPIDMKGDIGEED-RWAIHRAAPSYEELSSSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + L+ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAILG 379 >gi|257870214|ref|ZP_05649867.1| ATP synthase F1 [Enterococcus gallinarum EG2] gi|257804378|gb|EEV33200.1| ATP synthase F1 [Enterococcus gallinarum EG2] Length = 468 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFPEDAKRSGIHKKAPDFDELSTSTEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S LA + ++ + + H + R+ E +DI I G Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEKHYEVATEVQHALQRYRELQDIIAILG 385 >gi|11908130|gb|AAG23340.1| ATPase beta subunit [Trypanosoma brucei brucei] Length = 518 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID +G+ L M I + P ++ + TGI+VID+ P C G Sbjct: 119 GRIFNVLGDAIDQRGPVGE-KLRMPIHAVAPKLADQAAEDAVLTTGIKVIDLILPYCKGG 177 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L++ A+ V VGER RE + + + + Sbjct: 178 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 236 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K V+V +E P R +A+T+AEYF +G +VLL +D+I RF + E++ Sbjct: 237 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQDVLLFIDNIFRFTQANSEVSA 296 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +L +L ERI + KG+IT+V +V V D+ DP + S Sbjct: 297 LLGRIPAAVGYQPTLAEDLGQLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 354 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R++AE G YP V+PL SR+ D S D + + ++ ++ E +DI Sbjct: 355 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVISVDHYNVAQDVVQMLTKYRELQDI 413 >gi|163761385|ref|ZP_02168459.1| ATP synthase subunit B [Hoeflea phototrophica DFL-43] gi|162281380|gb|EDQ31677.1| ATP synthase subunit B [Hoeflea phototrophica DFL-43] Length = 517 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 163/306 (53%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D D K + EI P + + + TGI+V+D+ P G Sbjct: 130 LGRIMNVIGEPVD-DAGPIKTKATREIHQDAPSYVEQSTEAEILVTGIKVVDLLAPYAKG 188 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209 +IG+F G+G+GK+ L+ + AR+ V VGER RE E IE + Sbjct: 189 GKIGLFGGAGVGKTVLIMELINNVARAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 247 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G + K+ +V +E P R LT +T+AE+F +G +VL +D+I RF + E+ Sbjct: 248 GGGDGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 307 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + KG+IT+V ++ V D+ DP + Sbjct: 308 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSVQAIYVPADDLTDPAPATSF 365 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R+++E+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 366 AHLDATTVLSRAISEKGIYPAVDPLDSTSRMLDPQIVGEEHYEVARKVQSTLQRYKSLQD 425 Query: 389 IRLIGG 394 I I G Sbjct: 426 IIAILG 431 >gi|107024491|ref|YP_622818.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia AU 1054] gi|116688130|ref|YP_833753.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia HI2424] gi|170731477|ref|YP_001763424.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia MC0-3] gi|171315826|ref|ZP_02905057.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MEX-5] gi|254246698|ref|ZP_04940019.1| hypothetical protein BCPG_01455 [Burkholderia cenocepacia PC184] gi|118573513|sp|Q1BRB0|ATPB_BURCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166201694|sp|A0K2Y3|ATPB_BURCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226739983|sp|B1JSV7|ATPB_BURCC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|105894680|gb|ABF77845.1| ATP synthase F1 subcomplex beta subunit [Burkholderia cenocepacia AU 1054] gi|116646219|gb|ABK06860.1| ATP synthase F1 subcomplex beta subunit [Burkholderia cenocepacia HI2424] gi|124871474|gb|EAY63190.1| hypothetical protein BCPG_01455 [Burkholderia cenocepacia PC184] gi|169814719|gb|ACA89302.1| ATP synthase F1, beta subunit [Burkholderia cenocepacia MC0-3] gi|171099015|gb|EDT43800.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MEX-5] Length = 464 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + D++ I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESDVTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382 >gi|296111398|ref|YP_003621780.1| ATP synthase subunit B [Leuconostoc kimchii IMSNU 11154] gi|295832930|gb|ADG40811.1| ATP synthase subunit B [Leuconostoc kimchii IMSNU 11154] Length = 466 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 155/296 (52%), Gaps = 8/296 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+P+D + ++ I + P + +TGI+VID+ P Sbjct: 85 STLGRVFNVLGEPVDNNGAIADDTPRNSIHREAPKYDELASSTEILETGIKVIDLLAPYV 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + LK Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMEESGVLK 204 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ +V +E P R LT +T+AE F ++G +VLL +D+I RF + E++ G Sbjct: 205 QTAMVYGQMNEPPGARMRVALTGLTMAENFRDNEGKDVLLFIDNIFRFTQAGSEVSALLG 264 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L R+L ++G YP VDPLAS S D E ++ + + + R+ E +DI Sbjct: 323 TTNLERALTQQGIYPAVDPLASTSSALDPQIVGQEHYEVATEVQRTLQRYRELQDI 378 >gi|112791408|gb|ABI21974.1| ATP synthase beta subunit [Erwinia tracheiphila] Length = 421 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 102/304 (33%), Positives = 159/304 (52%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|319947322|ref|ZP_08021555.1| ATP synthase F1 sector beta subunit [Streptococcus australis ATCC 700641] gi|319746564|gb|EFV98824.1| ATP synthase F1 sector beta subunit [Streptococcus australis ATCC 700641] Length = 468 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID +++ + I K P E+ +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEEAFPEDAPRESIHKKAPSFDELSTSEEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V+S + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPDIVGEEHYAVASEVKRVLQRYHELQDIIAILG 385 >gi|298251439|ref|ZP_06975242.1| ATP synthase F1, beta subunit [Ktedonobacter racemifer DSM 44963] gi|297546031|gb|EFH79899.1| ATP synthase F1, beta subunit [Ktedonobacter racemifer DSM 44963] Length = 484 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 158/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+PID +++ ++ I P ++ + + +TGI+VID+ P G Sbjct: 106 GRIFNVLGEPIDNKEAVVDAP-TLPIHRPAPTLEDQTKDSEILETGIKVIDLICPFMKGG 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G F G+G GK+ ++ + + + + VGER RE + + + + + Sbjct: 165 KVGAFGGAGTGKTLIIQELINNIAINHGGYSVFAGVGERTREGNDLYHEMIERGVIDRVA 224 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 ++ +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 225 MIFGQMNEPPGARLRVALTGLTMAEYFRDQEGKDVLLFIDNIFRFTQAGAEVSALLGRMP 284 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +KG+IT++ +V V D++ DP + + LD +V Sbjct: 285 SAVGYQPNLAEEMGELQERI--TSTKKGSITSLQAVFVPADDYTDPAPATTFAHLDSTVV 342 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++AE+ +P VDPLAS SR+ D +E + + R+ E DI I G Sbjct: 343 LDRAIAEQALFPAVDPLASASRILDPQIVGEEHYNTARGVQRTLQRYNELEDIITILG 400 >gi|237736350|ref|ZP_04566831.1| ATP synthase subunit beta [Fusobacterium mortiferum ATCC 9817] gi|229421392|gb|EEO36439.1| ATP synthase subunit beta [Fusobacterium mortiferum ATCC 9817] Length = 466 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 163/311 (52%), Gaps = 17/311 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ GR++N LG+P+D D+ + D + I P ++ + F+TGI+VID Sbjct: 77 KVPVGKAVLGRILNVLGQPVD-DNGPVETDEYLPIHRDAPSFEEQETETEIFETGIKVID 135 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL 210 + P G +IG+F G+G+GK+ L+ + +S+ VGER RE R+ ++ Sbjct: 136 LLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGERTREGRDLYDEMT 195 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268 L K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E Sbjct: 196 ESGVLSKTSLVYGQMNEPPGARLRVALTGLTVAENFRDKEGQDVLLFIDNIFRFTQAGSE 255 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + Sbjct: 256 VSALLGRMPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATT 313 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-----EKKLVSSLTHLIHRF 383 S LD VL+R +A G YP VDPL S S KA SAD + + ++ R+ Sbjct: 314 FSHLDATTVLSRQIASLGIYPAVDPLDSTS----KALSADIVGTEHYNVAREVQEVLQRY 369 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 370 KELQDIIAILG 380 >gi|229064956|ref|ZP_04200254.1| ATP synthase subunit beta [Bacillus cereus AH603] gi|228716257|gb|EEL67969.1| ATP synthase subunit beta [Bacillus cereus AH603] Length = 469 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 177/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + + + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYGVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|72386615|ref|XP_843732.1| ATP synthase beta chain, mitochondrial precursor [Trypanosoma brucei] gi|62175406|gb|AAX69548.1| ATP synthase beta chain, mitochondrial precursor [Trypanosoma brucei] gi|70800264|gb|AAZ10173.1| ATP synthase beta chain, mitochondrial precursor [Trypanosoma brucei brucei strain 927/4 GUTat10.1] gi|261326801|emb|CBH09774.1| ATP synthase F1, beta subunit [Trypanosoma brucei gambiense DAL972] Length = 519 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 156/299 (52%), Gaps = 16/299 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID +G+ L M I + P ++ + TGI+VID+ P C G Sbjct: 119 GRIFNVLGDAIDQRGPVGE-KLRMPIHAVAPKLADQAAEDAVLTTGIKVIDLILPYCKGG 177 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L++ A+ V VGER RE + + + + Sbjct: 178 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 236 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K V+V +E P R +A+T+AEYF +G +VLL +D+I RF + E++ Sbjct: 237 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQDVLLFIDNIFRFTQANSEVSA 296 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +L +L ERI + KG+IT+V +V V D+ DP + S Sbjct: 297 LLGRIPAAVGYQPTLAEDLGQLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 354 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R++AE G YP V+PL SR+ D S D + + ++ ++ E +DI Sbjct: 355 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVISVDHYNVAQDVVQMLTKYRELQDI 413 >gi|114322016|ref|YP_743699.1| F0F1 ATP synthase subunit beta [Alkalilimnicola ehrlichii MLHE-1] gi|122310606|sp|Q0A4M8|ATPB_ALHEH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|114228410|gb|ABI58209.1| ATP synthase F1 subcomplex beta subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 458 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+++ LG+P+D KG + E I P + + +TGI+VID+ P Sbjct: 83 LGRIMDVLGEPVDE-----KGAVETEERWGIHRSAPSFAEQAGGAELLETGIKVIDLLCP 137 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELIRNIATEHAGYSVFAGVGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AEYF +G ++L+ +D+I R+ + E++ Sbjct: 198 LDKVALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDILMFIDNIYRYTLAGTEVSALL 257 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 258 GRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 +VL R +AE G YP VDPL S SR D +E V+ + ++ R++E RDI I Sbjct: 316 ATVVLARGIAELGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGVLQRYKELRDIIAI 375 Query: 393 GG 394 G Sbjct: 376 LG 377 >gi|226196940|ref|ZP_03792518.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|225930923|gb|EEH26932.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan 9] Length = 469 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 16/309 (5%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148 G R+ GR+++ G P GDD D+ + + P + Q+ F TG Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATG 165 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR 203 I+VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE Sbjct: 166 IKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGH 223 Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 E + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ R Sbjct: 224 EMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFR 283 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ Sbjct: 284 FVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFT 341 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 342 DPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVI 401 Query: 381 HRFEETRDI 389 + E +D+ Sbjct: 402 EHYRELQDV 410 >gi|218283211|ref|ZP_03489281.1| hypothetical protein EUBIFOR_01869 [Eubacterium biforme DSM 3989] gi|218216029|gb|EEC89567.1| hypothetical protein EUBIFOR_01869 [Eubacterium biforme DSM 3989] Length = 461 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 159/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG IDG +++ D I K P ++ V + +TGI+VID+ P G Sbjct: 85 LGRLFNVLGDTIDGKEAIDT-DTYWPIHRKPPKFEDQSPVTEVLETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ R S+ I + VGER RE + + E +K + Sbjct: 144 GKIGLFGGAGVGKTVLIQELIRNIASEHGGYSIFTGVGERSREGNDLYTEMSESGVIKNT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +ESP R T +T+AEYF + +VLL +D+I RF + E+++ G + Sbjct: 204 ALVFGQMNESPGARMRVAETGLTMAEYFRDVEHKDVLLFIDNIFRFVQAGSEVSSLLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI S + G++T+V +V V D+ DP + LD Sbjct: 264 PSAVGYQPTLANEMGQLQERI--SSTKNGSVTSVQAVYVPADDLTDPAPATTFEHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ +E + + + +++E +DI I G Sbjct: 322 VLSRKVVEQGIYPAVDPLESSSRILQPDIVGEEHYETAQRVLQYLQKYKELQDIIAILG 380 >gi|149911798|ref|ZP_01900402.1| ATP synthase subunit B [Moritella sp. PE36] gi|149805144|gb|EDM65166.1| ATP synthase subunit B [Moritella sp. PE36] Length = 461 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 11/302 (3%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 AC GR++N LG PIDG ++ D+ EI P + + +TG++VID+ P Sbjct: 84 ACL-GRIVNVLGNPIDGKGAI-PTDVRYEIHRAAPSYEEQSLSNELLETGVKVIDLICPF 141 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDN 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F E Sbjct: 142 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMEEAGV 200 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +++AE F +G +VLL +D+I R+ + E++ Sbjct: 201 LDKVAMVYGQMNEPPGNRLRVALTGLSMAERFRDEGKDVLLFIDNIYRYTLAGTEVSALL 260 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 261 GRMPSAVGYQPTLAEEMGILQERI--TSTKSGSITSIQAVYVPADDLTDPSPATTFAHLD 318 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 +VLNR++A G YP +DPL S SR D E + + ++ R+ E +DI I Sbjct: 319 ATVVLNRNIASMGMYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQGVLQRYTELKDIIAI 378 Query: 393 GG 394 G Sbjct: 379 LG 380 >gi|56416829|ref|YP_153903.1| F0F1 ATP synthase subunit beta [Anaplasma marginale str. St. Maries] gi|81599150|sp|Q5PAN2|ATPB_ANAMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|56388061|gb|AAV86648.1| ATP synthase beta chain [Anaplasma marginale str. St. Maries] Length = 486 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 111/342 (32%), Positives = 180/342 (52%), Gaps = 20/342 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + +S GD G ++P GRV + LG+PIDG S+ D+ Sbjct: 67 MVRCVAMGSTDSLSRGDKFISTGNQMMAPVGRGTLGRVFDVLGRPIDGLGSVSS-DVEFR 125 Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182 + P+++ QRV + TGI+V+D+ P G ++G+F G+G+GK+ L+S A Sbjct: 126 PIHAKAPSLSEQRVAAEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNVA 185 Query: 183 RSDCFDKVIISLVGERGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMA 234 R+ V VGER RE RE +E + D KS V+V +E P R Sbjct: 186 RAHKGFSVFAG-VGERTREGNDLYREMVESGVISRDEPSKSQAVLVYGQMNEPPGARMRV 244 Query: 235 PLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 LTA+T+AEYF S+G +VL +D++ RF S E++ G +P A GY ++ +E+ + Sbjct: 245 ALTALTMAEYFRDSEGQDVLFFVDNVFRFTQSGSEVSALLGRIPSAVGYQPTLAAEMGAM 304 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 ERI + G+IT+V ++ V D+ DP + + LD VL+R ++E G YP VDP Sbjct: 305 QERI--TSTNTGSITSVQAIYVPADDLTDPAPAASFAHLDSTTVLSRQISELGIYPAVDP 362 Query: 354 LASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L S S+ L+ + ++ ++ + ++ ++ +DI I G Sbjct: 363 LESTSQALSPEVVGSEHYEVAQEVKRILQTYKSLQDIIAILG 404 >gi|46909257|gb|AAT06146.1| ATP synthase beta subunit [Mytilus californianus] Length = 348 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 165/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G PID + D + I ++ P + ++ +TGI+V+ Sbjct: 14 IRIPVGPATLGRIINVVGDPIDERGPVNT-DKFLSIHAEAPDFVEMSVTQEVLETGIKVV 72 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE + + Sbjct: 73 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 131 Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 132 MITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIF 191 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ + G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ Sbjct: 192 RFTQAGSEVSASLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAVYVPADDL 249 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ + Sbjct: 250 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSNSRILDPHVVGEEHYTVARNVQKI 309 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 310 LQNYKSLQDIIAILG 324 >gi|293365289|ref|ZP_06612006.1| ATP synthase F1 sector beta subunit [Streptococcus oralis ATCC 35037] gi|307703829|ref|ZP_07640770.1| ATP synthase F1, beta subunit [Streptococcus oralis ATCC 35037] gi|315613058|ref|ZP_07887969.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis ATCC 49296] gi|322374416|ref|ZP_08048930.1| ATP synthase F1, beta subunit [Streptococcus sp. C300] gi|331266489|ref|YP_004326119.1| proton-translocating ATPase, F1 sector,beta-subunit [Streptococcus oralis Uo5] gi|291316739|gb|EFE57175.1| ATP synthase F1 sector beta subunit [Streptococcus oralis ATCC 35037] gi|307622664|gb|EFO01660.1| ATP synthase F1, beta subunit [Streptococcus oralis ATCC 35037] gi|315315168|gb|EFU63209.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis ATCC 49296] gi|321279916|gb|EFX56955.1| ATP synthase F1, beta subunit [Streptococcus sp. C300] gi|326683161|emb|CBZ00779.1| proton-translocating ATPase, F1 sector,beta-subunit [Streptococcus oralis Uo5] Length = 468 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFAEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|86605139|ref|YP_473902.1| F0F1 ATP synthase subunit beta [Synechococcus sp. JA-3-3Ab] gi|118573767|sp|Q2JX57|ATPB_SYNJA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|86553681|gb|ABC98639.1| ATP synthase F1, beta subunit [Synechococcus sp. JA-3-3Ab] Length = 477 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + + + I PP + + F+TGI+VID+ P Sbjct: 96 ATLGRIFNVLGEPVDQGEPVQAKEFA-PIHRSAPPFVELTVKPEPFETGIKVIDLLAPFK 154 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ L+ + + +S+ VGER RE + + L Sbjct: 155 RGGKVGLFGGAGVGKTVLIQELIHNIAEEHSGLSVFAGVGERTREGNDLYNEMKESGVLD 214 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E++ G Sbjct: 215 KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLG 274 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 275 RMPSAVGYQPTLATEMGNLQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFAHLDS 332 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+RSLA +G YP VDPL S S + +E ++ + R++E +DI I Sbjct: 333 TVVLSRSLAAKGIYPAVDPLDSSSTILQADIVGEEHYNTAQAVKQTLQRYKELQDIIAIL 392 Query: 394 G 394 G Sbjct: 393 G 393 >gi|254491137|ref|ZP_05104318.1| ATP synthase F1, beta subunit [Methylophaga thiooxidans DMS010] gi|224463650|gb|EEF79918.1| ATP synthase F1, beta subunit [Methylophaga thiooxydans DMS010] Length = 458 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/302 (33%), Positives = 158/302 (52%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+++ LGKPID KGD+ E I K P + +TGI+VID+ P Sbjct: 83 LGRIMDVLGKPIDE-----KGDIGEEERWGIHRKAPKFDELAASNELLETGIKVIDLVCP 137 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 + K +V +E P R LT +T+AE+F +G +VL +D+I R+ + E++ Sbjct: 198 IDKVSLVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLFFVDNIYRYTLAGTEVSALL 257 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 258 GRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLI 392 +VL+RS+AE G YP +DPL S SR D D + + + + R++E +DI I Sbjct: 316 ATVVLSRSIAELGIYPAIDPLDSTSRQLDPLVVGNDHYNIARGVQNTLQRYKELKDIIAI 375 Query: 393 GG 394 G Sbjct: 376 LG 377 >gi|313890576|ref|ZP_07824204.1| ATP synthase F1, beta subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313121093|gb|EFR44204.1| ATP synthase F1, beta subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 468 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG ID + + D E + K PA + +TGI+VID+ P Sbjct: 89 LGRVFNVLGDTIDLEKPFAE-DAEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 326 TNLERKLTQMGIYPAVDPLASSSRALAPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|270292835|ref|ZP_06199046.1| ATP synthase F1, beta subunit [Streptococcus sp. M143] gi|270278814|gb|EFA24660.1| ATP synthase F1, beta subunit [Streptococcus sp. M143] Length = 468 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFAEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|229014475|ref|ZP_04171593.1| ATP synthase subunit beta [Bacillus mycoides DSM 2048] gi|229170013|ref|ZP_04297705.1| ATP synthase subunit beta [Bacillus cereus AH621] gi|228613438|gb|EEK70571.1| ATP synthase subunit beta [Bacillus cereus AH621] gi|228746825|gb|EEL96710.1| ATP synthase subunit beta [Bacillus mycoides DSM 2048] Length = 469 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 177/333 (53%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D + D+ + + + PA +VE +TGI+V+D+ P Sbjct: 88 VTLGRVFNVLGDAIDLDGDV-PADVRRDPIHRQAPAFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R+ LT +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARQRVALTGLTMAEHFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG+IT++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNKGSITSIQAVYVPADDYTDPAPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L + G YP VDPLAS SR L+ + + + + + R++E +DI Sbjct: 323 LDATTNLERRLTQMGIYPAVDPLASTSRALSPEIVGEEHYGVARQVQQTLQRYKELQDII 382 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ VH+ I FL Q+ Sbjct: 383 AI----LGMDELSEEDKLVVHRARRIQFFLSQN 411 >gi|150011015|gb|ABR57164.1| F0F1-type ATP synthase beta subunit [Staphylococcus xylosus] Length = 470 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 166/306 (54%), Gaps = 18/306 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNR--QRVEKGFKTGIRVIDIF 155 GRV N LG ID D+ L D S+E + + PA ++ +VE +TGI+VID+ Sbjct: 87 ATLGRVFNVLGDTIDLDEKL---DSSVERDPIHRESPAFDQLSTKVEI-LETGIKVIDLL 142 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D Sbjct: 143 APYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSD 201 Query: 213 N--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 + +KK+ +V +E P R L+ +T+AE+F +G +VLL +D+I RF + E+ Sbjct: 202 SGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEHFRDVQGQDVLLFIDNIFRFTQAGSEV 261 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP +V Sbjct: 262 SALLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPAAVF 319 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388 + LD L R L E G YP VDPLAS SR D D ++ + + ++ E +D Sbjct: 320 AHLDATTNLERKLTEMGIYPAVDPLASTSRALDPTIVGQDHYEIARDVQSTLQKYRELQD 379 Query: 389 IRLIGG 394 I I G Sbjct: 380 IIAILG 385 >gi|306825329|ref|ZP_07458670.1| ATP synthase F1 sector beta subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|306829408|ref|ZP_07462598.1| ATP synthase F1 sector beta subunit [Streptococcus mitis ATCC 6249] gi|304428494|gb|EFM31584.1| ATP synthase F1 sector beta subunit [Streptococcus mitis ATCC 6249] gi|304432461|gb|EFM35436.1| ATP synthase F1 sector beta subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 468 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFAEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|56965609|ref|YP_177343.1| F0F1 ATP synthase subunit beta [Bacillus clausii KSM-K16] gi|81821961|sp|Q5WB78|ATPB_BACSK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|56911855|dbj|BAD66382.1| F0F1-type ATP synthase beta chain [Bacillus clausii KSM-K16] Length = 470 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 95/301 (31%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID + + +G I + P + +TGI+V+D+ P Sbjct: 90 ATLGRVFNVLGEEIDLQEPVAEGTRRDPIHREAPSFEELTTTTEILETGIKVVDLLAPYT 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELINNVALEHGGISVFAGVGERTREGNDLYHEMKDAGVIT 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGADVLLFIDNIFRFTQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L E+G YP VDPLAS SR L+ + + + + + ++ E +DI I Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPEIVGEEHYNVARGVQQTLQKYRELQDIIAIL 387 Query: 394 G 394 G Sbjct: 388 G 388 >gi|164688908|ref|ZP_02212936.1| hypothetical protein CLOBAR_02556 [Clostridium bartlettii DSM 16795] gi|164602112|gb|EDQ95577.1| hypothetical protein CLOBAR_02556 [Clostridium bartlettii DSM 16795] Length = 463 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+DG ++ D + + + P N + +TGI+V+D+ P Sbjct: 87 LGRIFNVLGEPVDGFEA--PKDAPRDPIHRPAPEFNEIAGSAEILETGIKVVDLLAPYLK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + E L K Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNVAKQHGGISVFSGVGERTREGNDLYFEMKESGVLNK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ G Sbjct: 205 TALVFGQMNEPPGARMRVALSGLTMAEYFRDKENQDVLLFIDNIFRFTQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 265 MPSAVGYQPTLATEMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFTHLDAK 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+RS+A G YP VDPL S SR+ D +E V+ + ++ R++E +DI I G Sbjct: 323 TVLSRSIASLGIYPAVDPLESTSRVLDPNIVGEEHYAVARGVQSILQRYKELQDIIAILG 382 >gi|73662090|ref|YP_300871.1| F0F1 ATP synthase subunit beta [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|118573759|sp|Q49Z50|ATPB_STAS1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|72494605|dbj|BAE17926.1| F0F1-type ATP synthase beta subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 470 Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 102/304 (33%), Positives = 164/304 (53%), Gaps = 14/304 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG ID D+ L + + + + PA ++ +VE +TGI+VID+ P Sbjct: 87 ATLGRVFNVLGDTIDLDEKLDTS-VKRDPIHREAPAFDQLSTKVEI-LETGIKVIDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 145 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSG 203 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R L+ +T+AE+F +G +VLL +D+I RF + E++ Sbjct: 204 VIKKTAMVFGQMNEPPGARMRVALSGLTMAEHFRDVQGQDVLLFIDNIFRFTQAGSEVSA 263 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP +V + Sbjct: 264 LLGRMPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPAAVFAH 321 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L E G YP VDPLAS SR D D ++ + + ++ E +DI Sbjct: 322 LDATTNLERKLTEMGIYPAVDPLASTSRALDPTIVGQDHYEIARDVQSTLQKYRELQDII 381 Query: 391 LIGG 394 I G Sbjct: 382 AILG 385 >gi|189345587|ref|YP_001942116.1| F0F1 ATP synthase subunit beta [Chlorobium limicola DSM 245] gi|226740177|sp|B3EDQ7|ATPB_CHLL2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189339734|gb|ACD89137.1| ATP synthase F1, beta subunit [Chlorobium limicola DSM 245] Length = 462 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 94/301 (31%), Positives = 164/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PIDG ++ + I P + + F+TGI+VID+ P G Sbjct: 86 LGRMLNVVGEPIDGKGAVNTKK-TYSIHRSAPKFEDLSTKAEMFETGIKVIDLLEPYSRG 144 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 + G+F G+G+GK+ L+ ++ + F + + VGER RE + + + ++ Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGFS--VFAGVGERTREGNDLYHEMMESGVIE 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R+ LT ++IAEYF + + +VLL +D+I RF + E++ G Sbjct: 203 KTALVFGQMNEPPGARQRVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L +RI + + G++T+V ++ V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLATEMGELQDRI--TSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 VL+RS+AE G YP VDPL S SR+ D D+ ++ ++ R+++ +DI I Sbjct: 321 TTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAIL 380 Query: 394 G 394 G Sbjct: 381 G 381 >gi|324997444|ref|ZP_08118556.1| F0F1 ATP synthase subunit beta [Pseudonocardia sp. P1] Length = 459 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D GDL I K P + + +TGI+V+D+ TP G Sbjct: 82 GHVFNALGDCLDDPSIQFTGDLR-SIHQKAPRFDQLEGKTEMLETGIKVLDLMTPYVVGG 140 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ + + + + VGER RE + I + +K + Sbjct: 141 KIGLFGGAGVGKTVLIQEMIQRVALNFGGTSVFAGVGERTREGNDLITEMTESGVMKNTA 200 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF D +VLL +D+I RF + +E++T G +P Sbjct: 201 LVFGQMDEPPGTRMRVALSALTMAEYFRDAQDQDVLLFIDNIFRFTQAGQEVSTLLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 261 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++++G YP VDPL S SR+ D + DE ++ + + ++ ++ + +DI I G Sbjct: 319 LSRPISQKGIYPAVDPLTSTSRILDPQYVGDEHFRVANEVKRILQKYNDLQDIIAILG 376 >gi|297618429|ref|YP_003703588.1| ATP synthase F1 subunit beta [Syntrophothermus lipocalidus DSM 12680] gi|297146266|gb|ADI03023.1| ATP synthase F1, beta subunit [Syntrophothermus lipocalidus DSM 12680] Length = 476 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 163/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR++N +G P+D LG D + EI K P +++ + +TG++V+D+ P Sbjct: 99 GRILNVVGNPVD---ELGPVDATEYWEIHRKPPALVDQVPSREMLETGVKVLDLICPYAK 155 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ ++ R+ ++ + + VGER RE + + ++K Sbjct: 156 GGKVGMFGGAGVGKTVIIMELIRNIAYEHGGYSVFTGVGERSREGNDLWNEMKESGVIEK 215 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 ++ +E P R LT +T+AEYF +G +VL+ +D+I RFA + E++ G Sbjct: 216 CALIYGQMNEPPGARLRVGLTGLTVAEYFRDVEGQDVLIFIDNIFRFAQAGNEVSALLGR 275 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +++ L ERI + +KG+IT+ +V V D+ DP + + LD Sbjct: 276 MPSAVGYQPTLATDMGLLQERI--TSTKKGSITSAQAVYVPADDLTDPAPATTFAHLDAT 333 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D E + + ++ R++E +DI I G Sbjct: 334 TVLSRQIAELGIYPAVDPLDSTSRILDPLVLGKEHYECARGVQKVLQRYKELQDIIAILG 393 >gi|259416515|ref|ZP_05740435.1| ATP synthase F1, beta subunit [Silicibacter sp. TrichCH4B] gi|259347954|gb|EEW59731.1| ATP synthase F1, beta subunit [Silicibacter sp. TrichCH4B] Length = 474 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 105/312 (33%), Positives = 166/312 (53%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR++N +G+P+D G+ + K + + P N Q E +TGI+VID+ P Sbjct: 84 ATLGRILNVVGEPVDEGEPIVAK---ETRAIHQPAPEFNEQSTESEVLETGIKVIDLLAP 140 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED 208 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 141 YAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIES 198 Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFA 263 + DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF Sbjct: 199 NVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFT 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VLNR+++E G YP VDPL S SRL D +E K+ S + ++ R Sbjct: 317 APATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEEHYKVASDVQQILQR 376 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 377 YKSLQDIIAILG 388 >gi|263359637|gb|ACY70473.1| hypothetical protein DVIR88_6g0010 [Drosophila virilis] Length = 526 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 165/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR++N +G+PID + S I ++ P ++ ++ TGI+V+ Sbjct: 130 IRIPVGAETLGRIMNVIGEPIDERGPIPSAKTS-PIHAEAPEFVDMSVEQEILVTGIKVV 188 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P C G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 189 DLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 247 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 248 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIF 307 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 308 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 365 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 366 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 425 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 426 LQDYKSLQDIIAILG 440 >gi|167768338|ref|ZP_02440391.1| hypothetical protein CLOSS21_02894 [Clostridium sp. SS2/1] gi|317497734|ref|ZP_07956048.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA] gi|167709862|gb|EDS20441.1| hypothetical protein CLOSS21_02894 [Clostridium sp. SS2/1] gi|291560311|emb|CBL39111.1| ATP synthase F1 subcomplex beta subunit [butyrate-producing bacterium SSC/2] gi|316894984|gb|EFV17152.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA] Length = 467 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 160/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG PID + +G + I K P + + +TGI+V+D+ P Sbjct: 87 ATLGRIFNVLGDPID-NKPAPEGANRLPIHRKAPEFSEQSTETEVLETGIKVVDLLCPYQ 145 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ R+ + + + VGER RE + + E + Sbjct: 146 KGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYTEMSESGVID 205 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +TIAE F +G +VLL +D+I RF + E++ G Sbjct: 206 KTAMVFGQMNEPPGARMRVGLTGLTIAEDFRDRGGKDVLLFIDNIFRFTQAGSEVSALLG 265 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 266 RVPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDA 323 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+R+++E G YP VDPL S SR+ D K + K+ + ++ +++E +DI I Sbjct: 324 TTVLSRAISEMGIYPAVDPLESTSRILDPKVVGEEHYKVARGVQEILQKYKELQDIIAIL 383 Query: 394 G 394 G Sbjct: 384 G 384 >gi|160942705|ref|ZP_02089947.1| hypothetical protein FAEPRAM212_00181 [Faecalibacterium prausnitzii M21/2] gi|158445979|gb|EDP22982.1| hypothetical protein FAEPRAM212_00181 [Faecalibacterium prausnitzii M21/2] gi|295104091|emb|CBL01635.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium prausnitzii SL3/3] Length = 464 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 159/305 (52%), Gaps = 10/305 (3%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GRV N LG+P+D + D I P +Q + +TGI+V+D+ Sbjct: 82 PVGDQCLGRVFNLLGEPVD-NKPAPTPDAYWPIHRPAPSYEEQQSTTEILETGIKVVDLI 140 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + + + + VGER RE + + Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGERTREGNDLYGEMTES 200 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + K+ +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ Sbjct: 201 GVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFT 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R +A +G YP VDPL S SR L+ + + ++ ++ ++ R++E +DI Sbjct: 319 HLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIARAVQKVLQRYKELQDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAIMG 383 >gi|110635547|ref|YP_675755.1| F0F1 ATP synthase subunit beta [Mesorhizobium sp. BNC1] gi|118573695|sp|Q11DD5|ATPB_MESSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|110286531|gb|ABG64590.1| ATP synthase F1 subcomplex beta subunit [Chelativorans sp. BNC1] Length = 519 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 159/306 (51%), Gaps = 15/306 (4%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+IN +G+P+D + + I P + + + TGI+V+D+ P Sbjct: 131 MLGRIINVIGEPVDEAGPITATEFRG-IHQPAPEYVEQSTEAQILVTGIKVLDLLAPYAR 189 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL--- 210 G +IG+F G+G+GK+ L+ + + + VGER RE EFIE + Sbjct: 190 GGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKK 249 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +T+AEYF +G +VL +D+I RF + E+ Sbjct: 250 GGGEGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGSEV 309 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + Sbjct: 310 SALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 367 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R+++E+G YP VDPL S SR+ D +E ++ ++ + R++ +D Sbjct: 368 AHLDATTVLSRAISEKGIYPAVDPLDSTSRMLDPQIVGEEHYQVARAVQQTLQRYKSLQD 427 Query: 389 IRLIGG 394 I I G Sbjct: 428 IIAILG 433 >gi|126667608|ref|ZP_01738577.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17] gi|126627877|gb|EAZ98505.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17] Length = 464 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID +G+ +L I K P ++ +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPIDEQGPIGEEEL-WAIHRKAPGYADQAASADLLETGIKVIDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYYEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAE F +G +VL +D+I R+ + E++ G + Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRM 260 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + S LD + Sbjct: 261 PSAVGYQPTLAQEMGELQERI--TSTKSGSITSIQAVYVPADDLTDPSPATTFSHLDATV 318 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +A +G YP +DPL S SR D ++ V+ + +++ R++E +DI I G Sbjct: 319 VLSRDIASKGIYPAIDPLDSTSRQLDPLVIGEQHYAVARGVQNVLQRYKELKDIIAILG 377 >gi|52841288|ref|YP_095087.1| F0F1 ATP synthase subunit beta [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52628399|gb|AAU27140.1| ATP synthase F1, beta chain [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 474 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 165/313 (52%), Gaps = 10/313 (3%) Query: 84 GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G +V+ G RI S GR++N G+P+DG L + ++++ + P E Sbjct: 85 GLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLETHEYR-DVLANLAPLEMTSTQE 143 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERG 199 +TGI+VID+ P G + G+F G+G+GK+ LL M A + + VGER Sbjct: 144 TILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTVLLMELMHAIIQLHQGTSVFAGVGERI 203 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257 RE E + + K+++V DESP +R L+A+T AEY + G VL ++D Sbjct: 204 REGHELWHEMKSAGVMDKTLMVFGQMDESPGVRFRTGLSALTYAEYLRDTLGHEVLFLVD 263 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + EI+ G +P + GY ++ +E+ L ER+ + KG +T+V +V V Sbjct: 264 NIYRFVQAGSEISGLLGRMPASVGYQPTLMTEIAELEERM--TSTAKGAVTSVQAVYVPA 321 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSL 376 D+ +DP + + LD IVL+R+ A +G YP VDPLAS S+ DK + + ++ Sbjct: 322 DDMSDPAVTGIITHLDSIIVLSRAQAGKGIYPAVDPLASKSQFMDKILLGERHYSIAQAV 381 Query: 377 THLIHRFEETRDI 389 + R++E D+ Sbjct: 382 REHLERYQELEDM 394 >gi|89095631|ref|ZP_01168525.1| F0F1 ATP synthase subunit beta [Bacillus sp. NRRL B-14911] gi|89089377|gb|EAR68484.1| F0F1 ATP synthase subunit beta [Bacillus sp. NRRL B-14911] Length = 473 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 104/328 (31%), Positives = 168/328 (51%), Gaps = 15/328 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID D +L G I + P + +TGI+V+D+ P G Sbjct: 92 LGRVFNVLGETIDLDPALQAGIRRDSIHREAPKFEQLSTEVEILETGIKVVDLLAPYIKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + + +KK+ Sbjct: 152 GKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIKKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G + Sbjct: 212 AMVFGQMNEPPGARMRVALTGLTMAEFFRDDQGQDVLFFMDNIFRFTQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ RL ERI + G++T++ ++ V D++ DP + + LD Sbjct: 272 PSAVGYQPTLATEMGRLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 L R L+E G YP VDPLAS SR L+ + + + + + R+ E +DI I Sbjct: 330 NLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQSTLQRYRELQDIIAI--- 386 Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ VH+ I +L Q+ Sbjct: 387 -LGMDELSDEDKLVVHRARRIQFYLSQN 413 >gi|57505327|ref|ZP_00371256.1| ATP synthase F1, beta subunit [Campylobacter upsaliensis RM3195] gi|57016463|gb|EAL53248.1| ATP synthase F1, beta subunit [Campylobacter upsaliensis RM3195] Length = 484 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR+ N G ID + + D I + P A Q + F+TGI+V+D+ P G Sbjct: 88 GRIFNVTGDLIDEGEEI-SFDKRWSI-HRDPSAFEDQSTKSEIFETGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ ++ + F + + VGER RE + + N L K Sbjct: 146 GKVGLFGGAGVGKTVIIMELIHNVAFKHSGYSVFAGVGERTREGNDLYNEMKESNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 + +E P R LT +T+AEYF + G +VL+ +D+I RF+ S E++ G + Sbjct: 206 ALCYGQMNEPPGARNRIALTGLTMAEYFRDEMGLDVLMFIDNIFRFSQSGSEMSALLGRI 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ + ERI + +KG+IT+V +V V D+ DP +V + LD Sbjct: 266 PSAVGYQPTLASEMGKFQERI--TSTKKGSITSVQAVYVPADDLTDPAPATVFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VLNR++AE+G YP VDPL S SR+ D +E K+ + ++ ++++ +DI I G Sbjct: 324 VLNRAIAEKGIYPAVDPLDSTSRMLDPQIIGEEHYKVARGVQSVLQKYKDLQDIIAILG 382 >gi|294155618|ref|YP_003560002.1| ATP synthase F1, beta subunit [Mycoplasma crocodyli MP145] gi|291600077|gb|ADE19573.1| ATP synthase F1, beta subunit [Mycoplasma crocodyli MP145] Length = 466 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 160/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160 GR+ + LG PID S L+ + +PP Q+ + +TGI+VID+ P Sbjct: 87 LGRMFDVLGNPIDLLPSQKWNKLNP--IHALPPTYEEQKSTSEILETGIKVIDLLIPYSK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + L K Sbjct: 145 GGKIGLFGGAGVGKTVLVQELINNIATEHNGLSVFAGVGERTREGNDLYHEMKAAGVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 205 TALVFGQMNEPPGARMRVALTGLTMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +G+IT+V +V V D+ DP + + LD Sbjct: 265 MPSAVGYQPTLATEMGQLQERI--TSTRRGSITSVQAVYVPADDLTDPAPATTFTHLDAK 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G YP +DPL S SRL D +E + + +++ RF+E +DI I G Sbjct: 323 TVLDRNIAALGIYPAIDPLTSSSRLLDPLVVGNEHYNVAQGVLNILQRFKELQDIIAILG 382 >gi|167899454|ref|ZP_02486855.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 7894] Length = 450 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 16/309 (5%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148 G R+ GR+++ G P GDD D+ + + P + Q+ F TG Sbjct: 8 GPIRVPVGDAVLGRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATG 65 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR 203 I+VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE Sbjct: 66 IKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGH 123 Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 E + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ R Sbjct: 124 EMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFR 183 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ Sbjct: 184 FVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFT 241 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 242 DPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVI 301 Query: 381 HRFEETRDI 389 + E +D+ Sbjct: 302 EHYRELQDV 310 >gi|118573778|sp|Q5GRU7|ATPB_WOLTR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 480 Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 165/308 (53%), Gaps = 21/308 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG +E + +VPP+ Q++ E+ TGI+VID+ P G Sbjct: 87 GRIFNVVGEVIDECGPL-KGKYDLESIHRVPPSFTEQKIQEEVLVTGIKVIDLLAPYLKG 145 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 203 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 204 VNEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGS 263 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 264 EISALLGRMPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPAA 321 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 S LD VL+R +AE G YP VDPL S S+ L+ + + K+ S + ++ ++ Sbjct: 322 TFSHLDSTTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIVGEEHYKVTSEVKRILQTYKSL 381 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 382 QDIIAILG 389 >gi|15082073|gb|AAK84019.1|AF393838_8 H+-ATPase cytoplasmic F1-part beta-subunit [Lactococcus lactis subsp. lactis] Length = 469 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG IDG + I K P + TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDVIDGGEEFAADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYL 147 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++ Sbjct: 148 KGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIE 207 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 208 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLG 267 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 268 RMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDA 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L + G YP VDPLAS SR L + + ++ + ++ R++E +DI I Sbjct: 326 TTNLERRLTQMGIYPAVDPLASSSRALTPEIXGEEHYEVAMEVQRVLQRYKELQDIIAIL 385 Query: 394 G 394 G Sbjct: 386 G 386 >gi|323699973|ref|ZP_08111885.1| ATP synthase F1, beta subunit [Desulfovibrio sp. ND132] gi|323459905|gb|EGB15770.1| ATP synthase F1, beta subunit [Desulfovibrio desulfuricans ND132] Length = 465 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 163/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR++N +GKP+D LG+ + + + PA Q + + +TGI+V+D+ P Sbjct: 91 GRIMNVVGKPVD---ELGEVPCEKRLPIHRAAPAFTEQSTKVELLETGIKVVDLLIPFPK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKK 216 G ++G+F G+G+GK+ +L + IS+ VGER RE + + L+K Sbjct: 148 GGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLEK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LTA+T AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 AALVYGQMNEPPGARARVALTALTCAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + + LDG Sbjct: 268 MPSAVGYQPTLGTDLGGLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDGT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +AE G YP VDPL S SR L+ A+ + ++ ++++ +DI I G Sbjct: 326 LVLSRQIAELGIYPAVDPLDSTSRILSPDVLGAEHYNTAREVQSVLQKYKDLQDIIAILG 385 >gi|85713719|ref|ZP_01044709.1| ATP synthase subunit B [Nitrobacter sp. Nb-311A] gi|85699623|gb|EAQ37490.1| ATP synthase subunit B [Nitrobacter sp. Nb-311A] Length = 476 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 161/313 (51%), Gaps = 15/313 (4%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ A GR++N +G+P+D + DL I ++ P ++ + TGI+V+D Sbjct: 81 RVPVGAGTLGRIMNVIGEPVDEGGPIKADDLR-PIHAEAPSYTDQSTEAEILVTGIKVVD 139 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206 + P G +IG+F G+G+GK+ L+ + + + VGER RE EFI Sbjct: 140 LLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFI 199 Query: 207 EDYL----GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 E + G K +V +E P R L+ +T+AE F +G +VL +D+I RF Sbjct: 200 ESGVNKKGGGEGSKCALVYGQMNEPPGARARVALSGLTVAEQFRDQGQDVLFFVDNIFRF 259 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ D Sbjct: 260 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSITSVQAIYVPADDLTD 317 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIH 381 P + + LD VLNR+++E+G YP VDPL S SR+ +E + + ++ Sbjct: 318 PAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARMVQQVLQ 377 Query: 382 RFEETRDIRLIGG 394 R++ +DI I G Sbjct: 378 RYKSLQDIIAILG 390 >gi|320354740|ref|YP_004196079.1| ATP synthase F1 subcomplex subunit beta [Desulfobulbus propionicus DSM 2032] gi|320123242|gb|ADW18788.1| ATP synthase F1 subcomplex beta subunit [Desulfobulbus propionicus DSM 2032] Length = 473 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 9/302 (2%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR++N +G+P+DG + + SM I P + + +TGI+VID+ P Sbjct: 90 APALGRIMNVVGRPVDGMGPISS-EKSMPIHRPAPLFIEQDTEVNVLETGIKVIDLLVPF 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G ++G+F G+G GK+ ++ + IS+ VGER RE + + L Sbjct: 149 PRGGKMGLFGGAGCGKTVIMMEMVNNIAMQHGGISVFCGVGERTREGNDLYNEMKESGVL 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V E P R LT +T AEYF +G +VL +D+I RF + E++ Sbjct: 209 PKAALVYGQMTEPPGARSRVALTGLTAAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ ++L L ERI + KG+ITAV V V D+ DP + + LD Sbjct: 269 GRIPSAVGYQPTLATDLGALQERI--TSTTKGSITAVQCVYVPADDLTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 G +VL+R +AE G YP VDPL S SR+ D E + + + +++E +DI I Sbjct: 327 GTVVLSRQIAELGIYPAVDPLDSTSRILDPNVVGQEHYQTARGVQVALQKYKELQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|302334943|ref|YP_003800150.1| ATP synthase F1 subcomplex beta subunit [Olsenella uli DSM 7084] gi|301318783|gb|ADK67270.1| ATP synthase F1 subcomplex beta subunit [Olsenella uli DSM 7084] Length = 493 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 163/312 (52%), Gaps = 12/312 (3%) Query: 89 HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKT 147 H + PS GRV N +G+P+DG ++ D+ + PA + F+T Sbjct: 100 HPMMMPVGPSTL--GRVWNVMGQPVDGGET--PTDVQFYPIHHPAPAFEELTTQTEIFET 155 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVRE 204 GI+ ID+ P G + G+F G+G+GK+ L+ + + + + VGER RE + Sbjct: 156 GIKAIDLLEPYVRGGKTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTD 215 Query: 205 -FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 F+E + K+ +V +E P R L +T AEYF +G +VLL +D+I RF+ Sbjct: 216 LFLEMTESGVINKTCLVYGQMNEPPGARLRVGLAGLTTAEYFRDQGQDVLLFIDNIFRFS 275 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP Sbjct: 276 QAGSEVSALLGRMPSAVGYQPTLATEMGDLQERI--TSTKEGSITSVQAVYVPADDLTDP 333 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+RS+ E G YP VDPLAS S D + +E ++ ++ + + Sbjct: 334 APATTFTHLDATTVLSRSITELGIYPAVDPLASSSSALDPSVVGEEHYRVAMAVQETLQQ 393 Query: 383 FEETRDIRLIGG 394 + + +DI I G Sbjct: 394 YSDLQDIIAILG 405 >gi|289435790|ref|YP_003465662.1| ATP synthase F1, beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289172034|emb|CBH28580.1| ATP synthase F1, beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 473 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG ID D+ L +I + P + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E ++ Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393 L R L E+G YP VDPLAS SR +E V++ + L+ R++E +DI I Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 387 Query: 394 G 394 G Sbjct: 388 G 388 >gi|266620417|ref|ZP_06113352.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479] gi|288867994|gb|EFD00293.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479] Length = 468 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 166/309 (53%), Gaps = 13/309 (4%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVI 152 R+ GR+ N LG+ ID + L +G+ ++ + PP+ Q V + +TGI+VI Sbjct: 78 RVPVGEQTLGRLFNVLGETIDNGEPLKEGE--KWVIHRDPPSFEEQSPVAEILETGIKVI 135 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ + + I + VGER RE + + Sbjct: 136 DLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWTE- 194 Query: 210 LGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 +G++ ++K+ +V +E P R T +T+AEYF + NVLL +D+I RF + Sbjct: 195 MGESGVIEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDQEHKNVLLFIDNIFRFVQAG 254 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + + G++T+V +V V D+ DP Sbjct: 255 SEVSALLGRMPSAVGYQPTLATEMGELQERI--TSTKNGSVTSVQAVYVPADDLTDPAPA 312 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEE 385 + + LD VL+R + E+G YP VDPL S SR+ + +E V+ + + ++ E Sbjct: 313 TTFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEPDVVGEEHYEVARMVQETLQKYRE 372 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 373 LQDIIAILG 381 >gi|116873893|ref|YP_850674.1| F0F1 ATP synthase subunit beta [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466611|sp|A0ALL3|ATPB2_LISW6 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|116742771|emb|CAK21895.1| ATP synthase F1, beta subunit [Listeria welshimeri serovar 6b str. SLCC5334] Length = 473 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG ID D+ L +I + P + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E ++ Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393 L R L E+G YP VDPLAS SR +E V++ + L+ R++E +DI I Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 387 Query: 394 G 394 G Sbjct: 388 G 388 >gi|304373021|ref|YP_003856230.1| Proton-translocating ATPase, beta subunit [Mycoplasma hyorhinis HUB-1] gi|304309212|gb|ADM21692.1| Proton-translocating ATPase, beta subunit [Mycoplasma hyorhinis HUB-1] Length = 470 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 104/297 (35%), Positives = 160/297 (53%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LGK ID + L EI S P ++++ + TGI+VID+ P G + Sbjct: 96 RMFNVLGKVIDEKPAPVFEQLK-EIHSPAPSYVDQKASSEILVTGIKVIDLLIPFVKGGK 154 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ + + +S+ VGER RE + + E L K+ + Sbjct: 155 IGLFGGAGVGKTVLVQELINNVATEHGGLSVFAGVGERSREGNDLYFEMEAAGVLDKTAL 214 Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 215 VFGQMNEPPGARMRVALSALTMAEYFRDQENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 274 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 GY ++ +E+ +L ERI + + G+IT+V +V V D+ DP + S LD VL Sbjct: 275 TVGYQPTLATEMGQLQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFSHLDAKTVL 332 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R++A G YP VDPLAS SR+ D E V+ + + RF+E +DI I G Sbjct: 333 DRNIASLGIYPAVDPLASGSRILDPLIVGQEHYNVARQVIQTLQRFKELQDIIAILG 389 >gi|86609936|ref|YP_478698.1| F0F1 ATP synthase subunit beta [Synechococcus sp. JA-2-3B'a(2-13)] gi|118573768|sp|Q2JIV9|ATPB_SYNJB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|86558478|gb|ABD03435.1| ATP synthase F1, beta subunit [Synechococcus sp. JA-2-3B'a(2-13)] Length = 477 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + + + I PP ++ + F+TGI+VID+ P G Sbjct: 98 LGRIFNVLGEPVDQGEPVQAQEFA-PIHRSAPPLVDLTIKPEPFETGIKVIDLLAPFKKG 156 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + + +S+ VGER RE + + L K Sbjct: 157 GKVGLFGGAGVGKTVLIQELIHNIAEEHSGLSVFAGVGERTREGNDLYNEMKESGVLDKV 216 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LTA+T+AEYF +VLL +D+I RF + E++ G + Sbjct: 217 ALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRM 276 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD + Sbjct: 277 PSAVGYQPTLATEMGNLQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFAHLDSTV 334 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RSLA +G YP VDPL S S + +E ++ + R++E +DI I G Sbjct: 335 VLSRSLAAKGIYPAVDPLDSSSTILQADIVGEEHYNTARAVKQTLQRYKELQDIIAILG 393 >gi|58584946|ref|YP_198519.1| F0F1 ATP synthase subunit beta [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419262|gb|AAW71277.1| F0F1-type ATP synthase, beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 488 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 165/308 (53%), Gaps = 21/308 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG +E + +VPP+ Q++ E+ TGI+VID+ P G Sbjct: 95 GRIFNVVGEVIDECGPL-KGKYDLESIHRVPPSFTEQKIQEEVLVTGIKVIDLLAPYLKG 153 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 154 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 211 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 212 VNEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGS 271 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 272 EISALLGRMPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPAA 329 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 S LD VL+R +AE G YP VDPL S S+ L+ + + K+ S + ++ ++ Sbjct: 330 TFSHLDSTTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIVGEEHYKVTSEVKRILQTYKSL 389 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 390 QDIIAILG 397 >gi|317494643|ref|ZP_07953055.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA] gi|316917245|gb|EFV38592.1| ATP synthase F1 [Enterobacteriaceae bacterium 9_2_54FAA] Length = 459 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ D I + P ++ +TGI+V+D+ P Sbjct: 82 ATLGRIMNVLGEPIDMKGDIGEED-RWAIHREAPSYEELSNSQELLETGIKVMDLICPFA 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 141 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 201 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 260 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 261 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 318 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 378 >gi|313115085|ref|ZP_07800574.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii KLE1255] gi|310622599|gb|EFQ06065.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii KLE1255] Length = 470 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 161/299 (53%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ + LG+PIDG S+ D+ I K P ++ + +TGI+VID+ P G Sbjct: 86 GRMFDPLGRPIDGKGSVD--DVPHWPIHRKAPSFAEQKPATEILETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + I + VGER RE + + L K+ Sbjct: 144 GKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGCDLWGEMNESGVLNKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF + +VLL +D+I RF + E++ G + Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLFIDNIFRFVQAGSEVSALMGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +EL L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLANELGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPLAS SR+ + +E ++ + ++ R++E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVARKVQSILQRYQELQDIIAILG 380 >gi|16801734|ref|NP_472002.1| F0F1 ATP synthase subunit beta [Listeria innocua Clip11262] gi|81853853|sp|Q927W4|ATPB2_LISIN RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|16415209|emb|CAC97899.1| atpD [Listeria innocua Clip11262] Length = 473 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG ID D+ L +I + P + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E ++ Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L E+G YP VDPLAS SR L+ + ++ + + L+ R++E +DI I Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYEVATEVQRLLQRYKELQDIIAIL 387 Query: 394 G 394 G Sbjct: 388 G 388 >gi|225028203|ref|ZP_03717395.1| hypothetical protein EUBHAL_02475 [Eubacterium hallii DSM 3353] gi|224954515|gb|EEG35724.1| hypothetical protein EUBHAL_02475 [Eubacterium hallii DSM 3353] Length = 464 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 160/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+PID + +G I K P + + +TGI+V+D+ P G Sbjct: 90 GRIFNVLGEPID-KKPVPEGVKRNPIHRKAPTFAEQATETEILETGIKVVDLLCPYQKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ R+ + + + VGER RE + + E + K+ Sbjct: 149 KIGLFGGAGVGKTVLIQELIRNVATEHGGYSVFTGVGERTREGNDLYTEMSESGVIDKTA 208 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAE F +G +VLL +D+I RF + E++ G +P Sbjct: 209 MVFGQMNEPPGARMRVGLTGLTIAENFRDEGGKDVLLFIDNIFRFTQAGSEVSALLGRVP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD V Sbjct: 269 SAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++ E+G YP VDPL S SR+ D +E ++ + ++ R++E +DI I G Sbjct: 327 LSRAIVEQGIYPAVDPLESTSRILDPRIVGEEHYQVARGVQEILQRYKELQDIIAILG 384 >gi|209883747|ref|YP_002287604.1| ATP synthase F1, beta subunit [Oligotropha carboxidovorans OM5] gi|226740656|sp|B6JD09|ATPB_OLICO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|209871943|gb|ACI91739.1| ATP synthase F1, beta subunit [Oligotropha carboxidovorans OM5] Length = 476 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 159/305 (52%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + K D + I + P + + TGI+V+D+ P G Sbjct: 90 GRIMNVVGEPVDEGGPV-KADGTRAIHQEAPAYTEQSTEAEILVTGIKVVDLLAPYAKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIEDYL---- 210 +IG+F G+G+GK+ L+ A++ V VGER RE EFIE + Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAG-VGERTREGNDLYHEFIESGVNKKG 207 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 G K +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ Sbjct: 208 GGEGSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVS 267 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + + Sbjct: 268 ALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSFA 325 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDI 389 LD VLNR+++E+G YP VDPL S SR+ +E + + ++ R++ +DI Sbjct: 326 HLDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLVVGEEHYQTARMVQQVLQRYKSLQDI 385 Query: 390 RLIGG 394 I G Sbjct: 386 IAILG 390 >gi|283795522|ref|ZP_06344675.1| ATP synthase F1, beta subunit [Clostridium sp. M62/1] gi|291077188|gb|EFE14552.1| ATP synthase F1, beta subunit [Clostridium sp. M62/1] gi|295091202|emb|CBK77309.1| ATP synthase F1 subcomplex beta subunit [Clostridium cf. saccharolyticum K10] Length = 462 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ IDG +SL +G+ I P +++ V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGETIDGGESL-EGEEHWVIHRDPPSFADQKPVVEILETGIKVIDLLAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ ++ + I + VGER RE + + E L K+ Sbjct: 145 KIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLSKTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF + +VLL +D+I RF + E++ G +P Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDREHQDVLLFIDNIFRFVQAGSEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI +++ G++T+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLATEMGELQERIASTKE--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R + E+G YP VDPL S SR+ + +E + + ++ +++E +DI I G Sbjct: 323 LSRKIVEQGIYPAVDPLESTSRILEADVVGEEHYETARRVQEVLQKYKELQDIIAILG 380 >gi|116618945|ref|YP_819316.1| F0F1 ATP synthase subunit beta [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227431390|ref|ZP_03913441.1| F0F1 ATP synthase subunit beta [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|122270855|sp|Q03V29|ATPB_LEUMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|28193535|emb|CAD48595.1| F1F0-ATPase subunit beta [Leuconostoc mesenteroides subsp. mesenteroides] gi|116097792|gb|ABJ62943.1| ATP synthase F1 subcomplex beta subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|227352853|gb|EEJ43028.1| F0F1 ATP synthase subunit beta [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 466 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 154/296 (52%), Gaps = 8/296 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+P+D + ++ I P + +TGI+VID+ P Sbjct: 85 ATLGRVFNVLGEPVDNNGAIASDVRRSSIHRDAPKYDELTSSTEILETGIKVIDLLAPYV 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + LK Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMEESGVLK 204 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ +V +E P R LT +T+AE F ++G +VLL +D+I RF + E++ G Sbjct: 205 QTAMVYGQMNEPPGARMRVALTGLTMAENFRDNEGKDVLLFIDNIFRFTQAGSEVSALLG 264 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L R+L ++G YP VDPLAS S D E ++ + + + R+ E +DI Sbjct: 323 TTNLERALTQQGIYPAVDPLASTSSALDPQIVGQEHYEVATEVQRTLQRYRELQDI 378 >gi|322815479|gb|EFZ24127.1| ATPase beta subunit, putative [Trypanosoma cruzi] Length = 518 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 159/301 (52%), Gaps = 20/301 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID +G+ M I + P ++ + TGI+VID+ P C G Sbjct: 116 GRIFNVLGDAIDQRGHVGEKQ-RMPIHAVAPKLADQAAEDTILTTGIKVIDLILPYCKGG 174 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE--------VREFIEDYL 210 +IG+F G+G+GK+ L++ A+ V VGER RE ++ + D Sbjct: 175 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 233 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 GD+ K V+V +E P R +A+T+AEYF +G +VLL +D+I RF + E+ Sbjct: 234 GDS--KCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQDVLLFIDNIFRFTQANSEV 291 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +L +L ERI + KG+IT+V +V V D+ DP + Sbjct: 292 SALLGRIPAAVGYQPTLAEDLGQLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTF 349 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388 S LD VL+R++AE G YP V+PL SR+ D S D + + ++ +++E +D Sbjct: 350 SHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVISVDHYNVAQDVVQMLTKYKELQD 409 Query: 389 I 389 I Sbjct: 410 I 410 >gi|71661631|ref|XP_817834.1| ATPase beta subunit [Trypanosoma cruzi strain CL Brener] gi|70883049|gb|EAN95983.1| ATPase beta subunit, putative [Trypanosoma cruzi] Length = 518 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 159/301 (52%), Gaps = 20/301 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID +G+ M I + P ++ + TGI+VID+ P C G Sbjct: 116 GRIFNVLGDAIDQRGPVGEKQ-RMPIHAVAPKLADQAAEDTILTTGIKVIDLILPYCKGG 174 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE--------VREFIEDYL 210 +IG+F G+G+GK+ L++ A+ V VGER RE ++ + D Sbjct: 175 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 233 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 GD+ K V+V +E P R +A+T+AEYF +G +VLL +D+I RF + E+ Sbjct: 234 GDS--KCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQDVLLFIDNIFRFTQANSEV 291 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +L +L ERI + KG+IT+V +V V D+ DP + Sbjct: 292 SALLGRIPAAVGYQPTLAEDLGQLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTF 349 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388 S LD VL+R++AE G YP V+PL SR+ D S D + + ++ +++E +D Sbjct: 350 SHLDATTVLDRAVAESGIYPAVNPLECASRIMDPDVISVDHYNVAQDVVQMLTKYKELQD 409 Query: 389 I 389 I Sbjct: 410 I 410 >gi|296106670|ref|YP_003618370.1| F-type H -transporting ATPase beta chain [Legionella pneumophila 2300/99 Alcoy] gi|295648571|gb|ADG24418.1| F-type H -transporting ATPase beta chain [Legionella pneumophila 2300/99 Alcoy] Length = 465 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 84 GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G +V+ G RI S GR++N G+P+DG L + ++++ P E Sbjct: 76 GLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLETHEYR-DVLANFAPLEMTSTQE 134 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERG 199 +TGI+VID+ P G + G+F G+G+GK+ LL M A + + VGER Sbjct: 135 TILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTVLLMELMHAIIQLHQGTSVFAGVGERI 194 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257 RE E + + K+++V DESP +R L+A+T AEY + G VL ++D Sbjct: 195 REGHELWHEMKSAGVMDKTLMVFGQMDESPGVRFRTGLSALTYAEYLRDTLGHEVLFLVD 254 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + EI+ G +P + GY ++ +E+ L ER+ + KG +T+V +V V Sbjct: 255 NIYRFVQAGSEISGLLGRMPASVGYQPTLMTEIAELEERM--TSTAKGAVTSVQAVYVPA 312 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSL 376 D+ +DP + + LD IVL+R+ A +G YP VDPLAS S+ DK + + ++ Sbjct: 313 DDMSDPAVTGIITHLDSIIVLSRAQAGKGIYPAVDPLASKSQFMDKILLGERHYSIAQAV 372 Query: 377 THLIHRFEETRDI 389 + R++E D+ Sbjct: 373 REHLERYQELEDM 385 >gi|302341729|ref|YP_003806258.1| ATP synthase F1, subunit beta [Desulfarculus baarsii DSM 2075] gi|301638342|gb|ADK83664.1| ATP synthase F1, beta subunit [Desulfarculus baarsii DSM 2075] Length = 469 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 103/329 (31%), Positives = 171/329 (51%), Gaps = 16/329 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV+N +G+P+DG + + I P +++ +TG++VID+ P Sbjct: 88 AILGRVLNVVGRPVDGLGPVNAKEY-FPIHRPAPSLVDQDTSVNVLETGVKVIDLLVPFP 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ ++ + IS+ VGER RE + + + Sbjct: 147 RGGKMGMFGGAGVGKTVIMMEMIHNIAMQHGGISVFAGVGERTREGNDLYHEMKDSGVIS 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V E P R ++A+T AEY+ +G +VLL +D+I RF + E++ G Sbjct: 207 KAALVYGQMTEPPGARARVAISALTTAEYYRDVQGQDVLLFVDNIFRFTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ ++L L ERI + KG+IT+V V V D+ DP + + LDG Sbjct: 267 RMPSAVGYQPTLGTDLGELQERI--TSTTKGSITSVQCVYVPADDLTDPAPATTFAHLDG 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDIRLIG 393 +VL+R ++E G YP VDPL S SR+ D + +E V+ +I ++++ +DI I Sbjct: 325 TVVLSRQISELGIYPAVDPLDSTSRILDPNYLGEEHYGVARKVQMILQKYKDLQDIIAI- 383 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQ 419 G+D + D+ VH+ I FL Q Sbjct: 384 ---LGMDELSDEDKITVHRARRIQRFLSQ 409 >gi|300250972|gb|ADJ95799.1| ATP synthase [Helicoverpa zea] Length = 516 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 166/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P ++ ++ TGI+V+ Sbjct: 122 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVV 180 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE +E Sbjct: 181 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYQE 239 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 240 MIESGVISLKDKTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 299 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 300 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 357 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 358 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKI 417 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 418 LQDYKSLQDIIAILG 432 >gi|189499031|ref|YP_001958501.1| F0F1 ATP synthase subunit beta [Chlorobium phaeobacteroides BS1] gi|226740178|sp|B3EJK9|ATPB_CHLPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189494472|gb|ACE03020.1| ATP synthase F1, beta subunit [Chlorobium phaeobacteroides BS1] Length = 462 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G PIDG + K + S I P + F+TGI+VID+ P G Sbjct: 86 LGRMLNVVGDPIDGKGPV-KSEKSYSIHRPTPKFDVLSTKSEMFETGIKVIDLLEPYSRG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ + + S+ VGER RE + E+ + K+ Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLWEEMKESGVIDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT ++IAEYF + + +VLL +D+I RF + E++ G + Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRM 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L +RI KG++T+V ++ V D+ DP + + LD Sbjct: 265 PSAVGYQPTLGTEMGELQDRI--VSTNKGSVTSVQAIYVPADDLTDPAPATAFTHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D DE ++ L+ R+++ +DI I G Sbjct: 323 VLSRSIAELGIYPAVDPLDSTSRILDPNIVGDEHYNTAQAVKSLLQRYKDLQDIIAILG 381 >gi|255004306|ref|ZP_05279107.1| F0F1 ATP synthase subunit beta [Anaplasma marginale str. Virginia] Length = 486 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 111/342 (32%), Positives = 179/342 (52%), Gaps = 20/342 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + +S GD G ++P GRV + LG+PIDG S+ D+ Sbjct: 67 MVRCVAMGSTDSLSRGDKFISTGNQMMAPVGRGTLGRVFDVLGRPIDGLGSVSS-DVEFR 125 Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182 + P+++ QRV + TGI+V+D+ P G ++G+F G+G+GK+ L+S A Sbjct: 126 PIHAKAPSLSEQRVAAEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNVA 185 Query: 183 RSDCFDKVIISLVGERGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMA 234 R+ V VGER RE RE +E + D KS V+V +E P R Sbjct: 186 RAHKGFSVFAG-VGERTREGNDLYREMVESGVISRDEPSKSQAVLVYGQMNEPPGARMRV 244 Query: 235 PLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 LTA+T+AEYF S+G +VL +D++ RF S E++ G +P A GY ++ +E+ + Sbjct: 245 ALTALTMAEYFRDSEGQDVLFFVDNVFRFTQSGSEVSALLGRIPSAVGYQPTLAAEMGAM 304 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 ERI + G+IT+V ++ V D+ DP + + LD VL+R ++E G YP VDP Sbjct: 305 QERI--TSTNTGSITSVQAIYVPADDLTDPAPAASFAHLDSTTVLSRQISELGIYPAVDP 362 Query: 354 LASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L S S+ L+ + ++ + + ++ ++ +DI I G Sbjct: 363 LESTSQALSPEVVGSEHYDVAQEVKRILQTYKSLQDIIAILG 404 >gi|260437517|ref|ZP_05791333.1| ATP synthase F1, beta subunit [Butyrivibrio crossotus DSM 2876] gi|292810150|gb|EFF69355.1| ATP synthase F1, beta subunit [Butyrivibrio crossotus DSM 2876] Length = 463 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ ID + + + + I K P + + +TGI+V+D+ P G Sbjct: 90 GRIFNVLGEAID-NKPAPEVEQYLPIHRKAPSFEEQSTSTEILETGIKVVDLLCPYQKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ R+ + + + VGER RE + + + K+ Sbjct: 149 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMQESGVINKTT 208 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 209 MVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDVLLFIDNIFRFTQAGSEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD V Sbjct: 269 SAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ E G YP VDPL S SR+ D +E K+ + ++ +++E +DI I G Sbjct: 327 LDRSIVELGIYPAVDPLGSSSRILDPRIVGEEHYKVARGVQEILQKYKELQDIIAILG 384 >gi|317050178|ref|YP_004117826.1| ATP synthase F1 subunit beta [Pantoea sp. At-9b] gi|316951795|gb|ADU71270.1| ATP synthase F1, beta subunit [Pantoea sp. At-9b] Length = 465 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 160/304 (52%), Gaps = 11/304 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID L + D S+ +S + P ++ ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGEPIDMKGDLKEEDGSVPEVSSIHRAAPSYEDQSNSQELLETGIKVIDLM 142 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 143 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDS 202 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 203 NVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 262 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 320 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD + L+R +A G YP VDPL S SR D E V+ + L+ R++E +DI Sbjct: 321 LDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSLLQRYQELKDII 380 Query: 391 LIGG 394 I G Sbjct: 381 AILG 384 >gi|57234667|ref|YP_181307.1| F0F1 ATP synthase subunit beta [Dehalococcoides ethenogenes 195] gi|118573525|sp|Q3Z8Z2|ATPB_DEHE1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|57225115|gb|AAW40172.1| ATP synthase F1, beta subunit [Dehalococcoides ethenogenes 195] Length = 464 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + K + +M I P + + +TG++VID+ P G Sbjct: 85 LGRIFNVLGEPLDNRGDV-KAEKTMPIHRSAPAMDELESSAQVLETGLKVIDLIAPFARG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG G+G+GK+ L+ R+ + S+ VGER RE + + L K+ Sbjct: 144 GKIGALGGAGVGKTVLIQELIRNIATEHEGFSVFAGVGERSREGNDLWHEMEDSGVLPKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P +R LT +T+AEYF + +VLL +D+I R+ + E++ G + Sbjct: 204 TMVFGQMNELPAVRLRIALTGLTMAEYFRDEERQDVLLFIDNIYRYTLAGMEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI +++ G+IT+ +V V D++ DP + LD I Sbjct: 264 PSAVGYQPTLATEMGALQERIASTKQ--GSITSFQAVYVPADDYTDPGVVATFGHLDAMI 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L RSLAE+ YP VDPLAS SR+ D +E ++ + ++ R+++ +D+ I G Sbjct: 322 ALERSLAEQALYPAVDPLASNSRILDPQVVGEEHYQVARDVQKVLQRYKDLQDVIAILG 380 >gi|326792679|ref|YP_004310500.1| ATP synthase F1 subunit beta [Clostridium lentocellum DSM 5427] gi|326543443|gb|ADZ85302.1| ATP synthase F1, beta subunit [Clostridium lentocellum DSM 5427] Length = 463 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 159/301 (52%), Gaps = 16/301 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N G +DG K D +E I + P + + +TGI+V+D+ P Sbjct: 89 GRIFNVTGHAVDG-----KPDPQVEKWPIHREAPSFEEQSTSAEILETGIKVVDLICPYL 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ R+ + + + VGER RE + + + Sbjct: 144 KGGKIGLFGGAGVGKTVLIQELIRNIATEHGGFSVFAGVGERTREGNDLYHEMTDSGVIA 203 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ G Sbjct: 204 KTTMVFGQMNEPPGARMRVALTGLTMAEYFRDQSGQDVLLFVDNIFRFTQAGSEVSALLG 263 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 264 RTPSAVGYQPTLATEMGTLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDA 321 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+R++ E+G YP VDPL S SR+ D +E V+ + ++ R++E +DI I Sbjct: 322 KTVLSRAIVEQGIYPAVDPLESSSRVLDPQIVGEEHYSVARGVQSILQRYKELQDIIAIL 381 Query: 394 G 394 G Sbjct: 382 G 382 >gi|15673746|ref|NP_267920.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. lactis Il1403] gi|281492356|ref|YP_003354336.1| ATP synthase F1 subunit beta [Lactococcus lactis subsp. lactis KF147] gi|22653662|sp|Q9CES0|ATPB_LACLA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|12724786|gb|AAK05862.1|AE006406_6 ATP synthase alpha subunit [Lactococcus lactis subsp. lactis Il1403] gi|281376020|gb|ADA65511.1| ATP synthase F1, beta subunit [Lactococcus lactis subsp. lactis KF147] gi|326407250|gb|ADZ64321.1| F-type H+-transporting ATPase subunit beta [Lactococcus lactis subsp. lactis CV56] Length = 469 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG IDG + I K P + TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGDVIDGGEEFAADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYL 147 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++ Sbjct: 148 KGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIE 207 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 208 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLG 267 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 268 RMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDA 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L + G YP VDPLAS SR L + + ++ + ++ R++E +DI I Sbjct: 326 TTNLERRLTQMGIYPAVDPLASSSRALTPEIVGEEHYEVAMEVQRVLQRYKELQDIIAIL 385 Query: 394 G 394 G Sbjct: 386 G 386 >gi|1168582|sp|P42469|ATPB_STIAU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|587526|emb|CAA54206.1| ATPase beta-subunit [Stigmatella aurantiaca] Length = 481 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 163/305 (53%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + + I P +++ + F+TGI+VID+ P G Sbjct: 96 GRILNVIGEPVDERGPITSSQ-TWPIHRPAPTFVDQDVRVQAFETGIKVIDLLGPYTRGG 154 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNLK---- 215 +IG+F G+G+GK+ LL + ++ + + VGER RE + + N+ Sbjct: 155 KIGLFGGAGVGKTVLLMELIVNVAKERGGFSVFAGVGERTREGNDLYHEMQEGNVSTPRT 214 Query: 216 ----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + V+V +E P R L+A+TIAEYF +G +VLL +D+I RF + E++ Sbjct: 215 WMESQCVLVYGQMNEPPGARARVALSALTIAEYFRDMEGHDVLLFVDNIFRFTQAGSEVS 274 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + KG++T+V ++ V D+ DP + + Sbjct: 275 ALLGRIPSAVGYQPTLSTEMGALQERI--TSTTKGSVTSVQAIYVPADDLTDPAPATTFA 332 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VLNR+++E G YP VDPL S SR+ D E V+ + ++ +++E +DI Sbjct: 333 HLDATTVLNRAISELGIYPAVDPLDSTSRILDPNVVGPEHYAVARKVQGILQKYKELQDI 392 Query: 390 RLIGG 394 I G Sbjct: 393 IAILG 397 >gi|313631943|gb|EFR99076.1| ATP synthase F1, beta subunit [Listeria seeligeri FSL N1-067] Length = 391 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG ID D+ L +I + P + +TGI+V+D+ P Sbjct: 8 VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 67 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E ++ Sbjct: 68 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 127 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G Sbjct: 128 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 187 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 188 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 245 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393 L R L E+G YP VDPLAS SR +E V++ + L+ R++E +DI I Sbjct: 246 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 305 Query: 394 G 394 G Sbjct: 306 G 306 >gi|291546602|emb|CBL19710.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus sp. SR1/5] Length = 465 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 165/300 (55%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160 GR+ N LG +DG DSL G+ ++ + PP+ Q+ + +TGI+VID+ P Sbjct: 85 LGRLFNVLGDTVDGGDSL-DGEEHW-VIHRDPPSFEEQKPAVEILETGIKVIDLLAPYAK 142 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ ++ + I + VGER RE + + E L+K Sbjct: 143 GGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLEK 202 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDQEHRDVLLFIDNIFRFVQAGSEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI +++ G++T+V +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKE--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E ++ + ++ +++E +DI I G Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEADIVGEEHYEVARRVQEILQKYKELQDIIAILG 380 >gi|193214200|ref|YP_001995399.1| F0F1 ATP synthase subunit beta [Chloroherpeton thalassium ATCC 35110] gi|226740179|sp|B3QUP6|ATPB_CHLT3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|193087677|gb|ACF12952.1| ATP synthase F1, beta subunit [Chloroherpeton thalassium ATCC 35110] Length = 465 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 163/301 (54%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVE-KGFKTGIRVIDIFTPLC 159 GR++N +GKPIDG LG+ + P PA + + + F+TGI+VID+ P Sbjct: 86 LGRMLNVVGKPIDG---LGEVHATKTYSIHRPSPAFDELSTKAEMFETGIKVIDLLEPYS 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G + G+F G+G+GK+ L+ + + + + VGER RE + E+ + Sbjct: 143 RGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWEEMKESGVID 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LTA++IAEYF + + +VLL +D+I RF + E++ G Sbjct: 203 KTALVFGQMNEPPGARARVALTALSIAEYFRDEENRDVLLFVDNIFRFTQAGSEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI +KG+IT+V ++ V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLATEMGALQERI--VSTKKGSITSVQAIYVPADDLTDPAPATTFTHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+RS+AE G YP VDPL S SR+ D D ++ ++ R+++ +DI I Sbjct: 321 TTVLSRSIAELGIYPAVDPLDSTSRILDPNIIGRDHYDTAQAVKQILQRYKDLQDIIAIL 380 Query: 394 G 394 G Sbjct: 381 G 381 >gi|16804567|ref|NP_466052.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes EGD-e] gi|46908701|ref|YP_015090.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes serotype 4b str. F2365] gi|47094108|ref|ZP_00231832.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 4b H7858] gi|47096952|ref|ZP_00234528.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|217963368|ref|YP_002349046.1| ATP synthase F1, beta subunit [Listeria monocytogenes HCC23] gi|224499882|ref|ZP_03668231.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes Finland 1988] gi|224503231|ref|ZP_03671538.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL R2-561] gi|226225077|ref|YP_002759184.1| H+-transporting ATP synthase chain beta [Listeria monocytogenes Clip81459] gi|254825348|ref|ZP_05230349.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL J1-194] gi|254828104|ref|ZP_05232791.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL N3-165] gi|254831048|ref|ZP_05235703.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 10403S] gi|254853942|ref|ZP_05243290.1| atpD [Listeria monocytogenes FSL R2-503] gi|254900333|ref|ZP_05260257.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes J0161] gi|254932229|ref|ZP_05265588.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes HPB2262] gi|254937809|ref|ZP_05269506.1| ATP synthase F1 [Listeria monocytogenes F6900] gi|254994238|ref|ZP_05276428.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-064] gi|255025914|ref|ZP_05297900.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-003] gi|255519775|ref|ZP_05387012.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J1-175] gi|284802967|ref|YP_003414832.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5578] gi|284996108|ref|YP_003417876.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5923] gi|290892692|ref|ZP_06555684.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL J2-071] gi|300764971|ref|ZP_07074959.1| ATP synthase F1, beta subunit [Listeria monocytogenes FSL N1-017] gi|81830121|sp|Q71WP9|ATPB2_LISMF RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|81849742|sp|Q8Y4C1|ATPB2_LISMO RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|16412017|emb|CAD00607.1| atpD [Listeria monocytogenes EGD-e] gi|46881973|gb|AAT05267.1| ATP synthase F1, beta subunit [Listeria monocytogenes serotype 4b str. F2365] gi|47014662|gb|EAL05619.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|47017515|gb|EAL08324.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 4b H7858] gi|217332638|gb|ACK38432.1| ATP synthase F1, beta subunit [Listeria monocytogenes HCC23] gi|225877539|emb|CAS06253.1| Putative H+-transporting ATP synthase chain beta [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258600489|gb|EEW13814.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL N3-165] gi|258607331|gb|EEW19939.1| atpD [Listeria monocytogenes FSL R2-503] gi|258610413|gb|EEW23021.1| ATP synthase F1 [Listeria monocytogenes F6900] gi|284058529|gb|ADB69470.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5578] gi|284061575|gb|ADB72514.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5923] gi|290557752|gb|EFD91274.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL J2-071] gi|293583786|gb|EFF95818.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes HPB2262] gi|293594591|gb|EFG02352.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL J1-194] gi|300514271|gb|EFK41330.1| ATP synthase F1, beta subunit [Listeria monocytogenes FSL N1-017] gi|307572056|emb|CAR85235.1| ATP synthase F1, beta subunit [Listeria monocytogenes L99] gi|328465133|gb|EGF36401.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 1816] gi|328471139|gb|EGF42043.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 220] gi|332312959|gb|EGJ26054.1| ATP synthase subunit beta [Listeria monocytogenes str. Scott A] Length = 473 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG ID D+ L +I + P + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E ++ Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393 L R L E+G YP VDPLAS SR +E V++ + L+ R++E +DI I Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 387 Query: 394 G 394 G Sbjct: 388 G 388 >gi|227824602|ref|ZP_03989434.1| ATP synthase F1 beta subunit [Acidaminococcus sp. D21] gi|226905101|gb|EEH91019.1| ATP synthase F1 beta subunit [Acidaminococcus sp. D21] Length = 492 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 107/315 (33%), Positives = 163/315 (51%), Gaps = 11/315 (3%) Query: 88 FHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGF 145 F G P C GRV N LG+ +D D + I + PA++ Q E K Sbjct: 97 FDTGHPITVPVGKGCLGRVFNVLGEAVDDDPTPVDASEYWPI-HRPAPALSEQSTETKIM 155 Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREV 202 +TGI+V+D+ P G +IG+F G+G+GK+ L+ + + + S VGER RE Sbjct: 156 ETGIKVVDLIAPYALGGKIGLFGGAGVGKTVLIMELIHNVATNHGGYSVFSGVGERTREG 215 Query: 203 REFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 + + + K+ +V +E P R LT +T+AEYF + +VLL +D+I Sbjct: 216 NDLWGEMKESGVIDKTALVYGQMNEPPGARMRVGLTGLTMAEYFRDAMSQDVLLFIDNIF 275 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +EL L ERI + + G+IT+V +V V D+ Sbjct: 276 RFIQAGSEVSALLGRMPSAVGYQPTLANELGALEERI--TSTKNGSITSVQAVYVPADDL 333 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379 DP + S LD VL+R + E G YP VDPLAS SR+ D +E K+ + + Sbjct: 334 TDPAPAATFSHLDATTVLSREIVELGIYPAVDPLASTSRILDPLIIGEEHYKVARGVQEI 393 Query: 380 IHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 394 LQRYKELQDIIAILG 408 >gi|332523894|ref|ZP_08400146.1| ATP synthase F1, beta subunit [Streptococcus porcinus str. Jelinkova 176] gi|332315158|gb|EGJ28143.1| ATP synthase F1, beta subunit [Streptococcus porcinus str. Jelinkova 176] Length = 468 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG ID ++ + D E + K PA + +TGI+VID+ P Sbjct: 89 LGRVFNVLGDTIDLEEPFSE-DAEREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + + + + ++ R+ E +DI I G Sbjct: 326 TNLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|293596677|ref|ZP_05263440.2| ATP synthase F1 [Listeria monocytogenes J2818] gi|293591435|gb|EFF99769.1| ATP synthase F1 [Listeria monocytogenes J2818] gi|308445540|gb|ADO32958.1| AtpD [Listeria monocytogenes] Length = 479 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG ID D+ L +I + P + +TGI+V+D+ P Sbjct: 96 VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E ++ Sbjct: 156 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 215 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G Sbjct: 216 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 275 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 276 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 333 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393 L R L E+G YP VDPLAS SR +E V++ + L+ R++E +DI I Sbjct: 334 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 393 Query: 394 G 394 G Sbjct: 394 G 394 >gi|195402199|ref|XP_002059694.1| ATPsyn-beta [Drosophila virilis] gi|194155908|gb|EDW71092.1| ATPsyn-beta [Drosophila virilis] Length = 506 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 165/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR++N +G+PID + S I ++ P ++ ++ TGI+V+ Sbjct: 110 IRIPVGAETLGRIMNVIGEPIDERGPIPSAKTS-PIHAEAPEFVDMSVEQEILVTGIKVV 168 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P C G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 169 DLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 228 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIF 287 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 345 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 406 LQDYKSLQDIIAILG 420 >gi|315283679|ref|ZP_07871797.1| ATP synthase F1, beta subunit [Listeria marthii FSL S4-120] gi|313612678|gb|EFR86702.1| ATP synthase F1, beta subunit [Listeria marthii FSL S4-120] Length = 473 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG ID D+ L +I + P + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGNTIDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYL 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E ++ Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIE 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIG 393 L R L E+G YP VDPLAS SR +E V++ + L+ R++E +DI I Sbjct: 328 TTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAIL 387 Query: 394 G 394 G Sbjct: 388 G 388 >gi|112791402|gb|ABI21971.1| ATP synthase beta subunit [Erwinia persicina] Length = 421 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 157/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|167743828|ref|ZP_02416602.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 14] Length = 396 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 16/297 (5%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+++ G P GDD D+ + + P + Q+ F TGI+VID+ PL Sbjct: 3 GRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQ 60 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G + +F G+G+GK+ L+ +M R + + +GER RE E + D G L Sbjct: 61 GGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVL 118 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF + E++ Sbjct: 119 GRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLL 178 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP ++ + +D Sbjct: 179 GRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVD 236 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 +VL+R++A EG YP +DP+AS S L D + V+ + +I + E +D+ Sbjct: 237 SMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 293 >gi|163783600|ref|ZP_02178589.1| ATP synthase subunit B [Hydrogenivirga sp. 128-5-R1-1] gi|159881093|gb|EDP74608.1| ATP synthase subunit B [Hydrogenivirga sp. 128-5-R1-1] Length = 477 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 163/300 (54%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N +G+PID + + M + PPA++ Q + + +TGI+VID+ P Sbjct: 97 LGRIFNVVGQPIDDQGPVEAKEYWP--MFREPPALDEQSTKVEILETGIKVIDLLEPYVK 154 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDC-FDK--VIISLVGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ L+ + F K ++ VGER RE + ++E L Sbjct: 155 GGKVGLFGGAGVGKTVLMQELIHNIAKFHKGFSVVVGVGERTREGNDLWLEMKESGVLPY 214 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +E P +R T +T+AEYF +G +VL +D+I RF + E++T G Sbjct: 215 TVMVYGQMNEPPGVRFRVAQTGITMAEYFRDVEGQDVLTFIDNIFRFVQAGSEVSTLLGR 274 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 LP A GY ++ +++ + ERI + +KG+ITAV +V V D+ DP S+ + LD Sbjct: 275 LPSAVGYQPTLNTDVGEVQERI--TSTKKGSITAVQAVYVPADDITDPAPYSIFAHLDAT 332 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL R LAE G YP +DPL S S+ + DE + ++ R++E ++I I G Sbjct: 333 TVLARRLAELGIYPAIDPLESTSKYLAPEFIGDEHYNTAMEVKRILQRYKELQEIIAILG 392 >gi|19745847|ref|NP_606983.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS8232] gi|50913944|ref|YP_059916.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS10394] gi|94990145|ref|YP_598245.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS10270] gi|94994061|ref|YP_602159.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS10750] gi|81822768|sp|Q5XCY0|ATPB_STRP6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81847967|sp|Q8P1K5|ATPB_STRP8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573763|sp|Q1JHN5|ATPB_STRPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573764|sp|Q1J7F9|ATPB_STRPF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|19747995|gb|AAL97482.1| putative proton-translocating ATPase, beta subunit [Streptococcus pyogenes MGAS8232] gi|50903018|gb|AAT86733.1| ATP synthase beta chain [Streptococcus pyogenes MGAS10394] gi|94543653|gb|ABF33701.1| ATP synthase beta chain [Streptococcus pyogenes MGAS10270] gi|94547569|gb|ABF37615.1| ATP synthase beta chain [Streptococcus pyogenes MGAS10750] Length = 468 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|300719162|ref|YP_003743965.1| ATP synthase, F1 complex, beta subunit [Erwinia billingiae Eb661] gi|299064998|emb|CAX62118.1| ATP synthase, F1 complex, beta subunit [Erwinia billingiae Eb661] Length = 460 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 157/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|112791400|gb|ABI21970.1| ATP synthase beta subunit [Erwinia rhapontici] Length = 418 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 157/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEDQSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|76818109|ref|YP_336214.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1710b] gi|126455751|ref|YP_001076682.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1106a] gi|242314092|ref|ZP_04813109.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b] gi|254185911|ref|ZP_04892429.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|254194214|ref|ZP_04900646.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13] gi|254262510|ref|ZP_04953375.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a] gi|123730761|sp|Q3JJN9|ATPB2_BURP1 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|190358219|sp|A3P8M2|ATPB2_BURP0 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|76582582|gb|ABA52056.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710b] gi|126229519|gb|ABN92932.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106a] gi|157933597|gb|EDO89267.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|169650965|gb|EDS83658.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13] gi|242137331|gb|EES23734.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b] gi|254213512|gb|EET02897.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a] Length = 528 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 16/309 (5%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148 G R+ GR+++ G P GDD D+ + + P + Q+ F TG Sbjct: 102 GPIRVPVGDAVLGRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATG 159 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR 203 I+VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE Sbjct: 160 IKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGH 217 Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 E + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ R Sbjct: 218 EMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFR 277 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ Sbjct: 278 FVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFT 335 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 336 DPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVI 395 Query: 381 HRFEETRDI 389 + E +D+ Sbjct: 396 EHYRELQDV 404 >gi|220936460|ref|YP_002515359.1| F0F1 ATP synthase subunit beta [Thioalkalivibrio sp. HL-EbGR7] gi|254808172|sp|B8GRB8|ATPB_THISH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|219997770|gb|ACL74372.1| F0F1 ATP synthase subunit beta [Thioalkalivibrio sp. HL-EbGR7] Length = 459 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 161/302 (53%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157 GRV++ LG P+D GD+ E + + P+ + Q + +TGI+VID+ P Sbjct: 83 LGRVMDVLGNPVDN-----AGDVQTEERWSIHRPAPSFDEQAGSTELLETGIKVIDLLCP 137 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AE+F +G +VL+ +D+I R+ + E++ Sbjct: 198 LDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALL 257 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD Sbjct: 258 GRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLD 315 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 +VL+R +AE G YP VDPL S SR D +E ++ + + R++E +DI I Sbjct: 316 ATVVLSRQIAELGIYPAVDPLDSTSRQLDPQVIGNEHYDTARAVQNTLQRYKELKDIIAI 375 Query: 393 GG 394 G Sbjct: 376 LG 377 >gi|153815545|ref|ZP_01968213.1| hypothetical protein RUMTOR_01781 [Ruminococcus torques ATCC 27756] gi|317502196|ref|ZP_07960370.1| ATP synthase F1 [Lachnospiraceae bacterium 8_1_57FAA] gi|331088761|ref|ZP_08337671.1| ATP synthase subunit beta [Lachnospiraceae bacterium 3_1_46FAA] gi|145847187|gb|EDK24105.1| hypothetical protein RUMTOR_01781 [Ruminococcus torques ATCC 27756] gi|316896405|gb|EFV18502.1| ATP synthase F1 [Lachnospiraceae bacterium 8_1_57FAA] gi|330407284|gb|EGG86787.1| ATP synthase subunit beta [Lachnospiraceae bacterium 3_1_46FAA] Length = 462 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 106/326 (32%), Positives = 172/326 (52%), Gaps = 14/326 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+ +D + + D ++ + PP Q V + +TGI+VID+ P Sbjct: 85 LGRLFNVLGETVDDGEQITDAD--QWVIHRDPPTFEDQSPVVEILETGIKVIDLLAPYAK 142 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ R+ + I + VGER RE + + E L+K Sbjct: 143 GGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVLEK 202 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHRNVLLFIDNIFRFTQAGSEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E ++ + + ++ +++E +DI I G Sbjct: 321 TVLSRKVVEQGIYPAVDPLESSSRILEAEIVGEEHYEVANKVIAILQKYKELQDIIAILG 380 Query: 395 YRPGVDLILDKA-VHQVPIIYDFLKQ 419 D DKA V + I FL Q Sbjct: 381 MEELSD--EDKATVMRARKIQKFLSQ 404 >gi|304407760|ref|ZP_07389411.1| ATP synthase F1, beta subunit [Paenibacillus curdlanolyticus YK9] gi|304343243|gb|EFM09086.1| ATP synthase F1, beta subunit [Paenibacillus curdlanolyticus YK9] Length = 468 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 164/302 (54%), Gaps = 11/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG PID + ++ + ++ I + P ++ +TGI+VID+ P Sbjct: 90 ATLGRVFNVLGDPIDNNGAVDR-SIANPIHRQAPEFEELSTQQEMLETGIKVIDLMAPYA 148 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214 G +IG+F G+G+GK+ + + + IS+ VGER RE + + + D+ + Sbjct: 149 KGGKIGLFGGAGVGKTVTMQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSGVI 207 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 208 AKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDVEGRDVLLFVDNIFRFTQAGSEVSALL 267 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 268 GRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLD 325 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R++A G +P VDPLAS SR L + + ++ S+ ++ R++E DI I Sbjct: 326 ATTNLERNIAAMGIFPAVDPLASSSRILTPEILGEEHYQVAQSVKKILQRYKELLDIIAI 385 Query: 393 GG 394 G Sbjct: 386 LG 387 >gi|206558440|ref|YP_002229200.1| F0F1 ATP synthase subunit beta [Burkholderia cenocepacia J2315] gi|226740103|sp|B4EEY9|ATPB_BURCJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|198034477|emb|CAR50342.1| ATP synthase beta chain [Burkholderia cenocepacia J2315] Length = 464 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D++ I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-DSDVTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382 >gi|304398017|ref|ZP_07379892.1| ATP synthase F1, beta subunit [Pantoea sp. aB] gi|308188719|ref|YP_003932850.1| membrane-bound ATP synthase, F1 sector, beta- subunit [Pantoea vagans C9-1] gi|304354303|gb|EFM18675.1| ATP synthase F1, beta subunit [Pantoea sp. aB] gi|308059229|gb|ADO11401.1| membrane-bound ATP synthase, F1 sector, beta- subunit [Pantoea vagans C9-1] Length = 465 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 160/304 (52%), Gaps = 11/304 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMS---KVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID L + D S +EI S P ++ ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGEPIDMKGELKEEDGSAVEIASIHRAAPSYEDQSNSQELLETGIKVIDLM 142 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 143 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDS 202 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 203 NVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 262 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 320 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD + L+R +A G YP VDPL S SR D E V+ + L+ R++E +DI Sbjct: 321 LDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDII 380 Query: 391 LIGG 394 I G Sbjct: 381 AILG 384 >gi|215434282|gb|ACJ66829.1| ATP synthase F1 beta subunit [uncultured bacterium pSY1435] Length = 463 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/293 (34%), Positives = 152/293 (51%), Gaps = 10/293 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRVI+ LG+P+DG L +G ++ P RQ F TG++V+D+F PL G Sbjct: 90 GRVIDMLGRPLDGGPVL-EGP-RWPLLRPAQPLAERQVARSIFTTGLKVVDLFAPLPRGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 G+F G+G+GK+ L+ + + + VGER RE RE ++E + L +V Sbjct: 148 NTGLFGGAGVGKTVLMMELMHNTVHHHHGATVFAGVGERSREARELWLEMAESNVLPNAV 207 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277 +V E+P +R A+TIAEYF + +VL+ +D++ RF + E++ G P Sbjct: 208 LVFGQMGETPGIRFRTAAAALTIAEYFRDEQRVDVLVFMDNVFRFVQAGNEVSGMLGRSP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ E+ L ERI + IT+V +V V D+ DP + LD +V Sbjct: 268 SRVGYQPTLAQEVAELEERI--ASTPHAAITSVQAVYVPADDITDPAVAEIFQHLDAFVV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L+R A EG YP VDPLAS S L + K+ S+ ++ ++EE RDI Sbjct: 326 LSREAAAEGLYPAVDPLASSSTLLVAEIVGERHAKVASAARAVLAKYEELRDI 378 >gi|112791398|gb|ABI21969.1| ATP synthase beta subunit [Pantoea agglomerans] Length = 425 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 160/304 (52%), Gaps = 11/304 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMS---KVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID L + D S +EI S P ++ ++ +TGI+VID+ Sbjct: 57 ATLGRIMNVLGEPIDMKGELKEEDGSAVEIASIHRAAPSYEDQSNSQELLETGIKVIDLM 116 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 117 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYHEMTDS 176 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 177 NVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 236 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 237 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 294 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD + L+R +A G YP VDPL S SR D E V+ + L+ R++E +DI Sbjct: 295 LDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQELKDII 354 Query: 391 LIGG 394 I G Sbjct: 355 AILG 358 >gi|284049042|ref|YP_003399381.1| ATP synthase F1, beta subunit [Acidaminococcus fermentans DSM 20731] gi|283953263|gb|ADB48066.1| ATP synthase F1, beta subunit [Acidaminococcus fermentans DSM 20731] Length = 491 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 108/340 (31%), Positives = 169/340 (49%), Gaps = 9/340 (2%) Query: 62 VIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLG 120 V I D+V + + ++ G G+ P C GRV N LG+ +D D + Sbjct: 70 VQHIGHDVVRTVAMSSTDGLTRGMEALDTGKPITVPVGKGCLGRVFNVLGETVDDDPTPV 129 Query: 121 KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSM 180 + I P ++ K +TGI+V+D+ P G +IG+F G+G+GK+ L+ Sbjct: 130 QASDYWPIHRPAPDLADQATETKIMETGIKVVDLIAPYSLGGKIGLFGGAGVGKTVLIME 189 Query: 181 FARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPL 236 + + + S VGER RE + + + K+ +V +E P R L Sbjct: 190 LIHNVATNHGGYSVFSGVGERTREGNDLWGEMKESGVIDKTALVYGQMNEPPGARMRVGL 249 Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 T +T+AEYF G +VLL +D+I RF + E++ G +P A GY ++ +E+ L E Sbjct: 250 TGLTMAEYFRDVGGQDVLLFIDNIFRFIQAGSEVSALLGRMPSAVGYQPTLANEMGALEE 309 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPLA Sbjct: 310 RI--TSTRSGSITSVQAVYVPADDLTDPAPAATFAHLDATTVLSREIVELGIYPAVDPLA 367 Query: 356 SVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 S SR+ D DE V+ + ++ R++E +DI I G Sbjct: 368 STSRILDPLVIGDEHYQVARGVQKILQRYKELQDIIAILG 407 >gi|112791394|gb|ABI21967.1| ATP synthase beta subunit [Pantoea ananatis] Length = 426 Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 160/309 (51%), Gaps = 21/309 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---------PPAMNRQRVEKGFKTGIR 150 GR++N LG+PID KGDL+ E S V P ++ ++ +TGI+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDLTEEDGSAVEVSSIHRPAPSYEDQSNSQELLETGIK 112 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207 VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE +F Sbjct: 113 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 172 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + Sbjct: 173 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 232 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP Sbjct: 233 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 290 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + + LD + L+R +A G YP VDPL S SR D E V+ + L+ R++E Sbjct: 291 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 350 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 351 LKDIIAILG 359 >gi|195977927|ref|YP_002123171.1| F0F1 ATP synthase subunit beta [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225868741|ref|YP_002744689.1| ATP synthase beta chain [Streptococcus equi subsp. zooepidemicus] gi|225870303|ref|YP_002746250.1| ATP synthase beta chain [Streptococcus equi subsp. equi 4047] gi|226740677|sp|B4U2E1|ATPB_STREM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808165|sp|C0M720|ATPB_STRE4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|259585453|sp|C0MH17|ATPB_STRS7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|195974632|gb|ACG62158.1| ATP synthase beta chain AtpD [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|225699707|emb|CAW93438.1| ATP synthase beta chain [Streptococcus equi subsp. equi 4047] gi|225702017|emb|CAW99601.1| ATP synthase beta chain [Streptococcus equi subsp. zooepidemicus] Length = 468 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 161/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG+ ID + D++ E + K PA + +TGI+VID+ P Sbjct: 89 LGRVFNVLGETIDLEAPFAD-DVNREPIHKKAPAFDELSTSSEILETGIKVIDLLAPYLK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 326 TNLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|320539769|ref|ZP_08039430.1| F1 sector of membrane-bound ATP synthase, beta subunit [Serratia symbiotica str. Tucson] gi|320030172|gb|EFW12190.1| F1 sector of membrane-bound ATP synthase, beta subunit [Serratia symbiotica str. Tucson] Length = 460 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+G+ I P ++ +TGI+V+D+ P Sbjct: 83 ATLGRIMNVLGEPIDMKGHIGEGE-RWAIHRPAPSYEELSSSQELLETGIKVMDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|242023574|ref|XP_002432207.1| ATP synthase subunit beta, putative [Pediculus humanus corporis] gi|212517604|gb|EEB19469.1| ATP synthase subunit beta, putative [Pediculus humanus corporis] Length = 550 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 17/314 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 RI A GR++N +G+PID + K D I ++ P ++ ++ TGI+V+D Sbjct: 156 RIPVGAETLGRIMNVIGEPIDERGPI-KTDKFAAIHAEAPEFVDMSVEQEILVTGIKVVD 214 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205 + P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 215 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEM 273 Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I R Sbjct: 274 IESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 333 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 334 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLT 391 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLI 380 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + ++ Sbjct: 392 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKIL 451 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 452 QDYKSLQDIIAILG 465 >gi|253574262|ref|ZP_04851604.1| ATP synthase F1, beta subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251846739|gb|EES74745.1| ATP synthase F1, beta subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 463 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 167/306 (54%), Gaps = 17/306 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVE-KGFKTGIRVIDI 154 + RV N LG+PID KG+ + E+ + + PP + + +TGI+VID+ Sbjct: 84 SATLSRVFNVLGEPIDN-----KGEANSELRYPIHREPPKFEDLSTQAEMLETGIKVIDL 138 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYL 210 P G +IG+F G+G+GK+ + + + IS+ VGER RE + ++E Sbjct: 139 LAPYAKGGKIGLFGGAGVGKTVTIQELIHNIAQEHGGISVFAGVGERTREGNDLYMEMTE 198 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 ++K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 199 SGVIEKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGRDVLLFIDNIFRFTQAGSEV 258 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + Sbjct: 259 SALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTF 316 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRD 388 + LD L R ++E+G +P VDPLAS SR+ +E V+ + ++ R++E +D Sbjct: 317 AHLDATTNLERKISEKGIFPAVDPLASSSRILTPEIVGEEHYAVAQGVKQILARYKELQD 376 Query: 389 IRLIGG 394 I I G Sbjct: 377 IIAILG 382 >gi|256823841|ref|YP_003147804.1| ATP synthase F1 subunit beta [Kangiella koreensis DSM 16069] gi|256797380|gb|ACV28036.1| ATP synthase F1, beta subunit [Kangiella koreensis DSM 16069] Length = 458 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 158/298 (53%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID +G+ + M I K P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGEPIDQKGPIGEKE-RMSIHRKAPKLEELAPANELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLVIGSEHYDVARGVQGVLQRYKELKDIIAILG 377 >gi|114765102|ref|ZP_01444247.1| ATP synthase F1, beta subunit [Pelagibaca bermudensis HTCC2601] gi|114542506|gb|EAU45532.1| ATP synthase F1, beta subunit [Roseovarius sp. HTCC2601] Length = 463 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 162/307 (52%), Gaps = 12/307 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G + GR+++ G+ D L + I + PP R + F+TGI+ Sbjct: 70 GPLTVPVGGAVLGRLLDVTGRTGDRKGPLPEEAPRRAIHAAPPPLRARGGASEPFRTGIK 129 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREF 205 V+D+ TPL G + +F G+G+GK+ L+ SM A D + S +GER RE E Sbjct: 130 VVDLLTPLAQGGKAAMFGGAGVGKTVLVMELIHSMVAGYDGIS--VFSGIGERSREGHEM 187 Query: 206 IEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 + D L ++V+V +E P R P+TA+TIAE+F ++ NVLL++D++ RF Sbjct: 188 LLDMTEAGVLDRTVLVYGQMNEPPGARWRVPMTALTIAEHFRDAEQKNVLLLMDNVFRFV 247 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP GY ++ +E+ L ERI + + ++TA+ +V V D+ DP Sbjct: 248 QAGSEVSGLLGRLPSRVGYQPTLATEVADLQERI--ASVGEASVTAIEAVYVPADDFTDP 305 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 ++ +D +VL+R++A +G YP VDP+AS S L D +E ++ + + I Sbjct: 306 AVVAIAGHVDSMVVLSRAMAADGMYPSVDPIASSSILLDPLLVGEEHVRIANEVRRSIEH 365 Query: 383 FEETRDI 389 + E +D+ Sbjct: 366 YRELQDV 372 >gi|15674808|ref|NP_268982.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes M1 GAS] gi|71910394|ref|YP_281944.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS5005] gi|81856117|sp|Q9A0I7|ATPB_STRP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|13621938|gb|AAK33703.1| putative proton-translocating ATPase, beta subunit [Streptococcus pyogenes M1 GAS] gi|71853176|gb|AAZ51199.1| ATPase, beta subunit [Streptococcus pyogenes MGAS5005] Length = 468 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|21910035|ref|NP_664303.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS315] gi|28896267|ref|NP_802617.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes SSI-1] gi|71903225|ref|YP_280028.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS6180] gi|94988266|ref|YP_596367.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS9429] gi|94992140|ref|YP_600239.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes MGAS2096] gi|306827633|ref|ZP_07460913.1| ATP synthase F1 sector beta subunit [Streptococcus pyogenes ATCC 10782] gi|81847483|sp|Q8K826|ATPB_STRP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573761|sp|Q1JCL3|ATPB_STRPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573762|sp|Q1JMI9|ATPB_STRPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573765|sp|Q48UD3|ATPB_STRPM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21904225|gb|AAM79106.1| putative proton-translocating ATPase beta subunit [Streptococcus pyogenes MGAS315] gi|28811518|dbj|BAC64450.1| putative proton-translocating ATPase, beta subunit [Streptococcus pyogenes SSI-1] gi|71802320|gb|AAX71673.1| ATPase, beta subunit [Streptococcus pyogenes MGAS6180] gi|94541774|gb|ABF31823.1| ATP synthase beta chain [Streptococcus pyogenes MGAS9429] gi|94545648|gb|ABF35695.1| ATP synthase beta chain [Streptococcus pyogenes MGAS2096] gi|304430196|gb|EFM33225.1| ATP synthase F1 sector beta subunit [Streptococcus pyogenes ATCC 10782] Length = 468 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|292670131|ref|ZP_06603557.1| ATP synthase F1 sector subunit beta [Selenomonas noxia ATCC 43541] gi|292648230|gb|EFF66202.1| ATP synthase F1 sector subunit beta [Selenomonas noxia ATCC 43541] Length = 470 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 159/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+P+D + + S I P N++ + +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGEPVDHNPAPVGNKESWPIHRPAPKFDNQETSTQILETGIKVVDLIAPYS 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + + + VGER RE + + + Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAGVGERTREGNDLWSEMTESGVID 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 207 KTALVYGQMNEPPGARMRVGLTGLTMAEYFRDVQGQDVLLFIDNIFRFIQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +++ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 267 RMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFTHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 VL+R +AE G YP VDPL S SR+ D E ++ + ++ +++E +DI I Sbjct: 325 TTVLSRQIAELGIYPAVDPLDSTSRILDPLVIGQEHYEVARGVQAVLQKYKELQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|291615580|ref|YP_003518322.1| AtpD [Pantoea ananatis LMG 20103] gi|291150610|gb|ADD75194.1| AtpD [Pantoea ananatis LMG 20103] Length = 473 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 160/309 (51%), Gaps = 21/309 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---------PPAMNRQRVEKGFKTGIR 150 GR++N LG+PID KGDL+ E S V P ++ ++ +TGI+ Sbjct: 91 ATLGRIMNVLGEPIDM-----KGDLTEEDGSAVEVSSIHRPAPSYEDQSNSQELLETGIK 145 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207 VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE +F Sbjct: 146 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 205 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + Sbjct: 206 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 265 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP Sbjct: 266 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 323 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + + LD + L+R +A G YP VDPL S SR D E V+ + L+ R++E Sbjct: 324 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 383 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 384 LKDIIAILG 392 >gi|115345328|ref|NP_001041705.1| H+ transporting ATP synthase beta subunit isoform 2 [Bombyx mori] gi|95102940|gb|ABF51411.1| H+ transporting ATP synthase beta subunit isoform 2 [Bombyx mori] Length = 513 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 165/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P ++ ++ TGI+V+ Sbjct: 118 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVV 176 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 177 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 235 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 236 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 295 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 296 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 353 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 354 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKI 413 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 414 LQDYKSLQDIIAILG 428 >gi|312865035|ref|ZP_07725263.1| ATP synthase F1, beta subunit [Streptococcus downei F0415] gi|311099146|gb|EFQ57362.1| ATP synthase F1, beta subunit [Streptococcus downei F0415] Length = 468 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEEPFAQDAQREPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYGEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + ++ + + ++ R+ E +DI I G Sbjct: 327 NLERKLTQIGIYPAVDPLASSSRALAPEIVGEEHYQVATEVQRVLQRYNELQDIIAILG 385 >gi|148360282|ref|YP_001251489.1| ATP synthase F1 subunit beta [Legionella pneumophila str. Corby] gi|148282055|gb|ABQ56143.1| ATP synthase F1, beta chain [Legionella pneumophila str. Corby] Length = 474 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 164/313 (52%), Gaps = 10/313 (3%) Query: 84 GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G +V+ G RI S GR++N G+P+DG L + ++++ P E Sbjct: 85 GLIVYDQGTSLRIPVSKECLGRLLNIFGEPLDGAPPLETHEYR-DVLANFAPLEMTSTQE 143 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERG 199 +TGI+VID+ P G + G+F G+G+GK+ LL M A + + VGER Sbjct: 144 TILETGIKVIDLLCPFVRGCKTGLFGGAGVGKTVLLMELMHAIIQLHQGTSVFAGVGERI 203 Query: 200 REVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257 RE E + + K+++V DESP +R L+A+T AEY + G VL ++D Sbjct: 204 REGHELWHEMKSAGVMDKTLMVFGQMDESPGVRFRTGLSALTYAEYLRDTLGHEVLFLVD 263 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + EI+ G +P + GY ++ +E+ L ER+ + KG +T+V +V V Sbjct: 264 NIYRFVQAGSEISGLLGRMPASVGYQPTLMTEIAELEERM--TSTAKGAVTSVQAVYVPA 321 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSL 376 D+ +DP + + LD IVL+R+ A +G YP VDPLAS S+ DK + + ++ Sbjct: 322 DDMSDPAVTGIITHLDSIIVLSRAQAGKGIYPAVDPLASKSQFMDKILLGERHYSIAQAV 381 Query: 377 THLIHRFEETRDI 389 + R++E D+ Sbjct: 382 REHLERYQELEDM 394 >gi|327395850|dbj|BAK13272.1| ATP synthase beta chain AtpD [Pantoea ananatis AJ13355] Length = 465 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 160/309 (51%), Gaps = 21/309 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---------PPAMNRQRVEKGFKTGIR 150 GR++N LG+PID KGDL+ E S V P ++ ++ +TGI+ Sbjct: 83 ATLGRIMNVLGEPIDM-----KGDLTEEDGSAVEVSSIHRPAPSYEDQSNSQELLETGIK 137 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207 VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE +F Sbjct: 138 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 197 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + Sbjct: 198 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 257 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP Sbjct: 258 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 315 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + + LD + L+R +A G YP VDPL S SR D E V+ + L+ R++E Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 375 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 376 LKDIIAILG 384 >gi|322411477|gb|EFY02385.1| F0F1 ATP synthase subunit beta [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 468 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|218248404|ref|YP_002373775.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 8801] gi|257061470|ref|YP_003139358.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 8802] gi|226740186|sp|B7K2R8|ATPB_CYAP8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|218168882|gb|ACK67619.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 8801] gi|256591636|gb|ACV02523.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 8802] Length = 483 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 170/327 (51%), Gaps = 24/327 (7%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQR 140 D+V + GR+ N LG+P+D KGD+ M + S + P ++ + Sbjct: 80 DIVDTGAPISVPVGKVTLGRIFNVLGEPVDE-----KGDVDMSLTSPIHRPAPKLIDLET 134 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGE 197 K F+TGI+VID+ TP G +IG+F G+G+GK+ ++ + + +S+ VGE Sbjct: 135 KPKVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAINHGGVSVFAGVGE 194 Query: 198 RGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248 R RE E IE + DN ++S +V +E P R L+ +T+AEYF Sbjct: 195 RTREGNDLYNEMIESKVINPDNPEESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVN 254 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 +VLL +D+I RF + E++ G +P A GY ++ +++ L ERI + ++G+IT Sbjct: 255 KQDVLLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSIT 312 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 +V +V V D+ DP + + LDG VL+R LA +G YP VDPL S S + + Sbjct: 313 SVQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQPGIVGE 372 Query: 369 EK-KLVSSLTHLIHRFEETRDIRLIGG 394 E ++ + R++E +DI I G Sbjct: 373 EHYNTARAVQSTLQRYKELQDIIAILG 399 >gi|167821014|ref|ZP_02452694.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 91] Length = 426 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 16/297 (5%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+++ G P GDD D+ + + P + Q+ F TGI+VID+ PL Sbjct: 12 GRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQ 69 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G + +F G+G+GK+ L+ +M R + + +GER RE E + D G L Sbjct: 70 GGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVL 127 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF + E++ Sbjct: 128 GRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLL 187 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP ++ + +D Sbjct: 188 GRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVD 245 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 +VL+R++A EG YP +DP+AS S L D + V+ + +I + E +D+ Sbjct: 246 SMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 302 >gi|112791406|gb|ABI21973.1| ATP synthase beta subunit [Erwinia pyrifoliae DSM 12163] Length = 421 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ + +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|46909259|gb|AAT06147.1| ATP synthase beta subunit [Modiolus americanus] Length = 427 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G PID + D + I ++ P + ++ +TGI+V+ Sbjct: 55 IRIPVGPATLGRIINVVGDPIDERGPVNT-DKYLSIHAEAPDFVEMSVQQEVLETGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE + + Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172 Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 173 MITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR+ D +E V+ S+ + Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSNSRILDPYVVGEEHYAVARSIQKI 350 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 351 LQNYKSLQDIIAILG 365 >gi|330723367|gb|AEC45737.1| F0F1 ATP synthase subunit beta [Mycoplasma hyorhinis MCLD] Length = 470 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 104/297 (35%), Positives = 159/297 (53%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LGK ID + L EI S P ++++ + TGI+VID+ P G + Sbjct: 96 RMFNVLGKVIDEKPAPVFEQLK-EIHSPAPSYVDQKASSEILVTGIKVIDLLIPFVKGGK 154 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ + +S+ VGER RE + + E L K+ + Sbjct: 155 IGLFGGAGVGKTVLVQELINNVATQHGGLSVFAGVGERSREGNDLYFEMEAAGVLDKTAL 214 Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 215 VFGQMNEPPGARMRVALSALTMAEYFRDQENQDVLLFIDNIFRFTQAGSEVSTLLGRIPS 274 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 GY ++ +E+ +L ERI + + G+IT+V +V V D+ DP + S LD VL Sbjct: 275 TVGYQPTLATEMGQLQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFSHLDAKTVL 332 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R++A G YP VDPLAS SR+ D E V+ + + RF+E +DI I G Sbjct: 333 DRNIASLGIYPAVDPLASGSRILDPLIVGQEHYNVARQVIQTLQRFKELQDIIAILG 389 >gi|251782142|ref|YP_002996444.1| F0F1 ATP synthase subunit beta [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390771|dbj|BAH81230.1| ATP synthase beta chain [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 468 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|167850850|ref|ZP_02476358.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei B7210] Length = 418 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 16/297 (5%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+++ G P GDD D+ + + P + Q+ F TGI+VID+ PL Sbjct: 4 GRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQ 61 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G + +F G+G+GK+ L+ +M R + + +GER RE E + D G L Sbjct: 62 GGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVL 119 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF + E++ Sbjct: 120 GRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLL 179 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP ++ + +D Sbjct: 180 GRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVD 237 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 +VL+R++A EG YP +DP+AS S L D + V+ + +I + E +D+ Sbjct: 238 SMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 294 >gi|139474050|ref|YP_001128766.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes str. Manfredo] gi|166222419|sp|A2RFC2|ATPB_STRPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134272297|emb|CAM30551.1| ATP synthase beta chain [Streptococcus pyogenes str. Manfredo] gi|323126996|gb|ADX24293.1| F0F1 ATP synthase subunit beta [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 468 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|114052072|ref|NP_001040450.1| H+ transporting ATP synthase beta subunit isoform 1 [Bombyx mori] gi|95102938|gb|ABF51410.1| H+ transporting ATP synthase beta subunit isoform 1 [Bombyx mori] Length = 516 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 165/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P ++ ++ TGI+V+ Sbjct: 121 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVV 179 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 180 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 238 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 239 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 298 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 299 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 356 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 357 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKI 416 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 417 LQDYKSLQDIIAILG 431 >gi|30248230|ref|NP_840300.1| F0F1 ATP synthase subunit beta [Nitrosomonas europaea ATCC 19718] gi|81838782|sp|Q82XP8|ATPB_NITEU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|30180115|emb|CAD84117.1| FoF1-type ATP synthase beta subunit [Nitrosomonas europaea ATCC 19718] Length = 460 Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 151/298 (50%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID +G L M I P + +TGI+VID+ P G Sbjct: 84 LGRIMDVLGRPIDEMGEIGANSL-MPIHRAAPAFDELSASTELLETGIKVIDLVCPFAKG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 143 GKIGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 202 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 203 ALVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 262 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 263 SAVGYQPTLAEEMGRLQERI--TSSKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVV 320 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D D + + R++E RDI I G Sbjct: 321 LSRDIASLGIYPAVDPLDSTSRQLDPLIIGEDHYNTAREVQQTLQRYKELRDIIAILG 378 >gi|255281451|ref|ZP_05346006.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469] gi|255267939|gb|EET61144.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469] Length = 466 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 107/323 (33%), Positives = 167/323 (51%), Gaps = 10/323 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ ID ++ KG+ + I K P + + +TGI+VID+ P G Sbjct: 86 GRMFNVLGEAIDEKET-PKGEETWCIHRKAPAFEKQSPAVEILETGIKVIDLLAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ + + I + VGER RE + ++E L K+ Sbjct: 145 KIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGNDLYLEMKDSGVLDKTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF K +VLL +D+I RF + E++ G +P Sbjct: 205 LVFGQMNEVPGARMRVAQTGLTMAEYFRDKKQQDVLLFIDNIYRFVQAGSEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +EL L ERI + G+IT+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLANELGELQERI--TSTTDGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R + E+G YP VDPL S SR+ + +E + L+ +++E +DI I G Sbjct: 323 LSRKIVEQGIYPAVDPLESSSRILEAEIVGEEHYDTAMKVQQLLQKYQELQDIISILGMD 382 Query: 397 PGVDLILDKAVHQVPIIYDFLKQ 419 +D AV++ I FL Q Sbjct: 383 E-LDEEDKTAVYRARKIQKFLSQ 404 >gi|217422042|ref|ZP_03453545.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576] gi|217394273|gb|EEC34292.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576] Length = 538 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 16/309 (5%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148 G R+ GR+++ G P GDD D+ + + P + Q+ F TG Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATG 165 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR 203 I+VID+ PL G + +F G+G+GK+ L+ +M R + + +GER RE Sbjct: 166 IKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGH 223 Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 E + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ R Sbjct: 224 EMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFR 283 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ Sbjct: 284 FVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFT 341 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 342 DPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVI 401 Query: 381 HRFEETRDI 389 + E +D+ Sbjct: 402 EHYRELQDV 410 >gi|325264571|ref|ZP_08131301.1| ATP synthase F1, beta subunit [Clostridium sp. D5] gi|324030233|gb|EGB91518.1| ATP synthase F1, beta subunit [Clostridium sp. D5] Length = 465 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+ ID + + ++ + PP+ Q V + +TGI+VID+ P Sbjct: 85 LGRLFNVLGETIDDGEPVNSD--KKWVIHRDPPSFEDQSPVIEVLETGIKVIDLLAPYAK 142 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ R+ + I + VGER RE + + L+K Sbjct: 143 GGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWTEMKASGVLEK 202 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFTQAGSEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + G++T+V +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTRN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E ++ + +T ++ +++E +DI I G Sbjct: 321 TVLSRKIVEQGIYPAVDPLESNSRILEADIVGEEHYEVANQVTAILQKYKELQDIIAILG 380 >gi|112791338|gb|ABI21939.1| ATP synthase beta subunit [Enterobacter cloacae subsp. dissolvens] Length = 421 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|332702727|ref|ZP_08422815.1| ATP synthase subunit beta [Desulfovibrio africanus str. Walvis Bay] gi|332552876|gb|EGJ49920.1| ATP synthase subunit beta [Desulfovibrio africanus str. Walvis Bay] Length = 467 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 161/299 (53%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + D + + PA Q + + +TGI+V+D+ P G Sbjct: 91 GRIMNVVGRPVDELGPVAAKDFWP--IHRPAPAFTEQSTKVEVLETGIKVVDLLIPFPKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ +L + K + + VGER RE + + L K+ Sbjct: 149 GKMGLFGGAGVGKTVILMEMINNIAKQHGGKSVFAGVGERTREGNDLYHEMKDAGVLPKA 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 ++ +E P R LTA+T+AEYF G++VLL +D+I RF + E++ G + Sbjct: 209 ALIYGQMNEPPGARARVALTALTVAEYFRDVDGEDVLLFVDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + + LDG + Sbjct: 269 PSAVGYQPTLGTDLGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDGTL 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D + ++ ++ ++++ +DI I G Sbjct: 327 VLSRQIAELGIYPAVDPLDSTSRILDPNVLGVEHYGTARAVQQILQKYKDLQDIIAILG 385 >gi|112791372|gb|ABI21956.1| ATP synthase beta subunit [Brenneria nigrifluens] Length = 421 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ D I + P ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGEPVDMKGDIGEED-RWAIHREAPSYEELSSSQELLETGIKVIDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|188535583|ref|YP_001909380.1| F0F1 ATP synthase subunit beta [Erwinia tasmaniensis Et1/99] gi|226740200|sp|B2VCA4|ATPB_ERWT9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|188030625|emb|CAO98521.1| ATP synthase, F1 complex, beta subunit [Erwinia tasmaniensis Et1/99] Length = 460 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ + +TGI+VID+ Sbjct: 83 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|77964181|gb|ABB13426.1| ATP synthase subunit beta [Clostridium paradoxum] Length = 465 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 157/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG P+D + + I P +++ + +TGI+V+D+ P G Sbjct: 88 LGRIFNVLGDPVDNKPEVEDAP-KLPIHRPAPSFEDQETATEILETGIKVVDLIAPYAKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + + S VGER RE + + + + K+ Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNIAKEHGGLSVFSGVGERTREGNDLYHEMIDSGVIDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 TLVYGQMNEPPGARMRVALTGLTMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +A G YP VDPL S SR+ D E ++ + ++ R++E +DI I G Sbjct: 325 VLSRQIAALGIYPAVDPLDSTSRILDPNIVGREHYEVARGVQSVLQRYKELQDIIAILG 383 >gi|167748908|ref|ZP_02421035.1| hypothetical protein ANACAC_03682 [Anaerostipes caccae DSM 14662] gi|317472680|ref|ZP_07931995.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA] gi|167651530|gb|EDR95659.1| hypothetical protein ANACAC_03682 [Anaerostipes caccae DSM 14662] gi|316899857|gb|EFV21856.1| ATP synthase F1 [Anaerostipes sp. 3_2_56FAA] Length = 466 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 105/325 (32%), Positives = 172/325 (52%), Gaps = 12/325 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+ IDG + + +G+ ++ + PP Q V + +TGI+VID+ P Sbjct: 85 LGRMFNVLGQNIDGKEQV-EGE-EQWVIHRDPPTFEEQSPVVEILETGIKVIDLLAPYAK 142 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ L+ + + I + VGER RE + + E + K Sbjct: 143 GGKVGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWTEMNESGVIDK 202 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF + NVLL +D+I R+ + E++ G Sbjct: 203 TALVFGQMNEPPGARMRVAQTGLTMAEYFRDREHQNVLLFIDNIFRYVQAGSEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLANEVGELQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E V+ + L+ +++E +DI I G Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEAEVVGEEHYEVAMQVQELLQKYKELQDIISILG 380 Query: 395 YRPGVDLILDKAVHQVPIIYDFLKQ 419 +D AV++ I FL Q Sbjct: 381 MEE-LDEDDKLAVYRARKIQKFLSQ 404 >gi|310765896|gb|ADP10846.1| F0F1 ATP synthase subunit beta [Erwinia sp. Ejp617] Length = 435 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ + +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|313112899|ref|ZP_07798545.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii KLE1255] gi|310624804|gb|EFQ08113.1| ATP synthase F1, beta subunit [Faecalibacterium cf. prausnitzii KLE1255] Length = 464 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 159/305 (52%), Gaps = 10/305 (3%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GRV N LG+P+D + + I P +Q + +TGI+V+D+ Sbjct: 82 PVGDQCLGRVFNLLGEPVDNKPAPAP-EAYWPIHRPAPSYEEQQSTTEILETGIKVVDLI 140 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + + + + VGER RE + + Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGERTREGNDLYGEMTES 200 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + K+ +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ Sbjct: 201 GVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFT 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R +A +G YP VDPL S SR L+ + + ++ ++ ++ R++E +DI Sbjct: 319 HLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIARAVQKVLQRYKELQDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAIMG 383 >gi|289209746|ref|YP_003461812.1| ATP synthase F1 subunit beta [Thioalkalivibrio sp. K90mix] gi|288945377|gb|ADC73076.1| ATP synthase F1, beta subunit [Thioalkalivibrio sp. K90mix] Length = 458 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/302 (32%), Positives = 160/302 (52%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157 GRV++ LG+P+D GD+ + + + P + Q + +TGI+VID+ P Sbjct: 82 LGRVMDVLGRPVDN-----AGDVEAQETWSIHRAAPTFDEQAGSTELLETGIKVIDLLCP 136 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N Sbjct: 137 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNV 196 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AE+F +G +VL+ +D+I R+ + E++ Sbjct: 197 LDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALL 256 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD Sbjct: 257 GRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLD 314 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 +VL+R +AE G YP VDPL S SR D E ++ + + R++E +DI I Sbjct: 315 ATVVLSRQIAELGIYPAVDPLDSTSRQLDPQIIGQEHYDTARAVQNTLQRYKELKDIIAI 374 Query: 393 GG 394 G Sbjct: 375 LG 376 >gi|112791340|gb|ABI21940.1| ATP synthase beta subunit [Enterobacter aerogenes] Length = 421 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|320409261|gb|ADW27221.1| ATP synthase beta subunit [Phoronis architecta] Length = 365 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 98/282 (34%), Positives = 153/282 (54%), Gaps = 16/282 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID + K D+ + I + P ++ ++ TGI+V+ Sbjct: 22 IRIPVGPATLGRIINVIGEPIDERGPV-KADVYLPIHQEAPEFVDMSTDQEILVTGIKVV 80 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 81 DLLAPYAKGGKIGLFGGAGVGKTILIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 139 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 IE L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 140 MIESGVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDYEGQDVLLFIDNIF 199 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 200 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 257 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD + VL+R +AE G YP VDPL S SR+ D Sbjct: 258 TDPAPATTFAHLDANTVLSRGIAELGIYPAVDPLDSSSRILD 299 >gi|269958748|ref|YP_003328535.1| F0F1 ATP synthase subunit beta [Anaplasma centrale str. Israel] gi|269848577|gb|ACZ49221.1| F0F1 ATP synthase subunit beta [Anaplasma centrale str. Israel] Length = 501 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 110/344 (31%), Positives = 181/344 (52%), Gaps = 24/344 (6%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + +S GD + G ++P GRV + LG+PIDG S+ D+ Sbjct: 81 VVRCVAMGSTDSLSRGDKFVNTGNQMLAPVGRGTLGRVFDVLGRPIDGLGSVSS-DVEFR 139 Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182 + P+++ QRV + TGI+V+D+ P G ++G+F G+G+GK+ L+S A Sbjct: 140 PIHAKAPSLSEQRVAAEVLVTGIKVVDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNVA 199 Query: 183 RSDCFDKVIISLVGERGRE----VREFIE------DYLGDNLKKSVVVVATSDESPILRK 232 R+ V VGER RE RE +E D G + ++V+V +E P R Sbjct: 200 RAHKGFSVFAG-VGERTREGNDLYREMVESGVISRDEPGKS--QAVLVYGQMNEPPGARM 256 Query: 233 MAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 LTA+T+AEYF S+G +VL +D++ RF S E++ G +P A GY ++ +E+ Sbjct: 257 RVALTALTMAEYFRDSEGQDVLFFVDNVFRFTQSGSEVSALLGRIPSAVGYQPTLSAEMG 316 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 + ERI + G+IT+V ++ V D+ DP + + LD VL+R ++E G YP V Sbjct: 317 AMQERI--TSTNTGSITSVQAIYVPADDLTDPAPATSFAHLDSTTVLSRQISELGIYPAV 374 Query: 352 DPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 DPL S S+ L+ + ++ ++ + ++ + +DI I G Sbjct: 375 DPLESTSQALSPEVVGSEHYEVAQEVKRILQTHKSLQDIIAILG 418 >gi|226326989|ref|ZP_03802507.1| hypothetical protein PROPEN_00849 [Proteus penneri ATCC 35198] gi|225204826|gb|EEG87180.1| hypothetical protein PROPEN_00849 [Proteus penneri ATCC 35198] Length = 460 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 107/336 (31%), Positives = 169/336 (50%), Gaps = 17/336 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 IV +G + +S G V G + GR++N LG PID KGD++ E Sbjct: 51 IVRCIAMGTSDGLSRGLKVEDLGHPIEVPVGKATLGRIMNVLGTPIDM-----KGDIATE 105 Query: 128 ----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 I + P ++ +TGI+V+D+ P G ++G+F G+G+GK+ + R Sbjct: 106 ERWSIHREAPTYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 165 Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239 + + + + VGER RE +F + N L K +V +E P R LT + Sbjct: 166 NIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGL 225 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 T+AE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI Sbjct: 226 TMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 283 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + + G+IT+V +V V D+ DP + + LD +VL+R +A G YP VDPL S SR Sbjct: 284 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 343 Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 D E V+ + ++ R++E +DI I G Sbjct: 344 QLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|15966787|ref|NP_387140.1| F0F1 ATP synthase subunit beta [Sinorhizobium meliloti 1021] gi|307301615|ref|ZP_07581374.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti BL225C] gi|307316361|ref|ZP_07595805.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti AK83] gi|81633814|sp|Q92LK8|ATPB_RHIME RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|15076059|emb|CAC47613.1| Probable ATP synthase beta chain [Sinorhizobium meliloti 1021] gi|306898201|gb|EFN28943.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti AK83] gi|306903313|gb|EFN33902.1| ATP synthase F1, beta subunit [Sinorhizobium meliloti BL225C] Length = 504 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D L K I + P +++ + TGI+V+D+ P G Sbjct: 117 LGRIMNVIGEPVDEAGPL-KTSARRAIHQEAPAYVDQSTEAQILVTGIKVVDLLAPYAKG 175 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 176 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 234 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +T+AE F +G +VL +D+I RF + E+ Sbjct: 235 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEQFRDEGQDVLFFVDNIFRFTQAGSEV 294 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + KG+IT+V ++ V D+ DP + Sbjct: 295 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 352 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E VS + + R++ +D Sbjct: 353 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVSRKVQSTLQRYKALQD 412 Query: 389 IRLIGG 394 I I G Sbjct: 413 IIAILG 418 >gi|127514770|ref|YP_001095967.1| F0F1 ATP synthase subunit beta [Shewanella loihica PV-4] gi|190358704|sp|A3QJR0|ATPB_SHELP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|126640065|gb|ABO25708.1| ATP synthase F1, beta subunit [Shewanella loihica PV-4] Length = 458 Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 161/302 (53%), Gaps = 10/302 (3%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 + GR++N LG+P+D +G+ D I + P ++ + +TGI+VID+ P Sbjct: 80 SATLGRIMNVLGQPVDEAGPIGE-DERYVIHREAPSYEDQSNTTELLETGIKVIDLVCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMEESGV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALL 257 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 258 GRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 315 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 +VL+R++A G YP VDPL S SR D E + S + +++ R++E +DI I Sbjct: 316 ATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVASGVQNVLQRYKELKDIIAI 375 Query: 393 GG 394 G Sbjct: 376 LG 377 >gi|167573813|ref|ZP_02366687.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis C6786] Length = 356 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 93/270 (34%), Positives = 145/270 (53%), Gaps = 12/270 (4%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFA 182 I PP ++ F TGI+VID+ PL G + +F G+G+GK+ L+ +M Sbjct: 3 IHRGAPPLSEQKSSTALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVE 62 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241 R + + +GER RE E + D G L ++V+V +E P R PLTA+ I Sbjct: 63 RYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAI 120 Query: 242 AEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 AEYF + NVLL++D++ RF + E++ G LP GY ++ SE+ L ERI + Sbjct: 121 AEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--A 178 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 E +TA+ +V V D+ DP ++ + +D +VL+R++A EG YP +DP+AS S L Sbjct: 179 SVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSIL 238 Query: 361 ADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 D DE V+ + +I + E +D+ Sbjct: 239 LDPLVVGDEHVEVAIEVRRVIEHYRELQDV 268 >gi|261341611|ref|ZP_05969469.1| hypothetical protein ENTCAN_08074 [Enterobacter cancerogenus ATCC 35316] gi|288315963|gb|EFC54901.1| ATP synthase F1, beta subunit [Enterobacter cancerogenus ATCC 35316] Length = 460 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|325568952|ref|ZP_08145245.1| ATP synthase F1 sector beta subunit [Enterococcus casseliflavus ATCC 12755] gi|325157990|gb|EGC70146.1| ATP synthase F1 sector beta subunit [Enterococcus casseliflavus ATCC 12755] Length = 468 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFPEEAPRSGIHKKAPDFDELSTSTEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYNEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S LA + ++ + + H + R+ E +DI I G Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEKHYEVATEVQHALQRYRELQDIIAILG 385 >gi|168333944|ref|ZP_02692176.1| ATP synthase F1, beta subunit [Epulopiscium sp. 'N.t. morphotype B'] Length = 468 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 155/299 (51%), Gaps = 12/299 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR+ N G P+D + D + + P+ Q +TGI+V+D+ P G Sbjct: 94 GRIFNVTGDPVDNKPA---PDAEHWPIHRAAPSFEEQSTTAEILETGIKVVDLLCPYLKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ R+ + + + VGER RE + + + K+ Sbjct: 151 GKIGLFGGAGVGKTVLIQELIRNIATEHGGFSVFAGVGERTREGNDLFHEMTDSGVINKT 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ G + Sbjct: 211 TMVFGQMNEPPGARMRVALTGLTMAEYFRDESGQDVLLFVDNIFRFIQAGSEVSALLGRI 270 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + LD Sbjct: 271 PSAVGYQPTLATEVGTLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDAKT 328 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+ E+G YP VDPL S SR+ D + D + + + R++E +DI I G Sbjct: 329 VLSRSIVEQGIYPAVDPLDSTSRILDPQIVGQDHYDVSRQVQATLQRYKELQDIIAILG 387 >gi|259910316|ref|YP_002650672.1| F0F1 ATP synthase subunit beta [Erwinia pyrifoliae Ep1/96] gi|292490160|ref|YP_003533055.1| membrane-bound ATP synthase, F1 sector subunit beta [Erwinia amylovora CFBP1430] gi|292901162|ref|YP_003540531.1| ATP synthase subunit beta [Erwinia amylovora ATCC 49946] gi|224965938|emb|CAX57471.1| ATP synthase, F1 complex, beta subunit [Erwinia pyrifoliae Ep1/96] gi|283480439|emb|CAY76355.1| membrane-bound ATP synthase, F1 sector,beta-subunit [Erwinia pyrifoliae DSM 12163] gi|291201010|emb|CBJ48149.1| ATP synthase beta subunit [Erwinia amylovora ATCC 49946] gi|291555602|emb|CBA24220.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Erwinia amylovora CFBP1430] gi|312174353|emb|CBX82606.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Erwinia amylovora ATCC BAA-2158] Length = 460 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ + +TGI+VID+ Sbjct: 83 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGFSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|39933253|ref|NP_945529.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris CGA009] gi|192288604|ref|YP_001989209.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris TIE-1] gi|81829803|sp|Q6NDD2|ATPB_RHOPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|39652878|emb|CAE25620.1| putative H+-transporting ATP synthase beta chain [Rhodopseudomonas palustris CGA009] gi|192282353|gb|ACE98733.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris TIE-1] Length = 476 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 17/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR++N +G+P+D + K + I + P ++ + TGI+V+D+ P Sbjct: 86 AGTLGRIMNVIGEPVDEQGPI-KSEGLRAIHQEAPAYTDQSTEAEILVTGIKVVDLLAPY 144 Query: 159 CHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ AR+ V VGER RE EFIE + Sbjct: 145 AKGGKIGLFGGAGVGKTVLIQELINNVARAHGGYSVFAG-VGERTREGNDLYHEFIESGV 203 Query: 211 ----GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 G K +V +E P R LT +T+AE+F +G +VL +D+I RF + Sbjct: 204 NKKGGGEGSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQAG 263 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 264 SEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPA 321 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEE 385 + + LD VLNR+++E+G YP VDPL S SR+ + +E + + ++ +++ Sbjct: 322 TSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRMLSASIVGEEHYNTARMVQQILQKYKS 381 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 382 LQDIIAILG 390 >gi|28572498|ref|NP_789278.1| F0F1 ATP synthase subunit beta [Tropheryma whipplei TW08/27] gi|81629884|sp|Q83HY0|ATPB_TROW8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573776|sp|Q83G91|ATPB_TROWT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|29422126|gb|AAO84483.1|AF483648_2 ATP synthase F1 complex beta chain [Tropheryma whipplei] gi|28410630|emb|CAD67016.1| ATP synthase beta chain [Tropheryma whipplei TW08/27] Length = 474 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N +G+ ++ + K D I K P + + F+TGI+VID+ TP G Sbjct: 93 GRVFNVVGEVLNSNGEDIKFDEYWSIHRKPPEFSLLESKTQLFETGIKVIDLLTPYVQGG 152 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ + D +S+ VGER RE + I + K+ Sbjct: 153 KIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIREMQDAGVFDKTA 212 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 213 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRIP 272 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 273 SAVGYQPNLADEMGVLQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAHLDATTE 330 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP VDPLAS SR+ D + D ++ ++ ++ R +E R+I I G Sbjct: 331 LSREIASKGLYPAVDPLASTSRILDPKYIGKDHYRVAVTVKQILQRDKELREIIAILG 388 >gi|42520100|ref|NP_966015.1| F0F1 ATP synthase subunit beta [Wolbachia endosymbiont of Drosophila melanogaster] gi|81700105|sp|Q73IG3|ATPB_WOLPM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|42409837|gb|AAS13949.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] Length = 475 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 107/337 (31%), Positives = 175/337 (51%), Gaps = 28/337 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GR+ N +G+ ID L KG ++E + + PP+ QR+ E+ TGI+VID+ P Sbjct: 86 LGRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLK 144 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 145 GGKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVI 202 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 203 NINEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAG 262 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP Sbjct: 263 SEISALLGRIPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPA 320 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + S LD VL+R +AE G YP VDPL S S+ L+ + + + S + ++ ++ Sbjct: 321 TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKS 380 Query: 386 TRDIRLIGGYRPGVD---LILDKAVHQVPIIYDFLKQ 419 +DI I G D +I+D+A I FL Q Sbjct: 381 LQDIIAILGMDELSDEDKIIVDRARK----IQKFLSQ 413 >gi|167829375|ref|ZP_02460846.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 9] Length = 421 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 157/297 (52%), Gaps = 16/297 (5%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+++ G P GDD D+ + + P + Q+ F TGI+VID+ PL Sbjct: 7 GRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATGIKVIDLLAPLAQ 64 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G + +F G+G+GK+ L+ +M R + + +GER RE E + D G L Sbjct: 65 GGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVL 122 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 ++V+V +E P R PLTA+ IAEYF + NVLL++D++ RF + E++ Sbjct: 123 GRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLL 182 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G LP GY ++ SE+ L ERI + E +TA+ +V V D+ DP ++ + +D Sbjct: 183 GRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVD 240 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 +VL+R++A EG YP +DP+AS S L D + V+ + +I + E +D+ Sbjct: 241 SMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 297 >gi|331695534|ref|YP_004331773.1| ATP synthase subunit beta [Pseudonocardia dioxanivorans CB1190] gi|326950223|gb|AEA23920.1| ATP synthase subunit beta [Pseudonocardia dioxanivorans CB1190] Length = 475 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 160/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG+ +D D G+L I K P + + +TGI+VID+ TP G Sbjct: 98 GHVFNALGECLDKPDLEITGEL-WGIHRKAPSFDQLEGRTEMLETGIKVIDLLTPYVQGG 156 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + I + + + Sbjct: 157 KIGLFGGAGVGKTVLIQEMITRVAKNFGGTSVFAGVGERTREGNDLITEMTESGVIADTA 216 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 217 LVFGQMDEPPGTRMRVALSALTMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 276 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 277 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 334 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++++G YP VDPL S SR+ D + DE ++ + + ++ R+ + +DI I G Sbjct: 335 LSRPISQKGIYPAVDPLTSTSRILDPQYIGDEHFRVANEVKRILQRYSDLQDIIAILG 392 >gi|312794895|ref|YP_004027817.1| ATP synthase beta chain [Burkholderia rhizoxinica HKI 454] gi|312166670|emb|CBW73673.1| ATP synthase beta chain (EC 3.6.3.14) [Burkholderia rhizoxinica HKI 454] Length = 463 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPISHEN-TRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGRDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E ++ S+ + RF+E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRSVQQTLQRFKELRDIIAILG 382 >gi|257873785|ref|ZP_05653438.1| ATP synthase F1 [Enterococcus casseliflavus EC10] gi|257877535|ref|ZP_05657188.1| ATP synthase F1 [Enterococcus casseliflavus EC20] gi|257807949|gb|EEV36771.1| ATP synthase F1 [Enterococcus casseliflavus EC10] gi|257811701|gb|EEV40521.1| ATP synthase F1 [Enterococcus casseliflavus EC20] Length = 468 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFPEEAPRSGIHKKAPDFDELSTSTEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYNEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTLAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S LA + ++ + + H + R+ E +DI I G Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEKHYEVATEVQHALQRYRELQDIIAILG 385 >gi|296105474|ref|YP_003615620.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295059933|gb|ADF64671.1| F0F1 ATP synthase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 460 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|329296425|ref|ZP_08253761.1| F0F1 ATP synthase subunit beta [Plautia stali symbiont] Length = 465 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 158/309 (51%), Gaps = 21/309 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME---------IMSKVPPAMNRQRVEKGFKTGIR 150 GR++N LG+PID KGDL E I P ++ ++ +TGI+ Sbjct: 83 ATLGRIMNVLGEPIDM-----KGDLKEEDGSAVEVSSIHRAAPSYEDQSNSQELLETGIK 137 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207 VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE +F Sbjct: 138 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 197 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + Sbjct: 198 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 257 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP Sbjct: 258 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 315 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + + LD + L+R +A G YP VDPL S SR D E V+ + L+ R++E Sbjct: 316 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSLLQRYQE 375 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 376 LKDIIAILG 384 >gi|258690476|gb|ACV88000.1| ATP synthase beta subunit [Tethya actinia] Length = 395 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 161/307 (52%), Gaps = 21/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID +G ++ I + P + ++ TGI+V+D+ P G Sbjct: 64 GRIINVIGEPIDERGPMGT-NMEASIHADAPEFVEMNVKQEILVTGIKVVDLLAPYAKGG 122 Query: 163 RIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREVREFIEDY------- 209 +IG+F G+G+GK+ ++ A C + + VGER RE + + Sbjct: 123 KIGLFGGAGVGKTVVIMELINNVAKAHGGCS---VFAGVGERTREGNDLYHEMIQSGVIS 179 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 180 LKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSE 239 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 240 VSALLGRIPSAVGYQPTLATDMGTMQERI--TTTQKGSITSVQAVFVPADDLTDPAPATT 297 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD VL+R+++E G YP VDPL S SR+ D +E V+ + ++ ++ + Sbjct: 298 FAHLDATTVLSRAISELGIYPAVDPLDSTSRIMDPNIVGEEHYNVARGVQKILQDYKSLQ 357 Query: 388 DIRLIGG 394 DI I G Sbjct: 358 DIIAILG 364 >gi|316931855|ref|YP_004106837.1| ATP synthase F1 subunit beta [Rhodopseudomonas palustris DX-1] gi|315599569|gb|ADU42104.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris DX-1] Length = 476 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 160/305 (52%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + K + I + P ++ + TGI+V+D+ P G Sbjct: 90 GRIMNVIGEPVDEQGPI-KSEGLRAIHQEAPAYTDQSTEAEILVTGIKVVDLLAPYAKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIEDYL---- 210 +IG+F G+G+GK+ L+ AR+ V VGER RE EFIE + Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVARAHGGYSVFAG-VGERTREGNDLYHEFIESGVNKKG 207 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 G K +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ Sbjct: 208 GGEGSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVS 267 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + + Sbjct: 268 ALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSFA 325 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDI 389 LD VLNR+++E+G YP VDPL S SR+ + +E + + ++ +++ +DI Sbjct: 326 HLDATTVLNRAISEKGIYPAVDPLDSTSRMLSASIVGEEHYTTARMVQQILQKYKSLQDI 385 Query: 390 RLIGG 394 I G Sbjct: 386 IAILG 390 >gi|34500022|gb|AAQ73593.1| ATP synthase beta subunit [Lonepinella koalarum] Length = 426 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 159/298 (53%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + + I + P ++ + +TGI+VID+ P G Sbjct: 76 LGRIMNVLGEPIDEKGEIG-AEENWAIHRQAPSYEDQSNSTELLETGIKVIDLICPFAKG 134 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 135 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 194 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 195 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 254 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 255 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 312 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + ++ R++E +DI I G Sbjct: 313 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGILQRYKELKDIIAILG 370 >gi|28493391|ref|NP_787552.1| F0F1 ATP synthase subunit beta [Tropheryma whipplei str. Twist] gi|28476432|gb|AAO44521.1| ATP synthase beta chain [Tropheryma whipplei str. Twist] Length = 477 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N +G+ ++ + K D I K P + + F+TGI+VID+ TP G Sbjct: 96 GRVFNVVGEVLNSNGEDIKFDEYWSIHRKPPEFSLLESKTQLFETGIKVIDLLTPYVQGG 155 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ + D +S+ VGER RE + I + K+ Sbjct: 156 KIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIREMQDAGVFDKTA 215 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 216 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRIP 275 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 276 SAVGYQPNLADEMGVLQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAHLDATTE 333 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP VDPLAS SR+ D + D ++ ++ ++ R +E R+I I G Sbjct: 334 LSREIASKGLYPAVDPLASTSRILDPKYIGKDHYRVAVTVKQILQRDKELREIIAILG 391 >gi|112791404|gb|ABI21972.1| ATP synthase beta subunit [Erwinia amylovora] Length = 421 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ + +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRSAPSYEDQSNSQDLLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEPSGFSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|121534927|ref|ZP_01666746.1| ATP synthase F1, beta subunit [Thermosinus carboxydivorans Nor1] gi|121306526|gb|EAX47449.1| ATP synthase F1, beta subunit [Thermosinus carboxydivorans Nor1] Length = 469 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ +D DD + I P ++ +TGI+V+D+ P G Sbjct: 89 LGRVFNVLGETVDNDDREVIAEDYWPIHRPAPSFEEQETSTTILETGIKVVDLIAPYAKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ R+ + + + VGER RE + ++E + K+ Sbjct: 149 GKIGLFGGAGVGKTVLIMELIRNIATEHGGFSVFAGVGERTREGNDLWMEMRESGVIDKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF G +VLL +D+I RF + E++ G + Sbjct: 209 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVHGQDVLLFIDNIFRFIQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 269 PSAVGYQPTLGTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D E ++ + ++ R++E +DI I G Sbjct: 327 VLSRQIAELGIYPAVDPLDSTSRILDPNIIGQEHYEVARGVQEVLQRYKELQDIIAILG 385 >gi|295095359|emb|CBK84449.1| ATP synthase F1 subcomplex beta subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 460 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|126665446|ref|ZP_01736428.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17] gi|126630074|gb|EBA00690.1| F0F1 ATP synthase subunit beta [Marinobacter sp. ELB17] Length = 479 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 100/295 (33%), Positives = 161/295 (54%), Gaps = 13/295 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N G+PID + D+ I + PPA+ + V +TGI+ ID+ +P+ G Sbjct: 107 GRMLNVFGEPIDNKPAPAT-DIRRSI-HQPPPALEDRVVHSDILETGIKAIDLLSPIERG 164 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LKK 216 + G+F G+G+GK+ L++ + + +SL +GER RE E + +GD K Sbjct: 165 GKTGLFGGAGVGKTVLITELINNTVQEYEGVSLFCGIGERSREAEELYRE-MGDAGVRDK 223 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +E+P +R + TA+T+AEYF K +VLL++D+I RF + E++ G Sbjct: 224 TVMVFGQMNEAPGVRFLVGKTALTMAEYFRDDKKQDVLLLIDNIFRFVQAGSEVSGLMGR 283 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P GY ++ +EL L ERI + G+IT++ +V V D+ DP A + S L Sbjct: 284 MPSRVGYQPTLATELATLEERI--TSTRNGSITSIQAVYVPADDFTDPAAAHIFSHLSAS 341 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 +VL+R A EG YP VDPLAS S + A + ++ + +E+ RDI Sbjct: 342 VVLSRKRASEGLYPAVDPLASASVMLTPAVVGQRHYDIARAVRRTLADYEDLRDI 396 >gi|307195440|gb|EFN77326.1| ATP synthase subunit beta, mitochondrial [Harpegnathos saltator] Length = 518 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 102/292 (34%), Positives = 155/292 (53%), Gaps = 17/292 (5%) Query: 84 GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G VF G RI A GR+IN +G+PID + L+ I + P ++ + Sbjct: 115 GQNVFDSGYPIRIPVGAETLGRIINVIGEPIDERGPIATDKLAA-IHADAPEFVDMSVEQ 173 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGER 198 + TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER Sbjct: 174 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGER 232 Query: 199 GRE----VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGD 250 RE E IE L D K +V +E P R LT +T+AEYF +G Sbjct: 233 TREGNDLYHEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQ 292 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VLL +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V Sbjct: 293 DVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSV 350 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 ++ V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D Sbjct: 351 QAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 402 >gi|296327996|ref|ZP_06870531.1| ATP synthase F1 sector beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154952|gb|EFG95734.1| ATP synthase F1 sector beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 462 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D L + + I + P + + + F+TGI+VID+ P Sbjct: 82 AVLGRILNVLGEPVDNQGPL-NAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE R+ + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVIT 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ G Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+R++A G YP VDPL S S+ L++ + ++ + ++ R++E +DI I Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARKVQEVLQRYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|299821861|ref|ZP_07053749.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Listeria grayi DSM 20601] gi|299817526|gb|EFI84762.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Listeria grayi DSM 20601] Length = 473 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG+ ID D+ + D+ + + P + + +TGI+V+D+ P Sbjct: 92 LGRVFNVLGETIDLDEPIA-ADIQRNKIHRPAPTFDELATKTEILETGIKVVDLLAPYVK 150 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K Sbjct: 151 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEK 210 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G Sbjct: 211 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEHQDVLLFIDNIFRFTQAGSEVSALLGR 270 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 271 MPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDAT 328 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS SR L+ + + + + + L+ R+ E +DI I G Sbjct: 329 TNLERKLTEQGIYPAVDPLASTSRALSPEIVGEEHYNIATGVQRLLQRYRELQDIIAILG 388 >gi|291286803|ref|YP_003503619.1| ATP synthase F1, beta subunit [Denitrovibrio acetiphilus DSM 12809] gi|290883963|gb|ADD67663.1| ATP synthase F1, beta subunit [Denitrovibrio acetiphilus DSM 12809] Length = 467 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN G P+D L + + I P ++ + +TGI+VID+ P G Sbjct: 87 LGRIINVTGDPVDEAGPL-ETETRWPIHRPAPTLEDQDTGTEILETGIKVIDLLEPYTKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ + + + + VGER RE ++ +E+ + K Sbjct: 146 GKTGLFGGAGVGKTVLIMELINNIAQEHGGYSVFAGVGERTREGKDLLEEMEESGVISKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF+ + E++ G + Sbjct: 206 ALVYGQMNEPPGARMRVALTGLTVAEYFRDEEGQDVLLFVDNIFRFSQAGSEVSALLGRM 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + +D Sbjct: 266 PSAVGYQPTLGTEMGELQERI--TSTSKGSITSVQAVYVPADDLTDPAPATTFAHIDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D +E V+ + ++ +++E +DI I G Sbjct: 324 VLSRQIAELGIYPAVDPLDSTSRILDPGVVGEEHYAVARGVQAVLQKYKELQDIIAILG 382 >gi|34500008|gb|AAQ73586.1| ATP synthase beta subunit [Actinobacillus succinogenes] Length = 439 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 8/292 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G + + I + P ++ + +TGI+VID+ P G Sbjct: 78 GRIMNVLGEPIDQKGEIG-AEETWAIHREAPSYEDQSNSTELLETGIKVIDLICPFAKGG 136 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N L K Sbjct: 137 KVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTESNVLDKVS 196 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 197 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 256 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 257 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 314 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 +R++A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 315 SRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDI 366 >gi|323352614|ref|ZP_08087584.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis VMC66] gi|322121650|gb|EFX93396.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis VMC66] gi|325690056|gb|EGD32060.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK115] gi|325693989|gb|EGD35907.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK150] gi|325696691|gb|EGD38579.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK160] gi|327458645|gb|EGF04993.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK1057] gi|327468900|gb|EGF14372.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK330] gi|332361632|gb|EGJ39436.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK1056] gi|332362656|gb|EGJ40454.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK49] gi|332363078|gb|EGJ40865.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK355] gi|332365946|gb|EGJ43702.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK1059] Length = 468 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFAEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|146329438|ref|YP_001210026.1| F0F1 ATP synthase subunit beta [Dichelobacter nodosus VCS1703A] gi|166201700|sp|A5EXL4|ATPB_DICNV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|146232908|gb|ABQ13886.1| ATP synthase F1, beta subunit [Dichelobacter nodosus VCS1703A] Length = 463 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D ++ D I P + +TGI+VID+ P Sbjct: 81 ATLGRIMNVLGEPVDHGGAINAED-KWSIHRAAPAYDELSNSTELLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFI-EDYLGDNLK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F E D L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYYEMKESDVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E R LT +T+AEYF +G +VL +D+I R+ + E++ G Sbjct: 200 KVSLVYGQMNEPAGNRFRVALTGLTMAEYFREEGRDVLFFVDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ +L ERI + +KG+IT++ +V V D+ DP + + LD Sbjct: 260 MPSAVGYQPTLAEEMGKLQERIAST--KKGSITSIQAVYVPADDLTDPSPATTFAHLDST 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +AE G YP VDPL S SR D +E + ++ R++E RDI I G Sbjct: 318 VVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGEEHYSTARRVQGVLQRYKELRDIIAILG 377 >gi|225376567|ref|ZP_03753788.1| hypothetical protein ROSEINA2194_02209 [Roseburia inulinivorans DSM 16841] gi|225211604|gb|EEG93958.1| hypothetical protein ROSEINA2194_02209 [Roseburia inulinivorans DSM 16841] Length = 467 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 162/308 (52%), Gaps = 11/308 (3%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVI 152 ++ A GR+ N LG +DG ++L + ++ + PP+ Q V + +TGI+VI Sbjct: 77 KVPVGAKTLGRLFNVLGDTLDGGENLDAEE--HWVIHRDPPSFEDQSPVVEILETGIKVI 134 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ R+ + I + VGER RE + + Sbjct: 135 DLLAPYAKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWSEM 194 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 L+K+ +V +E P R T +T+AEYF + NVLL +D+I RF + Sbjct: 195 KESGVLEKTALVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFTQAGS 254 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + Sbjct: 255 EVSALLGRMPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPAT 312 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R + E+G YP VDPL S SR L + + + + ++ ++ E Sbjct: 313 TFAHLDATTVLSRKIVEQGIYPAVDPLESNSRILEEDVVGKEHYETARKVQEILQKYTEL 372 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 373 QDIIAILG 380 >gi|192359136|ref|YP_001984260.1| F0F1 ATP synthase subunit beta [Cellvibrio japonicus Ueda107] gi|226740176|sp|B3PIS7|ATPB_CELJU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190685301|gb|ACE82979.1| ATP synthase F1, beta subunit [Cellvibrio japonicus Ueda107] Length = 459 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 160/299 (53%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + M+I P E+ +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDEAGPIGEQE-RMQIHRAAPAYEELAASEELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-KK 216 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N+ K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYHEMKDSNVVDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G + Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRM 260 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD + Sbjct: 261 PSAVGYQPTLAEEMGVLQERI--TSTKIGSITSVQAVYVPADDLTDPSPATTFAHLDSTV 318 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +A +G YP +DPL S SR D +E LV+ + ++ R++E +DI I G Sbjct: 319 VLSRDIAAKGIYPAIDPLDSTSRQLDPMVIGNEHYLVARGVQSVLQRYKELKDIIAILG 377 >gi|18146851|dbj|BAB82484.1| F0F1-ATPase subunit beta [Colwellia maris] Length = 461 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ D I + P + + +TGI+VID+ P G Sbjct: 86 LGRIMNVLGEPIDEAGPIGEKD-RWSIHREAPAYAEQSMSNELLETGIKVIDLVCPFAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 205 SLVYGQMNEPPGNRLRVAFTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + KG+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGILQERI--TSTNKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP +DPL S SR D A+ + + ++ R++E +DI I G Sbjct: 323 LSRDIASQGIYPAIDPLDSSSRQLDPLVVGAEHYETARGVQTVLQRYKELKDIIAILG 380 >gi|152978010|ref|YP_001343639.1| F0F1 ATP synthase subunit beta [Actinobacillus succinogenes 130Z] gi|171472936|sp|A6VL57|ATPB_ACTSZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|150839733|gb|ABR73704.1| ATP synthase F1, beta subunit [Actinobacillus succinogenes 130Z] Length = 458 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 96/292 (32%), Positives = 156/292 (53%), Gaps = 8/292 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G + + I + P ++ + +TGI+VID+ P G Sbjct: 84 GRIMNVLGEPIDQKGEIG-AEETWAIHREAPSYEDQSNSTELLETGIKVIDLICPFAKGG 142 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTESNVLDKVS 202 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 203 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 262 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 263 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 320 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 +R++A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 321 SRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDI 372 >gi|158321580|ref|YP_001514087.1| F0F1 ATP synthase subunit beta [Alkaliphilus oremlandii OhILAs] gi|172048246|sp|A8MJV9|ATPB_ALKOO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|158141779|gb|ABW20091.1| ATP synthase F1, beta subunit [Alkaliphilus oremlandii OhILAs] Length = 464 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 159/301 (52%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N +G+P+D ++ + I P ++ + +TGI+V+D+ P Sbjct: 86 ATLGRIFNVIGEPVDEKGAVA-AEAKAPIHRPAPSFEDQATSTEILETGIKVVDLIAPYL 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + + S VGER RE + + + + Sbjct: 145 KGGKIGLFGGAGVGKTVLIMELINNIAKEHGGLSVFSGVGERTREGNDLYNEMIESGVID 204 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AE+F +G +VLL +D+I RF + E++ G Sbjct: 205 KTALVYGQMNEPPGARMRVGLTGLTMAEHFRDEEGQDVLLFIDNIFRFTQAGSEVSALLG 264 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + LD Sbjct: 265 RMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFAHLDA 322 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+R + E G YP VDPL S SR+ D A DE V+ + ++ R++E +DI I Sbjct: 323 TTVLSRQIVELGIYPAVDPLDSNSRVLDPAIVGDEHYSVARGVQEVLQRYKELQDIIAIL 382 Query: 394 G 394 G Sbjct: 383 G 383 >gi|19703700|ref|NP_603262.1| F0F1 ATP synthase subunit beta [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|81848278|sp|Q8RGE2|ATPB_FUSNN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|19713824|gb|AAL94561.1| ATP synthase beta chain, sodium ion specific [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 462 Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D L + + I + P + + + F+TGI+VID+ P Sbjct: 82 AVLGRILNVLGEPVDNQGPL-NAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE R+ + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVIT 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ G Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+R++A G YP VDPL S S+ L++ + ++ + ++ R++E +DI I Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARKVQEVLQRYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|226371|prf||1508208B ATPase beta Length = 460 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 101/302 (33%), Positives = 155/302 (51%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR++N LG+PID KGD+ E I P ++ +TGI+VID+ P Sbjct: 85 LGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLMCP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N Sbjct: 140 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNV 199 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 200 LDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALL 259 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 260 GRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 317 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 +VL+R +A G YP VDPL S SR D E + L+ R++E +DI I Sbjct: 318 ATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDIIAI 377 Query: 393 GG 394 G Sbjct: 378 LG 379 >gi|115350153|ref|YP_771992.1| F0F1 ATP synthase subunit beta [Burkholderia ambifaria AMMD] gi|122324407|sp|Q0BJL5|ATPB_BURCM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|115280141|gb|ABI85658.1| ATP synthase F1 subcomplex beta subunit [Burkholderia ambifaria AMMD] Length = 464 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + +++ I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESEVTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382 >gi|258652337|ref|YP_003201493.1| ATP synthase F1 subunit beta [Nakamurella multipartita DSM 44233] gi|258555562|gb|ACV78504.1| ATP synthase F1, beta subunit [Nakamurella multipartita DSM 44233] Length = 472 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG+ +D + G G D + + PPA ++ + + TGI+VID+ TP Sbjct: 97 GHVFNALGRCLD---APGTGEDAEHWPIYRKPPAFDQLEGRTQQLVTGIKVIDLLTPYVQ 153 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + F E + Sbjct: 154 GGKIGLFGGAGVGKTVLIQEMITRVAKNFGGTSVFAGVGERTREGNDLFTEMTESGVIND 213 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G Sbjct: 214 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGR 273 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI ++ +IT++ ++ V D++ DP + + LD Sbjct: 274 MPSAVGYQPTLADEMGELQERITSTKGR--SITSLQAIYVPADDYTDPAPATTFAHLDAT 331 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++ E+G YP V+PL+S SR+ D + DE ++ + ++ +++E +DI I G Sbjct: 332 TELDRAITEKGIYPAVNPLSSTSRILDPQFVGDEHYRVAQEVIRILQKYKELQDIIAILG 391 >gi|328768905|gb|EGF78950.1| hypothetical protein BATDEDRAFT_20257 [Batrachochytrium dendrobatidis JAM81] Length = 507 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 101/327 (30%), Positives = 171/327 (52%), Gaps = 17/327 (5%) Query: 81 ISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 ++ G V G P C GR++N +G+P+D + L + I + P +++ Sbjct: 99 LTRGQKVLDTGAPICIPVGPECLGRIMNVIGEPVDERGPIKTKQL-LPIHASPPEFVDQS 157 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLV 195 V + +TGI+V+D+ P G +IG+F G+G+GK+ L++ A++ V V Sbjct: 158 TVPELLETGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLITELINNVAKAHGGYSVFCG-V 216 Query: 196 GERGREVREFIEDYLGDNL------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSK 248 GER RE + + + + K+ +V +E P R LT +TIAEYF + Sbjct: 217 GERTREGNDLYHEMITAGVIKLEGGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDQE 276 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 G +VLL +D+I RF + E++ G +P A GY ++ +++ ++ ERI + +KG+IT Sbjct: 277 GQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTKKGSIT 334 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 +V ++ V D+ DP + + LD VL+RS+AE G YP VDPL S SR+ D D Sbjct: 335 SVQAIYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSKSRILDPRIVGD 394 Query: 369 EK-KLVSSLTHLIHRFEETRDIRLIGG 394 + + + ++ ++ +DI I G Sbjct: 395 HHYGIATGVQKILQNYKSLQDIIAILG 421 >gi|302692110|ref|XP_003035734.1| hypothetical protein SCHCODRAFT_65406 [Schizophyllum commune H4-8] gi|300109430|gb|EFJ00832.1| hypothetical protein SCHCODRAFT_65406 [Schizophyllum commune H4-8] Length = 538 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 164/308 (53%), Gaps = 18/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + KGD + I + P +++ + +TGI+V+D+ P Sbjct: 149 ATLGRIMNVIGEPIDERGPI-KGDKLLPIHADPPAFVDQSTTAEVLETGIKVVDLLAPYA 207 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE----D 208 G +IG+F G+G+GK+ L+ + S+ VGER RE E IE + Sbjct: 208 RGGKIGLFGGAGVGKTVLIQELINNVAKAHGGFSIFCGVGERTREGNDLYHEMIETGVIN 267 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 268 LEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGS 325 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 326 EVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPAT 383 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R +AE G YP VDPL S SR+ D E + +++ ++ ++ Sbjct: 384 TFAHLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPRIVGQEHYAIATAVQKILQDYKSL 443 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 444 QDIIAILG 451 >gi|94501602|ref|ZP_01308119.1| ATP synthase F1, beta subunit [Oceanobacter sp. RED65] gi|94426285|gb|EAT11276.1| ATP synthase F1, beta subunit [Oceanobacter sp. RED65] Length = 458 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 159/298 (53%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + + I K P + ++ +TG++VID+ P G Sbjct: 83 LGRIMDVLGDPIDEKGPIGEQERA-SIHRKAPSYDEQAGGQELLETGVKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMSESNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +KG+IT+V +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP +DPL S SR D E + + ++ RF+E +DI I G Sbjct: 320 LSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARGVQTVLQRFKELKDIIAILG 377 >gi|326693459|ref|ZP_08230464.1| F0F1 ATP synthase subunit beta [Leuconostoc argentinum KCTC 3773] Length = 466 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 152/296 (51%), Gaps = 8/296 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+P+D + + I P + +TGI+VID+ P Sbjct: 85 ATLGRVFNVLGEPVDNNGPVAPDTPRHSIHRAAPKYDELASSTEILETGIKVIDLLAPYI 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + L Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMAESGVLS 204 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ +V +E P R LT +T+AE F ++G +VLL +D+I RF + E++ G Sbjct: 205 QTAMVYGQMNEPPGARMRVALTGLTMAESFRDNEGKDVLLFIDNIFRFTQAGSEVSALLG 264 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L RSL ++G YP VDPLAS S D E ++ + + + R+ E +DI Sbjct: 323 TTNLERSLTQQGIYPAVDPLASTSSALDPQVVGQEHYEVATEVQRTLQRYRELQDI 378 >gi|182435956|ref|YP_001823675.1| F0F1 ATP synthase subunit beta [Streptomyces griseus subsp. griseus NBRC 13350] gi|326776580|ref|ZP_08235845.1| ATP synthase subunit beta [Streptomyces cf. griseus XylebKG-1] gi|226740678|sp|B1W0A3|ATPB_STRGG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|178464472|dbj|BAG18992.1| putative ATP synthase beta chain [Streptomyces griseus subsp. griseus NBRC 13350] gi|326656913|gb|EGE41759.1| ATP synthase subunit beta [Streptomyces cf. griseus XylebKG-1] Length = 480 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 164/298 (55%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ ++ + I K P + + F+TG++V+D+ TP G Sbjct: 101 GKVFNTLGQILNEPEAEAQITERWPIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ M R + D V + + VGER RE + I++ L+K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIMRVAKLHDGVSVFAGVGERTREGNDLIDEMTESGVLEKTA 220 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 221 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 280 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 281 SAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++E+G YP VDPL S SR+ D + S D S + ++ ++++ +DI I G Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYAAASRVKGILQKYKDLQDIIAILG 396 >gi|148975564|ref|ZP_01812435.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3] gi|145964992|gb|EDK30243.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3] Length = 461 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 160/298 (53%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G+ + + EI + P + + +TG++VID+ P G Sbjct: 87 GRIMNVLGQPIDECGEIGQKE-NYEIHREAPSYEEKANSTELLETGVKVIDLICPFAKGG 145 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + ++G+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E + ++ + R++E +DI I G Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLIVGQEHYDIAQTVQTTLQRYKELKDIIAILG 380 >gi|146309620|ref|YP_001190085.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina ymp] gi|166990373|sp|A4Y187|ATPB_PSEMY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|145577821|gb|ABP87353.1| ATP synthase F1, beta subunit [Pseudomonas mendocina ymp] Length = 458 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ + EI P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPIDEAGPIGE-EEQWEIHRAAPSYAEQAGGNDLLETGIKVIDLVCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + + +++ R++E +DI I G Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYETARGVQYVLQRYKELKDIIAILG 377 >gi|284992516|ref|YP_003411070.1| ATP synthase F1 subunit beta [Geodermatophilus obscurus DSM 43160] gi|284065761|gb|ADB76699.1| ATP synthase F1, beta subunit [Geodermatophilus obscurus DSM 43160] Length = 478 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 101/303 (33%), Positives = 162/303 (53%), Gaps = 17/303 (5%) Query: 102 CGRVINALGKPID----GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 G V NALG+ +D G+D+L G I P + + +TGI+VID+ TP Sbjct: 99 TGHVWNALGQCLDTPGHGNDALRWG-----IHRHAPRFDQLEGRTEMLETGIKVIDLLTP 153 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ R + F V + + VGER RE + I + Sbjct: 154 YVAGGKIGLFGGAGVGKTVLIQEMIRRVAQEFGGVSVFAGVGERTREGNDLITEMTESGV 213 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 ++ + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 214 IESTALVFGQMDEPPGTRLRVALSALTMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSTL 273 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + L Sbjct: 274 LGRMPSAVGYQPTLADEMGELQERI--TSTRGHSITSLQAIYVPADDITDPAPHTTFAHL 331 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D VL+R ++E+G YP VDPL S SR+ D + E + ++ ++ R++E +DI Sbjct: 332 DATTVLSRPISEKGIYPAVDPLDSTSRILDPQYVGQEHYAIAQTVKQVLQRYQELQDIIA 391 Query: 392 IGG 394 I G Sbjct: 392 ILG 394 >gi|78189967|ref|YP_380305.1| F0F1 ATP synthase subunit beta [Chlorobium chlorochromatii CaD3] gi|118573520|sp|Q3AP13|ATPB_CHLCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|78172166|gb|ABB29262.1| ATP synthase F1 subcomplex beta subunit [Chlorobium chlorochromatii CaD3] Length = 462 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 163/304 (53%), Gaps = 13/304 (4%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR++N +G PIDG + + I P + + F+TGI+VID+ P Sbjct: 83 AEVLGRMLNVVGDPIDGRGPVNSKK-TYSIHRSAPKFEDISTKAEMFETGIKVIDLLEPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G + G+F G+G+GK+ L+ ++ + F + + VGER RE + + + Sbjct: 142 SRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFS--VFAGVGERTREGNDLWHEMMESG 199 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271 + K+ +V +E P R+ LT ++IAEYF + + +VLL +D+I RF + E++ Sbjct: 200 VIDKTALVFGQMNEPPGARQRVALTGLSIAEYFRDEENRDVLLFVDNIFRFTQAGSEVSA 259 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L +RI +KG++T+V ++ V D+ DP + + Sbjct: 260 LLGRMPSAVGYQPTLATEMGQLQDRI--VSTKKGSVTSVQAIYVPADDLTDPAPATAFTH 317 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD VL+RS+AE G YP VDPL S SR+ D D+ ++ L+ R+++ +DI Sbjct: 318 LDATTVLSRSIAELGIYPAVDPLDSTSRILDPNVVGDDHYNTAQAVKQLLQRYKDLQDII 377 Query: 391 LIGG 394 I G Sbjct: 378 AILG 381 >gi|293363728|ref|ZP_06610471.1| ATP synthase F1, beta subunit [Mycoplasma alligatoris A21JP2] gi|292552693|gb|EFF41460.1| ATP synthase F1, beta subunit [Mycoplasma alligatoris A21JP2] Length = 407 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160 GR+ + LG PID + + + +PP Q+ + +TGI+VID+ P Sbjct: 29 LGRMFDVLGNPIDLIPN--QNWTKTNPIHAMPPTYEEQKSTSEILETGIKVIDLLIPYSK 86 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + L K Sbjct: 87 GGKIGLFGGAGVGKTVLVQELINNIATEHNGLSVFAGVGERTREGNDLYHEMKAAGVLDK 146 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 147 TALVFGQMNEPPGARMRVALTGLTMAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGR 206 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +G+IT+V +V V D+ DP + + LD Sbjct: 207 MPSAVGYQPTLATEMGQLQERI--TSTRRGSITSVQAVYVPADDLTDPAPATTFTHLDAK 264 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 VL+R++A G YP +DPL+S SRL D +E V+ + +++ RF+E +DI I G Sbjct: 265 TVLDRNIAALGIYPAIDPLSSSSRLLDPLVVGNEHYSVAQGVLNILQRFKELQDIIAILG 324 >gi|229823983|ref|ZP_04450052.1| hypothetical protein GCWU000282_01287 [Catonella morbi ATCC 51271] gi|229786337|gb|EEP22451.1| hypothetical protein GCWU000282_01287 [Catonella morbi ATCC 51271] Length = 485 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 159/304 (52%), Gaps = 14/304 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF---KTGIRVIDIFT 156 GRV N LG+PID +G+ D E+ PA + + + +TGI+VID+ Sbjct: 97 VTLGRVFNVLGQPID---DMGRLDGDHEVRGIHRPAPTFEELSSSYTILETGIKVIDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + IS+ VGER RE + + + Sbjct: 154 PYIKGGKIGLFGGAGVGKTVLIQELIHNIAEQLGGISVFTGVGERTREGNDLVFEMRESG 213 Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIAT 271 + KK+ +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ Sbjct: 214 VNKKTAMVFGQMNEPPGARMRVVLTGLTMAEYFRDELKQDVLLFIDNIFRFTQAGSEVSA 273 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ SE+ + ERI + + G+IT++ +V V D++ DP + + Sbjct: 274 LLGRMPSAVGYQPTLASEMGAMQERI--TSTKNGSITSIQAVYVPADDYTDPAPATTFAH 331 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD L R L E+G YP VDPLAS S LA++ + + ++ R+ E +DI Sbjct: 332 LDATTNLERRLTEQGIYPAVDPLASTSSALAEEIVGQRHYNIALKVQKILQRYRELQDII 391 Query: 391 LIGG 394 I G Sbjct: 392 AILG 395 >gi|219670787|ref|YP_002461222.1| F0F1 ATP synthase subunit beta [Desulfitobacterium hafniense DCB-2] gi|254808146|sp|B8FZ34|ATPB_DESHD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|219541047|gb|ACL22786.1| ATP synthase F1, beta subunit [Desulfitobacterium hafniense DCB-2] Length = 465 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LGK ID + + D S I P +++ +TGI+VID+ P Sbjct: 85 ATLGRIFNVLGKAIDNGEEV-HTDTSYPIHRPAPAFVDQDPSTVMLETGIKVIDLLAPYS 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + + Sbjct: 144 KGGKIGLFGGAGVGKTVLIQELINNIAMEHGGLSVFAGVGERTREGNDLWNEMRESGVID 203 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 204 KMAMVFGQMNEPPGARLRVGLTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSALLG 263 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + G+IT+V ++ V D+ DP + + LD Sbjct: 264 RMPSAVGYQPTLATEMGALQERI--TSTRNGSITSVQAIYVPADDLTDPAPATAFAHLDA 321 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VLNR+++E+G YP VDPL S SR L+ + + K+ + ++ +++E +DI I Sbjct: 322 TTVLNRAISEKGIYPAVDPLDSNSRILSPQILGEEHYKVARDVQQILQKYKELQDIIAIL 381 Query: 394 G 394 G Sbjct: 382 G 382 >gi|302388308|ref|YP_003824130.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1] gi|302198936|gb|ADL06507.1| ATP synthase F1, beta subunit [Clostridium saccharolyticum WM1] Length = 464 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 21/300 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIF 155 GR+ N LG PID + E+ P P Q E + +TGI+V+D+ Sbjct: 89 LGRIFNVLGDPIDNKPA-------PEVKEHFPIHRPAPNFEEQSTETEVLETGIKVVDLL 141 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ R+ + + + VGER RE + + Sbjct: 142 CPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMQES 201 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIA 270 + K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 202 GVINKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDVLLFIDNIFRFTQAGSEVS 261 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 262 ALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPANTFA 319 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+RS+ E G YP VDPL S SR+ D +E ++ + ++ +++E +DI Sbjct: 320 HLDATTVLDRSIVELGIYPAVDPLGSTSRILDPRIVGEEHYRVARGVQEVLQKYKELQDI 379 >gi|182679688|ref|YP_001833834.1| F0F1 ATP synthase subunit beta [Beijerinckia indica subsp. indica ATCC 9039] gi|182635571|gb|ACB96345.1| ATP synthase F1, beta subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 483 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 99/294 (33%), Positives = 156/294 (53%), Gaps = 10/294 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+++ +G+ D L G + + + + PP + +Q F TGI+VID+ PL G Sbjct: 88 GRLLDVVGRIGDKGGDLPAG-VPLRPIHRAPPPLTQQTGTSSLFATGIKVIDLLAPLAQG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 + +F G+G+GK+ L+ + IS+ VGER RE E + D L ++ Sbjct: 147 GKAAMFGGAGVGKTVLVMELIHAMVASYQGISVFAGVGERSREGHEMLLDMAQSKVLDRT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276 V+V +E P R P+TA+TIAEYF + NVLL++D+I RF + E++ G L Sbjct: 207 VLVYGQMNEPPGARWRVPMTALTIAEYFRDECHRNVLLLMDNIFRFVQAGAEVSGLLGRL 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P GY ++ SE+ L ERI + +TA+ +V V D+ DP ++ S +D + Sbjct: 267 PSRVGYQPTLASEVAALQERI--ASVSGAAVTAIEAVYVPADDFTDPAVTTIASHVDSMV 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389 VL+R++A EG YP VDP+AS S L D D + + + I + E +D+ Sbjct: 325 VLSRAMAAEGMYPAVDPIASSSILLDPLIVGQDHVDVANEVRRTIEHYRELQDV 378 >gi|329117011|ref|ZP_08245728.1| ATP synthase F1, beta subunit [Streptococcus parauberis NCFD 2020] gi|326907416|gb|EGE54330.1| ATP synthase F1, beta subunit [Streptococcus parauberis NCFD 2020] Length = 468 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 159/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG ID ++ D E + K PA + +TGI+VID+ P Sbjct: 89 LGRVFNVLGDTIDLEEPFA-ADAKREPIHKQAPAFDELSTSSEILETGIKVIDLLAPYLK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + ++K Sbjct: 148 GGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYGEMKESGVIEK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDST 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + + + + ++ R+ E +DI I G Sbjct: 326 TNLERKLTQIGIYPAVDPLASSSRALSPEIVGKEHYDVATGVQRVLQRYRELQDIIAILG 385 >gi|46909247|gb|AAT06141.1| ATP synthase beta subunit [Lestes congener] Length = 342 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 163/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID + L+ I + P ++ ++ TGI+V+ Sbjct: 14 IRIPVGVETLGRIINVIGEPIDERGPVPTDKLA-SIHADAPEFVDMSVEQEILVTGIKVV 72 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 73 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 131 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 132 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 191 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 192 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 249 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D AD + + + Sbjct: 250 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNVIGADHYNVARGVQKI 309 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 310 LQDYKSLQDIIAILG 324 >gi|213406065|ref|XP_002173804.1| ATP synthase subunit beta [Schizosaccharomyces japonicus yFS275] gi|212001851|gb|EEB07511.1| ATP synthase subunit beta [Schizosaccharomyces japonicus yFS275] Length = 518 Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 163/305 (53%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + S I ++ P + + +TGI+V+D+ P G Sbjct: 131 LGRIMNVIGEPIDERGPIKAAKYS-PIHAEAPSFEEQSTSPEILETGIKVVDLLAPYARG 189 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL--G 211 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 190 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYREMQETGVIKL 248 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 D K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 249 DGESKAALVFGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSEVS 308 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 309 ALLGRIPSAVGYQPTLATDMGAMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 366 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+RS++E G YP VDPL S SR+ D +E L SS+ ++ ++ +DI Sbjct: 367 HLDATTVLSRSISEMGIYPAVDPLDSKSRMMDPRIVGEEHYNLASSVQRMLQEYKSLQDI 426 Query: 390 RLIGG 394 I G Sbjct: 427 IAILG 431 >gi|293375573|ref|ZP_06621847.1| ATP synthase F1, beta subunit [Turicibacter sanguinis PC909] gi|325836771|ref|ZP_08166238.1| ATP synthase F1, beta subunit [Turicibacter sp. HGF1] gi|292645790|gb|EFF63826.1| ATP synthase F1, beta subunit [Turicibacter sanguinis PC909] gi|325491149|gb|EGC93438.1| ATP synthase F1, beta subunit [Turicibacter sp. HGF1] Length = 467 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 102/330 (30%), Positives = 167/330 (50%), Gaps = 15/330 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + G I + P + +TGI+V+D+ P Sbjct: 87 ATLGRIFNVLGQPVDNKGEVPAGTPHEGIHKEAPKFEELSTTVEILETGIKVVDLLAPYI 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTESGVIN 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 207 KTAMVFGQMNEPPGARLRVALTGLTMAEYFRDELKQDVLLFIDNIFRFTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + ++G+IT++ +V V D++ DP + + LD Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTKEGSITSIQAVYVPADDYTDPAPATTFAHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R +A G YP VDPLAS SR L+ + + + ++ R+ E +DI I Sbjct: 325 TTNLERRIAAMGIYPAVDPLASTSRALSPDIVGQEHYDVARRVQMMLQRYRELQDIIAI- 383 Query: 394 GYRPGVDLILD---KAVHQVPIIYDFLKQS 420 G+D + + K VH+ + FL QS Sbjct: 384 ---LGMDELSEEDKKVVHRARRVQLFLSQS 410 >gi|67906678|gb|AAY82766.1| predicted F0F1-type ATP synthase beta subunit [uncultured bacterium eBACred22E04] Length = 459 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 158/298 (53%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+P+D + K + +M I P + + +TGI+V+D+ P G Sbjct: 83 LGRIMNVLGEPVDNAGDI-KAEKTMPIHRAAPTFSEQASEVEILETGIKVVDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ +L R+ + S+ VGER RE +F + + K Sbjct: 142 SKVGLFGGAGVGKTVILMELIRNIAAEHSGFSVFAGVGERTREGNDFFHEMTDAKVIDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G + LL +D+I R+ + E++ G +P Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGSDTLLFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++AE G YP VDPL S SR D E ++ ++ +++E +DI I G Sbjct: 320 LSRNIAELGIYPAVDPLDSTSRQLDPLIIGQEHYDTTRAVQGVLQKYKELKDIIAILG 377 >gi|146286055|sp|A2RMI2|ATPB_LACLM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|6048355|gb|AAF02210.1| H+-ATPase cytoplasmic F1-part beta-subunit [Lactococcus lactis subsp. cremoris MG1363] gi|15963437|dbj|BAB69471.1| H+-ATPase beta subunit [Lactococcus lactis subsp. lactis] gi|300071522|gb|ADJ60922.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. cremoris NZ9000] Length = 469 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG IDG + I K P + TGI+V+D+ P G Sbjct: 90 LGRVFNVLGDVIDGGEDFPADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYLKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 150 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLGRM 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 270 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L + + ++ + ++ R++E +DI I G Sbjct: 328 NLERRLTQMGIYPAVDPLASSSRALTPEIVGEEHYEVAMEVQRVLQRYKELQDIIAILG 386 >gi|330505856|ref|YP_004382725.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina NK-01] gi|328920142|gb|AEB60973.1| F0F1 ATP synthase subunit beta [Pseudomonas mendocina NK-01] Length = 458 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ + EI P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPIDEAGPIGEEE-QWEIHRAAPSYAEQAGGNDLLETGIKVIDLVCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D + + + +++ R++E +DI I G Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGTEHYETARGVQYVLQRYKELKDIIAILG 377 >gi|325688349|gb|EGD30368.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK72] Length = 468 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFSEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|149375664|ref|ZP_01893433.1| ATP synthase F1, beta subunit [Marinobacter algicola DG893] gi|149360066|gb|EDM48521.1| ATP synthase F1, beta subunit [Marinobacter algicola DG893] Length = 464 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID +G+ + I K P ++ +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPIDEQGEIGEEE-RWAIHRKAPGYADQSASADLLETGIKVIDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYYEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G + Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRM 260 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + S LD + Sbjct: 261 PSAVGYQPTLAQEMGELQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATV 318 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +A +G YP +DPL S SR D DE ++ + + R++E +DI I G Sbjct: 319 VLSRDIASKGIYPAIDPLDSTSRQLDPLVIGDEHYEVARGVQTNLQRYKELKDIIAILG 377 >gi|292493904|ref|YP_003529343.1| ATP synthase F1 subunit beta [Nitrosococcus halophilus Nc4] gi|291582499|gb|ADE16956.1| ATP synthase F1, beta subunit [Nitrosococcus halophilus Nc4] Length = 458 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 104/332 (31%), Positives = 169/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + +S G V + G + A GR+++ LG P+D +G+ + Sbjct: 49 VVRTIAMGSSDGLSRGMAVTNTGSPISVPVGAKTLGRIMDVLGDPVDEAGPVGEEE-RWA 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I K P + +TGI+V+D+ P G ++G+F G+G+GK+ + R+ Sbjct: 108 IHRKAPTYEELSPATELLETGIKVVDLICPFAKGGKVGLFGGAGVGKTVNMMELIRNIAT 167 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + L K +V +E P R LT +T+AE Sbjct: 168 EHAGYSVFAGVGERTREGNDFYHEMKESQVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 227 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 YF +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 228 YFREEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT++ +V V D+ DP + + LD +VL+R +AE G YP VDPL S SR D Sbjct: 286 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDP 345 Query: 364 AWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 E V+ S+ + R++E +DI I G Sbjct: 346 LIVGQEHYQVARSVQGNLQRYKELKDIIAILG 377 >gi|295101398|emb|CBK98943.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium prausnitzii L2-6] Length = 464 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 159/305 (52%), Gaps = 10/305 (3%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GRV N LG+P+D + + I P +Q + +TGI+V+D+ Sbjct: 82 PVGDQCLGRVFNLLGEPVD-NKPAPTPEAYWPIHRPAPSYEEQQSTTEILETGIKVVDLI 140 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + + + + VGER RE + + Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGERTREGNDLYGEMTES 200 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + K+ +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ Sbjct: 201 GVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFT 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R +A +G YP VDPL S SR L+ + + ++ ++ ++ R++E +DI Sbjct: 319 HLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIARAVQKVLQRYKELQDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAIMG 383 >gi|302767210|ref|XP_002967025.1| hypothetical protein SELMODRAFT_144585 [Selaginella moellendorffii] gi|300165016|gb|EFJ31624.1| hypothetical protein SELMODRAFT_144585 [Selaginella moellendorffii] Length = 427 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 105/312 (33%), Positives = 165/312 (52%), Gaps = 23/312 (7%) Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 C GR++N +G+PID GD D + I + P + ++ TGI+V+D+ P Sbjct: 34 CTLGRIMNVIGEPIDEIGDFVT---DHYLPIHREAPVFTEQSTEQEVLVTGIKVVDLLAP 90 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE +E IE Sbjct: 91 YQRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYKEMIESG 149 Query: 209 --YLGD--NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 LGD N K +V +E P R LT +T+AEYF ++G +VLL +D+I RF Sbjct: 150 VIKLGDKQNESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFT 209 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 210 QANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDP 267 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R ++E G YP VDPL S SR L+ + D + + ++ Sbjct: 268 APATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPRVIGGDHYQCARDVQKVLQS 327 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 328 YKNLQDIIAILG 339 >gi|297569851|ref|YP_003691195.1| ATP synthase F1, beta subunit [Desulfurivibrio alkaliphilus AHT2] gi|296925766|gb|ADH86576.1| ATP synthase F1, beta subunit [Desulfurivibrio alkaliphilus AHT2] Length = 473 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 157/299 (52%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR++N +G+ +DG + K D M + K PA Q E +TGI+VID+ P G Sbjct: 94 GRIMNVVGRSVDGMGEI-KSD-KMRPIHKPAPAFTEQDTEVHVLETGIKVIDLLVPFPRG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G GK+ ++ + IS+ VGER RE + + L K+ Sbjct: 152 GKMGLFGGAGCGKTVIMMEMVNNIAMHHGGISVFCGVGERTREGNDLYHEMKESGVLPKA 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V E P R LT ++ AEYF +G +VLL +D+I RF + E++ G + Sbjct: 212 ALVYGQMTEPPGARSRVALTGLSAAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRI 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ ++L L ERI + KG+ITAV V V D+ DP + + LDG + Sbjct: 272 PSAVGYQPTLGTDLGGLQERI--TSTTKGSITAVQCVYVPADDLTDPAPATTFAHLDGTV 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D D ++ + + ++++ +DI I G Sbjct: 330 VLSRQIAELGIYPAVDPLDSTSRILDPNVLGEDHYQVARGVQVTLQKYKDLQDIIAILG 388 >gi|292492281|ref|YP_003527720.1| ATP synthase F1 subunit beta [Nitrosococcus halophilus Nc4] gi|291580876|gb|ADE15333.1| ATP synthase F1, beta subunit [Nitrosococcus halophilus Nc4] Length = 466 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 161/299 (53%), Gaps = 13/299 (4%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHGQ 162 RV+N G+P+DG L S + P A+++ R + + +TGI+VID+ P G Sbjct: 97 RVLNIFGEPLDGSPPLAPQ--SYRNIHGKPLALHQARGINEILETGIKVIDLLCPFIRGG 154 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LKKS 217 + G+F G+G+GK+ L+ F + +S+ VGER RE E D L D + +S Sbjct: 155 KTGLFGGAGVGKTVLIMEFMHAIAHIHKGVSVFAGVGERIREGHELWHD-LQDAAVMSQS 213 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 ++V DESP +R LTA+T AEY + VL ++D++ RF + EI++ G + Sbjct: 214 LLVFGEMDESPGVRFRIGLTALTYAEYLRDTLHKEVLFLMDNVFRFVQAGSEISSLLGRM 273 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P GY ++ +E+ + ERI +KG ITAV +V V D+ DP ++ S LD + Sbjct: 274 PATAGYQPTLATEVAEMEERI--VSTDKGAITAVQAVYVPADDMTDPAVSTILSHLDTTV 331 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 +L+R+ A +G YP VDPL S S+L D+ D ++ + + R+ E DI + G Sbjct: 332 ILSRAQAGKGIYPAVDPLRSGSKLMDRHILGDRHYAIAEGVREHLARYHELEDIMTMLG 390 >gi|118573713|sp|Q6MAK7|ATPB_PARUW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 464 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 162/299 (54%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N LG+PID ++ ++S + K P Q + F+TGI+VID+ P G Sbjct: 88 GRLLNVLGQPIDEMGAIENAEISP--IHKASPTFEEQDTQGVIFETGIKVIDLLCPYTKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GKS ++ + S+ +GER RE + ++E L K+ Sbjct: 146 GKVGLFGGAGVGKSVIVMELIHNIATHHGGYSVFCGIGERTREGNDLWLEMKESGILSKT 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE+F + NVLL +D+I RF + E++ G + Sbjct: 206 SLVFGQMNEPPGARMRVGLTGLTMAEHFRDQEHQNVLLFIDNIFRFVQAGSEVSALLGRM 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ L ERI + + G+IT+V ++ V D++ DP S+ LD Sbjct: 266 PSAVGYQPTLASEIGSLQERI--TSTKHGSITSVQAIYVPADDYTDPAPASIFPHLDAAT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR+ D +E V+ + ++ R+++ +DI I G Sbjct: 324 TLSRQIAELGIYPAVDPLNSSSRILDPHVLGEEHYQVARQVQKVLQRYKDLQDIIAILG 382 >gi|112791396|gb|ABI21968.1| ATP synthase beta subunit [Pectobacterium cypripedii] Length = 426 Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 157/309 (50%), Gaps = 21/309 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME---------IMSKVPPAMNRQRVEKGFKTGIR 150 GR++N LG+PID KGDL E I P + ++ +TGI+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDLKEEDGSAVEVSSIHRAAPSYEEQSNSQELLETGIK 112 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207 VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE +F Sbjct: 113 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 172 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + Sbjct: 173 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 232 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP Sbjct: 233 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 290 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + + LD + L+R +A G YP VDPL S SR D E V+ + L+ R++E Sbjct: 291 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 350 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 351 LKDIIAILG 359 >gi|332017324|gb|EGI58074.1| ATP synthase subunit beta, mitochondrial [Acromyrmex echinatior] Length = 489 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 163/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D I + P ++ ++ TGI+V+ Sbjct: 126 IRIPVGAETLGRIINVIGEPIDERGPIAT-DKVAPIHADAPEFVHMSVEQEILVTGIKVV 184 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 185 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 243 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 244 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 303 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 304 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 361 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 362 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARDVQKI 421 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 422 LQDYKSLQDIIAILG 436 >gi|229577383|ref|NP_001153366.1| ATP synthase subunit beta, mitochondrial [Nasonia vitripennis] Length = 517 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 165/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + L+ I + P ++ ++ TGI+V+ Sbjct: 123 IRIPVGAETLGRIINVIGEPIDERGPIPTDKLA-SIHADAPEFVDMSVEQEILVTGIKVV 181 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE +E Sbjct: 182 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYQE 240 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 241 MIESGVISLKDKTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 300 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 301 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 358 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 359 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 418 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 419 LQDYKSLQDIIAILG 433 >gi|125624725|ref|YP_001033208.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. cremoris MG1363] gi|124493533|emb|CAL98514.1| ATP synthase F1, beta subunit [Lactococcus lactis subsp. cremoris MG1363] Length = 486 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG IDG + I K P + TGI+V+D+ P G Sbjct: 107 LGRVFNVLGDVIDGGEDFPADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYLKG 166 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 167 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 226 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 227 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLGRM 286 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 287 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 344 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L + + ++ + ++ R++E +DI I G Sbjct: 345 NLERRLTQMGIYPAVDPLASSSRALTPEIVGEEHYEVAMEVQRVLQRYKELQDIIAILG 403 >gi|260426709|ref|ZP_05780688.1| ATP synthase F1, beta subunit [Citreicella sp. SE45] gi|260421201|gb|EEX14452.1| ATP synthase F1, beta subunit [Citreicella sp. SE45] Length = 476 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 156/296 (52%), Gaps = 12/296 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ G DG +L I + PP + + F TGI+VID+ PL G Sbjct: 91 LGRLLDVTGATGDGLGALPDDTPRRPIHAPPPPLGAQGAGSEIFYTGIKVIDLLAPLAQG 150 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 + +F G+G+GK+ L+ +M AR + + S VGER RE E + D L Sbjct: 151 GKAAMFGGAGVGKTVLVMELINAMVARYEGIS--VFSGVGERSREGHEMLSDMTAAGVLD 208 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++V+V +E P R P+TA+ IAE+F ++ NVLL++D++ RF + E++ G Sbjct: 209 RTVLVYGQMNEPPGARWRVPMTALAIAEHFRDAEARNVLLLMDNVFRFVQAGSEVSGLLG 268 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 + GY ++ +E+ L ERI SE ITA+ +V V D+ DP ++ + +D Sbjct: 269 RMASRVGYQPTLATEVAELQERIAASESAA--ITAIEAVYVPADDFTDPAVTTIATHVDS 326 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 +VL+R++A +G YP VDP+AS S L D DE + + + I + E +D+ Sbjct: 327 TVVLSRAMAADGMYPAVDPIASGSILLDPLILGDEHVSVANQVRRAIEHYRELQDV 382 >gi|160943200|ref|ZP_02090436.1| hypothetical protein FAEPRAM212_00686 [Faecalibacterium prausnitzii M21/2] gi|158445439|gb|EDP22442.1| hypothetical protein FAEPRAM212_00686 [Faecalibacterium prausnitzii M21/2] Length = 470 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ + LG+PIDG ++ + I K P ++ + +TGI+VID+ P G Sbjct: 86 GRMFDPLGRPIDGKGAVDELP-HWPIHRKAPGFAEQKPATEILETGIKVIDLLAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ + + I + VGER RE + + L K+ Sbjct: 145 KIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGCDLWGEMNASGVLDKTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF + +VLL +D+I RF + E++ G +P Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLFIDNIFRFVQAGSEVSALMGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +EL L ERI + + G+IT+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLANELGALQERI--TSTKDGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R + E+G YP VDPLAS SR+ + +E ++ + ++ R++E +DI I G Sbjct: 323 LSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVARKVQSILQRYQELQDIIAILG 380 >gi|295105220|emb|CBL02764.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium prausnitzii SL3/3] Length = 470 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ + LG+PIDG ++ + I K P ++ + +TGI+VID+ P G Sbjct: 86 GRMFDPLGRPIDGKGAVDELP-HWPIHRKAPGFAEQKPATEILETGIKVIDLLAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ + + I + VGER RE + + L K+ Sbjct: 145 KIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGCDLWGEMNASGVLDKTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF + +VLL +D+I RF + E++ G +P Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLFIDNIFRFVQAGSEVSALMGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +EL L ERI + + G+IT+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLANELGALQERI--TSTKDGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R + E+G YP VDPLAS SR+ + +E ++ + ++ R++E +DI I G Sbjct: 323 LSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVARKVQSILQRYQELQDIIAILG 380 >gi|295100292|emb|CBK97837.1| ATP synthase F1 subcomplex beta subunit [Faecalibacterium prausnitzii L2-6] Length = 470 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 158/299 (52%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ + LG+PIDG S+ D+ I K P ++ + +TGI+VID+ P G Sbjct: 86 GRMFDPLGRPIDGKGSVD--DVPHWPIHRKAPSFAEQKPATEILETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + I + VGER RE + + L K+ Sbjct: 144 GKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGCDLWGEMNASGVLNKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF + +VLL +D+I RF + E++ G + Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLFIDNIFRFVQAGSEVSALMGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +EL L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLANELGALQERI--TSTRDGSITSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPLAS SR+ + +E ++ + + R++E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVARKVQATLQRYQELQDIIAILG 380 >gi|269914443|pdb|3GQB|B Chain B, Crystal Structure Of The A3b3 Complex From V-Atpase gi|269914445|pdb|3GQB|D Chain D, Crystal Structure Of The A3b3 Complex From V-Atpase Length = 464 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 98/316 (31%), Positives = 164/316 (51%), Gaps = 22/316 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ S GR N +GKPIDG + + + I + R++ E+ +TGI ID Sbjct: 81 RLGVSKEMLGRRFNGIGKPIDGLPPITP-EKRLPITGLPLNPVARRKPEQFIQTGISTID 139 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200 + L GQ++ +F+GSG+ + + + AR V+ + +G R Sbjct: 140 VMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQR 199 Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258 E+ FI+++ L +SV+ + +D+ I R + P A+T+AEY + + D +VL+IL Sbjct: 200 ELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTD 259 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +T ++ ++REI E+P RGYP ++++L + ER G E +KG++T + + + D Sbjct: 260 MTNYSEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDD 319 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVS 374 + PI D I +G I L+R L +G YPP+DPL S+SRL + K + ++ K VS Sbjct: 320 DRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVS 379 Query: 375 SLTHLIHRFEETRDIR 390 L + DIR Sbjct: 380 D--QLYSAYANGVDIR 393 >gi|260595802|ref|YP_003208373.1| F0F1 ATP synthase subunit beta [Cronobacter turicensis z3032] gi|260214979|emb|CBA26614.1| ATP synthase subunit beta [Cronobacter turicensis z3032] Length = 460 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFREEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|188580722|ref|YP_001924167.1| F0F1 ATP synthase subunit beta [Methylobacterium populi BJ001] gi|179344220|gb|ACB79632.1| ATP synthase F1, beta subunit [Methylobacterium populi BJ001] Length = 484 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 104/320 (32%), Positives = 161/320 (50%), Gaps = 22/320 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ GR++N +G+PID + + D I P + + TGI+V+ Sbjct: 86 IRVPVGHNTLGRIMNVIGEPIDEAGPI-EADTYRAIHQPAPSYDEQSTEAQILVTGIKVV 144 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 145 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHSGYSVFAG-VGERTREGNDLYHE 203 Query: 205 FIEDYLGDNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 IE + N K K +V +ESP R LT +TIAE F +G +VL Sbjct: 204 MIESNVNKNPKENNGSAEGSKCALVYGQMNESPGARSRVALTGLTIAEQFRDEGQDVLFF 263 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V Sbjct: 264 VDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYV 321 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS- 374 D+ DP + + LD VL+RS+AE+G YP VDPL S SR+ A +E V+ Sbjct: 322 PADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAILGEEHYDVAR 381 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++ +DI I G Sbjct: 382 RVQQTLQRYKSLQDIIAILG 401 >gi|118573528|sp|Q24MP1|ATPB_DESHY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 465 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LGK ID + + D S I P +++ +TGI+VID+ P Sbjct: 85 ATLGRIFNVLGKAIDNGEEV-HTDTSYPIHRPAPAFVDQDPSTVMLETGIKVIDLLAPYS 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + + Sbjct: 144 KGGKIGLFGGAGVGKTVLIQELINNIAMEHGGLSVFAGVGERTREGNDLWNEMRESGVID 203 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 204 KMAMVFGQMNEPPGARLRVGLTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSALLG 263 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + G+IT+V ++ V D+ DP + + LD Sbjct: 264 RMPSAVGYQPTLATEMGALQERI--TSTRNGSITSVQAIYVPADDLTDPAPATAFAHLDA 321 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VLNR+++E+G YP VDPL S SR L+ + + K+ + ++ +++E +DI I Sbjct: 322 TTVLNRAISEKGIYPAVDPLDSNSRILSPQIIGEEHYKVARDVQQILQKYKELQDIIAIL 381 Query: 394 G 394 G Sbjct: 382 G 382 >gi|4100657|gb|AAD00918.1| proton-translocating ATPase beta subunit [Streptococcus sanguinis] Length = 468 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFADDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|84385785|ref|ZP_00988815.1| ATP synthase subunit B [Vibrio splendidus 12B01] gi|86145156|ref|ZP_01063487.1| ATP synthase subunit B [Vibrio sp. MED222] gi|84379101|gb|EAP95954.1| ATP synthase subunit B [Vibrio splendidus 12B01] gi|85836733|gb|EAQ54853.1| ATP synthase subunit B [Vibrio sp. MED222] Length = 461 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G+ + S EI + P + + +TG++VID+ P G Sbjct: 87 GRIMNVLGQPIDECGEIGQKE-SYEIHREAPSYEEQANSTELLETGVKVIDLICPFAKGG 145 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +G+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTRQGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E + + + R++E +DI I G Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYDIAQKVQTTLQRYKELKDIIAILG 380 >gi|283836156|ref|ZP_06355897.1| hypothetical protein CIT292_10581 [Citrobacter youngae ATCC 29220] gi|291068349|gb|EFE06458.1| ATP synthase F1, beta subunit [Citrobacter youngae ATCC 29220] Length = 460 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGHPIDM-----KGDIGEEERWAIHRAAPTYEELSSSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|163814609|ref|ZP_02205998.1| hypothetical protein COPEUT_00760 [Coprococcus eutactus ATCC 27759] gi|158450244|gb|EDP27239.1| hypothetical protein COPEUT_00760 [Coprococcus eutactus ATCC 27759] Length = 453 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 163/299 (54%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ IDG + L D ++ + PP N+ V + +TGI+VID+ P G Sbjct: 77 GRLFNVLGETIDGKEDLS--DTEHWVIHREPPTFENQSPVIEILETGIKVIDLLAPYSKG 134 Query: 162 QRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + S I + VGER RE + + E + K+ Sbjct: 135 GKIGLFGGAGVGKTVLIQELIQNIASVHGGYSIFTGVGERSREGNDLWTEMSESGVIDKT 194 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF +VLL +D+I RF + E+++ G + Sbjct: 195 ALVFGQMNEPPGARMRVAETGLTMAEYFRDVNHQDVLLFIDNIFRFTQAGSEVSSLLGRM 254 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI +++ G++T+V +V V D+ DP + + LD + Sbjct: 255 PSAVGYQPTLANEMGELQERIASTKE--GSVTSVQAVYVPADDLTDPAPATTFAHLDANT 312 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E ++ + ++ +++E +DI I G Sbjct: 313 VLSRKIVEQGIYPAVDPLESSSRILEADIVGEEHYEVARRVQEILQKYKELQDIIAILG 371 >gi|149003278|ref|ZP_01828174.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP14-BS69] gi|237649213|ref|ZP_04523465.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae CCRI 1974] gi|237821822|ref|ZP_04597667.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae CCRI 1974M2] gi|147758738|gb|EDK65735.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP14-BS69] Length = 468 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|112791336|gb|ABI21938.1| ATP synthase beta subunit [Citrobacter freundii] Length = 421 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGHPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|322385223|ref|ZP_08058870.1| ATP synthase F1 sector beta subunit [Streptococcus cristatus ATCC 51100] gi|321270847|gb|EFX53760.1| ATP synthase F1 sector beta subunit [Streptococcus cristatus ATCC 51100] Length = 468 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFADDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|304413049|ref|ZP_07394522.1| membrane-bound ATP synthase, F1 complex, beta subunit [Candidatus Regiella insecticola LSR1] gi|304283892|gb|EFL92285.1| membrane-bound ATP synthase, F1 complex, beta subunit [Candidatus Regiella insecticola LSR1] Length = 462 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 8/301 (2%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR++N LG PID +G+ + I + P + +TGI+V+D+ P Sbjct: 84 AATLGRIMNVLGDPIDMKGPIGEKE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPF 142 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + + N L Sbjct: 143 AKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMDSNVL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 203 DKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQSILQRYQELKDIIAIL 380 Query: 394 G 394 G Sbjct: 381 G 381 >gi|52082213|ref|YP_081004.1| F0F1 ATP synthase subunit beta [Bacillus licheniformis ATCC 14580] gi|52787604|ref|YP_093433.1| F0F1 ATP synthase subunit beta [Bacillus licheniformis ATCC 14580] gi|319648086|ref|ZP_08002303.1| ATP synthase subunit beta [Bacillus sp. BT1B_CT2] gi|81825160|sp|Q65DX4|ATPB_BACLD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|52005424|gb|AAU25366.1| ATP synthase (subunit beta) [Bacillus licheniformis ATCC 14580] gi|52350106|gb|AAU42740.1| AtpD [Bacillus licheniformis ATCC 14580] gi|317389721|gb|EFV70531.1| ATP synthase subunit beta [Bacillus sp. BT1B_CT2] Length = 473 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 162/297 (54%), Gaps = 10/297 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+ ID D+ L D + + + + P ++ E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGENIDLDEPL-PADAAKDPIHREAPKFDQLSTEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AE+F K G +VL +D+I RF + E++ Sbjct: 209 GKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDKEGQDVLFFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L R L+E G YP VDPLAS SR L+ + + ++ S+ ++ R++E +DI Sbjct: 327 ATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYEVARSVQQILQRYKELQDI 383 >gi|237729043|ref|ZP_04559524.1| ATP synthase F1 sector subunit beta [Citrobacter sp. 30_2] gi|226909665|gb|EEH95583.1| ATP synthase F1 sector subunit beta [Citrobacter sp. 30_2] Length = 460 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGHPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + L+ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSLLQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|112791370|gb|ABI21955.1| ATP synthase beta subunit [Brenneria alni] Length = 421 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG P+D KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGDPVDM-----KGDIGEEERWAIHRPAPSYEELSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ RF+E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRFQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|194335228|ref|YP_002017022.1| ATP synthase F1, beta subunit [Pelodictyon phaeoclathratiforme BU-1] gi|226740658|sp|B4SAN6|ATPB_PELPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|194307705|gb|ACF42405.1| ATP synthase F1, beta subunit [Pelodictyon phaeoclathratiforme BU-1] Length = 462 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G PIDG + S I P + F+TGI+VID+ P G Sbjct: 86 LGRMLNVVGDPIDGRGPVNTKK-SYSIHRLAPRFDEISTKAEMFETGIKVIDLLEPYSRG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ + + S+ VGER RE + + + + K+ Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLWHEMMESGVIDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R+ LT ++IAEYF +G +VLL +D+I RF + E++ G + Sbjct: 205 ALVFGQMNEPPGARQRVALTGLSIAEYFRDEEGRDVLLFIDNIFRFTQAGSEVSALLGRM 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L +RI +KG++T+V ++ V D+ DP + + LD Sbjct: 265 PSAVGYQPTLATEMGELQDRI--VSTKKGSVTSVQAIYVPADDLTDPAPATAFAHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D D+ ++ L+ R+++ +DI I G Sbjct: 323 VLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQLLQRYKDLQDIIAILG 381 >gi|46447302|ref|YP_008667.1| F0F1 ATP synthase subunit beta [Candidatus Protochlamydia amoebophila UWE25] gi|46400943|emb|CAF24392.1| probable H+-transporting two-sector ATPase (beta chain, atpD) [Candidatus Protochlamydia amoebophila UWE25] Length = 486 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 162/299 (54%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N LG+PID ++ ++S + K P Q + F+TGI+VID+ P G Sbjct: 110 GRLLNVLGQPIDEMGAIENAEISP--IHKASPTFEEQDTQGVIFETGIKVIDLLCPYTKG 167 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GKS ++ + S+ +GER RE + ++E L K+ Sbjct: 168 GKVGLFGGAGVGKSVIVMELIHNIATHHGGYSVFCGIGERTREGNDLWLEMKESGILSKT 227 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE+F + NVLL +D+I RF + E++ G + Sbjct: 228 SLVFGQMNEPPGARMRVGLTGLTMAEHFRDQEHQNVLLFIDNIFRFVQAGSEVSALLGRM 287 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ SE+ L ERI + + G+IT+V ++ V D++ DP S+ LD Sbjct: 288 PSAVGYQPTLASEIGSLQERI--TSTKHGSITSVQAIYVPADDYTDPAPASIFPHLDAAT 345 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR+ D +E ++ + ++ R+++ +DI I G Sbjct: 346 TLSRQIAELGIYPAVDPLNSSSRILDPHVLGEEHYQVARQVQKVLQRYKDLQDIIAILG 404 >gi|120556779|ref|YP_961130.1| F0F1 ATP synthase subunit beta [Marinobacter aquaeolei VT8] gi|166201716|sp|A1U7H4|ATPB_MARAV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|120326628|gb|ABM20943.1| ATP synthase F1 subcomplex beta subunit [Marinobacter aquaeolei VT8] Length = 464 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 161/298 (54%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID +G+ + I K P ++ +TGI+VID+ P G Sbjct: 84 GRIMDVLGRPIDEQGDIGE-EERWAIHRKAPGYADQAASADLLETGIKVIDLICPFAKGG 142 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYYEMKESNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 202 AMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + S LD +V Sbjct: 262 SAVGYQPTLAEEMGQLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP +DPL S SR D ++ V+ + +++ R++E +DI I G Sbjct: 320 LSRDIASKGIYPAIDPLDSTSRQLDPLVIGEQHYNVARGVQNVLQRYKELKDIIAILG 377 >gi|253690617|ref|YP_003019807.1| ATP synthase F1, beta subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|259585447|sp|C6DJH2|ATPB_PECCP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|251757195|gb|ACT15271.1| ATP synthase F1, beta subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 460 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|237747183|ref|ZP_04577663.1| F0F1-type ATP synthase [Oxalobacter formigenes HOxBLS] gi|229378534|gb|EEO28625.1| F0F1-type ATP synthase [Oxalobacter formigenes HOxBLS] Length = 458 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 154/301 (51%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID + + + I K P ++ +TGI+VID+ P Sbjct: 81 ATLGRIMNVLGEPIDEQGPI-QTEERASIHRKAPAYSELSPSQEILETGIKVIDLVCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMQESNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +TIAE F +G +VL +D+I RF + E++ G Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDQGRDVLFFVDNIYRFTLAGTEVSALLG 258 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI + G+IT++ +V V D+ DP + + LD Sbjct: 259 RMPSAVGYQPTLAEEMGKLQERI--TSTNTGSITSIQAVYVPADDLTDPSPATTFAHLDS 316 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D +E + ++ R++E RDI I Sbjct: 317 TVVLSRDIASLGIYPAVDPLDSTSRQLDPHVVGEEHYNTARQVQGILQRYKELRDIIAIL 376 Query: 394 G 394 G Sbjct: 377 G 377 >gi|254427887|ref|ZP_05041594.1| ATP synthase F1, beta subunit [Alcanivorax sp. DG881] gi|196194056|gb|EDX89015.1| ATP synthase F1, beta subunit [Alcanivorax sp. DG881] Length = 460 Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID +G+ D M I P ++ + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPIDEAGPIGE-DERMPIHRAAPTYADQAATNELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD + Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVS 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP +DPL S SR D E + + ++ RF+E +DI I G Sbjct: 320 LSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARGVQTVLQRFKELKDIIAILG 377 >gi|328785025|ref|XP_624156.3| PREDICTED: ATP synthase subunit beta, mitochondrial [Apis mellifera] Length = 516 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + L+ I + P ++ ++ TGI+V+ Sbjct: 122 IRIPVGAETLGRIINVIGEPIDERGPIPTDKLA-PIHADAPEFVDMSVEQEILVTGIKVV 180 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 181 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 239 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 240 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 299 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 300 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 357 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 358 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKI 417 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 418 LQDYKSLQDIIAILG 432 >gi|307181472|gb|EFN69064.1| ATP synthase subunit beta, mitochondrial [Camponotus floridanus] Length = 515 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 163/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + L+ I + P + ++ TGI+V+ Sbjct: 121 IRIPVGAETLGRIINVIGEPIDERGPIPTDKLA-PIHADAPEFVEMSVEQEILVTGIKVV 179 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 180 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 238 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 239 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 298 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 299 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 356 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 357 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNIARGVQKI 416 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 417 LQDYKSLQDIIAILG 431 >gi|89897658|ref|YP_521145.1| F0F1 ATP synthase subunit beta [Desulfitobacterium hafniense Y51] gi|89337106|dbj|BAE86701.1| ATP synthase F1 beta subunit [Desulfitobacterium hafniense Y51] Length = 456 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LGK ID + + D S I P +++ +TGI+VID+ P Sbjct: 76 ATLGRIFNVLGKAIDNGEEV-HTDTSYPIHRPAPAFVDQDPSTVMLETGIKVIDLLAPYS 134 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + + Sbjct: 135 KGGKIGLFGGAGVGKTVLIQELINNIAMEHGGLSVFAGVGERTREGNDLWNEMRESGVID 194 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 195 KMAMVFGQMNEPPGARLRVGLTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSALLG 254 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + G+IT+V ++ V D+ DP + + LD Sbjct: 255 RMPSAVGYQPTLATEMGALQERI--TSTRNGSITSVQAIYVPADDLTDPAPATAFAHLDA 312 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VLNR+++E+G YP VDPL S SR L+ + + K+ + ++ +++E +DI I Sbjct: 313 TTVLNRAISEKGIYPAVDPLDSNSRILSPQIIGEEHYKVARDVQQILQKYKELQDIIAIL 372 Query: 394 G 394 G Sbjct: 373 G 373 >gi|296268885|ref|YP_003651517.1| ATP synthase F1 subunit beta [Thermobispora bispora DSM 43833] gi|296091672|gb|ADG87624.1| ATP synthase F1, beta subunit [Thermobispora bispora DSM 43833] Length = 482 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 158/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG+P+D + + I PP + + TGI+VID+ TP G Sbjct: 102 GHVWNALGEPLDVPKASLEVKERWPIHRPAPPLDQLEPKTEILVTGIKVIDLLTPYMKGG 161 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ R + + VGER RE + ++E LK + Sbjct: 162 KIGLFGGAGVGKTVLIQEMIRRVAMKFSGTSVFAGVGERTREGNDLWLEMKEAGVLKDTA 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF+ + E++T G +P Sbjct: 222 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFSQAGSEVSTLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 282 SAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDITDPAPHNAFAHLDAQTV 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIRLIGG 394 L+R ++E+G YP VDPL S SR+ D +E V+ T ++ R++E +DI I G Sbjct: 340 LSRPISEKGIYPAVDPLESSSRILDPQIVGEEHYQVAQETKRILQRYKELQDIIAILG 397 >gi|254708799|ref|ZP_05170610.1| F0F1 ATP synthase subunit beta [Brucella pinnipedialis B2/94] gi|256030325|ref|ZP_05443939.1| F0F1 ATP synthase subunit beta [Brucella pinnipedialis M292/94/1] gi|261316292|ref|ZP_05955489.1| ATP synthase subunit beta [Brucella pinnipedialis B2/94] gi|265987359|ref|ZP_06099916.1| ATP synthase subunit beta [Brucella pinnipedialis M292/94/1] gi|261295515|gb|EEX99011.1| ATP synthase subunit beta [Brucella pinnipedialis B2/94] gi|264659556|gb|EEZ29817.1| ATP synthase subunit beta [Brucella pinnipedialis M292/94/1] Length = 521 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 15/305 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K + I P + + + TGI+V+D+ P G Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL---- 210 +IG+F G+G+GK+ L+ F + + + VGER RE E IE + Sbjct: 193 GKIGLFGGAGVGKTVLIMEFINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKLG 252 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 G K+ +V +E P R L+ +T+AE F +G +VL +D+I RF + E++ Sbjct: 253 GGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEVS 312 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + + Sbjct: 313 ALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSFA 370 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ R++ +DI Sbjct: 371 HLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEHYAVARQVQSILQRYKALQDI 430 Query: 390 RLIGG 394 I G Sbjct: 431 IAILG 435 >gi|256545233|ref|ZP_05472598.1| V-type sodium ATPase, B subunit [Anaerococcus vaginalis ATCC 51170] gi|256399060|gb|EEU12672.1| V-type sodium ATPase, B subunit [Anaerococcus vaginalis ATCC 51170] Length = 457 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 106/354 (29%), Positives = 179/354 (50%), Gaps = 23/354 (6%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID-G 115 +GQV++I+ D V + G ++ SL D+V F I + GR N + +PID G Sbjct: 40 IGQVVKIDDDTVTVEVFGNTQDFSLNDIVVEFEEKPLEIPLNESILGRTFNGIARPIDDG 99 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + S+E P A R+ +TGI IDI T L GQ++ +F+GSG+ + Sbjct: 100 GEIYSDKFYSVEGNPLNPVA--REYPRNFIQTGISSIDILTTLIRGQKLPIFSGSGMPHN 157 Query: 176 TLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDES 227 + + R CF + + +G + E F + + +K VV+ + Sbjct: 158 EIAAQIVRQAKLKTEEDFCF---VFAAMGIKKDEAMFFEDAFTKAGVKDKVVMYENLADD 214 Query: 228 PILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 PI+ ++ P A+T AEY + K +VL+I+ IT +A ++RE+++ E+P +GYP Sbjct: 215 PIMERLITPKCALTAAEYLAFEKNKHVLVIITDITSYAEALREVSSIRQEVPSRKGYPGY 274 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 ++S+L L ER G + G++T + + + D+ PI D I +G IV++RSL ++ Sbjct: 275 LYSDLASLYERAGMIDGVNGSVTLIPILTMPNDDITHPIPDLTGYITEGQIVIDRSLDQK 334 Query: 346 GRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 G YPP++ L S+SRL + +D L++ L + +E R+I I G Sbjct: 335 GIYPPINILPSLSRLMKDGIGEGFTRSDHDDLMNQLYESYSKVQEIRNISQIVG 388 >gi|218676677|ref|YP_002395496.1| F0F1 ATP synthase subunit beta [Vibrio splendidus LGP32] gi|218324945|emb|CAV26767.1| ATP synthase subunit B [Vibrio splendidus LGP32] Length = 461 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G+ + S EI + P + + +TG++VID+ P G Sbjct: 87 GRIMNVLGQPIDECGEIGQKE-SYEIHREAPSYEEQANSTELLETGVKVIDLICPFAKGG 145 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +G+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTRQGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E + + + R++E +DI I G Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYDIAQKVQTTLQRYKELKDIIAILG 380 >gi|195450700|ref|XP_002072595.1| GK13685 [Drosophila willistoni] gi|194168680|gb|EDW83581.1| GK13685 [Drosophila willistoni] Length = 506 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P + ++ TGI+V+ Sbjct: 110 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAPIHAEAPEFVEMSVEQEILVTGIKVV 168 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 169 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 228 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 287 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 345 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 406 LQDYKSLQDIIAILG 420 >gi|307822047|ref|ZP_07652279.1| ATP synthase F1, beta subunit [Methylobacter tundripaludum SV96] gi|307736613|gb|EFO07458.1| ATP synthase F1, beta subunit [Methylobacter tundripaludum SV96] Length = 464 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 107/316 (33%), Positives = 163/316 (51%), Gaps = 10/316 (3%) Query: 81 ISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 +S G VF G P + C GR++N G+P+DG SL K + I SK P Sbjct: 72 LSRGMTVFDTGAPLHVPVSEQCLGRLLNIFGEPLDGLPSLPKTEFR-NIHSKPLPLSEAI 130 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF--ARSDCFDKV-IISLVG 196 + +TGI+VID+ P G + G+F G+G+GK+ L+ F A S V + + VG Sbjct: 131 GMSGILETGIKVIDLLCPFVKGGKTGLFGGAGVGKTVLVMEFIHAVSAIHKGVSVFAGVG 190 Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 ER RE E + + +++V DESP +R L+A+T AEY + VL Sbjct: 191 ERIREAHELWREMQQAGVMDDTLMVFGQMDESPGVRFRVALSALTYAEYLRDTLHKEVLF 250 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 ++D++ RF + EI++ G +P GY ++ +E+ L +RI +G IT+V +V Sbjct: 251 VVDNVFRFVQAGSEISSLLGRMPATVGYQPTLTTEVAELQDRI--LSTRQGAITSVQAVY 308 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP ++ S LD ++L+R A +G YP VDPL S S+L DK D V+ Sbjct: 309 VPADDMTDPAVSAILSHLDTTVILSRDQASKGIYPAVDPLRSSSKLMDKHTLGDRHYAVA 368 Query: 375 S-LTHLIHRFEETRDI 389 + + R+ E DI Sbjct: 369 KGVREHLARYHELEDI 384 >gi|225861341|ref|YP_002742850.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae Taiwan19F-14] gi|298230577|ref|ZP_06964258.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255872|ref|ZP_06979458.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503243|ref|YP_003725183.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae TCH8431/19A] gi|254808170|sp|C1CSC8|ATPB_STRZT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|225727517|gb|ACO23368.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae Taiwan19F-14] gi|298238838|gb|ADI69969.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae TCH8431/19A] gi|327389691|gb|EGE88036.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA04375] Length = 468 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|156936112|ref|YP_001440028.1| F0F1 ATP synthase subunit beta [Cronobacter sakazakii ATCC BAA-894] gi|166201702|sp|A7MMW9|ATPB_ENTS8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|156534366|gb|ABU79192.1| hypothetical protein ESA_04006 [Cronobacter sakazakii ATCC BAA-894] Length = 460 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|24638766|ref|NP_726631.1| ATP synthase-beta, isoform A [Drosophila melanogaster] gi|194913430|ref|XP_001982694.1| GG16404 [Drosophila erecta] gi|47606749|sp|Q05825|ATPB_DROME RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|7304361|gb|AAF59391.1| ATP synthase-beta, isoform A [Drosophila melanogaster] gi|21392084|gb|AAM48396.1| RE10864p [Drosophila melanogaster] gi|190647910|gb|EDV45213.1| GG16404 [Drosophila erecta] gi|220947936|gb|ACL86511.1| ATPsyn-beta-PA [synthetic construct] gi|220957230|gb|ACL91158.1| ATPsyn-beta-PA [synthetic construct] Length = 505 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P + ++ TGI+V+ Sbjct: 109 IRIPVGAETLGRIINVIGEPIDERGPIDT-DKTAAIHAEAPEFVQMSVEQEILVTGIKVV 167 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 168 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 226 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 227 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 286 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 287 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 344 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 345 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 404 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 405 LQDYKSLQDIIAILG 419 >gi|257439241|ref|ZP_05614996.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165] gi|257198283|gb|EEU96567.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165] Length = 470 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 157/299 (52%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ + LG+PIDG + DL I K P ++ + +TGI+VID+ P G Sbjct: 86 GRMFDPLGRPIDGKGPVD--DLPHWPIHRKAPSFAEQKPATEILETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + I + VGER RE + + L K+ Sbjct: 144 GKIGLFGGAGVGKTVLIQELIHNVATEHGGYSIFTGVGERSREGCDLWGEMNASGVLNKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF + +VLL +D+I RF + E++ G + Sbjct: 204 ALVFGQMNEPPGARMRVAETGLTMAEYFREETHKDVLLFIDNIFRFVQAGSEVSALMGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +EL L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 264 PSAVGYQPTLANELGALQERI--TSTRDGSITSVQAVYVPADDLTDPAPATTFAHLDATT 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPLAS SR+ + +E ++ + + R++E +DI I G Sbjct: 322 VLSRKIVEQGIYPAVDPLASTSRILEADIVGEEHYRVARKVQATLQRYQELQDIIAILG 380 >gi|239944301|ref|ZP_04696238.1| F0F1 ATP synthase subunit beta [Streptomyces roseosporus NRRL 15998] gi|239990755|ref|ZP_04711419.1| F0F1 ATP synthase subunit beta [Streptomyces roseosporus NRRL 11379] gi|291447768|ref|ZP_06587158.1| H(+)-transporting ATP synthase [Streptomyces roseosporus NRRL 15998] gi|291350715|gb|EFE77619.1| H(+)-transporting ATP synthase [Streptomyces roseosporus NRRL 15998] Length = 480 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ ++ + I K P + + F+TG++V+D+ TP G Sbjct: 101 GKVFNTLGQILNEPEAESQITERWPIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ M R + D V + + VGER RE + I++ L K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIMRVAKLHDGVSVFAGVGERTREGNDLIDEMTDSGVLDKTA 220 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 221 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 280 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 281 SAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++E+G YP VDPL S SR+ D + S D S + ++ ++++ +DI I G Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYNAASRVKGILQKYKDLQDIIAILG 396 >gi|71280422|ref|YP_266830.1| F0F1 ATP synthase subunit beta [Colwellia psychrerythraea 34H] gi|118573522|sp|Q48AW0|ATPB_COLP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71146162|gb|AAZ26635.1| ATP synthase F1, beta subunit [Colwellia psychrerythraea 34H] Length = 461 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ D I + P + + +TGI+VID+ P G Sbjct: 86 LGRIMNVLGEPIDEAGPIGEKD-RWSIHREAPAYAEQSMSNELLETGIKVIDLVCPFAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 205 SLVYGQMNEPPGNRLRVAFTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + KG+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTNKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP +DPL S SR D E + + ++ R++E +DI I G Sbjct: 323 LSRDIASQGIYPAIDPLDSSSRQLDPLVVGTEHYETARGVQTVLQRYKELKDIIAILG 380 >gi|23015479|ref|ZP_00055254.1| COG0055: F0F1-type ATP synthase, beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 474 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID +G ++ I + P +++ + TGI+VID+ P C G Sbjct: 87 LGRIINVIGEPIDERGPIGN-KTTLPIHADAPDFVDQSTETEILVTGIKVIDLLAPYCKG 145 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + + Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIKL 204 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R L+ +T+AEYF +G +VL +D+I RF + E+ Sbjct: 205 DGPGSKVALVYGQMNEPPGARARVALSGLTVAEYFRDVEGQDVLFFVDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 265 SALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATSF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388 + LD VLNR +AE G YP VDPL S SR+ D + D + + ++ ++ +D Sbjct: 323 AHLDATTVLNRQIAELGIYPAVDPLDSTSRVLDPRVVGNDHYQTARDVQRILQTYKSLQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|301794520|emb|CBW36962.1| ATP synthase beta chain [Streptococcus pneumoniae INV104] Length = 468 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|112791360|gb|ABI21950.1| ATP synthase beta subunit [Serratia marcescens] Length = 421 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 158/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ +TGI+V+D+ Sbjct: 58 ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVMDLI 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R++A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 291 LDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|37524072|ref|NP_927416.1| F0F1 ATP synthase subunit beta [Photorhabdus luminescens subsp. laumondii TTO1] gi|81572787|sp|Q7NA94|ATPB_PHOLL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|36783495|emb|CAE12335.1| ATP synthase beta chain [Photorhabdus luminescens subsp. laumondii TTO1] Length = 460 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 106/336 (31%), Positives = 168/336 (50%), Gaps = 17/336 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + +S G V G + GR++N LG+PID KGD+ E Sbjct: 51 VVRCIAMGTSDGLSRGLSVTDLGHPIEVPVGKATLGRIMNVLGEPIDM-----KGDIGEE 105 Query: 128 ----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 I P ++ +TGI+V+D+ P G ++G+F G+G+GK+ + R Sbjct: 106 ERWAIHRPAPSYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 165 Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239 + + + + VGER RE +F + N L K +V +E P R LT + Sbjct: 166 NIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGL 225 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 T+AE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI Sbjct: 226 TMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 283 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + + G+IT+V +V V D+ DP + + LD +VL+R +A G YP VDPL S SR Sbjct: 284 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 343 Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 D E V+ + ++ R++E +DI I G Sbjct: 344 QLDPLVVGQEHYNVARGVQSILQRYQELKDIIAILG 379 >gi|53716798|ref|YP_104961.1| F0F1 ATP synthase subunit beta [Burkholderia mallei ATCC 23344] gi|67641242|ref|ZP_00440025.1| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4] gi|121597143|ref|YP_990887.1| F0F1 ATP synthase subunit beta [Burkholderia mallei SAVP1] gi|126446164|ref|YP_001077353.1| F0F1 ATP synthase subunit beta [Burkholderia mallei NCTC 10247] gi|254176251|ref|ZP_04882909.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399] gi|254202881|ref|ZP_04909243.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH] gi|254208221|ref|ZP_04914570.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU] gi|254359466|ref|ZP_04975738.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280] gi|81823855|sp|Q62EB7|ATPB2_BURMA RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|190358217|sp|A3MAR7|ATPB2_BURM7 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|190358218|sp|A1UY34|ATPB2_BURMS RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|52422768|gb|AAU46338.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 23344] gi|121224941|gb|ABM48472.1| ATP synthase F1, beta subunit [Burkholderia mallei SAVP1] gi|126239018|gb|ABO02130.1| ATP synthase F1, beta subunit [Burkholderia mallei NCTC 10247] gi|147745926|gb|EDK53004.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH] gi|147750908|gb|EDK57976.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU] gi|148028653|gb|EDK86613.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280] gi|160697293|gb|EDP87263.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399] gi|238522140|gb|EEP85586.1| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4] Length = 534 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 16/309 (5%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148 G R+ GR+++ G P GDD D+ + + P + Q+ F TG Sbjct: 108 GPIRVPVGDAVLGRLLSVTGAP--GDDGAALAADVERRPIHRGAPLLAEQKSANALFATG 165 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVR 203 I+VID+ PL G + +F G+G+GK+ + +M R + + +GER RE Sbjct: 166 IKVIDLLAPLAQGGKAAMFGGAGVGKTVFVMELIHAMVERYRGIS--VFAGIGERSREGH 223 Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 E + D G L ++V+V +E P R PLTA+ IAEYF + NVLL++D++ R Sbjct: 224 EMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFR 283 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G LP GY ++ SE+ L ERI + E +TA+ +V V D+ Sbjct: 284 FVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFT 341 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP ++ + +D +VL+R++A EG YP +DP+AS S L D + V+ + +I Sbjct: 342 DPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVI 401 Query: 381 HRFEETRDI 389 + E +D+ Sbjct: 402 EHYRELQDV 410 >gi|229819802|ref|YP_002881328.1| ATP synthase F1, beta subunit [Beutenbergia cavernae DSM 12333] gi|229565715|gb|ACQ79566.1| ATP synthase F1, beta subunit [Beutenbergia cavernae DSM 12333] Length = 491 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 163/304 (53%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 G V N +G P+D + +EI + + PPA ++ + F+TGI+VID+ T Sbjct: 110 GHVFNVIGDPLDVEAE------KLEITERWSIHRKPPAFDQLESKTSMFETGIKVIDLLT 163 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + D +S+ VGER RE + I + Sbjct: 164 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIHEMEEAG 223 Query: 214 L-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 + K+ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 224 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVST 283 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + Sbjct: 284 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSLQAIYVPADDYTDPAPATTFAH 341 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPLAS SR+ D + D ++ + + ++ + +E +DI Sbjct: 342 LDATTELSRDIASRGLYPAVDPLASTSRILDPRYVGEDHYRVATRVKSILQKNKELQDII 401 Query: 391 LIGG 394 I G Sbjct: 402 AILG 405 >gi|195469417|ref|XP_002099634.1| ATPsyn-beta [Drosophila yakuba] gi|194185735|gb|EDW99346.1| ATPsyn-beta [Drosophila yakuba] Length = 505 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P + ++ TGI+V+ Sbjct: 109 IRIPVGAETLGRIINVIGEPIDERGPIDT-DKTAAIHAEAPEFVQMSVEQEILVTGIKVV 167 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 168 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 226 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 227 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 286 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 287 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 344 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 345 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 404 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 405 LQDYKSLQDIIAILG 419 >gi|148988552|ref|ZP_01819985.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP6-BS73] gi|148992608|ref|ZP_01822276.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP9-BS68] gi|148997432|ref|ZP_01825037.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP11-BS70] gi|149011742|ref|ZP_01832938.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP19-BS75] gi|168483883|ref|ZP_02708835.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|168489668|ref|ZP_02713867.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae SP195] gi|168492577|ref|ZP_02716720.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC0288-04] gi|168493409|ref|ZP_02717552.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC3059-06] gi|182684462|ref|YP_001836209.1| ATP synthase subunit B [Streptococcus pneumoniae CGSP14] gi|225854952|ref|YP_002736464.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae JJA] gi|225857133|ref|YP_002738644.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae P1031] gi|225859265|ref|YP_002740775.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae 70585] gi|303254154|ref|ZP_07340267.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae BS455] gi|303260730|ref|ZP_07346690.1| ATP synthase subunit B [Streptococcus pneumoniae SP-BS293] gi|303263057|ref|ZP_07348989.1| ATP synthase subunit B [Streptococcus pneumoniae SP14-BS292] gi|303264461|ref|ZP_07350381.1| ATP synthase subunit B [Streptococcus pneumoniae BS397] gi|303267439|ref|ZP_07353293.1| ATP synthase subunit B [Streptococcus pneumoniae BS457] gi|303269786|ref|ZP_07355535.1| ATP synthase subunit B [Streptococcus pneumoniae BS458] gi|307068152|ref|YP_003877118.1| F0F1-type ATP synthase subunit beta [Streptococcus pneumoniae AP200] gi|226740683|sp|B2IQX0|ATPB_STRPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808168|sp|C1CF93|ATPB_STRZJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808169|sp|C1CLK6|ATPB_STRZP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|259585452|sp|C1C899|ATPB_STRP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|147756487|gb|EDK63528.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP11-BS70] gi|147764173|gb|EDK71105.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP19-BS75] gi|147925753|gb|EDK76828.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP6-BS73] gi|147928625|gb|EDK79639.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP9-BS68] gi|172042786|gb|EDT50832.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|182629796|gb|ACB90744.1| ATP synthase subunit B [Streptococcus pneumoniae CGSP14] gi|183571943|gb|EDT92471.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae SP195] gi|183573274|gb|EDT93802.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC0288-04] gi|183576634|gb|EDT97162.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC3059-06] gi|225721547|gb|ACO17401.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae 70585] gi|225722310|gb|ACO18163.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae JJA] gi|225725216|gb|ACO21068.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae P1031] gi|301802228|emb|CBW34978.1| ATP synthase beta chain [Streptococcus pneumoniae INV200] gi|302598880|gb|EFL65913.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae BS455] gi|302635820|gb|EFL66323.1| ATP synthase subunit B [Streptococcus pneumoniae SP14-BS292] gi|302638133|gb|EFL68608.1| ATP synthase subunit B [Streptococcus pneumoniae SP-BS293] gi|302640679|gb|EFL71077.1| ATP synthase subunit B [Streptococcus pneumoniae BS458] gi|302643030|gb|EFL73323.1| ATP synthase subunit B [Streptococcus pneumoniae BS457] gi|302646273|gb|EFL76500.1| ATP synthase subunit B [Streptococcus pneumoniae BS397] gi|306409689|gb|ADM85116.1| F0F1-type ATP synthase, beta subunit [Streptococcus pneumoniae AP200] gi|332072299|gb|EGI82782.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA17570] gi|332200067|gb|EGJ14140.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA47368] gi|332200947|gb|EGJ15018.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA47901] Length = 468 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|15616316|ref|NP_244621.1| F0F1 ATP synthase subunit beta [Bacillus halodurans C-125] gi|14916533|sp|Q9K6H5|ATPB_BACHD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|10176378|dbj|BAB07473.1| ATP synthase beta subunit [Bacillus halodurans C-125] Length = 470 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID D+ + I + P + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGESIDLDEPIPADAERSPIHREAPKFEELSTKTEILETGIKVVDLLAPYI 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ + Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHE-MSDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R L+ +T+AEYF K G +VLL +D+I RF + E++ Sbjct: 209 KKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDKQGQDVLLFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + + G++T++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L+E G YP VDPLAS SR L+ + + + + + +++E +DI I Sbjct: 327 ATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYNVARQVQQTLQKYKELQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|149193991|ref|ZP_01871089.1| F0F1 ATP synthase subunit beta [Caminibacter mediatlanticus TB-2] gi|149135944|gb|EDM24422.1| F0F1 ATP synthase subunit beta [Caminibacter mediatlanticus TB-2] Length = 469 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 100/339 (29%), Positives = 175/339 (51%), Gaps = 11/339 (3%) Query: 64 RINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG 122 +I ++V + + + ++ G+ V G ++ GR+ N G ID + + Sbjct: 49 QIGDNVVRTIAMDLTDGLTRGEKVVATGAPIKVPVGEAVLGRIFNVTGDVIDEGEPI-PA 107 Query: 123 DLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 D+ + + PP Q + + F+TGI+V+D+ P G + G+F G+G+GK+ ++ Sbjct: 108 DVERWSIHRDPPPFEEQSTKMEIFETGIKVVDLLCPYMKGGKTGLFGGAGVGKTVIIMEL 167 Query: 182 ARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLT 237 + + + + VGER RE + + L K + +E P R +T Sbjct: 168 IHNVAYKHSGYSVFAGVGERTREGNDLYHEMKESGVLDKVALCYGQMNEPPGCRNRVAMT 227 Query: 238 AVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +T+AEYF + +VL+ +D+I RFA + E++ G +P A GY ++ +E+ RL ER Sbjct: 228 GLTMAEYFRDVENRDVLMFIDNIFRFAQAGAEMSALLGRIPSAVGYQPTLATEMGRLQER 287 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 I + +KG+IT++ +V V D+ DP SV + LD VLNR +AE+G YP VDPL S Sbjct: 288 I--TSTKKGSITSIQAVYVPADDLTDPAPASVFAHLDATTVLNRKIAEKGIYPAVDPLDS 345 Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 SR+ D + K+ + ++ ++++ +DI I G Sbjct: 346 TSRILDPQIVGERHYKVARGVQEVLQKYKDLQDIIAILG 384 >gi|15901355|ref|NP_345959.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae TIGR4] gi|15903403|ref|NP_358953.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae R6] gi|111657410|ref|ZP_01408163.1| hypothetical protein SpneT_02001380 [Streptococcus pneumoniae TIGR4] gi|116516544|ref|YP_816797.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae D39] gi|148984851|ref|ZP_01818104.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP3-BS71] gi|149007587|ref|ZP_01831222.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP18-BS74] gi|149021774|ref|ZP_01835781.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP23-BS72] gi|168487559|ref|ZP_02712067.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1087-00] gi|168575963|ref|ZP_02721878.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae MLV-016] gi|169833283|ref|YP_001694914.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae Hungary19A-6] gi|221232220|ref|YP_002511373.1| ATP synthase beta chain [Streptococcus pneumoniae ATCC 700669] gi|307127712|ref|YP_003879743.1| ATP synthase F1 subunit beta [Streptococcus pneumoniae 670-6B] gi|81588075|sp|Q8DP44|ATPB_STRR6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81854993|sp|Q97PT6|ATPB_STRPN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|122277705|sp|Q04HT9|ATPB_STRP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740682|sp|B1ICS9|ATPB_STRPI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808166|sp|B8ZLA9|ATPB_STRPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|14972998|gb|AAK75599.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae TIGR4] gi|15459007|gb|AAL00164.1| Proton-translocating ATPase, F1 sector, beta-subunit [Streptococcus pneumoniae R6] gi|116077120|gb|ABJ54840.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae D39] gi|147760946|gb|EDK67916.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP18-BS74] gi|147922873|gb|EDK73989.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP3-BS71] gi|147930010|gb|EDK80997.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae SP23-BS72] gi|168995785|gb|ACA36397.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae Hungary19A-6] gi|183569628|gb|EDT90156.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae CDC1087-00] gi|183578206|gb|EDT98734.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae MLV-016] gi|220674681|emb|CAR69254.1| ATP synthase beta chain [Streptococcus pneumoniae ATCC 700669] gi|301800344|emb|CBW32973.1| ATP synthase beta chain [Streptococcus pneumoniae OXC141] gi|306484774|gb|ADM91643.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae 670-6B] gi|332073842|gb|EGI84320.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA41301] gi|332074258|gb|EGI84735.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA17545] gi|332199551|gb|EGJ13626.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae GA41317] Length = 468 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|99081926|ref|YP_614080.1| F0F1 ATP synthase subunit beta [Ruegeria sp. TM1040] gi|118573747|sp|Q1GEU8|ATPB_SILST RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|99038206|gb|ABF64818.1| ATP synthase F1 beta subunit [Ruegeria sp. TM1040] Length = 474 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 105/312 (33%), Positives = 165/312 (52%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR++N +G+P+D G+ + K + + P N Q E TGI+VID+ P Sbjct: 84 ATLGRILNVVGEPVDEGEPIVAK---ETRAIHQPAPEFNDQSTESEVLVTGIKVIDLLAP 140 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED 208 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 141 YAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIES 198 Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFA 263 + DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF Sbjct: 199 NVIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFT 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VLNR+++E G YP VDPL S SRL D +E K+ S + ++ R Sbjct: 317 APATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEEHYKVASDVQQILQR 376 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 377 YKSLQDIIAILG 388 >gi|260432839|ref|ZP_05786810.1| ATP synthase F1, beta subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260416667|gb|EEX09926.1| ATP synthase F1, beta subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 474 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 165/311 (53%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR++N +G+PID + + + + P+ + Q E TGI+V+D+ P Sbjct: 84 ATLGRILNVVGEPIDEKGPVEASE--TRAIHQPAPSFDEQSTESEILVTGIKVVDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 142 AKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESN 199 Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264 + DNL +S V V +E P R LT +T+AE F + G +VL +D+I RF Sbjct: 200 VIKPDNLSESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQ 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP Sbjct: 260 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPA 317 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VLNR+++E+G YP VDPL S SRL D A + K+ + + ++ R+ Sbjct: 318 PATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLLDPAIVGERHYKVATDVQQILQRY 377 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 378 KSLQDIIAILG 388 >gi|195564346|ref|XP_002105781.1| ATPsyn-beta [Drosophila simulans] gi|194201657|gb|EDX15233.1| ATPsyn-beta [Drosophila simulans] Length = 439 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 164/314 (52%), Gaps = 17/314 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 RI A GR+IN +G+PID + D + I ++ P + ++ TGI+V+D Sbjct: 44 RIPVGAETLGRIINVIGEPIDERGPIDT-DKTAAIHAEAPEFVQMSVEQEILVTGIKVVD 102 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205 + P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 103 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNEM 161 Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I R Sbjct: 162 IEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 221 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 222 FTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLT 279 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ Sbjct: 280 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKIL 339 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 340 QDYKSLQDIIAILG 353 >gi|154338794|ref|XP_001565619.1| ATPase beta subunit [Leishmania braziliensis MHOM/BR/75/M2904] gi|134062671|emb|CAM39114.1| putative ATPase beta subunit [Leishmania braziliensis MHOM/BR/75/M2904] Length = 524 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 16/299 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID + + + M I ++ P ++ + TGI+VID+ P C G Sbjct: 121 GRIFNVLGDAIDHRGPVCE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 179 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L++ A+ V VGER RE + + + + Sbjct: 180 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 238 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K V+V +E P R +A+T+AEYF +G NVLL +D+I RF + E++ Sbjct: 239 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 298 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +L L ERI + KG+IT+V +V V D+ DP + S Sbjct: 299 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 356 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R++AE G YP V+PL SR+ D D + + ++ +++E +DI Sbjct: 357 LDATTVLDRAVAESGIYPAVNPLECASRIMDPDVIDVDHYNVAQDIVQMLTKYKELQDI 415 >gi|255280303|ref|ZP_05344858.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469] gi|255269394|gb|EET62599.1| ATP synthase F1, beta subunit [Bryantella formatexigens DSM 14469] Length = 463 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+PID ++ K + I P + + +TGI+V+D+ P G Sbjct: 89 LGRIFNVIGEPIDNKEA-PKDVQYLPIHRDAPDFEEQATSTEMLETGIKVVDLLCPYQKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ R+ + + + VGER RE + + + K+ Sbjct: 148 GKTGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMSESGVINKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 208 TMVFGQMNEPPGARMRVGLTGLTMAEYFRDEGGKDVLLFIDNIFRFTQAGSEVSALLGRM 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKHGSITSVQAVYVPADDLTDPAPATTFAHLDATT 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+ E G YP VDPL S SR+ D +E K+ + ++ +++E +DI I G Sbjct: 326 VLSRSIVELGIYPAVDPLESTSRILDPRIVGEEHYKVARGVQEILQKYKELQDIIAILG 384 >gi|94676869|ref|YP_588610.1| F0F1 ATP synthase subunit beta [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|118573508|sp|Q1LTV4|ATPB_BAUCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|94220019|gb|ABF14178.1| ATP synthase F1, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 457 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 112/355 (31%), Positives = 175/355 (49%), Gaps = 17/355 (4%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINA 108 V GKN L ++ IV +G+ E + G V G ++ R++N Sbjct: 32 VTNGKNKLILEVEQQLGSGIVRCIAMGVSEGLRRGLTVIDLGHAIKVPVGKSTLSRIMNV 91 Query: 109 LGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 LG+PID KG ++ E I P ++ +TGI+VID+ PL G + Sbjct: 92 LGEPIDM-----KGIINAEEHWSIHRSAPRYEELALSQEILETGIKVIDLMCPLVKGGKA 146 Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVV 220 G+F G+G+GK+ + R+ + + + VGER RE +F + N L K +V Sbjct: 147 GLFGGAGVGKTVNMMELIRNIAIEHAGYSVFTGVGERTREGNDFYHEMKDSNVLDKVSLV 206 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G +P A Sbjct: 207 YGQMNEPPGNRFRVALTGLTIAEKFRDEGHDVLLFIDNIYRYTLAGAEVSALLGRMPSAV 266 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GY ++ E+ L ERI + + G+IT++ +V V D+ DP + S LD IVL+R Sbjct: 267 GYQPTLSEEMGLLQERI--TSTKYGSITSIQAVYVPADDLTDPAPATTFSHLDATIVLSR 324 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +A G YP +DPL S SR D + V+ + ++ R++E +DI I G Sbjct: 325 QIASLGIYPAIDPLESTSRQLDPLVVGQKHYDVALGVQGILQRYQELKDIIAILG 379 >gi|78064765|ref|YP_367534.1| F0F1 ATP synthase subunit beta [Burkholderia sp. 383] gi|118573515|sp|Q39KX6|ATPB_BURS3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|77965510|gb|ABB06890.1| ATP synthase F1 subcomplex beta subunit [Burkholderia sp. 383] Length = 464 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESETTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382 >gi|257470711|ref|ZP_05634801.1| F0F1 ATP synthase subunit beta [Fusobacterium ulcerans ATCC 49185] gi|317064916|ref|ZP_07929401.1| ATP synthase subunit beta [Fusobacterium ulcerans ATCC 49185] gi|313690592|gb|EFS27427.1| ATP synthase subunit beta [Fusobacterium ulcerans ATCC 49185] Length = 466 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 164/307 (53%), Gaps = 9/307 (2%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ GR++N LG+P+D D + + + I P ++ + F+TGI+VID Sbjct: 77 KVPVGKAVLGRILNVLGQPVD-DGGPIETEEYLPIHRDAPSFEEQETETEIFETGIKVID 135 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL 210 + P G +IG+F G+G+GK+ L+ + +S+ VGER RE R+ ++ Sbjct: 136 LLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGERTREGRDLYDEMT 195 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268 L K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E Sbjct: 196 ESGVLSKTSLVYGQMNEPPGARLRVGLTGLTVAENFRDKEGQDVLLFIDNIFRFTQAGSE 255 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + Sbjct: 256 VSALLGRMPSAVGYQPNLATEMGTLQERI--TSTKSGSITSVQAVYVPADDLTDPAPATT 313 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387 S LD VL+R++A G YP VDPL S S+ L+ + + ++ + ++ R++E + Sbjct: 314 FSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSAEVVGKEHYEVAREVQEVLQRYKELQ 373 Query: 388 DIRLIGG 394 DI I G Sbjct: 374 DIIAILG 380 >gi|237739747|ref|ZP_04570228.1| ATP synthase subunit beta [Fusobacterium sp. 2_1_31] gi|262066569|ref|ZP_06026181.1| ATP synthase F1, beta subunit [Fusobacterium periodonticum ATCC 33693] gi|229423355|gb|EEO38402.1| ATP synthase subunit beta [Fusobacterium sp. 2_1_31] gi|291379704|gb|EFE87222.1| ATP synthase F1, beta subunit [Fusobacterium periodonticum ATCC 33693] Length = 462 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D + + + I + P + + + F+TGI+VID+ P Sbjct: 82 AVLGRILNVLGEPVDNQGPV-NAETVLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE R+ + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYNEMTESGVIT 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ G Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+R++A G YP VDPL S S+ L++ + ++ + ++ R++E +DI I Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDIVGKEHYEIARKVQEVLQRYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|325525633|gb|EGD03407.1| F0F1 ATP synthase subunit beta [Burkholderia sp. TJI49] Length = 459 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 84 GRIMDVLGRPIDEAGPI-ESETKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 142 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 377 >gi|119776776|ref|YP_929516.1| F0F1 ATP synthase subunit beta [Shewanella amazonensis SB2B] gi|166222412|sp|A1SBU0|ATPB_SHEAM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|119769276|gb|ABM01847.1| Sodium-transporting two-sector ATPase [Shewanella amazonensis SB2B] Length = 462 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 159/301 (52%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ D + I P + + +TGI+VID+ P Sbjct: 85 ATLGRIMNVLGEPVDEAGPIGEEDRYV-IHRAAPSYEEQSNTTELLETGIKVIDLVCPFA 143 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + + L Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMMESGVL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D E + + + +++ R++E +DI I Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQNVLQRYKELKDIIAIL 380 Query: 394 G 394 G Sbjct: 381 G 381 >gi|194770714|ref|XP_001967434.1| GF21882 [Drosophila ananassae] gi|190618410|gb|EDV33934.1| GF21882 [Drosophila ananassae] Length = 506 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P + ++ TGI+V+ Sbjct: 110 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAPIHAEAPEFVEMSVEQEILVTGIKVV 168 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 169 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 228 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 287 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 345 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 406 LQDYKSLQDIIAILG 420 >gi|104784434|ref|YP_610932.1| F0F1 ATP synthase subunit beta [Pseudomonas entomophila L48] gi|122985703|sp|Q1I2I7|ATPB_PSEE4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|95113421|emb|CAK18149.1| ATP synthase F1, beta subunit [Pseudomonas entomophila L48] Length = 458 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 102/332 (30%), Positives = 169/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G E + G D+V + GR+++ LG PID +G+ + Sbjct: 49 VVRTIAMGSTEGLKRGLDVVDTKAAISVPVGKATLGRIMDVLGNPIDEAGPIGEEE-RRG 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I K P + +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 108 IHRKAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 167 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + N L K +V +E P R LT +T+AE Sbjct: 168 EHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAE 227 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F +G++VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 228 KFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 +G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 286 EGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E + + +++ R++E +DI I G Sbjct: 346 NVIGNEHYETARQVQYVLQRYKELKDIIAILG 377 >gi|195134016|ref|XP_002011434.1| GI14045 [Drosophila mojavensis] gi|193912057|gb|EDW10924.1| GI14045 [Drosophila mojavensis] Length = 506 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P + ++ TGI+V+ Sbjct: 110 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVEMSVEQEILVTGIKVV 168 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 169 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 228 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 287 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 345 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 406 LQDYKSLQDIIAILG 420 >gi|189218851|ref|YP_001939492.1| F0F1 ATP synthase subunit beta [Methylacidiphilum infernorum V4] gi|189185709|gb|ACD82894.1| F0F1-type ATP synthase, beta subunit [Methylacidiphilum infernorum V4] Length = 484 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 168/311 (54%), Gaps = 12/311 (3%) Query: 87 VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144 V+ GR P S + GR++N G+P+DG + + + + I S PPA++ K Sbjct: 95 VYDTGRVVSIPVSKKYLGRLVNIFGEPLDGMEPV-EPEGYRSIFSD-PPALDTTLGPKSI 152 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 + GI+VID+ P G + G+F G+G+GK+ L+ F ++ +S+ VGER RE Sbjct: 153 LEIGIKVIDLLCPFVKGGKTGLFGGAGVGKTVLMMEFMKAVSLIHRGVSVFAGVGERIRE 212 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 E ++ + ++++ DESP +R LTA++ AE+F S +L ++D++ Sbjct: 213 GHELWKEMQKAGVMPQTLMAFGQMDESPGVRFRIGLTALSYAEFFRDSLQTEILFLMDNL 272 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P GY ++ +E+ L +RI + GNITAV +V V D+ Sbjct: 273 FRFVQAGSEVSGLLGRMPAMVGYQPTLLTEVAELQDRI--VSTKSGNITAVQAVYVPADD 330 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378 DP ++ S LD ++L+RS A +G YP +DPL S R+ DK + + ++S + Sbjct: 331 MTDPAVMAILSHLDTVVILSRSQAAKGFYPAIDPLVSTCRIMDKQFLGERHYTIASGVRK 390 Query: 379 LIHRFEETRDI 389 + R++E DI Sbjct: 391 YLSRYKELEDI 401 >gi|254250972|ref|ZP_04944290.1| Vacuolar ATP synthase catalytic subunit [Burkholderia dolosa AUO158] gi|124893581|gb|EAY67461.1| Vacuolar ATP synthase catalytic subunit [Burkholderia dolosa AUO158] Length = 464 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESETKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382 >gi|1304067|dbj|BAA12667.1| proton ATPase beta subunit [Desulfovibrio vulgaris] gi|5811568|dbj|BAA83613.1| F1F0-ATPase beta subunit [Desulfovibrio vulgaris] Length = 471 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + K D + I P + + +TGI+V+D+ PL Sbjct: 89 ASLGRIMNVVGRPVDEMGPI-KTDKYLPIHRPAPEFTEQNTKVELLETGIKVVDLLIPLG 147 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ +L + IS+ VGER RE + + L+ Sbjct: 148 KGGKMGLFGGAGVGKTVILMEMINNIAKQHGAISVFAGVGERTREGNDLYHEMKDAGVLE 207 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+ ++ +E P R LTA+ AEYF + +VLL +D+I RF + E++ G Sbjct: 208 KAALIYGQMNEPPGARARVALTALACAEYFRDIENQDVLLFVDNIFRFTQAGSEVSALLG 267 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + S LDG Sbjct: 268 RMPSAVGYQPTLGTDLGGLQERI--TSTVKGSITSVQAVYVPADDLTDPAPATTFSHLDG 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP VDPL S SR+ D E V+ ++ ++ ++++ +DI I Sbjct: 326 TLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGPEHYSVARAVQQVLQKYKDLQDIIAIL 385 Query: 394 G 394 G Sbjct: 386 G 386 >gi|298346228|ref|YP_003718915.1| F0F1 ATP synthase subunit beta [Mobiluncus curtisii ATCC 43063] gi|304390009|ref|ZP_07371963.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654812|ref|ZP_07907717.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii ATCC 51333] gi|315657265|ref|ZP_07910147.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298236289|gb|ADI67421.1| F0F1 ATP synthase subunit beta [Mobiluncus curtisii ATCC 43063] gi|304326491|gb|EFL93735.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315490773|gb|EFU80393.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii ATCC 51333] gi|315491737|gb|EFU81346.1| ATP synthase F1 sector beta subunit [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 481 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 167/304 (54%), Gaps = 19/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156 G V N +G+ ++ L +G+ ++E+ + + PPA ++ + + F+TGI+VID+ T Sbjct: 100 GHVFNVIGECLN----LKEGE-TLEVKDRWSIHRTPPAFDKLESKTQMFETGIKVIDLLT 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + D +S+ VGER RE + I + Sbjct: 155 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIHEMADAG 214 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 L K+ +V DE P R L+ +T+AEYF + +VLL +D+I RF + E++T Sbjct: 215 VLDKTAMVFGQMDEPPGTRLRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVST 274 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + Sbjct: 275 LLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHSITSLQAIYVPADDYTDPAPATTFAH 332 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPLAS SR+ D + E ++ + + ++ + +E +DI Sbjct: 333 LDATTNLSRDIASRGLYPAVDPLASTSRILDPRYVGKEHYEVATQVKQILQKNKELQDII 392 Query: 391 LIGG 394 I G Sbjct: 393 AILG 396 >gi|229816334|ref|ZP_04446641.1| hypothetical protein COLINT_03384 [Collinsella intestinalis DSM 13280] gi|229808090|gb|EEP43885.1| hypothetical protein COLINT_03384 [Collinsella intestinalis DSM 13280] Length = 477 Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 157/297 (52%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+P+DG D + + D I P + F+TGI+ +D+ P G Sbjct: 101 GRIWNVMGQPVDGKD-MPEVDAWYPIHHPAPSFDQLTTKTEIFETGIKAVDLLEPYIRGG 159 Query: 163 RIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ L+ + + + + VGER RE + ++E + K+ Sbjct: 160 KTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMSESGVIDKTC 219 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R L +T AEYF +G +VLL +D+I RF+ + E++ G +P Sbjct: 220 LVYGQMNEPPGARLRIGLAGLTEAEYFRDRGQDVLLFIDNIFRFSQAGSEVSALLGRMPS 279 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD VL Sbjct: 280 AVGYQPTLATEMGDLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDATTVL 337 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +RS+AE G YP +DPLAS S D A +E V+ + L+ + + +DI I G Sbjct: 338 SRSIAELGLYPAIDPLASSSDALDPAIVGEEHYRVAVKVQELLQEYSDLQDIIAILG 394 >gi|322372413|ref|ZP_08046949.1| ATP synthase F1, beta subunit [Streptococcus sp. C150] gi|321277455|gb|EFX54524.1| ATP synthase F1, beta subunit [Streptococcus sp. C150] Length = 468 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|114706547|ref|ZP_01439448.1| ATP synthase subunit B [Fulvimarina pelagi HTCC2506] gi|114537939|gb|EAU41062.1| ATP synthase subunit B [Fulvimarina pelagi HTCC2506] Length = 484 Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 95/319 (29%), Positives = 163/319 (51%), Gaps = 20/319 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ GR++N +G+PID + + + I P +++ + TGI+VI Sbjct: 83 IRVPVGDATLGRILNVIGEPIDEVGPVNSNE-TRAIHQSAPDYIDQSPESQILVTGIKVI 141 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ TP G +IG+F G+G+GK+ L+ + + + VGER RE + + Sbjct: 142 DLLTPYARGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEM 201 Query: 210 L--GDNL-----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 + G N+ K+ +V +E P R LT +TIAE+F G +VL + Sbjct: 202 IESGVNVDPHKNDGSAEGSKAALVFGQMNEPPGARARVALTGLTIAEHFRDAGQDVLFFV 261 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ ++ ERI + KG+IT+V ++ V Sbjct: 262 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSVQAIYVP 319 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375 D+ DP + + LD VLNRS++E+G YP VDPL S SR+ +E ++ Sbjct: 320 ADDLTDPAPATTFTHLDATTVLNRSISEKGIYPAVDPLDSTSRMLQPMIVGEEHYQVARE 379 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ +++ +DI I G Sbjct: 380 VQEILQKYKSLQDIIAILG 398 >gi|34499996|gb|AAQ73580.1| ATP synthase beta subunit [Volucribacter psittacicida] Length = 444 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + S I P + + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEKGEIG-AEESWSIHRAPPSYVEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPDDDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|153853572|ref|ZP_01994952.1| hypothetical protein DORLON_00942 [Dorea longicatena DSM 13814] gi|149753727|gb|EDM63658.1| hypothetical protein DORLON_00942 [Dorea longicatena DSM 13814] Length = 465 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ ID + + K I K P + + +TGI+VID+ TP G Sbjct: 87 GRLFNVLGETIDNGEPI-KDSEEWVIHRKAPSFEEQSPAVEVLETGIKVIDLLTPYAKGG 145 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ + + I + VGER RE + + E L K+ Sbjct: 146 KIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWTEMRESGVLDKTA 205 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G +P Sbjct: 206 LVFGQMNEPPGSRMRVAETGLTMAEYFRDVEHQNVLLFIDNIFRFVQAGSEVSALLGRMP 265 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + S LD V Sbjct: 266 SAVGYQPTLANEMGALQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFSHLDATTV 323 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R + E+G YP VDPL S SR+ + A +E ++ + ++ +++E +DI I G Sbjct: 324 LSRKIVEQGIYPAVDPLDSTSRILEPAVVGEEHYQVARKVQEILQKYKELQDIIAILG 381 >gi|307709043|ref|ZP_07645503.1| ATP synthase F1, beta subunit [Streptococcus mitis SK564] gi|307620379|gb|EFN99495.1| ATP synthase F1, beta subunit [Streptococcus mitis SK564] Length = 468 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|167587928|ref|ZP_02380316.1| F0F1 ATP synthase subunit beta [Burkholderia ubonensis Bu] Length = 459 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + + I K P + +TGI+VID+ P G Sbjct: 84 GRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 142 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E ++ + + R++E RDI I G Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRRVQQTLQRYKELRDIIAILG 377 >gi|134294238|ref|YP_001117973.1| F0F1 ATP synthase subunit beta [Burkholderia vietnamiensis G4] gi|166201695|sp|A4JA35|ATPB_BURVG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134137395|gb|ABO53138.1| ATP synthase F1 subcomplex beta subunit [Burkholderia vietnamiensis G4] Length = 464 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E ++ + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRRVQQTLQRYKELRDIIAILG 382 >gi|253582462|ref|ZP_04859684.1| F-type two-sector ATPase [Fusobacterium varium ATCC 27725] gi|251835607|gb|EES64146.1| F-type two-sector ATPase [Fusobacterium varium ATCC 27725] Length = 466 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 163/307 (53%), Gaps = 9/307 (2%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ GR++N LG+P+D + + + I P ++ + F+TGI+VID Sbjct: 77 KVPVGKAVLGRILNVLGQPVDDGGPIETEEF-LPIHRDAPSFEEQETETEIFETGIKVID 135 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL 210 + P G +IG+F G+G+GK+ L+ + +S+ VGER RE R+ ++ Sbjct: 136 LLAPYIKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGERTREGRDLYDEMT 195 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268 L K+ +V +E P R LT +TIAE F K G +VLL +D+I RF + E Sbjct: 196 ESGVLSKTSLVYGQMNEPPGARLRVGLTGLTIAENFRDKEGQDVLLFIDNIFRFTQAGSE 255 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + Sbjct: 256 VSALLGRMPSAVGYQPNLATEMGTLQERI--TSTKSGSITSVQAVYVPADDLTDPAPATT 313 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387 S LD VL+R++A G YP VDPL S S+ L+ + + ++ + ++ R++E + Sbjct: 314 FSHLDATTVLSRNIASLGIYPAVDPLDSTSKALSAEIVGKEHYEVAREVQEVLQRYKELQ 373 Query: 388 DIRLIGG 394 DI I G Sbjct: 374 DIIAILG 380 >gi|161523286|ref|YP_001578298.1| F0F1 ATP synthase subunit beta [Burkholderia multivorans ATCC 17616] gi|189351941|ref|YP_001947569.1| F0F1 ATP synthase subunit beta [Burkholderia multivorans ATCC 17616] gi|221202177|ref|ZP_03575212.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2M] gi|221208762|ref|ZP_03581761.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2] gi|221214288|ref|ZP_03587260.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD1] gi|226740175|sp|A9AJG4|ATPB_BURM1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|160340715|gb|ABX13801.1| ATP synthase F1, beta subunit [Burkholderia multivorans ATCC 17616] gi|189335963|dbj|BAG45033.1| F-type H+-transporting ATPase beta chain [Burkholderia multivorans ATCC 17616] gi|221165943|gb|EED98417.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD1] gi|221171394|gb|EEE03842.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2] gi|221177971|gb|EEE10383.1| ATP synthase F1, beta subunit [Burkholderia multivorans CGD2M] Length = 464 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESETKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382 >gi|51891229|ref|YP_073920.1| F0F1 ATP synthase subunit beta [Symbiobacterium thermophilum IAM 14863] gi|81826265|sp|Q67TB7|ATPB_SYMTH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|51854918|dbj|BAD39076.1| ATP synthase beta subunit [Symbiobacterium thermophilum IAM 14863] Length = 472 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ IDG + +S+ I + P N + TGI+VID+ P G Sbjct: 91 LGRIFNVLGETIDGKGPV-NSPVSLPIHREPPGVANVDPATEMLPTGIKVIDLLCPYARG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVREFIEDYL-GDNLKKS 217 +IG+F G+G+GK+ ++ + + I + VGER RE + + + + K Sbjct: 150 GKIGLFGGAGVGKTVMIQELIHNIAYKFGGYSIFAGVGERTREGNDLYHEMIEAGVIDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGLDVLLFIDNIFRFTQAGSEVSALLGRM 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 270 PSAVGYQPTLATEMGYLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++ E+ +P VDPL S SR+ D E ++ + ++ R++E +DI I G Sbjct: 328 VLSRAVFEKAIFPAVDPLDSTSRILDPNIVGREHYEVARGVQKVLQRYKELQDIIAILG 386 >gi|308175409|ref|YP_003922114.1| ATP synthase subunit beta, component F1 [Bacillus amyloliquefaciens DSM 7] gi|307608273|emb|CBI44644.1| ATP synthase (subunit beta, component F1) [Bacillus amyloliquefaciens DSM 7] gi|328555387|gb|AEB25879.1| F0F1 ATP synthase subunit beta [Bacillus amyloliquefaciens TA208] gi|328913758|gb|AEB65354.1| ATP synthase (subunit beta, component F1) [Bacillus amyloliquefaciens LL3] Length = 473 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 160/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG ID ++ L D + + + P+ ++ E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGDKIDLNEPL-PADAQKDPIHRSAPSFDQLSTEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + F E + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R LT +T+AE+F K G +VL +D+I RF + E++ Sbjct: 209 KKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDKQGQDVLFFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR LA + + + + + R++E +DI I Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|307253313|ref|ZP_07535185.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307264334|ref|ZP_07545922.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|306859177|gb|EFM91218.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306870286|gb|EFN02042.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 467 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + +I P + + +TGI+VID+ P G Sbjct: 92 LGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 151 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 211 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 270 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 271 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 328 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 329 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 386 >gi|287945|emb|CAA50332.1| ATP synthase beta subunit [Drosophila melanogaster] Length = 500 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P + ++ TGI+V+ Sbjct: 104 IRIPVGAETLGRIINVIGEPIDERGPIDT-DKTAAIHAEAPEFVQMSVEQEILVTGIKVV 162 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 163 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 221 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 222 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 281 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 282 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 339 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 340 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 399 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 400 LQDYKSLQDIIAILG 414 >gi|307701971|ref|ZP_07638979.1| ATP synthase F1, beta subunit [Streptococcus mitis NCTC 12261] gi|307705146|ref|ZP_07642022.1| ATP synthase F1, beta subunit [Streptococcus mitis SK597] gi|307706796|ref|ZP_07643601.1| ATP synthase F1, beta subunit [Streptococcus mitis SK321] gi|322376875|ref|ZP_08051368.1| ATP synthase F1, beta subunit [Streptococcus sp. M334] gi|307616616|gb|EFN95805.1| ATP synthase F1, beta subunit [Streptococcus mitis NCTC 12261] gi|307617881|gb|EFN97043.1| ATP synthase F1, beta subunit [Streptococcus mitis SK321] gi|307621307|gb|EFO00368.1| ATP synthase F1, beta subunit [Streptococcus mitis SK597] gi|321282682|gb|EFX59689.1| ATP synthase F1, beta subunit [Streptococcus sp. M334] Length = 468 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|295107520|emb|CBL05063.1| ATP synthase F1 subcomplex beta subunit [Gordonibacter pamelaeae 7-10-1-b] Length = 482 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 155/297 (52%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+P+DG + M I P + F+TGI+V+D+ P G Sbjct: 101 GRIWNVIGEPVDGKPMPEVAEW-MPIHHPAPDYDTLTTTTEIFETGIKVVDLIEPYVKGG 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ ++ + + + + VGER RE + F+E + K+ Sbjct: 160 KTGLFGGAGVGKTVIIQELINNLAQEHGGTSVFTGVGERTREGTDLFLEMSESGVIDKTC 219 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R L +T AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 220 LVYGQMNEPPGARLRVGLAGLTEAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 279 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ L ERI + E G+IT+V +V V D+ DP + + LD VL Sbjct: 280 AVGYQPTLATEMGDLQERI--TSTETGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 337 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +RS+AE G YP VDPL S SR D +E V+ + ++ +++ +DI I G Sbjct: 338 SRSIAELGIYPAVDPLESTSRALDPEIVGEEHYRVAVGVQEVLQNYKDLQDIIAILG 394 >gi|289168148|ref|YP_003446417.1| proton-translocating ATPase, F1 sector, beta-subunit [Streptococcus mitis B6] gi|288907715|emb|CBJ22552.1| proton-translocating ATPase, F1 sector, beta-subunit [Streptococcus mitis B6] Length = 468 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|116334911|ref|YP_802406.1| F0F1 ATP synthase subunit beta [Candidatus Carsonella ruddii PV] gi|123126215|sp|Q05FY1|ATPB_CARRP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116235192|dbj|BAF35040.1| F0F1-type ATP synthase beta subunit [Candidatus Carsonella ruddii PV] Length = 447 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 156/301 (51%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 C GR++N LG PID + + + + PP + Q +TGI+VID+ P Sbjct: 80 CTLGRILNVLGNPIDNNGEIISN--KKKPIHCSPPKFSDQVFSNNILETGIKVIDLLCPF 137 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ + R+ + S+ VGER RE +F + N L Sbjct: 138 LRGGKIGLFGGAGVGKTINMMELIRNIAIEHKGCSVFIGVGERTREGNDFYYEMKESNVL 197 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K ++ +E R LT ++IAE F G +VLL +D+I RF + EI+ G Sbjct: 198 DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFREMGKDVLLFIDNIYRFTLAGTEISALLG 257 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI S + G+IT+V ++ V D+ DP + + LD Sbjct: 258 RMPSAVGYQPTLAEEMGKLQERI--SSTKNGSITSVQAIYVPADDLTDPSPSTTFTHLDS 315 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 IVL+R +AE G YP +DPL S S+ D E ++ +S+ + +++E +D I Sbjct: 316 TIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGIEHYEIANSVKFYLQKYKELKDTIAIL 375 Query: 394 G 394 G Sbjct: 376 G 376 >gi|289550281|ref|YP_003471185.1| ATP synthase beta chain [Staphylococcus lugdunensis HKU09-01] gi|315660259|ref|ZP_07913114.1| ATP synthase F1 sector beta subunit [Staphylococcus lugdunensis M23590] gi|289179813|gb|ADC87058.1| ATP synthase beta chain [Staphylococcus lugdunensis HKU09-01] gi|315494686|gb|EFU83026.1| ATP synthase F1 sector beta subunit [Staphylococcus lugdunensis M23590] Length = 470 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 164/301 (54%), Gaps = 12/301 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID ++ L + + + ++ P + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGESIDLEEKLDDS-VRRDPIHRLAPKFDELSTEVEILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LK 215 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ +K Sbjct: 148 GGKVGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVIK 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L+A+T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 207 KTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLDS 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 L R L E G YP VDPLAS SR + + E V+ + + ++ E +DI I Sbjct: 325 TTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYDVARQVQSTLQKYRELQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|253987519|ref|YP_003038875.1| F0F1 ATP synthase subunit beta [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253778969|emb|CAQ82129.1| membrane-bound ATP synthase F1 sector beta-subunit [Photorhabdus asymbiotica] Length = 460 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P ++ +TGI+V+D+ Sbjct: 83 ATLGRIMNVLGEPIDM-----KGDIGEEERWPIHRPAPSYEELSNSQELLETGIKVMDLI 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|194397468|ref|YP_002038137.1| F0F1 ATP synthase subunit beta [Streptococcus pneumoniae G54] gi|226740681|sp|B5E670|ATPB_STRP4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|194357135|gb|ACF55583.1| ATP synthase F1, beta subunit [Streptococcus pneumoniae G54] Length = 468 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|34500006|gb|AAQ73585.1| ATP synthase beta subunit [Pasteurella aerogenes] Length = 444 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G D + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEKGPIGAED-AWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R PLT +T+AE F +G +VL +D+I R+ ++ E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVPLTGLTMAEKFRDEGRDVLFFVDNIYRYTLAVTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP V P+ SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVGPIRFTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|34500002|gb|AAQ73583.1| ATP synthase beta subunit [Bibersteinia trehalosi] Length = 444 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + + I P + + +TGI+VID+ P Sbjct: 80 ATLGRIMNVLGEPIDEAGPIGEEE-AWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFA 138 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + S+ VGER RE +F + N L Sbjct: 139 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHRVYSVFAGVGERTREGNDFYHEMKDSNVLD 198 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 199 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 258 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 259 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDST 316 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 317 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQDTLQRYKELKDIIAILG 376 >gi|322835102|ref|YP_004215129.1| ATP synthase F1 subunit beta [Rahnella sp. Y9602] gi|321170303|gb|ADW76002.1| ATP synthase F1, beta subunit [Rahnella sp. Y9602] Length = 460 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID ++G+ + I P ++ +TGI+V+D+ P Sbjct: 83 ATLGRIMNVLGEPIDMKGAIGEEE-RRAIHRAAPSYEELANSQELLETGIKVMDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|78356032|ref|YP_387481.1| F0F1 ATP synthase subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|118573527|sp|Q313W0|ATPB_DESDG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|78218437|gb|ABB37786.1| ATP synthase F1 subcomplex beta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 470 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 162/304 (53%), Gaps = 13/304 (4%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVE-KGFKTGIRVIDIFT 156 + GR++N +G+P+D +G D + + P P N Q + +TGI+V+D+ Sbjct: 87 SASLGRIMNVVGRPVD---EMGDIDAAKSLPIHRPAPEFNEQNTNVELLETGIKVVDLLI 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G ++G+F G+G+GK+ +L + IS+ VGER RE + + Sbjct: 144 PFPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAG 203 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 L+K+ +V +E P R LTA+ AEYF + +VLL +D+I RF + E++ Sbjct: 204 VLEKAALVYGQMNEPPGARARVALTALACAEYFRDEENQDVLLFVDNIFRFTQAGSEVSA 263 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + S Sbjct: 264 LLGRMPSAVGYQPTLGTDLGGLQERI--TSTTKGSITSVQAVYVPADDLTDPAPATTFSH 321 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIR 390 LDG +VL+R +AE G YP VDPL S SR+ D A+ + + ++ ++++ +DI Sbjct: 322 LDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGAEHYSVAREVQMVLQKYKDLQDII 381 Query: 391 LIGG 394 I G Sbjct: 382 AILG 385 >gi|187920253|ref|YP_001889284.1| F0F1 ATP synthase subunit beta [Burkholderia phytofirmans PsJN] gi|187718691|gb|ACD19914.1| ATP synthase F1, beta subunit [Burkholderia phytofirmans PsJN] Length = 492 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 153/295 (51%), Gaps = 12/295 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ G P D +L I PP + F TGI+VID+ PL G Sbjct: 102 GRLLDVTGSPRDDGAALSAQLERRPIHRAAPPLAAQTGATSLFSTGIKVIDLLAPLAQGG 161 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 + +F G+G+GK+ L+ +M R + + VGER RE E + D L + Sbjct: 162 KAAMFGGAGVGKTVLVMELIHAMVERYKGIS--VFAGVGERSREGHEMLLDMRTSGVLAR 219 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +E P R P TA+TIAEYF + NVLL++D++ RF + E++ G Sbjct: 220 TVLVYGQMNEPPGARWRVPFTALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGR 279 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P GY ++ SE+ L ERI ++TA+ +V V D+ DP ++ + +D Sbjct: 280 MPSRVGYQPTLASEVASLQERI--VSVGDVSVTAIEAVYVPADDFTDPAVTAIAAHIDSM 337 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 +VL+R++A EG YP +DP+AS S L D +E V++ + +I + E +D+ Sbjct: 338 VVLSRAMAAEGMYPAIDPIASSSILLDPLVVGEEHVAVATEVRRIIEHYRELQDV 392 >gi|327441428|dbj|BAK17793.1| F0F1-type ATP synthase, beta subunit [Solibacillus silvestris StLB046] Length = 471 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 169/330 (51%), Gaps = 15/330 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID + + I + P + +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGEVIDLGEEIPAEVRRDSIHREAPTFDELSTTVEILETGIKVVDLLAPYI 147 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + F E +K Sbjct: 148 KGGKIGLFGGAGVGKTVLIQELINNIAQEHAGISVFAGVGERTREGNDLFFEMTDSGVIK 207 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ +V +E P R LT +T+AE+F +G +VLL +D+I RF + E++ G Sbjct: 208 QTAMVFGQMNEPPGARMRVALTGLTMAEFFRDEQGADVLLFIDNIFRFTQAGSEVSALLG 267 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + KG++T++ ++ V D++ DP + + LD Sbjct: 268 RMPSAVGYQPTLATEMGKLQERI--TSTTKGSVTSIQAIYVPADDYTDPAPATTFAHLDA 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR L+ + + + + + I R+ E +DI I Sbjct: 326 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGPEHYAIATGVQRTIQRYRELQDIIAI- 384 Query: 394 GYRPGVDLILD---KAVHQVPIIYDFLKQS 420 G+D + D K V + I FL Q+ Sbjct: 385 ---LGMDELGDEDKKTVERARRIQFFLSQN 411 >gi|21675043|ref|NP_663108.1| F0F1 ATP synthase subunit beta [Chlorobium tepidum TLS] gi|25452812|sp|Q8KAC9|ATPB2_CHLTE RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|21648279|gb|AAM73450.1| ATP synthase F1, beta subunit [Chlorobium tepidum TLS] Length = 462 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 94/299 (31%), Positives = 157/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G PIDG + + I P + F+TGI+VID+ P G Sbjct: 86 LGRMLNVVGDPIDGKGPV-PAKKTYSIHRAAPKFDELSTKTEMFETGIKVIDLLEPYSRG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ + + + + VGER RE + + + + K+ Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT ++IAEYF +G +VLL +D+I RF + E++ G + Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFREEEGRDVLLFIDNIFRFTQAGSEVSALLGRM 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L +RI + +KG++T+V ++ V D+ DP + + LD Sbjct: 265 PSAVGYQPTLSTEMGELQDRI--TSTKKGSVTSVQAIYVPADDLTDPAPATAFTHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D D+ ++ ++ R+++ +DI I G Sbjct: 323 VLSRQIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAILG 381 >gi|34763442|ref|ZP_00144389.1| ATP synthase beta chain, sodium ion specific [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237742368|ref|ZP_04572849.1| ATP synthase subunit beta [Fusobacterium sp. 4_1_13] gi|256845696|ref|ZP_05551154.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_36A2] gi|294785057|ref|ZP_06750345.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_27] gi|27886883|gb|EAA24008.1| ATP synthase beta chain, sodium ion specific [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430016|gb|EEO40228.1| ATP synthase subunit beta [Fusobacterium sp. 4_1_13] gi|256719255|gb|EEU32810.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_36A2] gi|294486771|gb|EFG34133.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_27] Length = 462 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D + + + I + P + + + F+TGI+VID+ P Sbjct: 82 AVLGRILNVLGEPVDNQGPI-NAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE R+ + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVIT 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ G Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+R++A G YP VDPL S S+ L++ + ++ + ++ R++E +DI I Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARKVQEVLQRYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|330718988|ref|ZP_08313588.1| F0F1 ATP synthase subunit beta [Leuconostoc fallax KCTC 3537] Length = 466 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 94/296 (31%), Positives = 152/296 (51%), Gaps = 8/296 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG P+D + G I + P + +TGI+VID+ P Sbjct: 85 ATLGRVFNVLGNPVDNAGDIDAGVKRNPIHREAPQYDELTTSTEILETGIKVIDLLAPYV 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + L Sbjct: 145 RGGKIGLFGGAGVGKTVLIQELIHNIAQGHNGISVFTGVGERTREGNDMYHEMKESGVLA 204 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ +V +E P R LT +T+AE F ++G +VLL +D+I RF + E++ G Sbjct: 205 QTAMVYGQMNEPPGARMRVALTGLTMAENFRDNEGKDVLLFIDNIFRFTQAGSEVSALLG 264 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ +V V D++ DP + + LD Sbjct: 265 RIPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAVYVPADDYTDPAPATTFAHLDA 322 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L R+L ++G YP VDPLAS S D E ++ + + + R+ E +DI Sbjct: 323 TTNLERALTQQGIYPAVDPLASTSSALDPQIVGQEHYEVATEVQRTLQRYRELQDI 378 >gi|116512623|ref|YP_811530.1| F0F1 ATP synthase subunit beta [Lactococcus lactis subsp. cremoris SK11] gi|123125393|sp|Q02XA5|ATPB_LACLS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116108277|gb|ABJ73417.1| ATP synthase F1 subcomplex beta subunit [Lactococcus lactis subsp. cremoris SK11] Length = 469 Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG IDG + I K P + TGI+V+D+ P G Sbjct: 90 LGRVFNVLGDVIDGGEDFPADAERNPIHKKAPTFDELSTANEVLVTGIKVVDLLAPYLKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 150 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 210 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSALLGRM 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 270 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDATT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V+ + ++ R++E +DI I G Sbjct: 328 NLERRLTQMGIYPAVDPLASSSRAITPEIVGEEHYEVAMEVQRVLQRYKELQDIIAILG 386 >gi|257438169|ref|ZP_05613924.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165] gi|257199368|gb|EEU97652.1| ATP synthase F1, beta subunit [Faecalibacterium prausnitzii A2-165] Length = 464 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 158/305 (51%), Gaps = 10/305 (3%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GRV N LG+P+D + + I P +Q + +TGI+V+D+ Sbjct: 82 PVGDQCLGRVFNLLGEPVD-NKPAPTPEAYWPIHRPAPSYEEQQSTTEILETGIKVVDLI 140 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + + + + VGER RE + + Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIQELIYNIATEHNGYSVFTGVGERTREGNDLYGEMTES 200 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + K+ +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ Sbjct: 201 GVINKTALVYGQMNEPPGARMRVALSGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLATEMGALQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFT 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R +A +G YP VDPL S SR L+ + + ++ + ++ R++E +DI Sbjct: 319 HLDATTVLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYEIARDVQKVLQRYKELQDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAIMG 383 >gi|112791386|gb|ABI21963.1| ATP synthase beta subunit [Samsonia erythrinae] Length = 421 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+P+D KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPVDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|254302779|ref|ZP_04970137.1| F-type two-sector ATPase, F(1) beta subunit [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322971|gb|EDK88221.1| F-type two-sector ATPase, F(1) beta subunit [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 462 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D + + + I + P + + + F+TGI+VID+ P Sbjct: 82 AVLGRILNVLGEPVDNQGPI-NAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE R+ + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVIT 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ G Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+R++A G YP VDPL S S+ L++ + ++ + ++ R++E +DI I Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDVVGKEHYEVARKVQEVLQRYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|284007073|emb|CBA72348.1| F0F1 ATP synthase subunit beta [Arsenophonus nasoniae] Length = 460 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG PID +G+ + I P + + +TGI+V+D+ P Sbjct: 83 ATLGRIMNVLGDPIDMKGEIGEEE-RWAIHRAAPSYEDLSNSTELLETGIKVMDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTIAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKAGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|257462636|ref|ZP_05627046.1| F0F1 ATP synthase subunit beta [Fusobacterium sp. D12] gi|317060283|ref|ZP_07924768.1| ATP synthase subunit beta [Fusobacterium sp. D12] gi|313685959|gb|EFS22794.1| ATP synthase subunit beta [Fusobacterium sp. D12] Length = 465 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 17/305 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+P+D KG + E I + P ++ V + F+TGI+VID+ Sbjct: 82 AVLGRILNVLGEPVDE-----KGPIETEEYLPIHREAPKFEEQETVTEIFETGIKVIDLL 136 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G + G+F G+G+GK+ L+ + IS+ VGER RE R+ + Sbjct: 137 APYIKGGKTGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYNEMTES 196 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270 L K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ Sbjct: 197 GVLNKTSLVYGQMNEPPGARLRVALTGLTVAENFRDKEGQDVLLFIDNIFRFTQAGSEVS 256 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S Sbjct: 257 ALLGRIPSAVGYQPNLATEMGSLQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFS 314 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R +A G YP VDPL S S+ L+ + + ++ + ++ R+ E +DI Sbjct: 315 HLDATTVLSRDIAALGIYPAVDPLDSTSKALSPEVVGREHYEVAREVQRVLQRYTELQDI 374 Query: 390 RLIGG 394 I G Sbjct: 375 IAILG 379 >gi|167840619|ref|ZP_02467303.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis MSMB43] Length = 366 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 91/265 (34%), Positives = 143/265 (53%), Gaps = 12/265 (4%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCF 187 PP ++ F TGI+VID+ PL G + +F G+G+GK+ L+ +M R Sbjct: 11 PPLAEQKSATALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGI 70 Query: 188 DKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF- 245 + + +GER RE E + D G L ++V+V +E P R PLTA+ IAEYF Sbjct: 71 S--VFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFR 128 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 + NVLL++D++ RF + E++ G LP GY ++ SE+ L ERI + E Sbjct: 129 DERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--ASVEGA 186 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +TA+ +V V D+ DP ++ + +D +VL+R++A EG YP +DP+AS S L D Sbjct: 187 AVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLV 246 Query: 366 SADEKKLVS-SLTHLIHRFEETRDI 389 D V+ + +I + E +D+ Sbjct: 247 VGDGHVEVAIEVRRVIEHYRELQDV 271 >gi|258544335|ref|ZP_05704569.1| ATP synthase F1 sector subunit beta [Cardiobacterium hominis ATCC 15826] gi|258520415|gb|EEV89274.1| ATP synthase F1 sector subunit beta [Cardiobacterium hominis ATCC 15826] Length = 459 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LGK ID + + + I K P + +TGI+VID+ P Sbjct: 81 ATLGRIMNVLGKEIDHGPKI-EAEAYWGIHRKAPAYDELANSTELLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYYEMKESNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E R LT +T+AEYF +G +VL +D+I R+ + E++ G Sbjct: 200 KVSLVYGQMNEPAGNRFRVALTGLTMAEYFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 260 MPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +AE G YP VDPL S SR D DE + + ++ R++E RDI I G Sbjct: 318 VVLSRQIAELGIYPAVDPLDSTSRQLDPLVIGDEHYETARRVQGVLQRYKELRDIIAILG 377 >gi|205375345|ref|ZP_03228135.1| F0F1 ATP synthase subunit beta [Bacillus coahuilensis m4-4] Length = 470 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 102/330 (30%), Positives = 167/330 (50%), Gaps = 15/330 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID D + G I P + +TGI+V+D+ P Sbjct: 87 VTLGRVFNVLGETIDLDAPIEAGARRDPIHRTAPKFDQLSTETEILETGIKVVDLLAPYI 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + +K Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGLSVFAGVGERTREGNDLFHEMTDSGVIK 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 207 KTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +++ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 267 RMPSAVGYQPTLATDMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR L+ + + + + + R++E +DI I Sbjct: 325 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSIARQVQSTLQRYKELQDIIAI- 383 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D VH+ + FL Q+ Sbjct: 384 ---LGMDELSDDDKLVVHRARRVQFFLSQN 410 >gi|53804131|ref|YP_114011.1| F0F1 ATP synthase subunit beta [Methylococcus capsulatus str. Bath] gi|53757892|gb|AAU92183.1| ATP synthase F1, beta subunit [Methylococcus capsulatus str. Bath] Length = 458 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 121/398 (30%), Positives = 188/398 (47%), Gaps = 29/398 (7%) Query: 1 MQKNLETLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLG 60 MQ+ + +AE + +V+ + + Y+ Y+ F VHQ Sbjct: 1 MQERAPVIGSIAEVHGPVVVIACQTLPPLRQALYSRIDHETYL----FEVHQ-------- 48 Query: 61 QVIRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSACWC-GRVINALGKPIDGDD 117 +LD ++ V + L G +V G P + C GR++N G+P+D Sbjct: 49 -----HLDESHVRAVTLHRTTGLKRGMVVHDLGAPLQVPVSTACLGRLVNLFGEPLDNGP 103 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + P A +R E +TGI+VID+ P G + G+F G+G+GK+ L Sbjct: 104 PLPDSEYRDAHRPPAPLAESRAAGET-LETGIKVIDLLCPFARGGKTGLFGGAGVGKTVL 162 Query: 178 LS--MFARSDCFDKV-IISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKM 233 + M A S V + + VGER RE E + L KS++V DESP +R Sbjct: 163 IMEFMHAVSALHRGVSVFAGVGERIREGHELWRELAEAGVLDKSLLVYGQMDESPGVRFR 222 Query: 234 APLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 LTA+T AEY + VL ++D++ RF + EI++ G +P GY ++ +E+ Sbjct: 223 VGLTALTYAEYLRDTLHTEVLFLIDNVFRFVQAGSEISSLLGRMPATVGYQPTLATEVAE 282 Query: 293 LLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVD 352 + ERI + G IT+V +V V D+ DP ++ S LD +VL+R A +G YP +D Sbjct: 283 IEERI--TSTAAGAITSVQAVYVPADDMTDPAVAAILSHLDTTVVLSRVQAGKGIYPAID 340 Query: 353 PLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 PLAS SRL D+ D + + + R+ E DI Sbjct: 341 PLASTSRLMDRHVIGDRHYGIAQGVREHLARYRELEDI 378 >gi|165977082|ref|YP_001652675.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|226739969|sp|B0BRX2|ATPB_ACTPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|165877183|gb|ABY70231.1| ATP synthase beta chain [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 457 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + +I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376 >gi|293393689|ref|ZP_06637998.1| ATP synthase F1 sector beta subunit [Serratia odorifera DSM 4582] gi|291423811|gb|EFE97031.1| ATP synthase F1 sector beta subunit [Serratia odorifera DSM 4582] Length = 460 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P + +TGI+V+D+ Sbjct: 83 ATLGRIMNVLGQPIDM-----KGDIGEEERWAIHRAAPSYEELSNSQDLLETGIKVMDLI 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R++A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|146337564|ref|YP_001202612.1| F0F1 ATP synthase subunit beta [Bradyrhizobium sp. ORS278] gi|166201693|sp|A4YKE0|ATPB_BRASO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|146190370|emb|CAL74366.1| ATP synthase subunit beta, membrane-bound, F1 sector [Bradyrhizobium sp. ORS278] Length = 480 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 19/317 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ GR+IN +G+PID + K D I + P ++ + TGI+V+D Sbjct: 81 RVPVGEGTLGRIINVIGEPIDEAGPV-KADNVRAIHQEAPTYTDQSTEAEILVTGIKVVD 139 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206 + P G +IG+F G+G+GK+ L+ + + + VGER RE EFI Sbjct: 140 LLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFI 199 Query: 207 EDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 E + + K +V +E P R LT +TIAE F KG +VL +D+ Sbjct: 200 ESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDN 259 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D Sbjct: 260 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPAD 317 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377 + DP + + LD L+RS+AE+G YP VDPL S SR+ +E V+ + Sbjct: 318 DLTDPAPATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPLVVGEEHYAVARQVQ 377 Query: 378 HLIHRFEETRDIRLIGG 394 ++ R++ +DI I G Sbjct: 378 QVLQRYKALQDIIAILG 394 >gi|210617049|ref|ZP_03291384.1| hypothetical protein CLONEX_03606 [Clostridium nexile DSM 1787] gi|210149572|gb|EEA80581.1| hypothetical protein CLONEX_03606 [Clostridium nexile DSM 1787] Length = 463 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 157/293 (53%), Gaps = 9/293 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG IDG +SL + + I P + V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGDTIDGGESL-ENEEHWVIHRDAPTFEEQSPVVEILETGIKVIDLLAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ R+ + I + VGER RE + + L K+ Sbjct: 145 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLDKTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G +P Sbjct: 205 LVFGQMNEPPGSRMRVAETGLTMAEYFRDEQHQNVLLFIDNIFRFVQAGSEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLANEVGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R + E+G YP VDPL S SR+ + +E ++ ++ ++ +++E +DI Sbjct: 323 LSRKIVEQGIYPAVDPLESNSRILEADVVGEEHYEVARNVQAILQKYKELQDI 375 >gi|33151292|ref|NP_872645.1| F0F1 ATP synthase subunit beta [Haemophilus ducreyi 35000HP] gi|81836085|sp|Q7VPP0|ATPB_HAEDU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|33147512|gb|AAP95034.1| ATP synthase beta chain [Haemophilus ducreyi 35000HP] Length = 457 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + +I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376 >gi|13272348|gb|AAK17111.1|AF291051_8 ATP synthase beta subunit [Candidatus Carsonella ruddii] Length = 447 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 154/295 (52%), Gaps = 10/295 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 C GR++N LG PID + + + + PP + Q +TGI+VID+ P Sbjct: 80 CTLGRILNVLGNPIDNNGEIISN--KKKPIHCSPPKFSDQVFSNNILETGIKVIDLLCPF 137 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ + R+ + S+ VGER RE +F + N L Sbjct: 138 LRGGKIGLFGGAGVGKTINMMELIRNIAIEHKGCSVFIGVGERTREGNDFYYEMKESNVL 197 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K ++ +E R LT ++IAE F G +VLL +D+I RF + EI+ G Sbjct: 198 DKVSLIYGQMNEPSGNRLRVALTGLSIAEEFREMGKDVLLFIDNIYRFTLAGTEISALLG 257 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ +L ERI S + G+IT+V ++ V D+ DP + + LD Sbjct: 258 RMPSAVGYQPTLAEEMGKLQERI--SSTKNGSITSVQAIYVPADDLTDPSPSTTFTHLDS 315 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 IVL+R +AE G YP +DPL S S+ D E ++ +S+ + +++E +D Sbjct: 316 TIVLSRQIAELGIYPAIDPLESYSKQLDPYIVGIEHYEIANSVKFYLQKYKELKD 370 >gi|325295434|ref|YP_004281948.1| ATP synthase subunit beta [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065882|gb|ADY73889.1| ATP synthase subunit beta [Desulfurobacterium thermolithotrophum DSM 11699] Length = 481 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 158/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+PID + + + I PP ++ + F+TGI+VID+ P G Sbjct: 98 GRIFNVVGEPIDEQGPV-EAEEYWPIHRPTPPLTEQKSTAEIFETGIKVIDLLEPYAKGG 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ LL + + + VGER RE + ++E L +V Sbjct: 157 KTGLFGGAGVGKTVLLMELIHNVAMKHGGFSVFAGVGERTREGTDLWLEMKESGVLPNTV 216 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R +T VT+AEYF +G +VL +D++ RF + E++ G +P Sbjct: 217 LVYGQMNEPPGNRWRVAMTGVTMAEYFRDVEGRDVLFFVDNMFRFIQAGSEVSALLGRIP 276 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +E+ + ERI + KG+IT+V ++ V D+ DP ++ + LD V Sbjct: 277 SEVGYQPTLSTEVGAIQERI--TSTNKGSITSVQAIYVPADDFTDPAPFTLFAHLDATTV 334 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R+LAE+G YP VDPL S SR+ D + ++ + + R++E +I I G Sbjct: 335 LSRALAEQGIYPAVDPLESTSRMLDPQIVGERHYRVAREVQRYLQRYKELLEIIAILG 392 >gi|148252015|ref|YP_001236600.1| F0F1 ATP synthase subunit beta [Bradyrhizobium sp. BTAi1] gi|190358204|sp|A5E950|ATPB1_BRASB RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|146404188|gb|ABQ32694.1| ATP synthase F1 subcomplex beta subunit [Bradyrhizobium sp. BTAi1] Length = 480 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 19/317 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ GR+IN +G+PID + K D I + P ++ + TGI+V+D Sbjct: 81 RVPVGEGTLGRIINVIGEPIDEAGPV-KADSLRAIHQEAPSYTDQSTEAEILVTGIKVVD 139 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206 + P G +IG+F G+G+GK+ L+ + + + VGER RE EFI Sbjct: 140 LLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFI 199 Query: 207 EDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 E + + K +V +E P R LT +TIAE F KG +VL +D+ Sbjct: 200 ESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDN 259 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D Sbjct: 260 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPAD 317 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377 + DP + + LD L+RS+AE+G YP VDPL S SR+ +E V+ + Sbjct: 318 DLTDPAPATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPLVVGEEHYAVARQVQ 377 Query: 378 HLIHRFEETRDIRLIGG 394 ++ R++ +DI I G Sbjct: 378 QVLQRYKALQDIIAILG 394 >gi|294783123|ref|ZP_06748447.1| ATP synthase F1, beta subunit [Fusobacterium sp. 1_1_41FAA] gi|294480001|gb|EFG27778.1| ATP synthase F1, beta subunit [Fusobacterium sp. 1_1_41FAA] Length = 462 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D + + + I + P + + + F+TGI+VID+ P Sbjct: 82 AVLGRILNVLGEPVDNQGPV-NAETVLPIHREAPEFDDLETETEIFETGIKVIDLLAPYI 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + IS+ VGER RE R+ + + Sbjct: 141 KGGKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYNEMTESGVIT 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ G Sbjct: 201 KTALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 261 RIPSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VL+R++A G YP VDPL S S+ L++ + ++ + ++ R++E +DI I Sbjct: 319 TTVLSRNIASLGIYPAVDPLDSTSKALSEDIVGREHYEIARKVQEVLQRYKELQDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|268593514|ref|ZP_06127735.1| ATP synthase F1, beta subunit [Providencia rettgeri DSM 1131] gi|291310937|gb|EFE51390.1| ATP synthase F1, beta subunit [Providencia rettgeri DSM 1131] Length = 460 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P + +TGI+V+D+ Sbjct: 83 ATLGRIMNVLGQPIDM-----KGDIGEEERWSIHRAAPSYEELANSTELLETGIKVMDLI 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|148827675|ref|YP_001292428.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittGG] gi|166201710|sp|A5UGY9|ATPB_HAEIG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|148718917|gb|ABR00045.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittGG] Length = 457 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID ++G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIVNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|94263072|ref|ZP_01286891.1| ATP synthase F1, beta subunit [delta proteobacterium MLMS-1] gi|93456615|gb|EAT06723.1| ATP synthase F1, beta subunit [delta proteobacterium MLMS-1] Length = 473 Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 160/300 (53%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR++N +G+ +DG +GK + M + K P Q E +TGI+VID+ P Sbjct: 94 GRIMNVVGRSVDG---MGKIESDKMRPIHKPAPLFTEQDTEVHVLETGIKVIDLLVPFPR 150 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G GK+ ++ + IS+ VGER RE + + L K Sbjct: 151 GGKMGLFGGAGCGKTVIMMEMVNNIAMHHGGISVFCGVGERTREGNDLYHEMKESGVLPK 210 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V E P R LT ++ AEYF +G +VLL +D+I RF + +E++ G Sbjct: 211 AALVYGQMTEPPGARSRVALTGLSAAEYFRDEEGQDVLLFVDNIFRFTQAGQEVSALLGR 270 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ ++L L ERI + KG+ITAV V V D+ DP + + LDG Sbjct: 271 IPSAVGYQPTLGTDLGGLQERI--TSTNKGSITAVQCVYVPADDLTDPAPATTFAHLDGT 328 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394 +VL+R +AE G YP VDPL S SR+ D ++ LV+ + + ++++ +DI I G Sbjct: 329 VVLSRQIAELGIYPAVDPLDSTSRILDPNVLGEDHYLVARGVQMTLQKYKDLQDIIAILG 388 >gi|315650482|ref|ZP_07903552.1| ATP synthase F1 sector beta subunit [Eubacterium saburreum DSM 3986] gi|315487278|gb|EFU77590.1| ATP synthase F1 sector beta subunit [Eubacterium saburreum DSM 3986] Length = 463 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 156/294 (53%), Gaps = 9/294 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + K + + I K P + + +TGI+V+D+ P G Sbjct: 88 LGRIFNVLGEVIDKKEP-PKVEEYLPIHRKAPSFEEQSTQTEILETGIKVVDLLCPYQKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ R+ + + + VGER RE + + + K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMTESGVINKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF KG +VLL +D+I RF + E++ G + Sbjct: 207 TMVFGQMNEPPGARMRVGLTGLTMAEYFRDKGGKDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 267 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPANTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 VL+RS+ E G YP VDPL S SR+ +E ++ + ++ +++E +DI Sbjct: 325 VLDRSIVEMGIYPAVDPLGSTSRILSPHVVGEEHYEVAQRVQEVLQKYKELQDI 378 >gi|300721114|ref|YP_003710382.1| membrane-bound ATP synthase, F1 sector subunit beta [Xenorhabdus nematophila ATCC 19061] gi|297627599|emb|CBJ88118.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Xenorhabdus nematophila ATCC 19061] Length = 460 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG PID +G+ + I P ++ +TGI+V+D+ P Sbjct: 83 ATLGRIMNVLGDPIDMKGEIGEEE-RWSIHRTAPTYEELSNSQELLETGIKVMDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|282861130|ref|ZP_06270195.1| ATP synthase F1, beta subunit [Streptomyces sp. ACTE] gi|282563788|gb|EFB69325.1| ATP synthase F1, beta subunit [Streptomyces sp. ACTE] Length = 480 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ ++ + I K P + + F+TG++V+D+ TP G Sbjct: 101 GKVFNTLGQILNEPEAESQVTERWPIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ M R + D V + + VGER RE + I++ L K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIMRVAKLHDGVSVFAGVGERTREGNDLIDEMTESGVLDKTA 220 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 221 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 280 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 281 SAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++E+G YP VDPL S SR+ D + S D S + ++ ++++ +DI I G Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYDAASRVKGILQKYKDLQDIIAILG 396 >gi|195064082|ref|XP_001996493.1| GH23965 [Drosophila grimshawi] gi|193892039|gb|EDV90905.1| GH23965 [Drosophila grimshawi] Length = 506 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P + ++ TGI+V+ Sbjct: 110 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAPIHAEAPEFVEMSVEQEILVTGIKVV 168 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 169 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 228 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 287 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 345 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 406 LQDYKSLQDIIAILG 420 >gi|461565|sp|P35110|ATPB_CHLLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|299279|gb|AAB25774.1| F-ATPase beta subunit [Chlorobium limicola] Length = 462 Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 160/303 (52%), Gaps = 17/303 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDL----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR++N +G PIDG KG + S I P + F+TGI+VID+ P Sbjct: 86 LGRMLNVVGDPIDG-----KGPVLSKKSYSIHRTAPKFDELSTKAEMFETGIKVIDLLEP 140 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G + G+F G+G+GK+ L+ + ++ S+ VGER RE + + + Sbjct: 141 YSRGGKTGLFGGAGVGKTVLIMELINNIAKEQSGFSVFAGVGERTREGNDLWHEMMESGV 200 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 + K+ +V +E P R LT ++IAEYF +G +VLL +D+I RF + E++ Sbjct: 201 IDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEGRDVLLFIDNIFRFTQAGSEVSAL 260 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L +RI + +KG++T+V ++ V D+ DP + + L Sbjct: 261 LGRMPSAVGYQPTLSTEMGELQDRI--TSTKKGSVTSVQAIYVPADDLTDPAPATAFTHL 318 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D VL+R +AE G YP VDPL S SR+ D D+ ++ ++ R+++ +DI Sbjct: 319 DATTVLSRQIAELGIYPAVDPLDSTSRILDPNVIGDDHYDTAQAVKQILQRYKDLQDIIA 378 Query: 392 IGG 394 I G Sbjct: 379 ILG 381 >gi|324995411|gb|EGC27323.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK678] Length = 468 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDTPFPADAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|53728944|ref|ZP_00134548.2| COG0055: F0F1-type ATP synthase, beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126209110|ref|YP_001054335.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae L20] gi|190150977|ref|YP_001969502.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303249889|ref|ZP_07336091.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307246571|ref|ZP_07528642.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307250941|ref|ZP_07532867.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307255556|ref|ZP_07537361.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307260007|ref|ZP_07541719.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307262135|ref|ZP_07543786.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|322513163|ref|ZP_08066294.1| ATP synthase F1 sector beta subunit [Actinobacillus ureae ATCC 25976] gi|166201686|sp|A3N2U4|ATPB_ACTP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226739968|sp|B3H2P3|ATPB_ACTP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|126097902|gb|ABN74730.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189916108|gb|ACE62360.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302650952|gb|EFL81106.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306852443|gb|EFM84677.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306856969|gb|EFM89099.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306861405|gb|EFM93394.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306865843|gb|EFM97719.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868112|gb|EFM99937.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|322121059|gb|EFX92883.1| ATP synthase F1 sector beta subunit [Actinobacillus ureae ATCC 25976] Length = 457 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + +I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEKGPIGE-EARWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376 >gi|15600747|ref|NP_254241.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PAO1] gi|107104656|ref|ZP_01368574.1| hypothetical protein PaerPA_01005735 [Pseudomonas aeruginosa PACS2] gi|116053705|ref|YP_794032.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa UCBPP-PA14] gi|152987192|ref|YP_001351667.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PA7] gi|218894657|ref|YP_002443527.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa LESB58] gi|296392421|ref|ZP_06881896.1| F0F1 ATP synthase subunit beta [Pseudomonas aeruginosa PAb1] gi|313111495|ref|ZP_07797296.1| ATP synthase beta chain [Pseudomonas aeruginosa 39016] gi|81539357|sp|Q9HT20|ATPB_PSEAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|122256275|sp|Q02DF4|ATPB_PSEAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166990372|sp|A6VF32|ATPB_PSEA7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740662|sp|B7V791|ATPB_PSEA8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|9951894|gb|AAG08939.1|AE004967_10 ATP synthase beta chain [Pseudomonas aeruginosa PAO1] gi|115588926|gb|ABJ14941.1| ATP synthase beta chain [Pseudomonas aeruginosa UCBPP-PA14] gi|150962350|gb|ABR84375.1| ATP synthase F1, beta subunit [Pseudomonas aeruginosa PA7] gi|218774886|emb|CAW30704.1| ATP synthase beta chain [Pseudomonas aeruginosa LESB58] gi|310883798|gb|EFQ42392.1| ATP synthase beta chain [Pseudomonas aeruginosa 39016] Length = 458 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ + I + P ++ + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPIDEAGPIGE-EERWGIHREAPSYADQAGGNELLETGIKVIDLVCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D D + +++ R++E +DI I G Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQDHYDTARGVQYVLQRYKELKDIIAILG 377 >gi|302755124|ref|XP_002960986.1| hypothetical protein SELMODRAFT_139657 [Selaginella moellendorffii] gi|300171925|gb|EFJ38525.1| hypothetical protein SELMODRAFT_139657 [Selaginella moellendorffii] Length = 427 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 105/312 (33%), Positives = 165/312 (52%), Gaps = 23/312 (7%) Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 C GR++N +G+PID GD D + I + P + ++ TGI+V+D+ P Sbjct: 34 CTLGRIMNVIGEPIDEIGDFVT---DHYLPIHREAPVFTEQSTEQEVLVTGIKVVDLLAP 90 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE +E IE Sbjct: 91 YQRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYKEMIESG 149 Query: 209 --YLGD--NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 LGD N K +V +E P R LT +T+AEYF ++G +VLL +D+I RF Sbjct: 150 VIKLGDKQNESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFT 209 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 210 QANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDP 267 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R ++E G YP VDPL S SR L+ + D + + ++ Sbjct: 268 APATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPRVIGEDHYQCARDVQKVLQS 327 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 328 YKNLQDIIAILG 339 >gi|291280259|ref|YP_003497094.1| F0F1-type ATP synthase subunit beta [Deferribacter desulfuricans SSM1] gi|290754961|dbj|BAI81338.1| F0F1-type ATP synthase, beta subunit [Deferribacter desulfuricans SSM1] Length = 468 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + + D I P +++ + +TGI+VID+ P G Sbjct: 89 GRILNVVGEPVDERGEV-QADDYWPIHRPAPKLEDQETGYEILETGIKVIDLLEPYTKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ L+ + S+ VGER RE + ++E L K Sbjct: 148 KTGLFGGAGVGKTVLIMELINNIAKQHGGYSVFCGVGERTREGNDLWLEMQEAGVLDKVA 207 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 ++ +E P R LT +TIAEYF +G +VLL +D+I RF+ + E++ G +P Sbjct: 208 LIYGQMNEPPGARMRVGLTGLTIAEYFRDVEGQDVLLFVDNIFRFSQAGSEVSALLGRMP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD V Sbjct: 268 SAVGYQPTLGTEMGELQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR+ D +E V+ + ++ R++E +DI I G Sbjct: 326 LSRQIAELGIYPAVDPLDSTSRILDPNIVGEEHYSVARGVQAVLQRYKELQDIIAILG 383 >gi|227823626|ref|YP_002827599.1| F0F1 ATP synthase subunit beta [Sinorhizobium fredii NGR234] gi|254808160|sp|C3M9S1|ATPB_RHISN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|227342628|gb|ACP26846.1| ATP synthase F1, beta subunit [Sinorhizobium fredii NGR234] Length = 505 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 19/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N +G+P+D + S + + PA Q E TGI+V+D+ P Sbjct: 118 LGRIMNVIGEPVDEAGPVETS--SRRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAK 175 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 176 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNK 234 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 + G K+ +V +E P R LT +TIAE+F +G +VL +D+I RF + E Sbjct: 235 HGGGEGSKAALVYGQMNEPPGARARVALTGLTIAEHFRDEGQDVLFFVDNIFRFTQAGSE 294 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ ++ ERI + KG+IT+V ++ V D+ DP + Sbjct: 295 VSALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATS 352 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD VL+RS+AE+G YP VDPL S SR+ D +E VS + + R++ + Sbjct: 353 FAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVSRKVQSTLQRYKALQ 412 Query: 388 DIRLIGG 394 DI I G Sbjct: 413 DIIAILG 419 >gi|34500026|gb|AAQ73595.1| ATP synthase beta subunit [Actinobacillus rossii] Length = 445 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 156/297 (52%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G + + I P + + +TGI+VID+ P G Sbjct: 84 GRIMNVLGEPIDQKGEIG-AEENWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKGG 142 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNVLDKVS 202 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 203 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 262 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 263 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 320 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R++A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 321 SRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 377 >gi|239586335|gb|ACR83542.1| ATP synthase beta subunit [Pectobacterium carotovorum] Length = 421 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG PID +G+ + I P ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGDPIDMKGEIGEEE-RWAIHRSAPSYEELSNSQELLETGIKVIDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|112791384|gb|ABI21962.1| ATP synthase beta subunit [Pectobacterium carotovorum subsp. odoriferum] Length = 421 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|261367325|ref|ZP_05980208.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176] gi|282570083|gb|EFB75618.1| ATP synthase F1, beta subunit [Subdoligranulum variabile DSM 15176] Length = 464 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 161/299 (53%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GRV N LG+P+D + ++ + + PA + Q +TGI+V+D+ P G Sbjct: 89 GRVFNLLGEPVD--EKPAPENMERWPIHRAAPAFDEQESSTEILETGIKVVDLICPYAKG 146 Query: 162 QRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ ++ + + + + VGER RE + + L K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIYNIATAHNGYSVFTGVGERTREGNDLYGEMQESGVLNKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 207 ALVYGQMNEPPGARMRVALSGLTMAEYFRDVKHQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTQKGSITSVQAVYVPADDLTDPAPATTFTHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +A +G YP VDPL S SR L+ + + K ++ ++ R+++ +DI I G Sbjct: 325 VLSRDIASQGIYPAVDPLDSTSRILSPEVVGQEHYKTARAVQQVLQRYKDLQDIIAIMG 383 >gi|240145788|ref|ZP_04744389.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82] gi|257202121|gb|EEV00406.1| ATP synthase F1, beta subunit [Roseburia intestinalis L1-82] gi|291534350|emb|CBL07462.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis M50/1] gi|291541181|emb|CBL14292.1| ATP synthase F1 subcomplex beta subunit [Roseburia intestinalis XB6B4] Length = 468 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 158/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG +DG +L +G+ I P ++ V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGDTLDGGKTL-EGEKHWCIHRDPPSFEDQSPVVEVLETGIKVIDLLAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ R+ + I + VGER RE + + L+K+ Sbjct: 145 KIGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLEKTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G +P Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFTQAGSEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R + E+G YP VDPL S SR+ ++ E + + ++ ++ E +DI I G Sbjct: 323 LSRKIVEQGIYPAVDPLESNSRILEEDVVGKEHYETARRVQEILQKYTELQDIIAILG 380 >gi|223043982|ref|ZP_03614023.1| ATP synthase F1, beta subunit [Staphylococcus capitis SK14] gi|314934172|ref|ZP_07841533.1| ATP synthase F1, beta subunit [Staphylococcus caprae C87] gi|222442697|gb|EEE48801.1| ATP synthase F1, beta subunit [Staphylococcus capitis SK14] gi|313653077|gb|EFS16838.1| ATP synthase F1, beta subunit [Staphylococcus caprae C87] Length = 470 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 156/302 (51%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID D+ + I + P + +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFDELSTKVEILETGIKVVDLLAPYI 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ + Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVI 205 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 KKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 265 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI S KG++T++ +V V D++ DP + + LD Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQAVFVPADDYTDPAPATTFAHLD 323 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR L D + + + ++ E +DI I Sbjct: 324 ATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQDHYDVAREVQSTLQKYRELQDIIAI 383 Query: 393 GG 394 G Sbjct: 384 LG 385 >gi|56808123|ref|ZP_00365911.1| COG0055: F0F1-type ATP synthase, beta subunit [Streptococcus pyogenes M49 591] Length = 403 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 163/313 (52%), Gaps = 12/313 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVESQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGGY 395 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAI--- 383 Query: 396 RPGVDLILDKAVH 408 G+D + D+ H Sbjct: 384 -LGMDELSDEEKH 395 >gi|114330304|ref|YP_746526.1| F0F1 ATP synthase subunit beta [Nitrosomonas eutropha C91] gi|122314650|sp|Q0AJB0|ATPB1_NITEC RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|114307318|gb|ABI58561.1| ATP synthase F1 subcomplex beta subunit [Nitrosomonas eutropha C91] Length = 460 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 150/298 (50%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID +G M I P + +TGI+VID+ P G Sbjct: 84 LGRIMDVLGRPIDEMGEIGAESF-MPIHRTAPAFDELSASTELLETGIKVIDLICPFAKG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 143 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 202 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 203 ALVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 262 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ RL ERI S + G+IT++ +V V D+ DP + LD +V Sbjct: 263 SAVGYQPTLAEEMGRLQERITSS--KTGSITSIQAVYVPADDLTDPSPATTFGHLDATVV 320 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D D + + R++E RDI I G Sbjct: 321 LSRDIASLGIYPAVDPLDSTSRQLDPLVVGEDHYNTAREVQQTLQRYKELRDIIAILG 378 >gi|112791376|gb|ABI21958.1| ATP synthase beta subunit [Pectobacterium atrosepticum] gi|112791378|gb|ABI21959.1| ATP synthase beta subunit [Pectobacterium betavasculorum] Length = 421 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|167584000|ref|ZP_02376388.1| type III secretion system ATPase [Burkholderia ubonensis Bu] Length = 268 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 89/205 (43%), Positives = 123/205 (60%), Gaps = 3/205 (1%) Query: 61 QVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSL 119 +V+ ++ + P G EI+ G V R + GRVI++ G+PIDG L Sbjct: 65 EVVGFTRNVALLSPFGTLGEINRGTRVIGLRRPLSVKVGNGILGRVIDSFGEPIDGLGPL 124 Query: 120 GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS 179 D +++ P M+R+ V+ TG+R++D L GQR+G+FA +G+GKSTLL Sbjct: 125 DY-DALRPVLAPPPNPMSRRMVDAPLATGVRIVDGLITLGEGQRMGIFAPAGVGKSTLLG 183 Query: 180 MFARSDCFDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTA 238 MFAR D +I+L+GERGREVREF+E +G D + +SVVV ATSD S I R A A Sbjct: 184 MFARGASCDVNVIALIGERGREVREFVELIMGEDGMARSVVVCATSDRSSIERAKAAYAA 243 Query: 239 VTIAEYFSSKGDNVLLILDSITRFA 263 IAEYF +G VLL++DS+TRFA Sbjct: 244 TAIAEYFRDQGKRVLLMMDSLTRFA 268 >gi|227327856|ref|ZP_03831880.1| F0F1 ATP synthase subunit beta [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 460 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|172059172|ref|YP_001806824.1| F0F1 ATP synthase subunit beta [Burkholderia ambifaria MC40-6] gi|226739982|sp|B1YQL4|ATPB_BURA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|171991689|gb|ACB62608.1| ATP synthase F1, beta subunit [Burkholderia ambifaria MC40-6] Length = 464 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382 >gi|320008536|gb|ADW03386.1| ATP synthase F1, beta subunit [Streptomyces flavogriseus ATCC 33331] Length = 480 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 163/298 (54%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ ++ + I K P + + F+TG++V+D+ TP G Sbjct: 101 GKVFNTLGQILNEPEAEAQITERWPIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ M R + D V + + VGER RE + I++ L K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIMRVAKLHDGVSVFAGVGERTREGNDLIDEMTDSGVLDKTA 220 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 221 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 280 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 281 SAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++E+G YP VDPL S SR+ D + A D S + ++ ++++ +DI I G Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYDTASRVKGILQKYKDLQDIIAILG 396 >gi|112791382|gb|ABI21961.1| ATP synthase beta subunit [Pectobacterium carotovorum] Length = 421 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|90421698|ref|YP_530068.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris BisB18] gi|118573734|sp|Q21CY7|ATPB_RHOPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|90103712|gb|ABD85749.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris BisB18] Length = 476 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 158/304 (51%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + L I ++ P ++ + TGI+V+D+ P G Sbjct: 90 GRIMNVIGEPVDEQGPVANEGLR-PIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211 +IG+F G+G+GK+ L+ + + + VGER RE EFIE + G Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R L+ +T+AE+F +G +VL +D+I RF + E++ Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSA 268 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + + Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSITSVQAIYVPADDLTDPAPATSFAH 326 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIR 390 LD VLNR+++E+G YP VDPL S SR+ DE + + ++ +++ +DI Sbjct: 327 LDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGDEHYQTARMVQQVLQKYKSLQDII 386 Query: 391 LIGG 394 I G Sbjct: 387 AILG 390 >gi|239832877|ref|ZP_04681206.1| ATP synthase F1, beta subunit [Ochrobactrum intermedium LMG 3301] gi|239825144|gb|EEQ96712.1| ATP synthase F1, beta subunit [Ochrobactrum intermedium LMG 3301] Length = 516 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K + I P + + + TGI+V+D+ P G Sbjct: 129 LGRIMNVIGEPVDEAGPI-KTTATRAIHQSAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 187 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 188 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 246 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R L+ +T+AE F +G +VL +D+I RF + E+ Sbjct: 247 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 306 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 307 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 364 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D DE V+ + ++ R++ +D Sbjct: 365 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGDEHYAVARQVQSILQRYKALQD 424 Query: 389 IRLIGG 394 I I G Sbjct: 425 IIAILG 430 >gi|227113923|ref|ZP_03827579.1| F0F1 ATP synthase subunit beta [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 460 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|225677296|ref|ZP_03788275.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225590659|gb|EEH11907.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 475 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 106/337 (31%), Positives = 174/337 (51%), Gaps = 28/337 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GR+ N +G+ ID L KG ++E + + PP+ QR+ E+ TGI+VID+ P Sbjct: 86 LGRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLK 144 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 145 GGKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVI 202 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266 ++V+V +E P R LTA+T+ EYF + +VL +D+I RF + Sbjct: 203 NINEHEKSQAVLVYGQMNEPPGARARVALTALTMTEYFRDRENQDVLFFVDNIFRFTQAG 262 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP Sbjct: 263 SEISALLGRIPSAVGYQPTLATDMGAMQERIASTTS--GSITSVQAIYVPADDLTDPAPA 320 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + S LD VL+R +AE G YP VDPL S S+ L+ + + + S + ++ ++ Sbjct: 321 TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKS 380 Query: 386 TRDIRLIGGYRPGVD---LILDKAVHQVPIIYDFLKQ 419 +DI I G D +I+D+A I FL Q Sbjct: 381 LQDIIAILGMDELSDEDKIIVDRARK----IQKFLSQ 413 >gi|112791380|gb|ABI21960.1| ATP synthase beta subunit [Pectobacterium wasabiae] Length = 421 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|34500004|gb|AAQ73584.1| ATP synthase beta subunit [Actinobacillus lignieresii] Length = 444 Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + +I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEKGPIGE-EARWDIHRXAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRIP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376 >gi|258422897|ref|ZP_05685797.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9635] gi|257846921|gb|EEV70935.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9635] Length = 470 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISES-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385 >gi|237744080|ref|ZP_04574561.1| ATP synthase subunit beta [Fusobacterium sp. 7_1] gi|256028115|ref|ZP_05441949.1| F0F1 ATP synthase subunit beta [Fusobacterium sp. D11] gi|260494335|ref|ZP_05814466.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_33] gi|289766055|ref|ZP_06525433.1| ATP synthase subunit beta [Fusobacterium sp. D11] gi|229431309|gb|EEO41521.1| ATP synthase subunit beta [Fusobacterium sp. 7_1] gi|260198481|gb|EEW95997.1| ATP synthase F1, beta subunit [Fusobacterium sp. 3_1_33] gi|289717610|gb|EFD81622.1| ATP synthase subunit beta [Fusobacterium sp. D11] Length = 462 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 161/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+P+D + + + I + P + + + F+TGI+VID+ P G Sbjct: 84 LGRILNVLGEPVDNQGPI-NAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAPYIKG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE R+ + + K+ Sbjct: 143 GKIGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYGEMTESGVITKT 202 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ G + Sbjct: 203 ALVYGQMNEPPGARLRVALTGLTVAENFRDKDGQDVLLFIDNIFRFTQAGSEVSALLGRI 262 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 263 PSAVGYQPNLATEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFSHLDATT 320 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G YP VDPL S S+ L++ + ++ + ++ R++E +DI I G Sbjct: 321 VLSRNIASLGIYPAVDPLDSTSKALSEDIVGKEHYEIARKVQEVLQRYKELQDIIAILG 379 >gi|154687796|ref|YP_001422957.1| F0F1 ATP synthase subunit beta [Bacillus amyloliquefaciens FZB42] gi|166201690|sp|A7Z9Q0|ATPB_BACA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|154353647|gb|ABS75726.1| AtpD [Bacillus amyloliquefaciens FZB42] Length = 473 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG ID ++ L D + + + P+ + E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGDKIDLNEPL-PADAQKDPIHRSAPSFDELSTEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + F E + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R LT +T+AE+F K G +VL +D+I RF + E++ Sbjct: 209 KKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDKQGQDVLFFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR LA + + + + + R++E +DI I Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|42561403|ref|NP_975854.1| F0F1 ATP synthase subunit beta [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81829344|sp|Q6MS94|ATPB_MYCMS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|42492901|emb|CAE77496.1| ATP SYNTHASE BETA CHAIN [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 475 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 108/305 (35%), Positives = 159/305 (52%), Gaps = 18/305 (5%) Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSM 126 +IV +G E + G V + +P+ GR+ N LG PID L D+ Sbjct: 62 EIVRTIAMGPTEGLKRGLDVINTNSPITAPTGMEVLGRMFNVLGDPIDEKPDL---DVKR 118 Query: 127 EIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-- 183 E + K P + +TGI+VID+ P G ++G+F G+G+GK+ L+ Sbjct: 119 EPIHKDAPKYEELVTTTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINNI 178 Query: 184 SDCFDKV-IISLVGERGRE----VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 + + V + + VGER RE EFIE + L K+ +V +E P R LT Sbjct: 179 AKAHNGVSVFAGVGERTREGNDLYHEFIEAGV---LNKTCLVFGQMNEPPGARMRVALTG 235 Query: 239 VTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 +TIAEYF K +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI Sbjct: 236 LTIAEYFRDQKNMDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI 295 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 + + G+IT+V +V V D+ DP + + LD IVL+RS+A G YP VDPLAS Sbjct: 296 --TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASS 353 Query: 358 SRLAD 362 SR+ D Sbjct: 354 SRVLD 358 >gi|319796134|ref|YP_004157774.1| ATP synthase f1, beta subunit [Variovorax paradoxus EPS] gi|315598597|gb|ADU39663.1| ATP synthase F1, beta subunit [Variovorax paradoxus EPS] Length = 466 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 107/310 (34%), Positives = 162/310 (52%), Gaps = 21/310 (6%) Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+++ LG+PID GD S DL+ I K P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDERGDVSQ---DLTASIHRKAPAYDELSPSQDLLETGIKVIDLVCP 137 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSG 196 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 DNL +S V V +E P R LT +TIAE F +G +VL +D+I R+ + Sbjct: 197 VVNLDNLPESKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLA 256 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP Sbjct: 257 GTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSP 314 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD +VL+R +A G YP VDPL S SR D +E V+ ++ + R++ Sbjct: 315 ATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEEHYNVARAVQGTLQRYK 374 Query: 385 ETRDIRLIGG 394 E RDI I G Sbjct: 375 ELRDIIAILG 384 >gi|167916130|ref|ZP_02503221.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 112] Length = 409 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 12/288 (4%) Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 G P D +L I PP ++ F TGI+VID+ PL G + +F G Sbjct: 2 GAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGG 61 Query: 170 SGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223 +G+GK+ L+ +M R + + +GER RE E + D G L ++V+V Sbjct: 62 AGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQ 119 Query: 224 SDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 +E P R PLTA+ IAEYF + NVLL++D++ RF + E++ G LP GY Sbjct: 120 MNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGY 179 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 ++ SE+ L ERI + E +TA+ +V V D+ DP ++ + +D +VL+R++ Sbjct: 180 QPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAM 237 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 A EG YP +DP+AS S L D + V+ + +I + E +D+ Sbjct: 238 AAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 285 >gi|46199210|ref|YP_004877.1| V-type ATP synthase subunit B [Thermus thermophilus HB27] gi|55981241|ref|YP_144538.1| V-type ATP synthase subunit B [Thermus thermophilus HB8] gi|32172456|sp|Q56404|VATB_THET8 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|81567676|sp|Q72J73|VATB_THET2 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|261278600|pdb|3A5C|D Chain D, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278601|pdb|3A5C|E Chain E, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278602|pdb|3A5C|F Chain F, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278608|pdb|3A5C|L Chain L, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278609|pdb|3A5C|M Chain M, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278610|pdb|3A5C|N Chain N, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278616|pdb|3A5D|D Chain D, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278617|pdb|3A5D|E Chain E, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278618|pdb|3A5D|F Chain F, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278624|pdb|3A5D|L Chain L, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278625|pdb|3A5D|M Chain M, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|261278626|pdb|3A5D|N Chain N, Inter-Subunit Interaction And Quaternary Rearrangement Defined By The Central Stalk Of Prokaryotic V1-Atpase gi|25188144|dbj|BAA09874.2| vacuolar type ATP synthase subunit [Thermus thermophilus] gi|46196835|gb|AAS81250.1| V-type sodium ATP synthase subunit B [Thermus thermophilus HB27] gi|55772654|dbj|BAD71095.1| V-type ATP synthase subunit B [Thermus thermophilus HB8] Length = 478 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/316 (31%), Positives = 163/316 (51%), Gaps = 22/316 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ S GR N +GKPIDG + + + I + R++ E+ +TGI ID Sbjct: 81 RLGVSKEMLGRRFNGIGKPIDGLPPITP-EKRLPITGLPLNPVARRKPEQFIQTGISTID 139 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200 + L GQ++ +F+GSG+ + + + AR V+ + +G R Sbjct: 140 VMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQR 199 Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258 E+ FI+++ L +SV+ + +D+ I R + P A+T+AEY + + D +VL+IL Sbjct: 200 ELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTD 259 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +T + ++REI E+P RGYP ++++L + ER G E +KG++T + + + D Sbjct: 260 MTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDD 319 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVS 374 + PI D I +G I L+R L +G YPP+DPL S+SRL + K + ++ K VS Sbjct: 320 DRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVS 379 Query: 375 SLTHLIHRFEETRDIR 390 L + DIR Sbjct: 380 D--QLYSAYANGVDIR 393 >gi|307257728|ref|ZP_07539485.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306863634|gb|EFM95560.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 467 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P + + +TGI+VID+ P G Sbjct: 92 LGRIMNVLGEPIDEKGPIGE-EARWNIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 151 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 211 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 270 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 271 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 328 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 329 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 386 >gi|77461947|ref|YP_351454.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens Pf0-1] gi|118573725|sp|Q3K441|ATPB_PSEPF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|77385950|gb|ABA77463.1| ATP synthase beta chain [Pseudomonas fluorescens Pf0-1] Length = 458 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 157/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ + I P + + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPIDEAGPIGE-EERWGIHRAAPSFAEQAGGNELLETGIKVIDLVCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ G Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ DP + + LD Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D D + + +++ R++E +DI I G Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNDHYETARGVQYVLQRYKELKDIIAILG 377 >gi|330831705|ref|YP_004394657.1| H(+)-transporting two-sector ATPase, F(1) subunit beta [Aeromonas veronii B565] gi|328806841|gb|AEB52040.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Aeromonas veronii B565] Length = 462 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 155/297 (52%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G+ + I P ++ +TGI+VID+ P G Sbjct: 88 GRIMNVLGEPIDEKGPIGEEE-CWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + + + VGER RE +F + + N L K Sbjct: 147 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKVS 206 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 207 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 266 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 267 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVL 324 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPL S SR D E + + ++ R++E +DI I G Sbjct: 325 SRQIAALGIYPAVDPLDSTSRQLDPLVVGKEHYETARGVQTVLQRYKELKDIIAILG 381 >gi|167907786|ref|ZP_02494991.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei NCTC 13177] Length = 414 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 149/288 (51%), Gaps = 12/288 (4%) Query: 110 GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 G P D +L I PP ++ F TGI+VID+ PL G + +F G Sbjct: 3 GAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGG 62 Query: 170 SGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223 +G+GK+ L+ +M R + + +GER RE E + D G L ++V+V Sbjct: 63 AGVGKTVLVMELIHAMVERYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQ 120 Query: 224 SDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 +E P R PLTA+ IAEYF + NVLL++D++ RF + E++ G LP GY Sbjct: 121 MNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGY 180 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 ++ SE+ L ERI + E +TA+ +V V D+ DP ++ + +D +VL+R++ Sbjct: 181 QPTLASEVAALQERI--ASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAM 238 Query: 343 AEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 A EG YP +DP+AS S L D + V+ + +I + E +D+ Sbjct: 239 AAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDV 286 >gi|300870132|ref|YP_003785003.1| F0F1-ATP synthase subunit beta [Brachyspira pilosicoli 95/1000] gi|300687831|gb|ADK30502.1| F0F1-ATP synthase, subunit beta [Brachyspira pilosicoli 95/1000] Length = 417 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/321 (31%), Positives = 166/321 (51%), Gaps = 10/321 (3%) Query: 81 ISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 IS GD + G + P GR+ N LG+ +D + + K I + P + Sbjct: 17 ISRGDEIIDTGNHIMVPVGNETIGRIFNVLGQTVDKGEPI-KAKEYRSIHANPPKFDALE 75 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVG 196 + F+TGI+VID+ P G + G+F G+G+GK+ L+ S+ + + VG Sbjct: 76 PKLEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELIHNIASEHGGYSVFAGVG 135 Query: 197 ERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLL 254 ER RE + + + K+ +V +E P R LTA+T+AEYF + +VLL Sbjct: 136 ERTREGNDLWSEMKESGVINKTCLVYGQMNEPPGARLRVALTALTMAEYFRDSANLDVLL 195 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V Sbjct: 196 FIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKHGSITSIQAVY 253 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLV 373 V D+ DP + + LD VL+R ++E+G YP VDPLAS SR+ D + ++ Sbjct: 254 VPADDLTDPAPATAFTHLDATTVLSREVSEKGIYPAVDPLASTSRILDPIVLGKEHYEVA 313 Query: 374 SSLTHLIHRFEETRDIRLIGG 394 + H++ R+ + +DI I G Sbjct: 314 RKVQHILQRYRDLQDIIAILG 334 >gi|50123428|ref|YP_052595.1| F0F1 ATP synthase subunit beta [Pectobacterium atrosepticum SCRI1043] gi|81826953|sp|Q6CYJ5|ATPB_ERWCT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|49613954|emb|CAG77407.1| ATP synthase beta chain [Pectobacterium atrosepticum SCRI1043] Length = 460 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRSAPSYEELSNSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|58268632|ref|XP_571472.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] gi|134113416|ref|XP_774733.1| hypothetical protein CNBF4120 [Cryptococcus neoformans var. neoformans B-3501A] gi|50257377|gb|EAL20086.1| hypothetical protein CNBF4120 [Cryptococcus neoformans var. neoformans B-3501A] gi|57227707|gb|AAW44165.1| conserved hypothetical protein [Cryptococcus neoformans var. neoformans JEC21] Length = 547 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 165/314 (52%), Gaps = 22/314 (7%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + P+A GR++N +G+PID + KG I + PP +++ + +TGI+V+D+ Sbjct: 155 VGPAAL--GRIMNVIGQPIDQRGPI-KGVREAPIHADAPPFVDQSTQAEVLETGIKVVDL 211 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVREFIEDYL 210 P G +IG+F G+G+GK+ L+ A++ V VGER RE + + Sbjct: 212 LAPYARGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMR 270 Query: 211 --------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I R Sbjct: 271 ETGVINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFR 328 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ Sbjct: 329 FTQAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTKKGSITSVQAVYVPADDLT 386 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLI 380 DP + + LD VL+RS+AE G YP VDPL S SR+ D + + + ++ Sbjct: 387 DPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSKSRMLDPRVVGQRHYDIATKTQQIL 446 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 447 QSYKSLQDIIAILG 460 >gi|153833268|ref|ZP_01985935.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01] gi|156977318|ref|YP_001448224.1| F0F1 ATP synthase subunit beta [Vibrio harveyi ATCC BAA-1116] gi|269961117|ref|ZP_06175485.1| ATP synthase subunit B [Vibrio harveyi 1DA3] gi|190358281|sp|A7N6Q5|ATPB2_VIBHB RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|148870404|gb|EDL69325.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01] gi|156528912|gb|ABU73997.1| hypothetical protein VIBHAR_06104 [Vibrio harveyi ATCC BAA-1116] gi|269834068|gb|EEZ88159.1| ATP synthase subunit B [Vibrio harveyi 1DA3] Length = 461 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG PID +G+ +S EI P + +TG++VID+ P G Sbjct: 87 GRIMNVLGHPIDECGPIGE-QVSYEIHRDAPSYEEQSNSTALLETGVKVIDLICPFAKGG 145 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E V+ + + R++E +DI I G Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPQVVGQEHYDVARKVQQTLQRYKELKDIIAILG 380 >gi|257452841|ref|ZP_05618140.1| F0F1 ATP synthase subunit beta [Fusobacterium sp. 3_1_5R] gi|257466794|ref|ZP_05631105.1| F0F1 ATP synthase subunit beta [Fusobacterium gonidiaformans ATCC 25563] gi|315917942|ref|ZP_07914182.1| ATP synthase subunit beta [Fusobacterium gonidiaformans ATCC 25563] gi|317059382|ref|ZP_07923867.1| ATP synthase subunit beta [Fusobacterium sp. 3_1_5R] gi|313685058|gb|EFS21893.1| ATP synthase subunit beta [Fusobacterium sp. 3_1_5R] gi|313691817|gb|EFS28652.1| ATP synthase subunit beta [Fusobacterium gonidiaformans ATCC 25563] Length = 465 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 159/305 (52%), Gaps = 17/305 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+P+D KG + E I + P ++ V + F+TGI+VID+ Sbjct: 82 AVLGRILNVLGEPVDQ-----KGPVETEEYLPIHREAPKFEEQETVTEIFETGIKVIDLL 136 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G + G+F G+G+GK+ L+ + IS+ VGER RE R+ + Sbjct: 137 APYIKGGKTGLFGGAGVGKTVLIMELINNIAKGHGGISVFAGVGERTREGRDLYNEMTES 196 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270 L K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ Sbjct: 197 GVLNKTSLVYGQMNEPPGARLRVALTGLTVAENFRDKEGQDVLLFIDNIFRFTQAGSEVS 256 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S Sbjct: 257 ALLGRIPSAVGYQPNLATEMGTLQERI--TSTKSGSITSVQAVYVPADDLTDPAPATTFS 314 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R +A G YP VDPL S S+ L+ + ++ + ++ R+ E +DI Sbjct: 315 HLDATTVLSRDIASLGIYPAVDPLDSTSKALSPDIVGKEHYEVAREVQRVLQRYTELQDI 374 Query: 390 RLIGG 394 I G Sbjct: 375 IAILG 379 >gi|125717636|ref|YP_001034769.1| F0F1 ATP synthase subunit beta [Streptococcus sanguinis SK36] gi|166222420|sp|A3CM14|ATPB_STRSV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|125497553|gb|ABN44219.1| Proton-translocating ATPase, F1 sector, beta subunit, putative [Streptococcus sanguinis SK36] gi|324990540|gb|EGC22476.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK353] gi|324993286|gb|EGC25206.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK405] gi|327461557|gb|EGF07888.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK1] gi|327473281|gb|EGF18701.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK408] gi|327489411|gb|EGF21204.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK1058] gi|328945463|gb|EGG39614.1| ATP synthase F1 sector beta subunit [Streptococcus sanguinis SK1087] Length = 468 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 155/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID D I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLDAPFPADAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALSPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|49049|emb|CAA45341.1| ATPase beta-subunit [Thermus thermophilus] Length = 478 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/316 (31%), Positives = 163/316 (51%), Gaps = 22/316 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ S GR N +GKPIDG + + + I + R++ E+ +TGI ID Sbjct: 81 RLGVSKEMLGRRFNGIGKPIDGLPPITP-EKRLPITGLPLNPVARRKPEQFIQTGISTID 139 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200 + L GQ++ +F+GSG+ + + + AR V+ + +G R Sbjct: 140 VMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQR 199 Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258 E+ FI+++ L +SV+ + +D+ I R + P A+T+AEY + + D +VL+IL Sbjct: 200 ELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTD 259 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +T + ++REI E+P RGYP ++++L + ER G E +KG++T + + + D Sbjct: 260 MTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVEGKKGSVTQIPILSMPDD 319 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVS 374 + PI D I +G I L+R L +G YPP+DPL S+SRL + K + ++ K VS Sbjct: 320 DRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVS 379 Query: 375 SLTHLIHRFEETRDIR 390 L + DIR Sbjct: 380 D--QLYSAYANGVDIR 393 >gi|124265390|ref|YP_001019394.1| F0F1 ATP synthase subunit beta [Methylibium petroleiphilum PM1] gi|190358680|sp|A2SC70|ATPB_METPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|124258165|gb|ABM93159.1| Sodium-transporting two-sector ATPase [Methylibium petroleiphilum PM1] Length = 471 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 108/340 (31%), Positives = 173/340 (50%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G +V + G P GR+++ LG PID + +LSM Sbjct: 54 VVRTIALGSSDGLRRGLMVSNTGAAITVPVGKATLGRIMDVLGSPIDERGPV-SAELSMP 112 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 113 IHRKAPAYDELSPSQELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 172 Query: 184 SDCFDKVIISLVGERGREVREFIEDY------LGDNLKKSVV--VVATSDESPILRKMAP 235 + V VGER RE +F + + ++L +S V V +E P R Sbjct: 173 AHSGLSVFAG-VGERTREGNDFYHEMSDSKVVVQEDLTQSKVAMVYGQMNEPPGNRLRVA 231 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT +TIAE F +G +VL +D+I R+ + E++ G +P A GY ++ E+ RL E Sbjct: 232 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 291 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL Sbjct: 292 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLD 349 Query: 356 SVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 S SR D +E ++ ++ R++E RDI I G Sbjct: 350 STSRQIDPNVVGEEHYNTTRAVQQVLQRYKELRDIIAILG 389 >gi|329578108|gb|EGG59520.1| ATP synthase F1, beta subunit [Enterococcus faecalis TX1467] Length = 465 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV + LG ID + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFSVLGDTIDLEAPFPADAERSGIHKKAPAFDELSTSNEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GNKGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYYEMKDSGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG+IT++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSITSIQAIYVPADDYTDPAPATAFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S LA + + ++ + + H++ R+ E +DI I G Sbjct: 327 NLERKLTEQGIYPAVDPLASSSSALAPEIVGEEHYEVATEVQHILQRYRELQDIIAILG 385 >gi|308051487|ref|YP_003915053.1| ATP synthase F1 subcomplex beta subunit [Ferrimonas balearica DSM 9799] gi|307633677|gb|ADN77979.1| ATP synthase F1 subcomplex beta subunit [Ferrimonas balearica DSM 9799] Length = 460 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 158/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + I + P ++ + +TG++VID+ P Sbjct: 83 ATLGRIMNVLGEPIDEAGDIGE-EERWSIHREAPSYEDQSSATELLETGVKVIDLVCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLD 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--ASTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP +DPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VVLSRDIAARGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQSVLQRYKELKDIIAILG 379 >gi|313680348|ref|YP_004058087.1| h+transporting two-sector atpase alpha/beta subunit central region [Oceanithermus profundus DSM 14977] gi|313153063|gb|ADR36914.1| H+transporting two-sector ATPase alpha/beta subunit central region [Oceanithermus profundus DSM 14977] Length = 467 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 166/317 (52%), Gaps = 15/317 (4%) Query: 60 GQVIRINLDI----VYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQVI ++ + V+ G+ + LV R +SP GR N +GKPIDG Sbjct: 45 GQVIEVSEEYAVIQVFEETTGLDLATTTVSLVEDVARLGVSPE--MLGRRFNGIGKPIDG 102 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + I + P + R++ E+ +TGI ID+ + GQ++ +F+GSG+ + Sbjct: 103 LPPITPEKREPIIGKPINP-VARRKPEEFIQTGISTIDVMNTMVRGQKLPIFSGSGLPAN 161 Query: 176 TLLSMFARS------DCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESP 228 L + AR D V+ + +G RE+ F+ ++ L +SV+ + +D+ Sbjct: 162 ELAAQIARQATVPGEDVQFAVVFAAMGITQRELSFFVNEFERTGALARSVLFLNKADDPT 221 Query: 229 ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 I R + P A+T+AEY + + D +VL+IL + + ++RE+A + E+P RGYP ++ Sbjct: 222 IERILTPRMALTVAEYLAFEHDYHVLVILTDMLNYCDALREVAASREEIPGRRGYPGYMY 281 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 ++L + ER G E + G++T + + + D+ P+ D I +G I L+R L + Sbjct: 282 TDLATIYERAGVIEGKSGSVTQLPILSMPDDDRTHPVPDLTGYITEGQIQLSRELHRKNL 341 Query: 348 YPPVDPLASVSRLADKA 364 YPP+DPL S+SRL + A Sbjct: 342 YPPIDPLPSLSRLMNNA 358 >gi|261823738|ref|YP_003261844.1| F0F1 ATP synthase subunit beta [Pectobacterium wasabiae WPP163] gi|261607751|gb|ACX90237.1| ATP synthase F1, beta subunit [Pectobacterium wasabiae WPP163] Length = 460 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGDPIDM-----KGDIGEEERWAIHRAAPSYEELSNSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|154251918|ref|YP_001412742.1| F0F1 ATP synthase subunit beta [Parvibaculum lavamentivorans DS-1] gi|190358697|sp|A7HT52|ATPB_PARL1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|154155868|gb|ABS63085.1| ATP synthase F1, beta subunit [Parvibaculum lavamentivorans DS-1] Length = 478 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 20/309 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+P+D + K + EI + P + + + TGI+V+D+ P G Sbjct: 87 GRIINVIGEPVDEAGPV-KHEARREIHQEAPSFVEQSTEAQMLVTGIKVVDLLAPYARGG 145 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----- 210 +IG+F G+G+GK+ L+ + + + VGER RE E IE + Sbjct: 146 KIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKDPN 205 Query: 211 ---GDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 GD K +V +E P R LT +T+AE+F KG +VL +D+I RF + Sbjct: 206 ENNGDTTGSKCALVFGQMNEPPGARARVALTGLTVAEHFRDKGQDVLFFVDNIFRFTQAG 265 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 266 SEVSALLGRIPSAVGYQPTLSTDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAPA 323 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VLNR+++E+G YP VDPL S SR L + + + ++ R++ Sbjct: 324 TSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRILEPRVVGQEHYDTARQVQEILQRYKS 383 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 384 LQDIIAILG 392 >gi|301320724|gb|ADK69367.1| ATP synthase F1, beta subunit [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 475 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 109/312 (34%), Positives = 160/312 (51%), Gaps = 18/312 (5%) Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSM 126 +IV +G E + G V + +P+ GR+ N LG PID L D+ Sbjct: 62 EIVRTIAMGPTEGLKRGLDVINTNSPITAPTGMEVLGRMFNVLGDPIDEKPDL---DVKR 118 Query: 127 EIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-- 183 E + K P + +TGI+VID+ P G ++G+F G+G+GK+ L+ Sbjct: 119 EPIHKDAPKYEELVTTTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINNI 178 Query: 184 SDCFDKV-IISLVGERGRE----VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 + + V + + VGER RE EFIE + L K+ +V +E P R LT Sbjct: 179 AKAHNGVSVFAGVGERTREGNDLYHEFIEAGV---LNKTCLVFGQMNEPPGARMRVALTG 235 Query: 239 VTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 +TIAEYF K +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI Sbjct: 236 LTIAEYFRDQKNMDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI 295 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 + + G+IT+V +V V D+ DP + + LD IVL+RS+A G YP VDPLAS Sbjct: 296 --TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASS 353 Query: 358 SRLADKAWSADE 369 SR+ D E Sbjct: 354 SRVLDPEIVGQE 365 >gi|294638351|ref|ZP_06716604.1| ATP synthase F1, beta subunit [Edwardsiella tarda ATCC 23685] gi|291088604|gb|EFE21165.1| ATP synthase F1, beta subunit [Edwardsiella tarda ATCC 23685] Length = 460 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG P+D +G+ + I P + ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGDPVDMKGEIGEEE-RWAIHRAAPSYEDLSNSQELLETGIKVIDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|118590578|ref|ZP_01547980.1| F0F1 ATP synthase subunit beta [Stappia aggregata IAM 12614] gi|118437041|gb|EAV43680.1| F0F1 ATP synthase subunit beta [Stappia aggregata IAM 12614] Length = 474 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 25/310 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR++N +G+P+D G++ E + + PA Q E TGI+V+D+ P Sbjct: 87 LGRIMNVIGEPVDE-----AGEIPHENKRAIHQEAPAFIEQSTEAEILVTGIKVVDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR----EFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 142 YAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYWEMIESG 200 Query: 210 L----GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 + G K+ +V +E P R LT +T+AE+F +G +VL +D+I RF + Sbjct: 201 VNKEGGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + KG+IT+V +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGGMQERI--TTTNKGSITSVQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 S + LD VLNRS+AE+G YP VDPL S SR+ D +E + ++ + R++ Sbjct: 319 ASTFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDARIIGEEHYETARAVQVTLQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 ALQDIIAILG 388 >gi|261856899|ref|YP_003264182.1| ATP synthase F1 subunit beta [Halothiobacillus neapolitanus c2] gi|261837368|gb|ACX97135.1| ATP synthase F1, beta subunit [Halothiobacillus neapolitanus c2] Length = 462 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 160/301 (53%), Gaps = 16/301 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPL 158 GR+++ LG PID GD++ + + + PP + Q + +TGI+VID+ P Sbjct: 84 GRIMDVLGHPIDN-----AGDVACDEKWSIHRKPPTFDEQANSTELLETGIKVIDLLCPF 138 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYL-GDNL 214 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + G L Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFAGVGERTREGNDFYHEMKDGGVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE+F +G +VL+ +D+I R+ + E++ G Sbjct: 199 DKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGRDVLMFIDNIYRYTLAGTEVSALLG 258 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 259 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 316 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP +DPL S SR D D V+ S+ + R++E +DI I Sbjct: 317 TVVLSRDIASLGIYPAIDPLDSTSRQLDPQVVGDTHYSVARSVQKTLQRYKELKDIIAIL 376 Query: 394 G 394 G Sbjct: 377 G 377 >gi|112791356|gb|ABI21948.1| ATP synthase beta subunit [Rahnella aquatilis] Length = 421 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + I P ++ +TGI+V+D+ P Sbjct: 58 ATLGRIMNVLGEPIDMKGEIGEEE-RRAIHRAAPSYEELANSQELLETGIKVMDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|77361904|ref|YP_341479.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas haloplanktis TAC125] gi|118573724|sp|Q3IK50|ATPB_PSEHT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|76876815|emb|CAI88037.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Pseudoalteromonas haloplanktis TAC125] Length = 461 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/332 (30%), Positives = 167/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G V + G ++ GR++N LG+PID +G+ D M Sbjct: 52 VVRTIAMGTTDGLRRGASVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEED-RMS 110 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I P + + +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 111 IHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 170 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + N L K +V +E P R LT +T+AE Sbjct: 171 EHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 230 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F +G +VL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 231 KFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--ASTK 288 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD- 362 G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 289 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDP 348 Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + + ++ R++E +DI I G Sbjct: 349 QVIGQEHYDTARGVQTVLQRYKELKDIIAILG 380 >gi|294505644|ref|YP_003569706.1| ATP synthase beta subunit protein [Yersinia pestis Z176003] gi|294356103|gb|ADE66444.1| ATP synthase beta subunit protein [Yersinia pestis Z176003] Length = 447 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + I + P + +TGI+V+D+ P Sbjct: 70 ATLGRIMNVLGEPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFA 128 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 129 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 188 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 189 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 248 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 249 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 306 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 307 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 366 >gi|218295778|ref|ZP_03496574.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermus aquaticus Y51MC23] gi|218243937|gb|EED10464.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermus aquaticus Y51MC23] Length = 478 Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/286 (31%), Positives = 153/286 (53%), Gaps = 16/286 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ S GR N +GKPIDG + + + I+ + R++ E+ +TGI ID Sbjct: 81 RLGVSKEMLGRRFNGIGKPIDGLPPITP-EKRLPIVGLPLNPVARRKPEEFIQTGISTID 139 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200 + L GQ++ +F+GSG+ + + + AR V+ + +G R Sbjct: 140 VMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQR 199 Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258 E+ FI+++ L +SV+ + +D+ I R + P A+T+AEY + + D +VL+IL Sbjct: 200 ELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTD 259 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +T + ++REI E+P RGYP ++++L + ER G + +KG++T + + + D Sbjct: 260 MTNYCEALREIGAAREEIPGRRGYPGYMYTDLATIYERAGVVQGKKGSVTQIPILSMPDD 319 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 + PI D I +G I L+R L +G YPP+DPL S+SRL + A Sbjct: 320 DRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNA 365 >gi|298400629|gb|ADI81634.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400631|gb|ADI81635.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400633|gb|ADI81636.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400635|gb|ADI81637.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400637|gb|ADI81638.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400639|gb|ADI81639.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400641|gb|ADI81640.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400643|gb|ADI81641.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400645|gb|ADI81642.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400647|gb|ADI81643.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400649|gb|ADI81644.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400651|gb|ADI81645.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400653|gb|ADI81646.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400655|gb|ADI81647.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400657|gb|ADI81648.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400659|gb|ADI81649.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400661|gb|ADI81650.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400663|gb|ADI81651.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400665|gb|ADI81652.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400667|gb|ADI81653.1| H+ transporting ATP synthase beta subunit [Heliconius melpomene melpomene] gi|298400669|gb|ADI81654.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400671|gb|ADI81655.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400673|gb|ADI81656.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400675|gb|ADI81657.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400677|gb|ADI81658.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400679|gb|ADI81659.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400681|gb|ADI81660.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400683|gb|ADI81661.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400685|gb|ADI81662.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400687|gb|ADI81663.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400689|gb|ADI81664.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400691|gb|ADI81665.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400693|gb|ADI81666.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400695|gb|ADI81667.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400697|gb|ADI81668.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400699|gb|ADI81669.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400701|gb|ADI81670.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400703|gb|ADI81671.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400705|gb|ADI81672.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400707|gb|ADI81673.1| H+ transporting ATP synthase beta subunit [Heliconius heurippa] gi|298400709|gb|ADI81674.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400711|gb|ADI81675.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400713|gb|ADI81676.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400715|gb|ADI81677.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400717|gb|ADI81678.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400719|gb|ADI81679.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400721|gb|ADI81680.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400723|gb|ADI81681.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400725|gb|ADI81682.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400727|gb|ADI81683.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400729|gb|ADI81684.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400731|gb|ADI81685.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400733|gb|ADI81686.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400735|gb|ADI81687.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400737|gb|ADI81688.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400739|gb|ADI81689.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400741|gb|ADI81690.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400743|gb|ADI81691.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400745|gb|ADI81692.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] gi|298400747|gb|ADI81693.1| H+ transporting ATP synthase beta subunit [Heliconius cydno cordula] Length = 352 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/282 (34%), Positives = 152/282 (53%), Gaps = 16/282 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D + I ++ P ++ ++ TGI+V+ Sbjct: 60 IRIPVGAETLGRIINVIGEPIDERGPI-PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVV 118 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 119 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 177 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 178 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 237 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 238 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 295 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD VL+R++AE G YP VDPL S SR+ D Sbjct: 296 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 337 >gi|238921743|ref|YP_002935258.1| F0F1 ATP synthase subunit beta [Edwardsiella ictaluri 93-146] gi|269140874|ref|YP_003297575.1| F0F1-type ATP synthase, beta subunit [Edwardsiella tarda EIB202] gi|259585444|sp|C5BF40|ATPB_EDWI9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|238871312|gb|ACR71023.1| ATP synthase subunit beta [Edwardsiella ictaluri 93-146] gi|267986535|gb|ACY86364.1| F0F1-type ATP synthase, beta subunit [Edwardsiella tarda EIB202] gi|304560632|gb|ADM43296.1| ATP synthase beta chain [Edwardsiella tarda FL6-60] Length = 460 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG P+D +G+ + I P + ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGDPVDMKGEIGEEE-RWAIHRAAPSYEDLSNSQELLETGIKVIDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|332533718|ref|ZP_08409577.1| ATP synthase beta chain [Pseudoalteromonas haloplanktis ANT/505] gi|332036882|gb|EGI73343.1| ATP synthase beta chain [Pseudoalteromonas haloplanktis ANT/505] Length = 461 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/332 (30%), Positives = 167/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + LV + G ++ GR++N LG+PID +G+ D M Sbjct: 52 VVRTIAMGTTDGLRRSALVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEED-RMS 110 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I P + + +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 111 IHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 170 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + N L K +V +E P R LT +T+AE Sbjct: 171 EHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 230 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F +G +VL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 231 KFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--ASTK 288 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD- 362 G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 289 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDP 348 Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + + ++ R++E +DI I G Sbjct: 349 QVIGQEHYDTARGVQTVLQRYKELKDIIAILG 380 >gi|112791368|gb|ABI21954.1| ATP synthase beta subunit [Brenneria rubrifaciens] Length = 416 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 157/301 (52%), Gaps = 16/301 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N LG+P+D KGD+ E I P ++ +TGI+VID+ P Sbjct: 59 GRIMNVLGEPVDM-----KGDIGEEECWPIHRSAPSYEELSNSQELLETGIKVIDLMCPF 113 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 114 AKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVI 173 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 174 DKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLG 233 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 234 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 291 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I Sbjct: 292 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSVLQRYQELKDIIAIL 351 Query: 394 G 394 G Sbjct: 352 G 352 >gi|55820567|ref|YP_139009.1| F0F1 ATP synthase subunit beta [Streptococcus thermophilus LMG 18311] gi|81820501|sp|Q5M5J1|ATPB_STRT2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|55736552|gb|AAV60194.1| H+-translocating ATPase beta subunit [Streptococcus thermophilus LMG 18311] Length = 468 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDMEAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERSREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|73748403|ref|YP_307642.1| F0F1 ATP synthase subunit beta [Dehalococcoides sp. CBDB1] gi|147669183|ref|YP_001214001.1| F0F1 ATP synthase subunit beta [Dehalococcoides sp. BAV1] gi|289432451|ref|YP_003462324.1| ATP synthase F1 subunit beta [Dehalococcoides sp. GT] gi|118573526|sp|Q3ZZT7|ATPB_DEHSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081331|sp|A5FRQ5|ATPB_DEHSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|73660119|emb|CAI82726.1| ATP synthase F1, beta subunit [Dehalococcoides sp. CBDB1] gi|146270131|gb|ABQ17123.1| ATP synthase F1 subcomplex beta subunit [Dehalococcoides sp. BAV1] gi|288946171|gb|ADC73868.1| ATP synthase F1, beta subunit [Dehalococcoides sp. GT] Length = 464 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D + K + +M I P + + +TGI+VID+ P G Sbjct: 85 LGRIFNVLGEALDNRGDV-KSEKTMPIHRLAPGMDELESSAQVLETGIKVIDLIAPFARG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG G+G+GK+ L+ R+ + S+ VGER RE + + L K+ Sbjct: 144 GKIGALGGAGVGKTVLIQELIRNIATEHEGFSVFAGVGERSREGNDLWHEMEDSGVLPKT 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P +R LT +T+AEYF + +VLL +D+I R+ + E++ G + Sbjct: 204 TMVFGQMNELPAVRLRIALTGLTMAEYFRDEERQDVLLFIDNIYRYTLAGMEVSALLGRM 263 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI +++ G+IT+ +V V D++ DP + LD I Sbjct: 264 PSAVGYQPTLATEMGALQERIASTKQ--GSITSFQAVYVPADDYTDPGVVATFGHLDAMI 321 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L RSLAE+ YP VDPLAS SR+ D +E K+ + ++ R+++ +D+ I G Sbjct: 322 ALERSLAEQALYPAVDPLASNSRILDPQVVGEEHYKVARDVQKVLQRYKDLQDVIAILG 380 >gi|325275312|ref|ZP_08141265.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. TJI-51] gi|324099560|gb|EGB97453.1| F0F1 ATP synthase subunit beta [Pseudomonas sp. TJI-51] Length = 458 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 102/332 (30%), Positives = 169/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G E + G D+V + GR+++ LG PID +G+ + Sbjct: 49 VVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGE-EERRG 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I P ++ +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 108 IHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAM 167 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + N L K +V +E P R LT +T+AE Sbjct: 168 EHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAE 227 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F +G++VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 228 KFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 +G+IT+V +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E + + +++ R++E +DI I G Sbjct: 346 NVIGNEHYETARGVQYVLQRYKELKDIIAILG 377 >gi|254501162|ref|ZP_05113313.1| ATP synthase F1, beta subunit [Labrenzia alexandrii DFL-11] gi|222437233|gb|EEE43912.1| ATP synthase F1, beta subunit [Labrenzia alexandrii DFL-11] Length = 474 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + D I + P + + + TGI+V+D+ P G Sbjct: 87 LGRIMNVIGEPVDEAGEIKHED-KRAIHQEAPEFVEQSTEAEILVTGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR----EFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYWEMIESGVNKE 204 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +TIAE F KG +VL +D+I RF + E+ Sbjct: 205 GGGEGSKAALVYGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V +V V D+ DP S Sbjct: 265 SALLGRIPSAVGYQPTLATDMGGMQERI--TTTHKGSITSVQAVYVPADDLTDPAPASTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRD 388 + LD VLNRS+AE+G YP VDPL S SR+ DE + + + R++ +D Sbjct: 323 AHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLSANIIGDEHYDTARAVQVTLQRYKALQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|221195082|ref|ZP_03568138.1| ATP synthase F1, beta subunit [Atopobium rimae ATCC 49626] gi|221184985|gb|EEE17376.1| ATP synthase F1, beta subunit [Atopobium rimae ATCC 49626] Length = 493 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 168/327 (51%), Gaps = 17/327 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GRV N +G+P+DG D+ + PA + F+TGI+ ID+ P G Sbjct: 111 GRVWNVMGQPVDGKPI--PDDVEYYPIHHPAPAFEELTTQTEVFETGIKAIDLLEPYVRG 168 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 + G+F G+G+GK+ L+ + + + VGER RE + ++E ++K+ Sbjct: 169 GKTGLFGGAGVGKTVLIQELINNLAQQHGGTSVFTGVGERTREGTDLYLEMTESGVIEKT 228 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L +T AEYF +G +VLL +D+I RF+ + E++ G +P Sbjct: 229 CLVYGQMNEPPGARMRVALAGLTTAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLGRMP 288 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD V Sbjct: 289 SAVGYQPTLATEMGELQERI--TSTKEGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 346 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396 L+RS+ E G YP VDPLAS S D + +E ++ ++ + + + +DI I Sbjct: 347 LSRSITELGIYPAVDPLASSSSALDPSIVGEEHYRVAMAVQETLQEYSDLQDIIAI---- 402 Query: 397 PGVDLILD---KAVHQVPIIYDFLKQS 420 G+D + + K V + I FL QS Sbjct: 403 LGMDELSEEQQKTVARARKIQQFLSQS 429 >gi|320166885|gb|EFW43784.1| ATP synthase subunit beta [Capsaspora owczarzaki ATCC 30864] Length = 544 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 104/329 (31%), Positives = 165/329 (50%), Gaps = 16/329 (4%) Query: 79 EEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 E ++ G L G P C GR++N +G+PID + + I + PP + Sbjct: 131 EGLTRGQLCLDLGNPIEIPVGPECLGRIMNVIGEPIDERGPI-NAKKKLPIHVEAPPFVE 189 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISL 194 ++ TGI+V+D+ P G +IG+F G+G+GK+ L+ + + + Sbjct: 190 MSTQQQILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAG 249 Query: 195 VGERGRE----VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-S 246 VGER RE E IE LG K +V +E P R LT +T+AEYF Sbjct: 250 VGERTREGNDLYHEMIESGVIQLGKPGSKVALVYGQMNEPPGARARVALTGLTVAEYFRD 309 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G +VLL +D+I RF + E++ G +P A GY ++ +++ + ERI + KG+ Sbjct: 310 EEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTRKGS 367 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT+V ++ V D+ DP + + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 368 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPRIV 427 Query: 367 ADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 E V+ ++ ++ ++ +DI I G Sbjct: 428 GQEHYDVARAVQKILQDYKSLQDIIAILG 456 >gi|319948457|ref|ZP_08022593.1| F0F1 ATP synthase subunit beta [Dietzia cinnamea P4] gi|319437877|gb|EFV92861.1| F0F1 ATP synthase subunit beta [Dietzia cinnamea P4] Length = 482 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 166/300 (55%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG D D+ G G D + + PPA ++ + + +TG++VID+ TP Sbjct: 104 GHVFNALG---DCLDAPGTGRDGEQWGIHREPPAFDQLEGKTEILETGVKVIDLLTPYVK 160 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ Sbjct: 161 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQD 220 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF +G +VLL +D+I RF + E++T G Sbjct: 221 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGR 280 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 281 MPSAVGYQPTLADEMGQLQERITSTRGR--SITSLQAIYVPADDYTDPAPATTFAHLDAT 338 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+A +G YP VDPL S SR+ + +E ++ + ++ +++E +DI I G Sbjct: 339 TELSRSIASKGIYPAVDPLTSTSRILEPGIVGEEHYRVAQEVIRILQKYKELQDIIAILG 398 >gi|331703817|ref|YP_004400504.1| ATP synthase beta chain [Mycoplasma mycoides subsp. capri LC str. 95010] gi|256384194|gb|ACU78764.1| ATP synthase F1, beta subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|256385026|gb|ACU79595.1| ATP synthase F1, beta subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|296455506|gb|ADH21741.1| ATP synthase F1, beta subunit [synthetic Mycoplasma mycoides JCVI-syn1.0] gi|328802372|emb|CBW54527.1| ATP synthase beta chain [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 475 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 108/305 (35%), Positives = 159/305 (52%), Gaps = 18/305 (5%) Query: 68 DIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSM 126 +IV +G E + G V + +P+ GR+ N LG PID L D+ Sbjct: 62 EIVRTIAMGPTEGLKRGLDVINTNSPITAPTGIEVLGRMFNVLGDPIDEKPDL---DVKR 118 Query: 127 EIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-- 183 E + K P + +TGI+VID+ P G ++G+F G+G+GK+ L+ Sbjct: 119 EPIHKDAPKYEELVTTTEILETGIKVIDLMIPFTKGGKVGLFGGAGVGKTILIQELINNI 178 Query: 184 SDCFDKV-IISLVGERGRE----VREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238 + + V + + VGER RE EFIE + L K+ +V +E P R LT Sbjct: 179 AKAHNGVSVFAGVGERTREGNDLYHEFIEAGV---LNKTCLVFGQMNEPPGARMRVALTG 235 Query: 239 VTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 +TIAEYF K +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI Sbjct: 236 LTIAEYFRDQKNMDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI 295 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 + + G+IT+V +V V D+ DP + + LD IVL+RS+A G YP VDPLAS Sbjct: 296 --TSTKNGSITSVQAVYVPADDLTDPAPATTFTHLDARIVLDRSIASLGIYPAVDPLASS 353 Query: 358 SRLAD 362 SR+ D Sbjct: 354 SRVLD 358 >gi|153008439|ref|YP_001369654.1| F0F1 ATP synthase subunit beta [Ochrobactrum anthropi ATCC 49188] gi|190358689|sp|A6WXX1|ATPB_OCHA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|151560327|gb|ABS13825.1| ATP synthase F1, beta subunit [Ochrobactrum anthropi ATCC 49188] Length = 517 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 159/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K I + P + + + TGI+V+D+ P G Sbjct: 130 LGRIMNVIGEPVDEAGPI-KTTARRAIHQEAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 188 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 189 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 247 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R L+ +T+AE F KG +VL +D+I RF + E+ Sbjct: 248 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDKGQDVLFFVDNIFRFTQAGSEL 307 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 308 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 365 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD LNRS+AE+G YP VDPL S SR+ D +E V+ + ++ R++ +D Sbjct: 366 AHLDATTTLNRSIAEKGIYPAVDPLESTSRMLDPMIVGEEHYAVARQVQSILQRYKSLQD 425 Query: 389 IRLIGG 394 I I G Sbjct: 426 IIAILG 431 >gi|255320598|ref|ZP_05361775.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SK82] gi|262380769|ref|ZP_06073922.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SH164] gi|255302214|gb|EET81454.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SK82] gi|262297717|gb|EEY85633.1| ATP synthase F1, beta subunit [Acinetobacter radioresistens SH164] Length = 464 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 17/309 (5%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 +AC GR+++ LG+PID + + + I + P + +TGI+VID+ P Sbjct: 80 TACL-GRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCP 137 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSN 196 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSI 266 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 197 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAG 256 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 257 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPA 314 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD +VL+R +A G YP +DPL S SR D E ++ S+ +++ R++E Sbjct: 315 TTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKE 374 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 375 LKDIIAILG 383 >gi|112791358|gb|ABI21949.1| ATP synthase beta subunit [Yersinia enterocolitica] Length = 421 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I + P + + +TGI+V+D+ P G Sbjct: 60 LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKG 118 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|26992088|ref|NP_747513.1| F0F1 ATP synthase subunit beta [Pseudomonas putida KT2440] gi|148550495|ref|YP_001270597.1| F0F1 ATP synthase subunit beta [Pseudomonas putida F1] gi|81439305|sp|Q88BX4|ATPB_PSEPK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166990374|sp|A5WBA3|ATPB_PSEP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|24987230|gb|AAN70977.1|AE016742_6 ATP synthase F1, beta subunit [Pseudomonas putida KT2440] gi|148514553|gb|ABQ81413.1| ATP synthase F1, beta subunit [Pseudomonas putida F1] gi|313496403|gb|ADR57769.1| AtpB [Pseudomonas putida BIRD-1] Length = 458 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 102/332 (30%), Positives = 169/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G E + G D+V + GR+++ LG PID +G+ + Sbjct: 49 VVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGE-EERRG 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I P ++ +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 108 IHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAM 167 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + N L K +V +E P R LT +T+AE Sbjct: 168 EHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAE 227 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F +G++VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 228 KFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 +G+IT+V +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E + + +++ R++E +DI I G Sbjct: 346 NVIGNEHYETARGVQYVLQRYKELKDIIAILG 377 >gi|303252037|ref|ZP_07338207.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307248695|ref|ZP_07530708.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302649101|gb|EFL79287.1| F0F1 ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306854622|gb|EFM86812.1| ATP synthase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 457 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEKGPIGE-EARWNIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376 >gi|304313401|ref|YP_003812999.1| F1-ATP synthase, beta subunit [gamma proteobacterium HdN1] gi|301799134|emb|CBL47377.1| F1-ATP synthase, beta subunit [gamma proteobacterium HdN1] Length = 459 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 158/298 (53%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG ID +G+ + + I K P + + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNAIDEAGPIGEQERA-SIHRKSPTFAEQAASNELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + S LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP +DPL S SR D DE V+ + ++ R++E +DI I G Sbjct: 320 LSRDIAAKGIYPAIDPLDSTSRQLDPLVIGDEHYTVARGVQTVLQRYKELKDIIAILG 377 >gi|223041784|ref|ZP_03611975.1| FOF1 ATP synthase subunit beta [Actinobacillus minor 202] gi|240950011|ref|ZP_04754319.1| F0F1 ATP synthase subunit beta [Actinobacillus minor NM305] gi|223017410|gb|EEF15830.1| FOF1 ATP synthase subunit beta [Actinobacillus minor 202] gi|240295489|gb|EER46232.1| F0F1 ATP synthase subunit beta [Actinobacillus minor NM305] Length = 457 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + +I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEKGPIGEEE-RWDIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376 >gi|113461832|ref|YP_719901.1| F0F1 ATP synthase subunit beta [Haemophilus somnus 129PT] gi|123327497|sp|Q0I5X3|ATPB_HAES1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|112823875|gb|ABI25964.1| ATP synthase F1 subcomplex beta subunit [Haemophilus somnus 129PT] Length = 457 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEKGEIG-AEETWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|55822457|ref|YP_140898.1| F0F1 ATP synthase subunit beta [Streptococcus thermophilus CNRZ1066] gi|116627376|ref|YP_819995.1| F0F1 ATP synthase subunit beta [Streptococcus thermophilus LMD-9] gi|81820338|sp|Q5M104|ATPB_STRT1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|122268023|sp|Q03LX3|ATPB_STRTD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|20070093|gb|AAM01190.1| H+-ATPase cytoplasmic F1-part beta-subunit [Streptococcus thermophilus] gi|55738442|gb|AAV62083.1| proton-translocating ATPase, beta subunit [Streptococcus thermophilus CNRZ1066] gi|116100653|gb|ABJ65799.1| F0F1-type ATP synthase, beta subunit [Streptococcus thermophilus LMD-9] gi|312277889|gb|ADQ62546.1| Proton-translocating ATPase beta subunit [Streptococcus thermophilus ND03] Length = 468 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDMEAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERSREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|239917343|ref|YP_002956901.1| ATP synthase, F1 beta subunit [Micrococcus luteus NCTC 2665] gi|281414177|ref|ZP_06245919.1| F0F1 ATP synthase subunit beta [Micrococcus luteus NCTC 2665] gi|239838550|gb|ACS30347.1| ATP synthase, F1 beta subunit [Micrococcus luteus NCTC 2665] Length = 485 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 159/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG+ +D S + + I P + + + +TGI+VID+ TP G Sbjct: 105 GHIFNVLGETLDMPTSQLQAEDRWPIHRPAPNFASLEGSTEMLETGIKVIDLLTPYIKGG 164 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E D LK + Sbjct: 165 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMDEADVLKDTA 224 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF+ + E++T G +P Sbjct: 225 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRMP 284 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ +V V D++ DP +V + LD Sbjct: 285 SAVGYQPNLADEMGVLQERI--TSTRGHSITSMQAVYVPADDYTDPAPANVFAHLDATTN 342 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L R LA G YP VDPLAS SR+ D + E V+ + ++ + +E +DI I G Sbjct: 343 LTRDLASRGLYPAVDPLASTSRILDPQYVGQEHYDVAIRVKQILQKNKELQDIIAILG 400 >gi|210623313|ref|ZP_03293730.1| hypothetical protein CLOHIR_01680 [Clostridium hiranonis DSM 13275] gi|210153714|gb|EEA84720.1| hypothetical protein CLOHIR_01680 [Clostridium hiranonis DSM 13275] Length = 464 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 155/299 (51%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG +D L +G M I + P + + +TGI+V+D+ P G Sbjct: 88 LGRVFNVLGNAVDRKGEL-EGVERMPIHRQSPDFDELETHAEILETGIKVVDLLAPYLKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + IS+ VGER RE + ++ L K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYQEMTESGVLSKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARMRVALTGLTMAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 267 PSAVGYQPTLATEMGALQERI--TSTKDGSITSVQAVYVPADDLTDPAPATTFSHLDAKT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++ +G YP VDPL S SR+ D +E K + ++ R+ E +DI I G Sbjct: 325 VLSRQISSQGIYPAVDPLESTSRVLDPKIVGEEHYKTAREVQSILQRYRELQDIIAILG 383 >gi|288817497|ref|YP_003431844.1| F0F1-type ATP synthase beta subunit [Hydrogenobacter thermophilus TK-6] gi|288786896|dbj|BAI68643.1| F0F1-type ATP synthase beta subunit [Hydrogenobacter thermophilus TK-6] gi|308751104|gb|ADO44587.1| ATP synthase F1, beta subunit [Hydrogenobacter thermophilus TK-6] Length = 473 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 166/312 (53%), Gaps = 13/312 (4%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGI 149 G ++ GR+ N +G+PID + D M + PP + Q + + +TGI Sbjct: 82 GPIKVPVGRATLGRIFNVVGQPIDEAGEVKAEDYWP--MFREPPPLEEQSTKVEILETGI 139 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-FDK---VIISLVGERGREVREF 205 +V+D+ P G ++G+F G+G+GK+ L+ + F K V+I VGER RE + Sbjct: 140 KVVDLLEPYVKGGKVGLFGGAGVGKTVLMQELIHNIAKFHKGFSVVIG-VGERTREGNDL 198 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + L +V+V +E P +R T +T+AEYF +G +VL+ +D+I RF Sbjct: 199 WHEMKESGVLPYTVMVYGQMNEPPGVRFRVAQTGITMAEYFRDVEGQDVLVFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++T G LP A GY ++ +++ + ERI + +KG++T++ +V V D+ DP Sbjct: 259 QAGSEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TSTKKGSLTSIQAVYVPADDITDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 SV + LD VL R LAE G YP VDPL S S+ + +E V+ + ++ R Sbjct: 317 APYSVFAHLDATTVLARRLAELGIYPAVDPLESTSKYLAPEFVGEEHYTVAMEVKRILQR 376 Query: 383 FEETRDIRLIGG 394 ++E ++I I G Sbjct: 377 YKELQEIIAILG 388 >gi|170293987|gb|ACB13087.1| ATP synthase beta subunit [Micromonas sp. SYD] Length = 366 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 159/305 (52%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 22 GRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 80 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ L+ + +S+ VGER RE + ++ N+ Sbjct: 81 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYQEMCESNVINQKN 140 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 141 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFVDNIFRFVQAGSEVS 200 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 201 ALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFA 258 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R +AE G YP VDPL S SR+ DE + L+ R++E +DI Sbjct: 259 HLDATTVLSRKIAELGIYPAVDPLDSTSRILTAEILGDEHYNCAQRVKELLQRYKELQDI 318 Query: 390 RLIGG 394 I G Sbjct: 319 IAILG 323 >gi|145630340|ref|ZP_01786121.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021] gi|145632746|ref|ZP_01788480.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 3655] gi|145634523|ref|ZP_01790232.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittAA] gi|145636253|ref|ZP_01791922.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittHH] gi|145640453|ref|ZP_01796037.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021] gi|148825242|ref|YP_001289995.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittEE] gi|229846566|ref|ZP_04466674.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 7P49H1] gi|260582255|ref|ZP_05850048.1| ATP synthase F1, beta subunit [Haemophilus influenzae NT127] gi|166201709|sp|A5UA11|ATPB_HAEIE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|144984075|gb|EDJ91512.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae R3021] gi|144986941|gb|EDJ93493.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 3655] gi|145268068|gb|EDK08063.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittAA] gi|145270418|gb|EDK10352.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittHH] gi|145275039|gb|EDK14901.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.4-21] gi|148715402|gb|ABQ97612.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittEE] gi|229810659|gb|EEP46377.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 7P49H1] gi|260094623|gb|EEW78518.1| ATP synthase F1, beta subunit [Haemophilus influenzae NT127] gi|309972365|gb|ADO95566.1| Membrane-bound ATP synthase, F1 sector, beta-subunit [Haemophilus influenzae R2846] Length = 457 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID ++G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|319898003|ref|YP_004136200.1| f1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus influenzae F3031] gi|317433509|emb|CBY81892.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus influenzae F3031] Length = 457 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID ++G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|212712645|ref|ZP_03320773.1| hypothetical protein PROVALCAL_03740 [Providencia alcalifaciens DSM 30120] gi|212684861|gb|EEB44389.1| hypothetical protein PROVALCAL_03740 [Providencia alcalifaciens DSM 30120] Length = 460 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P + +TGI+V+D+ Sbjct: 83 ATLGRIMNVLGEPIDM-----KGDIGEEERWSIHRAAPSYEELANSTELLETGIKVMDLI 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|112791388|gb|ABI21964.1| ATP synthase beta subunit [Pectobacterium cacticida] Length = 421 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+P+D KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPVDM-----KGDIGEEERWAIHRPAPTYEELSNSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|325273538|ref|ZP_08139770.1| flagellum-specific ATP synthase [Pseudomonas sp. TJI-51] gi|324101331|gb|EGB98945.1| flagellum-specific ATP synthase [Pseudomonas sp. TJI-51] Length = 283 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 87/210 (41%), Positives = 126/210 (60%), Gaps = 7/210 (3%) Query: 70 VYICPVGIGEEISLGDLVFHW---GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 V++ PVG I+ G V GR + S GRV++ G+ +DG + K + + Sbjct: 77 VFLMPVGSIVGIAPGARVVPLDDGGRLPMGMS--MLGRVLDGAGRALDGKGGM-KAEDWV 133 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + V +NR + K GIR I+ + GQR+G+FAG+G+GKS LL M R Sbjct: 134 PMDGPVINPLNRDPISKPLDVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTE 193 Query: 187 FDKVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 + +++ L+GERGREV+EFIE LG + LK+SVVV + +D++P++R A + IAEYF Sbjct: 194 AEIIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYF 253 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGE 275 KG NVLL++DS+TRFA + REIA GE Sbjct: 254 RDKGKNVLLLMDSLTRFAQAQREIALAIGE 283 >gi|238922550|ref|YP_002936063.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656] gi|238874222|gb|ACR73929.1| F0F1 ATP synthase subunit beta [Eubacterium rectale ATCC 33656] gi|291526387|emb|CBK91974.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale DSM 17629] gi|291526832|emb|CBK92418.1| ATP synthase F1 subcomplex beta subunit [Eubacterium rectale M104/1] Length = 463 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PID + + + I P + ++ +TGI+V+D+ P G Sbjct: 89 LGRMFNVLGEPID-EVEPPQTEEKWAIHRPAPSFEEQATSQEMLETGIKVVDLLCPYQKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + + VGER RE + + E + K+ Sbjct: 148 GKIGLFGGAGVGKTVLIQELIHNIATQHGGYSVFTGVGERTREGNDLYYEMKESGVIDKT 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 208 TMVFGQMNEPPGARMRVALAGLTMAEYFRDRGGKDVLLFVDNIFRFTQAGSEVSALLGRM 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 268 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATT 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL RS+AE G YP VDPLAS SR+ D E ++ ++ ++ +++E +DI I G Sbjct: 326 VLERSIAELGIYPAVDPLASTSRILDPRIVGQEHFEVAHAVQEILQKYKELQDIIAILG 384 >gi|89574047|gb|ABD77249.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Balaenoptera physalus] Length = 410 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 163/314 (51%), Gaps = 17/314 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 RI GR++N +G+PID + L K I ++ P M ++ TGI+V+D Sbjct: 37 RIPVGPETLGRIMNVIGEPID-ERGLIKTKQFAAIHAEAPEFMEMSVEQEILVTGIKVVD 95 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205 + P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 96 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEM 154 Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I R Sbjct: 155 IESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 214 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 215 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLT 272 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ Sbjct: 273 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKIL 332 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 333 QDYKSLQDIIAILG 346 >gi|315128169|ref|YP_004070172.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas sp. SM9913] gi|315016682|gb|ADT70020.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas sp. SM9913] Length = 461 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 102/332 (30%), Positives = 168/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G V + G ++ GR++N LG+PID +G+ D M Sbjct: 52 VVRTIALGTTDGLRRGAAVANTGEAIQVPVGTKTLGRIMNVLGEPIDEAGPIGE-DERMS 110 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I P + + +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 111 IHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 170 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + N L K +V +E P R LT +T+AE Sbjct: 171 EHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 230 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F +G +VL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 231 KFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--ASTK 288 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 289 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDP 348 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E + + ++ R++E +DI I G Sbjct: 349 QVIGEEHYGIARGVQTVLQRYKELKDIIAILG 380 >gi|16272426|ref|NP_438639.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae Rd KW20] gi|68249081|ref|YP_248193.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 86-028NP] gi|145628859|ref|ZP_01784659.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.1-21] gi|145638605|ref|ZP_01794214.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittII] gi|229844360|ref|ZP_04464500.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 6P18H1] gi|260580457|ref|ZP_05848285.1| ATP synthase F1, beta subunit [Haemophilus influenzae RdAW] gi|319775594|ref|YP_004138082.1| F1 sector of membrane-bound ATP synthase subunit beta [Haemophilus influenzae F3047] gi|329122360|ref|ZP_08250947.1| ATP synthase F1 sector beta subunit [Haemophilus aegyptius ATCC 11116] gi|2506208|sp|P43715|ATPB_HAEIN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81336513|sp|Q4QN64|ATPB_HAEI8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|1573457|gb|AAC22137.1| ATP synthase F1, subunit beta (atpD) [Haemophilus influenzae Rd KW20] gi|68057280|gb|AAX87533.1| ATP synthase beta chain [Haemophilus influenzae 86-028NP] gi|144979329|gb|EDJ89015.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 22.1-21] gi|145272200|gb|EDK12108.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae PittII] gi|229812609|gb|EEP48298.1| F0F1 ATP synthase subunit beta [Haemophilus influenzae 6P18H1] gi|260092799|gb|EEW76734.1| ATP synthase F1, beta subunit [Haemophilus influenzae RdAW] gi|301169199|emb|CBW28796.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus influenzae 10810] gi|309750106|gb|ADO80090.1| Membrane-bound ATP synthase, F1 sector, beta-subunit [Haemophilus influenzae R2866] gi|317450185|emb|CBY86401.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus influenzae F3047] gi|327473642|gb|EGF19061.1| ATP synthase F1 sector beta subunit [Haemophilus aegyptius ATCC 11116] Length = 457 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID ++G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|112791374|gb|ABI21957.1| ATP synthase beta subunit [Brenneria salicis ATCC 15712] Length = 421 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+P+D KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGEPVDM-----KGDIGEEERWAIHRAAPTYEELSSSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|52426401|ref|YP_089538.1| F0F1 ATP synthase subunit beta [Mannheimia succiniciproducens MBEL55E] gi|81825450|sp|Q65Q07|ATPB_MANSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|52308453|gb|AAU38953.1| AtpD protein [Mannheimia succiniciproducens MBEL55E] Length = 458 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 156/297 (52%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+P+D +G + I + P + + +TGI+VID+ P G Sbjct: 84 GRIMNVLGEPVDEQGPIG-AEEEWAIHREAPSYEEQSNSTELLETGIKVIDLICPFAKGG 142 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMTDSNVLDKVS 202 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 203 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 262 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 263 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 320 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R++A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 321 SRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 377 >gi|193211720|ref|YP_001997673.1| F0F1 ATP synthase subunit beta [Chlorobaculum parvum NCIB 8327] gi|1168573|sp|P42465|ATPB_CHLP8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|560823|emb|CAA54200.1| ATPase beta-subunit [Prosthecochloris vibrioformis] gi|193085197|gb|ACF10473.1| ATP synthase F1, beta subunit [Chlorobaculum parvum NCIB 8327] Length = 462 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 164/315 (52%), Gaps = 10/315 (3%) Query: 87 VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145 V + GR +P A GR++N +G+PIDG + S I P + F Sbjct: 70 VANTGRPIQAPVGAEVLGRMLNVVGEPIDGKGPV-PSKKSYPIHRSAPKFDELSTKAEMF 128 Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREV 202 +TGI+VID+ P G + G+F G+G+GK+ L+ + ++ + + VGER RE Sbjct: 129 ETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKEQSGYSVFAGVGERTREG 188 Query: 203 REFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 + + + + K+ +V +E P R LT ++IAEYF +G +VLL +D+I Sbjct: 189 NDLWHEMMESGVIDKTALVFGQMNEPPGARARVALTGLSIAEYFRDEEGRDVLLFIDNIF 248 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +E+ L +RI +KG++T+V ++ V D+ Sbjct: 249 RFTQAGAEVSALLGRMPSAVGYQPTLGTEMGELQDRI--VSTKKGSVTSVQAIYVPADDL 306 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR+ D D ++ + Sbjct: 307 TDPAPATAFTHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPNIIGNDHYDTAQAVKQI 366 Query: 380 IHRFEETRDIRLIGG 394 + R+++ +DI I G Sbjct: 367 LQRYKDLQDIIAILG 381 >gi|262371347|ref|ZP_06064665.1| membrane-bound ATP synthase [Acinetobacter johnsonii SH046] gi|262313684|gb|EEY94733.1| membrane-bound ATP synthase [Acinetobacter johnsonii SH046] Length = 464 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 161/307 (52%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + + I + P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDEAGPVAT-EARLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETR 387 + LD +VL+R +A G YP +DPL S SR D A+ ++ S+ +++ R++E + Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGAEHYEIARSVQNVLQRYKELK 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|325291354|ref|YP_004267535.1| ATP synthase F1 subcomplex beta subunit [Syntrophobotulus glycolicus DSM 8271] gi|324966755|gb|ADY57534.1| ATP synthase F1 subcomplex beta subunit [Syntrophobotulus glycolicus DSM 8271] Length = 467 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LGK ID + G I K P +++ + +TGI+V+D+ P G Sbjct: 88 LGRMVNVLGKAIDNLPEIDSGK-KYPIHRKAPKYVDQMTTDTILETGIKVVDLLAPYAKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + K Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIATQHGGLSVFAGVGERTREGNDLWNEMKESGVISKM 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 AMVFGQMNEPPGARLRVALSGLTMAEYFRDDQGQDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGNLQERI--TSTKKGSITSVQAIYVPADDLTDPAPATAFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++ E G YP VDPL S S+ L A+ ++ + ++ R++E +DI I G Sbjct: 325 VLSRAITEIGIYPAVDPLDSTSQLLTPNIVGAEHYEVARGVQIILQRYKELQDIIAILG 383 >gi|262363809|gb|ACY60530.1| ATP synthase beta subunit protein [Yersinia pestis D106004] gi|262367745|gb|ACY64302.1| ATP synthase beta subunit protein [Yersinia pestis D182038] Length = 435 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + I + P + +TGI+V+D+ P Sbjct: 58 ATLGRIMNVLGEPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|254498170|ref|ZP_05110920.1| hypothetical protein LDG_2536 [Legionella drancourtii LLAP12] gi|254352609|gb|EET11394.1| hypothetical protein LDG_2536 [Legionella drancourtii LLAP12] Length = 445 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+P+D D D I K P + ++ +TGI+VID+ P G Sbjct: 70 LGRIMDVLGRPVD-DAGPIDADEHWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKG 128 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 129 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 188 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 189 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGVEVSALLGRMP 248 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 249 SAVGYQPTLAEEMGMLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 306 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR D E + + R++E +DI I G Sbjct: 307 LSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHYDTARRVQQTLQRYKELKDIIAILG 364 >gi|242371594|ref|ZP_04817168.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis M23864:W1] gi|242350661|gb|EES42262.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis M23864:W1] Length = 470 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID D+ + I + P + +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFDELSTKVEILETGIKVVDLLAPYI 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ + Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVI 205 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 KKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 265 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI S KG++T++ +V V D++ DP + + LD Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQAVFVPADDYTDPAPATTFAHLD 323 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR + + E V+ + + ++ E +DI I Sbjct: 324 ATTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYDVAREVQSTLQKYRELQDIIAI 383 Query: 393 GG 394 G Sbjct: 384 LG 385 >gi|123444373|ref|YP_001008338.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp. enterocolitica 8081] gi|166222426|sp|A1JTC6|ATPB_YERE8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|122091334|emb|CAL14220.1| ATP synthase beta subunit protein [Yersinia enterocolitica subsp. enterocolitica 8081] gi|330861780|emb|CBX71953.1| ATP synthase subunit beta [Yersinia enterocolitica W22703] Length = 460 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I + P + + +TGI+V+D+ P G Sbjct: 85 LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 144 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 204 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 263 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 264 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 321 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 322 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|303232571|ref|ZP_07319257.1| ATP synthase F1, beta subunit [Atopobium vaginae PB189-T1-4] gi|302481358|gb|EFL44432.1| ATP synthase F1, beta subunit [Atopobium vaginae PB189-T1-4] Length = 492 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 160/298 (53%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GRV N +G+P+DG + D+ + PA + + F+TGI+ ID+ P G Sbjct: 112 GRVWNVMGQPVDGKEI--PDDVKYYPIHHPAPAFDELTTQTEIFETGIKAIDLLEPYVRG 169 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 + G+F G+G+GK+ L+ + + + + VGER RE + ++E + K+ Sbjct: 170 GKTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMKESGVIDKT 229 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L +T AEYF +G +VLL +D+I RF+ + E++ G +P Sbjct: 230 CLVYGQMNEPPGARLRVGLAGLTTAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLGRMP 289 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD V Sbjct: 290 SAVGYQPTLATEMGDLQERI--TSTKEGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 347 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++ E G YP VDPLAS S D + +E ++ ++ ++ ++ + +DI I G Sbjct: 348 LSRAITELGIYPAVDPLASSSSALDPSVVGEEHYRVAMAVQEILQQYSDLQDIIAILG 405 >gi|257454338|ref|ZP_05619601.1| ATP synthase F1, beta subunit [Enhydrobacter aerosaccus SK60] gi|257448241|gb|EEV23221.1| ATP synthase F1, beta subunit [Enhydrobacter aerosaccus SK60] Length = 466 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 161/305 (52%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID + + + I + P + + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPIDEAGPVEHSN-TWAIHREAPSYDEQSNSTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTQSGSITSVQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A +G YP VDPL S SR D +E V+ + ++ RF+E +DI Sbjct: 319 HLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPLVIGEEHYAVARGVQEVLQRFKELKDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|283046836|ref|NP_001164361.1| ATP synthase subunit beta, mitochondrial [Tribolium castaneum] gi|270009266|gb|EFA05714.1| hypothetical protein TcasGA2_TC015322 [Tribolium castaneum] Length = 518 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + L+ I ++ P + ++ TGI+V+ Sbjct: 122 IRIPVGAETLGRIINVIGEPIDERGPVPTDKLA-PIHAEAPEFVEMSVEQEILVTGIKVV 180 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 181 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 239 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 240 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 299 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 300 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 357 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 358 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 417 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 418 LQDYKSLQDIIAILG 432 >gi|46579188|ref|YP_009996.1| F0F1 ATP synthase subunit beta [Desulfovibrio vulgaris str. Hildenborough] gi|120603238|ref|YP_967638.1| F0F1 ATP synthase subunit beta [Desulfovibrio vulgaris DP4] gi|81830486|sp|Q72E04|ATPB_DESVH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166201699|sp|A1VFJ5|ATPB_DESVV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|46448601|gb|AAS95255.1| ATP synthase, F1 beta subunit [Desulfovibrio vulgaris str. Hildenborough] gi|120563467|gb|ABM29211.1| ATP synthase F1 subcomplex beta subunit [Desulfovibrio vulgaris DP4] gi|311233026|gb|ADP85880.1| ATP synthase F1, beta subunit [Desulfovibrio vulgaris RCH1] Length = 470 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 159/303 (52%), Gaps = 13/303 (4%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR++N +G+P+D LG D S+ I P + + +TGI+V+D+ P Sbjct: 89 ASLGRIMNVVGRPVD---ELGPINADKSLPIHRAAPEFTEQNTKVELLETGIKVVDLLIP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ +L + IS+ VGER RE + + Sbjct: 146 FPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGV 205 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272 L+K+ ++ +E P R LTA+ AEYF + +VLL +D+I RF + E++ Sbjct: 206 LEKAALIYGQMNEPPGARARVALTALACAEYFRDVENQDVLLFVDNIFRFTQAGSEVSAL 265 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + S L Sbjct: 266 LGRMPSAVGYQPTLGTDLGALQERI--TSTTKGSITSVQAVYVPADDLTDPAPATTFSHL 323 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391 DG +VL+R +AE G YP VDPL S SR+ D + + + ++ ++++ +DI Sbjct: 324 DGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGVEHYGVARQVQQVLQKYKDLQDIIA 383 Query: 392 IGG 394 I G Sbjct: 384 ILG 386 >gi|325981216|ref|YP_004293618.1| ATP synthase F1, beta subunit [Nitrosomonas sp. AL212] gi|325530735|gb|ADZ25456.1| ATP synthase F1, beta subunit [Nitrosomonas sp. AL212] Length = 459 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID +G + M I + P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPIDEMGDIG-AEQHMSIHREAPAFDELAASTELLETGIKVIDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESKVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 262 SAVGYQPTLAEEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E ++ + R++E RDI I G Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYNTARAVQQTLQRYKELRDIIAILG 377 >gi|209559136|ref|YP_002285608.1| F0F1 ATP synthase subunit beta [Streptococcus pyogenes NZ131] gi|226740684|sp|B5XKQ1|ATPB_STRPZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|209540337|gb|ACI60913.1| ATP synthase beta chain [Streptococcus pyogenes NZ131] Length = 468 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 158/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID ++ + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVESQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR L+ + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|112791352|gb|ABI21946.1| ATP synthase beta subunit [Erwinia americana] gi|112791354|gb|ABI21947.1| ATP synthase beta subunit [Hafnia alvei] Length = 421 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + I P ++ +TGI+V+D+ P Sbjct: 58 ATLGRIMNVLGEPIDMKGEIGEEE-RRAIHRPAPSYEELANSQELLETGIKVMDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGALQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|22128003|ref|NP_671426.1| F0F1 ATP synthase subunit beta [Yersinia pestis KIM 10] gi|45443751|ref|NP_995290.1| F0F1 ATP synthase subunit beta [Yersinia pestis biovar Microtus str. 91001] gi|51598251|ref|YP_072442.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis IP 32953] gi|108810156|ref|YP_654072.1| F0F1 ATP synthase subunit beta [Yersinia pestis Antiqua] gi|108814138|ref|YP_649905.1| F0F1 ATP synthase subunit beta [Yersinia pestis Nepal516] gi|145601152|ref|YP_001165228.1| F0F1 ATP synthase subunit beta [Yersinia pestis Pestoides F] gi|150260945|ref|ZP_01917673.1| ATP synthase beta subunit protein [Yersinia pestis CA88-4125] gi|153948511|ref|YP_001403118.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis IP 31758] gi|162421072|ref|YP_001608472.1| F0F1 ATP synthase subunit beta [Yersinia pestis Angola] gi|165926118|ref|ZP_02221950.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165939967|ref|ZP_02228504.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166009572|ref|ZP_02230470.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166213362|ref|ZP_02239397.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167401612|ref|ZP_02307106.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422841|ref|ZP_02314594.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167425526|ref|ZP_02317279.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026430|ref|YP_001722935.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis YPIII] gi|186897468|ref|YP_001874580.1| F0F1 ATP synthase subunit beta [Yersinia pseudotuberculosis PB1/+] gi|218931097|ref|YP_002348972.1| F0F1 ATP synthase subunit beta [Yersinia pestis CO92] gi|229839830|ref|ZP_04459989.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229841915|ref|ZP_04462071.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229896792|ref|ZP_04511955.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia pestis Pestoides A] gi|229904681|ref|ZP_04519792.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia pestis Nepal516] gi|270488391|ref|ZP_06205465.1| ATP synthase F1, beta subunit [Yersinia pestis KIM D27] gi|81825677|sp|Q663Q8|ATPB_YERPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573782|sp|Q1C095|ATPB_YERPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|122979850|sp|Q1CCH5|ATPB_YERPN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|123776436|sp|Q7CFM8|ATPB_YERPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166222427|sp|A4TSJ3|ATPB_YERPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166990376|sp|A7FPE0|ATPB_YERP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740695|sp|B2K847|ATPB_YERPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740696|sp|A9R5T9|ATPB_YERPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740697|sp|B1JRN2|ATPB_YERPY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21961151|gb|AAM87677.1|AE014015_2 membrane-bound ATP synthase, F1 sector, beta-subunit [Yersinia pestis KIM 10] gi|45438621|gb|AAS64167.1| ATP synthase beta subunit protein [Yersinia pestis biovar Microtus str. 91001] gi|51591533|emb|CAH23205.1| ATP synthase beta subunit protein [Yersinia pseudotuberculosis IP 32953] gi|108777786|gb|ABG20305.1| ATP synthase beta subunit protein [Yersinia pestis Nepal516] gi|108782069|gb|ABG16127.1| ATP synthase beta subunit protein [Yersinia pestis Antiqua] gi|115349708|emb|CAL22689.1| ATP synthase beta subunit protein [Yersinia pestis CO92] gi|145212848|gb|ABP42255.1| ATP synthase beta subunit protein [Yersinia pestis Pestoides F] gi|149290353|gb|EDM40430.1| ATP synthase beta subunit protein [Yersinia pestis CA88-4125] gi|152960006|gb|ABS47467.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis IP 31758] gi|162353887|gb|ABX87835.1| ATP synthase F1, beta subunit [Yersinia pestis Angola] gi|165912093|gb|EDR30733.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165921978|gb|EDR39155.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165991494|gb|EDR43795.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166205660|gb|EDR50140.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166958233|gb|EDR55254.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048994|gb|EDR60402.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167055540|gb|EDR65333.1| ATP synthase F1, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752964|gb|ACA70482.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis YPIII] gi|186700494|gb|ACC91123.1| ATP synthase F1, beta subunit [Yersinia pseudotuberculosis PB1/+] gi|229678799|gb|EEO74904.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia pestis Nepal516] gi|229691254|gb|EEO83307.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229696196|gb|EEO86243.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229700230|gb|EEO88266.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia pestis Pestoides A] gi|270336895|gb|EFA47672.1| ATP synthase F1, beta subunit [Yersinia pestis KIM D27] gi|320017455|gb|ADW01027.1| F1 sector of membrane-bound ATP synthase, beta subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 460 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + I + P + +TGI+V+D+ P Sbjct: 83 ATLGRIMNVLGEPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|270158437|ref|ZP_06187094.1| ATP synthase F1 subunit beta [Legionella longbeachae D-4968] gi|289166724|ref|YP_003456862.1| H+-transporting ATP synthase beta chain [Legionella longbeachae NSW150] gi|269990462|gb|EEZ96716.1| ATP synthase F1 subunit beta [Legionella longbeachae D-4968] gi|288859897|emb|CBJ13883.1| putative H+-transporting ATP synthase beta chain [Legionella longbeachae NSW150] Length = 458 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+P+D +G + I K P ++ ++ +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPVDEAGPIG-AEEHWSIHRKPPTYEDQAGSQELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKESNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGVEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLAEEMGMLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR D E + + R++E +DI I G Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYDTARRVQQTLQRYKELKDIIAILG 377 >gi|220927730|ref|YP_002504639.1| F0F1 ATP synthase subunit beta [Clostridium cellulolyticum H10] gi|254808141|sp|B8I579|ATPB_CLOCE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|219998058|gb|ACL74659.1| ATP synthase F1, beta subunit [Clostridium cellulolyticum H10] Length = 465 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + + I + P ++ + +TGI+V+D+ P G Sbjct: 87 LGRIFNVLGEPVDKAGPV-EPTAYLPIHREAPSLEEQRPSTEILETGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216 +IG+F G+G+GK+ L+ R+ + I + VGER RE + D + D+ ++K Sbjct: 146 GKIGLFGGAGVGKTVLIMELIRNIATEHGGYSIFTGVGERTREGNDLWHD-MNDSGVIEK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ G Sbjct: 205 TAMVFGQMNEPPGARMRVGLTGLTMAEYFRDQMGQDVLLFIDNIFRFVQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +++ L ERI + KG+IT+V +V V D+ DP + + LD Sbjct: 265 IPSAVGYQPTLATDVGALQERI--ASTNKGSITSVQAVYVPADDLTDPAPATTFAHLDAT 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R + G YP VDPL S SR+ D +E ++ + ++ R +E +DI I G Sbjct: 323 TVLSRDIVAMGIYPAVDPLESTSRILDPKVVGEEHYTIARKVQEILQRNKELQDIIAILG 382 >gi|260886479|ref|ZP_05897742.1| ATP synthase F1, beta subunit [Selenomonas sputigena ATCC 35185] gi|330839673|ref|YP_004414253.1| ATP synthase subunit beta [Selenomonas sputigena ATCC 35185] gi|260863622|gb|EEX78122.1| ATP synthase F1, beta subunit [Selenomonas sputigena ATCC 35185] gi|329747437|gb|AEC00794.1| ATP synthase subunit beta [Selenomonas sputigena ATCC 35185] Length = 470 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/302 (32%), Positives = 159/302 (52%), Gaps = 9/302 (2%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 AC GRV N LG+ +D + + S I P ++ + +TGI+V+D+ P Sbjct: 87 AC-LGRVFNVLGRTVDHNPAPVGNKESWPIHRPAPKFDEQETSTQILETGIKVVDLIAPY 145 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + + + + VGER RE + + + Sbjct: 146 SRGGKIGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAGVGERTREGNDLWSEMTESGVI 205 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 DKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQGQDVLLFIDNIFRFIQAGSEVSALL 265 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +++ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 266 GRMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFTHLD 323 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 VL+R +AE G YP VDPL S SR+ D D ++ + ++ +++E +DI I Sbjct: 324 ATTVLSRQIAELGIYPAVDPLDSTSRILDPNVIGEDHYEVARGVQAVLQKYKELQDIIAI 383 Query: 393 GG 394 G Sbjct: 384 LG 385 >gi|149188271|ref|ZP_01866565.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1] gi|148837860|gb|EDL54803.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1] Length = 461 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G+ S EI P ++ + +TG++VID+ P G Sbjct: 87 GRIMNVLGQPIDECGPIGE-QASYEIHRPAPSYEDQSNSTELLETGVKVIDLICPFAKGG 145 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E ++ + R++E +DI I G Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPQIIGQEHYDTAQAVQKTLQRYKELKDIIAILG 380 >gi|150398119|ref|YP_001328586.1| F0F1 ATP synthase subunit beta [Sinorhizobium medicae WSM419] gi|190358705|sp|A6UDM1|ATPB_SINMW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|150029634|gb|ABR61751.1| ATP synthase F1, beta subunit [Sinorhizobium medicae WSM419] Length = 509 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D L K I P +++ + TGI+V+D+ P G Sbjct: 122 LGRIMNVIGEPVDEAGPL-KTSARRAIHQDAPAYVDQSTEAQILVTGIKVVDLLAPYAKG 180 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 181 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 239 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +T+AE F +G +VL +D+I RF + E+ Sbjct: 240 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEQFRDEGQDVLFFVDNIFRFTQAGSEV 299 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + KG+IT+V ++ V D+ DP + Sbjct: 300 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 357 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 358 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQGTLQRYKALQD 417 Query: 389 IRLIGG 394 I I G Sbjct: 418 IIAILG 423 >gi|112791344|gb|ABI21942.1| ATP synthase beta subunit [Shigella dysenteriae] Length = 421 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNYQELLETGIKVIDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354 >gi|221141622|ref|ZP_03566115.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus str. JKD6009] gi|302751984|gb|ADL66161.1| ATP synthase subunit beta, AtpB [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 470 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVACDVQSTLQKYRELQDIIAILG 385 >gi|270264094|ref|ZP_06192361.1| ATP synthase subunit beta [Serratia odorifera 4Rx13] gi|270041743|gb|EFA14840.1| ATP synthase subunit beta [Serratia odorifera 4Rx13] Length = 460 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 158/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P + + +TGI+V+D+ Sbjct: 83 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRPAPSYEDLANSQDLLETGIKVMDLI 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R++A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|170293999|gb|ACB13093.1| ATP synthase beta subunit [Prasinococcus capsulatus] Length = 367 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 162/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 AC GR+ N LG+P+D ++ S I + P + F+TGI+V+D+ P Sbjct: 18 ACTLGRIFNVLGEPVDEQGNVDSTTTS-PIHRRAPEFVELDTKLSIFETGIKVVDLLAPY 76 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI--------- 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 77 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYQEMKESKVI 136 Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 ED LGD+ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 137 DEDNLGDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFVDNIFRFVQ 194 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 195 AGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPA 252 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHR 382 + + LD VL+R+LA +G YP VDPL S S + + W E ++ + + R Sbjct: 253 PATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTML-QPWIVGEVHYAAAQGVKQTLQR 311 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 312 YKELQDIIAILG 323 >gi|290473116|ref|YP_003465977.1| membrane-bound ATP synthase, F1 sector subunit beta [Xenorhabdus bovienii SS-2004] gi|289172410|emb|CBJ79177.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Xenorhabdus bovienii SS-2004] Length = 460 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG PID +G+ + I P ++ +TGI+V+D+ P Sbjct: 83 ATLGRIMNVLGDPIDMKGEIGEEE-RWSIHRTAPSYEELSSSQELLETGIKVMDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|197286889|ref|YP_002152761.1| F0F1 ATP synthase subunit beta [Proteus mirabilis HI4320] gi|227354878|ref|ZP_03839293.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906] gi|226740661|sp|B4F0E7|ATPB_PROMH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|194684376|emb|CAR46024.1| ATP synthase beta chain [Proteus mirabilis HI4320] gi|227165031|gb|EEI49867.1| H(+)-transporting two-sector ATPase [Proteus mirabilis ATCC 29906] Length = 460 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 106/336 (31%), Positives = 168/336 (50%), Gaps = 17/336 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 IV +G + +S G V G + GR++N LG PID KG++ E Sbjct: 51 IVRCIAMGTSDGLSRGLKVEDLGHPIEVPVGKATLGRIMNVLGTPIDM-----KGEIETE 105 Query: 128 ----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 I + P ++ +TGI+V+D+ P G ++G+F G+G+GK+ + R Sbjct: 106 ERWSIHREAPTYEELSNSQELLETGIKVMDLICPFAKGGKVGLFGGAGVGKTVNMMELIR 165 Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239 + + + + VGER RE +F + N L K +V +E P R LT + Sbjct: 166 NIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKVSLVYGQMNEPPGNRLRVALTGL 225 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 T+AE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI Sbjct: 226 TMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 283 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + + G+IT+V +V V D+ DP + + LD +VL+R +A G YP VDPL S SR Sbjct: 284 TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSR 343 Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 D E V+ + ++ R++E +DI I G Sbjct: 344 QLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|15607015|ref|NP_214397.1| F0F1 ATP synthase subunit beta [Aquifex aeolicus VF5] gi|3913128|sp|O67828|ATPB_AQUAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|2984264|gb|AAC07790.1| ATP synthase F1 beta subunit [Aquifex aeolicus VF5] Length = 478 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 111/338 (32%), Positives = 179/338 (52%), Gaps = 16/338 (4%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGI 149 G +I GR+ N G+PID + + M + PP + Q + + +TGI Sbjct: 87 GPIKIPVGKEVLGRIFNVAGQPIDEQGPVEAKEYWP--MFRNPPELVEQSTKVEILETGI 144 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE- 204 +VID+ P+ G ++G+F G+G+GK+ L+ AR V++ VGER RE + Sbjct: 145 KVIDLLQPIIKGGKVGLFGGAGVGKTVLMQELIHNIARFHEGYSVVVG-VGERTREGNDL 203 Query: 205 FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 ++E L +V+V +E P +R T +T+AEYF +G +VL+ +D+I RF Sbjct: 204 WLEMKESGVLPYTVMVYGQMNEPPGVRFRVAHTGLTMAEYFRDVEGQDVLIFIDNIFRFV 263 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++T G LP A GY ++ +++ + ERI + +KG+ITA+ +V V D+ DP Sbjct: 264 QAGAEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TSTKKGSITAIQAVYVPADDITDP 321 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 S+ + LD VL R LAE G YP +DPL S S+ LA + + ++ + ++ R Sbjct: 322 APWSIFAHLDATTVLTRRLAELGIYPAIDPLESTSKYLAPEYVGEEHYEVAMEVKRILQR 381 Query: 383 FEETRDIRLIGGYRPGVDLILDKA-VHQVPIIYDFLKQ 419 ++E ++I I G D DKA V++ I FL Q Sbjct: 382 YKELQEIIAILGMEELSD--EDKAIVNRARRIQKFLSQ 417 >gi|148252986|ref|YP_001237571.1| F0F1 ATP synthase subunit beta [Bradyrhizobium sp. BTAi1] gi|190358216|sp|A5EBX1|ATPB2_BRASB RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|146405159|gb|ABQ33665.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Bradyrhizobium sp. BTAi1] Length = 476 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/267 (37%), Positives = 144/267 (53%), Gaps = 9/267 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++NA+GKP D L + I + PA+NR + F TGI+VID+ PL Sbjct: 94 LGRLLNAVGKPADRGPELPPSTVFRPIHASA-PALNRLGASQEIFHTGIKVIDLLAPLVK 152 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G + +F G+G+GK+ L+ R+ IS+ +GER RE E +E L + Sbjct: 153 GGKAAMFGGAGVGKTVLIMELIRTTVERYSGISVFAGIGERSREGHELLLELKQSGVLPR 212 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R A LTA+TIAE+F + +NVLL++D++ R + E++ G Sbjct: 213 TALVFGQMNEPPGARWRAGLTALTIAEHFRDVQHENVLLLIDNVYRLVQAGGEVSGLLGR 272 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 LP GY ++ SE+ L ERI + IT++ +V V D+ DP + S LD Sbjct: 273 LPSRVGYQPTLASEIAELQERI--ASVAGAAITSIQAVYVPADDFTDPAVAEIFSHLDSS 330 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLAD 362 IVL+R +A E YP VDPLAS S L D Sbjct: 331 IVLSRQMASEAMYPAVDPLASSSTLLD 357 >gi|170699474|ref|ZP_02890517.1| ATP synthase F1, beta subunit [Burkholderia ambifaria IOP40-10] gi|170135623|gb|EDT03908.1| ATP synthase F1, beta subunit [Burkholderia ambifaria IOP40-10] Length = 464 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESATTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382 >gi|82889062|gb|ABB92854.1| ATP synthase F1 beta subunit [Wolbachia pipientis] gi|82889066|gb|ABB92855.1| ATP synthase F1 beta subunit [Wolbachia pipientis] gi|82889068|gb|ABB92856.1| ATP synthase F1 beta subunit [Wolbachia pipientis] gi|82889075|gb|ABB92858.1| ATP synthase F1 beta subunit [Wolbachia pipientis] Length = 310 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 160/298 (53%), Gaps = 21/298 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG ++E + + PP+ QR+ E+ TGI+VID+ P G Sbjct: 18 GRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKG 76 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 77 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 134 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 194 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 195 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 252 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 S LD VL+R +AE G YP VDPL S S+ L+ + + K+ S + ++ ++ Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYKVASEVKRILQTYK 310 >gi|78486502|ref|YP_392427.1| F0F1 ATP synthase subunit beta [Thiomicrospira crunogena XCL-2] gi|118573773|sp|Q31DM0|ATPB_THICR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|78364788|gb|ABB42753.1| ATP synthase F1, beta subunit [Thiomicrospira crunogena XCL-2] Length = 459 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ + LG PID + + + M I P ++ +TG++VID+ P G Sbjct: 82 LGRIFDVLGNPIDNAGPV-ESEEKMTIHRPAPAFDELAASQELLETGVKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYYEMEESGVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF +G ++L +D+I R+ + E++ G +P Sbjct: 201 ALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ ++ ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLSQEMGQIQERI--TSTKTGSITSIQAVYVPADDLTDPAPATTFAHLDATVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 LNRS+AE G YP +DPL S SR D E + + R++E +DI I G Sbjct: 319 LNRSIAETGIYPAIDPLDSTSRQLDPLVVGSEHYDTARGVQETLQRYKELKDIIAILG 376 >gi|119355899|ref|YP_910543.1| F0F1 ATP synthase subunit beta [Chlorobium phaeobacteroides DSM 266] gi|166201696|sp|A1BCJ2|ATPB_CHLPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|119353248|gb|ABL64119.1| ATP synthase F1 subcomplex beta subunit [Chlorobium phaeobacteroides DSM 266] Length = 462 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G PIDG S+ + I P + F+TGI+VID+ P G Sbjct: 86 LGRMLNVVGDPIDGRGSVHTSK-TYSIHRSAPKFDELSTKTEMFETGIKVIDLLEPYSRG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ + + + + VGER RE + + + + K+ Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT ++IAEYF + + +VLL +D+I RF + E++ G + Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRM 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L +RI +KG++T+V ++ V D+ DP + + LD Sbjct: 265 PSAVGYQPTLATEMGELQDRI--VSTKKGSVTSVQAIYVPADDLTDPAPATAFAHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D D+ ++ ++ R+++ +DI I G Sbjct: 323 VLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQILQRYKDLQDIIAILG 381 >gi|283958883|ref|ZP_06376328.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|283789601|gb|EFC28424.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus A017934/97] Length = 470 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385 >gi|51244686|ref|YP_064570.1| F0F1 ATP synthase subunit beta [Desulfotalea psychrophila LSv54] gi|81826892|sp|Q6AQ10|ATPB_DESPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|50875723|emb|CAG35563.1| probable ATP synthase, beta chain (AtpB) [Desulfotalea psychrophila LSv54] Length = 471 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 155/298 (52%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+DG + SM I P + + +TGI+VID+ P G Sbjct: 94 GRIMNVVGRPVDGLGPI-PAKTSMSIHRDAPLFTEQDTEVRVLETGIKVIDLLVPFPLGG 152 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G GK+ ++ + IS+ VGER RE + + L K+ Sbjct: 153 KMGLFGGAGCGKTVIMMEMVNNIAMHHGGISVFCGVGERTREGNDLYNEMKESGVLPKAA 212 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V E P R LT +T AEYF +G +VL +D+I RF + E++ G +P Sbjct: 213 LVYGQMTEPPGARARVALTGLTAAEYFRDEEGQDVLFFVDNIFRFTQAGSEVSALLGRIP 272 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ ++L L ERI + KG+ITAV V V D+ DP + + LDG +V Sbjct: 273 SAVGYQPTLATDLGALQERI--TSTNKGSITAVQCVYVPADDLTDPAPATTFAHLDGTVV 330 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394 L+R ++E G YP VDPL S SR+ D +E V+ + + ++++ +DI I G Sbjct: 331 LSRQISELGIYPAVDPLDSTSRILDPNVIGEEHYDVARGVQVSLQKYKDLQDIIAILG 388 >gi|283471320|emb|CAQ50531.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus ST398] Length = 470 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385 >gi|254476168|ref|ZP_05089554.1| ATP synthase F1, beta subunit [Ruegeria sp. R11] gi|214030411|gb|EEB71246.1| ATP synthase F1, beta subunit [Ruegeria sp. R11] Length = 474 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 164/310 (52%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + + I P ++ + TGI+VID+ P Sbjct: 84 ATLGRILNVVGEPVDEQGPVVAAE-TRAIHQPAPEFSDQSTESEVLVTGIKVIDLLAPYA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESNV 200 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 201 IKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VLNR+++E G YP VDPL S SRL D + +E K+ S + ++ R++ Sbjct: 319 ATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDPSIVGEEHYKVASDVQQILQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|18033065|gb|AAL56974.1|AF326326_1 ATP synthase [Pasteurella multocida subsp. multocida] gi|18033067|gb|AAL56975.1|AF326327_1 ATP synthase [Pasteurella multocida subsp. gallicida] gi|18033069|gb|AAL56976.1|AF326328_1 ATP synthase [Pasteurella multocida subsp. gallicida] gi|18033071|gb|AAL56977.1|AF326329_1 ATP synthase [Pasteurella multocida subsp. septica] Length = 431 Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 157/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + + + PP+ Q + +TGI+VID+ P G Sbjct: 72 GRIMNVLGEPIDEQGEIGAEENWS--IHRAPPSYEEQSNSTELLETGIKVIDLVCPFAKG 129 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 130 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 189 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 190 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 249 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 250 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 307 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 308 LSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKDIIAILG 365 >gi|258407029|ref|ZP_05680179.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9763] gi|257841362|gb|EEV65806.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9763] Length = 470 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385 >gi|329729255|gb|EGG65663.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus 21193] Length = 470 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385 >gi|312437479|gb|ADQ76550.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp. aureus TCH60] Length = 470 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385 >gi|319650867|ref|ZP_08005004.1| F0F1 ATP synthase subunit beta [Bacillus sp. 2_A_57_CT2] gi|317397465|gb|EFV78166.1| F0F1 ATP synthase subunit beta [Bacillus sp. 2_A_57_CT2] Length = 473 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/302 (31%), Positives = 158/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+ ID D ++ D + + + P + E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGESIDLDPAI-PADARRDSIHREAPKFEQLSTEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ Sbjct: 209 KKTAMVFGQMNEPPGARMRVALTGLTMAEFFRDDQGQDVLFFMDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGKLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L+E G YP VDPLAS SR L+ + + + + + R+ E +DI I Sbjct: 327 ATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQQTLQRYRELQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|269203739|ref|YP_003283008.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus ED98] gi|262076029|gb|ACY12002.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus ED98] Length = 470 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385 >gi|145301172|ref|YP_001144013.1| F0F1 ATP synthase subunit beta [Aeromonas salmonicida subsp. salmonicida A449] gi|166201688|sp|A4STP3|ATPB_AERS4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|142853944|gb|ABO92265.1| F0F1 ATP synthase subunit beta [Aeromonas salmonicida subsp. salmonicida A449] Length = 462 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P ++ +TGI+VID+ P G Sbjct: 87 LGRIMNVLGEPIDEKGPIGEEE-RWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + + N L K Sbjct: 146 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 206 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 265 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + G+IT+V +V V D+ DP + + LD +V Sbjct: 266 SAVGYQPTLAEEMGVLQERI--TSTRTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 323 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E + + ++ R++E +DI I G Sbjct: 324 LSRQIAALGIYPAVDPLDSTSRQLDPLVVGKEHYETARGVQTVLQRYKELKDIIAILG 381 >gi|331004505|ref|ZP_08327975.1| ATP synthase subunit beta [Lachnospiraceae oral taxon 107 str. F0167] gi|330410683|gb|EGG90106.1| ATP synthase subunit beta [Lachnospiraceae oral taxon 107 str. F0167] Length = 463 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 156/294 (53%), Gaps = 9/294 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + K + + I K P + + +TGI+V+D+ P G Sbjct: 88 LGRIFNVLGEVIDKKEP-PKVEEYLPIHRKAPSFEEQSTQTEILETGIKVVDLLCPYQKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ R+ + + + VGER RE + + + K+ Sbjct: 147 GKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYHEMTDSGVINKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 207 TMVFGQMNEPPGARMRVGLTGLTMAEYFRDQGGKDVLLFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 267 PSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPANTFAHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 VL+RS+ E G YP VDPL S SR+ +E V+ + ++ +++E +DI Sbjct: 325 VLDRSIVEMGIYPAVDPLGSTSRILSPHIVGEEHYQVAQRVQEVLQKYKELQDI 378 >gi|307731459|ref|YP_003908683.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1003] gi|323527841|ref|YP_004229994.1| ATP synthase F1 subunit beta [Burkholderia sp. CCGE1001] gi|307585994|gb|ADN59392.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1003] gi|323384843|gb|ADX56934.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1001] Length = 464 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 167/330 (50%), Gaps = 12/330 (3%) Query: 72 ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 IC +G + + G +V + G+ + GR+++ LG+PID + ++ I Sbjct: 58 IC-LGASDGLRRGTVVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPIASDNMR-SIHQ 115 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDC 186 K P + +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 116 KAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHG 175 Query: 187 FDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 V VGER RE +F + N L K +V +E P R LT +T+AE+F Sbjct: 176 GYSVFAG-VGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHF 234 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ E+ +L ERI + + G Sbjct: 235 RDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTG 292 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + LD +VL+R +A G YP VDPL S SR D Sbjct: 293 SITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNV 352 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E + + + R++E RDI I G Sbjct: 353 IGEEHYSITRGVQQTLQRYKELRDIIAILG 382 >gi|291518502|emb|CBK73723.1| ATP synthase F1 subcomplex beta subunit [Butyrivibrio fibrisolvens 16/4] Length = 466 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG +DG ++L + + + PP Q V + +TGI+VID+ P G Sbjct: 88 GRLFNVLGDTLDGGENLDSAEHWS--IHREPPTFEEQSPVVEMLETGIKVIDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + + I + VGER RE + + L K+ Sbjct: 146 GKVGLFGGAGVGKTVLIQELIHNIATESGGYSIFTGVGERSREGNDLWTEMAESGVLDKT 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 206 ALVFGQMNEPPGARMRVAETGLTMAEYFRDVKNQDVLLFIDNIFRFVQAGSEVSALLGRM 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ ++L L ERI ++ G+IT+V +V V D+ DP + S LD Sbjct: 266 PSAVGYQPTLANDLGELQERIASTKN--GSITSVQAVYVPADDLTDPAPATTFSHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E + ++ +++E +DI I G Sbjct: 324 VLSRKIVEQGIYPAVDPLESTSRILEPDVVGEEHYNTARGVQEILQKYKELQDIIAILG 382 >gi|300910439|ref|ZP_07127891.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp. aureus TCH70] gi|300888281|gb|EFK83472.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp. aureus TCH70] Length = 470 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385 >gi|15925093|ref|NP_372627.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus Mu50] gi|15927677|ref|NP_375210.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus N315] gi|21283756|ref|NP_646844.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus MW2] gi|49484327|ref|YP_041551.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus MRSA252] gi|49486896|ref|YP_044117.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus MSSA476] gi|57652125|ref|YP_186910.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus COL] gi|82751704|ref|YP_417445.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus RF122] gi|87160880|ref|YP_494704.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196007|ref|YP_500820.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268554|ref|YP_001247497.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus JH9] gi|150394618|ref|YP_001317293.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus JH1] gi|151222219|ref|YP_001333041.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus str. Newman] gi|156980418|ref|YP_001442677.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus Mu3] gi|161510310|ref|YP_001575969.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253315771|ref|ZP_04838984.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253731059|ref|ZP_04865224.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733063|ref|ZP_04867228.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp. aureus TCH130] gi|255006891|ref|ZP_05145492.2| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257426242|ref|ZP_05602657.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus 55/2053] gi|257428900|ref|ZP_05605294.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus 65-1322] gi|257431509|ref|ZP_05607882.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus 68-397] gi|257434218|ref|ZP_05610568.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus E1410] gi|257437131|ref|ZP_05613171.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus M876] gi|257793861|ref|ZP_05642840.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9781] gi|258422051|ref|ZP_05684968.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9719] gi|258433580|ref|ZP_05688653.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9299] gi|258440475|ref|ZP_05690645.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A8115] gi|258445683|ref|ZP_05693861.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6300] gi|258450137|ref|ZP_05698232.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6224] gi|258453187|ref|ZP_05701178.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A5948] gi|258453408|ref|ZP_05701390.1| ATP synthase F1, beta subunit [Staphylococcus aureus A5937] gi|262049270|ref|ZP_06022145.1| ATP synthase subunit B [Staphylococcus aureus D30] gi|262052606|ref|ZP_06024800.1| ATP synthase subunit B [Staphylococcus aureus 930918-3] gi|282894747|ref|ZP_06302973.1| ATP synthase F1, beta subunit [Staphylococcus aureus A8117] gi|282904772|ref|ZP_06312646.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus C160] gi|282906447|ref|ZP_06314298.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus Btn1260] gi|282909416|ref|ZP_06317231.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911668|ref|ZP_06319467.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282914952|ref|ZP_06322732.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus M899] gi|282917452|ref|ZP_06325205.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus D139] gi|282920281|ref|ZP_06328005.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus C427] gi|282923091|ref|ZP_06330776.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9765] gi|282925492|ref|ZP_06333146.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus C101] gi|282929027|ref|ZP_06336612.1| ATP synthase F1, beta subunit [Staphylococcus aureus A10102] gi|283771271|ref|ZP_06344160.1| ATP synthase subunit beta [Staphylococcus aureus subsp. aureus H19] gi|293509020|ref|ZP_06667807.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus 58-424] gi|293510935|ref|ZP_06669634.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus M809] gi|293547537|ref|ZP_06672212.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus M1015] gi|294850073|ref|ZP_06790810.1| ATP synthase F1 [Staphylococcus aureus A9754] gi|295407033|ref|ZP_06816835.1| ATP synthase F1 [Staphylococcus aureus A8819] gi|295428690|ref|ZP_06821316.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296275418|ref|ZP_06857925.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus MR1] gi|297210076|ref|ZP_06926469.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297246032|ref|ZP_06929889.1| ATP synthase F1 [Staphylococcus aureus A8796] gi|297589830|ref|ZP_06948470.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp. aureus MN8] gi|304379284|ref|ZP_07362023.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54036785|sp|P63680|ATPB_STAAW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|54036794|sp|P99112|ATPB_STAAN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|54040855|sp|P63679|ATPB_STAAM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|60389598|sp|Q6G7K7|ATPB_STAAS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|60389623|sp|Q6GEX2|ATPB_STAAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81170378|sp|Q5HE97|ATPB_STAAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573754|sp|Q2FF24|ATPB_STAA3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573755|sp|Q2FWF0|ATPB_STAA8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573756|sp|Q2YUK1|ATPB_STAAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166222418|sp|A7X4U3|ATPB_STAA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|172048985|sp|A6QIU7|ATPB_STAAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081349|sp|A6U3I8|ATPB_STAA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081350|sp|A5IUP8|ATPB_STAA9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081351|sp|A8YY70|ATPB_STAAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|13701897|dbj|BAB43189.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus N315] gi|14247876|dbj|BAB58265.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus Mu50] gi|21205198|dbj|BAB95892.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus MW2] gi|49242456|emb|CAG41172.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus MRSA252] gi|49245339|emb|CAG43814.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus MSSA476] gi|57286311|gb|AAW38405.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus COL] gi|82657235|emb|CAI81676.1| ATP synthase beta chain [Staphylococcus aureus RF122] gi|87126854|gb|ABD21368.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203565|gb|ABD31375.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741623|gb|ABQ49921.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus JH9] gi|149947070|gb|ABR53006.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus JH1] gi|150375019|dbj|BAF68279.1| ATP synthase, beta subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|156722553|dbj|BAF78970.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus Mu3] gi|160369119|gb|ABX30090.1| F-ATPase superfamily proton( H+)- or sodium (Na+)-translocating F-type ATPase beta subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253725186|gb|EES93915.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728971|gb|EES97700.1| H(+)-transporting two-sector ATPase [Staphylococcus aureus subsp. aureus TCH130] gi|257270947|gb|EEV03120.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus 55/2053] gi|257274242|gb|EEV05759.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus 65-1322] gi|257277750|gb|EEV08420.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus 68-397] gi|257280857|gb|EEV11002.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus E1410] gi|257283524|gb|EEV13651.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus M876] gi|257787833|gb|EEV26173.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9781] gi|257841951|gb|EEV66383.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9719] gi|257849311|gb|EEV73290.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A9299] gi|257852544|gb|EEV76462.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A8115] gi|257855522|gb|EEV78459.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6300] gi|257856611|gb|EEV79517.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A6224] gi|257859133|gb|EEV81990.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus A5948] gi|257864389|gb|EEV87135.1| ATP synthase F1, beta subunit [Staphylococcus aureus A5937] gi|259159476|gb|EEW44526.1| ATP synthase subunit B [Staphylococcus aureus 930918-3] gi|259162635|gb|EEW47202.1| ATP synthase subunit B [Staphylococcus aureus D30] gi|269941702|emb|CBI50109.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus TW20] gi|282312893|gb|EFB43294.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus C101] gi|282316141|gb|EFB46522.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus C427] gi|282318654|gb|EFB49011.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus D139] gi|282321155|gb|EFB51486.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus M899] gi|282324433|gb|EFB54746.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282326686|gb|EFB56984.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330397|gb|EFB59915.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus Btn1260] gi|282589333|gb|EFB94425.1| ATP synthase F1, beta subunit [Staphylococcus aureus A10102] gi|282593282|gb|EFB98279.1| ATP synthase F1, beta subunit [Staphylococcus aureus A9765] gi|282594805|gb|EFB99782.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus C160] gi|282762835|gb|EFC02969.1| ATP synthase F1, beta subunit [Staphylococcus aureus A8117] gi|283459476|gb|EFC06569.1| ATP synthase subunit beta [Staphylococcus aureus subsp. aureus H19] gi|285817767|gb|ADC38254.1| ATP synthase beta chain [Staphylococcus aureus 04-02981] gi|290919657|gb|EFD96730.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus M1015] gi|291094724|gb|EFE24996.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus 58-424] gi|291466220|gb|EFF08747.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus M809] gi|294823021|gb|EFG39453.1| ATP synthase F1 [Staphylococcus aureus A9754] gi|294968058|gb|EFG44085.1| ATP synthase F1 [Staphylococcus aureus A8819] gi|295127360|gb|EFG57000.1| ATP synthase F1 [Staphylococcus aureus subsp. aureus EMRSA16] gi|296885276|gb|EFH24216.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177031|gb|EFH36286.1| ATP synthase F1 [Staphylococcus aureus A8796] gi|297576958|gb|EFH95672.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp. aureus MN8] gi|298695377|gb|ADI98599.1| ATP synthase beta chain [Staphylococcus aureus subsp. aureus ED133] gi|302333749|gb|ADL23942.1| ATP synthase subunit beta, AtpB [Staphylococcus aureus subsp. aureus JKD6159] gi|304342143|gb|EFM08043.1| ATP synthase F1 sector beta subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830455|emb|CBX35297.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128774|gb|EFT84774.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus CGS03] gi|315193268|gb|EFU23666.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus CGS00] gi|315196963|gb|EFU27305.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus CGS01] gi|320140725|gb|EFW32577.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus MRSA131] gi|320143701|gb|EFW35478.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus MRSA177] gi|323439348|gb|EGA97072.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus O11] gi|323442443|gb|EGB00072.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus O46] gi|329314788|gb|AEB89201.1| ATP synthase subunit beta [Staphylococcus aureus subsp. aureus T0131] gi|329723987|gb|EGG60511.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus 21189] gi|329726363|gb|EGG62831.1| ATP synthase F1, beta subunit [Staphylococcus aureus subsp. aureus 21172] Length = 470 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385 >gi|332163550|ref|YP_004300127.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318608057|emb|CBY29555.1| ATP synthase beta chain [Yersinia enterocolitica subsp. palearctica Y11] gi|325667780|gb|ADZ44424.1| F0F1 ATP synthase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 435 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I + P + + +TGI+V+D+ P G Sbjct: 60 LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEDLASSQDLLETGIKVMDLICPFAKG 118 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|170087348|ref|XP_001874897.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650097|gb|EDR14338.1| predicted protein [Laccaria bicolor S238N-H82] Length = 540 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 163/308 (52%), Gaps = 18/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + KG I + PP +++ + +TGI+V+D+ P Sbjct: 151 ATLGRIMNVIGEPIDERGPI-KGVKLCPIHADPPPFVDQSTTAEVLETGIKVVDLLAPYA 209 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE----D 208 G +IG+F G+G+GK+ L+ + S+ VGER RE E IE + Sbjct: 210 RGGKIGLFGGAGVGKTVLIQELINNVAKAHGGFSIFCGVGERTREGNDLYHEMIETGVIN 269 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 270 LEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGS 327 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 328 EVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPAT 385 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R +AE G YP VDPL S SR+ D E + +++ ++ ++ Sbjct: 386 TFAHLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPRIVGQEHYDVATAVQKILQDYKSL 445 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 446 QDIIAILG 453 >gi|325576871|ref|ZP_08147486.1| ATP synthase F1 sector beta subunit [Haemophilus parainfluenzae ATCC 33392] gi|325161077|gb|EGC73195.1| ATP synthase F1 sector beta subunit [Haemophilus parainfluenzae ATCC 33392] Length = 457 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEQGEIG-AEENWSIHRPAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|212640520|ref|YP_002317040.1| F0F1 ATP synthase subunit beta [Anoxybacillus flavithermus WK1] gi|226739973|sp|B7GMF3|ATPB_ANOFW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|212562000|gb|ACJ35055.1| F0F1-type ATP synthase, beta subunit [Anoxybacillus flavithermus WK1] Length = 473 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 101/331 (30%), Positives = 172/331 (51%), Gaps = 17/331 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+PID + + D + + + P + + + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGEPIDLGEEI-PADARRDAIHRPAPKFEQLSTQVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VL +D+I RF + E++ Sbjct: 209 NKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLFFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTAVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L+E G YP VDPLAS SR L+ + + ++ + + R++E +DI I Sbjct: 327 ATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYQVARKVQQTLQRYKELQDIIAI 386 Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ I FL Q+ Sbjct: 387 ----LGMDELSEEDKLVVHRARRIQFFLSQN 413 >gi|225851226|ref|YP_002731460.1| ATP synthase F1, beta subunit [Persephonella marina EX-H1] gi|225646035|gb|ACO04221.1| ATP synthase F1, beta subunit [Persephonella marina EX-H1] Length = 455 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 162/296 (54%), Gaps = 13/296 (4%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR ++ G PID LG K ++ + K P + + +TGI+++D+ P Sbjct: 83 LGRTLDIFGNPID---RLGEIKSNIEYPVYRKAPEITEGREEREILETGIKIVDLLVPFV 139 Query: 160 HGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLG-DNLK 215 G ++G+F G+G+GK+ LL+ +F + V I + VGER RE E + D LK Sbjct: 140 KGGKVGLFGGAGVGKTVLLTEFIFRMVKIHEGVSIFAGVGERIREAHELWHELKRLDVLK 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ +++ +E P +R A A++IAEYF K +VLL++D+I R+A + E++T G Sbjct: 200 RTTLILGQMNEPPGIRAKAIFPALSIAEYFRDEKNTDVLLLIDNIFRYAQAGMEVSTLLG 259 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +LP GY ++ E+ + ERI + + G+IT+V ++ V D+ DP S + LD Sbjct: 260 KLPARAGYQPTLKEEIAVVEERI--TSTKSGSITSVQAIYVPADDITDPAPSSTFAHLDS 317 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDI 389 ++L+R A +G YP +DPL S +++ D E V++L + + R+ + DI Sbjct: 318 TVILSRERAAKGFYPAIDPLESRTKVLDPDIVGHEHYEVANLVRYHLQRYRDLEDI 373 >gi|157368257|ref|YP_001476246.1| F0F1 ATP synthase subunit beta [Serratia proteamaculans 568] gi|166990375|sp|A8G7M8|ATPB_SERP5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157320021|gb|ABV39118.1| ATP synthase F1, beta subunit [Serratia proteamaculans 568] Length = 460 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 158/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+PID KGD+ E I P + + +TGI+V+D+ Sbjct: 83 ATLGRIMNVLGEPIDM-----KGDIGEEERWAIHRPAPSYEDLANSQDLLETGIKVMDLI 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R++A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|307299330|ref|ZP_07579131.1| ATP synthase F1, beta subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306915126|gb|EFN45512.1| ATP synthase F1, beta subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 473 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 159/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PID + D EI P ++Q + +TGI+VID+ P G Sbjct: 93 LGRMFNLLGEPIDEKGEVKFSD-HWEIHRAAPSVTDQQTEVEILETGIKVIDLLAPFSKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG G+G+GK+ L+ R+ ++ +S+ VGER RE + D ++ + Sbjct: 152 GKIGFSGGAGVGKTVLVMELIRNFAIEQKGLSVFAGVGERTREGNDLWLDMQEAGVIENT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L+A+T+AEYF + +VL+ +D+I RF + E++ G + Sbjct: 212 ALVFGQMNEPPGARFRVGLSAITMAEYFRDVQKKDVLVFIDNIFRFVQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + G+IT+V ++ V D+ DP + S LD + Sbjct: 272 PSAVGYQPTLATEMGNLQERI--TSTRSGSITSVQAIYVPADDFTDPAPATTFSHLDATV 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+AE+G YP VDPL S S+ D E ++ + ++ R+++ +DI I G Sbjct: 330 NLSRSIAEQGLYPAVDPLDSTSKNLDPVVVGQEHYQVARRVQEVLQRYKDLQDIIAILG 388 >gi|256387197|gb|ACU80599.1| ATP synthase beta subunit [Xenoturbella bocki] Length = 335 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 106/314 (33%), Positives = 163/314 (51%), Gaps = 19/314 (6%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 I A GR++N +G+PID + I P ++ TGI+V+D+ Sbjct: 13 IPVGAETLGRIMNVIGEPIDERGPFAA-TTKLGIHQDAPEFTEMSVEQEILVTGIKVVDL 71 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFI 206 P G +IG+F G+G+GK+ L+ + A++ V VGER RE E I Sbjct: 72 LAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMI 130 Query: 207 E----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 E D GDN K S+V +E P R LT +T+AEYF ++G +VLL +D+I R Sbjct: 131 EGGVIDLKGDNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDAEGQDVLLFIDNIFR 189 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ Sbjct: 190 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAVYVPADDLT 247 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP + + LD VL+R +AE G YP VDPL S SR+ D+ DE V+ + ++ Sbjct: 248 DPAPATTFAHLDATTVLSRGIAELGFYPAVDPLDSSSRILDRNIVGDEHYNVTRGVQKIL 307 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 308 QDYKSLQDIIAILG 321 >gi|15603359|ref|NP_246433.1| F0F1 ATP synthase subunit beta [Pasteurella multocida subsp. multocida str. Pm70] gi|17372630|sp|Q9CKW1|ATPB_PASMU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|12721878|gb|AAK03578.1| AtpD [Pasteurella multocida subsp. multocida str. Pm70] Length = 457 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCH 160 GR++N LG+PID +G + + + PP+ Q + +TGI+VID+ P Sbjct: 82 LGRIMNVLGEPIDEQGEIGAEENWS--IHRAPPSYEEQSNSTELLETGIKVIDLVCPFAK 139 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 140 GGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDK 199 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G + Sbjct: 200 VSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRM 259 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD + Sbjct: 260 PSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTV 317 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 318 VLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKDIIAILG 376 >gi|301155216|emb|CBW14681.1| F1 sector of membrane-bound ATP synthase, beta subunit [Haemophilus parainfluenzae T3T1] Length = 457 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/302 (33%), Positives = 156/302 (51%), Gaps = 16/302 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR++N LG+PID KGD+ E I P + + +TGI+VID+ P Sbjct: 82 LGRIMNVLGEPIDE-----KGDIGAEENWAIHRPAPSYEEQSNSTELLETGIKVIDLICP 136 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N Sbjct: 137 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNV 196 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ Sbjct: 197 LDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALL 256 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 257 GRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLD 314 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I Sbjct: 315 STVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAI 374 Query: 393 GG 394 G Sbjct: 375 LG 376 >gi|289706358|ref|ZP_06502716.1| ATP synthase F1, beta subunit [Micrococcus luteus SK58] gi|289556853|gb|EFD50186.1| ATP synthase F1, beta subunit [Micrococcus luteus SK58] Length = 485 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 158/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG+ +D S + + I P + + + +TGI+VID+ TP G Sbjct: 105 GHIFNVLGETLDMPSSQLQAEDRWPIHRPAPNFASLEGSTEMLETGIKVIDLLTPYIKGG 164 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E D LK + Sbjct: 165 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMDEADVLKDTA 224 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF+ + E++T G +P Sbjct: 225 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRMP 284 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ +V V D++ DP +V + LD Sbjct: 285 SAVGYQPNLADEMGVLQERI--TSTRGHSITSMQAVYVPADDYTDPAPANVFAHLDATTN 342 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R LA G YP VDPLAS SR+ D + D + + ++ + +E +DI I G Sbjct: 343 LTRDLASRGLYPAVDPLASTSRILDPQYVGQDHYDVAIRVKQILQKNKELQDIIAILG 400 >gi|34500018|gb|AAQ73591.1| ATP synthase beta subunit [Bisgaard Taxon 7] Length = 444 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 159/301 (52%), Gaps = 16/301 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPL 158 GR++N LG+PID KG + E + + PP+ Q + +TGI+VID+ P Sbjct: 83 GRIMNVLGEPIDE-----KGPIGAEENWSIHRAPPSYEEQSNSTELLETGIKVIDLVCPF 137 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 138 AKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMSDSNVL 197 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 198 DKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLG 257 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 258 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDS 315 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D +E V+ + ++ R++E +DI I Sbjct: 316 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGILQRYKELKDIIAIL 375 Query: 394 G 394 G Sbjct: 376 G 376 >gi|238797873|ref|ZP_04641365.1| ATP synthase subunit beta [Yersinia mollaretii ATCC 43969] gi|238718289|gb|EEQ10113.1| ATP synthase subunit beta [Yersinia mollaretii ATCC 43969] Length = 447 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I + P + +TGI+V+D+ P G Sbjct: 72 LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 130 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 131 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 190 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 191 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 250 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 251 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 308 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 309 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 366 >gi|71370818|gb|AAZ30638.1| ATP synthase beta subunit [Amphiporus angulatus] Length = 427 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/319 (32%), Positives = 163/319 (51%), Gaps = 19/319 (5%) Query: 89 HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148 H R + P GR+IN +G+PID + D I ++ P + ++ TG Sbjct: 53 HPIRIPVGPETL--GRIINVIGEPIDERGPV-PTDKRASIPAEAPEFVEMSVQQEILATG 109 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 110 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGND 168 Query: 202 -VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 E IE L D+ K +V +E P R LT +T+AEYF KG +VLL + Sbjct: 169 LYHEMIESGVINLKDSSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQKGQDVLLFI 228 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V Sbjct: 229 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVP 286 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375 D+ DP + + LD VL+R +AE G YP VDPL S SR+ D DE + Sbjct: 287 ADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPHIVGDEHYGIARG 346 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ + +DI I G Sbjct: 347 VQKILQDYRSLQDIIAILG 365 >gi|67924174|ref|ZP_00517617.1| ATP synthase F1, beta subunit [Crocosphaera watsonii WH 8501] gi|67853990|gb|EAM49306.1| ATP synthase F1, beta subunit [Crocosphaera watsonii WH 8501] Length = 483 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 166/323 (51%), Gaps = 16/323 (4%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D+V + GR+ N LG+P+D +G + S I P + + K Sbjct: 80 DIVDSGSPISVPVGKATLGRIFNVLGEPVDEMGDVGNEETS-PIHRPAPKLTDLETKPKV 138 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 F+TGI+VID+ TP G +IG+F G+G+GK+ ++ + +S+ VGER RE Sbjct: 139 FETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFAGVGERTRE 198 Query: 202 ----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252 E IE + +NL +S +V +E P R L+ +T+AEYF +V Sbjct: 199 GNDLYNEMIESKVINPENLSESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDV 258 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LL +D+I RF + E++ G +P A GY ++ +++ L ERI + ++G+IT++ + Sbjct: 259 LLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQA 316 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371 V V D+ DP + + LDG VL+R LA +G YP VDPL S S + + DE Sbjct: 317 VYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQPSVVGDEHYD 376 Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394 ++ + R++E +DI I G Sbjct: 377 TARAVQSTLQRYKELQDIIAILG 399 >gi|320407247|gb|ADW27399.1| ATP synthase beta subunit [Spiochaetopterus sp. THS-2011] Length = 369 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/316 (33%), Positives = 164/316 (51%), Gaps = 19/316 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID + M I + P ++ ++ +TGI+V+ Sbjct: 54 IRIPVGRETLGRIINVIGEPIDERGPV-NAKAQMAIHQEAPDFVDMSVEQEILETGIKVV 112 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 113 DLLAPYSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLXHE 171 Query: 205 FIE----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 I+ D GDN K S V +E P R LT +TIAEYF ++G +VLL +D+I Sbjct: 172 MIQTGVIDLKGDNSKVSXVY-GQMNEPPGARARVCLTGLTIAEYFRDAEGQDVLLFIDNI 230 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 231 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 288 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTH 378 DP + + LD VL+R +AE G YP VDPL S SR+ D A+ + + Sbjct: 289 LTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGAEHYNIARGVQK 348 Query: 379 LIHRFEETRDIRLIGG 394 ++ + +DI I G Sbjct: 349 ILQDHKSLQDIIAILG 364 >gi|284025137|ref|ZP_06379535.1| F0F1 ATP synthase subunit beta [Staphylococcus aureus subsp. aureus 132] Length = 470 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID + + + + + + PA + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLKEEISDS-VRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E +KK Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMSDSGVIKK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 268 MPSAVGYQPTLATEMGQLQERI--TSTTKGSVTSIQAVFVPADDYTDPAPATAFAHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I G Sbjct: 326 TNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARDVQSTLQKYRELQDIIAILG 385 >gi|291165819|gb|EFE27867.1| ATP synthase F1, beta subunit [Filifactor alocis ATCC 35896] Length = 465 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/317 (32%), Positives = 165/317 (52%), Gaps = 11/317 (3%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D + G + GR+ N LG+PID L +G+ + + PPA Q+ Sbjct: 71 DAIDTGGAISVPVGKNTLGRIFNLLGQPIDEAGDLEEGE--KWPIHRDPPAYEEQQTNAE 128 Query: 145 -FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGR 200 +TGI+VID+ P G +IG+F G+G+GK+ ++ + +S+ VGER R Sbjct: 129 ILETGIKVIDLICPYQKGGKIGLFGGAGVGKTVIIMELINNIAKQHGGLSVFTGVGERTR 188 Query: 201 EVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258 E + + E L K+ +V +E P R LT +T+AEYF + G +VLL +D+ Sbjct: 189 EGNDLYYEMKESGVLDKTALVFGQMNEPPGARMRVGLTGLTMAEYFRDRAGQDVLLFIDN 248 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +E+ L ERI + +KG+IT+V +V V D Sbjct: 249 IFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTQKGSITSVQAVYVPAD 306 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLT 377 + DP + + LD VL+R +A G YP VDPL S SR L+ + + ++ + Sbjct: 307 DLTDPAPATTFAHLDATTVLSRQIASLGIYPAVDPLDSTSRILSPEVVGEEHYEVARGVQ 366 Query: 378 HLIHRFEETRDIRLIGG 394 ++ + ++ +DI I G Sbjct: 367 SILQKMKDLQDIIAILG 383 >gi|237814345|ref|YP_002898796.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346] gi|254184023|ref|ZP_04890614.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655] gi|184214555|gb|EDU11598.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1655] gi|237504492|gb|ACQ96810.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei MSHR346] Length = 463 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382 >gi|163737805|ref|ZP_02145222.1| F0F1 ATP synthase subunit beta [Phaeobacter gallaeciensis BS107] gi|163742889|ref|ZP_02150273.1| F0F1 ATP synthase subunit beta [Phaeobacter gallaeciensis 2.10] gi|161383853|gb|EDQ08238.1| F0F1 ATP synthase subunit beta [Phaeobacter gallaeciensis 2.10] gi|161389331|gb|EDQ13683.1| ATP synthase subunit beta [Phaeobacter gallaeciensis BS107] Length = 474 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 164/310 (52%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + + I P ++ + TGI+VID+ P Sbjct: 84 ATLGRILNVVGEPVDEQGPVVAAE-TRAIHQPAPEFSDQSTESEVLVTGIKVIDLLAPYA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESNV 200 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 201 IKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384 + + LD VLNRS++E G YP VDPL S SRL D + +E V+S + ++ R++ Sbjct: 319 ATTFAHLDATTVLNRSISELGIYPAVDPLDSTSRLMDPSIVGEEHYAVASDVQQILQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|52843175|ref|YP_096974.1| F0F1 ATP synthase subunit beta [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|54295820|ref|YP_128235.1| F0F1 ATP synthase subunit beta [Legionella pneumophila str. Lens] gi|54298986|ref|YP_125355.1| F0F1 ATP synthase subunit beta [Legionella pneumophila str. Paris] gi|148361322|ref|YP_001252529.1| ATP synthase F1 subunit beta [Legionella pneumophila str. Corby] gi|296108663|ref|YP_003620364.1| F-type H -transporting ATPase beta chain [Legionella pneumophila 2300/99 Alcoy] gi|81822284|sp|Q5WSG8|ATPB_LEGPL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81822477|sp|Q5X0P3|ATPB_LEGPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81823315|sp|Q5ZRA1|ATPB_LEGPH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166201715|sp|A5III3|ATPB_LEGPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|52630286|gb|AAU29027.1| H+-transporting two-sector ATPase, ATP synthase F1 subunit beta [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|53752771|emb|CAH14206.1| hypothetical protein lpp3053 [Legionella pneumophila str. Paris] gi|53755652|emb|CAH17154.1| hypothetical protein lpl2910 [Legionella pneumophila str. Lens] gi|148283095|gb|ABQ57183.1| H+-transporting two-sector ATPase, ATP synthase F1 subunit beta [Legionella pneumophila str. Corby] gi|295650565|gb|ADG26412.1| F-type H -transporting ATPase beta chain [Legionella pneumophila 2300/99 Alcoy] gi|307611866|emb|CBX01582.1| hypothetical protein LPW_32691 [Legionella pneumophila 130b] Length = 458 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+P+D D + + I K P + ++ +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPVD-DAGPIDAEETWAIHRKAPSYEEQAGSQELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGVEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLAEEMGMLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR D E + + R++E +DI I G Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYDTARRVQQTLQRYKELKDIIAILG 377 >gi|152972641|ref|YP_001337787.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238897239|ref|YP_002921987.1| F0F1 ATP synthase subunit beta [Klebsiella pneumoniae NTUH-K2044] gi|262040363|ref|ZP_06013609.1| ATP synthase F1 sector subunit beta [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|330005181|ref|ZP_08305143.1| ATP synthase F1, beta subunit [Klebsiella sp. MS 92-3] gi|166201714|sp|A6TG36|ATPB_KLEP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|150957490|gb|ABR79520.1| ATP synthase subunit B [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|238549569|dbj|BAH65920.1| ATP synthase subunit B [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|259042304|gb|EEW43329.1| ATP synthase F1 sector subunit beta [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|328536387|gb|EGF62746.1| ATP synthase F1, beta subunit [Klebsiella sp. MS 92-3] Length = 460 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+P+D KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGQPVDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|110835587|ref|YP_694446.1| F0F1 ATP synthase subunit beta [Alcanivorax borkumensis SK2] gi|118573503|sp|Q0VKX4|ATPB_ALCBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|110648698|emb|CAL18174.1| ATP synthase, beta subunit [Alcanivorax borkumensis SK2] Length = 460 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID +G+ + M I P ++ + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPIDEAGPIGEEE-RMPIHRAAPTYADQAATNELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD + Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVS 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP +DPL S SR D E + + ++ RF+E +DI I G Sbjct: 320 LSRDIASKGIYPAIDPLDSTSRQLDPLVIGQEHYDIARGVQTVLQRFKELKDIIAILG 377 >gi|53721003|ref|YP_109989.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei K96243] gi|53724016|ref|YP_104462.1| F0F1 ATP synthase subunit beta [Burkholderia mallei ATCC 23344] gi|76809634|ref|YP_331595.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1710b] gi|83718763|ref|YP_443800.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis E264] gi|121599585|ref|YP_994634.1| F0F1 ATP synthase subunit beta [Burkholderia mallei SAVP1] gi|126439925|ref|YP_001060961.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 668] gi|126448967|ref|YP_001082535.1| F0F1 ATP synthase subunit beta [Burkholderia mallei NCTC 10247] gi|126455115|ref|YP_001068261.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 1106a] gi|134281409|ref|ZP_01768117.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305] gi|217424098|ref|ZP_03455598.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576] gi|226193310|ref|ZP_03788920.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|238561567|ref|ZP_00441840.2| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4] gi|242317222|ref|ZP_04816238.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b] gi|251767098|ref|ZP_04819956.1| ATP synthase F1, beta subunit [Burkholderia mallei PRL-20] gi|254174689|ref|ZP_04881350.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399] gi|254186488|ref|ZP_04893005.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|254194697|ref|ZP_04901128.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13] gi|254261967|ref|ZP_04953021.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a] gi|254298703|ref|ZP_04966154.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e] gi|81823891|sp|Q62FR5|ATPB1_BURMA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|81824616|sp|Q63PI0|ATPB1_BURPS RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|118573514|sp|Q3JXV8|ATPB1_BURP1 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|118573516|sp|Q2STE9|ATPB1_BURTA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|190358205|sp|A3MQJ9|ATPB1_BURM7 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|190358206|sp|A1V8T1|ATPB1_BURMS RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|190358207|sp|A3P0Z0|ATPB1_BURP0 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|190358208|sp|A3NF40|ATPB1_BURP6 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|52211417|emb|CAH37408.1| ATP synthase beta chain [Burkholderia pseudomallei K96243] gi|52427439|gb|AAU48032.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 23344] gi|76579087|gb|ABA48562.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710b] gi|83652588|gb|ABC36651.1| ATP synthase F1, beta subunit [Burkholderia thailandensis E264] gi|121228395|gb|ABM50913.1| ATP synthase F1, beta subunit [Burkholderia mallei SAVP1] gi|126219418|gb|ABN82924.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 668] gi|126228757|gb|ABN92297.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106a] gi|126241837|gb|ABO04930.1| ATP synthase F1, beta subunit [Burkholderia mallei NCTC 10247] gi|134247076|gb|EBA47162.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 305] gi|157808477|gb|EDO85647.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 406e] gi|157934173|gb|EDO89843.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|160695734|gb|EDP85704.1| ATP synthase F1, beta subunit [Burkholderia mallei ATCC 10399] gi|169651447|gb|EDS84140.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei S13] gi|217393161|gb|EEC33183.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 576] gi|225934910|gb|EEH30887.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|238524340|gb|EEP87773.1| ATP synthase F1, beta subunit [Burkholderia mallei GB8 horse 4] gi|242140461|gb|EES26863.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1106b] gi|243063944|gb|EES46130.1| ATP synthase F1, beta subunit [Burkholderia mallei PRL-20] gi|254220656|gb|EET10040.1| ATP synthase F1, beta subunit [Burkholderia pseudomallei 1710a] Length = 464 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 382 >gi|126002169|ref|XP_001352282.1| ATPsyn-beta [Drosophila pseudoobscura pseudoobscura] gi|195173595|ref|XP_002027573.1| GL18400 [Drosophila persimilis] gi|54640128|gb|EAL29273.1| ATPsyn-beta [Drosophila pseudoobscura pseudoobscura] gi|194114485|gb|EDW36528.1| GL18400 [Drosophila persimilis] Length = 506 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR++N +G+PID + D + I ++ P + ++ TGI+V+ Sbjct: 110 IRIPVGAETLGRIMNVIGEPIDERGPI-PTDKTAPIHAEAPEFIEMSVEQEILVTGIKVV 168 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 169 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 227 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 228 MIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 287 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 288 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 345 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 346 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVARGVQKI 405 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 406 LQDYKSLQDIIAILG 420 >gi|266624715|ref|ZP_06117650.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479] gi|288863414|gb|EFC95712.1| ATP synthase F1, beta subunit [Clostridium hathewayi DSM 13479] Length = 463 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 21/300 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVEKG-FKTGIRVIDIF 155 GR+ N LG PID E+ +P P Q E +TGI+V+D+ Sbjct: 89 LGRIFNVLGDPIDNKPK-------PEVKEYLPIHRPAPTFEEQSTETEILETGIKVVDLL 141 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLG 211 P G +IG+F G+G+GK+ L+ R+ + + + VGER RE + + E Sbjct: 142 CPYQKGGKIGLFGGAGVGKTVLIQELIRNIATEHGGYSVFTGVGERTREGNDLYYEMQES 201 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270 + K+ +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ Sbjct: 202 GVINKTTMVFGQMNEPPGARMRVGLTGLTMAEYFRDQAGKDVLLFIDNIFRFTQAGSEVS 261 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 262 ALLGRMPSAVGYQPTLQTEMGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPANTFA 319 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VL+R++ E G YP VDPL S SR+ D +E V+ + ++ +++E +DI Sbjct: 320 HLDATTVLSRAIVELGIYPAVDPLESTSRILDPRIVGEEHYNVARGVQEVLQKYKELQDI 379 >gi|167576938|ref|ZP_02369812.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis TXDOH] Length = 395 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 12/270 (4%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFA 182 I PP ++ F TGI+VID+ PL G + +F G+G+GK+ L+ +M Sbjct: 17 IHRGAPPLAEQKSATALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVE 76 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241 R + + +GER RE E + D G L ++V+V +E P R PLTA+ I Sbjct: 77 RYRGIS--VFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAI 134 Query: 242 AEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 AEYF + NVLL++D++ RF + E++ G LP GY ++ SE+ L ERI + Sbjct: 135 AEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--A 192 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 E +TA+ +V V D+ DP ++ + +D +VL+R++A EG YP +DP+AS S L Sbjct: 193 SVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSIL 252 Query: 361 ADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 D + V+ + +I + E +D+ Sbjct: 253 LDPLVVGEAHVEVAIEVRRVIEHYRELQDV 282 >gi|112791350|gb|ABI21945.1| ATP synthase beta subunit [Klebsiella pneumoniae] Length = 421 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+P+D KGD+ E I P ++ +TGI+VID+ Sbjct: 58 ATLGRIMNVLGQPVDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 112 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 113 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 172 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 173 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 232 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 233 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 290 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + ++ R++E +DI Sbjct: 291 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 350 Query: 391 LIGG 394 I G Sbjct: 351 AILG 354 >gi|1073879|pir||D64071 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain - Haemophilus influenzae (strain Rd KW20) Length = 468 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID ++G+ + I P + + +TGI+VID+ P G Sbjct: 93 LGRIMNVLGEPIDEQGAIGEEE-RWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 152 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 212 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 271 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 272 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 329 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 330 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 387 >gi|261867032|ref|YP_003254954.1| F0F1 ATP synthase subunit beta [Aggregatibacter actinomycetemcomitans D11S-1] gi|261412364|gb|ACX81735.1| F0F1 ATP synthase subunit beta [Aggregatibacter actinomycetemcomitans D11S-1] Length = 457 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEQGPIGEEE-RWSIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKDIIAILG 376 >gi|170694320|ref|ZP_02885474.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M] gi|170140743|gb|EDT08917.1| ATP synthase F1, beta subunit [Burkholderia graminis C4D1M] Length = 464 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D+ I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-NSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382 >gi|167036417|ref|YP_001671648.1| F0F1 ATP synthase subunit beta [Pseudomonas putida GB-1] gi|189081339|sp|B0KRA8|ATPB_PSEPG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166862905|gb|ABZ01313.1| ATP synthase F1, beta subunit [Pseudomonas putida GB-1] Length = 458 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/332 (30%), Positives = 168/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G E + G D+V + GR+++ LG PID +G+ + Sbjct: 49 VVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDEAGPIGE-EERRG 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I P ++ +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 108 IHQPAPSFADQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAM 167 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + N L K +V +E P R LT +T+AE Sbjct: 168 EHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAE 227 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F +G++VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 228 KFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTK 285 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 +G+IT+V +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 286 EGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDP 345 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E + +++ R++E +DI I G Sbjct: 346 NVIGNEHYDTARGVQYVLQRYKELKDIIAILG 377 >gi|91783932|ref|YP_559138.1| F0F1 ATP synthase subunit beta [Burkholderia xenovorans LB400] gi|123062814|sp|Q13XV3|ATPB1_BURXL RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|91687886|gb|ABE31086.1| ATP synthase F1, beta subunit [Burkholderia xenovorans LB400] Length = 496 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 156/293 (53%), Gaps = 8/293 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ G D +L I PP + + F TGI+VID+ PL G Sbjct: 102 GRLLDVTGATRDDGPALPAQIERRPIHRAAPPLASLKGTSTLFSTGIKVIDLLAPLAQGG 161 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 + +F G+G+GK+ L+ + A + ++ + + + VGER RE E + D L ++V Sbjct: 162 KAAMFGGAGVGKTVLVMELIHAVVERYEGISVFAGVGERSREGHEMLLDMRTSGVLPRTV 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R P TA+TIAEYF + NVLL++D++ RF + E++ G +P Sbjct: 222 LVYGQMNEPPGARWRVPFTALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +E+ L ERI ++TA+ +V V D+ DP ++ + LD +V Sbjct: 282 SRVGYQPTLATEVASLQERI--VSVGGVSVTAIEAVYVPADDFTDPAVTAIAAHLDSMVV 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 L+RS+A EG YP VDP+AS S L D +E V++ + +I + E +D+ Sbjct: 340 LSRSMAAEGMYPAVDPIASSSILLDPLVVGEEHAAVATEVRRIIEHYRELQDV 392 >gi|71370914|gb|AAZ30686.1| ATP synthase beta subunit [Haliotis rufenscens] Length = 427 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/315 (31%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID + + + I ++ P ++ ++ +TGI+V+ Sbjct: 55 IRIPVGPKTLGRIINVIGEPIDERGPVETENFAA-IHAEAPEFVDMNVQQEILETGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE + + Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172 Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 173 MITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDMEGQDVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR+ D DE + + + Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGDEHYGIARGVQKI 350 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 351 LQDYKSLQDIIAILG 365 >gi|27375551|ref|NP_767080.1| F0F1 ATP synthase subunit beta [Bradyrhizobium japonicum USDA 110] gi|81842025|sp|Q89X74|ATPB_BRAJA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|27348688|dbj|BAC45705.1| ATP synthase beta chain [Bradyrhizobium japonicum USDA 110] Length = 477 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/317 (31%), Positives = 160/317 (50%), Gaps = 19/317 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ GR+IN +G+PID + K + I + P ++ + TGI+V+D Sbjct: 78 RVPVGEGTLGRIINVIGEPIDEAGPV-KSEGLRAIHQEAPTYTDQSTEAEILVTGIKVVD 136 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206 + P G +IG+F G+G+GK+ L+ + + + VGER RE EFI Sbjct: 137 LLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFI 196 Query: 207 EDYLGDN--------LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDS 258 E + + K +V +E P R LT +TIAE F KG +VL +D+ Sbjct: 197 ESKVNADPHNPDPSVKSKCALVFGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDN 256 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D Sbjct: 257 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPAD 314 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377 + DP + + LD L+RS+AE+G YP VDPL S SR+ +E V+ + Sbjct: 315 DLTDPAPATSFAHLDATTTLSRSIAEKGIYPAVDPLDSTSRMLSPLVVGEEHYAVARQVQ 374 Query: 378 HLIHRFEETRDIRLIGG 394 ++ R++ +DI I G Sbjct: 375 QVLQRYKALQDIIAILG 391 >gi|112791348|gb|ABI21944.1| ATP synthase beta subunit [Salmonella sp. ICMP 15669] Length = 421 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354 >gi|15616638|ref|NP_239850.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219681397|ref|YP_002467782.1| ATP synthase subunit B [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|219681953|ref|YP_002468337.1| ATP synthase subunit B [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|257471070|ref|ZP_05635069.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|11131216|sp|P57124|ATPB_BUCAI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808135|sp|B8D8H3|ATPB_BUCA5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808136|sp|B8D6S7|ATPB_BUCAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|25290462|pir||H84930 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain [imported] - Buchnera sp. (strain APS) gi|10038701|dbj|BAB12736.1| ATP synthase beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|219621686|gb|ACL29842.1| ATP synthase subunit B [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219624240|gb|ACL30395.1| ATP synthase subunit B [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|311085758|gb|ADP65840.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311086335|gb|ADP66416.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)] gi|311086910|gb|ADP66990.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087501|gb|ADP67580.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 465 Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/338 (31%), Positives = 173/338 (51%), Gaps = 16/338 (4%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + G +V G + ++ GR+IN LG+ ID +L K + S + Sbjct: 51 VVRTIAMGSSNGLKRGLIVTDLGHYIKVPVGEATLGRIINVLGETIDNKGAL-KNNQSDK 109 Query: 128 I----MSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 I + + PP+ Q + +TGI+VID+ P G ++G+F G+G+GK+ + Sbjct: 110 IEYWEIHRSPPSYRDQASCREILETGIKVIDLICPFSKGGKVGLFGGAGVGKTVNMMELI 169 Query: 183 RSDCFDKV---IISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLT 237 R+ + + + VGER RE +F + + D+ L K +V +E P R T Sbjct: 170 RNIAVEHSGYSVFTGVGERTREGNDFYHE-MNDSQVLDKVSLVYGQMNEPPGNRLRVAFT 228 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 +TIAE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI Sbjct: 229 GLTIAEKFRDEGKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI 288 Query: 298 GPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASV 357 + + G+IT+V +V V D+ DP + + LD + L+R +A G YP +DPL S Sbjct: 289 --TSTKNGSITSVQAVYVPADDLTDPSPATTFAHLDSTVTLSRQIASLGIYPAIDPLNST 346 Query: 358 SRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 SR D DE + + ++ R++E +DI I G Sbjct: 347 SRQLDPYIVGDEHYETALGVQSILQRYQELKDIIAILG 384 >gi|238793102|ref|ZP_04636730.1| ATP synthase subunit beta [Yersinia intermedia ATCC 29909] gi|238727475|gb|EEQ19001.1| ATP synthase subunit beta [Yersinia intermedia ATCC 29909] Length = 435 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I + P + +TGI+V+D+ P G Sbjct: 60 LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 118 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|238783022|ref|ZP_04627049.1| ATP synthase subunit beta [Yersinia bercovieri ATCC 43970] gi|238716023|gb|EEQ08008.1| ATP synthase subunit beta [Yersinia bercovieri ATCC 43970] Length = 435 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I + P + +TGI+V+D+ P G Sbjct: 60 LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 118 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|228478238|ref|ZP_04062846.1| ATP synthase F1, beta subunit [Streptococcus salivarius SK126] gi|312864308|ref|ZP_07724542.1| ATP synthase F1, beta subunit [Streptococcus vestibularis F0396] gi|322517276|ref|ZP_08070153.1| ATP synthase F1 sector beta subunit [Streptococcus vestibularis ATCC 49124] gi|228249917|gb|EEK09187.1| ATP synthase F1, beta subunit [Streptococcus salivarius SK126] gi|311100309|gb|EFQ58518.1| ATP synthase F1, beta subunit [Streptococcus vestibularis F0396] gi|322124106|gb|EFX95645.1| ATP synthase F1 sector beta subunit [Streptococcus vestibularis ATCC 49124] Length = 468 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFADDAEREPIHKKAPTFDELSTSTEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR +E V++ + ++ R+ E +DI I G Sbjct: 327 NLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILG 385 >gi|157144366|ref|YP_001451685.1| F0F1 ATP synthase subunit beta [Citrobacter koseri ATCC BAA-895] gi|166201697|sp|A8ACN6|ATPB_CITK8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157081571|gb|ABV11249.1| hypothetical protein CKO_00070 [Citrobacter koseri ATCC BAA-895] Length = 460 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|158524732|gb|ABW71260.1| mitochondrial ATP synthase beta subunit [Novocrania anomala] Length = 428 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 152/289 (52%), Gaps = 16/289 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID + K D + I + P ++ ++ TGI+V+ Sbjct: 55 IRIPVGPETLGRIINVIGEPIDERGEV-KTDKYLSIHADAPEFVDMNVAQEILVTGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 173 MIESGVISLKDKSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 DP + + LD VL+R +AE G YP VDPL S SR+ D +E Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGEE 339 >gi|326203255|ref|ZP_08193120.1| ATP synthase F1, beta subunit [Clostridium papyrosolvens DSM 2782] gi|325986513|gb|EGD47344.1| ATP synthase F1, beta subunit [Clostridium papyrosolvens DSM 2782] Length = 464 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + + + + P++ QR +TGI+V+D+ P Sbjct: 87 LGRIFNVLGEPVDKAGPVTP--TAYLPIHREAPSLEEQRPSTEILETGIKVVDLLAPYAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LK 215 G +IG+F G+G+GK+ L+ R+ + I + VGER RE + D + D+ ++ Sbjct: 145 GGKIGLFGGAGVGKTVLIMELIRNIATEHGGYSIFTGVGERTREGNDLWHD-MNDSGVIE 203 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ G Sbjct: 204 KTAMVFGQMNEPPGARMRVGLTGLTMAEYFRDQMGQDVLLFIDNIFRFVQAGSEVSALLG 263 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +++ L ERI + KG+IT+V +V V D+ DP + + LD Sbjct: 264 RIPSAVGYQPTLATDVGALQERI--ASTNKGSITSVQAVYVPADDLTDPAPATTFAHLDA 321 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 VL+R + G YP VDPL S SR+ D +E V+ + ++ R +E +DI I Sbjct: 322 TTVLSRDIVAMGIYPAVDPLESTSRILDPKVVGEEHYAVARRVQEILQRNKELQDIIAIL 381 Query: 394 G 394 G Sbjct: 382 G 382 >gi|117619208|ref|YP_858679.1| F0F1 ATP synthase subunit beta [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|166201687|sp|A0KQX8|ATPB_AERHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|117560615|gb|ABK37563.1| ATP synthase F1, beta subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 462 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I P ++ +TGI+VID+ P G Sbjct: 87 LGRIMNVLGDPIDEKGPIGEEE-RWSIHRAAPSYEDQSNSNDLLETGIKVIDLVCPFAKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + + N L K Sbjct: 146 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMMESNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 206 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 265 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 266 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 323 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E + + ++ R++E +DI I G Sbjct: 324 LSRQIAALGIYPAVDPLDSTSRQLDPLVVGKEHYETARGVQTVLQRYKELKDIIAILG 381 >gi|323137978|ref|ZP_08073052.1| ATP synthase F1, beta subunit [Methylocystis sp. ATCC 49242] gi|322396697|gb|EFX99224.1| ATP synthase F1, beta subunit [Methylocystis sp. ATCC 49242] Length = 478 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 22/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+IN +G+P+D L + + + P+ Q E +TGI+V+D+ P Sbjct: 88 LGRIINVIGEPVDEAGPLVTAN--KRAIHQPAPSYAEQATEAQILETGIKVVDLLAPYAK 145 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL--GDNL 214 G +IG+F G+G+GK+ L+ + A++ V VGER RE + + + G N Sbjct: 146 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVNK 204 Query: 215 K---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 K K+ +V +E P R LT +T+AE+F +G +VL +D+I RF + Sbjct: 205 KPVNGSAAGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQA 264 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 265 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPAP 322 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+RS+AE+G YP VDPL S SR+ A +E ++ + + R++ Sbjct: 323 ATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAIVGEEHYEVARKVQSTLQRYK 382 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 383 SLQDIIAILG 392 >gi|296157535|ref|ZP_06840370.1| ATP synthase F1, beta subunit [Burkholderia sp. Ch1-1] gi|295892307|gb|EFG72090.1| ATP synthase F1, beta subunit [Burkholderia sp. Ch1-1] Length = 464 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D+ I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-NSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E ++ + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYAITRGVQQTLQRYKELRDIIAILG 382 >gi|149183570|ref|ZP_01861992.1| F0F1 ATP synthase subunit beta [Bacillus sp. SG-1] gi|148848711|gb|EDL62939.1| F0F1 ATP synthase subunit beta [Bacillus sp. SG-1] Length = 472 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/302 (31%), Positives = 160/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID ++ + K I + P + +TGI+V+D+ P Sbjct: 89 VTLGRVFNVLGETIDLEEEIDKSARRDPIHREAPKFDQLSTEVEILETGIKVVDLLAPYI 148 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + + D+ + Sbjct: 149 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGLSVFAGVGERTREGNDLYHE-MSDSGVI 207 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 208 KKTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFVDNIFRFTQAGSEVSALL 267 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +++ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 268 GRMPSAVGYQPTLATDMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 325 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L+E G YP VDPLAS SR L+ + + + + + R++E +DI I Sbjct: 326 ATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYNVARQVQQTLQRYKELQDIIAI 385 Query: 393 GG 394 G Sbjct: 386 LG 387 >gi|328885072|emb|CCA58311.1| ATP synthase beta chain [Streptomyces venezuelae ATCC 10712] Length = 480 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/327 (31%), Positives = 172/327 (52%), Gaps = 15/327 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LG+ ++ D+S I K P + + F+TG++V+D+ TP G Sbjct: 101 GRVFNTLGQVLNADESTVADAPRWTIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREF-IEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + D V + + VGER RE + +E L K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIVRVAKLHDGVSVFAGVGERTREGNDLMVEMEEAGVLDKTA 220 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 221 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 280 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 281 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R ++E+G YP VDPL S SR+ D + A D + + ++ ++++ +DI I Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYDAATRVKGILQKYKDLQDIIAI---- 394 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 395 LGIDELSEEDKLVVHRARRVERFLSQN 421 >gi|300916399|ref|ZP_07133139.1| ATP synthase F1, beta subunit [Escherichia coli MS 115-1] gi|300416303|gb|EFJ99613.1| ATP synthase F1, beta subunit [Escherichia coli MS 115-1] Length = 460 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|238787862|ref|ZP_04631659.1| ATP synthase subunit beta [Yersinia frederiksenii ATCC 33641] gi|238724205|gb|EEQ15848.1| ATP synthase subunit beta [Yersinia frederiksenii ATCC 33641] Length = 435 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I + P + +TGI+V+D+ P G Sbjct: 60 LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 118 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|124383817|ref|YP_001027567.1| F0F1 ATP synthase subunit beta [Burkholderia mallei NCTC 10229] gi|167582834|ref|ZP_02375708.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis TXDOH] gi|167620974|ref|ZP_02389605.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis Bt4] gi|167721822|ref|ZP_02405058.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei DM98] gi|167740794|ref|ZP_02413568.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 14] gi|167818009|ref|ZP_02449689.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 91] gi|167826372|ref|ZP_02457843.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 9] gi|167847891|ref|ZP_02473399.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei B7210] gi|167896448|ref|ZP_02483850.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 7894] gi|167904850|ref|ZP_02492055.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei NCTC 13177] gi|167913128|ref|ZP_02500219.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei 112] gi|167921065|ref|ZP_02508156.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei BCC215] gi|254206873|ref|ZP_04913224.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU] gi|254357427|ref|ZP_04973701.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280] gi|190358265|sp|A2S6J8|ATPB_BURM9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|124291837|gb|ABN01106.1| ATP synthase F1, beta subunit [Burkholderia mallei NCTC 10229] gi|147752415|gb|EDK59481.1| ATP synthase F1, beta subunit [Burkholderia mallei JHU] gi|148026491|gb|EDK84576.1| ATP synthase F1, beta subunit [Burkholderia mallei 2002721280] Length = 459 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 84 GRIMDVLGRPIDEAGPI-ESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 142 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 377 >gi|254201537|ref|ZP_04907901.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH] gi|147747431|gb|EDK54507.1| ATP synthase F1, beta subunit [Burkholderia mallei FMH] Length = 469 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 94 GRIMDVLGRPIDEAGPI-ESENKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 152 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 153 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 212 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 271 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 272 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 329 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 330 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 387 >gi|126656480|ref|ZP_01727741.1| F0F1 ATP synthase subunit beta [Cyanothece sp. CCY0110] gi|126622166|gb|EAZ92873.1| F0F1 ATP synthase subunit beta [Cyanothece sp. CCY0110] Length = 483 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 103/308 (33%), Positives = 160/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +G + S I P K F+TGI+VID+ TP Sbjct: 95 ATLGRIFNVLGEPVDEMGDVGNEETS-PIHRPAPKLTELSTKPKVFETGIKVIDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210 G +IG+F G+G+GK+ ++ + +S+ VGER RE E IE + Sbjct: 154 QGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFAGVGERTREGNDLYNEMIESKVIN 213 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DNL +S +V +E P R L+ +T+AEYF +VLL +D+I RF + Sbjct: 214 PDNLSESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+R+LA +G YP VDPL S S + DE ++ + R++E Sbjct: 332 TFAHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPNIVGDEHYDTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|4388534|emb|CAA75478.1| F1-ATP synthase, beta subunit [Sorghum bicolor] Length = 454 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 164/313 (52%), Gaps = 25/313 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+PID +GD++ + I + P + + ++ TGI+V+D+ Sbjct: 80 ATLGRIINVIGEPIDE-----RGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 134 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + + + VGER RE RE IE Sbjct: 135 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIES 194 Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF Sbjct: 195 GVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 254 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ D Sbjct: 255 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 312 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381 P + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 313 PAPATTYAHLDATTVLSRQISERGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQ 372 Query: 382 RFEETRDIRLIGG 394 +++ +DI I G Sbjct: 373 KYKNLQDIIAILG 385 >gi|242241509|ref|ZP_04795954.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis W23144] gi|242235052|gb|EES37363.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis W23144] gi|319399587|gb|EFV87842.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis FRI909] Length = 470 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID D+ + I + P + +TGI+V+D+ P Sbjct: 87 VTLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFDELSTKVEILETGIKVVDLLAPYI 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ + Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVI 205 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 KKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 265 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI S KG++T++ +V V D++ DP + + LD Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQAVFVPADDYTDPAPATTFAHLD 323 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR + + E V+ + + ++ E +DI I Sbjct: 324 STTNLERKLTEMGIYPAVDPLASTSRALEPSVVGQEHYDVAREVQSTLQKYRELQDIIAI 383 Query: 393 GG 394 G Sbjct: 384 LG 385 >gi|226952190|ref|ZP_03822654.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ATCC 27244] gi|294648871|ref|ZP_06726327.1| ATP synthase F1 beta subunit [Acinetobacter haemolyticus ATCC 19194] gi|226837028|gb|EEH69411.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ATCC 27244] gi|292825262|gb|EFF84009.1| ATP synthase F1 beta subunit [Acinetobacter haemolyticus ATCC 19194] Length = 464 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 161/307 (52%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + + I + P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDEAGPVATEE-RLPIHREAPSYAEQAASTDLLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD +VL+R +A +G YP +DPL S SR D E ++ S+ +++ R++E + Sbjct: 317 FAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELK 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|220927118|ref|YP_002502420.1| F0F1 ATP synthase subunit beta [Methylobacterium nodulans ORS 2060] gi|219951725|gb|ACL62117.1| ATP synthase F1, beta subunit [Methylobacterium nodulans ORS 2060] Length = 484 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/320 (31%), Positives = 162/320 (50%), Gaps = 23/320 (7%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRV 151 R+ A GR++N +G+PID + S + + P Q E TGI+V Sbjct: 86 IRVPVGANTLGRIMNVIGEPIDEAGEIAAE--SYRAIHQPAPTYAEQSTEAQILVTGIKV 143 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203 +D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 144 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHSGYSVFAG-VGERTREGNDLYH 202 Query: 204 EFIEDYLGDNLK--------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 E IE + + K K +V +E P R LT +T+AE+F +G +VL Sbjct: 203 EMIESKVNMDPKEHGSAEGSKCALVYGQMNEPPGARARVALTGLTVAEHFRDEGQDVLFF 262 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V Sbjct: 263 VDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSITSVQAIYV 320 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS- 374 D+ DP + + LD VL+RS+AE+G YP VDPL S SR+ +E V+ Sbjct: 321 PADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPTILGEEHYNVAR 380 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + ++ R++ +DI I G Sbjct: 381 RVQQVLQRYKALQDIIAILG 400 >gi|112791342|gb|ABI21941.1| ATP synthase beta subunit [Shigella flexneri] gi|112791346|gb|ABI21943.1| ATP synthase beta subunit [Escherichia coli DSM 30083] Length = 421 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354 >gi|332764011|gb|EGJ94248.1| ATP synthase F1, beta subunit [Shigella flexneri 2930-71] Length = 435 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFTHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354 >gi|309784443|ref|ZP_07679082.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1617] gi|308927950|gb|EFP73418.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1617] Length = 435 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354 >gi|295098944|emb|CBK88033.1| ATP synthase F1 subcomplex beta subunit [Eubacterium cylindroides T2-87] Length = 467 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/303 (34%), Positives = 164/303 (54%), Gaps = 13/303 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTP 157 GR+ N LG+PIDG LG+ D+ E + + PA + Q V +TGI+VID+ P Sbjct: 86 AILGRMFNVLGRPIDG---LGEVKDVEYEPIHRPAPAFDEQSTVSVPLETGIKVIDLLCP 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + K ++ VGER RE + + Sbjct: 143 YAKGGKIGLFGGAGVGKTVLIQELIHNIAKEHGGKSVVVGVGERTREGNDMYHEMKESGV 202 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATN 272 L K+V+V +ESP R LT +T+AE+F K +VLL +D+I RF + E++ Sbjct: 203 LDKTVLVYGQMNESPGARMRVGLTGLTMAEHFRDKEHQDVLLFIDNIFRFTQAGSEVSAL 262 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ +L ERI + G+IT+V ++ V D+ DP + + L Sbjct: 263 LGRVPSAVGYQPTLATEMGQLQERI--TSTNDGSITSVQAIYVPADDLTDPAPATAFTHL 320 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391 D VL+R +A G YP VDPL S SR+ D + V+ + ++ R++E +DI Sbjct: 321 DAKTVLDRDIAALGIYPAVDPLESSSRILDPLVVGERHYNVARGVQSILQRYKELQDIIA 380 Query: 392 IGG 394 I G Sbjct: 381 ILG 383 >gi|258690474|gb|ACV87999.1| ATP synthase beta subunit [Suberites sp. KJP-2009] Length = 426 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 162/317 (51%), Gaps = 21/317 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 +I GR++N +G+PID + K ++ I ++ P + ++ TGI+V+ Sbjct: 54 IKIPVGPMTLGRIMNVIGEPIDERGPI-KAEMQAAIHAEAPEFVEMSTQQEILVTGIKVV 112 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREVREFI 206 D+ P G +IG+F G+G+GK+ ++ A C + + VGER RE + Sbjct: 113 DLLAPYAKGGKIGLFGGAGVGKTVVIMELINNVAHAHGGC---SVFAGVGERTREGNDLY 169 Query: 207 EDY-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258 + L D+ K +V +E P R L+ +T+AEYF K G +VLL +D+ Sbjct: 170 HEMIQGGVISLKDDTSKVALVYGQMNEPPGARARVALSGLTVAEYFRDKEGQDVLLFIDN 229 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +++ + ERI + KG+IT+V +V V D Sbjct: 230 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTLKGSITSVQAVFVPAD 287 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH 378 + DP + + LD VL+R+++E G YP VDPL S SR+ D +E V+ T Sbjct: 288 DLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRIMDPNIVGEEHYNVARGTQ 347 Query: 379 -LIHRFEETRDIRLIGG 394 ++ + +DI I G Sbjct: 348 KILQDYRSLQDIIAILG 364 >gi|34500030|gb|AAQ73597.1| ATP synthase beta subunit [Pasteurella pneumotropica] Length = 444 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDERGEIG-AEENWSIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|56415733|ref|YP_152808.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197364661|ref|YP_002144298.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|81599724|sp|Q5PKX2|ATPB_SALPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740672|sp|B5BIN6|ATPB_SALPK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|56129990|gb|AAV79496.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096138|emb|CAR61734.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 460 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|54301816|ref|YP_131809.1| F0F1 ATP synthase subunit beta [Photobacterium profundum SS9] gi|81828635|sp|Q6LKZ6|ATPB2_PHOPR RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|46915236|emb|CAG22009.1| putative ATP synthase F1, beta subunit [Photobacterium profundum SS9] Length = 461 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 158/298 (53%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G+ S I + P ++ + +TG++VID+ P G Sbjct: 87 GRIMNVLGQPIDECGEIGQ-KTSYPIHREPPSYEDQANSTELLETGVKVIDLICPFAKGG 145 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + KG+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTHKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D + + + ++ R++E +DI I G Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGVEHYDVARGVQTVLQRYKELKDIIAILG 380 >gi|16762461|ref|NP_458078.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16767149|ref|NP_462764.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29143949|ref|NP_807291.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62182347|ref|YP_218764.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161505610|ref|YP_001572722.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|161616985|ref|YP_001590950.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|168263239|ref|ZP_02685212.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168464800|ref|ZP_02698692.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|194444846|ref|YP_002043111.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450391|ref|YP_002047894.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471110|ref|ZP_03077094.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734293|ref|YP_002116806.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251677|ref|YP_002148800.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263502|ref|ZP_03163576.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|198245365|ref|YP_002217811.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200387213|ref|ZP_03213825.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204928445|ref|ZP_03219644.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207859088|ref|YP_002245739.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|213052670|ref|ZP_03345548.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427470|ref|ZP_03360220.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213586049|ref|ZP_03367875.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213857970|ref|ZP_03384941.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|224585660|ref|YP_002639459.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|238913118|ref|ZP_04656955.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|289826259|ref|ZP_06545371.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|75505463|sp|Q57HX9|ATPB_SALCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81832703|sp|Q7CPE2|ATPB_SALTY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81849133|sp|Q8XGX4|ATPB_SALTI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081341|sp|A9MJR9|ATPB_SALAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081342|sp|A9MXA6|ATPB_SALPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740666|sp|B5EYZ6|ATPB_SALA4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740667|sp|B5FN33|ATPB_SALDC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740668|sp|B5QUS4|ATPB_SALEP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740670|sp|B4TAX2|ATPB_SALHS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740671|sp|B4SYD1|ATPB_SALNS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740673|sp|B4TN31|ATPB_SALSV RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808162|sp|C0Q2N2|ATPB_SALPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|25290439|pir||AF0954 ATP synthase beta chain [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16422439|gb|AAL22723.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16504766|emb|CAD03130.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica serovar Typhi] gi|29139585|gb|AAO71151.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|62129980|gb|AAX67683.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|160866957|gb|ABX23580.1| hypothetical protein SARI_03786 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] gi|161366349|gb|ABX70117.1| hypothetical protein SPAB_04806 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403509|gb|ACF63731.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408695|gb|ACF68914.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457474|gb|EDX46313.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194709795|gb|ACF89016.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195632484|gb|EDX50968.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197215380|gb|ACH52777.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241757|gb|EDY24377.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197939881|gb|ACH77214.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199604311|gb|EDZ02856.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204321878|gb|EDZ07076.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205348072|gb|EDZ34703.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206710891|emb|CAR35255.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224470188|gb|ACN48018.1| ATP synthase subunit B [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261249005|emb|CBG26863.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996152|gb|ACY91037.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160397|emb|CBW19923.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312914996|dbj|BAJ38970.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320088290|emb|CBY98051.1| ATP synthase F1, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321222161|gb|EFX47234.1| ATP synthase beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322617222|gb|EFY14127.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619090|gb|EFY15976.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625157|gb|EFY21985.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322630208|gb|EFY26979.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322634367|gb|EFY31101.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322635251|gb|EFY31966.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642872|gb|EFY39457.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645076|gb|EFY41606.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650425|gb|EFY46837.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653617|gb|EFY49944.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322661555|gb|EFY57778.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322661637|gb|EFY57856.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669799|gb|EFY65941.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671992|gb|EFY68111.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322674997|gb|EFY71083.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683687|gb|EFY79700.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686074|gb|EFY82059.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322716839|gb|EFZ08410.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323132227|gb|ADX19657.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192009|gb|EFZ77246.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323200503|gb|EFZ85581.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202732|gb|EFZ87769.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208309|gb|EFZ93250.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211744|gb|EFZ96577.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323218606|gb|EGA03313.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220007|gb|EGA04477.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323224778|gb|EGA09043.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323232514|gb|EGA16616.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323235289|gb|EGA19374.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323241077|gb|EGA25114.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241374|gb|EGA25406.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248604|gb|EGA32534.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323252097|gb|EGA35957.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258599|gb|EGA42262.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262369|gb|EGA45927.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323268206|gb|EGA51682.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270620|gb|EGA54065.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326625597|gb|EGE31942.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332990714|gb|AEF09697.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 460 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|302554177|ref|ZP_07306519.1| ATP synthase F1, beta subunit [Streptomyces viridochromogenes DSM 40736] gi|302471795|gb|EFL34888.1| ATP synthase F1, beta subunit [Streptomyces viridochromogenes DSM 40736] Length = 478 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/327 (31%), Positives = 175/327 (53%), Gaps = 17/327 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ D+S S I K P + + F+TG++V+D+ TP G Sbjct: 101 GKVFNTLGEVLNSDESYDGERWS--IHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 158 Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ M R ++ + V + + VGER RE + I + L K+ Sbjct: 159 KIGLFGGAGVGKTVLIQEMIMRVANLHEGVSVFAGVGERTREGNDLIAEMEESGVLDKTA 218 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 219 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 278 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 279 SAVGYQPNLADEMGTLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATTV 336 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R ++E+G YP VDPL S SR+ D + SAD + +++ ++++ +DI I Sbjct: 337 LSRPISEKGIYPAVDPLDSTSRILDPRYISADHYNAAMRVKNILQKYKDLQDIIAI---- 392 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 393 LGIDELGEEDKLVVHRARRVERFLSQN 419 >gi|289677992|ref|ZP_06498882.1| type III secretion cytoplasmic ATPase HrcN [Pseudomonas syringae pv. syringae FF5] Length = 195 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 84/192 (43%), Positives = 119/192 (61%), Gaps = 7/192 (3%) Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARG-YPTSVFSELPRLLERIGPSEKEKG 305 ++G VLL+LDS+TRFA + REI SGE P+ RG P SV++ LPRL+ER G SE G Sbjct: 1 ARGQKVLLLLDSLTRFARAQREIGIASGE-PLGRGGLPPSVYTLLPRLVERAGMSEN--G 57 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +ITA+ +VL++ D+ NDP+AD VRS+LDGHIVL+R LAE G YP +D AS+SR+ Sbjct: 58 SITALYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVT 117 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLS 425 + ++ + L L+ +++ + +G Y+ G D + D AV I FL+Q DL Sbjct: 118 GREHQRANNRLRQLLAAYKQVEMLLRLGEYQAGADPVTDCAVQLNEAINAFLRQ---DLR 174 Query: 426 SEDVFQEITKKL 437 QE +L Sbjct: 175 EPVPLQETLDRL 186 >gi|308234027|ref|ZP_07664764.1| ATP synthase F1, beta subunit [Atopobium vaginae DSM 15829] gi|328944381|ref|ZP_08241843.1| ATP synthase F1 sector beta subunit [Atopobium vaginae DSM 15829] gi|327490965|gb|EGF22742.1| ATP synthase F1 sector beta subunit [Atopobium vaginae DSM 15829] Length = 491 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 161/301 (53%), Gaps = 16/301 (5%) Query: 103 GRVINALGKPIDGDDSLGKG---DLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GRV N +G+P+DG KG D+ + PA + + F+TGI+ ID+ P Sbjct: 112 GRVWNVMGEPVDG-----KGIPSDVDYYPIHHPAPAFDELTTQTEIFETGIKSIDLLEPY 166 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNL 214 G + G+F G+G+GK+ L+ + + + + VGER RE + ++E + Sbjct: 167 VRGGKTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMTESGVI 226 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L +T AEYF +G +VLL +D+I RF+ + E++ G Sbjct: 227 NKTCLVYGQMNEPPGARLRVGLAGLTTAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLG 286 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 287 RMPSAVGYQPTLATEMGDLQERI--TSTKEGSITSVQAVYVPADDLTDPAPATTFTHLDA 344 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 VL+RS+ E G YP VDPLAS S D + +E ++ ++ ++ ++ + +DI I Sbjct: 345 TTVLSRSITELGIYPAVDPLASSSSALDPSIVGEEHYRVAMAVQEILQQYSDLQDIIAIL 404 Query: 394 G 394 G Sbjct: 405 G 405 >gi|291456007|ref|ZP_06595397.1| ATP synthase F1, beta subunit [Bifidobacterium breve DSM 20213] gi|291382416|gb|EFE89934.1| ATP synthase F1, beta subunit [Bifidobacterium breve DSM 20213] Length = 490 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 94/270 (34%), Positives = 154/270 (57%), Gaps = 12/270 (4%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 137 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 196 Query: 192 ISL---VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 +S+ VGER RE + I + +G+ L+K+ +V DE P R PLTA+T+AEYF Sbjct: 197 VSVFAGVGERTREGNDLIGE-MGEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFR 255 Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 256 DVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGH 313 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 314 SITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRY 373 Query: 366 SADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 374 VGQAHYECANRVKAILQRNKELQDIIALIG 403 >gi|212696102|ref|ZP_03304230.1| hypothetical protein ANHYDRO_00638 [Anaerococcus hydrogenalis DSM 7454] gi|212676731|gb|EEB36338.1| hypothetical protein ANHYDRO_00638 [Anaerococcus hydrogenalis DSM 7454] Length = 457 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/354 (29%), Positives = 178/354 (50%), Gaps = 23/354 (6%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID-G 115 +GQV++I+ + V + G ++ SL D+V F I + GR N + +PID G Sbjct: 40 IGQVVKIDDETVTVEVFGNTQDFSLNDIVVEFEEKPLEIPLNESILGRTFNGIARPIDDG 99 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + S+E P A R+ +TGI IDI T L GQ++ +F+GSG+ + Sbjct: 100 GEIYSDKFYSVEGNPLNPVA--REYPRNFIQTGISSIDILTTLIRGQKLPIFSGSGMPHN 157 Query: 176 TLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDES 227 + + R CF + + +G + E F + + +K VV+ + Sbjct: 158 EIAAQIVRQAKLKTNEDFCF---VFAAMGIKKDEAMFFEDAFTKAGVKDKVVMYENLADD 214 Query: 228 PILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 PI+ ++ P A+T AEY + K +VL+I+ IT +A ++RE+++ E+P +GYP Sbjct: 215 PIMERLITPKCALTAAEYLAFEKNKHVLVIITDITSYAEALREVSSIRQEVPSRKGYPGY 274 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 ++S+L L ER G E G++T + + + D+ PI D I +G IV++R L ++ Sbjct: 275 LYSDLASLYERAGMIEGVNGSVTLIPILTMPNDDITHPIPDLTGYITEGQIVIDRMLDQK 334 Query: 346 GRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 G YPP++ L S+SRL + D + L++ L + +E R+I I G Sbjct: 335 GIYPPINVLPSLSRLMKDGIGEGYTRKDHEDLMNQLYESYSKVQEIRNISQIVG 388 >gi|91785733|ref|YP_560939.1| F0F1 ATP synthase subunit beta [Burkholderia xenovorans LB400] gi|118573517|sp|Q13SQ2|ATPB2_BURXL RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|91689687|gb|ABE32887.1| ATP synthase F1 subcomplex beta subunit [Burkholderia xenovorans LB400] Length = 464 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D+ I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-NSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382 >gi|205354552|ref|YP_002228353.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|226740669|sp|B5RFW3|ATPB_SALG2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|205274333|emb|CAR39357.1| ATP synthase beta subunit [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326629687|gb|EGE36030.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 460 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|170718139|ref|YP_001785168.1| F0F1 ATP synthase subunit beta [Haemophilus somnus 2336] gi|226740206|sp|B0UWG5|ATPB_HAES2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|168826268|gb|ACA31639.1| ATP synthase F1, beta subunit [Haemophilus somnus 2336] Length = 457 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEKGEIGAEEY-WAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|242279704|ref|YP_002991833.1| F0F1 ATP synthase subunit beta [Desulfovibrio salexigens DSM 2638] gi|242122598|gb|ACS80294.1| alternate F1F0 ATPase, F1 subunit beta [Desulfovibrio salexigens DSM 2638] Length = 457 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 112/318 (35%), Positives = 165/318 (51%), Gaps = 14/318 (4%) Query: 81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 ++ GD+V G R GRV+N G P+DG D D+ + P ++R+ Sbjct: 64 LARGDVVHCNGETLRTPVGEDLLGRVLNVFGDPVDGKDL--PSDVEFRSIHNQPIELSRR 121 Query: 140 RV-EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195 V E+ F TGI+VID+ PL G + G+F G+G+GK+ L++ + IS+ + Sbjct: 122 VVSEEIFTTGIKVIDLLMPLEKGGKAGLFGGAGVGKTVLITELINNMVGAHSGISIFCGI 181 Query: 196 GERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNV 252 GER RE E + +GD L +V+V +E P R TA+TIAEYF +G +V Sbjct: 182 GERCREGEELYRE-MGDAGVLDNTVMVFGQMNEPPGARFRTGHTAMTIAEYFRDDQGKDV 240 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LL++D+I RF + E++ G LP GY ++ S+L L ERI S G IT++ + Sbjct: 241 LLLIDNIFRFIQAGMELSGLLGRLPSRMGYQPTLGSDLAELQERI--SSSSSGAITSIQA 298 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL 372 V V D+ DP A S L IVL+R A EG YP VDPL S S + A Sbjct: 299 VYVPADDLTDPAATHTFSHLSSSIVLSRKRAGEGFYPAVDPLESRSMMLSPAIVGQRHYD 358 Query: 373 VS-SLTHLIHRFEETRDI 389 V+ + + ++E+ +DI Sbjct: 359 VAREVRRTLAQYEDLKDI 376 >gi|18253303|gb|AAL66415.1|AF368465_5 proton-translocating ATPase beta subunit [Streptococcus pneumoniae] Length = 468 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + I K P + +TGI+VID+ P G Sbjct: 89 LGRVFNVLGDTIDLEAPFTEDAERQPIHKKAPTFDELSTSSEILETGIKVIDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + IS+ VGER RE + + E ++K+ Sbjct: 149 GKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYWEMKESGVIEKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + L+ Sbjct: 269 PSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATAFAHLNSTT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L + G YP VDPLAS SR LA + + + + + ++ R+ E +DI I G Sbjct: 327 NLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKRVLQRYHELQDIIAILG 385 >gi|291460685|ref|ZP_06600075.1| ATP synthase F1, beta subunit [Oribacterium sp. oral taxon 078 str. F0262] gi|291416644|gb|EFE90363.1| ATP synthase F1, beta subunit [Oribacterium sp. oral taxon 078 str. F0262] Length = 474 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/331 (31%), Positives = 174/331 (52%), Gaps = 17/331 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 AC GR+ N LG+P+D + K + I P ++ + +TGI+V+D+ P Sbjct: 96 ACL-GRIFNLLGEPVD-EKPAPKTEERWAIHRPAPSFEDQTPATEILETGIKVVDLICPY 153 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + L Sbjct: 154 AKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGISVFTGVGERTREGNDLYGEMKESGVL 213 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R L+ +T+AEYF + +VLL +D+I RF + E++ Sbjct: 214 DKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDERNQDVLLFIDNIFRFTQAGSEVSALL 273 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +++ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 274 GRMPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLD 331 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 VL+R +A +G YP VDPL S SR L + + ++ ++ ++ R++E +DI I Sbjct: 332 ATTVLSRDIASKGIYPAVDPLDSTSRILTPEVVGQEHYEIARAVQQVLQRYKELQDIIAI 391 Query: 393 GGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ V++ I +FL QS Sbjct: 392 ----MGMDELSEEDKITVYRARKIQNFLSQS 418 >gi|262199221|ref|YP_003270430.1| ATP synthase F1 subunit beta [Haliangium ochraceum DSM 14365] gi|262082568|gb|ACY18537.1| ATP synthase F1, beta subunit [Haliangium ochraceum DSM 14365] Length = 481 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 168/308 (54%), Gaps = 21/308 (6%) Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLC 159 GR++N +G P+DG + K L++ + PP +Q V + F+TGI+VID+ P Sbjct: 95 LGRILNVVGDPVDGFGPIEAKERLAIH---RPPPVFTQQSVTVEAFETGIKVIDLLAPYR 151 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ L++ A+ + + + VGER RE E + L Sbjct: 152 RGGKIGLFGGAGVGKTVIIMELINNVAKKHG-GRSVFAGVGERTREGNDLWHEMNDSKLS 210 Query: 212 DN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 D L+ + +V +E P R L+A+TIAEYF + +VLL +D+I RF + Sbjct: 211 DGSTVLQNAALVYGQMNEPPGARARVGLSALTIAEYFRDQEKQDVLLFVDNIFRFTQAGS 270 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ +L ERI + +G+IT+V ++ V D+ DP + Sbjct: 271 EVSALLGRIPSAVGYQPTLSTEMGQLQERI--TSTTEGSITSVQAIYVPADDLTDPAPAT 328 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VLNR+++E+G YP VDPL S S L+ ++ + ++ R+++ Sbjct: 329 AFAHLDATTVLNRAISEKGIYPAVDPLDSTSTILSPDVVGERHYRVAREVQQVLQRYKDL 388 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 389 QDIIAILG 396 >gi|114777383|ref|ZP_01452380.1| F0F1 ATP synthase subunit beta [Mariprofundus ferrooxydans PV-1] gi|114552165|gb|EAU54667.1| F0F1 ATP synthase subunit beta [Mariprofundus ferrooxydans PV-1] Length = 462 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 159/299 (53%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG ID + + I + P + +TGI+VID+ P+ G Sbjct: 82 LGRIMNVLGTGIDFQGEAVECEERWAIHREPPRFEELAPASEILETGIKVIDLMAPIAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHGGFSVFAG-VGERTREGNDFYYEMKESNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VL+ +D+I R++ + E++ G + Sbjct: 201 VALVYGQMNEPPGNRLRVALTGLTMAEYFRDEGRDVLIFIDNIYRYSLAGVEVSALLGRM 260 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD I Sbjct: 261 PSAVGYQPTLAEEMGKLQERI--ASTKTGSITSVQAVYVPADDLTDPAPATTFAHLDSTI 318 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR D K ++ + ++ + R++E +DI I G Sbjct: 319 VLSRQIAELGIYPAVDPLDSTSRQLDPKVVGSEHYDIAINVQQTLQRYKELQDIIAILG 377 >gi|187925863|ref|YP_001897505.1| F0F1 ATP synthase subunit beta [Burkholderia phytofirmans PsJN] gi|187717057|gb|ACD18281.1| ATP synthase F1, beta subunit [Burkholderia phytofirmans PsJN] Length = 464 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D+ I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-NSDVVRGIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382 >gi|15804332|ref|NP_290371.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 EDL933] gi|15833928|ref|NP_312701.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str. Sakai] gi|16131600|ref|NP_418188.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|24115035|ref|NP_709545.1| F0F1 ATP synthase subunit beta [Shigella flexneri 2a str. 301] gi|26250476|ref|NP_756516.1| F0F1 ATP synthase subunit beta [Escherichia coli CFT073] gi|30064963|ref|NP_839134.1| F0F1 ATP synthase subunit beta [Shigella flexneri 2a str. 2457T] gi|74314242|ref|YP_312661.1| F0F1 ATP synthase subunit beta [Shigella sonnei Ss046] gi|82546107|ref|YP_410054.1| F0F1 ATP synthase subunit beta [Shigella boydii Sb227] gi|89110275|ref|AP_004055.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli str. K-12 substr. W3110] gi|91213257|ref|YP_543243.1| F0F1 ATP synthase subunit beta [Escherichia coli UTI89] gi|110644073|ref|YP_671803.1| F0F1 ATP synthase subunit beta [Escherichia coli 536] gi|110807556|ref|YP_691076.1| F0F1 ATP synthase subunit beta [Shigella flexneri 5 str. 8401] gi|117626005|ref|YP_859328.1| F0F1 ATP synthase subunit beta [Escherichia coli APEC O1] gi|157156404|ref|YP_001465223.1| F0F1 ATP synthase subunit beta [Escherichia coli E24377A] gi|168748538|ref|ZP_02773560.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|168753634|ref|ZP_02778641.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|168759932|ref|ZP_02784939.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|168766232|ref|ZP_02791239.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|168772219|ref|ZP_02797226.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|168779967|ref|ZP_02804974.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|168786575|ref|ZP_02811582.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC869] gi|168798780|ref|ZP_02823787.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC508] gi|170022231|ref|YP_001727185.1| F0F1 ATP synthase subunit beta [Escherichia coli ATCC 8739] gi|170083233|ref|YP_001732553.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli str. K-12 substr. DH10B] gi|170681189|ref|YP_001746062.1| F0F1 ATP synthase subunit beta [Escherichia coli SMS-3-5] gi|170766683|ref|ZP_02901136.1| ATP synthase F1, beta subunit [Escherichia albertii TW07627] gi|187732921|ref|YP_001882431.1| F0F1 ATP synthase subunit beta [Shigella boydii CDC 3083-94] gi|188493678|ref|ZP_03000948.1| ATP synthase F1, beta subunit [Escherichia coli 53638] gi|191165806|ref|ZP_03027644.1| ATP synthase F1, beta subunit [Escherichia coli B7A] gi|191170404|ref|ZP_03031957.1| ATP synthase F1, beta subunit [Escherichia coli F11] gi|193063774|ref|ZP_03044861.1| ATP synthase F1, beta subunit [Escherichia coli E22] gi|193069207|ref|ZP_03050164.1| ATP synthase F1, beta subunit [Escherichia coli E110019] gi|194428061|ref|ZP_03060605.1| ATP synthase F1, beta subunit [Escherichia coli B171] gi|194431044|ref|ZP_03063337.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1012] gi|194435783|ref|ZP_03067886.1| ATP synthase F1, beta subunit [Escherichia coli 101-1] gi|195936359|ref|ZP_03081741.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str. EC4024] gi|208807011|ref|ZP_03249348.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208812092|ref|ZP_03253421.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208818898|ref|ZP_03259218.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209400614|ref|YP_002273260.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|209921213|ref|YP_002295297.1| F0F1 ATP synthase subunit beta [Escherichia coli SE11] gi|215489070|ref|YP_002331501.1| F0F1 ATP synthase subunit beta [Escherichia coli O127:H6 str. E2348/69] gi|217324652|ref|ZP_03440736.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|218551266|ref|YP_002385058.1| F0F1 ATP synthase subunit beta [Escherichia fergusonii ATCC 35469] gi|218556303|ref|YP_002389217.1| F0F1 ATP synthase subunit beta [Escherichia coli IAI1] gi|218560807|ref|YP_002393720.1| F0F1 ATP synthase subunit beta [Escherichia coli S88] gi|218692020|ref|YP_002400232.1| F0F1 ATP synthase subunit beta [Escherichia coli ED1a] gi|218697458|ref|YP_002405125.1| F0F1 ATP synthase subunit beta [Escherichia coli 55989] gi|218702582|ref|YP_002410211.1| F0F1 ATP synthase subunit beta [Escherichia coli IAI39] gi|218707378|ref|YP_002414897.1| F0F1 ATP synthase subunit beta [Escherichia coli UMN026] gi|227883954|ref|ZP_04001759.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972] gi|237703533|ref|ZP_04534014.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp. 3_2_53FAA] gi|238902823|ref|YP_002928619.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli BW2952] gi|253775633|ref|YP_003038464.1| F0F1 ATP synthase subunit beta [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254038951|ref|ZP_04873003.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp. 1_1_43] gi|254163684|ref|YP_003046792.1| F0F1 ATP synthase subunit beta [Escherichia coli B str. REL606] gi|254795738|ref|YP_003080575.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str. TW14359] gi|256021246|ref|ZP_05435111.1| F0F1 ATP synthase subunit beta [Shigella sp. D9] gi|256025537|ref|ZP_05439402.1| F0F1 ATP synthase subunit beta [Escherichia sp. 4_1_40B] gi|260846483|ref|YP_003224261.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD [Escherichia coli O103:H2 str. 12009] gi|260857853|ref|YP_003231744.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD [Escherichia coli O26:H11 str. 11368] gi|260870466|ref|YP_003236868.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD [Escherichia coli O111:H- str. 11128] gi|261225889|ref|ZP_05940170.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261258934|ref|ZP_05951467.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD [Escherichia coli O157:H7 str. FRIK966] gi|291285156|ref|YP_003501974.1| ATP synthase subunit beta [Escherichia coli O55:H7 str. CB9615] gi|293407369|ref|ZP_06651291.1| ATP synthase subunit beta [Escherichia coli FVEC1412] gi|293413182|ref|ZP_06655848.1| ATP synthase F1 [Escherichia coli B354] gi|293417205|ref|ZP_06659832.1| ATP synthase F1 [Escherichia coli B185] gi|293464058|ref|ZP_06664472.1| ATP synthase F1 [Escherichia coli B088] gi|298383111|ref|ZP_06992706.1| ATP synthase subunit beta [Escherichia coli FVEC1302] gi|300815013|ref|ZP_07095238.1| ATP synthase F1, beta subunit [Escherichia coli MS 107-1] gi|300824558|ref|ZP_07104668.1| ATP synthase F1, beta subunit [Escherichia coli MS 119-7] gi|300896061|ref|ZP_07114620.1| ATP synthase F1, beta subunit [Escherichia coli MS 198-1] gi|300902986|ref|ZP_07120929.1| ATP synthase F1, beta subunit [Escherichia coli MS 84-1] gi|300925562|ref|ZP_07141435.1| ATP synthase F1, beta subunit [Escherichia coli MS 182-1] gi|300940918|ref|ZP_07155444.1| ATP synthase F1, beta subunit [Escherichia coli MS 21-1] gi|300950648|ref|ZP_07164543.1| ATP synthase F1, beta subunit [Escherichia coli MS 116-1] gi|300958740|ref|ZP_07170857.1| ATP synthase F1, beta subunit [Escherichia coli MS 175-1] gi|300983828|ref|ZP_07176770.1| ATP synthase F1, beta subunit [Escherichia coli MS 200-1] gi|300984354|ref|ZP_07176960.1| ATP synthase F1, beta subunit [Escherichia coli MS 45-1] gi|301020868|ref|ZP_07184927.1| ATP synthase F1, beta subunit [Escherichia coli MS 69-1] gi|301047555|ref|ZP_07194627.1| ATP synthase F1, beta subunit [Escherichia coli MS 185-1] gi|301305619|ref|ZP_07211709.1| ATP synthase F1, beta subunit [Escherichia coli MS 124-1] gi|301324967|ref|ZP_07218522.1| ATP synthase F1, beta subunit [Escherichia coli MS 78-1] gi|301644408|ref|ZP_07244407.1| ATP synthase F1, beta subunit [Escherichia coli MS 146-1] gi|306815916|ref|ZP_07450054.1| F0F1 ATP synthase subunit beta [Escherichia coli NC101] gi|307140432|ref|ZP_07499788.1| F0F1 ATP synthase subunit beta [Escherichia coli H736] gi|307313196|ref|ZP_07592821.1| ATP synthase F1, beta subunit [Escherichia coli W] gi|309795711|ref|ZP_07690126.1| ATP synthase F1, beta subunit [Escherichia coli MS 145-7] gi|331644459|ref|ZP_08345588.1| ATP synthase F1, beta subunit [Escherichia coli H736] gi|331649558|ref|ZP_08350644.1| ATP synthase F1, beta subunit [Escherichia coli M605] gi|331655394|ref|ZP_08356393.1| ATP synthase F1, beta subunit [Escherichia coli M718] gi|331660076|ref|ZP_08361014.1| ATP synthase F1, beta subunit [Escherichia coli TA206] gi|331665386|ref|ZP_08366287.1| ATP synthase F1, beta subunit [Escherichia coli TA143] gi|331670582|ref|ZP_08371421.1| ATP synthase F1, beta subunit [Escherichia coli TA271] gi|331675219|ref|ZP_08375972.1| ATP synthase F1, beta subunit [Escherichia coli TA280] gi|331679836|ref|ZP_08380506.1| ATP synthase F1, beta subunit [Escherichia coli H591] gi|331685459|ref|ZP_08386045.1| ATP synthase F1, beta subunit [Escherichia coli H299] gi|332282473|ref|ZP_08394886.1| F1 sector of membrane-bound ATP synthase beta subunit [Shigella sp. D9] gi|81175145|sp|P0ABB6|ATPB_ECO57 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81175146|sp|P0ABB5|ATPB_ECOL6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81175147|sp|P0ABB4|ATPB_ECOLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81175148|sp|P0ABB7|ATPB_SHIFL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573529|sp|Q0TAX7|ATPB_ECOL5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573530|sp|Q1R4K2|ATPB_ECOUT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573744|sp|Q31UN2|ATPB_SHIBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573746|sp|Q3YVN6|ATPB_SHISS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|123146532|sp|Q0SYU4|ATPB_SHIF8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166201701|sp|A1AHR4|ATPB_ECOK1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166990367|sp|A7ZTU4|ATPB_ECO24 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081332|sp|B1IX06|ATPB_ECOLC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740192|sp|B7MGF2|ATPB_ECO45 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740193|sp|B5YXD6|ATPB_ECO5E RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740194|sp|B7NR34|ATPB_ECO7I RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740195|sp|B7M588|ATPB_ECO8A RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740196|sp|B1X9W0|ATPB_ECODH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740197|sp|B7NF48|ATPB_ECOLU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740198|sp|B6I3W9|ATPB_ECOSE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740199|sp|B1LL59|ATPB_ECOSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740201|sp|B7LK77|ATPB_ESCF3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740676|sp|B2TUP3|ATPB_SHIB3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808149|sp|B7UMJ7|ATPB_ECO27 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808150|sp|B7L882|ATPB_ECO55 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808151|sp|B7N2H1|ATPB_ECO81 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|259585443|sp|C4ZZ10|ATPB_ECOBW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|12518589|gb|AAG58935.1|AE005605_3 membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia coli O157:H7 str. EDL933] gi|26110906|gb|AAN83090.1|AE016769_205 ATP synthase beta chain [Escherichia coli CFT073] gi|41038|emb|CAA23527.1| unnamed protein product [Escherichia coli] gi|42277|emb|CAA23594.1| unnamed protein product [Escherichia coli] gi|146325|gb|AAA83875.1| H+ ATPase F1 beta subunit [Escherichia coli] gi|148139|gb|AAA24737.1| ATP synthase beta subunit [Escherichia coli] gi|290581|gb|AAA62084.1| ATP synthase F1 beta subunit [Escherichia coli] gi|899257|emb|CAA25782.1| unnamed protein product [Escherichia coli] gi|1790170|gb|AAC76755.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|13364149|dbj|BAB38097.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia coli O157:H7 str. Sakai] gi|24054294|gb|AAN45252.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella flexneri 2a str. 301] gi|30043224|gb|AAP18945.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella flexneri 2a str. 2457T] gi|73857719|gb|AAZ90426.1| membrane-bound ATP synthase, F1 sector, beta subunit [Shigella sonnei Ss046] gi|81247518|gb|ABB68226.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella boydii Sb227] gi|85676306|dbj|BAE77556.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli str. K12 substr. W3110] gi|91074831|gb|ABE09712.1| membrane-bound ATP synthase F1 sector beta-subunit [Escherichia coli UTI89] gi|110345665|gb|ABG71902.1| ATP synthase beta chain [Escherichia coli 536] gi|110617104|gb|ABF05771.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella flexneri 5 str. 8401] gi|115515129|gb|ABJ03204.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Escherichia coli APEC O1] gi|157078434|gb|ABV18142.1| ATP synthase F1, beta subunit [Escherichia coli E24377A] gi|169757159|gb|ACA79858.1| ATP synthase F1, beta subunit [Escherichia coli ATCC 8739] gi|169891068|gb|ACB04775.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli str. K-12 substr. DH10B] gi|170124121|gb|EDS93052.1| ATP synthase F1, beta subunit [Escherichia albertii TW07627] gi|170518907|gb|ACB17085.1| ATP synthase F1, beta subunit [Escherichia coli SMS-3-5] gi|187429913|gb|ACD09187.1| ATP synthase F1, beta subunit [Shigella boydii CDC 3083-94] gi|187771754|gb|EDU35598.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4196] gi|188016914|gb|EDU55036.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4113] gi|188488877|gb|EDU63980.1| ATP synthase F1, beta subunit [Escherichia coli 53638] gi|189002239|gb|EDU71225.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4076] gi|189359262|gb|EDU77681.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4401] gi|189364495|gb|EDU82914.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4486] gi|189369653|gb|EDU88069.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4501] gi|189373310|gb|EDU91726.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC869] gi|189378771|gb|EDU97187.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC508] gi|190904130|gb|EDV63841.1| ATP synthase F1, beta subunit [Escherichia coli B7A] gi|190909212|gb|EDV68798.1| ATP synthase F1, beta subunit [Escherichia coli F11] gi|192930489|gb|EDV83096.1| ATP synthase F1, beta subunit [Escherichia coli E22] gi|192957531|gb|EDV87977.1| ATP synthase F1, beta subunit [Escherichia coli E110019] gi|194413819|gb|EDX30097.1| ATP synthase F1, beta subunit [Escherichia coli B171] gi|194420499|gb|EDX36575.1| ATP synthase F1, beta subunit [Shigella dysenteriae 1012] gi|194425326|gb|EDX41310.1| ATP synthase F1, beta subunit [Escherichia coli 101-1] gi|208726812|gb|EDZ76413.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4206] gi|208733369|gb|EDZ82056.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4045] gi|208739021|gb|EDZ86703.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4042] gi|209162014|gb|ACI39447.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. EC4115] gi|209753888|gb|ACI75251.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli] gi|209753890|gb|ACI75252.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli] gi|209753892|gb|ACI75253.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli] gi|209753894|gb|ACI75254.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli] gi|209753896|gb|ACI75255.1| membrane-bound ATP synthase gamma-subunit AtpG [Escherichia coli] gi|209914472|dbj|BAG79546.1| ATP synthase beta subunit [Escherichia coli SE11] gi|215267142|emb|CAS11590.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli O127:H6 str. E2348/69] gi|217320873|gb|EEC29297.1| ATP synthase F1, beta subunit [Escherichia coli O157:H7 str. TW14588] gi|218354190|emb|CAV00818.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli 55989] gi|218358808|emb|CAQ91465.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia fergusonii ATCC 35469] gi|218363072|emb|CAR00710.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli IAI1] gi|218367576|emb|CAR05360.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli S88] gi|218372568|emb|CAR20442.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli IAI39] gi|218429584|emb|CAR10542.2| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli ED1a] gi|218434475|emb|CAR15402.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli UMN026] gi|222035445|emb|CAP78190.1| ATP synthase subunit beta [Escherichia coli LF82] gi|226838916|gb|EEH70943.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp. 1_1_43] gi|226902797|gb|EEH89056.1| membrane-bound ATP synthase beta-subunit AtpD [Escherichia sp. 3_2_53FAA] gi|227839232|gb|EEJ49698.1| H(+)-transporting two-sector ATPase [Escherichia coli 83972] gi|238861068|gb|ACR63066.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli BW2952] gi|242379270|emb|CAQ34077.1| ATP synthase, F1 complex, beta subunit, subunit of beta subunit complex, ATP synthase, F1 complex and ATP synthase [Escherichia coli BL21(DE3)] gi|253326677|gb|ACT31279.1| ATP synthase F1, beta subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975585|gb|ACT41256.1| F0F1 ATP synthase subunit beta [Escherichia coli B str. REL606] gi|253979741|gb|ACT45411.1| F0F1 ATP synthase subunit beta [Escherichia coli BL21(DE3)] gi|254595138|gb|ACT74499.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli O157:H7 str. TW14359] gi|257756502|dbj|BAI28004.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD [Escherichia coli O26:H11 str. 11368] gi|257761630|dbj|BAI33127.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD [Escherichia coli O103:H2 str. 12009] gi|257766822|dbj|BAI38317.1| F1 sector of membrane-bound ATP synthase, beta subunit AtpD [Escherichia coli O111:H- str. 11128] gi|260451411|gb|ACX41833.1| ATP synthase F1, beta subunit [Escherichia coli DH1] gi|281180790|dbj|BAI57120.1| ATP synthase beta subunit [Escherichia coli SE15] gi|281603130|gb|ADA76114.1| ATP synthase subunit beta [Shigella flexneri 2002017] gi|284923846|emb|CBG36945.1| ATP synthase beta subunit [Escherichia coli 042] gi|290765029|gb|ADD58990.1| ATP synthase subunit beta [Escherichia coli O55:H7 str. CB9615] gi|291321690|gb|EFE61126.1| ATP synthase F1 [Escherichia coli B088] gi|291425660|gb|EFE98696.1| ATP synthase subunit beta [Escherichia coli FVEC1412] gi|291431236|gb|EFF04229.1| ATP synthase F1 [Escherichia coli B185] gi|291468315|gb|EFF10810.1| ATP synthase F1 [Escherichia coli B354] gi|294493929|gb|ADE92685.1| ATP synthase F1, beta subunit [Escherichia coli IHE3034] gi|298276947|gb|EFI18465.1| ATP synthase subunit beta [Escherichia coli FVEC1302] gi|300300541|gb|EFJ56926.1| ATP synthase F1, beta subunit [Escherichia coli MS 185-1] gi|300306857|gb|EFJ61377.1| ATP synthase F1, beta subunit [Escherichia coli MS 200-1] gi|300314621|gb|EFJ64405.1| ATP synthase F1, beta subunit [Escherichia coli MS 175-1] gi|300360047|gb|EFJ75917.1| ATP synthase F1, beta subunit [Escherichia coli MS 198-1] gi|300398393|gb|EFJ81931.1| ATP synthase F1, beta subunit [Escherichia coli MS 69-1] gi|300404981|gb|EFJ88519.1| ATP synthase F1, beta subunit [Escherichia coli MS 84-1] gi|300408390|gb|EFJ91928.1| ATP synthase F1, beta subunit [Escherichia coli MS 45-1] gi|300418336|gb|EFK01647.1| ATP synthase F1, beta subunit [Escherichia coli MS 182-1] gi|300450049|gb|EFK13669.1| ATP synthase F1, beta subunit [Escherichia coli MS 116-1] gi|300454348|gb|EFK17841.1| ATP synthase F1, beta subunit [Escherichia coli MS 21-1] gi|300522959|gb|EFK44028.1| ATP synthase F1, beta subunit [Escherichia coli MS 119-7] gi|300531905|gb|EFK52967.1| ATP synthase F1, beta subunit [Escherichia coli MS 107-1] gi|300839127|gb|EFK66887.1| ATP synthase F1, beta subunit [Escherichia coli MS 124-1] gi|300848138|gb|EFK75898.1| ATP synthase F1, beta subunit [Escherichia coli MS 78-1] gi|301077247|gb|EFK92053.1| ATP synthase F1, beta subunit [Escherichia coli MS 146-1] gi|305850312|gb|EFM50769.1| F0F1 ATP synthase subunit beta [Escherichia coli NC101] gi|306906879|gb|EFN37388.1| ATP synthase F1, beta subunit [Escherichia coli W] gi|307555871|gb|ADN48646.1| ATP synthase beta chain [Escherichia coli ABU 83972] gi|307628806|gb|ADN73110.1| F0F1 ATP synthase subunit beta [Escherichia coli UM146] gi|308120590|gb|EFO57852.1| ATP synthase F1, beta subunit [Escherichia coli MS 145-7] gi|309704180|emb|CBJ03527.1| ATP synthase beta subunit [Escherichia coli ETEC H10407] gi|312948298|gb|ADR29125.1| F0F1 ATP synthase subunit beta [Escherichia coli O83:H1 str. NRG 857C] gi|313647652|gb|EFS12100.1| ATP synthase F1, beta subunit [Shigella flexneri 2a str. 2457T] gi|315063042|gb|ADT77369.1| F1 sector of membrane-bound ATP synthase, beta subunit [Escherichia coli W] gi|315138317|dbj|BAJ45476.1| ATP synthase subunit beta [Escherichia coli DH1] gi|315254575|gb|EFU34543.1| ATP synthase F1, beta subunit [Escherichia coli MS 85-1] gi|315285514|gb|EFU44956.1| ATP synthase F1, beta subunit [Escherichia coli MS 110-3] gi|315292848|gb|EFU52200.1| ATP synthase F1, beta subunit [Escherichia coli MS 153-1] gi|315296876|gb|EFU56165.1| ATP synthase F1, beta subunit [Escherichia coli MS 16-3] gi|320174622|gb|EFW49758.1| ATP synthase beta chain [Shigella dysenteriae CDC 74-1112] gi|320186285|gb|EFW61021.1| ATP synthase beta chain [Shigella flexneri CDC 796-83] gi|320191164|gb|EFW65814.1| ATP synthase beta chain [Escherichia coli O157:H7 str. EC1212] gi|320193723|gb|EFW68356.1| ATP synthase beta chain [Escherichia coli WV_060327] gi|320201236|gb|EFW75817.1| ATP synthase beta chain [Escherichia coli EC4100B] gi|320639460|gb|EFX09075.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str. G5101] gi|320644900|gb|EFX13936.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H- str. 493-89] gi|320650166|gb|EFX18662.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H- str. H 2687] gi|320655515|gb|EFX23450.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661138|gb|EFX28574.1| F0F1 ATP synthase subunit beta [Escherichia coli O55:H7 str. USDA 5905] gi|320666267|gb|EFX33273.1| F0F1 ATP synthase subunit beta [Escherichia coli O157:H7 str. LSU-61] gi|323155413|gb|EFZ41596.1| ATP synthase F1, beta subunit [Escherichia coli EPECa14] gi|323380896|gb|ADX53164.1| ATP synthase F1, beta subunit [Escherichia coli KO11] gi|323934917|gb|EGB31295.1| ATP synthase F1 [Escherichia coli E1520] gi|323939205|gb|EGB35418.1| ATP synthase F1 [Escherichia coli E482] gi|323944208|gb|EGB40288.1| ATP synthase F1 [Escherichia coli H120] gi|323949975|gb|EGB45859.1| ATP synthase F1 [Escherichia coli H252] gi|323954973|gb|EGB50751.1| ATP synthase F1 [Escherichia coli H263] gi|323959798|gb|EGB55448.1| ATP synthase F1 [Escherichia coli H489] gi|323965800|gb|EGB61251.1| ATP synthase F1 [Escherichia coli M863] gi|323971211|gb|EGB66457.1| ATP synthase F1 [Escherichia coli TA007] gi|323975200|gb|EGB70304.1| ATP synthase F1 [Escherichia coli TW10509] gi|324008032|gb|EGB77251.1| ATP synthase F1, beta subunit [Escherichia coli MS 57-2] gi|324012762|gb|EGB81981.1| ATP synthase F1, beta subunit [Escherichia coli MS 60-1] gi|324018470|gb|EGB87689.1| ATP synthase F1, beta subunit [Escherichia coli MS 117-3] gi|324111631|gb|EGC05612.1| ATP synthase F1 [Escherichia fergusonii B253] gi|324115912|gb|EGC09838.1| ATP synthase F1 [Escherichia coli E1167] gi|325499538|gb|EGC97397.1| F0F1 ATP synthase subunit beta [Escherichia fergusonii ECD227] gi|326340520|gb|EGD64319.1| ATP synthase beta chain [Escherichia coli O157:H7 str. 1044] gi|326341586|gb|EGD65375.1| ATP synthase beta chain [Escherichia coli O157:H7 str. 1125] gi|327250884|gb|EGE62586.1| ATP synthase F1, beta subunit [Escherichia coli STEC_7v] gi|330908045|gb|EGH36564.1| ATP synthase beta chain [Escherichia coli AA86] gi|331036753|gb|EGI08979.1| ATP synthase F1, beta subunit [Escherichia coli H736] gi|331042056|gb|EGI14200.1| ATP synthase F1, beta subunit [Escherichia coli M605] gi|331047409|gb|EGI19487.1| ATP synthase F1, beta subunit [Escherichia coli M718] gi|331053291|gb|EGI25324.1| ATP synthase F1, beta subunit [Escherichia coli TA206] gi|331057896|gb|EGI29882.1| ATP synthase F1, beta subunit [Escherichia coli TA143] gi|331062644|gb|EGI34564.1| ATP synthase F1, beta subunit [Escherichia coli TA271] gi|331067664|gb|EGI39066.1| ATP synthase F1, beta subunit [Escherichia coli TA280] gi|331073008|gb|EGI44333.1| ATP synthase F1, beta subunit [Escherichia coli H591] gi|331077830|gb|EGI49042.1| ATP synthase F1, beta subunit [Escherichia coli H299] gi|332084602|gb|EGI89796.1| ATP synthase F1, beta subunit [Shigella boydii 5216-82] gi|332104825|gb|EGJ08171.1| F1 sector of membrane-bound ATP synthase beta subunit [Shigella sp. D9] gi|332345722|gb|AEE59056.1| ATP synthase F1, beta subunit AtpD [Escherichia coli UMNK88] gi|332750741|gb|EGJ81149.1| ATP synthase F1, beta subunit [Shigella flexneri 4343-70] gi|332750905|gb|EGJ81311.1| ATP synthase F1, beta subunit [Shigella flexneri K-671] gi|332998044|gb|EGK17649.1| ATP synthase F1, beta subunit [Shigella flexneri K-272] Length = 460 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|325846719|ref|ZP_08169634.1| ATP synthase ab C terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481477|gb|EGC84518.1| ATP synthase ab C terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 457 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 113/383 (29%), Positives = 190/383 (49%), Gaps = 27/383 (7%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID-G 115 +GQV++I+ + V + G ++ SL D+V F I + GR N + +PID G Sbjct: 40 IGQVVKIDDETVTVEVFGNTQDFSLNDIVVEFEEKPLEIPLNESILGRTFNGIARPIDDG 99 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + S+E P A R+ +TGI IDI T L GQ++ +F+GSG+ + Sbjct: 100 GEIYSDKFYSVEGNPLNPVA--REYPRNFIQTGISSIDILTTLIRGQKLPIFSGSGMPHN 157 Query: 176 TLLSMFARSD--------CFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDES 227 + + R CF + + +G + E F + + +K VV+ + Sbjct: 158 EIAAQIVRQAKLKTNEDFCF---VFAAMGIKKDEAMFFEDAFTKAGVKDKVVMYENLADD 214 Query: 228 PILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 PI+ ++ P A+T AEY + K +VL+I+ IT +A ++RE+++ E+P +GYP Sbjct: 215 PIMERLITPKCALTAAEYLAFEKNKHVLVIITDITSYAEALREVSSIRQEVPSRKGYPGY 274 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 ++S+L L ER G E G++T + + + D+ PI D I +G IV++R L ++ Sbjct: 275 LYSDLASLYERAGMIEGVNGSVTLIPILTMPNDDITHPIPDLTGYITEGQIVIDRMLDQK 334 Query: 346 GRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVD 400 G YPP++ L S+SRL + D + L++ L + +E R+I I G D Sbjct: 335 GIYPPINVLPSLSRLMKDGIGEGYTRKDHEDLMNQLYESYSKVQEIRNISQIVGEDDLSD 394 Query: 401 LILDKAVHQVPIIYD--FLKQSP 421 +DKA + ++ FL Q P Sbjct: 395 --VDKAYLKFGKEFESRFLSQDP 415 >gi|312971976|ref|ZP_07786150.1| ATP synthase F1, beta subunit [Escherichia coli 1827-70] gi|310334353|gb|EFQ00558.1| ATP synthase F1, beta subunit [Escherichia coli 1827-70] Length = 441 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354 >gi|293391130|ref|ZP_06635464.1| F0F1 ATP synthase subunit beta [Aggregatibacter actinomycetemcomitans D7S-1] gi|290951664|gb|EFE01783.1| F0F1 ATP synthase subunit beta [Aggregatibacter actinomycetemcomitans D7S-1] Length = 457 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEQGPIGEEE-RWSIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRIP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYNVARGVQGILQRYKELKDIIAILG 376 >gi|27468618|ref|NP_765255.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis ATCC 12228] gi|57867649|ref|YP_189274.1| F0F1 ATP synthase subunit beta [Staphylococcus epidermidis RP62A] gi|251812184|ref|ZP_04826657.1| H(+)-transporting two-sector ATPase [Staphylococcus epidermidis BCM-HMP0060] gi|282876489|ref|ZP_06285355.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis SK135] gi|293366067|ref|ZP_06612755.1| ATP synthase F1 sector beta subunit [Staphylococcus epidermidis M23864:W2(grey)] gi|38604812|sp|Q8CNJ7|ATPB_STAES RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81170379|sp|Q5HMB9|ATPB_STAEQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|27316165|gb|AAO05299.1|AE016749_245 ATP synthase beta chain [Staphylococcus epidermidis ATCC 12228] gi|57638307|gb|AAW55095.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis RP62A] gi|251804281|gb|EES56938.1| H(+)-transporting two-sector ATPase [Staphylococcus epidermidis BCM-HMP0060] gi|281294741|gb|EFA87269.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis SK135] gi|291319790|gb|EFE60148.1| ATP synthase F1 sector beta subunit [Staphylococcus epidermidis M23864:W2(grey)] gi|329726160|gb|EGG62632.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU144] gi|329734118|gb|EGG70436.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU045] gi|329735661|gb|EGG71944.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU028] Length = 470 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID D+ + I + P + +TGI+V+D+ P Sbjct: 87 VTLGRVFNVLGETIDLDEKIDDSVRRDPIHRQAPGFDELSTKVEILETGIKVVDLLAPYI 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ + Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVI 205 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 KK+ +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 KKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALL 265 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI S KG++T++ +V V D++ DP + + LD Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--SSTNKGSVTSIQAVFVPADDYTDPAPATTFAHLD 323 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR + + E V+ + + ++ E +DI I Sbjct: 324 STTNLERKLTEMGIYPAVDPLASTSRALEPSVVGQEHYDVAREVQSTLQKYRELQDIIAI 383 Query: 393 GG 394 G Sbjct: 384 LG 385 >gi|301019812|ref|ZP_07183955.1| ATP synthase F1, beta subunit [Escherichia coli MS 196-1] gi|312967858|ref|ZP_07782070.1| ATP synthase F1, beta subunit [Escherichia coli 2362-75] gi|299882071|gb|EFI90282.1| ATP synthase F1, beta subunit [Escherichia coli MS 196-1] gi|312287419|gb|EFR15327.1| ATP synthase F1, beta subunit [Escherichia coli 2362-75] gi|320180086|gb|EFW55028.1| ATP synthase beta chain [Shigella boydii ATCC 9905] gi|323161016|gb|EFZ46935.1| ATP synthase F1, beta subunit [Escherichia coli E128010] gi|323167006|gb|EFZ52745.1| ATP synthase F1, beta subunit [Shigella sonnei 53G] gi|323177752|gb|EFZ63336.1| ATP synthase F1, beta subunit [Escherichia coli 1180] gi|323189535|gb|EFZ74815.1| ATP synthase F1, beta subunit [Escherichia coli RN587/1] gi|332084755|gb|EGI89941.1| ATP synthase F1, beta subunit [Shigella dysenteriae 155-74] gi|332089325|gb|EGI94429.1| ATP synthase F1, beta subunit [Shigella boydii 3594-74] gi|332751757|gb|EGJ82155.1| ATP synthase F1, beta subunit [Shigella flexneri 2747-71] gi|332995979|gb|EGK15606.1| ATP synthase F1, beta subunit [Shigella flexneri VA-6] gi|333013459|gb|EGK32830.1| ATP synthase F1, beta subunit [Shigella flexneri K-304] gi|333013706|gb|EGK33071.1| ATP synthase F1, beta subunit [Shigella flexneri K-227] Length = 435 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 354 >gi|308071147|ref|YP_003872752.1| ATP synthase subunit beta [Paenibacillus polymyxa E681] gi|305860426|gb|ADM72214.1| ATP synthase beta chain [Paenibacillus polymyxa E681] Length = 466 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 94/302 (31%), Positives = 158/302 (52%), Gaps = 11/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG PID + + + + + P+ + + + +TGI+VID+ P Sbjct: 88 ATLGRVFNVLGTPIDNGADMS--ETARNPIHRQAPSFDELTTQAEMLETGIKVIDLLAPY 145 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ + + + IS+ VGER RE + + + Sbjct: 146 AKGGKVGLFGGAGVGKTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMRDSGVI 205 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 NKTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGRDVLLFIDNIFRFTQAGSEVSALL 265 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLD 323 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R ++E G YP VDPLAS SR LA + + + ++ R+ E +DI I Sbjct: 324 ATTNLERKISEMGIYPAVDPLASSSRILAPDVVGEEHYNVAQGVKQILARYNELQDIIAI 383 Query: 393 GG 394 G Sbjct: 384 LG 385 >gi|110598291|ref|ZP_01386566.1| ATP synthase F1, beta subunit [Chlorobium ferrooxidans DSM 13031] gi|110340099|gb|EAT58599.1| ATP synthase F1, beta subunit [Chlorobium ferrooxidans DSM 13031] Length = 462 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/297 (31%), Positives = 158/297 (53%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N +G+PIDG + + I P + F+TGI+VID+ P G + Sbjct: 88 RMMNVVGEPIDGRGPVHTAK-TYSIHRSAPKFDEISTKAEMFETGIKVIDLLEPYSRGGK 146 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVV 219 G+F G+G+GK+ L+ + + S+ VGER RE + + + + K+ + Sbjct: 147 TGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLWHEMMESGVIDKTAL 206 Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R+ LT ++IAEYF +G +VLL +D+I RF + E++ G +P Sbjct: 207 VFGQMNEPPGARQRVALTGLSIAEYFRDEEGRDVLLFIDNIFRFTQAGSEVSALLGRMPS 266 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ +L +RI +KG++T+V ++ V D+ DP + + LD VL Sbjct: 267 AVGYQPTLATEMGQLQDRI--VSTKKGSVTSVQAIYVPADDLTDPAPATAFAHLDATTVL 324 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +R +AE G YP VDPL S SR+ D D+ ++ L+ R+++ +DI I G Sbjct: 325 SRQIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQLLQRYKDLQDIIAILG 381 >gi|85060392|ref|YP_456094.1| F0F1 ATP synthase subunit beta [Sodalis glossinidius str. 'morsitans'] gi|118573748|sp|Q2NQ86|ATPB_SODGM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|84780912|dbj|BAE75689.1| ATP synthase beta subunit [Sodalis glossinidius str. 'morsitans'] Length = 460 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 156/304 (51%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+P+D KGD+ E I P + +TGI+VID+ Sbjct: 83 ATLGRIMNVLGEPVDM-----KGDIGEEERWSIHRPAPSYEELASSQDLLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|257094250|ref|YP_003167891.1| F0F1 ATP synthase subunit beta [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046774|gb|ACV35962.1| ATP synthase F1, beta subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 449 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 157/305 (51%), Gaps = 9/305 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G +I + GR+++ G+P+DG +L + I++ P + + TGI+ Sbjct: 68 GPLQIPVTPDCLGRLLDIFGQPLDGGPALEATEFR-PIVAAPAPLAEELGMGEILPTGIK 126 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIE 207 VID+ P G + G+F G+G+GK+ L+ F + +S+ VGER RE E Sbjct: 127 VIDLLCPFVRGGKTGLFGGAGVGKTVLIMEFMNAIVRLHQGVSVFAGVGERIREGHELWH 186 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 D + +S++V DESP +R L+A+T AEY VL ++D+ RF + Sbjct: 187 DMQDAGVMPRSLMVFGQMDESPGVRFRIGLSALTYAEYLRDHVAKEVLFLMDNAFRFVQA 246 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P GY ++ SE+ L ERI S GNITAV +V V D+ DP Sbjct: 247 GSELSGLLGRMPATVGYQPTLLSEVAELQERI--SSTRSGNITAVEAVYVPADDMTDPAV 304 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 ++ + LD ++L+R+ A +G YP VDPLAS S + D+ D ++ ++ + R+ Sbjct: 305 GAILAHLDTTVILSRNQAAKGIYPAVDPLASGSPMMDRVTLGDRHYQVAQAVREHLARYR 364 Query: 385 ETRDI 389 E DI Sbjct: 365 ELEDI 369 >gi|206577341|ref|YP_002241287.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae 342] gi|288937926|ref|YP_003441985.1| ATP synthase F1 subunit beta [Klebsiella variicola At-22] gi|290511666|ref|ZP_06551034.1| ATP synthase F1, beta subunit [Klebsiella sp. 1_1_55] gi|226740210|sp|B5XZM4|ATPB_KLEP3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|206566399|gb|ACI08175.1| ATP synthase F1, beta subunit [Klebsiella pneumoniae 342] gi|288892635|gb|ADC60953.1| ATP synthase F1, beta subunit [Klebsiella variicola At-22] gi|289775456|gb|EFD83456.1| ATP synthase F1, beta subunit [Klebsiella sp. 1_1_55] Length = 460 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+P+D KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGQPVDM-----KGDIGEEERWAIHRAAPSYEELSSSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|313665019|ref|YP_004046890.1| ATP synthase F1, beta subunit [Mycoplasma leachii PG50] gi|312949426|gb|ADR24022.1| ATP synthase F1, beta subunit [Mycoplasma leachii PG50] Length = 476 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 22/305 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG PID K DL ++ I P + +TGI+VID+ P Sbjct: 98 LGRMFNVLGDPIDE-----KPDLDVKRLPIHRDAPIYEELVTTTEILETGIKVIDLMIPF 152 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYLG 211 G ++G+F G+G+GK+ L+ + + V + + VGER RE EFIE + Sbjct: 153 TKGGKVGLFGGAGVGKTILIQELINNIAKAHNGVSVFAGVGERTREGNDLYHEFIEAGV- 211 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L K+ +V +E P R LT +TIAEYF K + +VLL +D+I RF + E++ Sbjct: 212 --LNKTCLVFGQMNEPPGARMRVALTGLTIAEYFRDKKNMDVLLFIDNIFRFTQAGSEVS 269 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 270 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFT 327 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDI 389 LD IVL+RS+A G YP VDPLAS SR+ D E ++ + + +++E + I Sbjct: 328 HLDARIVLDRSIASLGIYPAVDPLASSSRVLDPEIVGQEHYDIALKVQITLQKYQELQSI 387 Query: 390 RLIGG 394 I G Sbjct: 388 IAILG 392 >gi|170040305|ref|XP_001847944.1| ATP synthase beta subunit [Culex quinquefasciatus] gi|167863871|gb|EDS27254.1| ATP synthase beta subunit [Culex quinquefasciatus] Length = 511 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 105/322 (32%), Positives = 167/322 (51%), Gaps = 24/322 (7%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + + +LS I ++ P + ++ TGI+V+ Sbjct: 108 IRIPVGAETLGRIINVIGEPIDERGPI-ETNLSAPIHAEAPEFVEMSVEQEILVTGIKVV 166 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 167 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNE 225 Query: 205 FIED---YLGDNLKKSV-------VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVL 253 IE L D K V +V +E P R LT +T+AEYF +G +VL Sbjct: 226 MIEGGVISLKDKTSKVVSIEALVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVL 285 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 L +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 286 LFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAI 343 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKL 372 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + Sbjct: 344 YVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNI 403 Query: 373 VSSLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 404 ARGVQKILQDYKSLQDIIAILG 425 >gi|119471627|ref|ZP_01614012.1| F0F1 ATP synthase subunit beta [Alteromonadales bacterium TW-7] gi|119445406|gb|EAW26693.1| F0F1 ATP synthase subunit beta [Alteromonadales bacterium TW-7] Length = 461 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/332 (30%), Positives = 166/332 (50%), Gaps = 9/332 (2%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G V + G ++ GR++N LG+PID +G+ D M Sbjct: 52 VVRTIALGTTDGLRRGAAVSNTGEAIQVPVGKATLGRIMNVLGEPIDEAGPIGEED-RMS 110 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I P + + +TGI+VID+ P G ++G+F G+G+GK+ + R+ Sbjct: 111 IHRAAPSYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAI 170 Query: 188 DKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE +F + N L K +V +E P R LT +T+AE Sbjct: 171 EHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKVSLVYGQMNEPPGNRLRVALTGLTMAE 230 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F +G +VL +D+I R+ + E++ G +P A GY ++ E+ L ERI + + Sbjct: 231 KFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERIAST--K 288 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 289 TGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSSSRQLDP 348 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + ++ R++E +DI I G Sbjct: 349 LVIGQEHYDTARGVQTVLQRYKELKDIIAILG 380 >gi|82779076|ref|YP_405425.1| F0F1 ATP synthase subunit beta [Shigella dysenteriae Sd197] gi|118573745|sp|Q329S1|ATPB_SHIDS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81243224|gb|ABB63934.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Shigella dysenteriae Sd197] Length = 460 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|157163214|ref|YP_001460532.1| F0F1 ATP synthase subunit beta [Escherichia coli HS] gi|166990368|sp|A8A6J5|ATPB_ECOHS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157068894|gb|ABV08149.1| ATP synthase F1, beta subunit [Escherichia coli HS] Length = 460 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|323173357|gb|EFZ58986.1| ATP synthase F1, beta subunit [Escherichia coli LT-68] gi|332997375|gb|EGK16991.1| ATP synthase F1, beta subunit [Shigella flexneri K-218] Length = 466 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|238750324|ref|ZP_04611826.1| ATP synthase subunit beta [Yersinia rohdei ATCC 43380] gi|238765107|ref|ZP_04626041.1| ATP synthase subunit beta [Yersinia kristensenii ATCC 33638] gi|238696659|gb|EEP89442.1| ATP synthase subunit beta [Yersinia kristensenii ATCC 33638] gi|238711557|gb|EEQ03773.1| ATP synthase subunit beta [Yersinia rohdei ATCC 43380] Length = 435 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I + P + +TGI+V+D+ P G Sbjct: 60 LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 118 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|296127615|ref|YP_003634867.1| ATP synthase F1, beta subunit [Brachyspira murdochii DSM 12563] gi|296019431|gb|ADG72668.1| ATP synthase F1, beta subunit [Brachyspira murdochii DSM 12563] Length = 470 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 103/322 (31%), Positives = 164/322 (50%), Gaps = 12/322 (3%) Query: 81 ISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 IS GD +F + P GR+ N LG+ +D + + + + PP Sbjct: 70 ISRGDDIFDTENHIMVPVGTETIGRIFNVLGQTVDKGEPVEAKEYRS--IHAAPPKFETL 127 Query: 140 RVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLV 195 + + F+TGI+VID+ P G + G+F G+G+GK+ L+ S+ + + V Sbjct: 128 EPKLEIFETGIKVIDLLAPYIKGGKTGLFGGAGVGKTVLIMELIHNIASEHGGYSVFAGV 187 Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVL 253 GER RE + + + K+ +V +E P R LTA+T+AEYF S G +VL Sbjct: 188 GERTREGNDLWSEMKESGVINKTCLVYGQMNEPPGARLRVALTALTMAEYFRDSAGLDVL 247 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 L +D+I RF + E++ G +P A GY ++ +E+ L ERI + G+IT++ +V Sbjct: 248 LFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTRNGSITSIQAV 305 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KL 372 V D+ DP + + LD VL+R ++E+G YP VDPLAS SR+ D E Sbjct: 306 YVPADDLTDPAPATAFTHLDATTVLSREVSEKGIYPAVDPLASTSRILDPNILGQEHYDT 365 Query: 373 VSSLTHLIHRFEETRDIRLIGG 394 + H++ R+ + +DI I G Sbjct: 366 ARRVQHILQRYRDLQDIIAILG 387 >gi|186477773|ref|YP_001859243.1| F0F1 ATP synthase subunit beta [Burkholderia phymatum STM815] gi|184194232|gb|ACC72197.1| ATP synthase F1, beta subunit [Burkholderia phymatum STM815] Length = 464 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + ++ I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPIASDNMR-SIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382 >gi|3913122|sp|O50292|ATPB_AQUPY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|2687826|emb|CAA75780.1| F1F0-ATPase beta subunit [Aquifex pyrophilus] Length = 478 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 168/312 (53%), Gaps = 13/312 (4%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGI 149 G +I GR+ N G+PID + + M + PP + Q + + +TGI Sbjct: 87 GPIKIPVGKEVLGRIFNVAGQPIDEQGPVEAKEYWP--MFRNPPELVEQSTKVEILETGI 144 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE- 204 +VID+ P+ G ++G+F G+G+GK+ L+ AR V++ VGER RE + Sbjct: 145 KVIDLLQPIIKGGKVGLFGGAGVGKTVLMQELIHNIARFHEGYSVVVG-VGERTREGNDL 203 Query: 205 FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 ++E L +V+V +E P +R T +T+AEYF +G +VL+ +D+I RF Sbjct: 204 WLEMKESGVLPYTVMVYGQMNEPPGVRFRVAHTGLTMAEYFRDVEGQDVLIFIDNIFRFV 263 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++T G LP A GY ++ +++ + ERI + +KG+ITA+ +V V D+ DP Sbjct: 264 QAGSEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TSTKKGSITAIQAVYVPADDITDP 321 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 S+ + LD VL R LAE G YP +DPL S S+ LA + + ++ + ++ R Sbjct: 322 APWSIFAHLDATTVLTRRLAELGIYPAIDPLESTSKYLAPEYVGEEHYEVAMEVKRILQR 381 Query: 383 FEETRDIRLIGG 394 ++E ++I I G Sbjct: 382 YKELQEIIAILG 393 >gi|121603172|ref|YP_980501.1| F0F1 ATP synthase subunit beta [Polaromonas naphthalenivorans CJ2] gi|190358212|sp|A1VIV2|ATPB1_POLNA RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|120592141|gb|ABM35580.1| ATP synthase F1 subcomplex beta subunit [Polaromonas naphthalenivorans CJ2] Length = 474 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 108/340 (31%), Positives = 171/340 (50%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 IV +G + + G++V++ G P GR+++ LG PID + + L+ Sbjct: 58 IVRTIALGTSDGLRRGNIVYNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQ-TLTAP 116 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 117 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 176 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAP 235 + V VGER RE +F + D L+ S V V +E P R Sbjct: 177 AHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLDKLEDSKVAMVYGQMNEPPGNRLRVA 235 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT +TIAE F +G +VL +D+I R+ + E++ G +P A GY ++ E+ RL E Sbjct: 236 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 295 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL Sbjct: 296 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 353 Query: 356 SVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 S SR L+ D ++ + R++E RDI I G Sbjct: 354 STSRQLSPAVVGEDHYNTARAVQGTLQRYKELRDIIAILG 393 >gi|46909253|gb|AAT06144.1| ATP synthase beta subunit [Metridium senile] Length = 427 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/314 (30%), Positives = 161/314 (51%), Gaps = 15/314 (4%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID + S I + P ++ ++ +TGI+V+ Sbjct: 55 IRIPVGPALLGRIINVIGEPIDERGPINTDKYS-SIHQEAPEFVDMSVEQEILQTGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + + Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKGHGGFSVFAGVGERTREGNDLYHEM 173 Query: 210 -------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 174 ITSKVISLTDDTSKVALVYGQMNEPPGARARGCLTGLTVAEYFRDQEGQDVLLFIDNIFL 233 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 234 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLT 291 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP + + LD VL+R +AE G YP VDPL S+SR+ D +E V+ + ++ Sbjct: 292 DPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRILDPNVVGEEHYTVARGVQKVL 351 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 352 QDYKSLQDIIAILG 365 >gi|260913589|ref|ZP_05920066.1| ATP synthase F1 sector subunit beta [Pasteurella dagmatis ATCC 43325] gi|260632365|gb|EEX50539.1| ATP synthase F1 sector subunit beta [Pasteurella dagmatis ATCC 43325] Length = 457 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 157/299 (52%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCH 160 GR++N LG+PID +G + + + PP+ Q + +TGI+VID+ P Sbjct: 82 LGRIMNVLGEPIDEQGPIGAEENWS--IHRAPPSYEEQSNSTELLETGIKVIDLVCPFAK 139 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 140 GGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDK 199 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G + Sbjct: 200 VSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRM 259 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD + Sbjct: 260 PSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTV 317 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 318 VLSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKDIIAILG 376 >gi|157964051|ref|YP_001504085.1| F0F1 ATP synthase subunit beta [Shewanella pealeana ATCC 700345] gi|189081346|sp|A8HAG3|ATPB_SHEPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157849051|gb|ABV89550.1| ATP synthase F1, beta subunit [Shewanella pealeana ATCC 700345] Length = 458 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 162/304 (53%), Gaps = 14/304 (4%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 + GR++N LG+P+D +G+ D + I + P ++ + +TGI+VID+ P Sbjct: 80 SATLGRIMNVLGEPVDEAGPIGEEDRYV-IHREAPSYEDQSNTTELLETGIKVIDLVCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF---IEDYLG 211 G ++G+F G+G+GK+ L++ A++ V VGER RE +F +ED Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMED--S 195 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 L K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ Sbjct: 196 GVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTEVSA 255 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 313 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R++A G YP VDPL S SR D E + + + ++ R++E +DI Sbjct: 314 LDATVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVANGVQTVLQRYKELKDII 373 Query: 391 LIGG 394 I G Sbjct: 374 AILG 377 >gi|134300981|ref|YP_001114477.1| F0F1 ATP synthase subunit beta [Desulfotomaculum reducens MI-1] gi|190358666|sp|A4J999|ATPB_DESRM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134053681|gb|ABO51652.1| ATP synthase F1 subcomplex beta subunit [Desulfotomaculum reducens MI-1] Length = 472 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 162/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+ DG + + K + I P +++ + +TGI+VID+ P G Sbjct: 93 GRLLNVLGEEADGLEPI-KAEKYYPIHRPAPALVDQSTKAEMLETGIKVIDLMIPFLKGG 151 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ ++ + IS+ VGER RE + + L+K++ Sbjct: 152 KIGLFGGAGVGKTVIVMELINNIAKQHGGISVFAGVGERTREGNDLYHEMKEAGVLEKTI 211 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G + LL +D+I RF + E++ G +P Sbjct: 212 MVFGQMNEPPGARLRVGLTGLTMAEFFRDEEGADTLLFIDNIFRFTQAGSEVSALLGRMP 271 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ +L ERI + KG++T+V ++ V D+ DP + + LD +V Sbjct: 272 SAVGYQPTLATEMGQLQERI--TSTRKGSVTSVQAIYVPADDLTDPAPANAFAHLDATVV 329 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R+++E G YP VDPL S SR+ D E + + ++ R++E +DI I G Sbjct: 330 LSRAISELGIYPAVDPLDSTSRILDPQVVGKEHYECARGVQSVLQRYKELQDIIAILG 387 >gi|238753980|ref|ZP_04615339.1| ATP synthase subunit beta [Yersinia ruckeri ATCC 29473] gi|238707732|gb|EEQ00091.1| ATP synthase subunit beta [Yersinia ruckeri ATCC 29473] Length = 435 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG PID +G+ + I + P + +TGI+V+D+ P Sbjct: 58 ATLGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLD 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 295 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|225712758|gb|ACO12225.1| ATP synthase subunit beta, mitochondrial precursor [Lepeophtheirus salmonis] Length = 505 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 159/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G PID + I ++ PP ++ TGI+V+D+ P G Sbjct: 115 LGRIINVIGDPIDERGPVNSKS-KASIHAEAPPFSEMSVQQEILVTGIKVVDLLAPYAKG 173 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 174 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISL 232 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 233 KDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSEV 292 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 293 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATTF 350 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D A+ ++ ++ ++ ++ +D Sbjct: 351 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNVIGAEHYQIARNIQKILQDYKSLQD 410 Query: 389 IRLIGG 394 I I G Sbjct: 411 IIAILG 416 >gi|1168571|sp|P42468|ATPB_BURCE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|587502|emb|CAA54204.1| ATPase beta-subunit [Burkholderia cepacia] Length = 463 Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 155/297 (52%), Gaps = 9/297 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV 218 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N+ V Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V P ++ LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVLTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPS 266 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +VL Sbjct: 267 AVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVL 324 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 SRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 381 >gi|238759558|ref|ZP_04620720.1| ATP synthase subunit beta [Yersinia aldovae ATCC 35236] gi|238702217|gb|EEP94772.1| ATP synthase subunit beta [Yersinia aldovae ATCC 35236] Length = 435 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I + P + +TGI+V+D+ P G Sbjct: 60 LGRIMNVLGDPIDMKGPIGEEE-RWAIHREAPSYEELASSQDLLETGIKVMDLICPFAKG 118 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 119 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVLDKV 178 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 179 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 238 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 239 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 296 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 297 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|256827613|ref|YP_003151572.1| ATP synthase, F1 beta subunit [Cryptobacterium curtum DSM 15641] gi|256583756|gb|ACU94890.1| ATP synthase, F1 beta subunit [Cryptobacterium curtum DSM 15641] Length = 479 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 154/297 (51%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+P+DG + M I P + F+TGI+V+D+ P G Sbjct: 100 GRIWNVVGEPVDGK-PMPDIARRMPIHHPAPEYDTLTTTTEIFETGIKVVDLIEPFIRGG 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ ++ + + + + VGER RE + ++E + K+ Sbjct: 159 KTGLFGGAGVGKTVIIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMSEAGVINKTC 218 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R L +T AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 219 LVYGQMNEPPGARLRVGLAGLTEAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 278 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD VL Sbjct: 279 AVGYQPTLATEMGDLQERI--TSTNVGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 336 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 NRS+AE G YP VDPL S SR + A E V+ + ++ +++ +DI I G Sbjct: 337 NRSIAELGIYPAVDPLESTSRALEPAIVGQEHYDVAVGVQQILQNYKDLQDIIAILG 393 >gi|254520882|ref|ZP_05132937.1| ATP synthase F1, beta subunit [Stenotrophomonas sp. SKA14] gi|219718473|gb|EED36998.1| ATP synthase F1, beta subunit [Stenotrophomonas sp. SKA14] Length = 468 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D S EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGPVAASD-SWEIHRAAPSYEDQSPATELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+RS+A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|194367283|ref|YP_002029893.1| F0F1 ATP synthase subunit beta [Stenotrophomonas maltophilia R551-3] gi|226740679|sp|B4SJR9|ATPB_STRM5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|194350087|gb|ACF53210.1| ATP synthase F1, beta subunit [Stenotrophomonas maltophilia R551-3] Length = 468 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D S EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGPVAASD-SWEIHRDAPSYEDQSPATELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+RS+A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|4519350|dbj|BAA75590.1| ATP synthase beta-subunit [Chlorogonium kasakii] Length = 376 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 164/311 (52%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +LG K + S+ I + P ++ F+TGI+V+DI P Sbjct: 31 LGRILNVLGEPVD---NLGPVKANSSLPIHRQAPAFVDLDTRLSIFETGIKVVDILAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W EK + S+ + R+ Sbjct: 264 ATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYATAQSVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|311696570|gb|ADP99443.1| ATP synthase subunit beta [marine bacterium HP15] Length = 464 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID +G+ + I K P ++ +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPIDEAGEIGEEE-RWAIHRKAPGYADQAASADLLETGIKVIDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYYEMKESNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G + Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRM 260 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + S LD + Sbjct: 261 PSAVGYQPTLAEEMGQLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFSHLDATV 318 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +A +G YP +DPL S SR D E ++ + + R++E +DI I G Sbjct: 319 VLSRDIASKGIYPAIDPLDSTSRQLDPLIIGQEHYEVARGVQTNLQRYKELKDIIAILG 377 >gi|154246023|ref|YP_001416981.1| F0F1 ATP synthase subunit beta [Xanthobacter autotrophicus Py2] gi|226740692|sp|A7IH31|ATPB_XANP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|154160108|gb|ABS67324.1| ATP synthase F1, beta subunit [Xanthobacter autotrophicus Py2] Length = 478 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 159/316 (50%), Gaps = 26/316 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 A GR++N +G+P+D LG + + + I P + + TGI+V+D+ Sbjct: 83 AGTLGRIMNVIGEPVD---ELGPIEAEATRGIHQPAPSYAEQATEAEILVTGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ L+ + A++ V VGER RE + + + Sbjct: 140 PYAKGGKVGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIES 198 Query: 213 NLKKS-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSI 259 N+ K +V +E P R LT +T+AE+F +G +VL +D+I Sbjct: 199 NVNKDPHENGGSAAGSKCALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNI 258 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ Sbjct: 259 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADD 316 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 DP + + LD VL+RS+AE+G YP VDPL S SR+ A DE + Sbjct: 317 LTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAILGDEHYNTARQVQQ 376 Query: 379 LIHRFEETRDIRLIGG 394 + R++ +DI I G Sbjct: 377 TLQRYKALQDIIAILG 392 >gi|83319730|ref|YP_424079.1| F0F1 ATP synthase subunit beta [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|118573698|sp|Q2ST34|ATPB_MYCCT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|83283616|gb|ABC01548.1| ATP synthase F1, beta subunit [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 476 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 106/305 (34%), Positives = 160/305 (52%), Gaps = 22/305 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG PID K DL ++ I P + +TGI+VID+ P Sbjct: 98 LGRMFNVLGDPIDE-----KPDLDVKRLPIHRDAPIYEELVTTTEILETGIKVIDLMIPF 152 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYLG 211 G ++G+F G+G+GK+ L+ + + V + + VGER RE EFIE + Sbjct: 153 TKGGKVGLFGGAGVGKTILIQELINNIAKAHNGVSVFAGVGERTREGNDLYHEFIEAGV- 211 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L K+ +V +E P R LT +TIAEYF K + +VLL +D+I RF + E++ Sbjct: 212 --LNKTCLVFGQMNEPPGARMRVALTGLTIAEYFRDKKNMDVLLFIDNIFRFTQAGSEVS 269 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 270 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFT 327 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDI 389 LD IVL+RS+A G YP VDPLAS SR+ D E ++ + + +++E + I Sbjct: 328 HLDARIVLDRSIASLGIYPAVDPLASSSRVLDPEIVGQEHYDIALKVQITLQKYQELQSI 387 Query: 390 RLIGG 394 I G Sbjct: 388 IAILG 392 >gi|240851266|ref|YP_002972669.1| ATP synthase beta chain [Bartonella grahamii as4aup] gi|240268389|gb|ACS51977.1| ATP synthase beta chain [Bartonella grahamii as4aup] Length = 542 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 22/313 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + I + PP + + + + TGI+V+D+ P Sbjct: 147 ATLGRIMNVIGEPVDNVGPI-PATKTRSIHQEAPPYVEQSTISEILVTGIKVVDLLAPYS 205 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 206 KGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVN 264 Query: 212 DNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 N K K +V +E P R L+ +TIAE F +G +VL +D+I RF Sbjct: 265 VNPKENNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRF 324 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ D Sbjct: 325 TQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAIYVPADDLTD 382 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381 P + + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ Sbjct: 383 PAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHYTVACQVQTILQ 442 Query: 382 RFEETRDIRLIGG 394 R+ +DI I G Sbjct: 443 RYRALQDIIAILG 455 >gi|149369647|ref|ZP_01889499.1| F0F1 ATP synthase subunit beta [unidentified eubacterium SCB49] gi|149357074|gb|EDM45629.1| F0F1 ATP synthase subunit beta [unidentified eubacterium SCB49] Length = 501 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 107/330 (32%), Positives = 162/330 (49%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G PIDG ++L K G + I + P + TGI+VID+ P G Sbjct: 89 GRLFNVIGDPIDGMEALAKAGKDGLPIHREAPKFEELSTSSEVLFTGIKVIDLIEPYAKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 149 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 208 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 209 DDFMHSMEEGGWDLSKVDKMAMRDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 268 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 269 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 326 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ A Sbjct: 327 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTAAI 386 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + L+ R++E +DI I G Sbjct: 387 LGDEHYDCAQRVKMLLQRYKELQDIIAILG 416 >gi|32490757|ref|NP_871011.1| F0F1 ATP synthase subunit beta [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|81844477|sp|Q8D3J3|ATPB_WIGBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|25165963|dbj|BAC24154.1| atpD [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 462 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 159/301 (52%), Gaps = 14/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N LG PID + LS E I +K P ++ +TGI++ID+ P Sbjct: 85 LGRIMNVLGDPIDRKGKI----LSSEYRPIHNKSPSYNEISSSDELLETGIKIIDLICPF 140 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ + R+ + + S VGER RE +F + + N + Sbjct: 141 AKGGKIGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFSGVGERTREGNDFYNEMISSNVI 200 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G++VL +D+I R+ + E++ G Sbjct: 201 DKVSLVYGQMNEPPGNRLRVALTGLTLAEKFRDEGNDVLFFVDNIYRYTLAGTEVSALLG 260 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V ++ V D+ DP + LD Sbjct: 261 RIPSAVGYQPTLSEEMGILQERI--TSTKSGSITSVQAIYVPADDLTDPSPATTFVHLDA 318 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP +DPL S SR D ++ LV+ + ++ R+++ +DI I Sbjct: 319 TVVLSRQIASLGIYPAIDPLDSTSRQLDPLIVGEDHYLVARKIQSILQRYKDLKDIIAIL 378 Query: 394 G 394 G Sbjct: 379 G 379 >gi|222152000|ref|YP_002561160.1| ATP synthase beta subunit [Macrococcus caseolyticus JCSC5402] gi|254808156|sp|B9E8E6|ATPB_MACCJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|222121129|dbj|BAH18464.1| ATP synthase beta subunit [Macrococcus caseolyticus JCSC5402] Length = 471 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 107/333 (32%), Positives = 173/333 (51%), Gaps = 21/333 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTP 157 GRV N LG+ ID + L G + + + + P +VE +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGEKIDLEPEL-DGTVRRDPIHRQAPKFEELSTKVEI-LETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ Sbjct: 146 YIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFHE-MSDSG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 +KK+ +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 205 VIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ +L ERI + G++T++ +V V D++ DP + + Sbjct: 265 LLGRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAVFVPADDYTDPAPATAFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L R L E G YP VDPLAS SR A +E ++ + + ++ E +DI Sbjct: 323 LDATTNLERKLTEMGIYPAVDPLASTSRALTPAVVGEEHYEVARQVQATLQKYRELQDII 382 Query: 391 LIGGYRPGVDLILD---KAVHQVPIIYDFLKQS 420 I G+D + D K V + I FL Q+ Sbjct: 383 AI----LGMDELSDEDKKTVSRARRIQFFLSQN 411 >gi|296317258|ref|NP_001171729.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Saccoglossus kowalevskii] Length = 523 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/273 (35%), Positives = 150/273 (54%), Gaps = 18/273 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID + D I + P + + ++ +TGI+V+D+ P C G Sbjct: 138 GRIINVIGEPIDERGPI-PTDRRSGIHQEAPEFVEMKVEQEILETGIKVVDLLAPYCKGG 196 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE D Sbjct: 197 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIDLK 255 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 256 GDGSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 314 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 315 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 372 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 373 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 405 >gi|190575942|ref|YP_001973787.1| F0F1 ATP synthase subunit beta [Stenotrophomonas maltophilia K279a] gi|226740680|sp|B2FHY8|ATPB_STRMK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190013864|emb|CAQ47502.1| putative ATP synthase beta chain [Stenotrophomonas maltophilia K279a] Length = 468 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D S EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGPVAASD-SWEIHRAAPSYEDQSPATELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+RS+A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRSIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|157694077|ref|YP_001488539.1| F0F1 ATP synthase subunit beta [Bacillus pumilus SAFR-032] gi|166990366|sp|A8FIB2|ATPB_BACP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157682835|gb|ABV63979.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Bacillus pumilus SAFR-032] Length = 473 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/302 (32%), Positives = 161/302 (53%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG ID D+ LG + + + + P+ ++ E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGDNIDLDEPLGV-EAQRDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMKDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 +K+ +V +E P R LT +T+AE+F + G +VL +D+I RF + E++ Sbjct: 209 EKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDELGQDVLFFIDNIYRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR LA + + + + + R++E +DI I Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAIAREVQQTLQRYKELQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|289804513|ref|ZP_06535142.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 426 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 46 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 104 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 105 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 164 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 165 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 224 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 225 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 282 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 283 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 342 >gi|296446169|ref|ZP_06888117.1| ATP synthase F1, beta subunit [Methylosinus trichosporium OB3b] gi|296256363|gb|EFH03442.1| ATP synthase F1, beta subunit [Methylosinus trichosporium OB3b] Length = 478 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+IN +G+P+D + + + + P+ Q E +TGI+V+D+ P Sbjct: 87 MLGRIINVIGEPVDEAGPIQT--TARRAIHQPAPSYAEQATEAQILETGIKVVDLLAPYA 144 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL--GDN 213 G +IG+F G+G+GK+ L++ A++ V VGER RE + + + G N Sbjct: 145 KGGKIGLFGGAGVGKTVIIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVN 203 Query: 214 LK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264 K K+ +V +E P R LT +T+AE F KG +VL +D+I RF Sbjct: 204 KKPENGSAAGSKAALVYGQMNEPPGARARVALTGLTVAEDFRDKGQDVLFFVDNIFRFTQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 264 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383 + + LD VLNR++AE+G YP VDPL S SR+ A +E V+ + + R+ Sbjct: 322 PAASFAHLDATTVLNRAIAEKGIYPAVDPLDSTSRMLSPAIVGEEHYDVARKVQSTLQRY 381 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 382 KSLQDIIAILG 392 >gi|256370203|ref|YP_003107714.1| ATP synthase subunit B [Brucella microti CCM 4915] gi|256000366|gb|ACU48765.1| ATP synthase subunit B [Brucella microti CCM 4915] Length = 521 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K + I P + + + TGI+V+D+ P G Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R L+ +T+AE F +G +VL +D+I RF + E+ Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ R++ +D Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEHYAVARQVQSILQRYKALQD 429 Query: 389 IRLIGG 394 I I G Sbjct: 430 IIAILG 435 >gi|238025753|ref|YP_002909984.1| F0F1 ATP synthase subunit beta [Burkholderia glumae BGR1] gi|237874947|gb|ACR27280.1| ATP synthase F1, beta subunit [Burkholderia glumae BGR1] Length = 464 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 106/330 (32%), Positives = 168/330 (50%), Gaps = 12/330 (3%) Query: 72 ICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS 130 IC +G + + G LV + G+ + GR+++ LG+PID + + + I Sbjct: 58 IC-LGASDGLRRGVLVKNTGKPISVPVGKPTLGRIMDVLGRPIDEAGPI-ESEHQRSIHQ 115 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDC 186 K P + +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 116 KAPAFDELSPSTELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHG 175 Query: 187 FDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 V VGER RE +F + N L K +V +E P R LT +T+AE+F Sbjct: 176 GYSVFAG-VGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEHF 234 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ E+ +L ERI + + G Sbjct: 235 RDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTG 292 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + LD +VL+R +A G YP VDPL S SR D Sbjct: 293 SITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNV 352 Query: 366 SADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +E ++ + + R++E RDI I G Sbjct: 353 IGEEHYTITRGVQQTLQRYKELRDIIAILG 382 >gi|190571537|ref|YP_001975895.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018939|ref|ZP_03334747.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|226740690|sp|B3CN17|ATPB_WOLPP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190357809|emb|CAQ55265.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995890|gb|EEB56530.1| ATP synthase F1, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 478 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 106/336 (31%), Positives = 174/336 (51%), Gaps = 28/336 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG +E + + PP+ Q++ E+ TGI+VID+ P G Sbjct: 87 GRIFNVVGELIDECGPL-KGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKG 145 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYNEMITSNVID 203 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 204 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGS 263 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 264 EISALLGRIPSAVGYQPTLATDMGAMQERIASTTA--GSITSVQAIYVPADDLTDPAPAT 321 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 S LD VL+R +AE G YP VDPL S S+ L+ + + + S + ++ ++ Sbjct: 322 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVASEVKRILQTYKSL 381 Query: 387 RDIRLIGGYRPGVD---LILDKAVHQVPIIYDFLKQ 419 +DI I G D +I+D+A I FL Q Sbjct: 382 QDIIAILGMDELSDEDKIIVDRARK----IQKFLSQ 413 >gi|170724356|ref|YP_001752044.1| F0F1 ATP synthase subunit beta [Pseudomonas putida W619] gi|226740663|sp|B1JFU1|ATPB_PSEPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|169762359|gb|ACA75675.1| ATP synthase F1, beta subunit [Pseudomonas putida W619] Length = 458 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 158/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ + I P ++ +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPIDEAGPIGE-EERWGIHRDAPSFADQAGGNDLLETGIKVIDLVCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ G Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ DP + + LD Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D +E + + +++ R++E +DI I G Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETARGVQYVLQRYKELKDIIAILG 377 >gi|262281306|ref|ZP_06059087.1| membrane-bound ATP synthase [Acinetobacter calcoaceticus RUH2202] gi|262257132|gb|EEY75869.1| membrane-bound ATP synthase [Acinetobacter calcoaceticus RUH2202] Length = 464 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + + I + P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD +VL+R +A G YP +DPL S SR D E ++ S+ +++ R++E + Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNILQRYKELK 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|261346707|ref|ZP_05974351.1| ATP synthase F1, beta subunit [Providencia rustigianii DSM 4541] gi|282565107|gb|EFB70642.1| ATP synthase F1, beta subunit [Providencia rustigianii DSM 4541] Length = 460 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P + +TGI+V+D+ Sbjct: 83 ATLGRIMNVLGDPIDM-----KGDIGEEERWSIHRSAPSYEELANSTELLETGIKVMDLI 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|209515776|ref|ZP_03264639.1| ATP synthase F1, beta subunit [Burkholderia sp. H160] gi|209503803|gb|EEA03796.1| ATP synthase F1, beta subunit [Burkholderia sp. H160] Length = 464 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPISS-ETTRAIHQKAPAFDQLSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382 >gi|167724890|ref|ZP_02408126.1| F0F1 ATP synthase subunit beta [Burkholderia pseudomallei DM98] Length = 364 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 12/270 (4%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFA 182 I PP ++ F TGI+VID+ PL G + +F G+G+GK+ L+ +M Sbjct: 11 IHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVE 70 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241 R + + +GER RE E + D G L ++V+V +E P R PLTA+ I Sbjct: 71 RYRGIS--VFAGIGERSREGDEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAI 128 Query: 242 AEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 AEYF + NVLL++D++ RF + E++ G LP GY ++ SE+ L ERI + Sbjct: 129 AEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERI--A 186 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 E +TA+ +V V D+ DP ++ + +D +VL+R++A EG YP +DP+AS S L Sbjct: 187 SVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSIL 246 Query: 361 ADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 D + V+ + +I + E +D+ Sbjct: 247 LDPLVVGEAHVEVAIEVRRVIEHYRELQDV 276 >gi|62290664|ref|YP_222457.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 1 str. 9-941] gi|82700579|ref|YP_415153.1| F0F1 ATP synthase subunit beta [Brucella melitensis biovar Abortus 2308] gi|189024876|ref|YP_001935644.1| F0F1 ATP synthase subunit beta [Brucella abortus S19] gi|237816165|ref|ZP_04595160.1| ATP synthase F1, beta subunit [Brucella abortus str. 2308 A] gi|254694444|ref|ZP_05156272.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|254698103|ref|ZP_05159931.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|254730987|ref|ZP_05189565.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 4 str. 292] gi|260547100|ref|ZP_05822838.1| ATP synthase subunit beta [Brucella abortus NCTC 8038] gi|260758710|ref|ZP_05871058.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 4 str. 292] gi|260762544|ref|ZP_05874881.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|261214758|ref|ZP_05929039.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 3 str. Tulya] gi|81309373|sp|Q57B88|ATPB_BRUAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573512|sp|Q2YLE6|ATPB_BRUA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|62196796|gb|AAX75096.1| AtpD, ATP synthase F1, beta subunit [Brucella abortus bv. 1 str. 9-941] gi|82616680|emb|CAJ11763.1| Antifreeze protein, type I:H+-transporting two-sector ATPase, alpha/beta subunit, central region:H+-transporting two-sector A [Brucella melitensis biovar Abortus 2308] gi|189020448|gb|ACD73170.1| ATP synthase subunit B [Brucella abortus S19] gi|237788627|gb|EEP62840.1| ATP synthase F1, beta subunit [Brucella abortus str. 2308 A] gi|260095465|gb|EEW79343.1| ATP synthase subunit beta [Brucella abortus NCTC 8038] gi|260669028|gb|EEX55968.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 4 str. 292] gi|260672970|gb|EEX59791.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|260916365|gb|EEX83226.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 3 str. Tulya] Length = 521 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K + I P + + + TGI+V+D+ P G Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R L+ +T+AE F +G +VL +D+I RF + E+ Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ R++ +D Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMIDPKVVGEEHYAVARQVQSILQRYKALQD 429 Query: 389 IRLIGG 394 I I G Sbjct: 430 IIAILG 435 >gi|254719787|ref|ZP_05181598.1| F0F1 ATP synthase subunit beta [Brucella sp. 83/13] gi|265984806|ref|ZP_06097541.1| ATP synthase subunit beta [Brucella sp. 83/13] gi|306839484|ref|ZP_07472292.1| ATP synthase F1, beta subunit [Brucella sp. NF 2653] gi|306841512|ref|ZP_07474211.1| ATP synthase F1, beta subunit [Brucella sp. BO2] gi|264663398|gb|EEZ33659.1| ATP synthase subunit beta [Brucella sp. 83/13] gi|306288423|gb|EFM59780.1| ATP synthase F1, beta subunit [Brucella sp. BO2] gi|306405429|gb|EFM61700.1| ATP synthase F1, beta subunit [Brucella sp. NF 2653] Length = 521 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K + I P + + + TGI+V+D+ P G Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQSAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R L+ +T+AE F +G +VL +D+I RF + E+ Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ R++ +D Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEHYAVARQVQSILQRYKALQD 429 Query: 389 IRLIGG 394 I I G Sbjct: 430 IIAILG 435 >gi|156846713|ref|XP_001646243.1| hypothetical protein Kpol_1013p57 [Vanderwaltozyma polyspora DSM 70294] gi|156116917|gb|EDO18385.1| hypothetical protein Kpol_1013p57 [Vanderwaltozyma polyspora DSM 70294] Length = 505 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 108/308 (35%), Positives = 166/308 (53%), Gaps = 22/308 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+IN +G+PID + K L I ++ PP+ Q E + +TGI+V+D+ P Sbjct: 119 LGRIINVIGEPIDERGPI-KSKLRKPIHAE-PPSFVEQSTEAEVLETGIKVVDLLAPYAR 176 Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----D 208 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 177 GGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMRETGVIN 235 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 236 LEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGS 293 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 294 EVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPAT 351 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEET 386 + LD VL+R ++E G YP VDPL S SRL D A E V++ + + ++ Sbjct: 352 TFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATRVQETLQAYKSL 411 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 412 QDIIAILG 419 >gi|332995860|gb|AEF05915.1| F0F1 ATP synthase subunit beta [Alteromonas sp. SN2] Length = 461 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ D M I P ++ + +TGI+VID+ P Sbjct: 84 ATLGRIMDVLGNPIDEAGPIGEED-RMSIHRAAPSYEDQSSSVELLETGIKVIDLVCPFA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N L Sbjct: 143 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNDSNVLD 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 203 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 321 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKDIIAILG 380 >gi|289743389|gb|ADD20442.1| F0F1-type ATP synthase beta subunit [Glossina morsitans morsitans] Length = 507 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 161/314 (51%), Gaps = 15/314 (4%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D I ++ P + ++ TGI+V+ Sbjct: 111 IRIPVGAETLGRIINVIGEPIDERGPV-PTDKRAPIHAEAPEFVEMSVEQEILVTGIKVV 169 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREF 205 D+ P G +IG+F G+G+GK+ L+ + + + VGER RE E Sbjct: 170 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYNEM 229 Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I R Sbjct: 230 IESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 289 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 290 FTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLT 347 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ Sbjct: 348 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGHEHYNVARGVQKIL 407 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 408 QDYKSLQDIIAILG 421 >gi|254689952|ref|ZP_05153206.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 6 str. 870] gi|256258207|ref|ZP_05463743.1| F0F1 ATP synthase subunit beta [Brucella abortus bv. 9 str. C68] gi|260755487|ref|ZP_05867835.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 6 str. 870] gi|260884508|ref|ZP_05896122.1| ATP synthase subunit beta [Brucella abortus bv. 9 str. C68] gi|297249056|ref|ZP_06932764.1| ATP synthase F1, beta subunit [Brucella abortus bv. 5 str. B3196] gi|260675595|gb|EEX62416.1| ATP synthase F1 sector subunit beta [Brucella abortus bv. 6 str. 870] gi|260874036|gb|EEX81105.1| ATP synthase subunit beta [Brucella abortus bv. 9 str. C68] gi|297174189|gb|EFH33546.1| ATP synthase F1, beta subunit [Brucella abortus bv. 5 str. B3196] Length = 521 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K + I P + + + TGI+V+D+ P G Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R L+ +T+AE F +G +VL +D+I RF + E+ Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ R++ +D Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMIDPKVVGEEHYAVARQVQSILQRYKALQD 429 Query: 389 IRLIGG 394 I I G Sbjct: 430 IIAILG 435 >gi|258690456|gb|ACV87990.1| ATP synthase beta subunit [Haliclona (Haliclona) sp. KJP-2009] Length = 427 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 161/314 (51%), Gaps = 15/314 (4%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID +G + I ++ P + ++ TGI+V+ Sbjct: 55 IRIPVGPKTLGRIINVIGEPIDERGPVGSEHYA-NIHAEAPNFEDMSTDQEILVTGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L++ + + + VGER RE + + Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLITELINNVAKAHGGYSVFAGVGERTREGNDLYYEM 173 Query: 210 -------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 L DN K +V +E P R LT +T+AEYF +G +VL +D+I R Sbjct: 174 ITSGVISLKDNSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLFFIDNIFR 233 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 234 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLT 291 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ Sbjct: 292 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGQEHYGVARGVQKIL 351 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 352 QDYKSLQDIIAILG 365 >gi|17986535|ref|NP_539169.1| F0F1 ATP synthase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|23502652|ref|NP_698779.1| F0F1 ATP synthase subunit beta [Brucella suis 1330] gi|148559326|ref|YP_001259638.1| F0F1 ATP synthase subunit beta [Brucella ovis ATCC 25840] gi|161619719|ref|YP_001593606.1| F0F1 ATP synthase subunit beta [Brucella canis ATCC 23365] gi|163845375|ref|YP_001623030.1| F0F1 ATP synthase subunit beta [Brucella suis ATCC 23445] gi|225628353|ref|ZP_03786387.1| ATP synthase F1, beta subunit [Brucella ceti str. Cudo] gi|225853243|ref|YP_002733476.1| F0F1 ATP synthase subunit beta [Brucella melitensis ATCC 23457] gi|254700443|ref|ZP_05162271.1| F0F1 ATP synthase subunit beta [Brucella suis bv. 5 str. 513] gi|254703564|ref|ZP_05165392.1| F0F1 ATP synthase subunit beta [Brucella suis bv. 3 str. 686] gi|254708349|ref|ZP_05170177.1| F0F1 ATP synthase subunit beta [Brucella pinnipedialis M163/99/10] gi|254714641|ref|ZP_05176452.1| F0F1 ATP synthase subunit beta [Brucella ceti M644/93/1] gi|254717539|ref|ZP_05179350.1| F0F1 ATP synthase subunit beta [Brucella ceti M13/05/1] gi|256045395|ref|ZP_05448289.1| F0F1 ATP synthase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|256114363|ref|ZP_05455096.1| F0F1 ATP synthase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|256160496|ref|ZP_05458185.1| F0F1 ATP synthase subunit beta [Brucella ceti M490/95/1] gi|256255702|ref|ZP_05461238.1| F0F1 ATP synthase subunit beta [Brucella ceti B1/94] gi|256263269|ref|ZP_05465801.1| ATP synthase subunit beta [Brucella melitensis bv. 2 str. 63/9] gi|260167999|ref|ZP_05754810.1| F0F1 ATP synthase subunit beta [Brucella sp. F5/99] gi|260565713|ref|ZP_05836196.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|260568870|ref|ZP_05839338.1| ATP synthase subunit beta [Brucella suis bv. 4 str. 40] gi|261219373|ref|ZP_05933654.1| ATP synthase subunit beta [Brucella ceti M13/05/1] gi|261222913|ref|ZP_05937194.1| ATP synthase subunit beta [Brucella ceti B1/94] gi|261315848|ref|ZP_05955045.1| ATP synthase subunit beta [Brucella pinnipedialis M163/99/10] gi|261322435|ref|ZP_05961632.1| ATP synthase subunit beta [Brucella ceti M644/93/1] gi|261750944|ref|ZP_05994653.1| ATP synthase subunit beta [Brucella suis bv. 5 str. 513] gi|261754198|ref|ZP_05997907.1| ATP synthase subunit beta [Brucella suis bv. 3 str. 686] gi|261757444|ref|ZP_06001153.1| ATP synthase subunit beta [Brucella sp. F5/99] gi|265991824|ref|ZP_06104381.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|265995663|ref|ZP_06108220.1| ATP synthase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|265998872|ref|ZP_06111429.1| ATP synthase subunit beta [Brucella ceti M490/95/1] gi|294851037|ref|ZP_06791713.1| ATP synthase F1 [Brucella sp. NVSL 07-0026] gi|306844779|ref|ZP_07477364.1| ATP synthase F1, beta subunit [Brucella sp. BO1] gi|81752067|sp|Q8FYR5|ATPB_BRUSU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81852461|sp|Q8YJ35|ATPB_BRUME RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358262|sp|A9M837|ATPB_BRUC2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358263|sp|A5VSE1|ATPB_BRUO2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358264|sp|A9WWS2|ATPB_BRUSI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|17982141|gb|AAL51433.1| ATP synthase beta chain [Brucella melitensis bv. 1 str. 16M] gi|23348660|gb|AAN30694.1| ATP synthase F1, beta subunit [Brucella suis 1330] gi|148370583|gb|ABQ60562.1| ATP synthase F1, beta subunit [Brucella ovis ATCC 25840] gi|161336530|gb|ABX62835.1| ATP synthase F1, beta subunit [Brucella canis ATCC 23365] gi|163676098|gb|ABY40208.1| ATP synthase F1, beta subunit [Brucella suis ATCC 23445] gi|225616199|gb|EEH13247.1| ATP synthase F1, beta subunit [Brucella ceti str. Cudo] gi|225641608|gb|ACO01522.1| ATP synthase F1, beta subunit [Brucella melitensis ATCC 23457] gi|260151086|gb|EEW86181.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|260154254|gb|EEW89336.1| ATP synthase subunit beta [Brucella suis bv. 4 str. 40] gi|260921497|gb|EEX88150.1| ATP synthase subunit beta [Brucella ceti B1/94] gi|260924462|gb|EEX91030.1| ATP synthase subunit beta [Brucella ceti M13/05/1] gi|261295125|gb|EEX98621.1| ATP synthase subunit beta [Brucella ceti M644/93/1] gi|261304874|gb|EEY08371.1| ATP synthase subunit beta [Brucella pinnipedialis M163/99/10] gi|261737428|gb|EEY25424.1| ATP synthase subunit beta [Brucella sp. F5/99] gi|261740697|gb|EEY28623.1| ATP synthase subunit beta [Brucella suis bv. 5 str. 513] gi|261743951|gb|EEY31877.1| ATP synthase subunit beta [Brucella suis bv. 3 str. 686] gi|262553561|gb|EEZ09330.1| ATP synthase subunit beta [Brucella ceti M490/95/1] gi|262766947|gb|EEZ12565.1| ATP synthase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|263002780|gb|EEZ15183.1| ATP synthase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|263093233|gb|EEZ17330.1| ATP synthase subunit beta [Brucella melitensis bv. 2 str. 63/9] gi|294821680|gb|EFG38676.1| ATP synthase F1 [Brucella sp. NVSL 07-0026] gi|306274951|gb|EFM56721.1| ATP synthase F1, beta subunit [Brucella sp. BO1] gi|326409802|gb|ADZ66867.1| F0F1 ATP synthase subunit beta [Brucella melitensis M28] gi|326539519|gb|ADZ87734.1| ATP synthase F1, beta subunit [Brucella melitensis M5-90] Length = 521 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K + I P + + + TGI+V+D+ P G Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R L+ +T+AE F +G +VL +D+I RF + E+ Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ R++ +D Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEHYAVARQVQSILQRYKALQD 429 Query: 389 IRLIGG 394 I I G Sbjct: 430 IIAILG 435 >gi|70733499|ref|YP_263274.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens Pf-5] gi|118573723|sp|Q4K3A9|ATPB_PSEF5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|68347798|gb|AAY95404.1| ATP synthase F1, beta subunit [Pseudomonas fluorescens Pf-5] Length = 458 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 157/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ + I P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPIDEAGPIGE-EERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ G Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ DP + + LD Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D +E + + +++ R++E +DI I G Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETARGVQYVLQRYKELKDIIAILG 377 >gi|328852582|gb|EGG01727.1| hypothetical protein MELLADRAFT_45062 [Melampsora larici-populina 98AG31] Length = 542 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 165/312 (52%), Gaps = 18/312 (5%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GR++N +G+PID + M I ++ P +++ + + TGI+V+D+ Sbjct: 147 PVGPECLGRIMNVIGEPIDERGPINT-KTQMPIHAEPPSFIDQSTIPEVLVTGIKVVDLL 205 Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+ G+G+GK+ L++ A++ V VGER RE E IE Sbjct: 206 APYARGGKIGLLGGAGVGKTVFIQELINNVAKAHGGYSVFCG-VGERTREGNDLYHEMIE 264 Query: 208 D---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 L ++ K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF Sbjct: 265 TGVIQLKNDKSKAALVFGQMNEPPGARARVALTGLTLAEYFRDEEGQDVLLFIDNIFRFT 324 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ + ERI + KG+IT+V +V V D+ DP Sbjct: 325 QAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTRKGSITSVQAVYVPADDLTDP 382 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R ++E G YP VDPL S SRL D +E L +++ L+ Sbjct: 383 APATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDPRIVGEEHYNLATAIQKLLQD 442 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 443 YKGLQDIIAILG 454 >gi|295678133|ref|YP_003606657.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1002] gi|295437976|gb|ADG17146.1| ATP synthase F1, beta subunit [Burkholderia sp. CCGE1002] Length = 464 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPISS-ETTRAIHQKAPAFDQLSPSTELLETGIKVIDLICPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPHVIGEEHYSITRGVQQTLQRYKELRDIIAILG 382 >gi|258690458|gb|ACV87991.1| ATP synthase beta subunit [Damiria sp. KJP-2009] Length = 427 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 161/307 (52%), Gaps = 21/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID + + D+ I + P ++ ++ TGI+V+D+ P G Sbjct: 65 GRIINVIGEPIDERGPV-ETDMVASIHADAPEFVDMNVNQEILVTGIKVVDLLAPYAKGG 123 Query: 163 RIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREVREFIEDY------- 209 +IG+F G+G+GK+ ++ A C + + VGER RE + + Sbjct: 124 KIGLFGGAGVGKTVVIMELINNVAKAHGGC---SVFAGVGERTREGNDLYHEMIQSGVIS 180 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R L+ +T+AEYF K G +VLL +D+I RF + E Sbjct: 181 LKDDTSKVALVYGQMNEPPGARARVALSGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSE 240 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 241 VSALLGRIPSAVGYQPTLATDMGTMQERI--TTTQKGSITSVQAVFVPADDLTDPAPATT 298 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD VL+R+++E G YP VDPL S SR+ D +E V+ + ++ + + Sbjct: 299 FAHLDAITVLSRAISELGIYPAVDPLDSTSRIMDPYIVGEEHYNVARGVQKILQDYRSLQ 358 Query: 388 DIRLIGG 394 DI I G Sbjct: 359 DIIAILG 365 >gi|315618560|gb|EFU99146.1| ATP synthase F1, beta subunit [Escherichia coli 3431] Length = 429 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 52 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 110 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 111 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 170 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 171 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 230 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 231 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 288 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 289 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 348 >gi|300115592|ref|YP_003762167.1| ATP synthase F1 subunit beta [Nitrosococcus watsonii C-113] gi|299541529|gb|ADJ29846.1| ATP synthase F1, beta subunit [Nitrosococcus watsonii C-113] Length = 458 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+P+D +G+ + I K P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGEPVDEAGPIGEEE-RWSIHRKAPAYEELSPATELLETGIKVIDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMKDSQVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VLL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR D E V+ ++ + R++E +DI I G Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYQVARAVQGNLQRYKELKDIIAILG 377 >gi|219870177|gb|ACL50294.1| atpD beta synthase chain [Pseudomonas chlororaphis subsp. aurantiaca] Length = 297 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + I P + +TGI+VID+ P G Sbjct: 1 LGRIMDVLGNPIDEAGPIGE-EERWGIHRPAPTFAEQAGGNDLLETGIKVIDLVCPFAKG 59 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 60 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 119 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ G +P Sbjct: 120 ALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMP 179 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + ++G+IT++ +V V D+ DP + + LD +V Sbjct: 180 SAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 237 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + +++ R++E +DI I G Sbjct: 238 LSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETARGVQYVLQRYKELKDIIAILG 295 >gi|212637833|ref|YP_002314358.1| F0F1 ATP synthase subunit beta [Shewanella piezotolerans WP3] gi|226740674|sp|B8CVU5|ATPB_SHEPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|212559317|gb|ACJ31771.1| ATP synthase F1, beta subunit [Shewanella piezotolerans WP3] Length = 458 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 14/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+P+D +G+ D + I + P ++ + +TGI+VID+ P G Sbjct: 83 LGRIMNVLGQPVDEAGPIGEEDRYV-IHREAPSYEDQSNTTELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF---IEDYLGDNL 214 ++G+F G+G+GK+ L++ A++ V VGER RE +F +ED L Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMED--SGVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTEVSALLG 258 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 259 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 316 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R++A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 317 TVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVANGVQTVLQRYKELKDIIAIL 376 Query: 394 G 394 G Sbjct: 377 G 377 >gi|50288781|ref|XP_446820.1| hypothetical protein [Candida glabrata CBS 138] gi|49526129|emb|CAG59751.1| unnamed protein product [Candida glabrata] Length = 507 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + L I + P + + +TGI+V+D+ P G Sbjct: 121 LGRIINVIGEPIDERGPI-NSKLRKPIHADPPSFAEQSTAAEVLETGIKVVDLLAPYARG 179 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 180 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 238 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 239 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 296 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 297 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 354 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+RS++E G YP VDPL S SRL D A +E + + + + ++ + Sbjct: 355 FAHLDATTVLSRSISELGIYPAVDPLDSKSRLLDAAVVGEEHYNVATKVQETLQTYKSLQ 414 Query: 388 DIRLIGG 394 DI I G Sbjct: 415 DIIAILG 421 >gi|91178118|gb|ABE27294.1| mitochondrial F-ATPase beta subunit [Kluyveromyces marxianus] Length = 337 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 103/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K + I + P + + + +TGI+V+D+ P G Sbjct: 19 LGRIINVIGEPIDERGPI-KSKMRKPIHADPPSFVEQSTAAEVLETGIKVVDLLAPYARG 77 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 78 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 136 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 137 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 194 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 195 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 252 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D A E + + + + ++ + Sbjct: 253 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATQVQQTLQAYKSLQ 312 Query: 388 DIRLIGG 394 DI I G Sbjct: 313 DIIAILG 319 >gi|302536956|ref|ZP_07289298.1| ATP synthase F1, beta subunit [Streptomyces sp. C] gi|302445851|gb|EFL17667.1| ATP synthase F1, beta subunit [Streptomyces sp. C] Length = 480 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/328 (30%), Positives = 178/328 (54%), Gaps = 17/328 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ ++ + I K P + + F+TG++VID+ TP G Sbjct: 101 GKVFNTLGEVLNYPEANAEVTERWPIHRKAPSFDELESKTEMFETGVKVIDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + IE+ +GD+ + K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEE-MGDSGVIDKT 219 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L +T+AEYF + +VL +D+I R+ + E++T G + Sbjct: 220 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRYTQAGSEVSTLLGRM 279 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD Sbjct: 280 PSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATT 337 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R ++E+G YP VDPL S SR+ D + +AD + ++ ++++ +DI I Sbjct: 338 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYAAAMRVKGILQKYKDLQDIIAI--- 394 Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 395 -LGIDELGEEDKLVVHRARRVERFLSQN 421 >gi|183597137|ref|ZP_02958630.1| hypothetical protein PROSTU_00376 [Providencia stuartii ATCC 25827] gi|188023447|gb|EDU61487.1| hypothetical protein PROSTU_00376 [Providencia stuartii ATCC 25827] Length = 460 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG PID KGD+ E I P + +TGI+V+D+ Sbjct: 83 ATLGRIMNVLGDPIDM-----KGDIGEEERWSIHRAAPSYEELSSSTELLETGIKVMDLI 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVLDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|331221317|ref|XP_003323333.1| ATP synthase subunit beta [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309302323|gb|EFP78914.1| ATP synthase subunit beta [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 542 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 166/312 (53%), Gaps = 18/312 (5%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GR++N +G+PID + K M I ++ P +++ + + TGI+V+D+ Sbjct: 147 PVGPECLGRIMNVIGEPIDERGPI-KTKTMMPIHAEPPEFIDQSTIPEVLVTGIKVVDLL 205 Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+ G+G+GK+ L++ A++ V VGER RE E IE Sbjct: 206 APYARGGKIGLLGGAGVGKTVFIQELINNVAKAHGGYSVFCG-VGERTREGNDLYHEMIE 264 Query: 208 D---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 L ++ K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF Sbjct: 265 TGVIQLNNDKSKAALVFGQMNEPPGARARVALTGLTLAEYFRDEEGQDVLLFIDNIFRFT 324 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ + ERI + KG+IT+V +V V D+ DP Sbjct: 325 QAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTRKGSITSVQAVYVPADDLTDP 382 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHR 382 + + LD VL+R ++E G YP VDPL S SRL D + + L +++ L+ Sbjct: 383 APATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDPRIVGPEHYNLATAVQKLLQD 442 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 443 YKGLQDIIAILG 454 >gi|297626245|ref|YP_003688008.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1 sector subunit beta) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922010|emb|CBL56572.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1 sector subunit beta) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 483 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 161/299 (53%), Gaps = 10/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 G V NA G ++ D + K D I + PPA + E + +TGI+V+D+ TP G Sbjct: 103 GHVWNATGDLLNADPATVKIDERWSI-HREPPAFDALEPESQMLETGIKVLDLLTPYVQG 161 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + I + N LK + Sbjct: 162 GKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLIHEMEEANVLKDT 221 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 222 ALVFGQMDEPPGTRLRVALSALTMAEYFRDVENQDVLLFIDNIFRFTQAGSEVSTLLGRM 281 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 282 PSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATT 339 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL+S SR LA + + + + + ++ R +E +DI I G Sbjct: 340 ELSRDIASRGLYPAVDPLSSTSRILAPEYVGKEHYDVATEVKQILQRNKELQDIIAILG 398 >gi|312142787|ref|YP_003994233.1| ATP synthase F1, beta subunit [Halanaerobium sp. 'sapolanicus'] gi|311903438|gb|ADQ13879.1| ATP synthase F1, beta subunit [Halanaerobium sp. 'sapolanicus'] Length = 470 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + + M I P ++ + F+TGI+VID+ P G Sbjct: 90 LGRIFNVLGETIDNRGGVDTEE-RMPIHRSAPKFEEQETSTELFETGIKVIDLLAPYTRG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 ++G+F G+G+GK+ L+ + + + S VGER RE + ++E D L K Sbjct: 149 GKVGLFGGAGVGKTVLIQELINNIATEHGGYSVFSGVGERTREGNDLWLEFQEADVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF + G +VLL +D+I RF + E++ G + Sbjct: 209 AMVFGQMNEPPGARMRVGLTGLTMAEYFRDEAGQDVLLFIDNIFRFIQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ ++ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 269 PSAVGYQPTLAYDVGTLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S S + D +E V+ + ++ +++ +DI I G Sbjct: 327 VLSRDIVEKGIYPAVDPLDSTSNILDPRILGEEHYNVARQVQEILQEYKDLQDIIAILG 385 >gi|183602788|ref|ZP_02964151.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp. lactis HN019] gi|219683116|ref|YP_002469499.1| ATP synthase subunit beta [Bifidobacterium animalis subsp. lactis AD011] gi|241191445|ref|YP_002968839.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196851|ref|YP_002970406.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp. lactis DSM 10140] gi|254808132|sp|B8DWS2|ATPB_BIFA0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|183218026|gb|EDT88674.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp. lactis HN019] gi|219620766|gb|ACL28923.1| ATP synthase F1, beta subunit [Bifidobacterium animalis subsp. lactis AD011] gi|240249837|gb|ACS46777.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251405|gb|ACS48344.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177571|gb|ADC84817.1| ATP synthase B chain [Bifidobacterium animalis subsp. lactis BB-12] gi|295794438|gb|ADG33973.1| F0F1 ATP synthase subunit beta [Bifidobacterium animalis subsp. lactis V9] Length = 495 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/269 (35%), Positives = 149/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 142 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 201 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 202 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 261 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 262 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGH--S 319 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A G YP VDPLAS SR+ D + Sbjct: 320 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLASTSRILDPRYV 379 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 380 GQAHYDCANRVKAILQRNKELQDIIALIG 408 >gi|50083469|ref|YP_044979.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. ADP1] gi|299771942|ref|YP_003733968.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. DR1] gi|81393960|sp|Q6FFK0|ATPB_ACIAD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|49529445|emb|CAG67157.1| membrane-bound ATP synthase , F1 sector, beta-subunit [Acinetobacter sp. ADP1] gi|298702030|gb|ADI92595.1| F0F1 ATP synthase subunit beta [Acinetobacter sp. DR1] Length = 464 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + + I + P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD +VL+R +A G YP +DPL S SR D E ++ S+ +++ R++E + Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELK 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|91178110|gb|ABE27290.1| mitochondrial F-ATPase beta subunit [Candida glabrata] Length = 337 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + L I + P + + +TGI+V+D+ P G Sbjct: 19 LGRIINVIGEPIDERGPI-NSKLRKPIHADPPSFAEQSTAAEVLETGIKVVDLLAPYARG 77 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 78 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 136 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 137 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 194 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 195 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 252 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+RS++E G YP VDPL S SRL D A +E + + + + ++ + Sbjct: 253 FAHLDATTVLSRSISELGIYPAVDPLDSKSRLLDAAVVGEEHYNVATKVQETLQTYKSLQ 312 Query: 388 DIRLIGG 394 DI I G Sbjct: 313 DIIAILG 319 >gi|256061823|ref|ZP_05451958.1| F0F1 ATP synthase subunit beta [Brucella neotomae 5K33] gi|261325827|ref|ZP_05965024.1| ATP synthase subunit beta [Brucella neotomae 5K33] gi|261301807|gb|EEY05304.1| ATP synthase subunit beta [Brucella neotomae 5K33] Length = 521 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K + I P + + + TGI+V+D+ P G Sbjct: 134 LGRIMNVIGEPVDEAGPI-KTKATRAIHQNAPEYIEQSTEAEILVTGIKVVDLLAPYAKG 192 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 193 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKL 251 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R L+ +T+AE F +G +VL +D+I RF + E+ Sbjct: 252 GGGEGSKAALVYGQMNEPPGARARVALSGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 311 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 312 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 369 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ R++ +D Sbjct: 370 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPKVVGEEHYAVARQVQSILQRYKALQD 429 Query: 389 IRLIGG 394 I I G Sbjct: 430 IIAILG 435 >gi|86747391|ref|YP_483887.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris HaA2] gi|118573733|sp|Q2J3I4|ATPB_RHOP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|86570419|gb|ABD04976.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris HaA2] Length = 476 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + L I ++ P ++ + TGI+V+D+ P G Sbjct: 90 GRIMNVIGEPVDEQGPVANEGLR-PIHAEAPTYTDQSTEAEILVTGIKVVDLLAPYAKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211 +IG+F G+G+GK+ L+ + + + VGER RE EFIE + G Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R L+ +T+AE+F +G +VL +D+I RF + E++ Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSA 268 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + + Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSITSVQAIYVPADDLTDPAPATSFAH 326 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIR 390 LD VLNR+++E+G YP VDPL S SR+ +E + + ++ +++ +DI Sbjct: 327 LDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARMVQQVLQKYKSLQDII 386 Query: 391 LIGG 394 I G Sbjct: 387 AILG 390 >gi|91773224|ref|YP_565916.1| V-type ATP synthase subunit B [Methanococcoides burtonii DSM 6242] gi|121689234|sp|Q12WL0|VATB_METBU RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|91712239|gb|ABE52166.1| V-type ATP synthase beta chain [Methanococcoides burtonii DSM 6242] Length = 460 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 107/353 (30%), Positives = 181/353 (51%), Gaps = 34/353 (9%) Query: 60 GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ + D+V + VG+ EE +VF ++ S GR+++ G+P+DG Sbjct: 42 GQVLDTSADMVVVQVFEGTVGLNEE---SGVVFSGETIKLPVSKDMLGRILSGAGEPLDG 98 Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 D + SM S++PP E +TGI ID L GQ++ +F+G Sbjct: 99 GPRIIPDKRVDINGASMNPYSRMPP-------EDFIQTGISTIDGTNTLVRGQKLPIFSG 151 Query: 170 SGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222 SG+ + + AR SD V+ + +G E + F++D+ L+++VV + Sbjct: 152 SGLPHNEIALQIARQAKVPGSDEPFAVVFAAMGITNEEAQYFMDDFEKTGALERAVVFLN 211 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281 +D+ + R + P A+T AEY + + D +VL+IL IT + ++R++ E+P RG Sbjct: 212 LADDPAVERIVTPRMALTAAEYLAYEHDMHVLVILTDITNYCEALRQMGAAREEVPGRRG 271 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP ++++L L ER G + KG++T + + GD+ PI D I +G IV++R Sbjct: 272 YPGYMYTDLASLYERAGVIKGIKGSVTQFSILTMPGDDITHPIPDLSGYITEGQIVVSRE 331 Query: 342 LAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390 L +G YPP++ L S+SRL + + + D+ K VS + + E RD+R Sbjct: 332 LHRKGIYPPINVLPSLSRLMNSGIGEGKTRDDHKAVSD--QMYAAYAEGRDLR 382 >gi|88855326|ref|ZP_01129990.1| ATP synthase subunit B [marine actinobacterium PHSC20C1] gi|88815233|gb|EAR25091.1| ATP synthase subunit B [marine actinobacterium PHSC20C1] Length = 506 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 167/304 (54%), Gaps = 14/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156 G+V + G+ ++ D+ ++EI + + PPA ++ + + F+TGI+VID+ T Sbjct: 119 GKVFSVTGEILNADEDGKVNGETVEITERWPIHRKPPAFDQLESKTELFETGIKVIDLLT 178 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ + D +S+ VGER RE + I + Sbjct: 179 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIAEMDEAG 238 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 +K+ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 239 VFEKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVST 298 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + Sbjct: 299 LLGRMPSAVGYQPNLADEMGILQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAH 356 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIR 390 LD L+R +A +G YP VDPL S SR+ D + AD ++ +++ ++ + +E ++I Sbjct: 357 LDATTELSREIASKGLYPAVDPLTSTSRILDPRYLGADHYRVATNVKQILQKNKELQEII 416 Query: 391 LIGG 394 I G Sbjct: 417 AILG 420 >gi|258690306|gb|ACV87915.1| ATP synthase beta subunit [Dysidea sp. KJP-2009] Length = 427 Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 160/305 (52%), Gaps = 15/305 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + +S I + P + ++ +TGI+V+D+ P G Sbjct: 64 LGRIINVIGEPIDERGPVETKSMS-PIHQEAPEFADMNVDQEILETGIKVVDLLAPYTKG 122 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY-------LG 211 +IG+F G+G+GK+ L+ + + + VGER RE + + L Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVALAHGGYSVFAGVGERTREGNDLYHEMITSGVISLK 182 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 183 DDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 242 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 243 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIFVPADDLTDPAPATTFA 300 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VL+R+++E G YP VDPL S SR+ D +E V+ + ++ ++ +DI Sbjct: 301 HLDAMTVLSRAISELGIYPAVDPLDSTSRIMDPNVVGEEHYNVARGVQKVLQDYKSLQDI 360 Query: 390 RLIGG 394 I G Sbjct: 361 IAILG 365 >gi|323138829|ref|ZP_08073892.1| ATP synthase F1, beta subunit [Methylocystis sp. ATCC 49242] gi|322395871|gb|EFX98409.1| ATP synthase F1, beta subunit [Methylocystis sp. ATCC 49242] Length = 475 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 99/296 (33%), Positives = 157/296 (53%), Gaps = 12/296 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR++ ALG+P D + D+ + + PP ++R+ + F+TGI+ ID+ PL Sbjct: 94 LGRLLGALGEPADNGPAFPL-DIERRPIHRAPPEISRRGSSLEIFRTGIKAIDLLAPLVK 152 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LK 215 G + +F G+G+GK+ L+ R+ IS+ +GER RE E + + LG + LK Sbjct: 153 GGKAAMFGGAGVGKTVLIMELIRTTVELHSGISVFGGIGERSREGHELLLE-LGQSGVLK 211 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ +V +E P R A LTA+ IAEYF + +NVLL++D++ R + E++ G Sbjct: 212 QTALVFGQMNEPPGARWRAGLTALAIAEYFRDTAHENVLLLVDNVYRLVQAGGEVSGLLG 271 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 LP GY ++ +E+ ERI + IT++ +V V D+ DP + S LD Sbjct: 272 RLPSRVGYQPTLSTEIAEFEERI--ASVAGAAITSIQAVYVPADDFTDPAVAEIFSHLDS 329 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDI 389 IVL+R +A EG YP +DPLAS S L D D + + I + E ++I Sbjct: 330 SIVLSRDMASEGMYPAIDPLASTSSLLDPRLVGDVHYRTAQDVRSAIAHYRELQEI 385 >gi|260431384|ref|ZP_05785355.1| ATP synthase F1, beta subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260415212|gb|EEX08471.1| ATP synthase F1, beta subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 463 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 9/293 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ G+P+DG D + + P +R + +TGI+VID+ +P+ G Sbjct: 90 GRMLDVFGRPLDGLPEPAS-DCTRPLHRPPPALADRSVRAEVLETGIKVIDLLSPIERGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLK-KSV 218 + G+F G+G+GK+ L++ + +SL +GER RE E + ++ K+V Sbjct: 149 KTGLFGGAGVGKTVLITELINNTVQSHKGVSLFCGIGERSREAEELYREMGAAGVRDKTV 208 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277 ++ +E+P +R + TA+T+AEYF +VLL++D+I RF + E++ G +P Sbjct: 209 MLFGQMNEAPGVRFLVGHTALTMAEYFRDDAHRDVLLLIDNIFRFVQAGSEVSGMLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 + GY ++ +EL L ERI + G IT++ +V V D+ DP A + S L +V Sbjct: 269 SSVGYQPTLATELAALQERI--ASTRHGAITSIQAVYVPADDFTDPAAAHIFSHLSASVV 326 Query: 338 LNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L+R A EG YP VDPL+S S L+ + ++ + +EE RDI Sbjct: 327 LSRKRASEGLYPAVDPLSSTSVMLSPSVVGQRHYDIARAVRSTLAEYEELRDI 379 >gi|254509593|ref|ZP_05121660.1| ATP synthase F1, beta subunit [Rhodobacteraceae bacterium KLH11] gi|221533304|gb|EEE36292.1| ATP synthase F1, beta subunit [Rhodobacteraceae bacterium KLH11] Length = 474 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 164/311 (52%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR++N +G PID + + + + P + Q E TGI+V+D+ P Sbjct: 84 ATLGRILNVVGDPIDEKGPVEASE--ARAIHQPAPTFDEQSTESEVLVTGIKVVDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 142 AKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESN 199 Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264 + DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF Sbjct: 200 VIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQ 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP Sbjct: 260 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKSGSITSVQAIYVPADDLTDPA 317 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRF 383 + + LD VLNR+++E+G YP VDPL S SRL D A +E V++ + ++ R+ Sbjct: 318 PATSFAHLDATTVLNRAISEKGIYPAVDPLDSSSRLLDPAIVGEEHYAVATDVQQILQRY 377 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 378 KSLQDIIAILG 388 >gi|307942824|ref|ZP_07658169.1| ATP synthase F1, beta subunit [Roseibium sp. TrichSKD4] gi|307773620|gb|EFO32836.1| ATP synthase F1, beta subunit [Roseibium sp. TrichSKD4] Length = 474 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K D I P + + + TGI+V+D+ P G Sbjct: 87 LGRIMNVIGEPVDEAGEI-KHDDKRGIHQDAPEFIEQSTEAEILVTGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVR----EFIEDYL--- 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYWEMIESGVNKE 204 Query: 211 -GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +TIAE F +G +VL +D+I RF + E+ Sbjct: 205 GGGEGSKAALVYGQMNEPPGARARVALTGLTIAEDFRDQGQDVLFFVDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V +V V D+ DP S Sbjct: 265 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTHKGSITSVQAVYVPADDLTDPAPASTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VLNRS+AE+G YP VDPL S SR+ +E + ++ + R++ +D Sbjct: 323 AHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLSANIIGEEHYETARAVQVTLQRYKALQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|262374657|ref|ZP_06067930.1| ATP synthase F1, beta subunit [Acinetobacter junii SH205] gi|262310447|gb|EEY91538.1| ATP synthase F1, beta subunit [Acinetobacter junii SH205] Length = 464 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + + I + P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD +VL+R +A G YP +DPL S SR D E ++ S+ +++ R++E + Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELK 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|34496127|ref|NP_900342.1| F0F1 ATP synthase subunit beta [Chromobacterium violaceum ATCC 12472] gi|81656847|sp|Q7P095|ATPB_CHRVO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|34101981|gb|AAQ58348.1| H+-transporting two-sector ATPase, beta subunit [Chromobacterium violaceum ATCC 12472] Length = 465 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 156/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG P+D + D I P +TGI+VID+ P Sbjct: 80 AATLGRIMDVLGNPVDEAGPVAT-DARRAIHQAAPKFDELSAAADILETGIKVIDLLCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AE+F + KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEHFRDEKDENGKGRDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKDGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD +VL+R +A G YP VDPL S SR D DE V+ + + R++E Sbjct: 316 TFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEHYTVARGVQSTLQRYKEL 375 Query: 387 RDIRLIGG 394 RDI I G Sbjct: 376 RDIIAILG 383 >gi|156364605|ref|XP_001626437.1| predicted protein [Nematostella vectensis] gi|156213313|gb|EDO34337.1| predicted protein [Nematostella vectensis] Length = 416 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + D I ++ P + ++ +TGI+V+D+ P G Sbjct: 29 LGRIINVIGEPIDERGPV-ETDKRAAIHAEAPEFVEMSTEQEILETGIKVVDLLAPYAKG 87 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210 +IG+F G+G+GK+ L+ + A++ V VGER RE + + L Sbjct: 88 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIMSGVINL 146 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF K G +VLL +D+I RF + E+ Sbjct: 147 KDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSEV 206 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 207 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 264 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D E ++ + ++ ++ +D Sbjct: 265 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNIVGTEHYEIARGVQKILQDYKSLQD 324 Query: 389 IRLIGG 394 I I G Sbjct: 325 IIAILG 330 >gi|90409883|ref|ZP_01217900.1| ATP synthase subunit B [Photobacterium profundum 3TCK] gi|90329236|gb|EAS45493.1| ATP synthase subunit B [Photobacterium profundum 3TCK] Length = 461 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 157/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG PID +G+ S I + P + + +TG++VID+ P G Sbjct: 87 GRIMNVLGHPIDECGEIGE-KTSYPIHREPPSYEEQANSTELLETGVKVIDLICPFAKGG 145 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + KG+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTHKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E ++ + ++ R++E +DI I G Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGTEHYEVARGVQTVLQRYKELKDIIAILG 380 >gi|310644377|ref|YP_003949136.1| strongly ATP synthase subunit beta [Paenibacillus polymyxa SC2] gi|309249328|gb|ADO58895.1| Strongly ATP synthase subunit beta [Paenibacillus polymyxa SC2] Length = 466 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 94/301 (31%), Positives = 155/301 (51%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG PID + + + I + P + +TGI+VID+ P Sbjct: 88 ATLGRVFNVLGTPIDNGADMSEAARN-PIHRQAPSFEELTTQAEMLETGIKVIDLLAPYA 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + + + IS+ VGER RE + + + Sbjct: 147 KGGKVGLFGGAGVGKTVTIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMRDSGVIN 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 207 KTAMVFGQMNEPPGARLRVALTGLTMAEYFRDQEGRDVLLFIDNIFRFTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R ++E G YP VDPLAS SR L+ + + + ++ R+ E +DI I Sbjct: 325 TTNLERKISEMGIYPAVDPLASSSRILSPDVVGEEHYNVAQGVKQILARYNELQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|89074728|ref|ZP_01161186.1| ATP synthase subunit B [Photobacterium sp. SKA34] gi|89049492|gb|EAR55053.1| ATP synthase subunit B [Photobacterium sp. SKA34] Length = 468 Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 101/333 (30%), Positives = 167/333 (50%), Gaps = 16/333 (4%) Query: 75 VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 +G + + G V + GR + GR++N LG+PID +G+ + I + P Sbjct: 58 MGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGEQE-RYAIHREAP 116 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 ++ V + +TG++VID+ P G +IG+F G+G+GK+ + + +S Sbjct: 117 SYEDQSNVTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLS 176 Query: 194 L---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIA 242 + VGER RE +F + + K +V +E P R LT +T+A Sbjct: 177 VFAGVGERTREGNDFYYEMQEAGVVNIENPEESKVAMVYGQMNEPPGNRLRVALTGLTMA 236 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + Sbjct: 237 ERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TST 294 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + G+IT+V +V V D+ DP + + LD +VL+R +A G YP +DPL S SR+ D Sbjct: 295 KSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLD 354 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + + L+ R++E +DI I G Sbjct: 355 PLVVGQEHYDIARGVQSLLQRYKELKDIIAILG 387 >gi|255263993|ref|ZP_05343335.1| ATP synthase F1, beta subunit [Thalassiobium sp. R2A62] gi|255106328|gb|EET49002.1| ATP synthase F1, beta subunit [Thalassiobium sp. R2A62] Length = 477 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 164/310 (52%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + K D I + P + +TGI+VID+ P Sbjct: 87 ATLGRILNVVGEPVD-EGAPVKADEHRSIHADAPEFAEQSTESVVLETGIKVIDLLAPYA 145 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED-- 208 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 146 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESGV 203 Query: 209 YLGDNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 + DNL K +V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 204 IVPDNLVDSKVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 263 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ ++ ERI + + G+IT+V +V V D+ DP Sbjct: 264 GSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKSGSITSVQAVYVPADDLTDPAP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFE 384 + + LD VLNR+++E+G YP VDPL S SRL D + A+ ++ + ++ R++ Sbjct: 322 ATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRLMDPSIVGAEHYQVARDVQGILQRYK 381 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 382 SLQDIIAILG 391 >gi|332375360|gb|AEE62821.1| unknown [Dendroctonus ponderosae] Length = 515 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + L+ I ++ P ++ ++ TGI+V+ Sbjct: 120 IRIPVGVETLGRIMNVIGEPIDERGPIPTDKLAA-IHAEAPEFVDMSVEQEILVTGIKVV 178 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 179 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 237 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 238 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 297 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 298 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 355 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E + + + Sbjct: 356 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNIARGVQKI 415 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 416 LQDYKSLQDIIAILG 430 >gi|167564618|ref|ZP_02357534.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis EO147] gi|167571760|ref|ZP_02364634.1| F0F1 ATP synthase subunit beta [Burkholderia oklahomensis C6786] Length = 459 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + + I K P + +TGI+VID+ P G Sbjct: 84 GRIMDVLGRPIDEAGPI-ESEHTRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 142 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + LD +V Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 377 >gi|315635259|ref|ZP_07890536.1| ATP synthase F1 sector beta subunit [Aggregatibacter segnis ATCC 33393] gi|315476005|gb|EFU66760.1| ATP synthase F1 sector beta subunit [Aggregatibacter segnis ATCC 33393] Length = 457 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGDPIDEQGPIGEEE-RWSIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|311898389|dbj|BAJ30797.1| putative ATP synthase subunit beta [Kitasatospora setae KM-6054] Length = 484 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 93/270 (34%), Positives = 154/270 (57%), Gaps = 9/270 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G+V NALG+ ++ D + + + ++ I K P + + F+TGI+VID+ TP Sbjct: 103 GKVFNALGEVLNVDKAEFESQVQVKWPIHRKAPNFSELESKTEMFETGIKVIDLLTPYVT 162 Query: 161 GQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ ++ ++ F V + + VGER RE + I++ + L K Sbjct: 163 GGKIGLFGGAGVGKTVLIQEMIYRVAENFGGVSVFAGVGERTREGNDLIDEMVDSGVLDK 222 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G Sbjct: 223 TALVFGQMDEPPGTRLRVALSALTMAEYFRDVEKQDVLLFIDNIFRFTQAGSEVSTLLGR 282 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD Sbjct: 283 MPSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDAT 340 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 VL+R ++E+G YP VDPL S SR+ D + Sbjct: 341 TVLSRPISEKGIYPAVDPLDSTSRILDPRY 370 >gi|255020241|ref|ZP_05292310.1| ATP synthase beta chain [Acidithiobacillus caldus ATCC 51756] gi|254970383|gb|EET27876.1| ATP synthase beta chain [Acidithiobacillus caldus ATCC 51756] Length = 469 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 93/297 (31%), Positives = 155/297 (52%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG P+DG + + D I P + +TG++VID+ P G Sbjct: 92 GRIMNVLGDPVDGKGEV-QCDQRTPIHRAAPAFDELAASTEILETGVKVIDLVCPFAKGG 150 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ L+ R+ + + + +GER RE +F + L K Sbjct: 151 KVGLFGGAGVGKTVLMMELIRNIAIEHTGYSVFAGIGERTREGNDFYHEMTESKVLDKVA 210 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 + +E P R LT +T+AE+F +G ++L+ +D+I R+ + E++ G +P Sbjct: 211 LCYGQMNEPPGNRLRVGLTGLTMAEHFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMPS 270 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 271 AVGYQPTLAEEMGKLQERI--TSTKVGSITSVQAVYVPADDITDPSPATTFAHLDATVVL 328 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R +AE G YP +DPL S SR D E V+ + + R++E +DI I G Sbjct: 329 SRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARACQKTLQRYKELQDIIAILG 385 >gi|302669540|ref|YP_003829500.1| ATP synthase F1 beta subunit AtpD1 [Butyrivibrio proteoclasticus B316] gi|302394013|gb|ADL32918.1| ATP synthase F1 beta subunit AtpD1 [Butyrivibrio proteoclasticus B316] Length = 464 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 106/334 (31%), Positives = 171/334 (51%), Gaps = 17/334 (5%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GR+ N LG P+D G + I P ++ + F+TGI+V+D+ Sbjct: 82 PVGDECLGRIFNLLGDPVDNGPDPGAKE-RWPIHRPAPAYEDQVPATEIFETGIKVVDLI 140 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + IS+ VGER RE + + Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGISVFTGVGERTREGNDLYGEMKES 200 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L K+ +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ Sbjct: 201 GVLDKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFT 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R +A +G YP VDPL S SR L+ + ++ + ++ R+ E +DI Sbjct: 319 HLDATTVLSRDIASKGIYPAVDPLDSTSRILSPDIVGKEHYEVAKGVQQVLQRYRELQDI 378 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I G+D + ++ V++ + +FL QS Sbjct: 379 IAI----MGMDELSEEDKLTVYRARKVQNFLSQS 408 >gi|257785096|ref|YP_003180313.1| ATP synthase F1, beta subunit [Atopobium parvulum DSM 20469] gi|257473603|gb|ACV51722.1| ATP synthase F1, beta subunit [Atopobium parvulum DSM 20469] Length = 493 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 102/327 (31%), Positives = 167/327 (51%), Gaps = 17/327 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GRV N +G+P+DG + D+ + P E F+TGI+ ID+ P G Sbjct: 111 GRVWNVMGQPVDGGEI--PEDVEYYPIHHPAPLFEELTTETEIFETGIKAIDLLEPYVRG 168 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 + G+F G+G+GK+ L+ + + + VGER RE + F+E + K+ Sbjct: 169 GKTGLFGGAGVGKTVLIQELINNLAQQHGGTSVFTGVGERTREGTDLFLEMTESGVINKT 228 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L +T AEYF +G +VLL +D+I RF+ + E++ G +P Sbjct: 229 CLVYGQMNEPPGARMRVALAGLTTAEYFRDQGQDVLLFIDNIFRFSQAGSEVSALLGRMP 288 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + ++G+IT+V +V V D+ DP + + LD V Sbjct: 289 SAVGYQPTLATEMGELQERI--TSTKEGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 346 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R++ E G YP VDPLAS S D + +E ++ ++ + + + +DI I Sbjct: 347 LSRAITELGIYPAVDPLASSSSALDPSIVGEEHYRVAMAVQETLQEYSDLQDIIAI---- 402 Query: 397 PGVDLILD---KAVHQVPIIYDFLKQS 420 G+D + + + V + I FL QS Sbjct: 403 LGMDELSEEQQRTVARARKIQQFLSQS 429 >gi|88607774|ref|YP_505093.1| F0F1 ATP synthase subunit beta [Anaplasma phagocytophilum HZ] gi|118573505|sp|Q2GKK8|ATPB_ANAPZ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|88598837|gb|ABD44307.1| ATP synthase F1, beta subunit [Anaplasma phagocytophilum HZ] Length = 479 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 111/342 (32%), Positives = 178/342 (52%), Gaps = 20/342 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + +S GD + G + GRV + LG+PIDG +G D+ Sbjct: 60 VVRCVAMGSTDGLSRGDKFINTGSPISVPVGRKTLGRVFDVLGEPIDGVGDVG-ADVEYH 118 Query: 128 IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182 + P ++ Q+V + TGI+VID+ P G ++G+F G+G+GK+ L+S A Sbjct: 119 SIHAHAPKLSEQKVATEVLVTGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIMELISNIA 178 Query: 183 RSDCFDKVIISLVGERGRE----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMA 234 R+ V VGER RE RE +E + D +KS V+V +E P R Sbjct: 179 RAHKGFSVFAG-VGERTREGNDLYREMVESGVINEDEREKSQAVLVYGQMNEPPGARMRV 237 Query: 235 PLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 L+A+T+AEYF ++G +VL +D++ RF S E++ G +P A GY ++ SE+ + Sbjct: 238 ALSALTMAEYFRDAEGQDVLFFVDNVFRFTQSGSEVSALLGRVPSAVGYQPTLASEMGAM 297 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 ERI + KG+IT+V ++ V D+ DP + LD VL+R ++E G YP VDP Sbjct: 298 QERI--TSTHKGSITSVQAIYVPADDLTDPAPSTSFLHLDSTTVLSRQISELGIYPAVDP 355 Query: 354 LASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L S S+ L+ A+ ++ + ++ ++ +DI I G Sbjct: 356 LDSTSQALSVDVVGAEHYEVAREVQRILQTYKSLQDIIAILG 397 >gi|226487056|emb|CAX75393.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Schistosoma japonicum] Length = 517 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 166/307 (54%), Gaps = 28/307 (9%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N +G+PID +G + ++MS + P ++ ++ +TGI+V+D+ P Sbjct: 131 GRIMNVIGEPIDE-----RGPIKTKMMSGIHQDAPNFIDMSTEQEILETGIKVVDLLAPY 185 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------I 206 G +IG+F G+G+GK+ L+ + AR+ V VGER RE + + Sbjct: 186 VKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREGNDLYHEMITTGV 244 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 D G+N K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 245 IDLKGNNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFVDNIFRFTQA 303 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ SG +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP Sbjct: 304 GSEVSALSGRIPSAVGYQPTLATDMGSMQERI--TSTKKGSITSVQAIYVPADDLTDPAP 361 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R++AE G YP VDPL S SR+ D +E V+ I +E Sbjct: 362 ATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDPNIVGEEHYSVARGVQKI--LQE 419 Query: 386 TRDIRLI 392 R ++ I Sbjct: 420 NRSLQDI 426 >gi|254581048|ref|XP_002496509.1| ZYRO0D01760p [Zygosaccharomyces rouxii] gi|238939401|emb|CAR27576.1| ZYRO0D01760p [Zygosaccharomyces rouxii] Length = 505 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 112/353 (31%), Positives = 182/353 (51%), Gaps = 30/353 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I ++ P + + + +TGI+V+D+ P G Sbjct: 119 LGRIINVIGEPIDEAGPINT-TVRRPIHAEAPSFVEQSTNSEVLETGIKVVDLLAPYARG 177 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE +E D Sbjct: 178 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMMETGVIDL 236 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 G++ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 237 KGES--KVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSE 294 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI ++K G++T+V +V V D+ DP + Sbjct: 295 VSALLGRIPSAVGYQPTLSTDMGALQERIATTQK--GSVTSVQAVYVPADDLTDPAPATT 352 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D + +E S++ + ++ + Sbjct: 353 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASIVGEEHYNTASNVQMTLQAYKSLQ 412 Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 DI I G+D + ++ V + I FL Q ++ VF I KL Sbjct: 413 DIIAI----LGMDELSEQDKLTVERARKIQRFLSQP---FATAQVFTGIEGKL 458 >gi|296128926|ref|YP_003636176.1| ATP synthase F1, beta subunit [Cellulomonas flavigena DSM 20109] gi|296020741|gb|ADG73977.1| ATP synthase F1, beta subunit [Cellulomonas flavigena DSM 20109] Length = 493 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 164/304 (53%), Gaps = 19/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156 G+V N G+ ++ L +G+ E+ + + PPA ++ + + F+TGI+VID+ T Sbjct: 110 GKVFNVTGEVLN----LAEGE-KFEVTERWPIHRKPPAFDQLESKTQMFETGIKVIDLLT 164 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212 P G +IG+F G+G+GK+ L+ + D +S+ VGER RE + I E Sbjct: 165 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIVEMEEAG 224 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K+ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 225 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVST 284 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + Sbjct: 285 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSLQAIYVPADDYTDPAPATTFAH 342 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPLAS SR+ D + E + + + ++ R +E +DI Sbjct: 343 LDATTELSREIASRGLYPAVDPLASTSRILDPRYVGQEHYDVATQVKSILQRNKELQDII 402 Query: 391 LIGG 394 I G Sbjct: 403 AILG 406 >gi|225027468|ref|ZP_03716660.1| hypothetical protein EUBHAL_01724 [Eubacterium hallii DSM 3353] gi|224955203|gb|EEG36412.1| hypothetical protein EUBHAL_01724 [Eubacterium hallii DSM 3353] Length = 465 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + + D ++ + PP Q + +TGI+VID+ P G Sbjct: 86 GRLFNVLGETIDDGEPIK--DAPKMVIHREPPTFEEQNPAVEILETGIKVIDLLAPYAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN--LKK 216 +IG+F G+G+GK+ L+ + + I + VGER RE + + +G++ L K Sbjct: 144 GKIGLFGGAGVGKTVLIQELISNIATEHGGYSIFTGVGERSREGNDLWTE-MGESGVLAK 202 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF K +VLL +D+I RF + E++ G Sbjct: 203 TALVFGQMNEPPGARMRVAETGLTMAEYFRDEKKQDVLLFIDNIFRFTQAGSEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E ++ + + +++E +DI I G Sbjct: 321 TVLSRKIVEQGIYPAVDPLESSSRILEADIVGEEHYEVARKVQEALQKYKELQDIIAILG 380 >gi|6625703|gb|AAF19362.1|AF188265_8 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 460 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +D+ I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDVIAILG 379 >gi|77166520|ref|YP_345045.1| F0F1 ATP synthase subunit beta [Nitrosococcus oceani ATCC 19707] gi|254435893|ref|ZP_05049400.1| ATP synthase F1, beta subunit [Nitrosococcus oceani AFC27] gi|118573708|sp|Q3J6N1|ATPB_NITOC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|76884834|gb|ABA59515.1| ATP synthase F1 subcomplex beta subunit [Nitrosococcus oceani ATCC 19707] gi|207089004|gb|EDZ66276.1| ATP synthase F1, beta subunit [Nitrosococcus oceani AFC27] Length = 458 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+P+D +G+ + I K P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGEPVDEAGPVGEEE-RWSIHRKAPAYEELSPATELLETGIKVIDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFAGVGERTREGNDFYHEMKDSQVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VLL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEFFREEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR D E V+ ++ + R++E +DI I G Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYQVARAVQGNLQRYKELKDIIAILG 377 >gi|298245831|ref|ZP_06969637.1| ATP synthase F1, beta subunit [Ktedonobacter racemifer DSM 44963] gi|297553312|gb|EFH87177.1| ATP synthase F1, beta subunit [Ktedonobacter racemifer DSM 44963] Length = 481 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 104/305 (34%), Positives = 163/305 (53%), Gaps = 21/305 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ--RVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+ +D + + D + + P + Q +E F+TG++VID+ P Sbjct: 101 LGRIFNVLGQAVDNKEEVE--DAPRYPIHRHAPTLEDQVSNIEI-FETGLKVIDLICPFM 157 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G +IG F G+G+GK+ L++ A+ V VGER RE E IE + Sbjct: 158 KGGKIGTFGGAGVGKTVTIQELINNIAKGHGGYSVFAG-VGERTREGNDLYHEMIEAGVI 216 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D L +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 217 DRL---AMVFGQMNEPPGSRLRVALTGLTMAEYFRDEEGKDVLLFIDNIFRFTQAGAEVS 273 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + +KG+IT++ +V V D++ DP + + Sbjct: 274 ALLGRMPSAVGYQPTLAEEMGELQERI--TSTKKGSITSMQAVYVPADDYTDPAPATTFA 331 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD IVL RS+AE+ +P VDPL+S SR+ D +E V+ + ++ R++E +DI Sbjct: 332 HLDSTIVLERSIAEKAIFPAVDPLSSTSRILDPQIVGNEHYDVARGVQKVLQRYKELQDI 391 Query: 390 RLIGG 394 I G Sbjct: 392 IAILG 396 >gi|218887916|ref|YP_002437237.1| F0F1 ATP synthase subunit beta [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|226740189|sp|B8DRD2|ATPB_DESVM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|218758870|gb|ACL09769.1| ATP synthase F1, beta subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 471 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 160/301 (53%), Gaps = 9/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + K D + I P + + +TGI+V+D+ P Sbjct: 89 ASLGRIMNVVGRPVDEMGPI-KTDKYLPIHRPAPEFTEQNTKVELLETGIKVVDLLIPFP 147 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ +L + IS+ VGER RE + + L+ Sbjct: 148 KGGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLE 207 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+ ++ +E P R LTA+ AEYF + +VLL +D+I RF + E++ G Sbjct: 208 KAALIYGQMNEPPGARARVALTALACAEYFRDIENQDVLLFVDNIFRFTQAGSEVSALLG 267 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + S LDG Sbjct: 268 RMPSAVGYQPTLGTDLGGLQERI--TSTVKGSITSVQAVYVPADDLTDPAPATTFSHLDG 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R +AE G YP VDPL S SR+ D E V+ ++ ++ ++++ +DI I Sbjct: 326 TLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGPEHYSVARAVQQVLQKYKDLQDIIAIL 385 Query: 394 G 394 G Sbjct: 386 G 386 >gi|167838424|ref|ZP_02465283.1| F0F1 ATP synthase subunit beta [Burkholderia thailandensis MSMB43] Length = 459 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + I K P + +TGI+VID+ P G Sbjct: 84 GRIMDVLGRPIDEAGPI-VSEHKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGG 142 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + LD +V Sbjct: 262 SAVGYQPTLAEEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E + + + R++E RDI I G Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILG 377 >gi|90581151|ref|ZP_01236950.1| ATP synthase subunit B [Vibrio angustum S14] gi|90437672|gb|EAS62864.1| ATP synthase subunit B [Vibrio angustum S14] Length = 468 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 101/333 (30%), Positives = 167/333 (50%), Gaps = 16/333 (4%) Query: 75 VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 +G + + G V + GR + GR++N LG+PID +G+ + I + P Sbjct: 58 MGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGEQE-RYAIHREAP 116 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 ++ V + +TG++VID+ P G +IG+F G+G+GK+ + + +S Sbjct: 117 SYEDQSNVTELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALKHSGLS 176 Query: 194 L---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIA 242 + VGER RE +F + + K +V +E P R LT +T+A Sbjct: 177 VFAGVGERTREGNDFYYEMQEAGVVNIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMA 236 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + Sbjct: 237 ERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TST 294 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + G+IT+V +V V D+ DP + + LD +VL+R +A G YP +DPL S SR+ D Sbjct: 295 KSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLD 354 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + + L+ R++E +DI I G Sbjct: 355 PLVVGQEHYDIARGVQSLLQRYKELKDIIAILG 387 >gi|37522139|ref|NP_925516.1| F0F1 ATP synthase subunit beta [Gloeobacter violaceus PCC 7421] gi|81709449|sp|Q7NHG7|ATPB_GLOVI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|35213139|dbj|BAC90511.1| ATP synthase beta subunit [Gloeobacter violaceus PCC 7421] Length = 478 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 103/304 (33%), Positives = 159/304 (52%), Gaps = 15/304 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID LG ++ I P + + F+TGI+VID+ P Sbjct: 94 STLGRIFNVLGEPID---ELGPVEIVDKFSIHRSAPKFTDLVTQPEIFETGIKVIDLLAP 150 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + ++ N Sbjct: 151 YRKGGKIGLFGGAGVGKTVLIQELIHNIAKEHSGVSVFGGVGERTREGNDLYNEFKESNV 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIREIAT 271 L + +V +E P R LTA+T+AEYF SK D VLL +D+I RF + E++ Sbjct: 211 LGQVALVYGQMNEPPGARMRVGLTALTMAEYFRDVSKQD-VLLFIDNIFRFVQAGSEVSA 269 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ L ERI + +G+IT+V +V V D+ DP + + Sbjct: 270 LLGRMPSAVGYQPTLGTEMGDLQERI--TSTNEGSITSVQAVYVPADDLTDPAPATTFAH 327 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD VL+R LA G YP VDPL+S S + A +E + + + R+++ +DI Sbjct: 328 LDATTVLSRQLASLGIYPAVDPLSSTSTMLQPAVVGEEHYNIARGVQSTLQRYKDLQDII 387 Query: 391 LIGG 394 I G Sbjct: 388 AILG 391 >gi|332291570|ref|YP_004430179.1| ATP synthase F1, beta subunit [Krokinobacter diaphorus 4H-3-7-5] gi|332169656|gb|AEE18911.1| ATP synthase F1, beta subunit [Krokinobacter diaphorus 4H-3-7-5] Length = 502 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 161/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG D+L K GD + I P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGMDNLPKAGDAGLSIHRSAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 208 -----------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D +G K+ V +E P R L+ +TIAEYF Sbjct: 210 DDFMHSMEEGGWDLSKVDKIGMRDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTAEI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 ++ + L+ R++E +DI I G Sbjct: 388 LGSEHYNTAQRVKELLQRYKELQDIIAILG 417 >gi|296160921|ref|ZP_06843733.1| ATP synthase F1, beta subunit [Burkholderia sp. Ch1-1] gi|295888810|gb|EFG68616.1| ATP synthase F1, beta subunit [Burkholderia sp. Ch1-1] Length = 496 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 154/295 (52%), Gaps = 12/295 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ G D +L I PP + + F TGI+V+D+ PL G Sbjct: 102 GRLLDVTGATRDDGPALPAQIERRPIHRAAPPLASLKGTSTLFSTGIKVLDLLAPLAQGG 161 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 + +F G+G+GK+ L+ +M R + + + VGER RE E + D L + Sbjct: 162 KAAMFGGAGVGKTVLVMELIHAMVERYEGIS--VFAGVGERSREGHEMLLDMRTSGVLPR 219 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +E P R P TA+TIAEYF + NVLL++D++ RF + E++ G Sbjct: 220 TVLVYGQMNEPPGARWRVPFTALTIAEYFRDERRQNVLLLMDNVFRFVQAGAEVSGLLGR 279 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P GY ++ +E+ L ERI ++TA+ +V V D+ DP ++ + LD Sbjct: 280 MPSRVGYQPTLATEVAGLQERI--VSVGGVSVTAIEAVYVPADDFTDPAVTAIAAHLDSM 337 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 +VL+RS+A EG YP VDP+AS S L D +E V++ + +I + E +D+ Sbjct: 338 VVLSRSMAAEGMYPAVDPIASSSILLDPLVVGEEHAAVATEVRRIIEHYRELQDV 392 >gi|269219864|ref|ZP_06163718.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 848 str. F0332] gi|269210769|gb|EEZ77109.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 848 str. F0332] Length = 484 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 100/297 (33%), Positives = 162/297 (54%), Gaps = 15/297 (5%) Query: 103 GRVINALGK--PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLC 159 G V N G+ +DGD+ L + + I K PPA + E + F+TGI+VID+ TP Sbjct: 102 GHVFNVFGECLNLDGDEVL-QVEERWPIHRK-PPAFDELEPETRMFQTGIKVIDLLTPYV 159 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--L 214 G +IG+F G+G+GK+ L+ + D +S+ VGER RE + I + +G+ L Sbjct: 160 QGGKIGLFGGAGVGKTVLIQEMIQRVAQDHDGVSVFAGVGERTREGNDLINE-MGEAGVL 218 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K+ +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T Sbjct: 219 DKTALVFGQMDEPPGVRLRVALSGLTMAEYFRDVENQDVLLFIDNIFRFTQAGSEVSTLL 278 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 279 GRMPSAVGYQPTLADEMGSLQERI--TSTRGHSITSLQAIYVPADDYTDPAPATTFAHLD 336 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R +A G YP VDPL S SR+ D E ++ + + ++ + +E +DI Sbjct: 337 ATTQLSREIASRGLYPAVDPLTSTSRILDPQVVGQEHYEVATRVKAILQKNKELQDI 393 >gi|45593084|gb|AAS68128.1| ATP synthase beta subunit [Bifidobacterium animalis subsp. lactis DSM 10140] Length = 495 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 95/269 (35%), Positives = 149/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 142 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 201 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 202 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 261 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 262 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGH--S 319 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A G YP VDPLAS SR+ D + Sbjct: 320 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLASTSRILDPRYV 379 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 380 GQAHYDCANRVKAILQRNKELQDIIALIG 408 >gi|329939839|ref|ZP_08289140.1| ATP synthase subunit beta [Streptomyces griseoaurantiacus M045] gi|329301409|gb|EGG45304.1| ATP synthase subunit beta [Streptomyces griseoaurantiacus M045] Length = 478 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 103/327 (31%), Positives = 177/327 (54%), Gaps = 17/327 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ D+S +G+ I K P + + F+TG++VID+ TP G Sbjct: 101 GKVFNTLGEVLNVDESY-EGE-RWSIHRKAPNFDALESKTEMFETGVKVIDLLTPYVKGG 158 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + IE+ + K+ Sbjct: 159 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEEMAESGVIDKTA 218 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 219 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 278 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 279 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 336 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R ++E+G YP VDPL S SR+ D + +AD + ++ ++++ +DI I Sbjct: 337 LSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYNTAMRVKTVLQKYKDLQDIIAI---- 392 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 393 LGIDELGEEDKLTVHRARRVERFLSQN 419 >gi|225848289|ref|YP_002728452.1| F0F1 ATP synthase subunit beta [Sulfurihydrogenibium azorense Az-Fu1] gi|225643296|gb|ACN98346.1| ATP synthase F1, beta subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 474 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 160/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+PID + + I + P + + F+TGI+VID+ PL G Sbjct: 94 LGRIFNVVGQPIDEAGPV-NAEEYWPIFREAPSFEEQSTKVEQFETGIKVIDLLVPLIKG 152 Query: 162 QRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 ++G+F G+G+GK+ L+ A+ V++ VGER RE + ++E L Sbjct: 153 GKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLWMEMKESGVLPY 211 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P +R T +TIAEYF + +VL+ +D+I RF + E++T G Sbjct: 212 TAMVYGQMNEPPGVRFRVAHTGLTIAEYFRDVEKQDVLIFIDNIFRFVQAGAEVSTLLGR 271 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 LP A GY ++ +++ + ERI ++ G+IT++ +V V D+ DP S+ + LD Sbjct: 272 LPSAVGYQPTLGTDVGEVQERIASTKN--GSITSIQAVYVPADDITDPAPASIFAHLDAT 329 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394 IVL R L E G YP +DPL S SR + +E V+ T ++ R++E ++I I G Sbjct: 330 IVLQRRLTELGIYPAIDPLESTSRALAPEYVGEEHYYVARETQRILQRYKELQEIIAILG 389 >gi|119350479|gb|ABL63190.1| AtpB [Chlorococcum ellipsoideum] Length = 392 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 163/307 (53%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + +G+ ++ I + P ++ F+TGI+V+D+ P G Sbjct: 38 LGRIFNVLGEPVDNLGPVKQGE-TLPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 96 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 97 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 156 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 157 NLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFVQAGAEV 216 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 217 SALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 274 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEETR 387 + LD VL+R+LA +G YP VDPL S S + + W EK V+ S+ + R++E + Sbjct: 275 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYVTAQSVKKTLQRYKELQ 333 Query: 388 DIRLIGG 394 DI I G Sbjct: 334 DIIAILG 340 >gi|224283631|ref|ZP_03646953.1| F0F1 ATP synthase subunit beta [Bifidobacterium bifidum NCIMB 41171] gi|310288108|ref|YP_003939367.1| ATP synthase beta chain [Bifidobacterium bifidum S17] gi|311064981|ref|YP_003971707.1| ATP synthase subunit beta [Bifidobacterium bifidum PRL2010] gi|313140782|ref|ZP_07802975.1| ATP synthase subunit beta [Bifidobacterium bifidum NCIMB 41171] gi|309252045|gb|ADO53793.1| ATP synthase beta chain [Bifidobacterium bifidum S17] gi|310867301|gb|ADP36670.1| AtpD ATP synthase beta chain [Bifidobacterium bifidum PRL2010] gi|313133292|gb|EFR50909.1| ATP synthase subunit beta [Bifidobacterium bifidum NCIMB 41171] Length = 494 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 155/274 (56%), Gaps = 12/274 (4%) Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 137 IHRKPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 196 Query: 188 DKVIISL---VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIA 242 + +S+ VGER RE + I + +G+ L+K+ +V DE P R PLTA+T+A Sbjct: 197 NHGGVSVFAGVGERTREGNDLIGE-MGEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMA 255 Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 EYF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 256 EYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TS 313 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ Sbjct: 314 TRGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRIL 373 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 D + + + ++ R +E +D I LIG Sbjct: 374 DPRYVGQAHYDCANRVKAILQRNKELQDIIALIG 407 >gi|256575374|gb|ACU87654.1| AtpD [Gallibacterium anatis] gi|256575378|gb|ACU87655.1| AtpD [Gallibacterium anatis] gi|256575380|gb|ACU87656.1| AtpD [Gallibacterium anatis] gi|270357554|gb|ACZ81009.1| AtpB [Gallibacterium anatis] Length = 452 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G+ I P + + +TGI+VID+ P G Sbjct: 83 GRIMNVLGEPIDERGPIGE-KARWSIHRAAPSYEEQANSTELLETGIKVIDLVCPFAKGG 141 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKVS 201 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 261 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 262 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 319 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 SRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|186684534|ref|YP_001867730.1| F0F1 ATP synthase subunit beta [Nostoc punctiforme PCC 73102] gi|226740655|sp|B2IUL2|ATPB_NOSP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|186466986|gb|ACC82787.1| ATP synthase F1, beta subunit [Nostoc punctiforme PCC 73102] Length = 482 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + S+ I P + + F+TGI+V+D+ TP Sbjct: 95 ATLGRIFNVLGEPVDNRGPV-NAEASLPIHRSAPKFTDLETKPSVFETGIKVVDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210 G +IG+F G+G+GK+ ++ + +S+ VGER RE E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +NL +S +V +E P R L+ +T+AEYF +VLL +D+I RF + Sbjct: 214 NENLNESKIALVYGQMNEPPGARMRVGLSGLTVAEYFRDVNKQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + DE ++ + R++E Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|251793675|ref|YP_003008405.1| ATP synthase F1 subunit beta [Aggregatibacter aphrophilus NJ8700] gi|247535072|gb|ACS98318.1| ATP synthase F1, beta subunit [Aggregatibacter aphrophilus NJ8700] Length = 457 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDERGPIG-AEEEWAIHRSAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|18033075|gb|AAL56979.1|AF326331_1 ATP synthase [Pasteurella canis] Length = 431 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 156/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + + + PP+ Q + +TGI+VID+ P G Sbjct: 72 GRIMNVLGEPIDEQGPIGAEENWS--IHRAPPSYEEQSNSTELLETGIKVIDLVCPFAKG 129 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 130 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 189 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 190 SPVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 249 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 250 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 307 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 308 LSRQIASLGIYPAVDPLESTSRQLDPLVVGEEHYNVARGVQTTLQRYKELKDIIAILG 365 >gi|167768302|ref|ZP_02440355.1| hypothetical protein CLOSS21_02858 [Clostridium sp. SS2/1] gi|317497767|ref|ZP_07956080.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA] gi|167709826|gb|EDS20405.1| hypothetical protein CLOSS21_02858 [Clostridium sp. SS2/1] gi|291560278|emb|CBL39078.1| ATP synthase F1 subcomplex beta subunit [butyrate-producing bacterium SSC/2] gi|316894956|gb|EFV17125.1| ATP synthase F1 [Lachnospiraceae bacterium 5_1_63FAA] Length = 462 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/310 (30%), Positives = 163/310 (52%), Gaps = 9/310 (2%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N LG+ ID + + + + I + P ++ V + F+TGI+ Sbjct: 74 GPIKVPVGKQTLGRMFNVLGEAIDKGEPV-ESEEKWAIHREPPKFEDQSPVVEMFETGIK 132 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIE 207 VID+ P G +IG+F G+G+GK+ L+ + + I + VGER RE + Sbjct: 133 VIDLLAPYAKGGKIGLFGGAGVGKTVLIQELIHNIATEHGGYSIFTGVGERSREGNDLWN 192 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + +K + +V +E P R T +T+AEYF + NVLL +D+I R+ + Sbjct: 193 EMTESGVIKNTALVFGQMNEPPGSRMRVAQTGLTMAEYFRDQEKQNVLLFIDNIFRYVQA 252 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP Sbjct: 253 GSEVSALLGRMPSAVGYQPTLANEVGALQERI--TSTKNGSITSVQAVYVPADDLTDPAP 310 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R+++E+G YP VDPL S SR+ + +E ++ + + R++ Sbjct: 311 ATTFAHLDATTVLSRAISEQGIYPAVDPLESSSRILEPDIVGEEHYEVARRVEEALQRYK 370 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 371 ELQDIIAILG 380 >gi|258593696|emb|CBE70037.1| ATP synthase subunit beta, membrane-bound, F1 sector [NC10 bacterium 'Dutch sediment'] Length = 473 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 164/302 (54%), Gaps = 11/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N +G+P+D + + + + PA + Q + + +TGI+VID+ P Sbjct: 91 AALGRIMNVIGEPVDKQGPIDAKN--HYPIHRPAPAFDEQATKVEILETGIKVIDLLEPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G + G+F G+G+GK+ ++ R+ + +S+ VGER RE + ++E + Sbjct: 149 TKGGKTGLFGGAGVGKTVVIMELIRNIAMEHGGLSVFAGVGERTREGNDLWLEMKESGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 +K+ ++ E P R LT +T+AEYF + +VLL +D+I RF + E++ Sbjct: 209 EKTALIYGQMTEPPGSRLRVALTGLTVAEYFRDEEKQDVLLFVDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + + G+IT+V ++ V D+ DP + + LD Sbjct: 269 GRMPSAVGYQPTLGTEMGELQERI--TSTKTGSITSVQAIYVPADDITDPAPAAAFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 VL+R L E G YP VDPLAS SR+ D +E V+ S+ ++ R+++ +DI I Sbjct: 327 ATTVLSRQLTELGIYPAVDPLASTSRILDPRVVGEEHYAVARSIQKILQRYKDLQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|237809867|ref|YP_002894307.1| F0F1 ATP synthase subunit beta [Tolumonas auensis DSM 9187] gi|259585455|sp|C4LDW0|ATPB_TOLAT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|237502128|gb|ACQ94721.1| ATP synthase F1, beta subunit [Tolumonas auensis DSM 9187] Length = 462 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+P+D +G D + I + P ++ + +TGI+VID+ P G Sbjct: 88 GRIMNVLGEPVDEQGPIGAED-NWVIHREAPSYEDQSSATELLETGIKVIDLICPFAKGG 146 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 147 KVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKESNVLDKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 206 AMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 265 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD + Sbjct: 266 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVT 323 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E + + ++ R++E +DI I G Sbjct: 324 LSRQIAALGIYPAVDPLDSTSRQLDPLVVGQEHYETARGVQTVLQRYKELKDIIAILG 381 >gi|34536479|dbj|BAC87673.1| beta subunit of ATP synthase [Chlamydomonas chlorococcoides] Length = 376 Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 105/313 (33%), Positives = 161/313 (51%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + S+ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAEASLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY S+ SE+ +L ERI + + G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPSLSSEMGQLQERI--TSTKDGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK S+ + + Sbjct: 262 APSVTFAHLDATTVLSRGLASKGIYPAVDPLESTSTML-QPWIVGEKHYESAQNVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 321 RYKELQDIIAILG 333 >gi|171920630|ref|ZP_02931872.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|185178799|ref|ZP_02964594.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024161|ref|ZP_02996887.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518551|ref|ZP_03004012.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524101|ref|ZP_03004181.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867714|ref|ZP_03079715.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273365|ref|ZP_03205901.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554411|ref|YP_002284551.1| F0F1 ATP synthase subunit beta [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550610|ref|ZP_03771559.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551120|ref|ZP_03772066.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|226740688|sp|B5ZAW1|ATPB_UREU1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|171903354|gb|EDT49643.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|184209422|gb|EDU06465.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018792|gb|EDU56832.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997947|gb|EDU67044.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660096|gb|EDX53476.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660569|gb|EDX53825.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249885|gb|EDY74665.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541912|gb|ACI60141.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378935|gb|EEH01300.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379764|gb|EEH02126.1| ATP synthase F1, beta subunit [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 464 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 154/300 (51%), Gaps = 12/300 (4%) Query: 102 CGRVINALGKPIDGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N G PID + GK M I P + + +TGI+V+D+ P Sbjct: 88 LGRMFNVTGDPIDEQPAPTGK---RMPIHRPAPSFAEQAEAIEILETGIKVVDLLVPFAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E D L K Sbjct: 145 GGKIGLFGGAGVGKTVLMQELIHNIAKNHGGLSVFAGVGERTREGNDLYYEMAESDVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AE F G +VLL +D+I RF + E++ G Sbjct: 205 TALVFGQMNEPPGARMRVALSGLTMAEEFRDAFGQDVLLFIDNIFRFTQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + S LD Sbjct: 265 MPSAVGYQPTLAFEMGQLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAK 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R++A G YP + PL S SRL D + + ++ RF E +DI I G Sbjct: 323 VVLDRAIASLGLYPAISPLQSTSRLLDPLVVGVKHYSVARRVIEILQRFMELQDIIAILG 382 >gi|320409255|gb|ADW27219.1| ATP synthase beta subunit [Tubulanus polymorphus] Length = 363 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/285 (33%), Positives = 153/285 (53%), Gaps = 16/285 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID +G S I ++ P ++ ++ +TGI+V+D+ P G Sbjct: 31 LGRIMNVIGEPIDERGPIG-AKTSAAIHAEAPEFVDMSVEQEILETGIKVVDMLAPYAKG 89 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISL 148 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 149 KDKSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 208 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 209 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 266 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 + LD VL+R +AE G YP VDPL S SR+ D +E ++ Sbjct: 267 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGEEHYTIA 311 >gi|320407255|gb|ADW27403.1| ATP synthase beta subunit [Owenia fusiformis] Length = 369 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G PID + + + I ++ P + ++ TGI+VI Sbjct: 54 IRIPVGPETLGRIMNVIGDPIDERGPI-ESNAFASIHAEAPEFVEMSLEQEILLTGIKVI 112 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 113 DMLAPYVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 171 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 172 MIEGGVISLKDKTSKVSLVYGQMNEPPAXRARVALTGLTVAEYFRDVEGQDVLLFIDNIF 231 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 232 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TSTKKGSITSVQAIYVPADDL 289 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD + VL+R +AE G YP VDPL S SR+ D A+ ++ + + Sbjct: 290 TDPAPATTFAHLDANTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGAEHYEIARGVQKI 349 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 350 LQNYKSLQDIIAILG 364 >gi|271502665|ref|YP_003335691.1| ATP synthase F1 subunit beta [Dickeya dadantii Ech586] gi|270346220|gb|ACZ78985.1| ATP synthase F1, beta subunit [Dickeya dadantii Ech586] Length = 460 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 156/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P + ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEDLSNSQELLETGIKVIDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|27904521|ref|NP_777647.1| F0F1 ATP synthase subunit beta [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|32171341|sp|Q89B39|ATPB_BUCBP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|27903918|gb|AAO26752.1| ATP synthase beta chain [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 465 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 13/311 (4%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGI 149 ++ GR++N LG+PID L D S EI K P + + +TGI Sbjct: 77 KVPVGTATLGRIVNVLGQPIDMKGPLKNHDNSDIEYWEIHRKAPSYSEQLTSYEVLETGI 136 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFI 206 +VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE +F Sbjct: 137 KVIDLICPFSKGGKVGLFGGAGVGKTVNMMELIRNIATEHSGYSVFTGVGERTREGNDFY 196 Query: 207 EDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264 + + D+ L K +V +E P R T +TIAE F ++G +VLL +D+I R+ Sbjct: 197 HE-MSDSRVLDKVSLVYGQMNEPPGNRLRVAFTGLTIAEKFRNEGHDVLLFIDNIYRYTL 255 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ E+ L ERI + KG+IT++ +V V D+ DP Sbjct: 256 AGTEVSALLGRIPSAVGYQPTLSEEMGVLQERI--TSTNKGSITSIQAVYVPADDLTDPS 313 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383 + S LD I L+R + G YP +DPL S SR D V+ + ++ R+ Sbjct: 314 PATTFSHLDSTITLSRQIVSLGIYPAIDPLNSTSRQLDPRIVGQLHYDVALGVRSILQRY 373 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 374 QELKDIIAILG 384 >gi|262376922|ref|ZP_06070149.1| ATP synthase F1, beta subunit [Acinetobacter lwoffii SH145] gi|262308267|gb|EEY89403.1| ATP synthase F1, beta subunit [Acinetobacter lwoffii SH145] Length = 464 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 159/307 (51%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + + I P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDEAGPVAT-EARLPIHRSAPSYAEQAASTDLLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD +VL+R +A G YP +DPL S SR D E ++ S+ +++ R++E + Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELK 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|113972252|ref|YP_736045.1| F0F1 ATP synthase subunit beta [Shewanella sp. MR-4] gi|123029180|sp|Q0HD79|ATPB_SHESM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|113886936|gb|ABI40988.1| ATP synthase F1, beta subunit [Shewanella sp. MR-4] Length = 463 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 159/301 (52%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID ++G+ + + I P ++ + +TGI+VID+ P Sbjct: 85 ATLGRIMNVLGEPIDEAGAIGEEERYV-IHRSAPSYEDQSNTTELLETGIKVIDLVCPFA 143 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + L Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380 Query: 394 G 394 G Sbjct: 381 G 381 >gi|195442758|ref|XP_002069113.1| GK24170 [Drosophila willistoni] gi|194165198|gb|EDW80099.1| GK24170 [Drosophila willistoni] Length = 685 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 107/314 (34%), Positives = 160/314 (50%), Gaps = 17/314 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ GR++N +G PIDG + K D I + P + ++ TGI+VID Sbjct: 192 RVPVGKAVLGRILNVVGDPIDGRGEV-KSDFYSFIHNDAPELEDLSVKQEMLVTGIKVID 250 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205 + P G +IG+F G+G+GK+ L+ + A+S V + GER RE E Sbjct: 251 LLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHEM 309 Query: 206 IEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261 IE + D+ K +V +E P R LT +TIAEYF G +VLL +D+I R Sbjct: 310 IESKVISIDDDSSKVSLVFGQMNEPPGARSRIVLTGLTIAEYFRDIDGQDVLLFIDNIFR 369 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + G+IT+V +V V D+ Sbjct: 370 FTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDLT 427 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LI 380 DP + S LD VL+R +AE G YP VDPL SVSR+ D +E V+ L + Sbjct: 428 DPAPSATFSHLDATTVLSRQIAELGIYPSVDPLDSVSRILDPEIVGEEHYNVARLVQKTL 487 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 488 QSYKSLQDIIAILG 501 >gi|313884726|ref|ZP_07818482.1| ATP synthase F1, beta subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312620094|gb|EFR31527.1| ATP synthase F1, beta subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 498 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 18/312 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSME-----IMSKVPPAMNRQRVEKGFKTG 148 ++ GRV N LG ID KGDL + I P N + +TG Sbjct: 91 KVPAGPATLGRVFNVLGHTIDD-----KGDLEADYELKSIYRDAPKYENLSSEYEILETG 145 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREF 205 I+VID+ P G +IG+F G+G+GK+ L+ + D + + + VGER RE + Sbjct: 146 IKVIDLLAPYLKGGKIGLFGGAGVGKTVLIQELIHNIAQELDGISVFTGVGERTREGNDL 205 Query: 206 IEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFA 263 + + + KK+ +V +E P R LT +T+AEYF K +VLL +D+I RF Sbjct: 206 VFEMRDSGVDKKTAMVFGQMNEPPGARMRTVLTGLTMAEYFRDKMKQDVLLFVDNIFRFT 265 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ SE+ + ERI + E G+IT++ +V V D++ DP Sbjct: 266 QAGSEVSALLGRMPSAVGYQPTLASEMGAMQERIAST--EDGSITSIQAVYVPADDYTDP 323 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHR 382 + + LD L+R L E+G YP V+PL S S L+++ ++ + + R Sbjct: 324 APATTFTHLDATTNLDRKLTEQGIYPAVNPLESTSVALSEEIVGPRHYRIARQVQTTLQR 383 Query: 383 FEETRDIRLIGG 394 + E +DI I G Sbjct: 384 YHELQDIIAILG 395 >gi|213401038|gb|ACJ47167.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Nasonia vitripennis] Length = 309 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG ++E + + PP+ QR+ E+ TGI+VID+ P G Sbjct: 18 GRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKG 76 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 77 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 134 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 194 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 195 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 252 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 S LD VL+R +AE G YP VDPL S S+ +E V+S Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVAS 300 >gi|322492414|emb|CBZ27688.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103] Length = 499 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 144/271 (53%), Gaps = 15/271 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID +G+ + M I ++ P ++ + TGI+VID+ P C G Sbjct: 122 GRIFNVLGDAIDQRGPVGE-KMRMAIHAEAPKLADQAAEDTILTTGIKVIDLILPYCKGG 180 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L++ A+ V VGER RE + + + + Sbjct: 181 KIGLFGGAGVGKTVIIMELINNVAKGHGGFSVFAG-VGERTREGTDLYLEMMQSKVIDLK 239 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K V+V +E P R +A+T+AEYF +G NVLL +D+I RF + E++ Sbjct: 240 GESKCVLVYGQMNEPPGARARVAQSALTMAEYFRDVEGQNVLLFIDNIFRFTQANSEVSA 299 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +L L ERI + KG+IT+V +V V D+ DP + S Sbjct: 300 LLGRIPAAVGYQPTLAEDLGMLQERI--TSTTKGSITSVQAVYVPADDITDPAPATTFSH 357 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 LD VL+R++AE G YP V+PL SR+ D Sbjct: 358 LDATTVLDRAVAESGIYPAVNPLECASRIMD 388 >gi|38906111|gb|AAR27808.1| ATP synthase beta chain [Bifidobacterium animalis subsp. lactis DSM 10140] Length = 373 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 95/269 (35%), Positives = 149/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A G YP VDPLAS SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLASTSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326 >gi|320449957|ref|YP_004202053.1| V-type ATP synthase subunit beta [Thermus scotoductus SA-01] gi|320150126|gb|ADW21504.1| V-type ATP synthase, beta chain [Thermus scotoductus SA-01] Length = 478 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 164/316 (51%), Gaps = 22/316 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ S GR N +GKPIDG + + + I+ + R++ E+ +TGI ID Sbjct: 81 RLGVSKEMLGRRFNGIGKPIDGLPPITP-EKRLPIVGLPLNPVARRKPEEFIQTGISTID 139 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGR 200 + L GQ++ +F+GSG+ + + + AR V+ + +G R Sbjct: 140 VMNTLVRGQKLPIFSGSGLPANEIAAQIARQATVRPDLSGEGEKEEPFAVVFAAMGITQR 199 Query: 201 EVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258 E+ FI+++ L +SV+ + +D+ I R + P A+T+AEY + + D +VL+IL Sbjct: 200 ELSYFIQEFERTGALSRSVLFLNKADDPTIERILTPRMALTVAEYLAFEHDYHVLVILTD 259 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 +T + ++REI + E+P RGYP ++++L + ER G +KG++T + + + D Sbjct: 260 MTNYCEALREIGASREEIPGRRGYPGYMYTDLATIYERAGVVVGKKGSVTQIPILSMPDD 319 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVS 374 + PI D I +G I L+R L +G YPP+DPL S+SRL + K + ++ K VS Sbjct: 320 DRTHPIPDLTGYITEGQIQLSRELHRKGIYPPIDPLPSLSRLMNNGVGKGKTREDHKQVS 379 Query: 375 SLTHLIHRFEETRDIR 390 L + DIR Sbjct: 380 D--QLYSAYANGVDIR 393 >gi|238899337|ref|YP_002925020.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229467098|gb|ACQ68872.1| membrane-bound ATP synthase, F1 sector, alpha-subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 460 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG PID +G+ + I + P ++ +TGI+V+D+ P G Sbjct: 85 LGRIMNVLGDPIDMKGPIGEQE-RWSIHRQPPSYEELANSQELLETGIKVMDLICPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + L K Sbjct: 144 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESGVLDKV 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 204 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 263 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +KG+IT+V +V V D+ DP + + LD V Sbjct: 264 SAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATAV 321 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 322 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|82889056|gb|ABB92851.1| ATP synthase F1 beta subunit [Wolbachia pipientis] gi|82889058|gb|ABB92852.1| ATP synthase F1 beta subunit [Wolbachia pipientis] gi|82889060|gb|ABB92853.1| ATP synthase F1 beta subunit [Wolbachia pipientis] Length = 310 Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG ++E + + PP+ QR+ E+ TGI+VID+ P G Sbjct: 18 GRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKG 76 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 77 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 134 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 194 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 195 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 252 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 S LD VL+R +AE G YP VDPL S S+ +E V+S Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVAS 300 >gi|134102716|ref|YP_001108377.1| F0F1 ATP synthase subunit beta [Saccharopolyspora erythraea NRRL 2338] gi|291007827|ref|ZP_06565800.1| F0F1 ATP synthase subunit beta [Saccharopolyspora erythraea NRRL 2338] gi|133915339|emb|CAM05452.1| ATP synthase beta chain [Saccharopolyspora erythraea NRRL 2338] Length = 455 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 158/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + G I K P + + +TGI+VID+ TP G Sbjct: 77 GHVFNALGHCLD-EPGYGSDAERWTIHRKAPSFDQLEGKTEMLETGIKVIDLLTPYVQGG 135 Query: 163 RIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ R + + + VGER RE + ++E L + Sbjct: 136 KIGLFGGAGVGKTVLIQEMIRRVAKNFGGTSVFAGVGERTREGNDLWVEMAESGVLADTA 195 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + +E++T G +P Sbjct: 196 LVFGQMDEPPGTRMRVALSALTMAEYFRDVQQQDVLLFIDNIFRFTQAGQEVSTLLGRMP 255 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 256 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 313 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++++G YP VDPLAS S + D A +E ++ + ++ +++E +DI I G Sbjct: 314 LSRPISQKGIYPAVDPLASSSTILDPAIVGEEHYRVAQEVKRILQKYKELQDIIAILG 371 >gi|114049501|ref|YP_740051.1| F0F1 ATP synthase subunit beta [Shewanella sp. MR-7] gi|123030131|sp|Q0HPG1|ATPB_SHESR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|113890943|gb|ABI44994.1| ATP synthase F1, beta subunit [Shewanella sp. MR-7] Length = 463 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 159/301 (52%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID ++G+ + + I P ++ + +TGI+VID+ P Sbjct: 85 ATLGRIMNVLGEPIDEAGAIGEEERYV-IHRSAPSYEDQSNTTELLETGIKVIDLVCPFA 143 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + L Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380 Query: 394 G 394 G Sbjct: 381 G 381 >gi|284928846|ref|YP_003421368.1| ATP synthase F1 subcomplex subunit beta [cyanobacterium UCYN-A] gi|284809305|gb|ADB95010.1| ATP synthase F1 subcomplex beta subunit [cyanobacterium UCYN-A] Length = 482 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D +G + S I P + + + F+TGI+VID+ TP G Sbjct: 97 LGRIFNVLGEPVDQRGEVGNKEFS-PIHRPAPKLTDLETKPQVFETGIKVIDLLTPYRQG 155 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL------GD 212 +IG+F G+G+GK+ ++ + +S+ VGER RE + + + + Sbjct: 156 GKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMMESGVINSE 215 Query: 213 NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL S +V +E P R L+A+T+AEYF +VLL +D+I RF + E+ Sbjct: 216 NLNDSKIALVYGQMNEPPGARMRVALSALTMAEYFRDVNKQDVLLFVDNIFRFVQAGAEV 275 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 276 SALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 333 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LDG VL+R+LA +G YP VDPL S S + E ++ + R++E +D Sbjct: 334 AHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPNIVGQEHYDTARAVQSTLQRYKELQD 393 Query: 389 IRLIGG 394 I I G Sbjct: 394 IIAILG 399 >gi|269794331|ref|YP_003313786.1| ATP synthase, F1 subunit beta [Sanguibacter keddieii DSM 10542] gi|269096516|gb|ACZ20952.1| ATP synthase, F1 beta subunit [Sanguibacter keddieii DSM 10542] Length = 493 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 91/273 (33%), Positives = 153/273 (56%), Gaps = 9/273 (3%) Query: 129 MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSD 185 + + PPA ++ + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ ++ ++ Sbjct: 136 IHRKPPAFDQLESKTAMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIYRVAN 195 Query: 186 CFDKV-IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + V + + VGER RE + IE+ +K++ +V DE P R L+A+T+AE Sbjct: 196 NHNGVSVFAGVGERTREGNDLIEEMTESGVIKQTALVFGQMDEPPGTRLRVALSALTMAE 255 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ +L ERI + Sbjct: 256 YFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TST 313 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A G YP VDPLAS SR+ D Sbjct: 314 RGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAVDPLASSSRILD 373 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + + + ++ R +E +DI I G Sbjct: 374 PRYVGQAHYDTATRVKQILQRNKELQDIIAILG 406 >gi|115522308|ref|YP_779219.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris BisA53] gi|122297999|sp|Q07UZ5|ATPB_RHOP5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|115516255|gb|ABJ04239.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris BisA53] Length = 476 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + L I ++ P ++ + TGI+V+D+ P G Sbjct: 90 GRIMNVIGEPVDEQGPVANEGLR-PIHAEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211 +IG+F G+G+GK+ L+ + + + VGER RE EFIE + G Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R L+ +T+AE+F +G +VL +D+I RF + E++ Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSA 268 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + + Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSITSVQAIYVPADDLTDPAPATSFAH 326 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIR 390 LD VLNR+++E+G YP VDPL S SR+ +E + + ++ +++ +DI Sbjct: 327 LDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARMVQQVLQKYKSLQDII 386 Query: 391 LIGG 394 I G Sbjct: 387 AILG 390 >gi|91786238|ref|YP_547190.1| F0F1 ATP synthase subunit beta [Polaromonas sp. JS666] gi|123060395|sp|Q12GQ0|ATPB_POLSJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|91695463|gb|ABE42292.1| ATP synthase F1 subcomplex beta subunit [Polaromonas sp. JS666] Length = 467 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 108/340 (31%), Positives = 170/340 (50%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 IV +G + + G+ V++ G P GR+++ LG PID + + L+ Sbjct: 51 IVRTIALGTSDGLRRGNTVYNTGANITVPVGKATLGRIMDVLGAPIDERGPVDQ-TLTAP 109 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAP 235 + V VGER RE +F + +NL +S V V +E P R Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVA 228 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT +TIAE F +G +VL +D+I R+ + E++ G +P A GY ++ E+ RL E Sbjct: 229 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 288 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL Sbjct: 289 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 346 Query: 356 SVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 S SR D D ++ + R++E RDI I G Sbjct: 347 STSRQLDPNVVGEDHYATARAVQGTLQRYKELRDIIAILG 386 >gi|313625648|gb|EFR95323.1| ATP synthase F1, beta subunit [Listeria innocua FSL J1-023] Length = 456 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 121/406 (29%), Positives = 199/406 (49%), Gaps = 24/406 (5%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN I + IGE L G V + G + G Sbjct: 33 EYHTHQGTYLAEVVQHTGINT----ISAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG L ++ I + P + ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGKPELA-AEVKWPIFREQPLLRDLDTSKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFD--KVIISLVGERGRE-VREFIEDYLGDNLKKSVVV 220 G+F G+G+GKS L+ + + + VGER RE + + E L ++ VV Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMQGGNSVFTGVGERVREGIGLYKELEASGVLPQTTVV 207 Query: 221 VATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 + +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G++P+ Sbjct: 208 LGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKIPIT 267 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD IVL Sbjct: 268 GGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDSTIVLE 325 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYRPG 398 RS+A G +P V+PL S SR + + + +L + ++ R+ E ++I + G Sbjct: 326 RSIAALGIFPAVNPLQSFSRALNPTFVGERHYELAVQVKFILQRYMELQEIINVLGM--- 382 Query: 399 VDLILD--KAVHQVPIIYDFLKQ----SPSDLSSEDVFQEITKKLQ 438 +L D K VH+ I +FL Q S +E F EI L+ Sbjct: 383 AELSEDDRKLVHRARKIRNFLSQPFYVSEKFTGTEGTFVEIEDLLE 428 >gi|118471849|ref|YP_889188.1| F0F1 ATP synthase subunit beta [Mycobacterium smegmatis str. MC2 155] gi|190358683|sp|A0R200|ATPB_MYCS2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118173136|gb|ABK74032.1| ATP synthase F1, beta subunit [Mycobacterium smegmatis str. MC2 155] Length = 475 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 164/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN--RQRVEKGFKTGIRVIDIFTPLCH 160 G V NALG +D D GK D + + PPA + R E +TG++V+D+ TP Sbjct: 96 GHVFNALGDCLD-DPGYGK-DFEHWSIHRKPPAFSDLEPRTEM-LETGLKVVDLLTPYVR 152 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 G +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK Sbjct: 153 GGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKD 212 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AE+F +G +VLL +D+I RF + E++T G Sbjct: 213 TALVFGQMDEPPGTRMRVALSALTMAEFFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLGR 272 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 273 MPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDAT 330 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++ +G +P VDPLAS S + D A DE ++ + ++ R+++ +DI I G Sbjct: 331 TELSRAVFSKGIFPAVDPLASSSTILDPAIVGDEHYRVAQEVIRILQRYKDLQDIIAILG 390 >gi|184186105|ref|NP_001116974.1| ATP synthase beta subunit [Strongylocentrotus purpuratus] gi|115966189|ref|XP_001177551.1| PREDICTED: similar to H(+)-transporting ATPase beta subunit [Strongylocentrotus purpuratus] Length = 523 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/272 (35%), Positives = 148/272 (54%), Gaps = 16/272 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID +G D I ++ P + ++ TGI+V+D+ P G Sbjct: 137 GRIINVIGEPIDERGPIGT-DKRSAIHAEAPAFVEMSVNQEILVTGIKVVDLLAPYAKGG 195 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 196 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISLK 254 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 255 DDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 314 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 315 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 372 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 LD VL+R +AE G YP VDPL S SR+ D Sbjct: 373 HLDATTVLSRGIAELGIYPAVDPLDSSSRIMD 404 >gi|294143106|ref|YP_003559084.1| ATP synthase F1 subunit beta [Shewanella violacea DSS12] gi|293329575|dbj|BAJ04306.1| ATP synthase F1, beta subunit [Shewanella violacea DSS12] Length = 458 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 10/302 (3%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 + GR++N LG+PID +G D + I + P ++ + +TGI+VID+ P Sbjct: 80 SVTLGRIMNVLGEPIDEAGPIGGTDHYV-IHREAPTFEDQSSSTELLETGIKVIDLICPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDAGV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKDVLFFVDNIYRYTLAGTEVSALL 257 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 258 GRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLD 315 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 IVL+R++A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 316 ATIVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAI 375 Query: 393 GG 394 G Sbjct: 376 LG 377 >gi|284520625|gb|ADB92921.1| ATP synthase beta chain [Bifidobacterium animalis subsp. lactis BB-12] Length = 397 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 95/269 (35%), Positives = 149/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 64 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 123 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 124 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 183 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 184 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 241 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A G YP VDPLAS SR+ D + Sbjct: 242 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLASTSRILDPRYV 301 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 302 GQAHYDCANRVKAILQRNKELQDIIALIG 330 >gi|326387627|ref|ZP_08209233.1| F0F1 ATP synthase subunit beta [Novosphingobium nitrogenifigens DSM 19370] gi|326207673|gb|EGD58484.1| F0F1 ATP synthase subunit beta [Novosphingobium nitrogenifigens DSM 19370] Length = 478 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 152/293 (51%), Gaps = 8/293 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ G D L I PP + F TGI+VID+ TPL G Sbjct: 97 GRLLDVTGTVGDHGADLPGDTPRWPIHRAAPPLSAQTGTSDLFMTGIKVIDLLTPLAQGG 156 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 + +F G+G+GK+ L+ + A +D + + + VGER RE E + D G L ++V Sbjct: 157 KAAMFGGAGVGKTVLVMELIHAMVAGYDGISVFAGVGERSREGHEMLLDMRGSGVLDRTV 216 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R P++A+TIAE+F + NVLL++D++ RF + E++ G LP Sbjct: 217 LVYGQMNEPPGARWRVPMSALTIAEWFRDEARRNVLLLMDNVFRFVQAGAEVSGLLGRLP 276 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ SE+ L ERI + ++TA+ +V V D+ DP ++ + D +V Sbjct: 277 SRVGYQPTLASEVAALEERI--ASVGGASVTAIQAVYVPADDFTDPAVTTIAAHADSMVV 334 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 L+R++A EG YP VDP+AS S L D +E + + I + E D+ Sbjct: 335 LSRAMAAEGIYPAVDPIASSSVLLDPLVVGEEHATTALEVRRAIEHYRELEDV 387 >gi|295109103|emb|CBL23056.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus obeum A2-162] Length = 464 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LG+P+D + + I P + + +TGI+V+D+ P G Sbjct: 89 GRVFNLLGEPVD-NQPAPEAKERWSIHRPAPSYEEQMPATEILETGIKVVDLICPYAKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + K+ Sbjct: 148 KIGLFGGAGVGKTVLIMELIHNVATAHGGLSVFTGVGERTREGNDLYNEMKESGVIDKTA 207 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ G +P Sbjct: 208 LVYGQMNEPPGARMRVGLSGLTMAEYFRDEKNQDVLLFIDNIFRFTQAGSEVSALLGRMP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + S LD V Sbjct: 268 SAVGYQPTLATEMGNLQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++ +G YP VDPL S SR L+ + + ++ S+ ++ R++E +DI I G Sbjct: 326 LSREISSQGIYPAVDPLDSTSRILSPEIVGTEHYEIARSVQRVLQRYKELQDIIAIMG 383 >gi|312194822|ref|YP_004014883.1| ATP synthase F1 subunit beta [Frankia sp. EuI1c] gi|311226158|gb|ADP79013.1| ATP synthase F1, beta subunit [Frankia sp. EuI1c] Length = 479 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V N LG+P+D + + + I PP + + F+TGI+VID+ P G Sbjct: 105 GHVFNVLGRPLDVESV--DAETTWAIHRSAPPFDQLESKTEMFETGIKVIDLLAPYVRGG 162 Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYL-GDNLKKSV 218 +IG+F G+G+GK+ ++ R + F V + + VGER RE + E+ ++ + Sbjct: 163 KIGLFGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFEEMTEAGVIEDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L A+T+AEYF K +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRLRVALAALTMAEYFRDVKKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 283 SAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDAQTV 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++++ G YP V PL S SR+ D + E + ++ R+++ +DI I G Sbjct: 341 LDRAISDLGIYPAVSPLESTSRILDARYVGQEHYDTAREVQRILQRYKDLQDIIAILG 398 >gi|261338636|ref|ZP_05966520.1| ATP synthase F1, beta subunit [Bifidobacterium gallicum DSM 20093] gi|270276355|gb|EFA22209.1| ATP synthase F1, beta subunit [Bifidobacterium gallicum DSM 20093] Length = 497 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 151/269 (56%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 144 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 203 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 204 VSVFAGVGERTREGNDLIGEMEEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 263 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 264 VENQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERITSTRGH--S 321 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 322 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 381 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 382 GQAHYECANRVKAILQRNKELQDIIALIG 410 >gi|167856121|ref|ZP_02478862.1| F0F1 ATP synthase subunit beta [Haemophilus parasuis 29755] gi|167852762|gb|EDS24035.1| F0F1 ATP synthase subunit beta [Haemophilus parasuis 29755] Length = 457 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P ++ + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEDQANSTELLETGIKVIDLIAPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQKTLQRYKELKDIIAILG 376 >gi|311281703|ref|YP_003943934.1| ATP synthase F1, beta subunit [Enterobacter cloacae SCF1] gi|308750898|gb|ADO50650.1| ATP synthase F1, beta subunit [Enterobacter cloacae SCF1] Length = 460 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+V+D+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVMDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|259046359|ref|ZP_05736760.1| ATP synthase F1 sector subunit beta [Granulicatella adiacens ATCC 49175] gi|259036996|gb|EEW38251.1| ATP synthase F1 sector subunit beta [Granulicatella adiacens ATCC 49175] Length = 474 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 152/299 (50%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + EI P + +TGI+VID+ P G Sbjct: 91 LGRVFNVLGDTIDLKEPFPEDFTRHEIHKPAPKFEELNSQYEILQTGIKVIDLLAPYLKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLK-KS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + K+ Sbjct: 151 GKIGLFGGAGVGKTVLIQELIHNIAEELGGISVFTGVGERTREGNDLYHEMQESGVSAKT 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAEYF + +VLL +D+I RF + E++ G + Sbjct: 211 AMVFGQMNEPPGARMRVALTGLTIAEYFRDMEKQDVLLFIDNIYRFTQAGSEVSALLGRM 270 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI S + G+IT++ ++ V D++ DP + + LD Sbjct: 271 PSAVGYQPTLATEMGQLQERI--SSTKDGSITSIQAIYVPADDYTDPAPATTFAHLDATT 328 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S L + + ++ + ++ R+ E +DI I G Sbjct: 329 NLERRLTEQGIYPAVDPLASTSSALTPEIVGEEHYEVAMKVQQMLQRYRELQDIIAILG 387 >gi|213401036|gb|ACJ47166.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Nasonia longicornis] Length = 316 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/288 (33%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG ++E + + PP+ QR+ E+ TGI+VID+ P G Sbjct: 25 GRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVIDLLAPYLKG 83 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 84 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 141 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 142 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 201 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 202 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 259 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 S LD VL+R +AE G YP VDPL S S+ +E V+S Sbjct: 260 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVAS 307 >gi|254361677|ref|ZP_04977814.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Mannheimia haemolytica PHL213] gi|153093199|gb|EDN74210.1| H(+)-transporting two-sector ATPase, F(1) beta subunit [Mannheimia haemolytica PHL213] Length = 457 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQANSTELLETGIKVIDLVAPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376 >gi|223585573|gb|ACM91676.1| F1F0-ATP synthase beta subunit [Marsupenaeus japonicus] Length = 525 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 162/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + S I ++ P + ++ TGI+V+D+ P G Sbjct: 138 LGRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEMSVEQEILVTGIKVVDLLAPYSKG 196 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 197 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVISL 255 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RFA + E+ Sbjct: 256 KDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFAQAGSEV 315 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 316 SALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 373 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S+SR+ D E V+ S+ ++ + +D Sbjct: 374 AHLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIGHEHYNVARSVQKILQDHKSLQD 433 Query: 389 IRLIGG 394 I I G Sbjct: 434 IIAILG 439 >gi|91975039|ref|YP_567698.1| F0F1 ATP synthase subunit beta [Rhodopseudomonas palustris BisB5] gi|123749423|sp|Q13DP2|ATPB_RHOPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|91681495|gb|ABE37797.1| ATP synthase F1, beta subunit [Rhodopseudomonas palustris BisB5] Length = 476 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 93/304 (30%), Positives = 158/304 (51%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + L I ++ P ++ + TGI+V+D+ P G Sbjct: 90 GRIMNVIGEPVDEQGPVANEGLR-PIHAEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211 +IG+F G+G+GK+ L+ + + + VGER RE EFIE + G Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R L+ +T+AE+F +G +VL +D+I RF + E++ Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSA 268 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + + Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTHKGSITSVQAIYVPADDLTDPAPATSFAH 326 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIR 390 LD VLNR+++E+G YP VDPL S SR+ +E + + ++ +++ +DI Sbjct: 327 LDATTVLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARMVQQVLQKYKSLQDII 386 Query: 391 LIGG 394 I G Sbjct: 387 AILG 390 >gi|330815046|ref|YP_004358751.1| ATP synthase F1, beta subunit [Burkholderia gladioli BSR3] gi|327367439|gb|AEA58795.1| ATP synthase F1, beta subunit [Burkholderia gladioli BSR3] Length = 464 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + L I K P + +TGI+VID+ P G Sbjct: 89 GRIMDVLGRPIDEAGPIESEHLR-SIHQKAPAFDELSPSTELLETGIKVIDLVCPFAKGG 147 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 148 KVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAG-VGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ G +P Sbjct: 207 ALVYGQMNEPPGNRLRVALTGLTMAEHFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D+ DP + LD +V Sbjct: 267 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFGHLDATVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E ++ + + R++E RDI I G Sbjct: 325 LSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYTITRGVQQTLQRYKELRDIIAILG 382 >gi|290957352|ref|YP_003488534.1| ATP synthase subunit beta [Streptomyces scabiei 87.22] gi|260646878|emb|CBG69975.1| ATP synthase beta chain [Streptomyces scabiei 87.22] Length = 478 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 102/327 (31%), Positives = 177/327 (54%), Gaps = 17/327 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ +D+ +G+ I K P + + F+TG++VID+ TP G Sbjct: 101 GKVFNTLGEVLNSEDTY-EGE-RWGIHRKAPNFDELESKTEMFETGVKVIDLLTPYVKGG 158 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + IE+ + K+ Sbjct: 159 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEEMSESGVIDKTA 218 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 219 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 278 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 279 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 336 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R ++E+G YP VDPL S SR+ D + +AD + ++ ++++ +DI I Sbjct: 337 LSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYNTAMRVKTVLQKYKDLQDIIAI---- 392 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 393 LGIDELGEEDKLTVHRARRVERFLSQN 419 >gi|148642494|ref|YP_001273007.1| V-type ATP synthase subunit B [Methanobrevibacter smithii ATCC 35061] gi|222446007|ref|ZP_03608522.1| hypothetical protein METSMIALI_01655 [Methanobrevibacter smithii DSM 2375] gi|261349454|ref|ZP_05974871.1| V-type sodium ATPase, B subunit [Methanobrevibacter smithii DSM 2374] gi|167016633|sp|A5UKB1|VATB_METS3 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|148551511|gb|ABQ86639.1| vacuolar-type H+-transporting ATP synthase, subunit B [Methanobrevibacter smithii ATCC 35061] gi|222435572|gb|EEE42737.1| hypothetical protein METSMIALI_01655 [Methanobrevibacter smithii DSM 2375] gi|288861817|gb|EFC94115.1| V-type sodium ATPase, B subunit [Methanobrevibacter smithii DSM 2374] Length = 462 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 95/286 (33%), Positives = 151/286 (52%), Gaps = 9/286 (3%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 +I S GR+ N +GKPIDG + D ++I +R+ E+ +TGI ID Sbjct: 83 KIGVSRDMMGRMFNGIGKPIDGGPEIIP-DEELDINGSPMNPASREFPEEFIQTGISTID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIE 207 L GQ++ +F+GSG+ + L + AR D VI + +G E F+ Sbjct: 142 GMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLGDDAEFAVIFAAMGITHEEANFFMR 201 Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHS 265 D+ L+K V + +D+ I R + P A+T AEYF+ + G VL+IL +T + + Sbjct: 202 DFERTGALEKVTVFMNLADDPAIERILTPKMALTTAEYFAFTLGMQVLVILTDMTNYCEA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 +REI+ E+P RGYP ++++L + ER G + ++G+IT + +++ D+ PI Sbjct: 262 LREISAARDEVPGRRGYPGYMYTDLANIYERAGRIDGKEGSITQMPILVMPQDDITHPIP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 D I +G IVL+R L +G YPPVD L S+SRL D+ + Sbjct: 322 DLTGYITEGQIVLSRELNRKGIYPPVDVLPSLSRLMSGGIGGDKTR 367 >gi|89574037|gb|ABD77244.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Felis catus] Length = 418 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 54 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 112 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 113 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 171 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 172 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 231 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 232 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 289 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 290 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 349 Query: 389 IRLIGG 394 I I G Sbjct: 350 IIAILG 355 >gi|296453449|ref|YP_003660592.1| ATP synthase F1 subunit beta [Bifidobacterium longum subsp. longum JDM301] gi|296182880|gb|ADG99761.1| ATP synthase F1, beta subunit [Bifidobacterium longum subsp. longum JDM301] Length = 490 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 137 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 196 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 197 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 256 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 257 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 314 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 315 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 374 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 375 GQAHYDCANRVKAILQRNKELQDIIALIG 403 >gi|31544510|ref|NP_853088.1| F0F1 ATP synthase subunit beta [Mycoplasma gallisepticum str. R(low)] gi|461567|sp|P33253|ATPB_MYCGA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|44302|emb|CAA45551.1| adenosinetriphosphatase [Mycoplasma gallisepticum] gi|31541355|gb|AAP56656.1| ATP synthase F1 subunit beta [Mycoplasma gallisepticum str. R(low)] gi|284930564|gb|ADC30503.1| ATP synthase F1 subunit beta [Mycoplasma gallisepticum str. R(high)] Length = 471 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+PID + M I P ++ + F+TGI+VID+ P G Sbjct: 90 LGRMFNVIGEPIDEKKPIDASVKRMSIHRPAPSFADQSNELEIFETGIKVIDLLIPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + +S+ VGER RE + + E G + K+ Sbjct: 150 GKIGLFGGAGVGKTVLVQELIHNIATGHGGLSVFAGVGERTREGNDLYYEMIEGGVIDKT 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +VLL +D+I RF + E++ G + Sbjct: 210 ALVFGQMNEPPGARMRVALTGLTMAEYFRDVNNQDVLLFIDNIFRFTQAGSEVSALLGRM 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + + G+IT+V ++ V D+ DP + + LD Sbjct: 270 PSAVGYQPTLAEEMGSLQERI--TSTKSGSITSVQAIYVPADDLTDPAPSTTFTHLDAKT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G +P V+PL S SRL D + + + ++ +F E +DI I G Sbjct: 328 VLDRNIASLGIFPAVNPLDSTSRLLDPSVVGIQHYQTARKVQMILQKFLELQDIIAILG 386 >gi|170516897|gb|ACB15384.1| ATP synthase beta chain [Bifidobacterium longum] Length = 334 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 34 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 93 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 94 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 153 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 154 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGH--S 211 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 212 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 271 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 272 GQAHYDCANRVKAILQRNKELQDIIALIG 300 >gi|213691226|ref|YP_002321812.1| ATP synthase F1, beta subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|254808133|sp|B7GTZ3|ATPB_BIFLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|213522687|gb|ACJ51434.1| ATP synthase F1, beta subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457287|dbj|BAJ67908.1| ATP synthase beta subunit [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 490 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 137 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 196 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 197 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 256 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 257 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 314 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 315 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 374 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 375 GQAHYDCANRVKAILQRNKELQDIIALIG 403 >gi|254463430|ref|ZP_05076846.1| ATP synthase F1, beta subunit [Rhodobacterales bacterium HTCC2083] gi|206680019|gb|EDZ44506.1| ATP synthase F1, beta subunit [Rhodobacteraceae bacterium HTCC2083] Length = 474 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N G P+D + D I P + + TGI+VID+ P Sbjct: 84 ATLGRIMNVTGDPVDEQGPVA-ADARRPIHGDAPTFEQQSTATEILVTGIKVIDLLAPYT 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED-- 208 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGVSVFAGVGERTREGNDLYHEMIESGV 200 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + DNL S +V +E P R LT +T+AE F G +VL +D+I RF + Sbjct: 201 IVPDNLPDSKIALVYGQMNEPPGARMRVALTGLTLAEQFRDDTGTDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI S + G+IT+V +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--SSTKNGSITSVQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+RS++E+G YP VDPL S SRL D DE K+ + + ++ R++ Sbjct: 319 ATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPLIIGDEHYKVATDVQQVLQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|46909243|gb|AAT06139.1| ATP synthase beta subunit [Enallagma aspersum] Length = 347 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 160/315 (50%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI A GR+IN +G+PID + D I + P + ++ TGI+V+ Sbjct: 14 IRIPVGAETLGRIINVIGEPIDERGPITT-DKFAAIHADAPEFVEMSVEQEILVTGIKVV 72 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 73 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 131 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 132 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 191 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 192 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 249 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR D A+ + + Sbjct: 250 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRXMDPNIIGAEHYNVARGAQKI 309 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 310 LQDYKSLQDIIAILG 324 >gi|291543824|emb|CBL16933.1| ATP synthase F1 subcomplex beta subunit [Ruminococcus sp. 18P13] Length = 465 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 106/337 (31%), Positives = 169/337 (50%), Gaps = 10/337 (2%) Query: 65 INLDIVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGD 123 I D+V +G + + G D V R+ GRV N LG+P+D D + Sbjct: 48 IGDDVVRCIAMGTTDGLVRGTDAVDTGSPIRVPVGRETLGRVFNLLGEPVD-DKPAPQVK 106 Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 I + P + + +TGI+VID+ P G +IG+F G+G+GK+ L+ Sbjct: 107 EHWAIHREAPSYEEQTASSQVLETGIKVIDLIAPYLKGGKIGLFGGAGVGKTVLIQELIN 166 Query: 184 SDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239 + IS+ VGER RE + + + K+V+V +E P R L+ + Sbjct: 167 NVANQHGGISVFTGVGERTREGNDLYNEMKESGVIDKTVLVYGQMNEPPGARMRVGLSGL 226 Query: 240 TIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 T+AEYF +G +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI Sbjct: 227 TMAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERI- 285 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + KG+IT+V +V V D+ DP + + LD VL+R ++ G YP VDPL S S Sbjct: 286 -TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQISSLGIYPAVDPLDSTS 344 Query: 359 R-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 R L + + ++ ++ ++ R+ E +DI I G Sbjct: 345 RILTPEIVGQEHYEVARAVQTILQRYTELQDIIAIMG 381 >gi|255582911|ref|XP_002532227.1| ATP synthase beta subunit, putative [Ricinus communis] gi|223528084|gb|EEF30158.1| ATP synthase beta subunit, putative [Ricinus communis] Length = 561 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 164/310 (52%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+PID L K D + I + P +++ ++ TGI+V+D+ P Sbjct: 169 ATLGRIINVIGEPIDEKGDL-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDMLAPYQ 227 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 228 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 286 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF + Sbjct: 287 KLGDKQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 346 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 347 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 404 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SR+ +E + ++ ++ Sbjct: 405 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYK 464 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 465 NLQDIIAILG 474 >gi|182677217|ref|YP_001831363.1| F0F1 ATP synthase subunit beta [Beijerinckia indica subsp. indica ATCC 9039] gi|182633100|gb|ACB93874.1| ATP synthase F1, beta subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 482 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 105/319 (32%), Positives = 167/319 (52%), Gaps = 27/319 (8%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKG-FKTGIRVID 153 P C GR++N +G+P+D LG + + + ++ PA + Q E TGI+V+D Sbjct: 85 PVGEECLGRILNVIGEPVD---ELGPVNTTARRAIHQLAPAYDEQSTEAQILVTGIKVVD 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREF 205 + P G ++G+F G+G+GK+ L++ A++ V VGER RE E Sbjct: 142 LLAPYSKGGKVGLFGGAGVGKTVIIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEM 200 Query: 206 IEDYL-------GDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 IE ++ G + K K +V +E P R L+ +TIAE F KG +VL + Sbjct: 201 IESHVNVDPHEHGGSAKGSKCALVYGQMNEPPGARARVALSGLTIAEDFRDKGQDVLFFV 260 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V Sbjct: 261 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVP 318 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+RS+AE+G YP VDPL S SR+ +E V+ Sbjct: 319 ADDLTDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRILSPLIVGEEHYNVARQ 378 Query: 376 LTHLIHRFEETRDIRLIGG 394 + L+ R++ +DI I G Sbjct: 379 VQQLLQRYKSLQDIIAILG 397 >gi|46909255|gb|AAT06145.1| ATP synthase beta subunit [Stylochus sp. KJP-2004] Length = 427 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 162/307 (52%), Gaps = 19/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + LS I + P + ++ +TGI+V+D+ P G Sbjct: 64 LGRIINVIGEPIDERGPINAKMLS-SIHADAPDFEDMSTEQEILETGIKVVDLLAPYARG 122 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--------VREFIEDY 209 +IG+F G+G+GK+ L+ + AR+ V VGER RE ++ + D Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREGNDLYHEMIQTGVVDL 181 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 G+N K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 182 KGNN-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSE 240 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 241 VSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATT 298 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD VL+R +AE G YP VDPL S+SR+ D E V+ + ++ + + Sbjct: 299 FAHLDATTVLSRGIAELGIYPAVDPLDSMSRILDPNIVGTEHYTVAKGVQKILQDYRSLQ 358 Query: 388 DIRLIGG 394 DI I G Sbjct: 359 DIIAILG 365 >gi|45358608|ref|NP_988165.1| V-type ATP synthase subunit B [Methanococcus maripaludis S2] gi|74572167|sp|Q6LYE6|VATB_METMP RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|44921366|emb|CAF30601.1| A1A0 ATPase, subunit B [Methanococcus maripaludis S2] Length = 462 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 106/337 (31%), Positives = 169/337 (50%), Gaps = 26/337 (7%) Query: 43 VCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99 + G+ V N D GQV+ +I + E++ + + F +I S Sbjct: 29 IAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSY 88 Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 GR+ N GKP+DG ++ L + +S+ PP Q TG+ ID Sbjct: 89 DMLGRIFNGAGKPLDGGPEIIAEEKLDINGYPLNPVSRNPPNAFVQ-------TGVSTID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206 L GQ+I +F+GSG+ + L + AR + F V+ + +G G E F+ Sbjct: 142 GTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQF-AVVFAAMGITGEESNYFM 200 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264 +++ L+K+VV + +D+ I R + P A+T AEY + KG +VL+IL +T + Sbjct: 201 DEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCE 260 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REIA E+P RGYP ++++L L ER G + ++G +T + + + D+ PI Sbjct: 261 ALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHPI 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 D I +G IVL+R L +G YPPVD L S+SRLA Sbjct: 321 PDLTGYITEGQIVLSRELNRKGVYPPVDILPSLSRLA 357 >gi|23336548|ref|ZP_00121760.1| COG0055: F0F1-type ATP synthase, beta subunit [Bifidobacterium longum DJO10A] gi|23464956|ref|NP_695559.1| F0F1 ATP synthase subunit beta [Bifidobacterium longum NCC2705] gi|189439986|ref|YP_001955067.1| F0F1 ATP synthase subunit beta [Bifidobacterium longum DJO10A] gi|227545748|ref|ZP_03975797.1| H(+)-transporting two-sector ATPase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239622549|ref|ZP_04665580.1| F0F1 ATP synthase subunit beta [Bifidobacterium longum subsp. infantis CCUG 52486] gi|312133381|ref|YP_004000720.1| atpd [Bifidobacterium longum subsp. longum BBMN68] gi|317481935|ref|ZP_07940960.1| ATP synthase F1 [Bifidobacterium sp. 12_1_47BFAA] gi|322688429|ref|YP_004208163.1| ATP synthase subunit betaeta [Bifidobacterium longum subsp. infantis 157F] gi|322690448|ref|YP_004220018.1| ATP synthase beta subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|81847339|sp|Q8G7B3|ATPB_BIFLO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226739981|sp|B3DTV0|ATPB_BIFLD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|23325553|gb|AAN24195.1| ATP synthase beta chain [Bifidobacterium longum NCC2705] gi|189428421|gb|ACD98569.1| F0F1-type ATP synthase beta subunit [Bifidobacterium longum DJO10A] gi|227213864|gb|EEI81703.1| H(+)-transporting two-sector ATPase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|239514546|gb|EEQ54413.1| F0F1 ATP synthase subunit beta [Bifidobacterium longum subsp. infantis CCUG 52486] gi|291517458|emb|CBK71074.1| ATP synthase, F1 beta subunit [Bifidobacterium longum subsp. longum F8] gi|311772607|gb|ADQ02095.1| AtpD [Bifidobacterium longum subsp. longum BBMN68] gi|316916502|gb|EFV37899.1| ATP synthase F1 [Bifidobacterium sp. 12_1_47BFAA] gi|320455304|dbj|BAJ65926.1| ATP synthase beta subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|320459765|dbj|BAJ70385.1| ATP synthase beta subunit [Bifidobacterium longum subsp. infantis 157F] Length = 490 Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 137 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 196 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 197 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 256 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 257 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 314 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 315 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 374 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 375 GQAHYDCANRVKAILQRNKELQDIIALIG 403 >gi|283787579|ref|YP_003367444.1| ATP synthase subunit beta [Citrobacter rodentium ICC168] gi|282951033|emb|CBG90711.1| ATP synthase beta subunit [Citrobacter rodentium ICC168] Length = 460 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N LG+P+D KGD+ E I P ++ +TGI+VID+ Sbjct: 83 ATLGRIMNVLGEPVDM-----KGDIGEEERWAIHRDAPSYEELSNSQELLETGIKVIDLM 137 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 138 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDS 197 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 NVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 257 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P + GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 258 LLGRMPSSVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 315 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + ++ R++E +DI Sbjct: 316 LDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDII 375 Query: 391 LIGG 394 I G Sbjct: 376 AILG 379 >gi|156050413|ref|XP_001591168.1| ATP synthase beta chain, mitochondrial [Sclerotinia sclerotiorum 1980] gi|154692194|gb|EDN91932.1| ATP synthase beta chain, mitochondrial [Sclerotinia sclerotiorum 1980 UF-70] Length = 518 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 154/307 (50%), Gaps = 15/307 (4%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR++N G PID + K D + I + PP + + TGI+V+D+ P Sbjct: 119 AGTLGRIMNVTGDPIDERGPI-KTDKRLPIHADAPPFTEQSTTAEVLVTGIKVVDLLAPY 177 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--- 211 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 178 ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSV 236 Query: 212 ---DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 D K +V +E P R LT +T+AE F +G +VLL +D+I RF + E Sbjct: 237 IQLDGDSKVALVFGQMNEPPGARARVALTGLTLAEQFREEGQDVLLFIDNIFRFTQAGSE 296 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + Sbjct: 297 VSALLGRIPSAVGYQPTLAVDMGSMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATT 354 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ + Sbjct: 355 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGQDHYDTATRVQQMLQEYKSLQ 414 Query: 388 DIRLIGG 394 DI I G Sbjct: 415 DIIAILG 421 >gi|153809937|ref|ZP_01962605.1| hypothetical protein RUMOBE_00318 [Ruminococcus obeum ATCC 29174] gi|149834115|gb|EDM89195.1| hypothetical protein RUMOBE_00318 [Ruminococcus obeum ATCC 29174] Length = 464 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 157/302 (51%), Gaps = 10/302 (3%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 AC GRV N LG P+D + + I P + + +TGI+V+D+ P Sbjct: 86 ACL-GRVFNLLGDPVD-NKPAPEAKERWSIHRPAPSYEEQMPATEILETGIKVVDLICPY 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 144 AKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGLSVFTGVGERTREGNDLYNEMKESGVI 203 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ Sbjct: 204 DKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDEKNQDVLLFIDNIFRFTQAGSEVSALL 263 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + S LD Sbjct: 264 GRMPSAVGYQPTLATEMGNLQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFSHLD 321 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 VL+R ++ +G YP VDPL S SR L+ + + ++ S+ ++ R++E +DI I Sbjct: 322 ATTVLSREISSQGIYPAVDPLDSTSRILSPEIVGKEHYEIARSVQRVLQRYKELQDIIAI 381 Query: 393 GG 394 G Sbjct: 382 MG 383 >gi|310778011|ref|YP_003966344.1| ATP synthase F1 subcomplex beta subunit [Ilyobacter polytropus DSM 2926] gi|309747334|gb|ADO81996.1| ATP synthase F1 subcomplex beta subunit [Ilyobacter polytropus DSM 2926] Length = 467 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 171/333 (51%), Gaps = 24/333 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIF 155 GR++N LG+PID G++ E S + PA Q E + F+TGI+VID+ Sbjct: 84 AVLGRILNVLGEPIDQ-----AGEVKAEEYSSIHREAPAFEDQGTEVEIFETGIKVIDLL 138 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + +S+ VGER RE R+ ++ Sbjct: 139 APYVKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGERTREGRDLFDEMTES 198 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270 L K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ Sbjct: 199 GVLSKTSLVYGQMNEPPGARLRVALTGLTMAENFRDKEGQDVLLFIDNIFRFTQAGSEVS 258 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 259 ALLGRMPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFT 316 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VL+R +A G YP VDPL S S + E + + ++ R++E +DI Sbjct: 317 HLDATTVLSRRIASLGIYPAVDPLDSTSTALQPGITGHEHYTAAREVQSVLQRYKELQDI 376 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I G+D + D+ AV++ I F Q Sbjct: 377 IAI----LGMDELSDEDKIAVNRARKIERFFSQ 405 >gi|113204646|gb|ABI34071.1| F1-ATP synthase beta subunit [Pacifastacus leniusculus] Length = 525 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 163/309 (52%), Gaps = 25/309 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+IN +G+PID +G + E S + P +N ++ TGI+V+D+ P Sbjct: 139 GRIINVIGEPIDE-----RGPVPTEFYSAIHAEAPDFVNMSVEQEILVTGIKVVDLLAPY 193 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED-- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 194 SKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGV 252 Query: 209 -YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 253 ISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAG 312 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP Sbjct: 313 SEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPA 370 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R +AE G YP VDPL S+SR+ D A+ + ++ ++ + Sbjct: 371 TTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMDPNIIGAEHYNVARAVQKILQDHKS 430 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 431 LQDIIAILG 439 >gi|323490921|ref|ZP_08096116.1| F0F1 ATP synthase subunit beta [Planococcus donghaensis MPA1U2] gi|323395401|gb|EGA88252.1| F0F1 ATP synthase subunit beta [Planococcus donghaensis MPA1U2] Length = 471 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 107/347 (30%), Positives = 177/347 (51%), Gaps = 16/347 (4%) Query: 84 GDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G +V GR P GRV N LG+ ID + + + I P + Sbjct: 71 GSVVTDLGRAISVPVGDVTLGRVFNVLGEIIDLGEEIPLTERRDPIHRSAPTFEHLSTEV 130 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERG 199 + +TGI+V+D+ P G +IG+F G+G+GK+ L+ + + +S+ VGER Sbjct: 131 EILETGIKVVDLLAPYIKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGLSVFAGVGERT 190 Query: 200 REVRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257 RE + F E +KK+ +V +E P R L+ +T+AEYF +G +VLL +D Sbjct: 191 REGNDLFHEMSESGVIKKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGADVLLFID 250 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + E++ G +P A GY ++ +E+ +L ERI + G++T++ ++ V Sbjct: 251 NIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TTTSAGSVTSIQAIYVPA 308 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSL 376 D++ DP + + LD L R L+E G YP VDPLAS SR L+ + A+ + + Sbjct: 309 DDYTDPAPATTFAHLDATTNLERKLSEMGIYPAVDPLASTSRALSPEIVGAEHYAISREV 368 Query: 377 THLIHRFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 + R+ E +DI I G+D + D+ V++ + +FL Q+ Sbjct: 369 QETLQRYRELQDIIAI----LGMDELSDEDKLTVNRARRVQNFLSQN 411 >gi|320096093|ref|ZP_08027693.1| ATP synthase F1 sector beta subunit [Actinomyces sp. oral taxon 178 str. F0338] gi|319976973|gb|EFW08716.1| ATP synthase F1 sector beta subunit [Actinomyces sp. oral taxon 178 str. F0338] Length = 482 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 154/274 (56%), Gaps = 11/274 (4%) Query: 129 MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PPA ++ K F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 127 IHRQPPAFDQLEARTKMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 186 Query: 188 DKVIISL---VGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVTIA 242 D +S+ VGER RE + I++ +G+ K+ +V DE P R LT +T+A Sbjct: 187 DHGGVSVFAGVGERTREGNDLIKE-MGEAGVFDKTALVFGQMDEPPGTRLRIALTGLTMA 245 Query: 243 EYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 EYF + +VLL +D+I RF + E++T G +P A GY ++ E+ +L ERI + Sbjct: 246 EYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TS 303 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPLAS SR+ Sbjct: 304 AGGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIAAKGIYPAVDPLASTSRIL 363 Query: 362 DKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 D A E V++ + ++ + +E +DI I G Sbjct: 364 DPALVGREHYDVATHVKAILQKNKELQDIIAILG 397 >gi|296802112|gb|ADH51554.1| mitochondrial H+-transporting ATP synthase F1 complex beta polypeptide [Rousettus leschenaultii] Length = 479 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 114 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 172 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 173 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 231 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 232 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 291 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 292 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 349 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 350 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 409 Query: 389 IRLIGG 394 I I G Sbjct: 410 IIAILG 415 >gi|283975502|gb|ADB55725.1| ATP synthase beta chain [Pseudozyma flocculosa] Length = 414 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 20/306 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + KG+ I + P +++ + +TGI+V+D+ P G Sbjct: 30 GRIMNVIGEPMDERGPI-KGNKLSPIHVEPPAFVDQSTTAEVLETGIKVVDLLAPYARGG 88 Query: 163 RIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L+ A++ V VGER RE E IE + Sbjct: 89 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFTG-VGERTREGNDLYHEMIETGVINLE 147 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 148 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSET 205 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 206 SALLGRIPSAVGYQPTLATDMGVMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTF 263 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D A E + + + L+ ++ +D Sbjct: 264 AHLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPAIVGREHYDIATGVQKLLQDYKSLQD 323 Query: 389 IRLIGG 394 I I G Sbjct: 324 IIAILG 329 >gi|317130747|ref|YP_004097029.1| ATP synthase F1 subunit beta [Bacillus cellulosilyticus DSM 2522] gi|315475695|gb|ADU32298.1| ATP synthase F1, beta subunit [Bacillus cellulosilyticus DSM 2522] Length = 470 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 155/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ ID D + I + P + +TGI+V+D+ P G Sbjct: 92 LGRVFNVLGENIDLDAPIPDSVRRDPIHRQAPVYEELSTETEILETGIKVVDLLAPYIKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E + K+ Sbjct: 152 GKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVINKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L+ +T+AEYF KG +VLL +D+I RF + E++ G + Sbjct: 212 AMVFGQMNEPPGARMRVALSGLTMAEYFRDEKGADVLLFIDNIFRFTQAGGEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG++T++ ++ V D++ DP + + LD Sbjct: 272 PSAVGYQPTLATEMGMLQERI--TSTKKGSVTSIQAIYVPADDYTDPAPATTFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L R L+E G YP VDPLAS SR DE ++ + + +++E +DI I G Sbjct: 330 NLERKLSEMGIYPAVDPLASTSRALSPEVCGDEHYEVARQVQQTLQKYKELQDIIAILG 388 >gi|38906105|gb|AAR27805.1| ATP synthase beta chain [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 373 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326 >gi|38906107|gb|AAR27806.1| ATP synthase beta chain [Bifidobacterium longum subsp. suis] Length = 373 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326 >gi|34500032|gb|AAQ73598.1| ATP synthase beta subunit [Avibacterium gallinarum] Length = 444 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 153/297 (51%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G + + I P ++ + +TGI+VID+ P G Sbjct: 83 GRIMNVLGEPIDEQGPIG-AEETWSIHRPAPSYEDQANSTELLETGIKVIDLICPFAKGG 141 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKVS 201 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 261 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 262 AVGYQPTLAEEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 319 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPL S SR D E V+ + R+ E +DI I G Sbjct: 320 SRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGTYKRYRELKDIIAILG 376 >gi|2493028|sp|Q25117|ATPB_HEMPU RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|391913|dbj|BAA04178.1| H(+)-transporting ATPase beta subunit [Hemicentrotus pulcherrimus] gi|1094359|prf||2105433A H ATPase:SUBUNIT=beta Length = 523 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 96/272 (35%), Positives = 148/272 (54%), Gaps = 16/272 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID +G D I ++ P + ++ TGI+V+D+ P G Sbjct: 137 GRIINVIGEPIDERGPIGT-DRRSAIHAEAPEFVEMSVNQEILVTGIKVVDLLAPYAKGG 195 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 196 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISLK 254 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 255 DDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 314 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 315 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 372 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 LD VL+R +AE G YP VDPL S SR+ D Sbjct: 373 HLDATTVLSRGIAELGIYPAVDPLDSSSRIMD 404 >gi|261491751|ref|ZP_05988331.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261495499|ref|ZP_05991946.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str. OVINE] gi|261308833|gb|EEY10089.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312590|gb|EEY13713.1| ATP synthase beta subunit [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 463 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P + + +TGI+VID+ P G Sbjct: 88 LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQANSTELLETGIKVIDLVAPFAKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 147 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 207 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 266 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 267 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 324 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 325 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 382 >gi|126343750|ref|XP_001364069.1| PREDICTED: similar to ATP synthase subunit beta, mitochondrial [Monodelphis domestica] Length = 525 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 138 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 196 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 197 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 255 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 256 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 315 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 316 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 373 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 374 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 433 Query: 389 IRLIGG 394 I I G Sbjct: 434 IIAILG 439 >gi|332289264|ref|YP_004420116.1| F0F1 ATP synthase subunit beta [Gallibacterium anatis UMN179] gi|330432160|gb|AEC17219.1| F0F1 ATP synthase subunit beta [Gallibacterium anatis UMN179] Length = 457 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDERGPIGE-KARWSIHRAAPSYEEQANSTELLETGIKVIDLVCPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|301761023|ref|XP_002916040.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Ailuropoda melanoleuca] gi|281353277|gb|EFB28861.1| hypothetical protein PANDA_004098 [Ailuropoda melanoleuca] Length = 528 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|38710233|gb|AAR27321.1| AtpD [Bifidobacterium animalis] gi|38710235|gb|AAR27322.1| AtpD [Bifidobacterium animalis subsp. lactis] gi|38710237|gb|AAR27323.1| AtpD [Bifidobacterium animalis subsp. lactis] gi|38710241|gb|AAR27325.1| AtpD [Bifidobacterium animalis subsp. lactis] gi|38710243|gb|AAR27326.1| AtpD [Bifidobacterium animalis] Length = 377 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 149/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I + L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A G YP VDPLAS SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLASTSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326 >gi|313673547|ref|YP_004051658.1| ATP synthase f1 subcomplex beta subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312940303|gb|ADR19495.1| ATP synthase F1 subcomplex beta subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 468 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 101/298 (33%), Positives = 155/298 (52%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G P+D + D I P ++ +TGI+VID+ P G Sbjct: 89 GRILNVVGDPVDEKGPVDAVDY-WPIHRPAPKLEDQDTGSNILETGIKVIDLLEPYTKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ L+ + S+ VGER RE + ++E L K Sbjct: 148 KTGLFGGAGVGKTVLIMELINNIAKQHGGYSVFCGVGERTREGNDLYLEMKESGVLDKVA 207 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ G +P Sbjct: 208 LVYGQMNEPPGARMRVGLTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD V Sbjct: 268 SAVGYQPTLGTEMGELQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR+ D E V+ + ++ R++E +DI I G Sbjct: 326 LSRQIAELGIYPAVDPLDSTSRILDPNIVGVEHYTVAREVQKILQRYKELQDIIAILG 383 >gi|289651622|ref|ZP_06482965.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aesculi str. 2250] Length = 277 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 119/202 (58%), Gaps = 3/202 (1%) Query: 70 VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI 128 V++ PVG I+ G V R+ GRV++ G+P+DG + D Sbjct: 77 VFLMPVGSVAGIAPGARVVPLADTGRLPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMD 136 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD 188 + P + R + + GIR I+ + GQR+G+FAG+G+GKS LL M R D Sbjct: 137 GPTINP-LKRDPISQPLDVGIRCINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD 195 Query: 189 KVIISLVGERGREVREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +++ L+GERGREV+EFIE LG + LK+SVVV + +D++P++R A + IAEYF Sbjct: 196 IIVVGLIGERGREVKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRD 255 Query: 248 KGDNVLLILDSITRFAHSIREI 269 KG NVLL++DS+TRFA + REI Sbjct: 256 KGKNVLLLMDSLTRFAQAQREI 277 >gi|284999825|dbj|BAI67813.1| ATP synthase beta-subunit [Asterococcus korschikoffii] Length = 376 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 162/311 (52%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG K D ++ I K P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NLGPVKTDQTLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R L+A+T+AEYF G +VL +D+I RF + Sbjct: 148 EKNLSDS--KVALVYGQMNEPPGARMRVALSALTMAEYFRDFNGQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + LD VL+R+LA +G YP VDPL S S + + W +K S+ + R+ Sbjct: 264 STTFVHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDKHYNCAQSVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|258690462|gb|ACV87993.1| ATP synthase beta subunit [Haliclona sp. KJP-2009] Length = 427 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 102/330 (30%), Positives = 169/330 (51%), Gaps = 18/330 (5%) Query: 79 EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 E + G++ G RI GR+IN +G+PID +G + I ++ P + Sbjct: 40 EGLVRGEVCLDMGTPIRIPVGPKTLGRIINVIGEPIDERGPIGSEHFA-NIHAEAPDFED 98 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIIS 193 ++ TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V Sbjct: 99 MSTDQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG 158 Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF- 245 VGER RE + + L D+ K +V +E P R LT +T+AEYF Sbjct: 159 -VGERTREGNDLYHEMITSGVISLKDDSSKVALVYGQMNEPPGARARVALTGLTVAEYFR 217 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VLL +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG Sbjct: 218 DQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKG 275 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V ++ V D+ DP + + LD VL+R+++E G YP VDPL S SR+ D Sbjct: 276 SITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSTSRIMDPNI 335 Query: 366 SADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 E V+ + ++ ++ +DI I G Sbjct: 336 VGQEHYSVARGVQKILQDYKSLQDIIAILG 365 >gi|296446128|ref|ZP_06888076.1| ATP synthase F1, beta subunit [Methylosinus trichosporium OB3b] gi|296256322|gb|EFH03401.1| ATP synthase F1, beta subunit [Methylosinus trichosporium OB3b] Length = 486 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 162/314 (51%), Gaps = 30/314 (9%) Query: 103 GRVINALGKPID---GDDSLGK----------------GDLSMEIMSKVPPAMNRQRVEK 143 GR + A G PI GD +LG+ D + + PP + QR Sbjct: 78 GRRVRATGGPIAIPVGDATLGRLIDVTGAIGDNGPPLPADAPRRPIHRAPPPLA-QRPGG 136 Query: 144 G--FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGER 198 G F TGI++ID+ TP+ G + +F G+G+GK+ L+ + A + V + + VGER Sbjct: 137 GEIFATGIKIIDLLTPIAQGGKAAMFGGAGVGKTVLVMELIHAMVSGYRGVSVFAGVGER 196 Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 RE E + D L+++V+V +E P R APL A+TIAEYF K NVLL++ Sbjct: 197 SREGHELLLDMARSGVLERTVLVYGQMNEPPGARWRAPLAALTIAEYFRDEKRQNVLLLM 256 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G P GY ++ SE+ L ERI + +TA+ +V V Sbjct: 257 DNIFRFVQAGAEVSGLLGRSPSRVGYQPTLASEVAALHERI--ASVGGVGVTAIEAVYVP 314 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSS 375 D+ DP ++ + +D IVL+R +A EG YP +DP+AS S L D + ++ + Sbjct: 315 ADDFTDPAVTTIATHIDSMIVLSRQMAAEGMYPAIDPIASSSVLLDPLVVGEAHAEVATE 374 Query: 376 LTHLIHRFEETRDI 389 + +I + E +D+ Sbjct: 375 VRRVIEHYLELQDV 388 >gi|260753212|ref|YP_003226105.1| F0F1 ATP synthase subunit beta [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258552575|gb|ACV75521.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 484 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 21/319 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ GR++N +G+P+D +G +M I + PP + TGI+VID Sbjct: 83 RVPVGPETLGRIMNVVGRPVDERGPIGSKQ-TMPIHADAPPFTEQSTDTAILTTGIKVID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206 + P G ++G+F G+G+GK+ L+ + + + VGER RE EF+ Sbjct: 142 LLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGFSVFAGVGERTREGNDLYHEFL 201 Query: 207 E------DYLGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 E D G+ + K +V +E P R L+ +T+AEYF +G +VL + Sbjct: 202 EAGVIASDKDGNAISEGSKVALVYGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFV 261 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ +L ERI + +KG+IT+V ++ V Sbjct: 262 DNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKKGSITSVQAIYVP 319 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375 D+ DP + + LD VL+R+++E G YP VDPL S SR + DE K Sbjct: 320 ADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLDSSSRNLEPRIVGDEHYKTARD 379 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ R++ +DI I G Sbjct: 380 VQEILQRYKNLQDIIAILG 398 >gi|112791364|gb|ABI21952.1| ATP synthase beta subunit [Enterobacter cancerogenus] Length = 421 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEELSNSQELLETGIKVIDLICPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 295 VTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|310828005|ref|YP_003960362.1| H(+)-transporting two-sector ATPase [Eubacterium limosum KIST612] gi|308739739|gb|ADO37399.1| H(+)-transporting two-sector ATPase [Eubacterium limosum KIST612] Length = 461 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 112/387 (28%), Positives = 185/387 (47%), Gaps = 30/387 (7%) Query: 26 ISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD 85 I+ + V+Y Q G+ V +GK G I + V+ G+ E S+ Sbjct: 18 ITDVEDVFYGEVVNIQDQATGE--VKKGKVIKIDGTTITVQ---VFQSTAGLAAENSVTR 72 Query: 86 LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA----MNRQRV 141 F F+I S GRV N +G+PID D+ I S + A M+R+ Sbjct: 73 --FTGDAFKIPMSMDLMGRVFNGIGEPIDN-----GADIFSTIESNINGAPINPMSREYP 125 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR----SDCFDK---VIISL 194 +TGI ID+ L GQ++ + +G+G+ + L + R SD D+ ++ + Sbjct: 126 RNFIQTGISAIDVLMTLIRGQKLPILSGNGLSHNELAAQIVRQAKLSDDVDEQFAIVFAA 185 Query: 195 VGERGREVREFIEDYLGDNLKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NV 252 +G + + + F + + N+ VV+ + P+ R AP A+T+AEY + + D ++ Sbjct: 186 IGVKHDDEKFFRKTFEEANVMDRVVMFVNYADDPVAERNTAPRCALTVAEYLAFQKDMHI 245 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 L+++ IT + +REI++ E+P +GYP ++S+L L ER G + KG+IT + Sbjct: 246 LVVMSDITAYCEGLREISSAREEVPSRKGYPGYMYSDLAALYERAGMLKSSKGSITFLPI 305 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSA 367 + + D+ PI D I +G IVL R L + YPP+D L S+SRL + Sbjct: 306 LTMPNDDITHPIPDLTGYITEGQIVLGRDLFQRSIYPPIDVLPSLSRLMKDGIGEGYTRE 365 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGG 394 D + L + L R +E RD+ I G Sbjct: 366 DHQDLANQLFAAYSRVQEVRDLSQIMG 392 >gi|163751422|ref|ZP_02158647.1| ATP synthase subunit B [Shewanella benthica KT99] gi|161328725|gb|EDP99873.1| ATP synthase subunit B [Shewanella benthica KT99] Length = 458 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 158/302 (52%), Gaps = 10/302 (3%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 + GR++N LG+PID +G D + I + P + + +TGI+VID+ P Sbjct: 80 SVTLGRIMNVLGEPIDEAGPIGGTDHYV-IHREAPTFEEQSSSTELLETGIKVIDLICPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDAGV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ Sbjct: 198 LDKVTMVYGQMNEPPGNRLRVALTGLTMAERFRDEGKDVLFFIDNIYRYTLAGTEVSALL 257 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 258 GRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLD 315 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 IVL+R++A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 316 ATIVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAI 375 Query: 393 GG 394 G Sbjct: 376 LG 377 >gi|237785857|ref|YP_002906562.1| F0F1 ATP synthase subunit beta [Corynebacterium kroppenstedtii DSM 44385] gi|259585442|sp|C4LJL4|ATPB_CORK4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|237758769|gb|ACR18019.1| ATP synthase beta chain [Corynebacterium kroppenstedtii DSM 44385] Length = 478 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 167/299 (55%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D + LG+ I K PPA ++ + + +TGI+VID+ TP G Sbjct: 100 GHVFNALGDCLD-EPGLGRDGEQWSIHRK-PPAFDQLEGKTEILETGIKVIDLLTPYVKG 157 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 158 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 217 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF + +VLL +D+I RF+ + E++T G + Sbjct: 218 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFSQAGSEVSTLLGRM 277 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI ++ +IT++ +V V D++ DP +V + LD Sbjct: 278 PSAVGYQPTLADEMGELQERITSTKGR--SITSLQAVYVPADDYTDPAPATVFAHLDATT 335 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+A +G YP V+PL S SR+ + +E ++ + +++ + +E +DI I G Sbjct: 336 ELDRSIASKGIYPAVNPLTSTSRILEPGIVGEEHYQVAQRVINILQKNKELQDIIAILG 394 >gi|154488032|ref|ZP_02029149.1| hypothetical protein BIFADO_01601 [Bifidobacterium adolescentis L2-32] gi|154083505|gb|EDN82550.1| hypothetical protein BIFADO_01601 [Bifidobacterium adolescentis L2-32] Length = 494 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 151/269 (56%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 141 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 200 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 201 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 260 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 261 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 318 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 319 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 378 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 379 GQAHYECANRVKAILQRNKELQDIIALIG 407 >gi|170744668|ref|YP_001773323.1| F0F1 ATP synthase subunit beta [Methylobacterium sp. 4-46] gi|168198942|gb|ACA20889.1| ATP synthase F1, beta subunit [Methylobacterium sp. 4-46] Length = 484 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 100/320 (31%), Positives = 163/320 (50%), Gaps = 23/320 (7%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRV 151 ++ A GR++N +G+PID ++ S + + P+ Q E TGI+V Sbjct: 86 IKVPVGANTLGRIMNVIGEPIDEAGAIEA--QSFRAIHQPAPSYAEQSTEAQILVTGIKV 143 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203 +D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 144 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHSGYSVFAG-VGERTREGNDLYH 202 Query: 204 EFIEDYLGDNLK--------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLI 255 E IE + + K K +V +E P R LT +T+AE+F +G +VL Sbjct: 203 EMIESKVNMDPKEHGSAEGSKCALVYGQMNEPPGARARVALTGLTVAEHFRDEGQDVLFF 262 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V Sbjct: 263 VDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYV 320 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS- 374 D+ DP + + LD VL+RS+AE+G YP VDPL S SR+ +E + Sbjct: 321 PADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPTILGEEHYATAR 380 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + ++ R++ +DI I G Sbjct: 381 RVQQVLQRYKALQDIIAILG 400 >gi|108800840|ref|YP_641037.1| F0F1 ATP synthase subunit beta [Mycobacterium sp. MCS] gi|119869980|ref|YP_939932.1| F0F1 ATP synthase subunit beta [Mycobacterium sp. KMS] gi|122976658|sp|Q1B553|ATPB_MYCSS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358685|sp|A1UJY4|ATPB_MYCSK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|108771259|gb|ABG09981.1| ATP synthase F1, beta subunit [Mycobacterium sp. MCS] gi|119696069|gb|ABL93142.1| ATP synthase F1, beta subunit [Mycobacterium sp. KMS] Length = 509 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 163/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG +D D GK D + + PPA + R E +TG++V+D+ TP Sbjct: 103 GHVFNALGACLD-DPGYGK-DFEKWSIHRKPPAFDELEPRTEM-LETGLKVVDLLTPYVR 159 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 G +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK Sbjct: 160 GGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKD 219 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF K +VLL +D+I RF + E++T G Sbjct: 220 TALVFGQMDEPPGTRMRVALSALTMAEYFRDEKQQDVLLFIDNIFRFTQAGSEVSTLLGR 279 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 280 MPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDAT 337 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ +G +P VDPLAS S + D + DE ++ + ++ R+++ +DI I G Sbjct: 338 TELSRSVFSKGIFPAVDPLASSSTILDPSVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 397 >gi|18033073|gb|AAL56978.1|AF326330_1 ATP synthase [Avibacterium gallinarum] Length = 431 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 153/297 (51%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G + + I P ++ + +TGI+VID+ P G Sbjct: 72 GRIMNVLGEPIDEQGPIG-AEETWSIHRPAPSYEDQANSTELLETGIKVIDLICPFAKGG 130 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 131 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKVS 190 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 191 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 250 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 251 AVGYQPTLAEEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 308 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPL S SR D E V+ + R+ E +DI I G Sbjct: 309 SRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGTYKRYRELKDIIAILG 365 >gi|114331986|ref|YP_748208.1| ATP synthase F1, alpha subunit [Nitrosomonas eutropha C91] gi|122313307|sp|Q0AEI9|ATPA2_NITEC RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP synthase F1 sector subunit alpha 2; AltName: Full=F-ATPase subunit alpha 2 gi|114309000|gb|ABI60243.1| ATP synthase F1, alpha subunit [Nitrosomonas eutropha C91] Length = 516 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 110/333 (33%), Positives = 171/333 (51%), Gaps = 17/333 (5%) Query: 72 ICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME--I 128 I +G E+I LG+ V+ + P + GRVI+A+G+P D+LG D E I Sbjct: 81 IILLGPSEQIHLGETVYRTRKVVSVPVGSALLGRVIDAMGRP---RDTLGPIDAIAEHPI 137 Query: 129 MSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFAR 183 ++ P +NR ++ + TG++ ID P+ GQR + GK+ T+L+ AR Sbjct: 138 EAEAPSILNRTQIFRPLATGLKAIDAAIPVGLGQRELIIGDRQTGKTSIAIDTMLNQ-AR 196 Query: 184 SDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242 SD I VG+RG V I G+ L++ +V+ A +E+P L +AP A+T+A Sbjct: 197 SDVL--CIYCAVGQRGDAVARVIRALKDGEMLQRCIVMSAGDEEAPGLSYIAPYAAMTMA 254 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP--S 300 EYFS++G +VL+I D +T A S RE++ P +P +F RLLER G + Sbjct: 255 EYFSAQGQDVLVIFDDMTHHARSYRELSLLLRRPPGREAFPGDIFYVHARLLERAGQFGA 314 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + G+IT + V N + I ++ SI DG I L+ L + ++P VD SVSR+ Sbjct: 315 DIGGGSITTLPVVETQAGNLSAYIPTNLISITDGQIYLSPQLVRKNQFPAVDLGLSVSRV 374 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 KA + + + +L + +FEE D G Sbjct: 375 GSKAQNRTLRGVSGNLRVTLSQFEELEDFARFG 407 >gi|262201860|ref|YP_003273068.1| ATP synthase F1 subunit beta [Gordonia bronchialis DSM 43247] gi|262085207|gb|ACY21175.1| ATP synthase F1, beta subunit [Gordonia bronchialis DSM 43247] Length = 482 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 161/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + G+ I K PP + + +TGI+VID+ TP G Sbjct: 104 GHVFNALGDCLDAPGT-GRDGEQWSIHRKPPPFDELEGKTEILETGIKVIDLLTPYVKGG 162 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ + Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF K +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRMRVALSALTMAEYFRDEKHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + +IT++ ++ V D++ DP + + LD Sbjct: 283 SAVGYQPTLADEMGELQERI--TSTKGRSITSLQAIYVPADDYTDPAPATTFAHLDATTE 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +++ G YP VDPL S SR+ + + DE ++ + + ++ +++E +DI I G Sbjct: 341 LSRPISQLGIYPAVDPLTSTSRILEASIVGDEHFRVANEVKRILQKYKELQDIIAILG 398 >gi|89898927|ref|YP_521398.1| F0F1 ATP synthase subunit beta [Rhodoferax ferrireducens T118] gi|118573732|sp|Q223D6|ATPB1_RHOFD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|89343664|gb|ABD67867.1| ATP synthase F1, beta subunit [Rhodoferax ferrireducens T118] Length = 474 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 122/402 (30%), Positives = 194/402 (48%), Gaps = 27/402 (6%) Query: 11 LAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIV 70 +A+D N VQG + I +V Q + D + +G ++ L ++ IV Sbjct: 1 MAQDTQTNTAVQGKIVQCIGAVVDVEFPRDQMPKIYDALKLEG-SALTLEVQQQLGDGIV 59 Query: 71 YICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME-- 127 +G + + G +V + + P GR+++ LG PID +G +S E Sbjct: 60 RTIALGSSDGLRRGLMVSNTANPIMVPVGTATLGRIMDVLGTPIDE-----RGPVSTEKY 114 Query: 128 --IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMF 181 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ Sbjct: 115 ASIHRKAPTYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNI 174 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKM 233 A++ V VGER RE +F + +NL +S V V +E P R Sbjct: 175 AKAHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLR 233 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 LT +TIAE F +G +VL +D+I RF + E++ G +P A GY ++ E+ RL Sbjct: 234 VALTGLTIAESFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRL 293 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 ERI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDP Sbjct: 294 QERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDP 351 Query: 354 LASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L S SR D D + ++ + R++E RDI I G Sbjct: 352 LDSTSRQLDPNVVGQDHYETARAVQGTLQRYKELRDIIAILG 393 >gi|293611147|ref|ZP_06693445.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826398|gb|EFF84765.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|325124141|gb|ADY83664.1| F0F1 ATP synthase subunit beta [Acinetobacter calcoaceticus PHEA-2] Length = 464 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + + I + P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD +VL+R +A G YP +DPL S SR D E ++ ++ +++ R++E + Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARAVQNVLQRYKELK 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|228474924|ref|ZP_04059653.1| ATP synthase F1, beta subunit [Staphylococcus hominis SK119] gi|314935948|ref|ZP_07843298.1| ATP synthase F1, beta subunit [Staphylococcus hominis subsp. hominis C80] gi|228271156|gb|EEK12536.1| ATP synthase F1, beta subunit [Staphylococcus hominis SK119] gi|313655954|gb|EFS19696.1| ATP synthase F1, beta subunit [Staphylococcus hominis subsp. hominis C80] Length = 470 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 96/301 (31%), Positives = 162/301 (53%), Gaps = 12/301 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID ++ + + + + + P + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLNEKI-DSSVRRDPIHRRQPNFDELSTEVEILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ + Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVIN 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L+A+T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 207 KTAMVFGQMNEPPGARMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I Sbjct: 325 TTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVAREVQSTLQKYRELQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|170729216|ref|YP_001763242.1| F0F1 ATP synthase subunit beta [Shewanella woodyi ATCC 51908] gi|226740675|sp|B1KQ34|ATPB_SHEWM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|169814563|gb|ACA89147.1| ATP synthase F1, beta subunit [Shewanella woodyi ATCC 51908] Length = 458 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 14/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+P+D +G+ + + I + P ++ + +TGI+VID+ P G Sbjct: 83 LGRIMNVLGQPVDEAGEIGEEERYV-IHREAPSYEDQSNTTELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF---IEDYLGDNL 214 ++G+F G+G+GK+ L++ A++ V VGER RE +F +ED L Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMED--SGVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTEVSALLG 258 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 259 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 316 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R++A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 317 TVVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 376 Query: 394 G 394 G Sbjct: 377 G 377 >gi|38906097|gb|AAR27801.1| ATP synthase beta chain [Bifidobacterium catenulatum] Length = 373 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 151/269 (56%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 298 GQAHYECANRVKAILQRNKELQDIIALIG 326 >gi|195953395|ref|YP_002121685.1| F0F1 ATP synthase subunit beta [Hydrogenobaculum sp. Y04AAS1] gi|195933007|gb|ACG57707.1| ATP synthase F1, beta subunit [Hydrogenobaculum sp. Y04AAS1] Length = 470 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 111/328 (33%), Positives = 175/328 (53%), Gaps = 18/328 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N +G+PID + D M + PP + Q + + +TGI+VID+ P Sbjct: 94 LGRVFNVVGQPIDEAGDVKATD--HWPMFRDPPPLTEQSTKVEILETGIKVIDLLEPYVK 151 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDC-FDK---VIISLVGERGREVREFIEDYLGDN--L 214 G ++G+F G+G+GK+ L+ + F K V+I VGER RE + + + D+ L Sbjct: 152 GGKVGLFGGAGVGKTVLMQELIHNIAKFHKGYSVVIG-VGERTREGNDLWHE-MKDSGVL 209 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 +V+V +E P +R T +T+AEYF +G +VL +D+I RF + E++T Sbjct: 210 PYTVMVYGQMNEPPGVRFRVAQTGITMAEYFRDIQGQDVLTFIDNIFRFVQAGSEVSTLL 269 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G LP A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP S+ + LD Sbjct: 270 GRLPSAVGYQPTLNTDVGEVQERI--TSTKKGSITSVQAVYVPADDITDPAPYSIFAHLD 327 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 VL R L E G YP +DPL S S+ LA + + + + ++ R++E ++I I Sbjct: 328 ATTVLARRLTELGIYPAIDPLESTSKYLAPEFVGQEHYSVAMEVKRILQRYKELQEIIAI 387 Query: 393 GGYRPGVDLILDKA-VHQVPIIYDFLKQ 419 G D DKA V++ I FL Q Sbjct: 388 LGMEELSD--EDKAIVNRARRIQKFLSQ 413 >gi|183206492|gb|ACC54444.1| ATP synthase beta subunit [Campanula saxatilis] Length = 498 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 176/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 50 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ L+ + +S+ VGER RE + ++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKDSGVINEQK 226 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 227 FAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 ITILG 409 >gi|221135161|ref|ZP_03561464.1| F0F1 ATP synthase subunit beta [Glaciecola sp. HTCC2999] Length = 460 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + M I + P + + +TGI+VID+ P G Sbjct: 86 LGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPSYEEQSSSVELLETGIKVIDLVCPFAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNDSNVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 205 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E + + R++E +DI I G Sbjct: 323 LSRDIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTAQGVQTTLQRYKELKDIIAILG 380 >gi|112791366|gb|ABI21953.1| ATP synthase beta subunit [Dickeya paradisiaca] Length = 421 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG P+D +G+ + I P + ++ +TGI+VID+ P Sbjct: 58 ATLGRIMNVLGDPVDMKGPIGEEE-RWSIHRAAPSYEDLSNSQELLETGIKVIDLICPFA 116 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 117 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 176 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 177 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 236 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 237 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 294 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 295 VTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 354 >gi|251791748|ref|YP_003006469.1| F0F1 ATP synthase subunit beta [Dickeya zeae Ech1591] gi|247540369|gb|ACT08990.1| ATP synthase F1, beta subunit [Dickeya zeae Ech1591] Length = 460 Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEELSNSQELLETGIKVIDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|162447826|ref|YP_001620958.1| V-type ATP synthase subunit B [Acholeplasma laidlawii PG-8A] gi|161985933|gb|ABX81582.1| V-type H+-transporting ATPase subunit B [Acholeplasma laidlawii PG-8A] Length = 459 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 99/316 (31%), Positives = 167/316 (52%), Gaps = 13/316 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+V+ I+ D +V + G +I VF + S GR+ + +G+P DG Sbjct: 43 GRVLEIDQDKALVQLFESSQGLKIEDAKAVFLGHGLELDLSPLILGRIFSGMGEPKDGKG 102 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + ++ M+I + R + +TG+ ID L GQ++ +F+GSG+ + L Sbjct: 103 KIIP-EMKMDINGIPLNPVARDYPSEFIQTGVSSIDGLNTLVRGQKLPIFSGSGLPHNKL 161 Query: 178 LSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 +M AR +D F V+ + +G E FIE++ + ++V+ V +++ + Sbjct: 162 AAMIARNAKVVGTTDNF-AVVFAAIGITFEESNFFIEEFKKSGAIDRTVMFVNLANDPAV 220 Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + + D +VL+I+ IT +A S+REI+ E+P RGYP +++ Sbjct: 221 ERIATPRMAITAAEYLAYELDMHVLIIMTDITNYAESLREISAARKEVPGRRGYPGYMYT 280 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L L ER G + +KG+IT + + + D+ PI D I +G ++L+RSL ++G Sbjct: 281 DLSSLYERAGRVKGKKGSITQLPILTMPEDDKTHPIPDLTGYITEGQVILSRSLHQKGIQ 340 Query: 349 PPVDPLASVSRLADKA 364 PPVD L S+SRL DK Sbjct: 341 PPVDVLPSLSRLKDKG 356 >gi|75908515|ref|YP_322811.1| F0F1 ATP synthase subunit beta [Anabaena variabilis ATCC 29413] gi|118573506|sp|Q3MAS0|ATPB_ANAVT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|75702240|gb|ABA21916.1| ATP synthase F1 subcomplex beta subunit [Anabaena variabilis ATCC 29413] Length = 482 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + ++ I P + F+TGI+V+D+ TP Sbjct: 95 ATLGRIFNVLGEPVDNRGPVNNQE-TLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210 G +IG+F G+G+GK+ ++ + +S+ VGER RE E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DNL +S +V +E P R L+ +T+AEYF +VLL +D+I RF + Sbjct: 214 KDNLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ +L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + DE ++ + R++E Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|284931521|gb|ADC31459.1| ATP synthase F1 subunit beta [Mycoplasma gallisepticum str. F] Length = 471 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+PID + M I P ++ + F+TGI+VID+ P G Sbjct: 90 LGRMFNVIGEPIDEKKPIDASVKRMSIHRPAPSFADQSNELEIFETGIKVIDLLIPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + +S+ VGER RE + + E G + K+ Sbjct: 150 GKIGLFGGAGVGKTVLVQELIHNIATGHGGLSVFAGVGERTREGNDLYYEMIEGGVIDKT 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +VLL +D+I RF + E++ G + Sbjct: 210 ALVFGQMNEPPGARMRVALTGLTMAEYFRDVNNQDVLLFIDNIFRFTQAGSEVSALLGRM 269 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + + G+IT+V ++ V D+ DP + + LD Sbjct: 270 PSAVGYQPTLAEEMGSLQERI--TSTKSGSITSVQAIYVPADDLTDPAPSTTFTHLDAKT 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R++A G +P V+PL S SRL D + + + ++ +F E +DI I G Sbjct: 328 VLDRNVASLGIFPAVNPLDSTSRLLDPSVVGIQHYQTARKVQMILQKFLELQDIIAILG 386 >gi|156839682|ref|XP_001643529.1| hypothetical protein Kpol_1008p8 [Vanderwaltozyma polyspora DSM 70294] gi|156114144|gb|EDO15671.1| hypothetical protein Kpol_1008p8 [Vanderwaltozyma polyspora DSM 70294] Length = 504 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 106/311 (34%), Positives = 167/311 (53%), Gaps = 28/311 (9%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR+IN +G+PID +G ++ ++ + PP+ Q E + +TGI+V+D+ P Sbjct: 118 LGRIINVIGEPIDE-----RGPINSKLRKPIHAEPPSFVEQSTEAEVLETGIKVVDLLAP 172 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE-- 207 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E Sbjct: 173 YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMRETG 231 Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 + GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF Sbjct: 232 VINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQ 289 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP Sbjct: 290 AGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPA 347 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRF 383 + + LD VL+R ++E G YP VDPL S SRL D A E V++ + + + Sbjct: 348 PATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATRVQETLQAY 407 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 408 KSLQDIIAILG 418 >gi|92116150|ref|YP_575879.1| F0F1 ATP synthase subunit beta [Nitrobacter hamburgensis X14] gi|118573706|sp|Q1QQS8|ATPB_NITHX RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|91799044|gb|ABE61419.1| ATP synthase F1 subcomplex beta subunit [Nitrobacter hamburgensis X14] Length = 476 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 157/304 (51%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + D+ I + P ++ + TGI+V+D+ P G Sbjct: 90 GRIMNVIGEPVDEQGPVKAEDMRA-IHQEAPLYTDQSTEAEILVTGIKVVDLLAPYAKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL----G 211 +IG+F G+G+GK+ L+ + + + VGER RE EFIE + G Sbjct: 149 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEFIESGVNKKGG 208 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R L+ +T+AE+F +G +VL +D+I RF + E++ Sbjct: 209 GEGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEVSA 268 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +++ L ERI + KG+IT++ ++ V D+ DP + + Sbjct: 269 LLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSIQAIYVPADDLTDPAPATSFAH 326 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIR 390 LD LNR+++E+G YP VDPL S SR+ +E + + ++ R++ +DI Sbjct: 327 LDATTTLNRAISEKGIYPAVDPLDSTSRMLSPLIVGEEHYQTARMVQQVLQRYKSLQDII 386 Query: 391 LIGG 394 I G Sbjct: 387 AILG 390 >gi|285019666|ref|YP_003377377.1| ATP synthase subunit beta [Xanthomonas albilineans GPE PC73] gi|283474884|emb|CBA17383.1| probable atp synthase , beta subunit protein [Xanthomonas albilineans] Length = 468 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGEVQATD-HWEIHRAAPTYEDQSSATELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHAGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF S KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD +VL+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDATVVLSRNIASLGIYPAVDPLDSTSRQLDPNVIGHEHYDTARRVQSTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|212715311|ref|ZP_03323439.1| hypothetical protein BIFCAT_00204 [Bifidobacterium catenulatum DSM 16992] gi|212661768|gb|EEB22343.1| hypothetical protein BIFCAT_00204 [Bifidobacterium catenulatum DSM 16992] Length = 493 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 151/269 (56%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 140 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 199 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 200 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 259 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 260 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 317 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 318 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 377 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 378 GQAHYECANRVKAILQRNKELQDIIALIG 406 >gi|325963826|ref|YP_004241732.1| ATP synthase, F1 subunit beta [Arthrobacter phenanthrenivorans Sphe3] gi|323469913|gb|ADX73598.1| ATP synthase, F1 beta subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 484 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG+P+D +S + I K P + + + +TGI+VID+ TP G Sbjct: 103 GHIFNVLGQPLDVAESELEISERWPIHRKAPSFASLEGSTEMLETGIKVIDLLTPYIKGG 162 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVLKDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ ++ V D++ DP + + LD Sbjct: 283 SAVGYQPNLADEMGLLQERITSTKGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR+ D + D + ++ + +E +DI I G Sbjct: 341 LSREIASRGLYPAVDPLTSTSRILDPQYIGKDHYNTAVRVKQILQKNKELQDIIAILG 398 >gi|307133303|ref|YP_003885319.1| F1 sector of membrane-bound ATP synthase, subunit beta [Dickeya dadantii 3937] gi|306530832|gb|ADN00763.1| F1 sector of membrane-bound ATP synthase, beta subunit [Dickeya dadantii 3937] Length = 460 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEELSNSQELLETGIKVIDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VTLSRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|306992006|pdb|3OEH|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Beta-V279f gi|306992007|pdb|3OEH|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Beta-V279f gi|306992008|pdb|3OEH|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Beta-V279f gi|306992015|pdb|3OEH|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Beta-V279f gi|306992016|pdb|3OEH|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Beta-V279f gi|306992017|pdb|3OEH|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Beta-V279f gi|306992024|pdb|3OEH|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Beta-V279f gi|306992025|pdb|3OEH|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Beta-V279f gi|306992026|pdb|3OEH|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Beta-V279f Length = 484 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 98 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 156 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 157 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 214 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 215 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 274 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 275 SALLGRIPSAFGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 332 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 333 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 392 Query: 389 IRLIGG 394 I I G Sbjct: 393 IIAILG 398 >gi|198285477|gb|ACH85277.1| ATP synthase H+ transporting mitochondrial F1 complex beta [Salmo salar] Length = 495 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 163/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 99 IRIPVGPETLGRIMNVIGEPIDERGPISTKQ-TAAIHAEAPEFTDMSVEQEILVTGIKVV 157 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 158 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 216 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 217 MIESGVINLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 276 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 277 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 334 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 335 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAEHYDVARGVQKI 394 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 395 LQDYKSLQDIIAILG 409 >gi|89574029|gb|ABD77240.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Homo sapiens] Length = 445 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 77 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 135 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 136 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 194 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 195 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 254 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 255 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 312 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 313 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 372 Query: 389 IRLIGG 394 I I G Sbjct: 373 IIAILG 378 >gi|142006|gb|AAA21993.1| ATPase beta-subunit [Anabaena sp.] Length = 471 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 93/300 (31%), Positives = 155/300 (51%), Gaps = 11/300 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + ++ I P + F+TGI+V+D+ TP Sbjct: 95 ATLGRIFNVLGEPVDNRGPVNNQE-TLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKK 216 G +IG+F G+G+GK+ ++ + +S+ VGER RE + + + K Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMID---SK 210 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AEYF +VLL +D+I RF + E++ G Sbjct: 211 NALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGR 270 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +++ +L ERI + +G+IT++ +V V D+ DP + + LDG Sbjct: 271 MPSAVGYQPTLGTDVGQLQERI--TSTTEGSITSIQAVYVPADDLTDPAPATTFAHLDGT 328 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R LA +G YP VDPL S S + DE ++ + R++E +DI I G Sbjct: 329 TVLSRGLASKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKELQDIIAILG 388 >gi|260551344|ref|ZP_05825545.1| membrane-bound ATP synthase F1 sector [Acinetobacter sp. RUH2624] gi|260405658|gb|EEW99149.1| membrane-bound ATP synthase F1 sector [Acinetobacter sp. RUH2624] Length = 464 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + + I + P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRDVLLFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD +VL+R +A G YP +DPL S SR D E ++ ++ +++ R++E + Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARAVQNVLQRYKELK 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|240127359|ref|ZP_04740020.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|268685732|ref|ZP_06152594.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|268626016|gb|EEZ58416.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-93-1035] Length = 465 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 109/333 (32%), Positives = 168/333 (50%), Gaps = 23/333 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPIDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ + S VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHS-GLSVFSGVGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I G+D + D+ AV + I FL Q Sbjct: 379 IAI----LGMDELSDEDKLAVMRARKIQRFLSQ 407 >gi|239637396|ref|ZP_04678378.1| ATP synthase F1, beta subunit [Staphylococcus warneri L37603] gi|239596996|gb|EEQ79511.1| ATP synthase F1, beta subunit [Staphylococcus warneri L37603] gi|330684792|gb|EGG96485.1| ATP synthase F1, beta subunit [Staphylococcus epidermidis VCU121] Length = 470 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 95/301 (31%), Positives = 162/301 (53%), Gaps = 12/301 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+ ID ++ + + + + + P + E + +TGI+V+D+ P Sbjct: 89 LGRVFNVLGETIDLEEKIDDS-VRRDPIHRQSPGFDELSTEVEILETGIKVVDLLAPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LK 215 G ++G+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ +K Sbjct: 148 GGKVGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYE-MSDSGVIK 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 207 KTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLDS 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 L R L E G YP VDPLAS SR + + E ++ + + ++ E +DI I Sbjct: 325 TTNLERKLTEMGIYPAVDPLASTSRALEPSIVGQEHYEVARGVQSTLQKYRELQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|34447120|dbj|BAC84975.1| mitochondrial ATPase beta-subunit [Zygosaccharomyces rouxii] Length = 506 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 112/353 (31%), Positives = 182/353 (51%), Gaps = 30/353 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I ++ P +++ + +TGI+V+D+ P G Sbjct: 120 LGRIINVIGEPIDEAGPINTKE-RRPIHAEPPSFVDQSTNSEVLETGIKVVDLLAPYARG 178 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE +E D Sbjct: 179 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMMETGVIDL 237 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 238 KGDS--KVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSE 295 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A Y ++ +++ L ERI ++K G++T+V +V V D+ DP + Sbjct: 296 VSALLGRIPSAVAYQPTLSTDMGALQERIATTQK--GSVTSVQAVYVPADDLTDPAPATT 353 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D + +E + S + + ++ + Sbjct: 354 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASIVGEEHYNIASDVQMTLQAYKSLQ 413 Query: 388 DIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 DI I G+D + ++ V + I FL Q ++ VF I KL Sbjct: 414 DIIAI----LGMDELSEQDKLTVERARKIQRFLSQP---FATAQVFTGIEGKL 459 >gi|269118842|ref|YP_003307019.1| ATP synthase F1 subunit beta [Sebaldella termitidis ATCC 33386] gi|268612720|gb|ACZ07088.1| ATP synthase F1, beta subunit [Sebaldella termitidis ATCC 33386] Length = 465 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D ++ K + I + P + + +TGI+V+D+ P G Sbjct: 86 LGRIFNVLGEVVDKGPAV-KTEEYHSIHREAPSFEEQGTGTEILETGIKVVDLLAPYLKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + +S+ VGER RE R+ + + K+ Sbjct: 145 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGRDLYNEMKESGVIDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 ++ +E P R LTA+T+AEYF + G +VLL +D+I RF + E++ G + Sbjct: 205 ALIYGQMNEPPGARLRVGLTALTMAEYFRDREGQDVLLFIDNIFRFTQAGSEVSALLGRM 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + S LD Sbjct: 265 PSAVGYQPNLATEMGTLQERI--TSTKKGSITSVQAVYVPADDFTDPAPATTFSHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS++ G YP VDPL S SR L + + + L+ R++E +DI I G Sbjct: 323 VLSRSISSLGIYPAVDPLESTSRILEPEIVGVEHYNTAREVQRLLQRYKELQDIIAILG 381 >gi|126436438|ref|YP_001072129.1| F0F1 ATP synthase subunit beta [Mycobacterium sp. JLS] gi|190358684|sp|A3Q3B1|ATPB_MYCSJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|126236238|gb|ABN99638.1| ATP synthase F1, beta subunit [Mycobacterium sp. JLS] Length = 517 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 163/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG +D D GK D + + PPA + R E +TG++V+D+ TP Sbjct: 103 GHVFNALGACLD-DPGYGK-DFEKWSIHRKPPAFDELEPRTEM-LETGLKVVDLLTPYVR 159 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 G +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK Sbjct: 160 GGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKD 219 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF K +VLL +D+I RF + E++T G Sbjct: 220 TALVFGQMDEPPGTRMRVALSALTMAEYFRDEKQQDVLLFIDNIFRFTQAGSEVSTLLGR 279 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 280 MPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDAT 337 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ +G +P VDPLAS S + D + DE ++ + ++ R+++ +DI I G Sbjct: 338 TELSRSVFSKGIFPAVDPLASSSTILDPSVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 397 >gi|145218847|ref|YP_001129556.1| F0F1 ATP synthase subunit beta [Prosthecochloris vibrioformis DSM 265] gi|189081338|sp|A4SC45|ATPB_PROVI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|145205011|gb|ABP36054.1| ATP synthase F1 subcomplex beta subunit [Chlorobium phaeovibrioides DSM 265] Length = 462 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G PIDG + + I P + + F+TGI+VID+ P G Sbjct: 86 LGRMLNVVGDPIDGRGPV-DAKKTYSIHRSAPKFEDLSTKAEMFETGIKVIDLLEPYSRG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ + + + + VGER RE + + + + K+ Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT ++IAEYF + + +VLL +D+I RF + E++ G + Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRM 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L +RI + + G++T+V ++ V D+ DP + + LD Sbjct: 265 PSAVGYQPTLATEMGELQDRI--TSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D D+ ++ ++ R+++ +DI I G Sbjct: 323 VLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKMILQRYKDLQDIIAILG 381 >gi|257064827|ref|YP_003144499.1| ATP synthase, F1 beta subunit [Slackia heliotrinireducens DSM 20476] gi|256792480|gb|ACV23150.1| ATP synthase, F1 beta subunit [Slackia heliotrinireducens DSM 20476] Length = 485 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 94/297 (31%), Positives = 156/297 (52%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+P+D + + + M I P + F+TGI+ ID+ P G Sbjct: 106 GRIWNVIGEPVD-EKPMPEVAGYMPIHRPAPEYDTLSTKTEIFETGIKAIDLIEPFIRGG 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ ++ + + + + VGER RE + ++E + K+ Sbjct: 165 KTGLFGGAGVGKTVIIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMSESGVINKTC 224 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R L +T AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 225 LVYGQMNEPPGARLRVGLAGLTEAEYFRDQGQDVLLFVDNIFRFTQAGSEVSALLGRMPS 284 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD VL Sbjct: 285 AVGYQPTLATEMGDLQERI--TSTSAGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 342 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +RS+AE G YP VDPL S SR + A +E ++ + + L+ +++ +DI I G Sbjct: 343 SRSIAELGIYPAVDPLESTSRALEPAIVGEEHYRVATGIQELLQNYKDLQDIIAILG 399 >gi|34500000|gb|AAQ73582.1| ATP synthase beta subunit [Mannheimia haemolytica] Length = 444 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQANSTXLLETGIKVIDLVAPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376 >gi|212703958|ref|ZP_03312086.1| hypothetical protein DESPIG_02011 [Desulfovibrio piger ATCC 29098] gi|212672661|gb|EEB33144.1| hypothetical protein DESPIG_02011 [Desulfovibrio piger ATCC 29098] Length = 473 Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 158/304 (51%), Gaps = 15/304 (4%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR++N +G+P+D +G + I P + + +TGI+V+D+ P Sbjct: 89 AAVGRILNVIGRPVD---EMGPVNAEKYYPIHRPAPEFTEQNTKVELLETGIKVVDLLVP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL-GD 212 G ++G+F G+G+GK+ +L + A+ V VGER RE + + Sbjct: 146 FPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGSSVFAG-VGERTREGNDLYNELKEAG 204 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 L+++ +V +E P R LTA+ AEYF + +VLL +D+I RF + E++ Sbjct: 205 VLERATLVYGQMNEPPGARARVALTALACAEYFRDEENQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + S Sbjct: 265 LLGRMPSAVGYQPTLGTDLGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFSH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDIR 390 LDG +VL+R +AE G YP VDPL S SR+ D +E V+ ++ +++E +DI Sbjct: 323 LDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGEEHYSVARQVQMVLQKYKELQDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|319760158|ref|YP_004124096.1| ATP synthase subunit beta [Candidatus Blochmannia vafer str. BVAF] gi|318038872|gb|ADV33422.1| ATP synthase subunit beta [Candidatus Blochmannia vafer str. BVAF] Length = 467 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 100/297 (33%), Positives = 155/297 (52%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID S+ K I P ++ TGI+VID+ P G Sbjct: 93 GRIMNVLGEPIDKKGSI-KTIERRSIHQFSPLYHELSTNQELLVTGIKVIDLMCPFIKGG 151 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKKSV 218 +IG+F G+G+GK+ + R+ + S+ VGER RE +F + + D + K Sbjct: 152 KIGLFGGAGVGKTVNIMELIRNIAVEHSGYSVFVGVGERTREGNDFYHEMIHSDIINKVA 211 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +TIAE F G NVLL +D+I R+ + E++ G +P Sbjct: 212 LVYGQMNEPPGNRFRVALTGLTIAEKFRDDGYNVLLFIDNIYRYTLAGTEVSALLGRVPS 271 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY +++ E+ L ERI + + G IT+V ++ V D+ DP + + LD IVL Sbjct: 272 AVGYQSTLSEEMGMLQERIAST--KSGAITSVQAIYVPADDLTDPSPTTTFAHLDATIVL 329 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPL S S+ D E + +++ ++ R++E +DI I G Sbjct: 330 SRQIAALGIYPAVDPLDSHSQQLDPFIVGQEHYDVANAVRSILQRYQELKDIIAILG 386 >gi|242241387|ref|YP_002989568.1| F0F1 ATP synthase subunit beta [Dickeya dadantii Ech703] gi|242133444|gb|ACS87746.1| ATP synthase F1, beta subunit [Dickeya dadantii Ech703] Length = 460 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG P+D +G+ + I P + ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGDPVDMKGPIGEEE-RWSIHRAAPSYEDLSNSQELLETGIKVIDLICPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDST 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 VTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILG 379 >gi|311070200|ref|YP_003975123.1| F0F1 ATP synthase subunit beta [Bacillus atrophaeus 1942] gi|310870717|gb|ADP34192.1| F0F1 ATP synthase subunit beta [Bacillus atrophaeus 1942] Length = 473 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+ ID ++ L + + + + P+ ++ E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGENIDLNEPLA-ANTEKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + F E + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ Sbjct: 209 NKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDVQGQDVLFFIDNIYRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR LA + + + + + R++E +DI I Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|255965392|gb|ACU45001.1| ATP synthase beta [Pfiesteria piscicida] Length = 427 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 153/308 (49%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+PID LG D I P + TGI+V+D+ P Sbjct: 37 LGRIINIIGEPID---ELGPIDTKKYYAIHRPTPTFTEMNTTAQQLLTGIKVVDLLAPYA 93 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ ++ + + + VGER RE + + + + Sbjct: 94 KGGKIGLFGGAGVGKTVVIMELIHNIALKHGGYSVFAGVGERTREGNDLYHEMMASGVIK 153 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 154 KDKAPGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDEEGQDVLLFVDNIFRFTQAGS 213 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ ++L L ERI + +KG+IT+V +V V D+ DP + Sbjct: 214 EVSALLGRIPSAVGYQPTLATDLASLQERI--TTTQKGSITSVQAVYVPADDLTDPAPAT 271 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R +AE G YP VDPL S SR+ D + + S ++ ++ Sbjct: 272 TFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDASIVGQRHYDIARSTQKILQDYKSL 331 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 332 QDIIAILG 339 >gi|239817829|ref|YP_002946739.1| F0F1 ATP synthase subunit beta [Variovorax paradoxus S110] gi|239804406|gb|ACS21473.1| ATP synthase F1, beta subunit [Variovorax paradoxus S110] Length = 466 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 105/310 (33%), Positives = 161/310 (51%), Gaps = 21/310 (6%) Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+++ LG+PID GD S DL+ I K P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDERGDVSQ---DLTASIHRKAPAYDELSPSQDLLETGIKVIDLVCP 137 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSG 196 Query: 213 --NLKK-----SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 NL+K +V +E P R LT +TIAE F +G +VL +D+I R+ + Sbjct: 197 VVNLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLA 256 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP Sbjct: 257 GTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSP 314 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD +VL+R +A G YP VDPL S SR D +E V+ ++ + R++ Sbjct: 315 ATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEEHYNVARAVQGTLQRYK 374 Query: 385 ETRDIRLIGG 394 E RDI I G Sbjct: 375 ELRDIIAILG 384 >gi|218135023|ref|ZP_03463827.1| hypothetical protein BACPEC_02928 [Bacteroides pectinophilus ATCC 43243] gi|217990408|gb|EEC56419.1| hypothetical protein BACPEC_02928 [Bacteroides pectinophilus ATCC 43243] Length = 465 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG IDG + L D + + + PP Q V + +TGI+VID+ P G Sbjct: 87 GRLFNVLGDTIDGGEKLD--DETHWSIHREPPTFEDQSPVVEMLETGIKVIDLLAPYAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ + ++ I + VGER RE + + E L K+ Sbjct: 145 GKIGLFGGAGVGKTVLIQELIHNIATERGGYSIFTGVGERSREGNDLWTEMKESGVLDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 205 ALVFGQMNEPPGARMRVAETGLTMAEYFRDVKHQDVLLFIDNIFRFVQAGSEVSALLGRM 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 265 PSAVGYQPTLANDVGELQERIASTKD--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E V+ + ++ +++E +DI I G Sbjct: 323 VLSRKIVEQGIYPAVDPLESSSRILEADVVGEEHYNVARRVQAILQKYKELQDIIAILG 381 >gi|195019846|ref|XP_001985067.1| GH16852 [Drosophila grimshawi] gi|193898549|gb|EDV97415.1| GH16852 [Drosophila grimshawi] Length = 659 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 107/318 (33%), Positives = 166/318 (52%), Gaps = 25/318 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGI 149 R++ GR++N +G PID +G++ E S + PP + V+ + TGI Sbjct: 195 RVAVGKSVLGRIVNVVGDPIDE-----RGEIKSEFYSFIHNEPPDLQELSVKPEVLVTGI 249 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE---- 201 +VID+ P G +IG+F G+G+GK+ L+ + A+S V + GER RE Sbjct: 250 KVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDL 308 Query: 202 VREFIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILD 257 E IE L D+ K +V +E P R LT +TIAEYF +G +VLL +D Sbjct: 309 YYEMIESKVISLDDDTSKVALVYGQMNEPPGARNRVVLTGLTIAEYFRDIEGQDVLLFID 368 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + E++ G +P A GY ++ +++ + ERI S + G+IT+V +V V Sbjct: 369 NIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGAMQERI--SSTKNGSITSVQAVYVPA 426 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSL 376 D+ +DP + S LD VL+R +AE G YP VDPL S SR+ D + D + ++ Sbjct: 427 DDLSDPAPSATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRVLDPEVVGEDHYNVARAV 486 Query: 377 THLIHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 487 QKTLQGYKSLQDIIAILG 504 >gi|303244849|ref|ZP_07331177.1| H(+)-transporting two-sector ATPase [Methanothermococcus okinawensis IH1] gi|302484799|gb|EFL47735.1| H(+)-transporting two-sector ATPase [Methanothermococcus okinawensis IH1] Length = 462 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 161/314 (51%), Gaps = 25/314 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 +I S GR+ N GKPIDG + K D++ ++ V +R+ +TGI Sbjct: 83 KIGVSPEMLGRIFNGAGKPIDGGPEIIPEKKLDINGYPLNPV----SRRNPNDFVQTGIS 138 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVR 203 ID L GQ++ +F+GSG+ + L + AR + F V+ + +G E Sbjct: 139 TIDGTNTLVRGQKLPIFSGSGLPHNLLAAQIARQAKVRGEGEQF-AVVFAAMGITAEEAN 197 Query: 204 EFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITR 261 F+E++ L+K+VV + +D+ I R + P A+T AEY + KG +VL+IL IT Sbjct: 198 YFMEEFKRTGALEKAVVYINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDITN 257 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 + ++REIA E+P RGYP ++++L L ER G + +G +T + + + D+ Sbjct: 258 YCEALREIAAARNEVPGRRGYPGYMYTDLATLYERAGRVKGREGTVTQIPILTMPHDDIT 317 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSL 376 PI D I +G IVL+R L +G YPPVD L S+SRLA D K++S Sbjct: 318 HPIPDLTGYITEGQIVLSRELNRKGIYPPVDVLPSLSRLAGNGQGEGKTREDHSKVIS-- 375 Query: 377 THLIHRFEETRDIR 390 + + E R +R Sbjct: 376 -QVYAAYAEGRSLR 388 >gi|167626199|ref|YP_001676493.1| F0F1 ATP synthase subunit beta [Shewanella halifaxensis HAW-EB4] gi|189081345|sp|B0TQF4|ATPB_SHEHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|167356221|gb|ABZ78834.1| ATP synthase F1, beta subunit [Shewanella halifaxensis HAW-EB4] Length = 458 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 99/303 (32%), Positives = 162/303 (53%), Gaps = 12/303 (3%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 + GR++N LG PID +G+ + + I + P ++ + +TGI+VID+ P Sbjct: 80 SATLGRIMNVLGDPIDECGEIGEQERYV-IHREAPSYEDQSSSTELLETGIKVIDLVCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + + D+ Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYE-MKDSG 196 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ Sbjct: 197 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTEVSAL 256 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + L Sbjct: 257 LGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHL 314 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D +VL+R++A G YP VDPL S SR D E + S + ++ R++E +DI Sbjct: 315 DATVVLSRNIASMGIYPAVDPLDSTSRQLDPLVVGQEHYDVASGVQTVLQRYKELKDIIA 374 Query: 392 IGG 394 I G Sbjct: 375 ILG 377 >gi|146185860|ref|XP_001032631.2| ATP synthase beta chain, mitochondrial precursor, putative [Tetrahymena thermophila] gi|146142891|gb|EAR84968.2| ATP synthase beta chain, mitochondrial precursor, putative [Tetrahymena thermophila SB210] Length = 497 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + L I P ++ + TGI+V+D+ P G Sbjct: 111 GRIMNVIGEPIDQRGPIKAAKL-YPIHRDAPSFTDQATSAEILVTGIKVVDLLAPYARGG 169 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ L+ + + + VGER RE + + + + Sbjct: 170 KIGLFGGAGVGKTVLIQELINNVAKHHGGYSVFAGVGERTREGNDLYHEMMDSKVISVKE 229 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 + ++ +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 230 GESRCALIFGQMNEPPGARARVGLTGLTVAEYFRDEEGKDVLLFVDNIFRFTQACSEVSA 289 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 290 LLGRIPSAVGYQPTLATDLGALQERI--TTTQKGSITSVQAIYVPADDLTDPAPATTFAH 347 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD VLNR L E G YP VDPL S SR+ D +E V+ + L+ ++ +DI Sbjct: 348 LDATTVLNRGLTELGIYPAVDPLDSTSRMLDPITIGEEHYTVARGVQKLLQDYKSLQDII 407 Query: 391 LIGG 394 I G Sbjct: 408 AILG 411 >gi|146284502|ref|YP_001174655.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri A1501] gi|166201728|sp|A4VS62|ATPB_PSEU5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|145572707|gb|ABP81813.1| ATP synthase beta chain [Pseudomonas stutzeri A1501] gi|327482891|gb|AEA86201.1| F0F1 ATP synthase subunit beta [Pseudomonas stutzeri DSM 4166] Length = 458 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + I P + + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDEAGPIGEEE-RWTIHRAAPSYSEQAGGNELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 202 ALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKNGSITSVQAVYVPADDLTDPSPATTFAHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E + +++ R++E +DI I G Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTARGVQYVLQRYKELKDIIAILG 377 >gi|80091|pir||S17726 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain - Bacillus firmus (strain OF4) Length = 469 Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 99/330 (30%), Positives = 169/330 (51%), Gaps = 15/330 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID + + I + P + +TGI+V+D+ P Sbjct: 89 ATLGRVFNVLGEAIDLGEPVAADVKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYI 148 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + +IS+ VGER RE + + +K Sbjct: 149 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGVISVFAGVGERTREGNDLYHEMTDSGVIK 208 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L+ +T+AE+F + G +VLL +D+I RF + E++ G Sbjct: 209 KTAMVFGQMNEPPGARMRVALSGLTMAEHFRDRDGQDVLLFVDNIFRFTQAGSEVSALLG 268 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + + G++T++ ++ V D++ DP + + LD Sbjct: 269 RMPSAVGYQPTLATEMGHLQERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 326 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR L+ + + + + + +++E +DI I Sbjct: 327 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAI- 385 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ I FL Q+ Sbjct: 386 ---LGMDELSEEDKLVVHRARRIQFFLSQN 412 >gi|224510811|pdb|3FKS|D Chain D, Yeast F1 Atpase In The Absence Of Bound Nucleotides gi|224510812|pdb|3FKS|E Chain E, Yeast F1 Atpase In The Absence Of Bound Nucleotides gi|224510813|pdb|3FKS|F Chain F, Yeast F1 Atpase In The Absence Of Bound Nucleotides gi|224510820|pdb|3FKS|M Chain M, Yeast F1 Atpase In The Absence Of Bound Nucleotides gi|224510821|pdb|3FKS|N Chain N, Yeast F1 Atpase In The Absence Of Bound Nucleotides gi|224510822|pdb|3FKS|O Chain O, Yeast F1 Atpase In The Absence Of Bound Nucleotides gi|224510829|pdb|3FKS|V Chain V, Yeast F1 Atpase In The Absence Of Bound Nucleotides gi|224510830|pdb|3FKS|W Chain W, Yeast F1 Atpase In The Absence Of Bound Nucleotides gi|224510831|pdb|3FKS|X Chain X, Yeast F1 Atpase In The Absence Of Bound Nucleotides gi|306991952|pdb|3OE7|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Gamma-I270t gi|306991953|pdb|3OE7|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Gamma-I270t gi|306991954|pdb|3OE7|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Gamma-I270t gi|306991961|pdb|3OE7|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Gamma-I270t gi|306991962|pdb|3OE7|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Gamma-I270t gi|306991963|pdb|3OE7|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Gamma-I270t gi|306991970|pdb|3OE7|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Gamma-I270t gi|306991971|pdb|3OE7|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Gamma-I270t gi|306991972|pdb|3OE7|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Gamma-I270t gi|306991979|pdb|3OEE|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-F405s gi|306991980|pdb|3OEE|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-F405s gi|306991981|pdb|3OEE|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-F405s gi|306991988|pdb|3OEE|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-F405s gi|306991989|pdb|3OEE|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-F405s gi|306991990|pdb|3OEE|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-F405s gi|306991997|pdb|3OEE|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-F405s gi|306991998|pdb|3OEE|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-F405s gi|306991999|pdb|3OEE|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-F405s gi|306992033|pdb|3OFN|D Chain D, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-N67i gi|306992034|pdb|3OFN|E Chain E, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-N67i gi|306992035|pdb|3OFN|F Chain F, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-N67i gi|306992042|pdb|3OFN|M Chain M, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-N67i gi|306992043|pdb|3OFN|N Chain N, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-N67i gi|306992044|pdb|3OFN|O Chain O, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-N67i gi|306992051|pdb|3OFN|V Chain V, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-N67i gi|306992052|pdb|3OFN|W Chain W, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-N67i gi|306992053|pdb|3OFN|X Chain X, Structure Of Four Mutant Forms Of Yeast F1 Atpase: Alpha-N67i Length = 484 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 98 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 156 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 157 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 214 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 215 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 274 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 275 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 332 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 333 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 392 Query: 389 IRLIGG 394 I I G Sbjct: 393 IIAILG 398 >gi|119389907|pdb|2HLD|D Chain D, Crystal Structure Of Yeast Mitochondrial F1-Atpase gi|119389908|pdb|2HLD|E Chain E, Crystal Structure Of Yeast Mitochondrial F1-Atpase gi|119389909|pdb|2HLD|F Chain F, Crystal Structure Of Yeast Mitochondrial F1-Atpase gi|119389916|pdb|2HLD|M Chain M, Crystal Structure Of Yeast Mitochondrial F1-Atpase gi|119389917|pdb|2HLD|N Chain N, Crystal Structure Of Yeast Mitochondrial F1-Atpase gi|119389918|pdb|2HLD|O Chain O, Crystal Structure Of Yeast Mitochondrial F1-Atpase gi|119389925|pdb|2HLD|V Chain V, Crystal Structure Of Yeast Mitochondrial F1-Atpase gi|119389926|pdb|2HLD|W Chain W, Crystal Structure Of Yeast Mitochondrial F1-Atpase gi|119389927|pdb|2HLD|X Chain X, Crystal Structure Of Yeast Mitochondrial F1-Atpase gi|300193118|pdb|2WPD|D Chain D, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase gi|300193119|pdb|2WPD|E Chain E, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase gi|300193120|pdb|2WPD|F Chain F, The Mg.Adp Inhibited State Of The Yeast F1c10 Atp Synthase Length = 478 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 92 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 150 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 151 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 208 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 209 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 268 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 269 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 326 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 327 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 386 Query: 389 IRLIGG 394 I I G Sbjct: 387 IIAILG 392 >gi|38906103|gb|AAR27804.1| ATP synthase beta chain [Bifidobacterium dentium] Length = 373 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 93/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I + L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326 >gi|15425560|emb|CAC60400.1| ATP synthase beta subunit [Brunonia australis] Length = 477 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P +N F+TGI+V+D+ Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFINLDTKLSIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + +S+ VGER RE + ++ Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESG 216 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 217 VINEENFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 334 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE ++ + + R+ Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYEIAQQVKQTLQRY 394 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 395 KELQDIIAILG 405 >gi|332186743|ref|ZP_08388485.1| ATP synthase F1, beta subunit [Sphingomonas sp. S17] gi|332013076|gb|EGI55139.1| ATP synthase F1, beta subunit [Sphingomonas sp. S17] Length = 490 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 101/335 (30%), Positives = 165/335 (49%), Gaps = 22/335 (6%) Query: 79 EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 E ++ G V G + ++ GR++N +G+PID + DL I +K P + Sbjct: 74 EGLTRGQTVTDTGNQIQVPVGPATLGRILNVVGEPIDERGPVAT-DLRAPIHAKAPEFIE 132 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISL 194 + TGI+VID+ P G +IG+F G+G+GK+ L+ + + + Sbjct: 133 QSTESAILVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAG 192 Query: 195 VGERGREVREFIEDYLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTI 241 VGER RE + ++L + K +V +E P R L+ + I Sbjct: 193 VGERTREGNDLYHEFLDAGVIAKDAEGNAISEGSKVALVYGQMNEPPGARARVALSGLAI 252 Query: 242 AEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 AEYF +G +VL +D+I RF + E++ G +P A GY ++ +++ L ERI + Sbjct: 253 AEYFRDQEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--T 310 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 KG+IT+V +V V D+ DP + + LD VLNR+++E G YP VDPL S SR+ Sbjct: 311 STNKGSITSVQAVYVPADDLTDPAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRV 370 Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + E + ++ L+ R++ +DI I G Sbjct: 371 LEPRIVGQEHYETARAVQSLLQRYKALQDIIAILG 405 >gi|323304290|gb|EGA58064.1| Atp2p [Saccharomyces cerevisiae FostersB] Length = 511 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419 Query: 389 IRLIGG 394 I I G Sbjct: 420 IIAILG 425 >gi|219871749|ref|YP_002476124.1| F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase, F(1) subunit beta [Haemophilus parasuis SH0165] gi|254808153|sp|B8F774|ATPB_HAEPS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|219691953|gb|ACL33176.1| F0F1 ATP synthase subunit beta/H(+)-transporting two-sector ATPase, F(1) beta subunit [Haemophilus parasuis SH0165] Length = 457 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEEQANSTELLETGIKVIDLIAPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQKTLQRYKELKDIIAILG 376 >gi|126739852|ref|ZP_01755543.1| F0F1 ATP synthase subunit beta [Roseobacter sp. SK209-2-6] gi|126719084|gb|EBA15795.1| F0F1 ATP synthase subunit beta [Roseobacter sp. SK209-2-6] Length = 474 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 163/311 (52%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR++N +G+P+D + + + + P N Q E TGI+VID+ P Sbjct: 84 ATLGRILNVVGEPVDEKGPVNATE--TRAIHQPAPEFNDQSTESEVLVTGIKVIDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVR----EFIEDY 209 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 142 SKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYWEMIESN 199 Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264 + DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF Sbjct: 200 VIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQ 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V D+ DP Sbjct: 260 AGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPA 317 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRF 383 + + LD VLNR+++E G YP VDPL S SRL D +E V+S + ++ R+ Sbjct: 318 PATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEEHYAVASDVQQILQRY 377 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 378 KSLQDIIAILG 388 >gi|162286755|ref|YP_001083240.2| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ATCC 17978] gi|169632167|ref|YP_001705903.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii SDF] gi|169797644|ref|YP_001715437.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AYE] gi|184156498|ref|YP_001844837.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii ACICU] gi|213155562|ref|YP_002317607.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB0057] gi|215484998|ref|YP_002327239.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB307-0294] gi|239503042|ref|ZP_04662352.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB900] gi|260557587|ref|ZP_05829801.1| ATP synthase F1, beta subunit [Acinetobacter baumannii ATCC 19606] gi|301345728|ref|ZP_07226469.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB056] gi|301512770|ref|ZP_07238007.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB058] gi|301594499|ref|ZP_07239507.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii AB059] gi|332852654|ref|ZP_08434308.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013150] gi|332869370|ref|ZP_08438748.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013113] gi|332875632|ref|ZP_08443444.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6014059] gi|190358287|sp|A3M144|ATPB_ACIBT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226739963|sp|B7H294|ATPB_ACIB3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226739964|sp|B7I1W4|ATPB_ACIB5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226739965|sp|B2I102|ATPB_ACIBC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226739966|sp|B0VNK4|ATPB_ACIBS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226739967|sp|B0VBP3|ATPB_ACIBY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|169150571|emb|CAM88480.1| membrane-bound ATP synthase , F1 sector, beta-subunit [Acinetobacter baumannii AYE] gi|169150959|emb|CAO99574.1| membrane-bound ATP synthase , F1 sector, beta-subunit [Acinetobacter baumannii] gi|183208092|gb|ACC55490.1| F0F1-type ATP synthase, beta subunit [Acinetobacter baumannii ACICU] gi|193076046|gb|ABO10638.2| membrane-bound ATP synthase F1 sector, beta-subunit [Acinetobacter baumannii ATCC 17978] gi|213054722|gb|ACJ39624.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB0057] gi|213988424|gb|ACJ58723.1| ATP synthase F1, beta subunit [Acinetobacter baumannii AB307-0294] gi|260408760|gb|EEX02064.1| ATP synthase F1, beta subunit [Acinetobacter baumannii ATCC 19606] gi|322506367|gb|ADX01821.1| atpD [Acinetobacter baumannii 1656-2] gi|323516235|gb|ADX90616.1| F0F1 ATP synthase subunit beta [Acinetobacter baumannii TCDC-AB0715] gi|332729122|gb|EGJ60469.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013150] gi|332732788|gb|EGJ64004.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6013113] gi|332736205|gb|EGJ67220.1| ATP synthase F1, beta subunit [Acinetobacter baumannii 6014059] Length = 464 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 160/307 (52%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + + I + P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDEAGPVATEE-RLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLLFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD +VL+R +A G YP +DPL S SR D E ++ ++ +++ R++E + Sbjct: 317 FAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARAVQNVLQRYKELK 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|51599165|gb|AAU08241.1| ATP synthase beta subunit [Nonomuraea sp. ATCC 39727] Length = 482 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 103/303 (33%), Positives = 158/303 (52%), Gaps = 18/303 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG+ +D S K + I P + + TGI+VID+ TP G Sbjct: 103 GHVWNALGETLDVPTSSLKIEERWGIHRPSPAFDQLESRTELLVTGIKVIDLLTPYVQGG 162 Query: 163 RIGVFAGSGIGKSTLLSM--------FARSDCFDKVIISLVGERGREVRE-FIEDYLGDN 213 +IG+F G+G+GK+ L+ F + CF + VGER RE + ++E D Sbjct: 163 KIGLFGGAGVGKTVLIQEMIRRVARNFGGTSCF-----AGVGERTREGNDLWLEMEEADV 217 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272 LK + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 218 LKDTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTL 277 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + L Sbjct: 278 LGRMPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDITDPAPHNAFAHL 335 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEETRDIRL 391 D VL+R ++E+G YP VDPL S SR+ D +E V+ T ++ ++ E +DI Sbjct: 336 DAQTVLSRPISEKGIYPAVDPLDSSSRILDPQIVGEEHYRVAQETKRILQKYRELQDIIA 395 Query: 392 IGG 394 I G Sbjct: 396 ILG 398 >gi|254569858|ref|XP_002492039.1| Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase [Pichia pastoris GS115] gi|238031836|emb|CAY69759.1| Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase [Pichia pastoris GS115] gi|328351470|emb|CCA37869.1| F-type H+-transporting ATPase subunit beta [Pichia pastoris CBS 7435] Length = 503 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 165/311 (53%), Gaps = 28/311 (9%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+IN +G+PID +G + + I + P +N+ + +TGI+V+D+ P Sbjct: 117 LGRIINVIGEPIDE-----RGPIECKQRNPIHADPPSFVNQSTAAEVLETGIKVVDLLAP 171 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE-- 207 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E Sbjct: 172 YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETG 230 Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 + GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF Sbjct: 231 VINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQ 288 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP Sbjct: 289 AGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTQKGSVTSVQAVYVPADDLTDPA 346 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R ++E G YP VDPL S SRL D A E ++ + + + + Sbjct: 347 PATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVAVVGQEHYEVATQVQQTLQAY 406 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 407 KSLQDIIAILG 417 >gi|225175830|ref|ZP_03729823.1| H+transporting two-sector ATPase alpha/beta subunit central region [Dethiobacter alkaliphilus AHT 1] gi|225168754|gb|EEG77555.1| H+transporting two-sector ATPase alpha/beta subunit central region [Dethiobacter alkaliphilus AHT 1] Length = 459 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 102/316 (32%), Positives = 162/316 (51%), Gaps = 13/316 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116 G+V+ +N D +V I G ++ + F + S GRV + LG+P D G Sbjct: 42 GRVLEVNRDKALVQIFEGSSGMNVNQSKVRFLGKGIELPVSMDMLGRVFDGLGRPRDNGP 101 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + L + + P A N + +TG+ ID L GQ++ +F+GSG+ + Sbjct: 102 KIIPEDRLDINGLPLNPYARNYP--SEFIQTGVSTIDGLNTLVRGQKLPIFSGSGLPHNR 159 Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 L + AR +D ++ + +G E FI D+ + +SV+ + +D+ I Sbjct: 160 LAAQIARQAKVLGTDAKFALVFAAMGITFEEADFFISDFRKTGAIDRSVLFINLADDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + KG +VL+I+ IT +A ++REI+ E+P RGYP +++ Sbjct: 220 ERIATPRMALTAAEYLAYEKGMHVLVIMTDITNYAEALREISAARKEVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L L ER G +G+IT + + + D+ PI D I +G I+LNRSL +G Y Sbjct: 280 DLATLYERAGRIRDREGSITQIPILTMPEDDKTHPIPDLTGYITEGQIMLNRSLNRKGIY 339 Query: 349 PPVDPLASVSRLADKA 364 PPVD L S+SRL DK Sbjct: 340 PPVDVLPSLSRLKDKG 355 >gi|306922408|ref|NP_001182454.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Equus caballus] Length = 528 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E ++ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYEVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|259147584|emb|CAY80835.1| Atp2p [Saccharomyces cerevisiae EC1118] Length = 511 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419 Query: 389 IRLIGG 394 I I G Sbjct: 420 IIAILG 425 >gi|83313238|ref|YP_423502.1| F0F1 ATP synthase subunit beta [Magnetospirillum magneticum AMB-1] gi|118573694|sp|Q2VZN2|ATPB_MAGSA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|82948079|dbj|BAE52943.1| F0F1-type ATP synthase, beta subunit [Magnetospirillum magneticum AMB-1] Length = 474 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID +G ++ I + P +++ + TGI+VID+ P C G Sbjct: 88 GRIINVIGEPIDERGPIGN-KTTLPIHADAPEFVDQSTETEILVTGIKVIDLLAPYCKGG 146 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+ G+G+GK+ L+ + A++ V VGER RE + + + + Sbjct: 147 KIGLCGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIKLD 205 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 K +V +E P R L+ +T+AEYF +G +VL +D+I RF + E++ Sbjct: 206 GPGSKVALVYGQMNEPPGARARVALSGLTVAEYFRDVEGQDVLFFVDNIFRFTQAGSEVS 265 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 266 ALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATSFA 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VLNR +AE G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 324 HLDATTVLNRQIAELGIYPAVDPLDSTSRVLDPRVVGNDHYQTARDVQRILQTYKSLQDI 383 Query: 390 RLIGG 394 I G Sbjct: 384 IAILG 388 >gi|237756387|ref|ZP_04584932.1| ATP synthase F1, beta subunit [Sulfurihydrogenibium yellowstonense SS-5] gi|237691452|gb|EEP60515.1| ATP synthase F1, beta subunit [Sulfurihydrogenibium yellowstonense SS-5] Length = 474 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+PID + + I + P + + F+TGI+VID+ PL G Sbjct: 94 LGRIFNVVGQPIDEAGPV-NAEEYWPIFREAPSFEEQSTKVEQFETGIKVIDLLVPLIKG 152 Query: 162 QRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 ++G+F G+G+GK+ L+ A+ V++ VGER RE + ++E L Sbjct: 153 GKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLWMEMKESGVLPY 211 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P +R T +T+AEYF + +VL+ +D+I RF + E++T G Sbjct: 212 TAMVYGQMNEPPGVRFRVAQTGLTMAEYFRDVEKQDVLIFIDNIFRFVQAGAEVSTLLGR 271 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 LP A GY ++ +++ + ERI ++ G+IT++ +V V D+ DP S+ + LD Sbjct: 272 LPSAVGYQPTLGTDVGEVQERIASTKN--GSITSIQAVYVPADDITDPAPASIFAHLDAT 329 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394 IVL R L E G YP +DPL S SR + +E V+ T ++ R++E ++I I G Sbjct: 330 IVLQRRLTELGIYPAIDPLESTSRALAPEYIGEEHYYVARETQRILQRYKELQEIIAILG 389 >gi|188997519|ref|YP_001931770.1| ATP synthase F1, beta subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|188932586|gb|ACD67216.1| ATP synthase F1, beta subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 474 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+PID + + I + P + + F+TGI+VID+ PL G Sbjct: 94 LGRIFNVVGQPIDEAGPV-NAEEYWPIFREAPSFEEQSTKVEQFETGIKVIDLLVPLIKG 152 Query: 162 QRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 ++G+F G+G+GK+ L+ A+ V++ VGER RE + ++E L Sbjct: 153 GKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLWMEMKESGVLPY 211 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P +R T +T+AEYF + +VL+ +D+I RF + E++T G Sbjct: 212 TAMVYGQMNEPPGVRFRVAQTGLTMAEYFRDVEKQDVLIFIDNIFRFVQAGAEVSTLLGR 271 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 LP A GY ++ +++ + ERI ++ G+IT++ +V V D+ DP S+ + LD Sbjct: 272 LPSAVGYQPTLGTDVGEVQERIASTKN--GSITSIQAVYVPADDITDPAPASIFAHLDAT 329 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394 IVL R L E G YP +DPL S SR + +E V+ T ++ R++E ++I I G Sbjct: 330 IVLQRRLTELGIYPAIDPLESTSRALAPEYIGEEHYYVARETQRILQRYKELQEIIAILG 389 >gi|46909267|gb|AAT06151.1| ATP synthase beta subunit [Ptychodera flava] Length = 427 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 103/316 (32%), Positives = 161/316 (50%), Gaps = 19/316 (6%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 R I P GR++N +G+PID + I + P + ++ TGI+V Sbjct: 56 RIPIGPETL--GRIMNVIGEPIDERGPIVTAS-KAGIHQEAPEFVEMNLTQEILVTGIKV 112 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203 +D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 113 VDLLAPYAKGGKIGLFGGAGVGKTVLIIELINNVAKAHGGYSVFAG-VGERTREGNDLYH 171 Query: 204 EFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 E IE L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 172 EMIEGGIISLTDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 231 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 232 FRFTQAGSEVSVLLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 289 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DP + + LD VL+R +AE G YP VDPL S SR+ D DE V+ + Sbjct: 290 LTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSASRIVDPNVVGDEHYSVARGVQK 349 Query: 379 LIHRFEETRDIRLIGG 394 ++ + +DI I G Sbjct: 350 ILQDYRSLQDIIAILG 365 >gi|6322581|ref|NP_012655.1| Atp2p [Saccharomyces cerevisiae S288c] gi|84028178|sp|P00830|ATPB_YEAST RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|307568101|pdb|2XOK|D Chain D, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A Resolution gi|307568102|pdb|2XOK|E Chain E, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A Resolution gi|307568103|pdb|2XOK|F Chain F, Refined Structure Of Yeast F1c10 Atpase Complex To 3 A Resolution gi|1015845|emb|CAA89652.1| ATP2 [Saccharomyces cerevisiae] gi|1483632|gb|AAC49475.1| F1-ATPase beta-subunit [Saccharomyces cerevisiae] gi|256273131|gb|EEU08086.1| Atp2p [Saccharomyces cerevisiae JAY291] gi|285813008|tpg|DAA08906.1| TPA: Atp2p [Saccharomyces cerevisiae S288c] Length = 511 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419 Query: 389 IRLIGG 394 I I G Sbjct: 420 IIAILG 425 >gi|294631413|ref|ZP_06709973.1| ATP synthase F1, beta subunit [Streptomyces sp. e14] gi|292834746|gb|EFF93095.1| ATP synthase F1, beta subunit [Streptomyces sp. e14] Length = 482 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 177/328 (53%), Gaps = 19/328 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ D+ S I K P + + F+TG++VID+ TP G Sbjct: 105 GKVFNTLGEVLNVDEQYTGERWS--IHRKAPNFDELESKTEMFETGVKVIDLLTPYVKGG 162 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + IE+ + D+ + K+ Sbjct: 163 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEE-MSDSGVIDKT 221 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G + Sbjct: 222 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 281 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD Sbjct: 282 PSAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATT 339 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R ++E+G YP VDPL S SR+ D + A D + +++ ++++ +DI I Sbjct: 340 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYNAAMRVKNILQKYKDLQDIIAI--- 396 Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 397 -LGIDELGEEDKLVVHRARRVERFLSQN 423 >gi|227874659|ref|ZP_03992822.1| F0F1 ATP synthase subunit beta [Mobiluncus mulieris ATCC 35243] gi|269977540|ref|ZP_06184507.1| ATP synthase F1, beta subunit [Mobiluncus mulieris 28-1] gi|306817951|ref|ZP_07451689.1| ATP synthase F1 sector beta subunit [Mobiluncus mulieris ATCC 35239] gi|307701363|ref|ZP_07638384.1| ATP synthase F1, beta subunit [Mobiluncus mulieris FB024-16] gi|227844868|gb|EEJ55014.1| F0F1 ATP synthase subunit beta [Mobiluncus mulieris ATCC 35243] gi|269934143|gb|EEZ90710.1| ATP synthase F1, beta subunit [Mobiluncus mulieris 28-1] gi|304649294|gb|EFM46581.1| ATP synthase F1 sector beta subunit [Mobiluncus mulieris ATCC 35239] gi|307613524|gb|EFN92772.1| ATP synthase F1, beta subunit [Mobiluncus mulieris FB024-16] Length = 478 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 90/269 (33%), Positives = 148/269 (55%), Gaps = 9/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PP ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + D Sbjct: 127 PPTFDKLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGG 186 Query: 192 ISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I + L K+ +V DE P R L+ +T+AEYF Sbjct: 187 VSVFAGVGERTREGNDLIHEMADAGVLDKTAMVFGQMDEPPGTRLRVALSGLTMAEYFRD 246 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ +L ERI + + Sbjct: 247 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHS 304 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A G YP VDPLAS SR+ D + Sbjct: 305 ITSLQAIYVPADDYTDPAPATTFAHLDATTNLSRDIASRGLYPAVDPLASTSRILDPRYV 364 Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E ++ + + ++ + +E +DI I G Sbjct: 365 GKEHYEVATQVKQILQKNKELQDIIAILG 393 >gi|320407253|gb|ADW27402.1| ATP synthase beta subunit [Scoloplos armiger] Length = 360 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 161/305 (52%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID + + I ++ P ++ +TGI+V+D+ P G Sbjct: 33 GRIINVIGEPIDERGPVNAKHFAA-IHAEAPEFTEMSVEQEILETGIKVVDMLAPYAKGG 91 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 92 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVICLT 150 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 151 DDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 210 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 211 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 268 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VL+R +AE G YP VDPL S SR D +E V+ S+ ++ ++ +DI Sbjct: 269 HLDATTVLSRGIAELGIYPAVDPLDSSSRXLDXNIVGEEHYTVARSVQKVLQDYKSLQDI 328 Query: 390 RLIGG 394 I G Sbjct: 329 IAILG 333 >gi|255733362|gb|ACU31113.1| ATP synthase beta subunit [Brachionus plicatilis] Length = 426 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 162/318 (50%), Gaps = 24/318 (7%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTG 148 RI GR++N +G+PID +G ++ E + + P VE+ +TG Sbjct: 55 IRIPVGPATLGRIMNVIGEPIDE-----RGPITTESFAPIHAEAPEFTEMSVEQEILETG 109 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE 204 I+V+D+ P G +IG+F G+G+GK+ L+ A+S V VGER RE + Sbjct: 110 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLVMELIYNVAKSHGGYSVFAG-VGERTREGND 168 Query: 205 FIEDYLGDNL------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILD 257 + + + K +V +E P R LT +T+AEYF +G +VLL +D Sbjct: 169 LYHEMITTKVIDLQEHSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFID 228 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V Sbjct: 229 NIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPA 286 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SL 376 D+ DP + + LD VL+R +AE G YP VDPL S SR+ D +E V+ + Sbjct: 287 DDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRMMDPNVVGEEHYNVARGV 346 Query: 377 THLIHRFEETRDIRLIGG 394 ++ F+ +DI I G Sbjct: 347 QKILQDFKSLQDIIAILG 364 >gi|13357686|ref|NP_077960.1| F0F1 ATP synthase subunit beta [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762163|ref|YP_001752212.1| F0F1 ATP synthase subunit beta [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171920510|ref|ZP_02931798.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|183508849|ref|ZP_02958297.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186701941|ref|ZP_02971583.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|81858619|sp|Q9PR15|ATPB_UREPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081353|sp|B1AIB8|ATPB_UREP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|11266603|pir||H82928 ATP synthase beta chain UU129 [imported] - Ureaplasma urealyticum gi|6899088|gb|AAF30535.1|AE002114_2 ATP synthase beta chain [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827740|gb|ACA33002.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902985|gb|EDT49274.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675823|gb|EDT87728.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700692|gb|EDU18974.1| ATP synthase F1, beta subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 464 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 154/300 (51%), Gaps = 12/300 (4%) Query: 102 CGRVINALGKPIDGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N G PID + GK M I P + + +TGI+V+D+ P Sbjct: 88 LGRMFNVTGDPIDEQPAPTGK---RMPIHRPAPSFAEQAESIEILETGIKVVDLLVPFAK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + + +S+ VGER RE + + E D L K Sbjct: 145 GGKIGLFGGAGVGKTVLMQELIHNIAKNHGGLSVFAGVGERTREGNDLYYEMAESDVLDK 204 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R L+ +T+AE F G +VLL +D+I RF + E++ G Sbjct: 205 TALVFGQMNEPPGARMRVALSGLTMAEEFRDAFGQDVLLFIDNIFRFTQAGSEVSALLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + S LD Sbjct: 265 MPSAVGYQPTLAFEMGQLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAK 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R++A G YP + PL S SRL D + + ++ RF E +DI I G Sbjct: 323 VVLDRAIASLGLYPAISPLQSTSRLLDPLVVGVKHYSVARRVIEILQRFMELQDIIAILG 382 >gi|151945186|gb|EDN63437.1| F1F0 ATP synthase beta subunit [Saccharomyces cerevisiae YJM789] gi|190409593|gb|EDV12858.1| F(1)F(0)-ATPase complex beta subunit [Saccharomyces cerevisiae RM11-1a] gi|207343779|gb|EDZ71135.1| YJR121Wp-like protein [Saccharomyces cerevisiae AWRI1631] gi|323332907|gb|EGA74310.1| Atp2p [Saccharomyces cerevisiae AWRI796] gi|323354292|gb|EGA86135.1| Atp2p [Saccharomyces cerevisiae VL3] Length = 511 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419 Query: 389 IRLIGG 394 I I G Sbjct: 420 IIAILG 425 >gi|332143472|ref|YP_004429210.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] gi|226739971|sp|B4RS81|ATPB_ALTMD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|327553494|gb|AEB00213.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] Length = 461 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + M I + P ++ + +TGI+VID+ P G Sbjct: 86 LGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N L K Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNDSNVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 205 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 323 LSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKDIIAILG 380 >gi|71370834|gb|AAZ30646.1| ATP synthase beta subunit [Cerebratulus lacteus] Length = 427 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 103/319 (32%), Positives = 163/319 (51%), Gaps = 19/319 (5%) Query: 89 HWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148 H R + P GR+IN +G+PID + D I ++ P + ++ TG Sbjct: 53 HPIRIPVGPETL--GRIINVIGEPIDERGPV-PTDKRASIHAEAPEFVEMSVQQEILATG 109 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 110 IKVVDMLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGND 168 Query: 202 -VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 E IE L D+ K +V +E P R LT +T+AEYF +G +VLL + Sbjct: 169 LYHEMIEGGVINLKDDSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFI 228 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V Sbjct: 229 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVP 286 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S SR+ D +E ++ Sbjct: 287 ADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGEEHYTIARG 346 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ + +DI I G Sbjct: 347 VQKILQNYRSLQDIIAILG 365 >gi|89574051|gb|ABD77251.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Sus scrofa] Length = 437 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 77 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 135 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 136 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 194 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 195 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 254 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 255 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 312 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 313 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 372 Query: 389 IRLIGG 394 I I G Sbjct: 373 IIAILG 378 >gi|220913083|ref|YP_002488392.1| F0F1 ATP synthase subunit beta [Arthrobacter chlorophenolicus A6] gi|254808127|sp|B8HAY9|ATPB_ARTCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|219859961|gb|ACL40303.1| ATP synthase F1, beta subunit [Arthrobacter chlorophenolicus A6] Length = 484 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG+P+D +S I K P + + + +TGI+VID+ TP G Sbjct: 103 GHIFNVLGQPLDVTESELDISERWPIHRKAPAFASLEGSTEMLETGIKVIDLLTPYIKGG 162 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVLKDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ ++ V D++ DP + + LD Sbjct: 283 SAVGYQPNLADEMGLLQERITSTKGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR+ D + D + ++ + +E +DI I G Sbjct: 341 LSREIASRGLYPAVDPLTSTSRILDPQYIGKDHYNTAVRVKQILQKNKELQDIIAILG 398 >gi|226947193|ref|YP_002802266.1| F0F1 ATP synthase subunit beta [Azotobacter vinelandii DJ] gi|226722120|gb|ACO81291.1| ATP synthase F1, beta subunit [Azotobacter vinelandii DJ] Length = 458 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ + I P + + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPIDEAGPIGE-EERWTIHRAAPTYAEQAGGNELLETGIKVIDLVCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELIRNIVMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 200 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 260 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + +++ R++E +DI I G Sbjct: 318 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTARGVQYVLQRYKELKDIIAILG 377 >gi|254464046|ref|ZP_05077457.1| ATP synthase F1, beta subunit [Rhodobacterales bacterium Y4I] gi|206684954|gb|EDZ45436.1| ATP synthase F1, beta subunit [Rhodobacterales bacterium Y4I] Length = 474 Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR++N +G+P+D + + + + P + Q E TGI+VID+ P Sbjct: 84 ATLGRILNVVGEPVDEKGPVNATE--TRAIHQPAPEFSEQSTESEILVTGIKVIDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVR----EFIEDY 209 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 142 SKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYWEMIESN 199 Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264 + DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF Sbjct: 200 VIKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQ 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V D+ DP Sbjct: 260 AGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPA 317 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VLNR+++E G YP VDPL S SRL D +E K+ S + ++ R+ Sbjct: 318 PATTFAHLDATTVLNRAISELGIYPAVDPLDSSSRLMDPQIVGEEHYKVASDVQQILQRY 377 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 378 KSLQDIIAILG 388 >gi|296331318|ref|ZP_06873790.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676304|ref|YP_003867976.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] gi|296151433|gb|EFG92310.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414548|gb|ADM39667.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] Length = 473 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+ ID ++ + D + + + P+ ++ E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGENIDLNEPV-PADAKKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + F E + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ Sbjct: 209 NKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDEQGQDVLFFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR LA + + + + + R++E +DI I Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|78049323|ref|YP_365498.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|118573779|sp|Q3BP15|ATPB_XANC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|78037753|emb|CAJ25498.1| ATP synthase beta chain [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 468 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRSAPSYEDQASTTELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF S KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|323336891|gb|EGA78149.1| Atp2p [Saccharomyces cerevisiae Vin13] Length = 511 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419 Query: 389 IRLIGG 394 I I G Sbjct: 420 IIAILG 425 >gi|261253521|ref|ZP_05946094.1| ATP synthase beta chain [Vibrio orientalis CIP 102891] gi|260936912|gb|EEX92901.1| ATP synthase beta chain [Vibrio orientalis CIP 102891] Length = 461 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 157/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G+ ++ I P + + +TG++VID+ P G Sbjct: 87 GRIMNVLGEPIDECGPIGE-KMNYGIHRSAPSYEEQSNSSELLETGVKVIDLVCPFAKGG 145 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E V+ + + R++E +DI I G Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPMIVGQEHYDVAQNVQMTLQRYKELKDIIAILG 380 >gi|164657588|ref|XP_001729920.1| hypothetical protein MGL_2906 [Malassezia globosa CBS 7966] gi|159103814|gb|EDP42706.1| hypothetical protein MGL_2906 [Malassezia globosa CBS 7966] Length = 439 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 20/306 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N +G+PID + K D S + + PPA Q + +TGI+V+D+ P G Sbjct: 54 GRILNVIGEPIDERGPV-KTD-SYRPIHRDPPAFVEQSTDAEILETGIKVVDLIAPYARG 111 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L+ + + + VGER RE E IE + Sbjct: 112 GKIGLFGGAGVGKTVLIQELINNIAKAHGGFSVFTGVGERTREGNDLYHEMIETGVINLE 171 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 172 GDS--KVSLVFGQMNEPPGARARVALTGLTVAEYFRDEQGQDVLLFIDNIFRFTQAGSET 229 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V +V V D+ DP + Sbjct: 230 SALLGRIPSAVGYQPTLSTDMGSMQERI--TTTRKGSITSVQAVYVPADDVTDPAPATTF 287 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE G YP VDPL S SR+ D E + S + L+ ++ +D Sbjct: 288 AHLDATTVLDRSIAELGIYPAVDPLNSQSRMLDPDVVGQEHYDVASGVQKLLQDYKSLQD 347 Query: 389 IRLIGG 394 I I G Sbjct: 348 IIAILG 353 >gi|38569390|gb|AAR24353.1| F1F0-ATPase beta subunit [Bifidobacterium adolescentis ATCC 15703] Length = 373 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326 >gi|256575366|gb|ACU87651.1| AtpD [Gallibacterium anatis] Length = 452 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G+ I P + + +TGI+VID+ P G Sbjct: 83 GRIMNVLGEPIDERGPIGE-KARWSIHRAAPSYEEQANSTELLETGIKVIDLVCPFAKGG 141 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 142 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKVS 201 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 261 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 262 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 319 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 SRQIASLGIYPAVDPLDSTSRQLDPQVVRQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|226493589|ref|NP_001151807.1| ATP synthase beta chain [Zea mays] gi|195614324|gb|ACG28992.1| ATP synthase beta chain [Zea mays] gi|195649793|gb|ACG44364.1| ATP synthase beta chain [Zea mays] Length = 553 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 165/314 (52%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+PID KGD++ + I + P + + ++ TGI+V+D+ Sbjct: 161 ATLGRIINVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 215 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 216 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 274 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 275 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 334 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 335 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 392 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 393 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 452 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 453 QNYKNLQDIIAILG 466 >gi|90578412|ref|ZP_01234223.1| ATP synthase subunit B [Vibrio angustum S14] gi|90441498|gb|EAS66678.1| ATP synthase subunit B [Vibrio angustum S14] Length = 461 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 155/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG PID +G+ I + P + + +TG++VID+ P G Sbjct: 87 GRIMNVLGTPIDECGEIGE-KTKYAIHREAPSYEEQSNSSELLETGVKVIDLICPFAKGG 145 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 AMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D D + + ++ R++E +DI I G Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGQDHYDVARGVQTVLQRYKELKDIIAILG 380 >gi|86156234|gb|ABC86835.1| ATP synthase beta subunit [Pinctada fucata] Length = 523 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 162/314 (51%), Gaps = 17/314 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 RI GR+IN +G+PID + + D + I ++ P + ++ +TGI+V+D Sbjct: 128 RIPVGPATLGRIINVIGEPIDERGPV-QTDKLLPIHAEAPEFVEMSVEQEILETGIKVVD 186 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY 209 + P G +IG+F G+G+GK+ L+ + A++ V VGER RE + + Sbjct: 187 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEM 245 Query: 210 -------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I R Sbjct: 246 ITSKVISLTDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 305 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 306 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLT 363 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R ++E G YP V PL S SR+ D E ++ + ++ Sbjct: 364 DPAPATTFAHLDATTVLSRGISELGIYPAVGPLDSTSRILDPNVVGQEHYRVARGVQKIL 423 Query: 381 HRFEETRDIRLIGG 394 F +DI I G Sbjct: 424 QDFRSLQDIIAILG 437 >gi|194332903|ref|YP_002014763.1| F0F1 ATP synthase subunit beta [Prosthecochloris aestuarii DSM 271] gi|194310721|gb|ACF45116.1| ATP synthase F1, beta subunit [Prosthecochloris aestuarii DSM 271] Length = 462 Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PIDG + D + I P + F+TGI+VID+ P G Sbjct: 86 LGRMLNVVGEPIDGMGDI-DSDTTRSIHRSAPKFDELSTKSEMFETGIKVIDLLEPYSRG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ + + + + VGER RE + E+ + K+ Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWEEMKESGVIDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT ++IAEYF + +VLL +D+I RF + E++ G + Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFRDVEHRDVLLFVDNIFRFTQAGSEVSALLGRM 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L +RI + G++T+V ++ V D+ DP + + LD Sbjct: 265 PSAVGYQPTLGTEMGELQDRI--VSTKDGSVTSVQAIYVPADDLTDPAPATTFTHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D D+ ++ ++ R+++ +DI I G Sbjct: 323 VLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKEILQRYKDLQDIIAILG 381 >gi|323347832|gb|EGA82094.1| Atp2p [Saccharomyces cerevisiae Lalvin QA23] Length = 511 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419 Query: 389 IRLIGG 394 I I G Sbjct: 420 IIAILG 425 >gi|323308508|gb|EGA61753.1| Atp2p [Saccharomyces cerevisiae FostersO] Length = 511 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 241 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 359 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 360 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419 Query: 389 IRLIGG 394 I I G Sbjct: 420 IIAILG 425 >gi|56784991|dbj|BAD82521.1| putative ATP synthase beta subunit [Oryza sativa Japonica Group] Length = 425 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+PID KGD++ + I + P + + ++ TGI+V+D+ Sbjct: 33 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 87 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 88 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 146 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 147 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 206 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 207 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 264 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 265 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 324 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 325 QNYKNLQDIIAILG 338 >gi|321260596|ref|XP_003195018.1| ATP synthase beta chain, mitochondrial precursor [Cryptococcus gattii WM276] gi|317461490|gb|ADV23231.1| ATP synthase beta chain, mitochondrial precursor, putative [Cryptococcus gattii WM276] Length = 547 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 20/316 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 +I GR++N +G+PID + KG I + P +++ + +TGI+V+ Sbjct: 151 IKIPVGPATLGRIMNVIGQPIDQRGPI-KGVKEAPIHADAPEFVDQSTQAEILETGIKVV 209 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK+ L+ A++ V VGER RE + + Sbjct: 210 DLLAPYARGGKIGLFGGAGVGKTVLIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHE 268 Query: 209 YL--------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I Sbjct: 269 MRETGVINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNI 326 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ Sbjct: 327 FRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGGMQERI--TTTKKGSITSVQAVYVPADD 384 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTH 378 DP + + LD VL+RS+AE G YP VDPL S SR+ D + ++ + Sbjct: 385 LTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSKSRMLDPRVVGQRHYEIATKTQQ 444 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 445 ILQSYKSLQDIIAILG 460 >gi|253579147|ref|ZP_04856417.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39B_FAA] gi|251849245|gb|EES77205.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39BFAA] Length = 464 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 158/305 (51%), Gaps = 10/305 (3%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GRV N LG P+D + + I + P + + +TGI+V+D+ Sbjct: 82 PVGEECLGRVFNLLGDPVD-NLPAPEAKERWSIHRQAPSYEEQMPATEILETGIKVVDLI 140 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 141 CPYAKGGKIGLFGGAGVGKTVLIMELIHNVATAHGGLSVFTGVGERTREGNDLYNEMKES 200 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 + K+ +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ Sbjct: 201 GVIDKTALVYGQMNEPPGARMRVGLSGLTMAEYFRDEKNQDVLLFIDNIFRFTQAGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + S Sbjct: 261 ALLGRMPSAVGYQPTLATEMGNLQERI--TSTRKGSITSVQAVYVPADDLTDPAPATTFS 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++ +G YP VDPL S SR L+ + + ++ S+ ++ R++E +DI Sbjct: 319 HLDATTVLSREISSQGIYPAVDPLDSTSRILSPEIVGTEHYEIARSVQRVLQRYKELQDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAIMG 383 >gi|112791392|gb|ABI21966.1| ATP synthase beta subunit [Pantoea stewartii] Length = 350 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 21/300 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---------PPAMNRQRVEKGFKTGIR 150 GR++N LG+PID KGDL E S V P + ++ +TGI+ Sbjct: 58 ATLGRIMNVLGEPIDM-----KGDLKEEDGSAVEVSSIHRPAPSYEEQSNSQELLETGIK 112 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIE 207 VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE +F Sbjct: 113 VIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAAEHSGYSVFAGVGERTREGNDFYH 172 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + N + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + Sbjct: 173 EMTDSNVIDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAG 232 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP Sbjct: 233 TEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPA 290 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + + LD + L+R +A G YP VDPL S SR D E V+ + L+ R++E Sbjct: 291 TTFAHLDSTVTLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSLLQRYQE 350 >gi|78185913|ref|YP_373956.1| F0F1 ATP synthase subunit beta [Chlorobium luteolum DSM 273] gi|78165815|gb|ABB22913.1| ATP synthase F1 subcomplex beta subunit [Chlorobium luteolum DSM 273] Length = 482 Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 156/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G PIDG + + I P + + F+TGI+VID+ P G Sbjct: 106 LGRMLNVVGDPIDGRGPV-NATKTYSIHRSAPKFEDLSTKAEMFETGIKVIDLLEPYSRG 164 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ + + + + VGER RE + + + + K+ Sbjct: 165 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKT 224 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT ++IAEYF + +VLL +D+I RF + E++ G + Sbjct: 225 ALVFGQMNEPPGARARVALTGLSIAEYFRDEEHRDVLLFIDNIFRFTQAGSEVSALLGRM 284 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L +RI + + G++T+V ++ V D+ DP + + LD Sbjct: 285 PSAVGYQPTLATEMGELQDRI--TSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDATT 342 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D D+ S+ ++ R+++ +DI I G Sbjct: 343 VLSRQIAELGIYPAVDPLDSTSRILDPNVIGDDHYDTAQSVKQILQRYKDLQDIIAILG 401 >gi|330447292|ref|ZP_08310942.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491483|dbj|GAA05439.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 468 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 15/307 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + I P + V + +TG++VID+ P Sbjct: 84 ATLGRIMNVLGQPIDECGEIGEQE-RYAIHRAAPSYEEQSNVTELLETGVKVIDLICPFA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 143 KGGKIGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYYEMQEAGVVN 202 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E Sbjct: 203 IENPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTE 262 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + Sbjct: 263 VSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATT 320 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD +VL+R +A G YP +DPL S SR+ D E + + L+ R++E + Sbjct: 321 FAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSLLQRYKELK 380 Query: 388 DIRLIGG 394 DI I G Sbjct: 381 DIIAILG 387 >gi|297243083|ref|ZP_06927021.1| F0F1-type ATP synthase, beta subunit [Gardnerella vaginalis AMD] gi|296889294|gb|EFH28028.1| F0F1-type ATP synthase, beta subunit [Gardnerella vaginalis AMD] Length = 495 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 10/273 (3%) Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 138 IHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 197 Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + +S+ VGER RE + I + L+K+ +V DE P R PLTA+T+AE Sbjct: 198 NHGGVSVFAGVGERTREGNDLIGEMADAGVLEKTALVFGQMDEPPGTRLRVPLTALTMAE 257 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 258 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TST 315 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL S SR+ D Sbjct: 316 RGHSITSLQAIYVPADDYTDPAPATTFTHLDATTELSRDIAAKGIYPAVDPLTSTSRILD 375 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 376 PRYVGQAHYDCANRVKAILQRNKELQDIIALIG 408 >gi|283782658|ref|YP_003373412.1| ATP synthase F1, beta subunit [Gardnerella vaginalis 409-05] gi|283440979|gb|ADB13445.1| ATP synthase F1, beta subunit [Gardnerella vaginalis 409-05] Length = 495 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 10/273 (3%) Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 138 IHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 197 Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + +S+ VGER RE + I + L+K+ +V DE P R PLTA+T+AE Sbjct: 198 NHGGVSVFAGVGERTREGNDLIGEMADAGVLEKTALVFGQMDEPPGTRLRVPLTALTMAE 257 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 258 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TST 315 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL S SR+ D Sbjct: 316 RGHSITSLQAIYVPADDYTDPAPATTFTHLDATTELSRDIAAKGIYPAVDPLTSTSRILD 375 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 376 PRYVGQAHYDCANRVKAILQRNKELQDIIALIG 408 >gi|56784992|dbj|BAD82522.1| putative ATP synthase beta subunit [Oryza sativa Japonica Group] Length = 419 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+PID KGD++ + I + P + + ++ TGI+V+D+ Sbjct: 27 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 81 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 82 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 140 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 141 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 200 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 201 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 258 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 259 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 318 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 319 QNYKNLQDIIAILG 332 >gi|320407245|gb|ADW27398.1| ATP synthase beta subunit [Erpobdella octoculata] Length = 369 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 161/306 (52%), Gaps = 19/306 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID + + EI + P + ++ +TGI+V+D+ P G Sbjct: 64 GRIINVIGEPIDERGPVNAKHFA-EIHADAPEFVEMSVEQEILETGIKVVDMLAPYAKGG 122 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------IEDYL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE + + D Sbjct: 123 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFXG-VGERTREGNDLYHEMIMSGVIDLK 181 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269 GD K S+V +E P R LT +T+AEYF K G +VLL +D+I RF + E+ Sbjct: 182 GDKSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSEV 240 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 241 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 298 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 299 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGQEHYSVARGVQKILQDYKSLQD 358 Query: 389 IRLIGG 394 I I G Sbjct: 359 IIAILG 364 >gi|229817113|ref|ZP_04447395.1| hypothetical protein BIFANG_02370 [Bifidobacterium angulatum DSM 20098] gi|229784902|gb|EEP21016.1| hypothetical protein BIFANG_02370 [Bifidobacterium angulatum DSM 20098] Length = 491 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/269 (34%), Positives = 151/269 (56%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TG++VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 138 PPAFDQLESKTQMFETGVKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 197 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 198 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 257 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 258 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 315 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 316 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASKGIYPAVDPLSSTSRILDPRYV 375 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 376 GQAHYECANRVKAILQRNKELQDIIALIG 404 >gi|332308599|ref|YP_004436450.1| ATP synthase F1, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175928|gb|AEE25182.1| ATP synthase F1, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 461 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 156/300 (52%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ + M I + P ++ + +TGI+VID+ P Sbjct: 84 ATLGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPTYEDQSSSVELLETGIKVIDLVCPFA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 143 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLD 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 203 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLAEEMGVLQERIAST--KTGSITSIQAVYVPADDLTDPSPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + + ++ R++E +DI I G Sbjct: 321 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYETARGVQSVLQRYKELKDIIAILG 380 >gi|255733192|gb|ACU31053.1| F1F0-ATP synthase beta subunit [Procambarus clarkii] Length = 525 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 23/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+IN +G+PID +G + E S + P ++ ++ TGI+V+D+ P Sbjct: 138 LGRIINVIGEPIDE-----RGPVPTEFYSTIHAEAPDFVDMSVEQEILVTGIKVVDLLAP 192 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMF---ARSDCFDKVIISLVGERGRE----VREFIED-- 208 G +IG+F G+G+GK+ L+ A + + VGER RE E IE Sbjct: 193 YSKGGKIGLFGGAGVGKTVLIMELINNAAKAHGGYSVFAGVGERTREGNDLYHEMIESGV 252 Query: 209 -YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 253 ISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAG 312 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP Sbjct: 313 SEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPA 370 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R +AE G YP VDPL S+SR+ D A+ + ++ ++ + Sbjct: 371 TTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMDPNIIGAEHYNVARAVQKILQDHKS 430 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 431 LQDIIAILG 439 >gi|226441959|gb|ACO57569.1| F1 ATP synthase beta subunit [Gillichthys mirabilis] Length = 505 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 109 IRIPVGPETLGRIMNVIGEPIDERGPISTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 167 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 168 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 226 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 227 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 286 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 287 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 344 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 345 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAEHYDVARGVQKI 404 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 405 LQDYKSLQDIIAILG 419 >gi|241765094|ref|ZP_04763085.1| ATP synthase F1, beta subunit [Acidovorax delafieldii 2AN] gi|241365286|gb|EER60114.1| ATP synthase F1, beta subunit [Acidovorax delafieldii 2AN] Length = 468 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 107/340 (31%), Positives = 169/340 (49%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G +V + G P GR+++ LG PID + + DL+ Sbjct: 51 VVRTIALGSSDGLRRGIMVTNTGSAITVPVGKATLGRIMDVLGAPIDERGPVSQ-DLTAS 109 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD---NLKK-----SVVVVATSDESPILRKMAP 235 + V VGER RE +F + NL+K +V +E P R Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLEKLEDSKVAMVYGQMNEPPGNRLRVA 228 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT +TIAE F +G +VL +D+I R+ + E++ G +P A GY ++ E+ RL E Sbjct: 229 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 288 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL Sbjct: 289 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 346 Query: 356 SVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 S SR D D ++ + R++E RDI I G Sbjct: 347 STSRQLDPNVVGEDHYATARAVQGTLQRYKELRDIIAILG 386 >gi|315121815|ref|YP_004062304.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495217|gb|ADR51816.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 480 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/347 (30%), Positives = 175/347 (50%), Gaps = 29/347 (8%) Query: 70 VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME- 127 V +G + +S GD + G+ P GR++N +G+P+D ++ L+ E Sbjct: 57 VRCIAMGKTDGLSRGDSIIDTGKQITVPVGEATLGRIMNVIGEPVDDHGAI----LTSER 112 Query: 128 -IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMF 181 + ++ P+ Q TGI+VID+ +P G +IG+F G+G+GK+ L+ + Sbjct: 113 RAIHQLAPSYTEQSTGSSILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTVLIMELINNV 172 Query: 182 ARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-------------KSVVVVATSDESP 228 A++ V VGER RE + + +G + K +V +ESP Sbjct: 173 AKAHGGYSVFAG-VGERTREGNDLYREMIGSKVNVDPSTNNGSAVGSKCSLVYGQMNESP 231 Query: 229 ILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R LT +T+AE+F +G +VL +D+I RF + EI+ G +P A GY +++ S Sbjct: 232 GARARVALTGLTVAEHFRDQGQDVLFFIDNIFRFTQANSEISALLGRIPSAVGYQSTLAS 291 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 E+ L ERI + KG+IT+V ++ V D+ DP + + LD VL+R ++E+G Y Sbjct: 292 EMGELQERI--TTTLKGSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRKISEKGIY 349 Query: 349 PPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 P VDPL S S + + E V+ + ++ R++ +DI I G Sbjct: 350 PAVDPLDSNSNILEVDTVGKEHYDVARRVQEILQRYKSLQDIIAILG 396 >gi|239993102|ref|ZP_04713626.1| F0F1 ATP synthase subunit beta [Alteromonas macleodii ATCC 27126] Length = 461 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 157/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + M I + P ++ + +TGI+VID+ P G Sbjct: 86 LGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPSYEDQSSSVELLETGIKVIDLVCPFAKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N L K Sbjct: 145 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFAGVGERTREGNDFYHEMNESNVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 205 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 323 LSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKDIIAILG 380 >gi|291295349|ref|YP_003506747.1| H(+)-transporting two-sector ATPase [Meiothermus ruber DSM 1279] gi|290470308|gb|ADD27727.1| H(+)-transporting two-sector ATPase [Meiothermus ruber DSM 1279] Length = 466 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/297 (31%), Positives = 157/297 (52%), Gaps = 16/297 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ S GR N +GKPIDG + D + I + R++ E+ +TGI ID Sbjct: 79 RLGVSKEMVGRAFNGIGKPIDGLPPV-VADKRLPINGAPINPVAREKPEEFIQTGISAID 137 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206 + L GQ++ +F+GSG+ + L + AR + F V+ + +G REV F+ Sbjct: 138 VNMTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLGEGEGF-AVVFAAMGITQREVSYFM 196 Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +++ L +SV+ + +D+ + R + P A+T AEY + + D +VL+IL +T + Sbjct: 197 QEFERTGALSRSVLFLNKADDPTVERLLTPRMALTAAEYLAFEHDYHVLVILTDMTNYCE 256 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI E+P RGYP ++++L L ER G +KG++T + + + GD+ PI Sbjct: 257 ALREIGGAREEIPGRRGYPGYMYTDLASLYERAGVVHGKKGSVTQIPILSMPGDDITHPI 316 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSL 376 D I +G I + R LA++G +PP++ S+SRL + AD K+L L Sbjct: 317 PDLTGYITEGQIFIARDLAQQGIFPPINVQPSLSRLMNNGIGKGKTRADHKELADQL 373 >gi|298490974|ref|YP_003721151.1| ATP synthase F1 subunit beta ['Nostoc azollae' 0708] gi|298232892|gb|ADI64028.1| ATP synthase F1, beta subunit ['Nostoc azollae' 0708] Length = 482 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 156/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG P+D + + + I P + F+TGI+V+D+ TP Sbjct: 95 ATLGRIFNVLGNPVDNQGPV-NAEARLPIHRDAPKFTELETKPSVFETGIKVVDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210 G +IG+F G+G+GK+ ++ + +S+ VGER RE E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DNL +S +V +E P R L+ +T+AEYF +VLL +D+I RF + Sbjct: 214 KDNLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + DE S+ + R++E Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARSVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|82889070|gb|ABB92857.1| ATP synthase F1 beta subunit [Wolbachia pipientis] Length = 310 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 153/288 (53%), Gaps = 20/288 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG ++E + + PP+ QR+ E+ TGI+V+D+ P G Sbjct: 18 GRIFNVVGELIDECGPL-KGKYNLEPIHRAPPSFTEQRIQEEVLVTGIKVMDLLAPYLKG 76 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 77 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 134 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 194 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 195 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 252 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 S LD VL+R +AE G YP VDPL S S+ +E V+S Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVAS 300 >gi|260770079|ref|ZP_05879012.1| ATP synthase beta chain [Vibrio furnissii CIP 102972] gi|260615417|gb|EEX40603.1| ATP synthase beta chain [Vibrio furnissii CIP 102972] gi|315182596|gb|ADT89509.1| F0F1 ATP synthase subunit beta [Vibrio furnissii NCTC 11218] Length = 460 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG PID +G+ + I P + +TGI+VID+ P G Sbjct: 86 GRIMNVLGDPIDECGPIGE-ETKYGIHRAAPSYEEQANSTALLETGIKVIDLICPFSKGG 144 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 203 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G +P Sbjct: 204 AMVYGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMP 263 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 264 SAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 321 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E V+ + + R++E +DI I G Sbjct: 322 LSRNIAALGLYPAIDPLDSTSRQLDPQIVGQEHYDVAQRVQMTLQRYKELKDIIAILG 379 >gi|158524734|gb|ABW71261.1| mitochondrial ATP synthase beta subunit [Phoronis muelleri] Length = 428 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/282 (33%), Positives = 151/282 (53%), Gaps = 16/282 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID + D I + P ++ ++ +TGI+V+ Sbjct: 55 IRIPVGPATLGRIINVIGEPIDERGPVNT-DKFASIHQEAPEFVDMSVEQEILETGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK T+L M ++ K + + VGER RE + + Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGK-TVLIMELINNVAKKHGGYSVFAGVGERTREGNDLYHE 172 Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 173 MIQTGVISLKDDTSKVSLVYGQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD + VL+R +AE G YP +DPL S SR+ D Sbjct: 291 TDPAPATTFAHLDANTVLSRGIAELGIYPAMDPLDSTSRILD 332 >gi|220905450|ref|YP_002480762.1| F0F1 ATP synthase subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|254808145|sp|B8J439|ATPB_DESDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|219869749|gb|ACL50084.1| ATP synthase F1, beta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 473 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 163/305 (53%), Gaps = 21/305 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR++N +G+P+D G ++ E + + PA Q + + +TGI+V+D+ P Sbjct: 91 VGRILNVIGRPVDE-----MGPINAEKYYPIHRPAPAFTDQNTKVELLETGIKVVDLLVP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G ++G+F G+G+GK+ +L + A+ V VGER RE + + L D Sbjct: 146 FPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGSSVFAG-VGERTREGNDLYHE-LKDA 203 Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 L+++ +V +E P R LTA+ AEYF + +VLL +D+I RF + E++ Sbjct: 204 GVLERATLVYGQMNEPPGARARVALTALACAEYFRDEEHQDVLLFIDNIFRFTQAGSEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++L L ERI + G+IT+V +V V D+ DP + S Sbjct: 264 ALLGRMPSAVGYQPTLGTDLGSLQERI--TSTNTGSITSVQAVYVPADDLTDPAPATTFS 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDI 389 LDG +VL+R +AE G YP VDPL S SR+ D +E V+ ++ +++E +DI Sbjct: 322 HLDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGEEHYAVARRVQMVLQKYKELQDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|34500028|gb|AAQ73596.1| ATP synthase beta subunit [Pasteurella caballi] Length = 445 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 155/301 (51%), Gaps = 16/301 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N LG+PID KGD+ E I P + + +TGI+VID+ P Sbjct: 84 GRIMNVLGEPIDQ-----KGDIGAEETWAIHRAAPSYEEQSNSTELLETGIKVIDLICPF 138 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS---LVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ + R+ + S VGER E +F + N L Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSDSLXVGERTPEGNDFYHEMTDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 199 DKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLG 258 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 259 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDS 316 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIG 393 +VL+R++A G YP VDPL S SR D E V+ + ++ R++E +DI I Sbjct: 317 TVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAIL 376 Query: 394 G 394 G Sbjct: 377 G 377 >gi|119026445|ref|YP_910290.1| F0F1 ATP synthase subunit beta [Bifidobacterium adolescentis ATCC 15703] gi|190358260|sp|A1A3C5|ATPB_BIFAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118766029|dbj|BAF40208.1| ATP synthase subunit beta [Bifidobacterium adolescentis ATCC 15703] Length = 494 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 141 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 200 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 201 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 260 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 261 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 318 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 319 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 378 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 379 GQAHYDCANRVKAILQRNKELQDIIALIG 407 >gi|297202403|ref|ZP_06919800.1| ATP synthase F1, beta subunit [Streptomyces sviceus ATCC 29083] gi|197710076|gb|EDY54110.1| ATP synthase F1, beta subunit [Streptomyces sviceus ATCC 29083] Length = 478 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 165/299 (55%), Gaps = 12/299 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ D++ S I K P + + F+TG++VID+ TP G Sbjct: 101 GKVFNTLGEVLNVDETYDGERWS--IHRKAPRFDELESKTEMFETGVKVIDLLTPYVKGG 158 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + IE+ + D+ + K+ Sbjct: 159 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEE-MSDSGVIDKT 217 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G + Sbjct: 218 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 277 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD Sbjct: 278 PSAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATT 335 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++E+G YP VDPL S SR+ D + A D + + ++ ++++ +DI I G Sbjct: 336 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYETAMRVKGILQKYKDLQDIIAILG 394 >gi|89574031|gb|ABD77241.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Aotus trivirgatus] Length = 433 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 77 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 135 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 136 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 194 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 195 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 254 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 255 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 312 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 313 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 372 Query: 389 IRLIGG 394 I I G Sbjct: 373 IIAILG 378 >gi|256077755|ref|XP_002575166.1| ATP synthase beta subunit [Schistosoma mansoni] gi|238660396|emb|CAZ31399.1| ATP synthase beta subunit, putative [Schistosoma mansoni] Length = 517 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 103/317 (32%), Positives = 165/317 (52%), Gaps = 28/317 (8%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFK 146 G RI GR++N +G+PID +G + ++MS + P + ++ + Sbjct: 119 GPIRIPVGPETLGRIMNVIGEPIDE-----RGPIKTKMMSGIHQDAPDFIEMSTEQEILE 173 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREV 202 TGI+V+D+ P G +IG+F G+G+GK+ L+ + AR+ V VGER RE Sbjct: 174 TGIKVVDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREG 232 Query: 203 REF--------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVL 253 + + D G+N K S+V +E P R LT +T+AEYF +G +VL Sbjct: 233 NDLYHEMITTGVIDLKGNNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVL 291 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 L +D+I RF + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ Sbjct: 292 LFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTRKGSITSVQAI 349 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV 373 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D +E V Sbjct: 350 YVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDPNIVGEEHYSV 409 Query: 374 SSLTHLIHRFEETRDIR 390 + I +E R ++ Sbjct: 410 ARGVQKI--LQENRSLQ 424 >gi|225352601|ref|ZP_03743624.1| hypothetical protein BIFPSEUDO_04226 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225156795|gb|EEG70189.1| hypothetical protein BIFPSEUDO_04226 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 493 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 140 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 199 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 200 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 259 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 260 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 317 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 318 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 377 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 378 GQAHYDCANRVKAILQRNKELQDIIALIG 406 >gi|16080734|ref|NP_391562.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|221311641|ref|ZP_03593488.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|221315969|ref|ZP_03597774.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320880|ref|ZP_03602174.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis str. JH642] gi|221325165|ref|ZP_03606459.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. subtilis str. SMY] gi|321313231|ref|YP_004205518.1| F0F1 ATP synthase subunit beta [Bacillus subtilis BSn5] gi|584808|sp|P37809|ATPB_BACSU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta; AltName: Full=Vegetative protein 31; Short=VEG31 gi|433991|emb|CAA82260.1| ATP synthase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|2636206|emb|CAB15698.1| ATP synthase (subunit beta, component F1) [Bacillus subtilis subsp. subtilis str. 168] gi|291486264|dbj|BAI87339.1| F0F1 ATP synthase subunit beta [Bacillus subtilis subsp. natto BEST195] gi|320019505|gb|ADV94491.1| F0F1 ATP synthase subunit beta [Bacillus subtilis BSn5] Length = 473 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 160/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+ ID ++ + D + + + P+ ++ E + +TGI+V+D+ P Sbjct: 90 VTLGRVFNVLGENIDLNEPV-PADAKKDPIHRQAPSFDQLSTEVEILETGIKVVDLLAPY 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + F E + Sbjct: 149 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLFYEMSDSGVI 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AE+F +G +VL +D+I RF + E++ Sbjct: 209 NKTAMVFGQMNEPPGARMRVALTGLTMAEHFRDVQGQDVLFFIDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + G++T++ ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L R L E G YP VDPLAS SR LA + + + + + R++E +DI I Sbjct: 327 ATTNLERKLTEMGIYPAVDPLASTSRALAPEIVGEEHYAVAREVQSTLQRYKELQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|261364179|ref|ZP_05977062.1| ATP synthase F1, beta subunit [Neisseria mucosa ATCC 25996] gi|288567786|gb|EFC89346.1| ATP synthase F1, beta subunit [Neisseria mucosa ATCC 25996] Length = 465 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D S+ D I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGSIDT-DKHRAIHQTAPKFDELSATTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF S KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|171742083|ref|ZP_02917890.1| hypothetical protein BIFDEN_01188 [Bifidobacterium dentium ATCC 27678] gi|283456791|ref|YP_003361355.1| ATP synthase subunit beta [Bifidobacterium dentium Bd1] gi|171277697|gb|EDT45358.1| hypothetical protein BIFDEN_01188 [Bifidobacterium dentium ATCC 27678] gi|283103425|gb|ADB10531.1| ATP synthase beta chain [Bifidobacterium dentium Bd1] Length = 494 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 141 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 200 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 201 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 260 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 261 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 318 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 319 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 378 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 379 GQAHYDCANRVKAILQRNKELQDIIALIG 407 >gi|59802447|ref|YP_209159.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA 1090] gi|194100111|ref|YP_002003251.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae NCCP11945] gi|239998099|ref|ZP_04718023.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02] gi|240013280|ref|ZP_04720193.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI18] gi|240015728|ref|ZP_04722268.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA6140] gi|240079862|ref|ZP_04724405.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19] gi|240114817|ref|ZP_04728879.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID18] gi|240120352|ref|ZP_04733314.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID24-1] gi|240122656|ref|ZP_04735612.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID332] gi|240124844|ref|ZP_04737730.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|260441369|ref|ZP_05795185.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2] gi|268593951|ref|ZP_06128118.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02] gi|268596007|ref|ZP_06130174.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19] gi|268600473|ref|ZP_06134640.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID18] gi|268681255|ref|ZP_06148117.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID332] gi|268683425|ref|ZP_06150287.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|291044726|ref|ZP_06570435.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2] gi|293397825|ref|ZP_06642031.1| ATP synthase F1, beta subunit [Neisseria gonorrhoeae F62] gi|75432313|sp|Q5F4Z0|ATPB_NEIG1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740654|sp|B4RJG0|ATPB_NEIG2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|59719342|gb|AAW90747.1| putative ATP synthase beta chain [Neisseria gonorrhoeae FA 1090] gi|193935401|gb|ACF31225.1| ATP synthase subunit B [Neisseria gonorrhoeae NCCP11945] gi|268547340|gb|EEZ42758.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae 35/02] gi|268549795|gb|EEZ44814.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae FA19] gi|268584604|gb|EEZ49280.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID18] gi|268621539|gb|EEZ53939.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID332] gi|268623709|gb|EEZ56109.1| ATP synthase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|291011620|gb|EFE03616.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae DGI2] gi|291611771|gb|EFF40840.1| ATP synthase F1, beta subunit [Neisseria gonorrhoeae F62] gi|317165543|gb|ADV09084.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae TCDC-NG08107] Length = 465 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 168/333 (50%), Gaps = 23/333 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ + S VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHS-GLSVFSGVGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I G+D + D+ AV + I FL Q Sbjct: 379 IAI----LGMDELSDEDKLAVMRARKIQRFLSQ 407 >gi|240112071|ref|ZP_04726561.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae MS11] gi|254492881|ref|ZP_05106052.1| ATP synthase subunit beta [Neisseria gonorrhoeae 1291] gi|268598130|ref|ZP_06132297.1| ATP synthase subunit beta [Neisseria gonorrhoeae MS11] gi|226511921|gb|EEH61266.1| ATP synthase subunit beta [Neisseria gonorrhoeae 1291] gi|268582261|gb|EEZ46937.1| ATP synthase subunit beta [Neisseria gonorrhoeae MS11] Length = 465 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 168/333 (50%), Gaps = 23/333 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ + S VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHS-GLSVFSGVGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I G+D + D+ AV + I FL Q Sbjct: 379 IAI----LGMDELSDEDKLAVMRARKIQRFLSQ 407 >gi|91178126|gb|ABE27298.1| mitochondrial F-ATPase beta subunit [Clavispora lusitaniae] Length = 337 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 165/307 (53%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I ++ P + + + +TGI+V+D+ P G Sbjct: 19 LGRIINVVGEPIDERGPINSKKRN-PIHTEPPSFVEQSTSAEVLETGIKVVDLLAPYARG 77 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E ++ Sbjct: 78 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMQETGVINF 136 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 137 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 194 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 195 VSALLGRIPSAVGYQPTLATDMGALQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 252 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D + E ++ S++ + ++ + Sbjct: 253 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASIVGKEHYEVASNVQQTLQAYKSLQ 312 Query: 388 DIRLIGG 394 DI I G Sbjct: 313 DIIAILG 319 >gi|226441961|gb|ACO57570.1| F1 ATP synthase beta subunit [Gillichthys seta] Length = 505 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 109 IRIPVGPETLGRIMNVIGEPIDERGPISTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 167 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 168 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 226 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 227 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 286 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 287 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 344 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 345 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAEHYDVARGVQKI 404 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 405 LQDYKSLQDIIAILG 419 >gi|321309648|ref|YP_004191977.1| ATP synthase F1 subunit beta [Mycoplasma haemofelis str. Langford 1] gi|319801492|emb|CBY92138.1| ATP synthase F1, beta subunit [Mycoplasma haemofelis str. Langford 1] Length = 474 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 164/299 (54%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR+ N LG+PID + L G L + + +PP++ Q +TGI++ID+ P G Sbjct: 93 GRMFNVLGEPID-NMPLDSG-LERKPIHALPPSLKDQSSTVSIMETGIKIIDLLIPYAKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ +++ + +S+ VGER RE + + E LK + Sbjct: 151 SKIGLFGGAGVGKTVIVTELIHNCALGHDGLSIFVGVGERSREGNDLYFEMEHSGVLKNT 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 V++ +E+P R L+ +T+AE+F +VLL +D+I RF+ + E+++ G Sbjct: 211 VLLFGQMNETPGARMRVALSGLTMAEHFRDDYCSDVLLFIDNIFRFSQAGSEVSSLLGRT 270 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P + GY ++ E+ RL ERI + G+IT++ +V V D+ DP +V + LD + Sbjct: 271 PSSVGYQPTLAYEMGRLQERI--TSTRNGSITSIQAVYVPADDITDPAPATVFAHLDAKV 328 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 VL+R +A G YP V PL S S L + + E V++ + ++ ++EE +DI I G Sbjct: 329 VLDRKIASLGIYPAVSPLQSSSNLLNPEYVGQEHYDVANRVVEILQKYEELQDIIAILG 387 >gi|298253173|ref|ZP_06976965.1| F0F1-type ATP synthase, beta subunit [Gardnerella vaginalis 5-1] gi|297532568|gb|EFH71454.1| F0F1-type ATP synthase, beta subunit [Gardnerella vaginalis 5-1] Length = 495 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 10/273 (3%) Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 138 IHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 197 Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + +S+ VGER RE + I + L+K+ +V DE P R PLTA+T+AE Sbjct: 198 NHGGVSVFAGVGERTREGNDLIGEMADAGVLEKTALVFGQMDEPPGTRLRVPLTALTMAE 257 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 258 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TST 315 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL S SR+ D Sbjct: 316 RGHSITSLQAIYVPADDYTDPAPATTFTHLDATTELSRDIAAKGIYPAVDPLTSTSRILD 375 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 376 PRYVGQAHYDCANRVKAILQRNKELQDIIALIG 408 >gi|117922561|ref|YP_871753.1| F0F1 ATP synthase subunit beta [Shewanella sp. ANA-3] gi|166222416|sp|A0L2S8|ATPB_SHESA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|117614893|gb|ABK50347.1| ATP synthase F1, beta subunit [Shewanella sp. ANA-3] Length = 463 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 157/301 (52%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG PID ++G+ + + I P + + +TGI+VID+ P Sbjct: 85 ATLGRIMNVLGDPIDEAGAIGEEERYV-IHRSAPSYEEQSNTTELLETGIKVIDLVCPFA 143 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + L Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380 Query: 394 G 394 G Sbjct: 381 G 381 >gi|318136084|gb|ADV41652.1| ATP synthase beta subunit [Anadara sp. KJP-2011] Length = 427 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 163/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 +I GR+IN +G+PID + D I ++ P + ++ +TGI+V+ Sbjct: 55 IKIPVGPATLGRIINVIGEPIDERGPVDT-DKYAAIHAEAPAFVEMSVEQEILETGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE + Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHQ 172 Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 L DN K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 173 MITSKVISLTDNTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R ++E G YP VDPL S SR+ D ++ +V+ + + Sbjct: 291 TDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSNSRILDVNVVGEKHYMVARGVQKI 350 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 351 LQDYKSLQDIIAILG 365 >gi|194037554|ref|XP_001929445.1| PREDICTED: ATP synthase subunit beta, mitochondrial [Sus scrofa] Length = 528 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|118573714|sp|Q3B6W8|ATPB1_PELLD RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 Length = 462 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 156/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G PIDG + + I P + + F+TGI+VID+ P G Sbjct: 86 LGRMLNVVGDPIDGRGPV-NATKTYSIHRSAPKFEDLSTKAEMFETGIKVIDLLEPYSRG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ + + + + VGER RE + + + + K+ Sbjct: 145 GKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWHEMMESGVIDKT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT ++IAEYF + +VLL +D+I RF + E++ G + Sbjct: 205 ALVFGQMNEPPGARARVALTGLSIAEYFRDEEHRDVLLFIDNIFRFTQAGSEVSALLGRM 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L +RI + + G++T+V ++ V D+ DP + + LD Sbjct: 265 PSAVGYQPTLATEMGELQDRI--TSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDATT 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D D+ S+ ++ R+++ +DI I G Sbjct: 323 VLSRQIAELGIYPAVDPLDSTSRILDPNVIGDDHYDTAQSVKQILQRYKDLQDIIAILG 381 >gi|4388533|emb|CAA75477.1| F1-ATP synthase, beta subunit [Sorghum bicolor] Length = 454 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 163/313 (52%), Gaps = 25/313 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+PID +GD++ + I + P + + ++ TGI+V+D+ Sbjct: 80 ATLGRIINVIGEPIDE-----RGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 134 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + + + VGER RE RE IE Sbjct: 135 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIES 194 Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF Sbjct: 195 GVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 254 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ D Sbjct: 255 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 312 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381 P + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 313 PAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQ 372 Query: 382 RFEETRDIRLIGG 394 ++ +DI I G Sbjct: 373 NYKNLQDIIAILG 385 >gi|306822066|ref|ZP_07455450.1| ATP synthase F1 sector beta subunit [Bifidobacterium dentium ATCC 27679] gi|309802574|ref|ZP_07696678.1| ATP synthase F1, beta subunit [Bifidobacterium dentium JCVIHMP022] gi|304554666|gb|EFM42569.1| ATP synthase F1 sector beta subunit [Bifidobacterium dentium ATCC 27679] gi|308220638|gb|EFO76946.1| ATP synthase F1, beta subunit [Bifidobacterium dentium JCVIHMP022] Length = 494 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 141 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 200 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 201 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 260 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 261 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 318 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 319 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 378 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 379 GQAHYDCANRVKAILQRNKELQDIIALIG 407 >gi|325293991|ref|YP_004279855.1| F0F1 ATP synthase subunit beta [Agrobacterium sp. H13-3] gi|325061844|gb|ADY65535.1| F0F1 ATP synthase subunit beta [Agrobacterium sp. H13-3] Length = 484 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + I P + + + TGI+V+D+ P G Sbjct: 97 LGRIMNVIGEPVDEAGPIVTAK-KRAIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKG 155 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK- 216 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + N+ K Sbjct: 156 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESNVNKL 214 Query: 217 -------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 + +V +E P R LT +TIAE F +G +VL +D+I RF + E+ Sbjct: 215 GGGEGSKAALVYGQMNEPPGARARVALTGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEV 274 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + KG+IT+V ++ V D+ DP + Sbjct: 275 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSVQAIYVPADDLTDPAPATSF 332 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 333 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVARKVQSTLQRYKSLQD 392 Query: 389 IRLIGG 394 I I G Sbjct: 393 IIAILG 398 >gi|313897004|ref|ZP_07830551.1| ATP synthase F1, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|320529504|ref|ZP_08030589.1| ATP synthase F1, beta subunit [Selenomonas artemidis F0399] gi|312974451|gb|EFR39919.1| ATP synthase F1, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|320138215|gb|EFW30112.1| ATP synthase F1, beta subunit [Selenomonas artemidis F0399] Length = 470 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/301 (31%), Positives = 158/301 (52%), Gaps = 8/301 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ +D + + S I P +++ + +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGETVDHNPAPVGNTESWPIHRPAPKFDDQETSTQILETGIKVVDLIAPYS 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ L+ + + + + VGER RE + + + Sbjct: 147 RGGKVGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAGVGERTREGNDLWSEMTESGVID 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 207 KTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQGQDVLLFIDNIFRFIQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +++ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 267 RMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFTHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 VL+R +AE G YP VDPL S SR+ D E ++ + ++ +++E +DI I Sbjct: 325 TTVLSRQIAELGIYPAVDPLDSTSRILDPNVIGQEHYEVARGVQAVLQKYKELQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|301059561|ref|ZP_07200473.1| ATP synthase F1, beta subunit [delta proteobacterium NaphS2] gi|300446326|gb|EFK10179.1| ATP synthase F1, beta subunit [delta proteobacterium NaphS2] Length = 469 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 158/300 (52%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV+N +G+P+DG LG + P P+ Q +TG++VID+ P Sbjct: 91 GRVLNVVGRPVDG---LGPVETKEYYPIHRPAPSFEEQDTSVNVLETGVKVIDLLVPFPR 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G ++G+F G+G+GK+ ++ + IS+ VGER RE + ++E L K Sbjct: 148 GGKMGMFGGAGVGKTVVMMEMIHNIAMQHGGISVFAGVGERTREGNDLYMEMKESGVLPK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + ++ E P R L+A+T AEY+ +G +VLL +D+I RF + E++ G Sbjct: 208 AALIYGQMTEPPGARARVALSALTAAEYYRDERGQDVLLFVDNIFRFTQAGAEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 P A GY ++ ++L L ERI + KG+IT+V V V D+ DP + + LDG Sbjct: 268 TPSAVGYQPTLGTDLGALQERI--TSTTKGSITSVQCVYVPADDLTDPAPATTFAHLDGT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394 +VL+R L E G YP VDPL S SR+ D + +E + + + +++E +DI I G Sbjct: 326 VVLSRPLTELGIYPAVDPLDSSSRILDPNFLGEEHYNTAMMVQRTLQKYKELQDIIAILG 385 >gi|114644226|ref|XP_509149.2| PREDICTED: ATP synthase subunit beta, mitochondrial isoform 2 [Pan troglodytes] Length = 529 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|24376219|ref|NP_720263.1| F0F1 ATP synthase subunit beta [Shewanella oneidensis MR-1] gi|81588954|sp|Q8E8C0|ATPB_SHEON RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|24351279|gb|AAN57706.1|AE015907_4 ATP synthase F1, beta subunit [Shewanella oneidensis MR-1] Length = 463 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 157/301 (52%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG PID ++G+ + + I P + + +TGI+VID+ P Sbjct: 85 ATLGRIMNVLGDPIDEAGAIGEEERYV-IHRAAPSYEEQSNTTELLETGIKVIDLVCPFA 143 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + L Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380 Query: 394 G 394 G Sbjct: 381 G 381 >gi|327264485|ref|XP_003217044.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Anolis carolinensis] Length = 528 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 165/319 (51%), Gaps = 25/319 (7%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTG 148 RI GR++N +G+PID +G ++ + + + PA VE+ TG Sbjct: 132 IRIPVGPETLGRIMNVIGEPIDE-----RGPITTKQFAAIHAEAPAFVEMSVEQEILVTG 186 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 187 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGND 245 Query: 202 -VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 E IE L D K +V +E P R LT +T+AEYF +G +VLL + Sbjct: 246 LYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFI 305 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V Sbjct: 306 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTQKGSITSVQAIYVP 363 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 364 ADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGQEHYDVARG 423 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 424 VQKILQDYKSLQDIIAILG 442 >gi|306774115|ref|NP_001182423.1| ATP synthase subunit beta, mitochondrial [Macaca mulatta] Length = 529 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|172036427|ref|YP_001802928.1| F0F1 ATP synthase subunit beta [Cyanothece sp. ATCC 51142] gi|171697881|gb|ACB50862.1| ATP synthase F1, beta subunit [Cyanothece sp. ATCC 51142] Length = 479 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 150/294 (51%), Gaps = 11/294 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N G+ IDG +++ +G+ + +VP P R TGI+ IDI TP+ G Sbjct: 99 GRVFNVFGETIDGKEAITEGNWRS--IHQVPLPLQQRSTTSDILATGIKAIDILTPIEQG 156 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L++ + ISL +GER RE E + L + Sbjct: 157 GKAGLFGGAGVGKTVLITEMIHNMVSQYQGISLFCGIGERNREAEELYREMQDAGVLDNT 216 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +++ DE P R A+T+AEYF + +VLL++D+I RF + +E++ G L Sbjct: 217 IMLFGQMDEPPGARFRVGHAALTMAEYFRDELKQDVLLLMDNIFRFIQAGQEVSGLMGRL 276 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P GY ++ +EL L ERI + G+IT+V +V V D+ DP A L I Sbjct: 277 PSRVGYQPTLGTELAELEERI--TNTATGSITSVQAVYVPADDFTDPAAVQTFGHLSASI 334 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 VL+R A EG YP +DPL S S++ + + + + +E+ +DI Sbjct: 335 VLSRKRASEGLYPAIDPLQSGSKMLSPTIVGERHYNIAQGIKSTLASYEDLKDI 388 >gi|38906099|gb|AAR27802.1| ATP synthase beta chain [Bifidobacterium coryneforme] gi|38906101|gb|AAR27803.1| ATP synthase beta chain [Bifidobacterium choerinum] Length = 373 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VENQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TSTRGHS 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326 >gi|183206566|gb|ACC54481.1| ATP synthase beta subunit [Campanula sarmatica] Length = 482 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 34 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 93 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 94 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 150 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ L+ + +S+ G ER RE + ++ + Sbjct: 151 KIGLFGGAGVGKTVLIMELINNIAKAHGXVSVFGGVSERTREGNDLYKEMKDSGVINEQK 210 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 211 FAETKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 270 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 271 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 328 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +DI Sbjct: 329 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQDI 388 Query: 390 RLIGG 394 I G Sbjct: 389 ITILG 393 >gi|195378829|ref|XP_002048184.1| GJ13823 [Drosophila virilis] gi|194155342|gb|EDW70526.1| GJ13823 [Drosophila virilis] Length = 611 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/315 (33%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ GR++N +G PID + K + I ++ P + + +TGI+VI Sbjct: 115 IRVPVGKVVLGRIVNVVGDPIDERGEI-KSEFYSFIHNEAPELIELNVKPEILETGIKVI 173 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ S A++ V + GER RE E Sbjct: 174 DLLAPYVKGGKIGLFGGAGVGKTVLIMELISNIAKTHGGYSVFVG-AGERTREGNDLYHE 232 Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 IE L D+ K +V +E P R LT +TIAEYF G +VLL +D+I Sbjct: 233 MIETKVISLEDDSSKVALVYGQMNEPPGARSRVVLTGLTIAEYFRDIDGQDVLLFIDNIF 292 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + + G+IT+V +V V D+ Sbjct: 293 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGMMQERI--TSTKNGSITSVQAVYVPADDL 350 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 +DP + S LD VL+R +AE G YP VDPL S SR+ D DE V+ ++ Sbjct: 351 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSTSRVLDPEIVGDEHYNVARAVQKT 410 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 411 LQGYKSLQDIIAILG 425 >gi|117927861|ref|YP_872412.1| F0F1 ATP synthase subunit beta [Acidothermus cellulolyticus 11B] gi|190358246|sp|A0LSL6|ATPB_ACIC1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|117648324|gb|ABK52426.1| ATP synthase F1 subcomplex beta subunit [Acidothermus cellulolyticus 11B] Length = 490 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 102/304 (33%), Positives = 165/304 (54%), Gaps = 22/304 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N LG+ +D +E+ + P PA ++ + + +TGI+VID+ T Sbjct: 112 GHVFNVLGQTLDVP--------RIEVTERWPIHRPAPAFDQLEAKTEMLETGIKVIDLLT 163 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVRE-FIEDYLGD 212 P G +IG+F G+G+GK+ L+ M R + F V + + VGER RE + F+E Sbjct: 164 PYVRGGKIGLFGGAGVGKTVLIQEMIHRVAKNFGGVSVFAGVGERTREGNDLFLEMTESG 223 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 + +V+V DE P R L A+T+AEYF K +VLL +D+I RF + E++T Sbjct: 224 VINDTVLVFGQMDEPPGCRLRVGLAALTMAEYFRDVKRQDVLLFIDNIFRFVQAGSEVST 283 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +IT+V ++ V D+ DP + + Sbjct: 284 LLGRMPSAVGYQPTLADEMGALQERI--TSTRGHSITSVQAIYVPADDITDPAPHTTFTH 341 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD VL+R ++E+G YP VDPL S SR+ D + +E ++ + + ++ R+++ +DI Sbjct: 342 LDATTVLSRPISEKGIYPAVDPLDSTSRILDPQFIGEEHFRVANQVKQILQRYKDLQDII 401 Query: 391 LIGG 394 I G Sbjct: 402 AILG 405 >gi|240117019|ref|ZP_04731081.1| F0F1 ATP synthase subunit beta [Neisseria gonorrhoeae PID1] gi|268602705|ref|ZP_06136872.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID1] gi|268586836|gb|EEZ51512.1| ATP synthase subunit beta [Neisseria gonorrhoeae PID1] Length = 465 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 168/333 (50%), Gaps = 23/333 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ + S VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHS-GLSVFSGVGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I G+D + D+ AV + I FL Q Sbjct: 379 IAI----LGMDELSDEDKLAVMRARKIQRFLSQ 407 >gi|157377616|ref|YP_001476216.1| F0F1 ATP synthase subunit beta [Shewanella sediminis HAW-EB3] gi|189081347|sp|A8G1W5|ATPB_SHESH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157319990|gb|ABV39088.1| ATP synthase F1, beta subunit [Shewanella sediminis HAW-EB3] Length = 458 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 160/301 (53%), Gaps = 14/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+P+D +G+ D + I + P ++ + +TGI+VID+ P G Sbjct: 83 LGRIMNVLGEPVDEAGPIGEEDRYV-IHREAPSYEDQSSSTELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF---IEDYLGDNL 214 ++G+F G+G+GK+ L++ A++ V VGER RE +F +ED L Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMED--SGVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLFFVDNIYRYTLAGTEVSALLG 258 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 259 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 316 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R++A G YP VDPL S SR D E + + + + R++E +DI I Sbjct: 317 TVVLSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVATGVQTQLQRYKELKDIIAIL 376 Query: 394 G 394 G Sbjct: 377 G 377 >gi|114695|sp|P25075|ATPB_BACFI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 467 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/330 (30%), Positives = 171/330 (51%), Gaps = 16/330 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID + + D I + P + +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGEAIDLGEPVAADDKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYI 147 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + +IS+ VGER RE + + +K Sbjct: 148 IGGKIGLFGGAGVGKTVLIQELINNIAQEHGVISVFAGVGERTREGNDLYHEMTDSGVIK 207 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 KS +V +E P R L+ +T+AE+F + G +VLL +D+I+ F + E++ G Sbjct: 208 KSAMVFGQMNEPPGARMAVALSGLTMAEHFRDRDGQDVLLFVDNIS-FTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + + G++T++ ++ V D++ DP + + LD Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR L+ + + + + + +++E +DI I Sbjct: 325 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAI- 383 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ I FL Q+ Sbjct: 384 ---LGMDELSEEDKLVVHRARRIQFFLSQN 410 >gi|187931020|ref|YP_001891004.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. mediasiatica FSC147] gi|226740203|sp|B2SEY1|ATPB_FRATM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|187711929|gb|ACD30226.1| ATP synthase, F1 sector, subunit beta [Francisella tularensis subsp. mediasiatica FSC147] Length = 458 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 12/300 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N LG+PID + + + + PPA + + +TGI+V+D+ P Sbjct: 83 LGRIMNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAK 140 Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L Sbjct: 141 GGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R L+ +TIAE F + +VL+ +D+I R+ + E++ G Sbjct: 200 KVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 260 MPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 IVL+R +AE G YP VDPL S SR D D ++ ++ ++ R++E +DI I G Sbjct: 318 IVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYEIARAVQKVLQRYKELKDIIAILG 377 >gi|159185297|ref|NP_355558.2| F0F1 ATP synthase subunit beta [Agrobacterium tumefaciens str. C58] gi|81848584|sp|Q8UC76|ATPB_AGRT5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|159140555|gb|AAK88343.2| ATP synthase beta chain [Agrobacterium tumefaciens str. C58] Length = 484 Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + I P + + + TGI+V+D+ P G Sbjct: 97 LGRIMNVIGEPVDEAGPIVTAK-KRAIHQDAPSYVEQSTEGQILVTGIKVVDLLAPYAKG 155 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK- 216 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + N+ K Sbjct: 156 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESNVNKL 214 Query: 217 -------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 + +V +E P R LT +TIAE F +G +VL +D+I RF + E+ Sbjct: 215 GGGEGSKAALVYGQMNEPPGARARVALTGLTIAENFRDEGQDVLFFVDNIFRFTQAGSEV 274 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + KG+IT+V ++ V D+ DP + Sbjct: 275 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSVQAIYVPADDLTDPAPATSF 332 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 333 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMIVGEEHYEVARKVQSTLQRYKSLQD 392 Query: 389 IRLIGG 394 I I G Sbjct: 393 IIAILG 398 >gi|318135950|gb|ADV41649.1| ATP synthase beta subunit [Chondrilla nucula] Length = 394 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID +G LS I ++ P + ++ TGI+V+D+ TP G Sbjct: 31 LGRIINVIGEPIDERGPIGADTLS-SIHAEAPEFVEMNVNQEILVTGIKVVDLLTPYAKG 89 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210 +IG+F G+G+GK+ L+ + A++ V VGER RE + + L Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMITSRVIDL 148 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 + K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 149 EGDASKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 208 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 209 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 266 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388 + LD VL+R+++E G YP VDPL S SR+ D D ++ ++ ++ +D Sbjct: 267 AHLDATTVLSRAISELGIYPAVDPLDSNSRILDPNIVGQDHYDTARNVQKVLQDYKSLQD 326 Query: 389 IRLIGG 394 I I G Sbjct: 327 IIAILG 332 >gi|312115964|ref|YP_004013560.1| ATP synthase F1 subunit beta [Rhodomicrobium vannielii ATCC 17100] gi|311221093|gb|ADP72461.1| ATP synthase F1, beta subunit [Rhodomicrobium vannielii ATCC 17100] Length = 477 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 19/308 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + K + I ++ P +++ + TGI+V+D+ P G Sbjct: 88 GRIMNVIGEPIDEAGPI-KSNQRRPIHAQAPSFVDQSTEVEVLVTGIKVVDLLAPYSKGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVR----EFIEDYLG---- 211 ++G+F G+G+GK+ L+ + + + VGER RE E IE + Sbjct: 147 KVGLFGGAGVGKTVLIQELINNIAKGHGGYSVFAGVGERTREGNDLYWEMIESKVNVDPH 206 Query: 212 ----DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 K +V +E P R LT +T+AEYF +G +VL +D+I RF + Sbjct: 207 ESGSSQGSKCSLVFGQMNEPPGARARVALTGLTVAEYFRDQGQDVLFFVDNIFRFTQAGS 266 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + Sbjct: 267 EVSALLGRIPSAVGYQPTLATDMGALQERI--TSTSKGSITSVQAIYVPADDLTDPAPAA 324 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+RS+AE+G YP VDPL S SR + +E K+ + ++ R++ Sbjct: 325 SFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRALEPRIVGEEHYKVARQVQVILQRYKAL 384 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 385 QDIIAILG 392 >gi|163785175|ref|ZP_02179863.1| F0F1 ATP synthase subunit beta [Hydrogenivirga sp. 128-5-R1-1] gi|159879556|gb|EDP73372.1| F0F1 ATP synthase subunit beta [Hydrogenivirga sp. 128-5-R1-1] Length = 477 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +GKPID + + + I P ++ + F+TGI+VID+ P G Sbjct: 96 LGRIFNVVGKPIDEAGPV-EAEEHWPIFRPAPTFEDQATKVEIFETGIKVIDLLVPFIKG 154 Query: 162 QRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 ++G+F G+G+GK+ L+ A+ V++ VGER RE + ++E L Sbjct: 155 GKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLWMEMKESGVLPY 213 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P +R T +TIAEYF + +VL+ +D+I RF + E++T G Sbjct: 214 TAMVYGQMNEPPGVRFRVAHTGLTIAEYFRDVENQDVLIFIDNIFRFVQAGAEVSTLLGR 273 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 LP A GY ++ +++ + ERI ++ G+IT++ +V V D+ DP S+ + LD Sbjct: 274 LPSAVGYQPTLGTDVGEVQERIASTKN--GSITSIQAVYVPADDITDPAPASIFAHLDAT 331 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 IVL R LAE G YP +DPL S S+ + +E V+ + ++ R++E ++I I G Sbjct: 332 IVLQRRLAELGIYPAIDPLESTSKALAPEYVGEEHYTVAREVQRILQRYKELQEIIAILG 391 >gi|1352033|sp|P29707|ATPB_PROMO RecName: Full=ATP synthase subunit beta, sodium ion specific; AltName: Full=Na(+)-translocating ATPase subunit beta gi|897798|emb|CAA41374.1| beta subunit [Propionigenium modestum] Length = 467 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 159/305 (52%), Gaps = 17/305 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIF 155 GR++N LG+P+D G++ E + + PA Q EK F+TGI+V+D+ Sbjct: 84 AVLGRILNVLGEPVDE-----AGEVKAEEYAPIHREAPAFEDQGTEKEVFETGIKVVDLL 138 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + +S+ VGER RE R+ ++ L Sbjct: 139 APYVKGGKIGLFGGAGVGKTVLIMELINNIAQGHGGLSVFAGVGERTREGRDLYDEMLES 198 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270 L K+ +V +E P R LT +T+AE F K G +VL +D+I RF + E++ Sbjct: 199 GVLDKTSLVYGQMNEPPGARLRVGLTGLTMAENFRDKEGQDVLFFVDNIFRFTQAPSEVS 258 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 259 ALLGRMPSAVGYQPNLATDMGALQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFT 316 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R +A G YP VDPL S S L + + + ++ R++E +DI Sbjct: 317 HLDATTVLSRRIASLGIYPAVDPLDSTSTALEPQIIGHEHYNTAREVQQILQRYKELQDI 376 Query: 390 RLIGG 394 I G Sbjct: 377 IAILG 381 >gi|289549061|ref|YP_003474049.1| ATP synthase F1 subunit beta [Thermocrinis albus DSM 14484] gi|289182678|gb|ADC89922.1| ATP synthase F1, beta subunit [Thermocrinis albus DSM 14484] Length = 473 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 164/311 (52%), Gaps = 11/311 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G ++ GR+ N +G+PID + + I PP + + +TGI+ Sbjct: 82 GPIKVPVGRATLGRIFNVVGQPIDEAGPV-NAEEYWPIFRDPPPLEEQSTKVEILETGIK 140 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC-FDK---VIISLVGERGREVREFI 206 VID+ P G ++G+F G+G+GK+ L+ + F K V+I VGER RE + Sbjct: 141 VIDLLEPYVKGGKVGLFGGAGVGKTVLMQELIHNIAKFHKGFSVVIG-VGERTREGNDLW 199 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 ++ L +V+V +E P +R T +T+AEYF +G +VL+ +D+I RF Sbjct: 200 KEMKESGVLPYTVMVYGQMNEPPGVRFRVAQTGITMAEYFRDVEGQDVLVFIDNIFRFVQ 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++T G LP A GY ++ +++ + ERI + +KG++T++ +V V D+ DP Sbjct: 260 AGSEVSTLLGRLPSAVGYQPTLNTDVGEVQERI--TSTKKGSLTSIQAVYVPADDITDPA 317 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 SV + LD VL+R LAE G YP +DPL S S+ LA + + + ++ R+ Sbjct: 318 PYSVFAHLDATTVLSRRLAELGIYPAIDPLESTSKYLAPEYVGEEHYNTAMEVKRILQRY 377 Query: 384 EETRDIRLIGG 394 +E ++I I G Sbjct: 378 KELQEIIAILG 388 >gi|297737737|emb|CBI26938.3| unnamed protein product [Vitis vinifera] Length = 419 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/275 (35%), Positives = 152/275 (55%), Gaps = 18/275 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+PID + K D + I + P +++ ++ TGI+V+D+ P Sbjct: 27 ATLGRIINVIGEPIDERGEI-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDLLAPYQ 85 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 86 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 144 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF + Sbjct: 145 KLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 204 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 205 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 262 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 263 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 297 >gi|88811293|ref|ZP_01126549.1| ATP synthase subunit B [Nitrococcus mobilis Nb-231] gi|88791832|gb|EAR22943.1| ATP synthase subunit B [Nitrococcus mobilis Nb-231] Length = 465 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+P+D +G + +M I + P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPVDERGPVGAKE-TMSIHRQAPAFDELAASTELLETGIKVIDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 ++G+F G+G+GK+ L++ A+ V VGER RE +F + Sbjct: 142 GKVGLFGGAGVGKTVNMLELINNIAKEHGGLSVFAG-VGERTREGNDFYHEMAESGVIKL 200 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 D+L +S V V +E P R L+ +T+AEYF +G +VLL +D+I R+ + E+ Sbjct: 201 DDLPESKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDEGRDVLLFIDNIYRYTLAGVEV 260 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + Sbjct: 261 SALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTF 318 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 LD +VL+R +AE G YP VDPL S SR D E ++ + + R++E +D Sbjct: 319 GHLDATVVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHYQVARQVQGTLQRYKELKD 378 Query: 389 IRLIGG 394 I I G Sbjct: 379 IIAILG 384 >gi|319761166|ref|YP_004125103.1| ATP synthase f1, beta subunit [Alicycliphilus denitrificans BC] gi|330823024|ref|YP_004386327.1| ATP synthase F1 subunit beta [Alicycliphilus denitrificans K601] gi|317115727|gb|ADU98215.1| ATP synthase F1, beta subunit [Alicycliphilus denitrificans BC] gi|329308396|gb|AEB82811.1| ATP synthase F1, beta subunit [Alicycliphilus denitrificans K601] Length = 469 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 108/340 (31%), Positives = 174/340 (51%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 IV +G + + G +V + G P GR+++ LG PID + + +L+ Sbjct: 51 IVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVSQ-ELTAS 109 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169 Query: 184 SDCFDKVIISLVGERGREVREFIEDY------LGDNLKKSVV--VVATSDESPILRKMAP 235 + V VGER RE +F + + ++L +S V V +E P R Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMSDSKVVVQEDLSQSKVAMVYGQMNEPPGNRLRVA 228 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT +TIAE F +G +VL +D+I R+ + E++ G +P A GY ++ E+ RL E Sbjct: 229 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 288 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL Sbjct: 289 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLD 346 Query: 356 SVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 S SR D +E V+ ++ + R++E RDI I G Sbjct: 347 STSRQLDPHVVGEEHYGVARAVQGTLQRYKELRDIIAILG 386 >gi|46909249|gb|AAT06142.1| ATP synthase beta subunit [Nucula proxima] Length = 427 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 +I GR+IN +G+PID + D I ++ P + ++ +TGI+V+ Sbjct: 55 IKIPVGPATLGRIINVIGEPIDERGPVDT-DKYAAIHAEAPAFVEMSVEQEILETGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE + + Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172 Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 L DN K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 173 MITSKVISLTDNTSKVSLVHGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R ++E G YP VDPL S SR+ D ++ +V+ + + Sbjct: 291 TDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSNSRILDVNVVGEKHYMVARGVQKI 350 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 351 LQDYKSLQDIIAILG 365 >gi|17232531|ref|NP_489079.1| F0F1 ATP synthase subunit beta [Nostoc sp. PCC 7120] gi|20141199|sp|P06540|ATPB_ANASP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|17134177|dbj|BAB76738.1| ATP synthase beta subunit [Nostoc sp. PCC 7120] Length = 482 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + ++ I P + F+TGI+V+D+ TP Sbjct: 95 ATLGRIFNVLGEPVDNRGPVNNQE-TLPIHRPAPKLTELETKPSVFETGIKVVDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210 G +IG+F G+G+GK+ ++ + +S+ VGER RE E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +NL +S +V +E P R L+ +T+AEYF +VLL +D+I RF + Sbjct: 214 NENLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ +L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + DE ++ + R++E Sbjct: 332 TFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQPNIVGDEHYNTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|256832993|ref|YP_003161720.1| ATP synthase F1, beta subunit [Jonesia denitrificans DSM 20603] gi|256686524|gb|ACV09417.1| ATP synthase F1, beta subunit [Jonesia denitrificans DSM 20603] Length = 493 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 89/273 (32%), Positives = 155/273 (56%), Gaps = 9/273 (3%) Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSD 185 + + PPA ++ + + F+TGI+ ID+ TP G +IG+F G+G+GK+ L+ ++ ++ Sbjct: 136 IHRKPPAFDQLESKTQMFETGIKSIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIYRVAN 195 Query: 186 CFDKV-IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + V + + VGER RE + I++ +K++ +V DE P R L+A+T+AE Sbjct: 196 NHNGVSVFAGVGERTREGNDLIDEMTESGVIKQTALVFGQMDEPPGTRLRVALSALTMAE 255 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 256 YFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGMLQERI--TST 313 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A G YP +DPLAS SR+ D Sbjct: 314 RGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAIDPLASTSRILD 373 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + E ++ + + ++ R +E +DI I G Sbjct: 374 PRYVGKEHYEVATQVKSILQRNKELQDIIAILG 406 >gi|222619064|gb|EEE55196.1| hypothetical protein OsJ_03042 [Oryza sativa Japonica Group] Length = 480 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+PID KGD++ + I + P + + ++ TGI+V+D+ Sbjct: 88 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 142 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 143 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 201 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 202 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 261 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 262 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 319 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 320 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 379 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 380 QNYKNLQDIIAILG 393 >gi|159905996|ref|YP_001549658.1| V-type ATP synthase subunit B [Methanococcus maripaludis C6] gi|238686989|sp|A9AAQ3|VATB_METM6 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|159887489|gb|ABX02426.1| H+transporting two-sector ATPase alpha/beta subunit central region [Methanococcus maripaludis C6] Length = 462 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/289 (33%), Positives = 149/289 (51%), Gaps = 23/289 (7%) Query: 88 FHWGRFRISPSACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRV 141 F +I S GR+ N GKP+DG + L + +S+ PP Q Sbjct: 77 FTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQ-- 134 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISL 194 TGI ID L GQ+I +F+GSG+ + L + AR + F V+ + Sbjct: 135 -----TGISTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQF-AVVFAA 188 Query: 195 VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNV 252 +G G E F++++ L+K+VV + +D+ I R + P A+T AEY + KG +V Sbjct: 189 MGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHV 248 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 L+IL +T + ++REIA E+P RGYP ++++L L ER G + +G +T + Sbjct: 249 LVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGREGTVTQIPI 308 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + + D+ PI D I +G IVL+R L +G YPPVD L S+SRLA Sbjct: 309 LTMPDDDITHPIPDLTGYITEGQIVLSRELNRKGIYPPVDILPSLSRLA 357 >gi|294939284|ref|XP_002782393.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239893999|gb|EER14188.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 524 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 158/307 (51%), Gaps = 20/307 (6%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR++N +G+PID LG + + I P V + TGI+V+D+ P Sbjct: 133 GRIMNVIGEPID---ELGPIECNTRWPIHRPAPTFSEMDTVARQLYTGIKVVDLLAPYTK 189 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL--- 214 G +IG+F G+G+GK+ ++ + + + VGER RE + + + + Sbjct: 190 GGKIGLFGGAGVGKTVVIMELINNIAMKHGGFSVFAGVGERTREGNDLYHEMIAGGVIKK 249 Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 250 DKAPGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDEEGQDVLLFIDNIFRFTQACSE 309 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++L L ERI + + G+IT+V +V V D+ DP + Sbjct: 310 VSALLGRIPSAVGYQPTLATDLGALQERI--TTTKNGSITSVQAVYVPADDLTDPAPATT 367 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD + VL+R +AE G YP VDPL S SR+ D + E V+ S+ ++ ++ + Sbjct: 368 FAHLDANTVLSRHIAELGIYPAVDPLDSTSRMLDPSIVGQEHYDVARSVQKVLQDYKSLQ 427 Query: 388 DIRLIGG 394 DI I G Sbjct: 428 DIIAILG 434 >gi|158524736|gb|ABW71262.1| mitochondrial ATP synthase beta subunit [Sagitta setosa] Length = 428 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/284 (34%), Positives = 149/284 (52%), Gaps = 16/284 (5%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G I GR+IN +G+PID + + D + I + P ++ +TGI+ Sbjct: 53 GPITIPVGPATLGRIINVIGEPIDERGPI-ETDKFLPIHQEAPEFTEMSTEQEILETGIK 111 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----V 202 V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 112 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLY 170 Query: 203 REFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDS 258 E IE L D K +V +E P R LT +T+AEYF +G +VLL +D+ Sbjct: 171 HEMIEGGVISLTDKTSKVALVYGQMNEPPGARARVCLTGLTVAEYFRDYEGQDVLLFIDN 230 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D Sbjct: 231 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPAD 288 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + DP + + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 289 DLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSSSRILD 332 >gi|326797428|ref|YP_004315248.1| ATP synthase subunit beta [Marinomonas mediterranea MMB-1] gi|326548192|gb|ADZ93412.1| ATP synthase subunit beta [Marinomonas mediterranea MMB-1] Length = 458 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + I P ++ + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDEKGPIGEEE-RWSIHRSAPSYADQSSSNELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVIDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + S LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP +DPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 LSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQMVLQRYKELKDIIAILG 377 >gi|56551137|ref|YP_161976.1| F0F1 ATP synthase subunit beta [Zymomonas mobilis subsp. mobilis ZM4] gi|81820933|sp|Q5NQY9|ATPB_ZYMMO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|56542711|gb|AAV88865.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis ZM4] Length = 484 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/319 (30%), Positives = 163/319 (51%), Gaps = 21/319 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ GR++N +G+P+D +G +M I + PP + TGI+VID Sbjct: 83 RVPVGPETLGRIMNVVGRPVDERGPIGSKQ-TMPIHADAPPFTEQSTDTAILTTGIKVID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206 + P G ++G+F G+G+GK+ L+ + + + VGER RE EF+ Sbjct: 142 LLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGFSVFAGVGERTREGNDLYHEFL 201 Query: 207 E------DYLGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 E D G+ + K +V +E P R L+ +T+AEYF +G +VL + Sbjct: 202 EAGVIASDKDGNAISEGSKVALVYGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFV 261 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ +L ERI + +KG+IT+V ++ V Sbjct: 262 DNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKKGSITSVQAIYVP 319 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375 D+ DP + + LD VL+R+++E G YP VDPL S SR + DE + Sbjct: 320 ADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLDSSSRNLEPRIVGDEHYQTARD 379 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ R++ +DI I G Sbjct: 380 VQEILQRYKNLQDIIAILG 398 >gi|150400504|ref|YP_001324270.1| V-type ATP synthase subunit B [Methanococcus aeolicus Nankai-3] gi|167016627|sp|A6UT36|VATB_META3 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|150013207|gb|ABR55658.1| H+transporting two-sector ATPase alpha/beta subunit central region [Methanococcus aeolicus Nankai-3] Length = 464 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/276 (34%), Positives = 146/276 (52%), Gaps = 9/276 (3%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ S GR+ N GKP+DG + D ++I ++RQ +TGI ID Sbjct: 83 KLGVSTDMLGRIFNGAGKPLDGGPDIIAED-KIDINGYPLNPVSRQSPNDFVQTGISTID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIE 207 L GQ+I +F+GSG+ + L + AR SD V+ + +G E F+ Sbjct: 142 GTNTLVRGQKIPIFSGSGLPHNLLAAQIARQAKVRGSDEQFAVVFAAMGITAEESNYFMN 201 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHS 265 ++ L+ +VV + +D+ I R + P A+T AEY + KG +VL+I+ IT + + Sbjct: 202 EFKRTGALENAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVIMTDITNYCEA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 +REIA E+P RGYP ++++L L ER G + + G +T + + + D+ PI Sbjct: 262 LREIAAARNEVPGRRGYPGYMYTDLATLYERAGRVKGKSGTVTQIPILTMPHDDITHPIP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 D I +G IVL+R L +G YPPVD L S+SRLA Sbjct: 322 DLTGYITEGQIVLSRELNRKGIYPPVDVLPSLSRLA 357 >gi|71018215|ref|XP_759338.1| hypothetical protein UM03191.1 [Ustilago maydis 521] gi|46099188|gb|EAK84421.1| hypothetical protein UM03191.1 [Ustilago maydis 521] Length = 523 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 20/306 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + KG+ I + P +++ + +TGI+V+D+ P G Sbjct: 139 GRIMNVIGEPMDERGPI-KGNKLAPIHVEPPAFVDQSTKAEVLETGIKVVDLLAPYARGG 197 Query: 163 RIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L+ A++ V VGER RE E IE + Sbjct: 198 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFTG-VGERTREGNDLYHEMIETGVINLE 256 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 257 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSET 314 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 315 SALLGRIPSAVGYQPTLATDMGVMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTF 372 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D A E + + + L+ ++ +D Sbjct: 373 AHLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPAVVGREHYDIATGVQKLLQDYKSLQD 432 Query: 389 IRLIGG 394 I I G Sbjct: 433 IIAILG 438 >gi|254821309|ref|ZP_05226310.1| F0F1 ATP synthase subunit beta [Mycobacterium intracellulare ATCC 13950] Length = 486 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 161/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D G+ I K PP + + +TG++V+D+ TP G Sbjct: 107 GHVFNALGHCLD-KPGYGEDLEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRGG 165 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +I +F G+G+GK+ L+ M R + + + VGER RE + ++E D LK + Sbjct: 166 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEADVLKDTA 225 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AE+F + G +VLL +D+I RF + E++T G +P Sbjct: 226 LVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 285 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + +IT++ +V V D++ DP + + LD Sbjct: 286 SAVGYQPTLADEMGELQERITSTRGK--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 343 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ +G +P VDPLAS S + D + DE ++ + ++ R+++ +DI I G Sbjct: 344 LSRSVFSKGIFPAVDPLASSSTILDPSVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 401 >gi|311113891|ref|YP_003985112.1| ATP synthase F1 sector subunit beta [Gardnerella vaginalis ATCC 14019] gi|310945385|gb|ADP38089.1| ATP synthase F1 sector beta subunit [Gardnerella vaginalis ATCC 14019] Length = 495 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 151/273 (55%), Gaps = 10/273 (3%) Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 138 IHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 197 Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AE Sbjct: 198 NHGGVSVFAGVGERTREGNDLIGEMAEAGVLEKTALVFGQMDEPPGTRLRVPLTALTMAE 257 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 258 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGALQERI--TST 315 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL S SR+ D Sbjct: 316 RGHSITSLQAIYVPADDYTDPAPATTFTHLDATTELSRDIAAKGIYPAVDPLTSTSRILD 375 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 376 PRYVGQAHYDCANRVKAILQRNKELQDIIALIG 408 >gi|332529017|ref|ZP_08404983.1| F0F1 ATP synthase subunit beta [Hylemonella gracilis ATCC 19624] gi|332041567|gb|EGI77927.1| F0F1 ATP synthase subunit beta [Hylemonella gracilis ATCC 19624] Length = 471 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/342 (30%), Positives = 171/342 (50%), Gaps = 22/342 (6%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G +V + G+ P GR+++ LG PID + + + Sbjct: 55 VVRTIALGSSDGLRRGLMVTNTGKAITVPVGKATLGRIMDVLGNPIDERGPVAQTQ-TAS 113 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 114 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 173 Query: 184 SDCFDKVIISLVGERGREVREFI----------EDYLGDNLKKSVVVVATSDESPILRKM 233 + V VGER RE +F ++ LGD+ K +V +E P R Sbjct: 174 AHSGLSVFAG-VGERTREGNDFYHEMSDAGVVNQESLGDS--KVAMVYGQMNEPPGNRLR 230 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 LT +T+AE F +G +VL +D+I R+ + E++ G +P A GY ++ E+ RL Sbjct: 231 VALTGLTMAEAFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRL 290 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 ERI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDP Sbjct: 291 QERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDP 348 Query: 354 LASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L S SR D + D ++ + R++E RDI I G Sbjct: 349 LDSTSRQLDPQVVGEDHYTTARAVQGTLQRYKELRDIIAILG 390 >gi|222087437|ref|YP_002545974.1| ATP synthase F1, beta subunit [Agrobacterium radiobacter K84] gi|221724885|gb|ACM28041.1| ATP synthase F1, beta subunit [Agrobacterium radiobacter K84] Length = 485 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 159/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D L I + P + + + TGI+V+D+ P G Sbjct: 101 LGRIMNVIGEPVDEAGPLITA-TKRSIHQEAPSYVEQSTEGQILVTGIKVVDLLAPYAKG 159 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 160 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 218 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +T+AE F +G +VL +D+I RF + E+ Sbjct: 219 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAENFRDEGQDVLFFVDNIFRFTQAGSEV 278 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + KG+IT+V ++ V D+ DP + Sbjct: 279 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATSF 336 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 337 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPLVVGEEHYEIARKVQSTLQRYKALQD 396 Query: 389 IRLIGG 394 I I G Sbjct: 397 IIAILG 402 >gi|167627186|ref|YP_001677686.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667748|ref|ZP_04755326.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876292|ref|ZP_05249002.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|189081334|sp|B0TWS7|ATPB_FRAP2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|167597187|gb|ABZ87185.1| ATP synthase F1, beta subunit [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254842313|gb|EET20727.1| F0F1 ATP synthase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 458 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 12/300 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N LG+PID + + + + PPA + + +TGI+V+D+ P Sbjct: 83 LGRIMNVLGEPIDEAGPIQYTE--TRSIHQAPPAYDELALSTEILETGIKVVDLICPFAK 140 Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L Sbjct: 141 GGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R L+ +TIAE F + +VL+ +D+I R+ + E++ G Sbjct: 200 KVALVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 260 MPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 IVL+R +AE G YP VDPL S SR D D + ++ ++ R++E +DI I G Sbjct: 318 IVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGHDHYETARAVQKVLQRYKELKDIIAILG 377 >gi|223585571|gb|ACM91675.1| F1F0-ATP synthase beta subunit [Fenneropenaeus chinensis] Length = 525 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID + S I ++ P + ++ TGI+V+D+ P G Sbjct: 139 GRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEMSVEQEILVTGIKVVDLLAPYSKGG 197 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 198 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLCHEMIESGVISLK 256 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 257 DDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 316 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 317 ALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 374 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VL+R +AE G YP VDPL S+SR+ D E V+ S+ ++ + +DI Sbjct: 375 HLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIGHEHYNVARSVQKILQDHKSLQDI 434 Query: 390 RLIGG 394 I G Sbjct: 435 IAILG 439 >gi|254455836|ref|ZP_05069265.1| ATP synthase F1, beta subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207082838|gb|EDZ60264.1| ATP synthase F1, beta subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 472 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 23/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR+IN +G+PID KG++ + + + P N Q E TGI+VID+ P Sbjct: 85 GRIINVIGEPIDE-----KGEVKTKETWPIHRSAPEFNDQSTETEILVTGIKVIDLLAPY 139 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ + + + VGER RE + + + + Sbjct: 140 AKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMIDSGVI 199 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 K+ +V +E P R LT +T+AEYF +G +VL +D+I RF + Sbjct: 200 KTDGEGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLFFVDNIFRFTQAGS 259 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + Sbjct: 260 EVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKGSITSVQAIYVPADDLTDPAPAT 317 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R +AE G YP VDPL S SR+ D DE ++ + ++ ++ Sbjct: 318 SFAHLDATTVLSRQIAEIGIYPAVDPLDSTSRILDPRIVGDEHYRVAREVQKVLQTYKSL 377 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 378 QDIIAILG 385 >gi|195327959|ref|XP_002030684.1| GM25584 [Drosophila sechellia] gi|194119627|gb|EDW41670.1| GM25584 [Drosophila sechellia] Length = 625 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 107/315 (33%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R++ GR++N +G PID D K D I ++ P + + TGI+VI Sbjct: 179 IRVAVGKAVLGRILNVVGDPID-DRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKVI 237 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A+S V + GER RE E Sbjct: 238 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 296 Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 IE L D+ K V+V +E P R LT +TIAEYF G +VLL +D+I Sbjct: 297 MIESKVISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIF 356 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + G+IT+V +V V D+ Sbjct: 357 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 414 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 +DP + S LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ Sbjct: 415 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKT 474 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 475 LQAYKSLQDIIAILG 489 >gi|257069064|ref|YP_003155319.1| ATP synthase, F1 beta subunit [Brachybacterium faecium DSM 4810] gi|256559882|gb|ACU85729.1| ATP synthase, F1 beta subunit [Brachybacterium faecium DSM 4810] Length = 495 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 159/300 (53%), Gaps = 20/300 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP---PAMNRQRVEKG---FKTGIRVIDIF 155 G V + +G P L K +EI + P A N ++E F+TGI+ ID+ Sbjct: 112 LGTVFDVVGSP------LNKSADQLEITERWPIHRKAPNFDQLESSTVMFETGIKSIDLL 165 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGD 212 TP G +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + IE+ Sbjct: 166 TPYVKGGKIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGWDLIEEMTES 225 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 ++K+ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++ Sbjct: 226 GVIEKTALVFGQMDEPPGTRLRVALSALTMAEYFRDEQSQDVLLFIDNIFRFTQAGSEVS 285 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 T G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + Sbjct: 286 TLLGRMPSAVGYQPNLADEMGVLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFA 343 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389 LD L+R +A G YP +DPLAS SR+ D + D + ++ R +E +DI Sbjct: 344 HLDATTELSREIASRGLYPAIDPLASTSRILDPRYVGQDHYDTAVRVKQILQRNKELQDI 403 >gi|225024609|ref|ZP_03713801.1| hypothetical protein EIKCOROL_01486 [Eikenella corrodens ATCC 23834] gi|224942623|gb|EEG23832.1| hypothetical protein EIKCOROL_01486 [Eikenella corrodens ATCC 23834] Length = 465 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG P+D +G D + I P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPVDEQGPIGS-DQTRAIHQFAPKFDELSSTTELLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +++AEYF + KG +VL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLSMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD +VL+R +A G YP VDPL S SR D E V+ + + +++E R Sbjct: 317 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELR 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|224368451|ref|YP_002602614.1| F0F1 ATP synthase subunit beta [Desulfobacterium autotrophicum HRM2] gi|223691167|gb|ACN14450.1| AtpD1 [Desulfobacterium autotrophicum HRM2] Length = 459 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 153/292 (52%), Gaps = 8/292 (2%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+IN G+PIDG L + +K P + R + F+TGI++ID+ +PL G + Sbjct: 85 RMINVFGQPIDGGPPLAPDTQYRPVYAKPVPLIQRTVQNEIFETGIKIIDLLSPLEKGGK 144 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 G+F G+G+GK+ +++ + +SL +GER RE E F E L K+ + Sbjct: 145 AGLFGGAGVGKTVIITEMINNMVGRYEGVSLFCGIGERCREAEELFREMKEAGVLDKTAM 204 Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V A +E+ R A+T+AE+F + +VLL++D+I R+ + E++ G +P Sbjct: 205 VFAQMNEASGARFRVGHGALTLAEFFRDTLKKDVLLLIDNIFRYIQAGSELSGLMGRIPS 264 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 GY ++ SEL L ERI G IT+V +V V D+ DP A S L IVL Sbjct: 265 HVGYQPTLASELAELEERI--CSTANGAITSVQAVYVPADDFTDPAASHTFSHLSAAIVL 322 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389 R A +G YP VDPLAS S + A S D + V ++ + +E+ +DI Sbjct: 323 ARKRASQGFYPAVDPLASNSSMLTPAIVSNDHYQTVQAVRKTLSDYEDLKDI 374 >gi|317506179|ref|ZP_07964000.1| ATP synthase F1 [Segniliparus rugosus ATCC BAA-974] gi|316255524|gb|EFV14773.1| ATP synthase F1 [Segniliparus rugosus ATCC BAA-974] Length = 482 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 166/300 (55%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG D D+ G G D + + PPA ++ + + +TGI+VID+ TP Sbjct: 104 GHVFNALG---DCLDAPGTGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 160 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ Sbjct: 161 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLKLEMEEMGVLQD 220 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF +G +VLL +D+I RF + E++T G Sbjct: 221 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGR 280 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 281 MPSAVGYQPTLADEMGQLQERITSTRGR--SITSLQAIYVPADDYTDPAPATTFAHLDAT 338 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +++ G YP VDPL S SR+ + + DE ++ + + ++ +++E +DI I G Sbjct: 339 TELSRPISQLGIYPAVDPLTSTSRILEASIVGDEHFRVANEVKRILQKYKELQDIIAILG 398 >gi|257056928|ref|YP_003134760.1| ATP synthase, F1 beta subunit [Saccharomonospora viridis DSM 43017] gi|256586800|gb|ACU97933.1| ATP synthase, F1 beta subunit [Saccharomonospora viridis DSM 43017] Length = 477 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 166/300 (55%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG+ +D G G DL + + PPA ++ + + +TG++VID+ TP Sbjct: 99 GHVYNALGECLD---EPGYGADLERWSIHRKPPAFDQLEGKTEMLETGLKVIDLLTPYVQ 155 Query: 161 GQRIGVFAGSGIGKSTLL-SMFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E + Sbjct: 156 GGKIGLFGGAGVGKTVLIKEMITRVARNFGGTSVFAGVGERTREGTDLFLEMSEDGVIND 215 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G Sbjct: 216 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGR 275 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 276 MPSAVGYQPTLADEMGVLQERITSTRGR--SITSMQAIYVPADDYTDPAPATTFAHLDAT 333 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ ++G +P VDPLAS S + D A +E ++ S + ++ +++E +DI I G Sbjct: 334 TELSRSVFQKGIFPAVDPLASSSTILDPAIVGEEHYRVASEVIRILQKYKELQDIIAILG 393 >gi|88860637|ref|ZP_01135274.1| ATP synthase subunit B [Pseudoalteromonas tunicata D2] gi|88817232|gb|EAR27050.1| ATP synthase subunit B [Pseudoalteromonas tunicata D2] Length = 461 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 154/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + M I P + + +TGI+VID+ P Sbjct: 84 ATLGRIMNVLGEPIDEAGPIGE-EERMSIHRAAPSYEEQSSSIELLETGIKVIDLVCPFA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 143 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLD 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 203 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLAEEMGVLQERI--ASTKTGSITSIQAVYVPADDLTDPSPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 321 VVLSRDIASLGIYPAVDPLDSSSRQLDPLVIGQEHYDAARGVQTVLQRYKELKDIIAILG 380 >gi|269128113|ref|YP_003301483.1| ATP synthase F1 subunit beta [Thermomonospora curvata DSM 43183] gi|268313071|gb|ACY99445.1| ATP synthase F1, beta subunit [Thermomonospora curvata DSM 43183] Length = 476 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/303 (33%), Positives = 159/303 (52%), Gaps = 18/303 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG+ +D S + + I K P + + TGI+VID+ TP G Sbjct: 98 GHVWNALGETLDVPTSSLEINERWSIHRKAPDFDQLESKTEMLVTGIKVIDLLTPYVKGG 157 Query: 163 RIGVFAGSGIGKSTLLSM--------FARSDCFDKVIISLVGERGREVRE-FIEDYLGDN 213 +IG+F G+G+GK+ L+ F + CF + VGER RE + ++E Sbjct: 158 KIGLFGGAGVGKTVLIQEMIRRVAKNFGGTSCF-----AGVGERTREGNDLWVEMAESGV 212 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272 LK +V+V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 213 LKDTVLVFGQMDEPPGTRLRVALSALTMAEYFRDVQKKDVLLFIDNIFRFTQAGSEVSTL 272 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + L Sbjct: 273 LGRMPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDITDPAPHTTFAHL 330 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRL 391 D VL R +AE+G +P VDPL S SR+ D + + ++ + ++ +++E +DI Sbjct: 331 DATTVLARPIAEKGIFPAVDPLDSTSRIMDPQVIGQEHYEVAQEVKRILQKYKELQDIIA 390 Query: 392 IGG 394 I G Sbjct: 391 ILG 393 >gi|262277907|ref|ZP_06055700.1| ATP synthase F1, beta subunit [alpha proteobacterium HIMB114] gi|262225010|gb|EEY75469.1| ATP synthase F1, beta subunit [alpha proteobacterium HIMB114] Length = 473 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/334 (31%), Positives = 167/334 (50%), Gaps = 26/334 (7%) Query: 79 EEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVP 133 E + GD V G R+ GR+IN +G+ ID KGD+ + I + P Sbjct: 62 EGLKRGDKVTDTGDAIRVPVGPETLGRIINVIGEGIDQ-----KGDVKTKEQWPIHRQAP 116 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDK 189 + + + TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ Sbjct: 117 EFVEQSTETEVLVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYS 176 Query: 190 VIISLVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIA 242 V VGER RE + + + + K+ +V +E P R LT +T+A Sbjct: 177 VFAG-VGERTREGNDLYHEMIESGVIKTDGPGSKAALVYGQMNEPPGARARVALTGLTVA 235 Query: 243 EYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 EYF K G +VL +D+I RF + E++ G +P A GY ++ +++ L ERI + Sbjct: 236 EYFRDKEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TT 293 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 KG+IT+V ++ V D+ DP + S LD VL+R +AE G YP VDPL S SR+ Sbjct: 294 TTKGSITSVQAIYVPADDLTDPAPATSFSHLDATTVLSRQIAELGIYPAVDPLDSTSRIL 353 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D DE ++ + ++ ++ +DI I G Sbjct: 354 DPRIVGDEHYRVAREVQRILQTYKSLQDIIAILG 387 >gi|90413754|ref|ZP_01221742.1| ATP synthase subunit B [Photobacterium profundum 3TCK] gi|90325223|gb|EAS41720.1| ATP synthase subunit B [Photobacterium profundum 3TCK] Length = 468 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/333 (30%), Positives = 166/333 (49%), Gaps = 16/333 (4%) Query: 75 VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 +G + + G V + GR + GR++N LG+PID +G+ + I + P Sbjct: 58 MGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGQPIDECGEIGE-EQRYAIHREAP 116 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 + + +TG++VID+ P G +IG+F G+G+GK+ + + +S Sbjct: 117 SYEEQSNATELLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLS 176 Query: 194 L---VGERGREVREF--------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIA 242 + VGER RE +F + + + K +V +E P R LT +T+A Sbjct: 177 VFAGVGERTREGNDFYFEMQEAGVVNIENPSESKVAMVYGQMNEPPGNRLRVALTGLTMA 236 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + Sbjct: 237 ERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TST 294 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + G+IT+V +V V D+ DP + + LD +VL+R +A G YP +DPL S SR+ D Sbjct: 295 KSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLD 354 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + + L+ R++E +DI I G Sbjct: 355 PLVVGQEHYDIARGVQSLLQRYKELKDIIAILG 387 >gi|310815415|ref|YP_003963379.1| ATP synthase F1, beta subunit [Ketogulonicigenium vulgare Y25] gi|308754150|gb|ADO42079.1| ATP synthase F1, beta subunit [Ketogulonicigenium vulgare Y25] Length = 473 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 105/313 (33%), Positives = 164/313 (52%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR++N +G+P+D + +S E + PA + Q TGI+VID+ Sbjct: 83 ATLGRILNVIGEPVDEKGPV----ISTETRPIHNTAPAFDEQSTSSEILVTGIKVIDLLA 138 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 139 PYSKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIE 196 Query: 208 DYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 + DNL +S V V +E P R LT +TIAE F + G +VL +D+I RF Sbjct: 197 SGVIKPDNLTESKVALVYGQMNEPPGARSRVALTGLTIAEQFRDTSGSDVLFFVDNIFRF 256 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ D Sbjct: 257 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTD 314 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381 P + + LD L+R+++E G YP VDPL S SRL D A +E V+ S+ ++ Sbjct: 315 PAPAATFAHLDATTTLSRAISEMGIYPAVDPLDSTSRLMDPAIVGEEHYAVARSVQIILQ 374 Query: 382 RFEETRDIRLIGG 394 +++ +DI I G Sbjct: 375 KYKSLQDIIAILG 387 >gi|157363033|ref|YP_001469800.1| F0F1 ATP synthase subunit beta [Thermotoga lettingae TMO] gi|190358709|sp|A8F3K2|ATPB_THELT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157313637|gb|ABV32736.1| ATP synthase F1, beta subunit [Thermotoga lettingae TMO] Length = 469 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 107/305 (35%), Positives = 172/305 (56%), Gaps = 21/305 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR++N +GKPID KGD+ E + + P + Q+ E + +TGI+VID+ P Sbjct: 88 LGRILNVVGKPIDE-----KGDIQAEDYWPIHRPAPKITEQKTEIEVLETGIKVIDLLAP 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDN 213 G +IG F G+G+GK+ L+ R+ ++ S+ VGER RE + ++E Sbjct: 143 FPKGGKIGFFGGAGVGKTVLVMELIRNIAIEQKGFSVFAGVGERTREGNDLWLEMQEAGV 202 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272 L+ +V+V +E P R LTA+TIAEYF +G +VLL +D+I RF + E++ Sbjct: 203 LENTVLVFGQMNEPPGARFRVGLTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSAL 262 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + S L Sbjct: 263 LGRMPSAVGYQPTLATDMGELQERI--TSTQKGSITSVQAIYVPADDITDPAPATTFSHL 320 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKA---WSADEKKLVSSLTHLIHRFEETRDI 389 D +VL+R +AE G YP VDPL S S++ D A W + ++ + ++ R+++ +DI Sbjct: 321 DASVVLSRKIAELGIYPAVDPLDSTSKILDPAVIGW--EHYQVARGVQEVLQRYKDLQDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|4519356|dbj|BAA75593.1| ATP synthase beta-subunit [Paulschulzia pseudovolvox] Length = 376 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + L K + ++ I K P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVD-NMGLVKVEETLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFVDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYEKAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|225424142|ref|XP_002283951.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 557 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 97/275 (35%), Positives = 152/275 (55%), Gaps = 18/275 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+PID + K D + I + P +++ ++ TGI+V+D+ P Sbjct: 165 ATLGRIINVIGEPIDERGEI-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDLLAPYQ 223 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 224 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 282 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF + Sbjct: 283 KLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 342 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 343 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 400 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 401 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 435 >gi|134045591|ref|YP_001097077.1| V-type ATP synthase subunit B [Methanococcus maripaludis C5] gi|167016630|sp|A4FXD3|VATB_METM5 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|132663216|gb|ABO34862.1| Sodium-transporting two-sector ATPase [Methanococcus maripaludis C5] Length = 462 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 106/337 (31%), Positives = 168/337 (49%), Gaps = 26/337 (7%) Query: 43 VCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99 + G+ V N D GQV+ +I + E++ + + F +I S Sbjct: 29 IAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSH 88 Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 GR+ N GKP+DG + L + +S+ PP Q TG+ ID Sbjct: 89 DMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQ-------TGVSTID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206 L GQ+I +F+GSG+ + L + AR + F V+ + +G G E F+ Sbjct: 142 GTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQF-AVVFAAMGITGEESNYFM 200 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264 +++ L+K+VV + +D+ I R + P A+T AEY + KG +VL+IL +T + Sbjct: 201 DEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCE 260 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REIA E+P RGYP ++++L L ER G + ++G +T + + + D+ PI Sbjct: 261 ALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGKEGTVTQIPILTMPDDDITHPI 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 D I +G IVL+R L +G YPPVD L S+SRLA Sbjct: 321 PDLTGYITEGQIVLSRELNRKGIYPPVDILPSLSRLA 357 >gi|32189394|ref|NP_001677.2| ATP synthase subunit beta, mitochondrial precursor [Homo sapiens] gi|114549|sp|P06576|ATPB_HUMAN RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|179281|gb|AAA51809.1| ATP synthase beta subunit precursor [Homo sapiens] gi|16741373|gb|AAH16512.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Homo sapiens] gi|119617358|gb|EAW96952.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Homo sapiens] gi|123981364|gb|ABM82511.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [synthetic construct] gi|123996207|gb|ABM85705.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [synthetic construct] gi|158255606|dbj|BAF83774.1| unnamed protein product [Homo sapiens] gi|224487773|dbj|BAH24121.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [synthetic construct] Length = 529 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|158524726|gb|ABW71257.1| mitochondrial ATP synthase beta subunit [Alcyonidium diaphanum] Length = 428 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 159/315 (50%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G PID + + D I + P ++ + TGI+V+ Sbjct: 55 IRIPVGQQTLGRIINVIGSPIDERGEI-QCDEKWPIHREAPAFVDMSVEAEILVTGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIE-- 207 D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + E Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYEEM 173 Query: 208 ------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 D G N K +V +E P R LT +T+AEYF ++G +VLL +D+I Sbjct: 174 KESKVIDLEGGN-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDAEGQDVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR+ D D + ++ L Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDANIVGHDHYNIARAVQKL 350 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 351 LQDYKSLQDIIAILG 365 >gi|152998457|ref|YP_001343292.1| F0F1 ATP synthase subunit beta [Marinomonas sp. MWYL1] gi|190358234|sp|A6W3S8|ATPB2_MARMS RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|150839381|gb|ABR73357.1| ATP synthase F1, beta subunit [Marinomonas sp. MWYL1] Length = 458 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + I P + + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDEKGPIGEEE-RWSIHRSAPSYAEQSSSNELLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + S LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP +DPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 LSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQMVLQRYKELKDIIAILG 377 >gi|28574560|ref|NP_648836.2| CG5389 [Drosophila melanogaster] gi|19527761|gb|AAL89995.1| AT04467p [Drosophila melanogaster] gi|28380508|gb|AAF49540.2| CG5389 [Drosophila melanogaster] Length = 622 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 107/315 (33%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R++ GR++N +G PID D K D I ++ P + + TGI+VI Sbjct: 176 IRVAVGKAVLGRILNVVGDPID-DRGEVKSDFYSFIHNEAPELTDLSVKPEILVTGIKVI 234 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A+S V + GER RE E Sbjct: 235 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 293 Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 IE L D+ K V+V +E P R LT +TIAEYF G +VLL +D+I Sbjct: 294 MIESKVISLEDDSSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIF 353 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + G+IT+V +V V D+ Sbjct: 354 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 411 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 +DP + S LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ Sbjct: 412 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKT 471 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 472 LQAYKSLQDIIAILG 486 >gi|321479063|gb|EFX90019.1| hypothetical protein DAPPUDRAFT_309746 [Daphnia pulex] Length = 533 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 96/282 (34%), Positives = 149/282 (52%), Gaps = 16/282 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + D I ++ P + ++ TGI+V+ Sbjct: 137 IRIPVGPETLGRIMNVIGEPIDERGPIVT-DKFAAIHAEAPEFVEMNVAQEILITGIKVV 195 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 196 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 254 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 255 MIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 314 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 315 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 372 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD VL+R++AE G YP VDPL S SR+ D Sbjct: 373 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRMMD 414 >gi|160893773|ref|ZP_02074557.1| hypothetical protein CLOL250_01327 [Clostridium sp. L2-50] gi|156864758|gb|EDO58189.1| hypothetical protein CLOL250_01327 [Clostridium sp. L2-50] Length = 453 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 159/299 (53%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCHG 161 GR+ N G +DG +L D ++ + PP+ Q V + +TGI+VID+ P G Sbjct: 77 GRLFNVTGDTLDGGPNLA--DTEHWVIHRDPPSFEDQSPVVEILETGIKVIDLLAPYAKG 134 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ ++ + I + VGER RE + + E L K+ Sbjct: 135 GKIGLFGGAGVGKTVLIQELIQNVATEHGGYSIFTGVGERSREGNDLWTEMKESGVLSKT 194 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R T +T+AEYF +VLL +D+I RF + E+++ G + Sbjct: 195 ALVFGQMNEPPGARMRVAETGLTMAEYFRDVNHQDVLLFIDNIFRFVQAGSEVSSLLGRM 254 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +EL L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 255 PSAVGYQPTLANELGELQERIASTKS--GSVTSVQAVYVPADDLTDPAPATTFAHLDATT 312 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E V+ + ++ ++ E +DI I G Sbjct: 313 VLSRKIVEQGIYPAVDPLESNSRILEVDVVGEEHYNVARGVQEILQKYRELQDIIAILG 371 >gi|47218629|emb|CAG04958.1| unnamed protein product [Tetraodon nigroviridis] Length = 517 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 121 IRIPVGPETLGRIMNVIGEPIDERGPITTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 179 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 180 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 238 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 239 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 298 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 299 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 356 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D A+ + + + Sbjct: 357 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGAEHYDVARGVQKI 416 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 417 LQDYKSLQDIIAILG 431 >gi|302542480|ref|ZP_07294822.1| ATP synthase F1, beta subunit [Streptomyces hygroscopicus ATCC 53653] gi|302460098|gb|EFL23191.1| ATP synthase F1, beta subunit [Streptomyces himastatinicus ATCC 53653] Length = 480 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 8/293 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LG+ ++ ++ + I K P + + F+TG++V+D+ TP G Sbjct: 101 GRVFNTLGEILNEPEAESEVTERWAIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS-MFARSDCFDK--VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + IE+ L ++ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIMRVAKLHEGVSVFAGVGERTREGNDLIEEMAESGVLPQTA 220 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 221 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 280 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 281 SAVGYQPNLADEMGILQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389 L+R ++E+G YP VDPL S SR+ D + S D S + ++ ++++ +DI Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYDCASRVKSILQKYKDLQDI 391 >gi|226941914|ref|YP_002796988.1| AtpB [Laribacter hongkongensis HLHK9] gi|254808155|sp|C1D5G2|ATPB_LARHH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226716841|gb|ACO75979.1| AtpB [Laribacter hongkongensis HLHK9] Length = 458 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 154/302 (50%), Gaps = 12/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+++ LG PID LG + M I P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGTPID---ELGPVATEERMPIHRAAPKFDELSASSELLETGIKVIDLLCP 137 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ + R+ + S+ VGER RE +F + N Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGFSVFTGVGERTREGNDFYHEMKESNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 198 LDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALL 257 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ + ER+ + + G+IT++ +V V D+ DP + + LD Sbjct: 258 GRMPSAVGYQPTLAEEMGKFQERV--ASTKTGSITSIQAVYVPADDLTDPSPATTFAHLD 315 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLI 392 +VL+R +A G YP VDPL S SR D DE V+ + + +++E RDI I Sbjct: 316 ATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEHYSVARGVQMTLQKYKELRDIIAI 375 Query: 393 GG 394 G Sbjct: 376 LG 377 >gi|224099437|ref|XP_002311483.1| predicted protein [Populus trichocarpa] gi|222851303|gb|EEE88850.1| predicted protein [Populus trichocarpa] Length = 559 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 105/314 (33%), Positives = 163/314 (51%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+ ID KGDL E I + P + + ++ TGI+V+D+ Sbjct: 166 ATLGRIINVIGEAIDE-----KGDLKTEHYLPIHREAPAFVEQATEQQILVTGIKVVDLL 220 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 221 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 279 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 280 SGVIKLGDQQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 339 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 340 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 397 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 398 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVL 457 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 458 QNYKNLQDIIAILG 471 >gi|188993189|ref|YP_001905199.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv. campestris str. B100] gi|190358711|sp|B0RWC2|ATPB_XANCB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|167734949|emb|CAP53161.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris] Length = 468 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRAAPSYEDQSSSTELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF S KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|170779040|gb|ACB36913.1| F1-ATP synthase beta subunit [Litopenaeus vannamei] Length = 525 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID + S I ++ P + ++ TGI+V+D+ P G Sbjct: 139 GRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEMSVEQEILVTGIKVVDLLAPYSKGG 197 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 198 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVISLK 256 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 257 DDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 316 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 317 ALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 374 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VL+R +AE G YP VDPL S+SR+ D E V+ S+ ++ + +DI Sbjct: 375 HLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIGHEHYNVARSVQKILQDHKSLQDI 434 Query: 390 RLIGG 394 I G Sbjct: 435 IAILG 439 >gi|319411542|emb|CBQ73586.1| probable ATP2-F1F0-ATPase complex, F1 beta subunit [Sporisorium reilianum] Length = 540 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 18/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + KG I + P +++ + +TGI+V+D+ P G Sbjct: 156 GRIMNVIGEPMDERGPI-KGAKLAPIHVEPPAFVDQSTKAEVLETGIKVVDLLAPYARGG 214 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE----DYLG 211 +IG+F G+G+GK+ L+ + + + VGER RE E IE + G Sbjct: 215 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFTGVGERTREGNDLYHEMIETGVINLEG 274 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E + Sbjct: 275 DS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSETS 332 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 333 ALLGRIPSAVGYQPTLATDMGVMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 390 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R +AE G YP VDPL S SR+ D A E + +S L+ ++ +DI Sbjct: 391 HLDATTVLSRGIAELGIYPAVDPLDSKSRMLDPAIVGREHYDIATSTQKLLQDYKSLQDI 450 Query: 390 RLIGG 394 I G Sbjct: 451 IAILG 455 >gi|150402226|ref|YP_001329520.1| V-type ATP synthase subunit B [Methanococcus maripaludis C7] gi|167016631|sp|A6VFZ3|VATB_METM7 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|150033256|gb|ABR65369.1| H+transporting two-sector ATPase alpha/beta subunit central region [Methanococcus maripaludis C7] Length = 462 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 107/337 (31%), Positives = 167/337 (49%), Gaps = 26/337 (7%) Query: 43 VCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99 + G+ V N D GQV+ +I + E++ + + F +I S Sbjct: 29 IAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSY 88 Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 GR+ N GKP+DG + L + +S+ PP Q TGI ID Sbjct: 89 DMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQ-------TGISTID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206 L GQ+I +F+GSG+ + L + AR + F V+ + +G G E F+ Sbjct: 142 GTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQF-AVVFAAMGITGEESNYFM 200 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264 +++ L+K+VV + +D+ I R + P A+T AEY + KG +VL+IL +T + Sbjct: 201 DEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCE 260 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REIA E+P RGYP ++++L L ER G + +G +T + + + D+ PI Sbjct: 261 ALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGREGTVTQIPILTMPDDDITHPI 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 D I +G IVL+R L +G YPPVD L S+SRLA Sbjct: 321 PDLTGYITEGQIVLSRELNRKGIYPPVDILPSLSRLA 357 >gi|47459043|ref|YP_015905.1| F0F1 ATP synthase subunit beta [Mycoplasma mobile 163K] gi|81828479|sp|Q6KI82|ATPB_MYCMO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|47458372|gb|AAT27694.1| ATP synthase beta chain [Mycoplasma mobile 163K] Length = 470 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/325 (31%), Positives = 168/325 (51%), Gaps = 16/325 (4%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 + N +G+ ID + S+ I K P + + +TGI+VID+ P G + Sbjct: 88 HMFNVIGENID-NQSIDPNTEKWSIHRKAPSYEEQTATSEILETGIKVIDLLVPYVKGGK 146 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ + +S+ VGER RE + + E L K+ + Sbjct: 147 IGLFGGAGVGKTVLVQELINNIAVHHGGLSVFAGVGERTREGNDLYYEMKASGVLDKTAL 206 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R L+ +T+AEYF + +VLL +D+I RF + E++ G +P Sbjct: 207 VFGQMNEPPGARMRVALSGLTMAEYFRDELNQDVLLFIDNIFRFTQAGSEVSALLGRMPS 266 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ +L ERI + KG+IT++ +V V D+ DP + LD VL Sbjct: 267 AVGYQPTLATEMGQLQERI--TSTRKGSITSIQAVYVPADDLTDPAPATTFIHLDAQTVL 324 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYRP 397 +R++A G YP +DPLAS SR+ +E K+ + ++ +F+E +DI I Sbjct: 325 DRNIASLGIYPAIDPLASASRMLSADIVGEEHYKIAREVQRILQKFKELQDIIAI----L 380 Query: 398 GVDLILDK---AVHQVPIIYDFLKQ 419 G+D + D+ V++ I +FL Q Sbjct: 381 GMDELSDEDKNIVYRARKIRNFLSQ 405 >gi|71897237|ref|NP_001026562.1| ATP synthase subunit beta, mitochondrial precursor [Gallus gallus] gi|82082513|sp|Q5ZLC5|ATPB_CHICK RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|53130278|emb|CAG31468.1| hypothetical protein RCJMB04_6l18 [Gallus gallus] Length = 533 Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/315 (32%), Positives = 161/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + +K TGI+V+ Sbjct: 137 IRIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEMSVEQKILVTGIKVV 195 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 196 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 254 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 255 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 314 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ Sbjct: 315 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVPADDL 372 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 373 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGPEHYDVARGVQKI 432 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 433 LQDYKSLQDIIAILG 447 >gi|260949645|ref|XP_002619119.1| ATP synthase beta chain, mitochondrial precursor [Clavispora lusitaniae ATCC 42720] gi|238846691|gb|EEQ36155.1| ATP synthase beta chain, mitochondrial precursor [Clavispora lusitaniae ATCC 42720] Length = 415 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 164/307 (53%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I ++ P + + + +TGI+V+D+ P G Sbjct: 29 LGRIINVVGEPIDERGPINSKKRN-PIHTEPPSFVEQSTSAEVLETGIKVVDLLAPYARG 87 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E ++ Sbjct: 88 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMQETGVINF 146 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 147 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 204 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 205 VSALLGRIPSAVGYQPTLATDMGALQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 262 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D + E + S++ + ++ + Sbjct: 263 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASIVGKEHYDVASNVQQTLQAYKSLQ 322 Query: 388 DIRLIGG 394 DI I G Sbjct: 323 DIIAILG 329 >gi|189485467|ref|YP_001956408.1| F0F1-type ATP synthase beta subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287426|dbj|BAG13947.1| F0F1-type ATP synthase beta subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 470 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 106/305 (34%), Positives = 172/305 (56%), Gaps = 20/305 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+PID +LGK D S++ I P M+++ + +TGI+VID+ +P Sbjct: 92 LGRIFNVLGEPID---ALGKIDDSVKRHPIHRAAPAFMDQKTSPEMLETGIKVIDLVSPF 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCF---DKVIISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ ++ R+ + + VGER RE E +E + Sbjct: 149 TKGGKIGIFGGAGVGKTVIVKELIRNIAAVHKGHSVFAGVGERTREGTDLWMEMVESKVM 208 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K+V+V +E P R LTA+T++EYF KG++VLL +D+I RFA + E++ Sbjct: 209 D---KTVLVFGQMNEPPGNRMRVALTALTMSEYFRDEKGEDVLLFIDNIFRFAQAGSEVS 265 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ L ERI + KG++T+V +V V D++ DP ++ + Sbjct: 266 ALLGRMPSAVGYQPNLAKDMGDLQERI--TSTNKGSVTSVQAVYVPADDYTDPAPVAIFA 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD + L+RS+ E+G YP V+PL S SRL D D S+ ++ ++++ +DI Sbjct: 324 HLDATLTLDRSIMEQGLYPAVNPLTSSSRLLDPNIIGEDHYNTAMSVKKILQKYKDLQDI 383 Query: 390 RLIGG 394 I G Sbjct: 384 IAILG 388 >gi|197124864|ref|YP_002136815.1| F0F1 ATP synthase subunit beta [Anaeromyxobacter sp. K] gi|220919582|ref|YP_002494886.1| ATP synthase F1, beta subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|196174713|gb|ACG75686.1| ATP synthase F1, beta subunit [Anaeromyxobacter sp. K] gi|219957436|gb|ACL67820.1| ATP synthase F1, beta subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 482 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 160/305 (52%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + ++ I P + + F+TGI+VID+ P G Sbjct: 97 GRILNVVGEPVDERGPVA-ATRTLPIHRAAPLLTDLNVKVEAFETGIKVIDLLAPYLRGG 155 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYL------GDN 213 +IG+F G+G+GK+ LL + + S+ G ER RE + + + D+ Sbjct: 156 KIGLFGGAGVGKTVLLMELVNNVAKKRGGFSVFGGVGERTREGNDLYHEMIEAGVINKDD 215 Query: 214 LKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L KS V+V +E P R L+A+T+AEYF + ++LL +D+I RF + E++ Sbjct: 216 LSKSQCVLVYGQMNEPPGARARVALSALTVAEYFRDVENRDMLLFIDNIFRFTQAGSEVS 275 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG IT+V ++ V D+ DP + + Sbjct: 276 ALLGRIPSAVGYQPTLSTEMGELQERI--TSTQKGAITSVQAIYVPADDLTDPAPATAFA 333 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VLNR L E G YP VDPL S SR+ D E V+ ++ + R+++ +DI Sbjct: 334 HLDATTVLNRKLTEIGIYPAVDPLDSTSRILDPNVVGQEHYAVARAVQETLQRYKDLQDI 393 Query: 390 RLIGG 394 I G Sbjct: 394 IAILG 398 >gi|158524728|gb|ABW71258.1| mitochondrial ATP synthase beta subunit [Flustra foliacea] Length = 428 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 160/306 (52%), Gaps = 19/306 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+ ID L + I + P + ++ +TGI+V+D+ P C G Sbjct: 65 GRIINVIGELIDERGPL-NAKATSGIHQEAPEFVEMSVEQEILETGIKVVDLLAPYCKGG 123 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE D Sbjct: 124 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVIDLK 182 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 183 GDKSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 241 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 242 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 299 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D E + + ++ ++ +D Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDANIVGHEHYNIARGVQKILQNYKSLQD 359 Query: 389 IRLIGG 394 I I G Sbjct: 360 IIAILG 365 >gi|49474710|ref|YP_032752.1| F0F1 ATP synthase subunit beta [Bartonella quintana str. Toulouse] gi|81827581|sp|Q6FYM3|ATPB_BARQU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|49240214|emb|CAF26682.1| ATP synthase beta chain [Bartonella quintana str. Toulouse] Length = 536 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 22/313 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + I K P +++ + TGI+V+D+ P Sbjct: 141 ATLGRIMNVIGEPVDNVGPIATTK-TRSIHQKAPEYVDQSTASEILVTGIKVVDLLAPYS 199 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G ++G+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 200 KGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVN 258 Query: 212 DNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 N K K +V +E P R L+ +TIAE F +G +VL +D+I RF Sbjct: 259 VNPKDNNGSTKGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRF 318 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ D Sbjct: 319 TQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAIYVPADDLTD 376 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381 P + + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ Sbjct: 377 PAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLVVGEEHYTVACQVQTILQ 436 Query: 382 RFEETRDIRLIGG 394 R+ +DI I G Sbjct: 437 RYRSLQDIIAILG 449 >gi|307244067|ref|ZP_07526186.1| ATP synthase F1, beta subunit [Peptostreptococcus stomatis DSM 17678] gi|306492591|gb|EFM64625.1| ATP synthase F1, beta subunit [Peptostreptococcus stomatis DSM 17678] Length = 466 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 159/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N LG+ ID + +G +S+ + K PA + + +TGI+V+D+ P Sbjct: 88 LGRVFNVLGEAID-LKPMPEG-VSLSPIHKEAPAYDELETKAEILETGIKVVDLLAPYLK 145 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + IS+ VGER RE + + + K Sbjct: 146 GGKIGLFGGAGVGKTVLIQELINNIAKQHGGISVFSGVGERTREGNDLYGEMTESGVINK 205 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LT +T+AE+F +G +VLL +D+I RF + E++ G Sbjct: 206 TAMVFGQMNEPPGARMRVALTGLTMAEHFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGR 265 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + S LD Sbjct: 266 MPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFSHLDAK 323 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++ G YP VDPL S SR+ D E ++ + ++ R+ E +DI I G Sbjct: 324 TVLSRQISSLGIYPAVDPLESTSRVLDPNIVGKEHYEVARGVQSILQRYRELQDIIAILG 383 >gi|224372095|ref|YP_002606467.1| V-type ATP synthase subunit B [Nautilia profundicola AmH] gi|223589167|gb|ACM92903.1| V-type ATP synthase beta chain [Nautilia profundicola AmH] Length = 442 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 90/294 (30%), Positives = 158/294 (53%), Gaps = 10/294 (3%) Query: 88 FHWGRFRISPSACWCGRVINALGKPIDG--DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145 FH +I+ S G+ ++A PIDG + + D+++ PA R+ + Sbjct: 71 FHLKPLKINLSENMVGKTLDAFANPIDGIMESVEKESDINL---GAYNPAY-REYPKNII 126 Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK--VIISLVGERGREVR 203 TG ID L GQ++ +FA SG+ ++ A +I++ +G R E Sbjct: 127 VTGFSAIDALNTLVKGQKLPIFALSGLKNDEFVAKLATQISIKNSLIILAAIGMR-FERA 185 Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRF 262 +++ + + + + V + ++E I + P TA+T AEY + KG NV++IL +T + Sbjct: 186 QYLINSISNKSSQITVFLNLANEPTINSLLLPRTALTFAEYMAFEKGKNVIVILYDMTNY 245 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A+++REI++ E+P +GYP ++S+L + ER G + +KG+IT + + + D+ Sbjct: 246 ANALREISSKKEEIPGKKGYPGYMYSDLASIYERAGIIKGKKGSITQIPVLTLPDDDITH 305 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376 PIAD I +G IV +RSL ++G +PP+D L+S+SRL + A + K+ S L Sbjct: 306 PIADLSGYITEGQIVFSRSLHKKGIFPPIDVLSSLSRLMNSAIDSTHKRFASQL 359 >gi|326332919|ref|ZP_08199176.1| ATP synthase F1, beta subunit [Nocardioidaceae bacterium Broad-1] gi|325949277|gb|EGD41360.1| ATP synthase F1, beta subunit [Nocardioidaceae bacterium Broad-1] Length = 478 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 153/298 (51%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NA G +D D S + I K P + + F+TGI+VID+ TP G Sbjct: 98 GHVFNATGDILDVDPSTVEVKERWGIHRKAPAFDQLESKTQMFETGIKVIDLLTPYVTGG 157 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218 +IG+F G+G+GK+ L+ M AR + + + VGER RE + I + + K Sbjct: 158 KIGLFGGAGVGKTVLIQEMIARVAKNHGGVSVFAGVGERTREGNDLIHEMQEAGVYDKVA 217 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 + DE P R L+A+T+AEYF +G +VLL +D+I RF + E++T G +P Sbjct: 218 LTFGQMDEPPGTRLRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 277 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 278 SAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 335 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR+ D + D + ++ R +E +DI I G Sbjct: 336 LSREIASLGIYPAVDPLTSTSRILDPQYIGQDHYDCAVRVKQILQRNKELQDIIAILG 393 >gi|114565195|ref|YP_752709.1| F0F1 ATP synthase subunit beta [Shewanella frigidimarina NCIMB 400] gi|122298241|sp|Q07VU4|ATPB1_SHEFN RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|114336488|gb|ABI73870.1| ATP synthase F1, beta subunit [Shewanella frigidimarina NCIMB 400] Length = 463 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 14/303 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + + I P ++ + +TGI+VID+ P Sbjct: 85 ATLGRIMNVLGEPIDEAGPIGEEERYV-IHRAAPSYEDQSNSTELLETGIKVIDLVCPFA 143 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF---IEDYLGD 212 G ++G+F G+G+GK+ L++ A++ V VGER RE +F +ED Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMED--SG 200 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 L K +V +E P R LT ++IAE F +G +VLL +D+I R+ + E++ Sbjct: 201 VLDKVAMVYGQMNEPPGNRLRVALTGLSIAEKFRDEGRDVLLFVDNIYRYTLAGTEVSAL 260 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + L Sbjct: 261 LGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHL 318 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D +VL+R +A G YP VDPL S SR D E + + + ++ R++E +DI Sbjct: 319 DATVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVANGVQTVLQRYKELKDIIA 378 Query: 392 IGG 394 I G Sbjct: 379 ILG 381 >gi|307327919|ref|ZP_07607101.1| ATP synthase F1, beta subunit [Streptomyces violaceusniger Tu 4113] gi|306886437|gb|EFN17441.1| ATP synthase F1, beta subunit [Streptomyces violaceusniger Tu 4113] Length = 481 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 8/293 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LGK ++ ++ + I K P + + F+TG++V+D+ TP G Sbjct: 102 GRVFNTLGKILNDPEAESEVTERWPIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 161 Query: 163 RIGVFAGSGIGKSTLLS-MFARSDCFDK--VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + IE+ L ++ Sbjct: 162 KIGLFGGAGVGKTVLIQEMIMRVAKLHEGVSVFAGVGERTREGNDLIEEMAESGVLPQTA 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 222 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP +V + LD Sbjct: 282 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPANVFAHLDATTT 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389 L+R ++E+G YP VDPL S SR+ D + S + S + ++ ++++ +DI Sbjct: 340 LSRPISEKGIYPAVDPLDSTSRILDPRYISQEHYDCASRVKSILQKYKDLQDI 392 >gi|296802110|gb|ADH51553.1| mitochondrial H+-transporting ATP synthase F1 complex beta polypeptide [Cynopterus sphinx] Length = 399 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/280 (33%), Positives = 149/280 (53%), Gaps = 16/280 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 119 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 177 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 178 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 236 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 237 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 296 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 297 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 354 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + LD VL+R++AE G YP VDPL S SR+ D +E Sbjct: 355 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNE 394 >gi|21244374|ref|NP_643956.1| F0F1 ATP synthase subunit beta [Xanthomonas axonopodis pv. citri str. 306] gi|294667261|ref|ZP_06732481.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325924759|ref|ZP_08186196.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas perforans 91-118] gi|81860488|sp|Q8PGG7|ATPB_XANAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21110032|gb|AAM38492.1| ATP synthase beta chain [Xanthomonas axonopodis pv. citri str. 306] gi|292602933|gb|EFF46364.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|325544851|gb|EGD16197.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas perforans 91-118] Length = 468 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF S KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|269914683|gb|ACJ06633.2| mitochondrial F1-ATPase beta subunit [Dimocarpus longan] Length = 558 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 17/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID K D + I + P + + ++ TGI+V+D+ P Sbjct: 166 ATLGRIMNVIGEPIDEKGEF-KTDHYLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQ 224 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---Y 209 G +IG+F G+G+GK+ L+ + + + VGER RE RE IE Sbjct: 225 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIK 284 Query: 210 LGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF + Sbjct: 285 LGDKQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQAN 344 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 345 SEVSALLGRIPSAVGYQPTLSTDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAPA 402 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R ++E G YP VDPL S SR L+ + ++ ++ ++ Sbjct: 403 TTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPNILGEEHYNTARAVQKVLQNYKN 462 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 463 LQDIIAILG 471 >gi|260771027|ref|ZP_05879955.1| ATP synthase beta chain [Vibrio furnissii CIP 102972] gi|260613916|gb|EEX39107.1| ATP synthase beta chain [Vibrio furnissii CIP 102972] gi|315178661|gb|ADT85575.1| F0F1 ATP synthase subunit beta [Vibrio furnissii NCTC 11218] Length = 467 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 153/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G +L I + P + + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGEIGAEEL-YSIHREAPSYEEQSNATELLETGVKVIDLICPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNIEK 204 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +KG+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E + + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQQTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|50307119|ref|XP_453538.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|1703697|sp|P49376|ATPB_KLULA RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|1255776|gb|AAA96150.1| F1 ATPase beta subunit [Kluyveromyces lactis] gi|49642672|emb|CAH00634.1| KLLA0D10703p [Kluyveromyces lactis] Length = 505 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I + P + + + +TGI+V+D+ P G Sbjct: 119 LGRIINVIGEPIDERGPI-NSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARG 177 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 178 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 236 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 237 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 294 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 295 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 352 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D A E + + + + ++ + Sbjct: 353 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATQVQQTLQAYKSLQ 412 Query: 388 DIRLIGG 394 DI I G Sbjct: 413 DIIAILG 419 >gi|94271708|ref|ZP_01292004.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region [delta proteobacterium MLMS-1] gi|93450366|gb|EAT01584.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region [delta proteobacterium MLMS-1] Length = 194 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 72/169 (42%), Positives = 109/169 (64%), Gaps = 1/169 (0%) Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +V+L++DS+TR+A S RE+ GE P +RGY SVF +LP+LLER G + KG+IT + Sbjct: 5 DVVLMMDSVTRYAMSSREVGLAIGEPPTSRGYTPSVFGQLPKLLERAGTCQG-KGSITGI 63 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +VLV+GD+ N+PIAD+VRSI+DGHIVL+R LA +G YP ++ SVSR SA++ Sbjct: 64 FTVLVEGDDMNEPIADAVRSIVDGHIVLSRDLAGQGHYPAIEVSGSVSRCMSDVASAEQI 123 Query: 371 KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQ 419 + +I + + D+ IG Y G + +D A+ + + +L+Q Sbjct: 124 EAAHRFLEIISLYRRSEDLINIGAYAKGSNPKIDNAIAMIDQLNGYLRQ 172 >gi|254488474|ref|ZP_05101679.1| ATP synthase F1, beta subunit [Roseobacter sp. GAI101] gi|214045343|gb|EEB85981.1| ATP synthase F1, beta subunit [Roseobacter sp. GAI101] Length = 465 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/295 (32%), Positives = 158/295 (53%), Gaps = 13/295 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ G P+DG S + + + PP + +R + +TGI+ ID+ +P+ G Sbjct: 92 GRMLDVFGAPMDGRPS--PQAVERRSIHQAPPQLSDRVLHAQILETGIKAIDLLSPIERG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LKK 216 + G+F G+G+GK+ L++ + +SL +GER RE E + +GD K Sbjct: 150 GKTGLFGGAGVGKTVLITELINNTVQHYKGVSLFCGIGERSREAEELYRE-IGDAGVRDK 208 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 +V++ +E+P +R + TA+T+AEYF G +VLL++D+I RF + E++ G Sbjct: 209 TVMLFGQMNEAPGVRFLVGNTALTMAEYFRDDLGQDVLLLIDNIFRFVQAGSEVSGLMGR 268 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P GY ++ +EL L ERI + + IT++ +V V D+ DP A + S L Sbjct: 269 MPSRVGYQPTLATELAALEERI--TSTSQAAITSIQAVYVPADDFTDPAAAHIFSHLSAS 326 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 +VL+R A EG YP VDPLAS S + A + ++ + +EE RDI Sbjct: 327 VVLSRKRASEGLYPSVDPLASASVMLTPAVVGQRHYDIARAVRRTLSEYEELRDI 381 >gi|115465323|ref|NP_001056261.1| Os05g0553000 [Oryza sativa Japonica Group] gi|84028177|sp|Q01859|ATPBM_ORYSJ RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|49328022|gb|AAT58723.1| putative ATP synthase beta chain [Oryza sativa Japonica Group] gi|50878425|gb|AAT85199.1| putative ATP synthase beta chain [Oryza sativa Japonica Group] gi|113579812|dbj|BAF18175.1| Os05g0553000 [Oryza sativa Japonica Group] gi|215692634|dbj|BAG88054.1| unnamed protein product [Oryza sativa Japonica Group] Length = 552 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+PID KGD++ + I + P + + ++ TGI+V+D+ Sbjct: 160 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 214 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 215 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 273 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 274 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 333 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 334 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 391 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 392 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 451 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 452 QNYKNLQDIIAILG 465 >gi|86160763|ref|YP_467548.1| F0F1 ATP synthase subunit beta [Anaeromyxobacter dehalogenans 2CP-C] gi|118573504|sp|Q2IHQ2|ATPB_ANADE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|85777274|gb|ABC84111.1| ATP synthase F1 subcomplex beta subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 482 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 160/305 (52%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + ++ I P + + F+TGI+VID+ P G Sbjct: 97 GRILNVVGEPVDERGPVAATK-TLPIHRSAPLLTDLNVKVESFETGIKVIDLLAPYLRGG 155 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGREVREFIEDYL------GDN 213 +IG+F G+G+GK+ LL + + S+ G ER RE + + + D+ Sbjct: 156 KIGLFGGAGVGKTVLLMELVNNVAKKRGGFSVFGGVGERTREGNDLYHEMIEAGVINKDD 215 Query: 214 LKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L KS V+V +E P R L+A+T+AEYF + ++LL +D+I RF + E++ Sbjct: 216 LSKSQCVLVYGQMNEPPGARARVALSALTVAEYFRDVENRDMLLFIDNIFRFTQAGSEVS 275 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG IT+V ++ V D+ DP + + Sbjct: 276 ALLGRIPSAVGYQPTLSTEMGELQERI--TSTQKGAITSVQAIYVPADDLTDPAPATAFA 333 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VLNR L E G YP VDPL S SR+ D E V+ ++ + R+++ +DI Sbjct: 334 HLDATTVLNRKLTEIGIYPAVDPLDSTSRILDPNVVGKEHYAVARAVQETLQRYKDLQDI 393 Query: 390 RLIGG 394 I G Sbjct: 394 IAILG 398 >gi|46909263|gb|AAT06149.1| ATP synthase beta subunit [Saccoglossus kowalevskii] Length = 427 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 149/273 (54%), Gaps = 18/273 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID + D I + P + + ++ +TGI+ +D+ P C G Sbjct: 65 GRIINVIGEPIDERGPI-PTDRRSGIHQEAPEFVEMKVEQEILETGIKWVDLLAPYCKGG 123 Query: 163 RIGVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L ++ A++ V VGER RE E IE D Sbjct: 124 KIGLFGGAGVGKTVLFLELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIDLK 182 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 183 GDGSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 241 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 242 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 299 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 332 >gi|113170421|ref|YP_717213.1| AtpB [Ostreococcus tauri] gi|118573712|sp|Q0P3P2|ATPB_OSTTA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|112806828|emb|CAL36335.1| AtpB - contains Intron II [Ostreococcus tauri] Length = 483 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 19/308 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D ++ + + I P ++ F+TGI+V+D+ P G Sbjct: 98 GRIFNVLGEPVDELGAVSTPEGMLPIHRAAPAFVDLDTNLSIFETGIKVVDLLAPYRRGG 157 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYLGD- 212 +IG+F G+G+GK+ L+ ++ K + + VGER RE +E E + D Sbjct: 158 KIGLFGGAGVGKTVLIMELIVNNNIAKAHGGVSVFAGVGERTREGNDLYQEMCESKVIDT 217 Query: 213 -NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 NL S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 218 ANLANSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFVDNIFRFVQAGSE 277 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 278 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKTGSITSIQAVYVPADDLTDPAPATT 335 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + + W D + + R++E Sbjct: 336 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDDHYDTAQGVKQTLQRYKEL 394 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 395 QDIIAILG 402 >gi|319997188|gb|ADV91188.1| mitochondrial ATP synthase F1 beta subunit-like protein 1 [Karlodinium micrum] Length = 514 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 156/316 (49%), Gaps = 20/316 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 R+ GR+IN +G+PID LG D S I P TGI+V Sbjct: 116 RVPVGEGTLGRIINIIGEPID---ELGPIDSNKSYPIHRPAPVFTEMNTSAAQLLTGIKV 172 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIED 208 +D+ P G +IG+F G+G+GK+ ++ + + + VGER RE + + Sbjct: 173 VDLLAPYAKGGKIGLFGGAGVGKTVVIMELIHNIALKHGGYSVFAGVGERTREGNDLYHE 232 Query: 209 YLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 + + K+ +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 233 MMASGVIKENKAPGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFVDNI 292 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ ++L L ERI + +KG+IT+V +V V D+ Sbjct: 293 FRFTQAGSEVSALLGRIPSAVGYQPTLATDLASLQERI--TTTQKGSITSVQAVYVPADD 350 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH- 378 DP + + LD VL+R +AE G YP VDPL S SR+ D + V+ T Sbjct: 351 LTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPSIVGQRHYDVARSTQK 410 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 411 ILQDYKSLQDIIAILG 426 >gi|296802108|gb|ADH51552.1| mitochondrial H+-transporting ATP synthase F1 complex beta polypeptide [Miniopterus fuliginosus] Length = 486 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 115 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 173 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 174 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 232 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 233 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 292 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 293 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 350 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 351 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 410 Query: 389 IRLIGG 394 I I G Sbjct: 411 IIAILG 416 >gi|288816879|gb|ADC55252.1| mitochondrial ATP synthase subunit beta precursor [Litopenaeus vannamei] Length = 525 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID + S I ++ P + ++ TGI+V+D+ P G Sbjct: 139 GRIINVIGEPIDERGPIPTEHFSA-IHAEAPDFVEMSVEQEILVTGIKVVDLLAPYSKGG 197 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 198 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVISLK 256 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 257 DDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVS 316 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 317 ALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 374 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VL+R +AE G YP VDPL S+SR+ D E V+ S+ ++ + +DI Sbjct: 375 HLDATTVLSRGIAELGIYPAVDPLDSISRIMDANIIGHEHYNVARSVQKILQDHKSLQDI 434 Query: 390 RLIGG 394 I G Sbjct: 435 IAILG 439 >gi|23503631|dbj|BAC20412.1| ATP synthase beta-subunit [Gungnir neglectum] Length = 376 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + ++ I + P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NLGPVQANSTLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R+ Sbjct: 264 ATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYASAQSVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|84494526|ref|ZP_00993645.1| ATP synthase subunit B [Janibacter sp. HTCC2649] gi|84384019|gb|EAP99899.1| ATP synthase subunit B [Janibacter sp. HTCC2649] Length = 487 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 161/305 (52%), Gaps = 19/305 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGD-----LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 G+V N G+ ++ L +G+ L I K P + + F+TGI++ID+ T Sbjct: 105 LGKVFNTTGEVMN----LAEGETFEPSLRWGIHRKAPAFDQLESKTEMFETGIKIIDLMT 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGD 212 P G +IG+F G+G+GK+ L+ M AR D + + VGER RE + +E Sbjct: 161 PYVQGGKIGLFGGAGVGKTVLIQEMIARVARDHGGVSVFAGVGERTREGNDLMVEMEEAG 220 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 L ++ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 221 VLGQTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVST 280 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN-ITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + +GN IT++ ++ V D++ DP + + Sbjct: 281 LLGRMPSAVGYQPTLADEMGTLQERITST---RGNSITSMQAIYVPADDYTDPAPATTFA 337 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDI 389 LD L+R +A G YP VDPL S SR+ D+ + A D + ++ R +E +DI Sbjct: 338 HLDATTELSREIASLGIYPAVDPLTSTSRILDRRYIAEDHYNTAVRIKSILQRNKELQDI 397 Query: 390 RLIGG 394 I G Sbjct: 398 IAILG 402 >gi|77920579|ref|YP_358394.1| F0F1 ATP synthase subunit beta [Pelobacter carbinolicus DSM 2380] gi|123729376|sp|Q3A083|ATPB2_PELCD RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|77546662|gb|ABA90224.1| ATP synthase F1, beta subunit [Pelobacter carbinolicus DSM 2380] Length = 474 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/293 (34%), Positives = 150/293 (51%), Gaps = 9/293 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N G+PID + G +++K R + F TGI+ ID+ PL G Sbjct: 89 GRVFNVFGQPIDRREP-PDGCRWRSVLTKPAGLTERSSKTEMFITGIKAIDVLAPLERGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ L++ + +SL +GER RE E F E L +V Sbjct: 148 KAGLFGGAGVGKTVLITELIHNMVGQHEGVSLFCGIGERCREGEELFREMREAGVLDNTV 207 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LTA+T+AEYF +G +VLL++D+I RF + EI+ G +P Sbjct: 208 MVFGQMNEPPGARFRVGLTALTMAEYFRDDQGRDVLLLIDNIFRFIQAGMEISGLLGLMP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +EL L ERI S IT++ +V V D+ DP A S L IV Sbjct: 268 SRLGYQPTMGTELAELQERI--SSTRHAAITSIQAVYVPADDFTDPAAVHTFSHLSASIV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R A EG YP +DPLAS S + + + +L + + +EE +DI Sbjct: 326 LSRRRASEGLYPAIDPLASTSNILNPRIVGERHYRLAQEIRRTLATYEELKDI 378 >gi|23503617|dbj|BAC20405.1| ATP synthase beta-subunit [Chlamydomonas tetragama] Length = 376 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + +G+ ++ I + P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNLGPVKQGE-TLPIHRQAPLFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK + S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYQTAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|318042250|ref|ZP_07974206.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CB0101] Length = 486 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + I + P + + K F+TGI+VID+ P Sbjct: 95 ATLGRIFNVLGEPVDEQGPVST-TTTAPIHREAPKLTDLETKPKVFETGIKVIDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + +S+ VGER RE + E++ Sbjct: 154 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFAGVGERTREGNDLYEEFKESGVIN 213 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 214 PDDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + A DE + ++ + R++E Sbjct: 332 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|307294136|ref|ZP_07573980.1| ATP synthase F1, beta subunit [Sphingobium chlorophenolicum L-1] gi|306880287|gb|EFN11504.1| ATP synthase F1, beta subunit [Sphingobium chlorophenolicum L-1] Length = 481 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/313 (30%), Positives = 159/313 (50%), Gaps = 21/313 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + + LS I +K P +++ TGI+VID+ P Sbjct: 86 ATLGRILNVVGEPIDERGPV-ETTLSAPIHAKAPEFVDQSTDASILVTGIKVIDLLAPYA 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + + + VGER RE + ++L + Sbjct: 145 KGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGERTREGNDLYHEFLDAGVIA 204 Query: 215 -----------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 K +V +E P R L+ +TIAEYF +G +VL +D+I RF Sbjct: 205 KDADGNAISEGSKVALVYGQMNEPPGARARVALSGLTIAEYFRDQEGQDVLFFVDNIFRF 264 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ D Sbjct: 265 TQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTNKGSITSVQAVYVPADDLTD 322 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381 P + + LD VLNR+++E G YP VDPL S SR L + + + ++ ++ Sbjct: 323 PAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRVLEPRVVGQEHYETARAVQAILQ 382 Query: 382 RFEETRDIRLIGG 394 +++ +DI I G Sbjct: 383 KYKSLQDIIAILG 395 >gi|91178104|gb|ABE27287.1| mitochondrial F-ATPase beta subunit [Candida catenulata] Length = 337 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 104/310 (33%), Positives = 166/310 (53%), Gaps = 28/310 (9%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR+IN +G+PID +G + + + + PP+ Q VE + +TGI+V+D+ P Sbjct: 20 GRIINVVGEPIDE-----RGPIQCKQRNPIHAEPPSFTEQSVEAEVLETGIKVVDLLAPY 74 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE--- 207 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E Sbjct: 75 ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV 133 Query: 208 -DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 134 INLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQA 191 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP Sbjct: 192 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAP 249 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SRL D + + + + + + ++ Sbjct: 250 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVEVVGQEHYDVATGVQECLQAYK 309 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 310 SLQDIIAILG 319 >gi|300932367|ref|ZP_07147632.1| ATP synthase F1, beta subunit [Escherichia coli MS 187-1] gi|300459872|gb|EFK23365.1| ATP synthase F1, beta subunit [Escherichia coli MS 187-1] Length = 460 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 153/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMNVLGEPVDMKGEIGEEE-RWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFA 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVID 201 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 202 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 MPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDAT 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP V PL S SR D E + ++ R++E +DI I G Sbjct: 320 VVLSRQIASLGIYPAVAPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILG 379 >gi|294101807|ref|YP_003553665.1| H(+)-transporting two-sector ATPase [Aminobacterium colombiense DSM 12261] gi|293616787|gb|ADE56941.1| H(+)-transporting two-sector ATPase [Aminobacterium colombiense DSM 12261] Length = 473 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 105/351 (29%), Positives = 175/351 (49%), Gaps = 18/351 (5%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+V+ I D +V + G +I L F + S GR+ N G+PIDG Sbjct: 43 GRVLEITSDRALVQVFEGTDGIDIKNTKLRFLGKVLTLPVSRDMLGRIFNGRGEPIDGGA 102 Query: 118 S-LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 L L + M P +R + +TGI ID P+ GQ++ +F+GSG+ + Sbjct: 103 PILPDAKLDINGMPMNP--FSRDYPSEFIQTGISTIDGMNPMVRGQKLPIFSGSGLPHNR 160 Query: 177 LLSMFARSDCFDK------VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + + AR V+ + +G E F+ED+ ++++V+ V +D+ I Sbjct: 161 MAAQIARQATVISGHEDFAVVFAAMGITFEEASFFMEDFRRTGAIQRTVMFVNLADDPAI 220 Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + + D +V++IL +T + ++REI+ E+P RGYP +++ Sbjct: 221 ERITTPRLALTAAEYLAFEQDMHVVVILTDLTNYCEALREISAARKEVPGRRGYPGYLYT 280 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L + ER G + +KG+IT + + + D+ PI D I +G I+L+R L +G Y Sbjct: 281 DLATMYERAGRLKGKKGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRGLHRKGIY 340 Query: 349 PPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 PPVD + S+SRL DK D L++ L R +E +++ +I G Sbjct: 341 PPVDVMPSLSRLKDKGIGREKTREDHADLMNQLFAAYARGKEAKELAVILG 391 >gi|294012671|ref|YP_003546131.1| F-type H+-transporting ATPase beta chain [Sphingobium japonicum UT26S] gi|292676001|dbj|BAI97519.1| F-type H+-transporting ATPase beta chain [Sphingobium japonicum UT26S] Length = 481 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/313 (30%), Positives = 159/313 (50%), Gaps = 21/313 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + + LS I +K P +++ TGI+VID+ P Sbjct: 86 ATLGRILNVVGEPIDERGPV-ETTLSAPIHAKAPEFVDQSTDASILVTGIKVIDLLAPYA 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + + + VGER RE + ++L + Sbjct: 145 KGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGERTREGNDLYHEFLDAGVIA 204 Query: 215 -----------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 K +V +E P R L+ +TIAEYF +G +VL +D+I RF Sbjct: 205 KDADGNAISEGSKVALVYGQMNEPPGARARVALSGLTIAEYFRDQEGQDVLFFVDNIFRF 264 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ D Sbjct: 265 TQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTNKGSITSVQAVYVPADDLTD 322 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381 P + + LD VLNR+++E G YP VDPL S SR L + + + ++ ++ Sbjct: 323 PAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRVLEPRVVGQEHYETARAVQAILQ 382 Query: 382 RFEETRDIRLIGG 394 +++ +DI I G Sbjct: 383 KYKSLQDIIAILG 395 >gi|148223359|ref|NP_001080126.1| mitochondrial ATP synthase beta subunit [Xenopus laevis] gi|28436792|gb|AAH46741.1| Atp5b protein [Xenopus laevis] Length = 525 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/282 (33%), Positives = 149/282 (52%), Gaps = 16/282 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 129 IRIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 187 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 188 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 246 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 247 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 306 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 307 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 364 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD VL+R++AE G YP VDPL S SR+ D Sbjct: 365 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 406 >gi|226487050|emb|CAX75390.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Schistosoma japonicum] Length = 517 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 164/305 (53%), Gaps = 28/305 (9%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N +G+PID +G + ++MS + P ++ ++ +TGI+V+D+ P Sbjct: 131 GRIMNVIGEPIDE-----RGPIKTKMMSGIHQDAPNFIDMSTEQEILETGIKVVDLLAPY 185 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------I 206 G +IG+F G+G+GK+ L+ + AR+ V VGER RE + + Sbjct: 186 VKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREGNDLYHEMITTGV 244 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 D G+N K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 245 IDLKGNNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFVDNIFRFTQA 303 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP Sbjct: 304 GSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTKKGSITSVQAIYVPADDLTDPAP 361 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R++AE G YP VDPL S SR+ D +E V+ I +E Sbjct: 362 ATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDPNIVGEEHYSVARGVQKI--LQE 419 Query: 386 TRDIR 390 R ++ Sbjct: 420 NRSLQ 424 >gi|194751241|ref|XP_001957935.1| GF23766 [Drosophila ananassae] gi|190625217|gb|EDV40741.1| GF23766 [Drosophila ananassae] Length = 638 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 105/315 (33%), Positives = 164/315 (52%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R++ GR++N +G PID + + K + I ++ P ++ + TGI+VI Sbjct: 178 IRVAVGKSVLGRILNVVGDPIDDREPI-KSEFYSFIHNEAPELVDLTVKPEILVTGIKVI 236 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A+S V + GER RE E Sbjct: 237 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 295 Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 IE L D+ K V+V +E P R LT +TIAEYF G +VLL +D+I Sbjct: 296 MIESKVISLEDDTSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDMDGQDVLLFIDNIF 355 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + G+IT+V +V V D+ Sbjct: 356 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 413 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 +DP + S LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ Sbjct: 414 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDIVGEEHYNVARAVQKT 473 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 474 LQSYKSLQDIIAILG 488 >gi|170747037|ref|YP_001753297.1| F0F1 ATP synthase subunit beta [Methylobacterium radiotolerans JCM 2831] gi|170653559|gb|ACB22614.1| ATP synthase F1, beta subunit [Methylobacterium radiotolerans JCM 2831] Length = 484 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 159/311 (51%), Gaps = 25/311 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + + + P+ Q E TGI+V+D+ P G Sbjct: 96 GRIMNVIGEPIDEAGPVQA--TTYRAIHQPAPSYAEQSTEAQILVTGIKVVDLLAPYAKG 153 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYLGD 212 +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + Sbjct: 154 GKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESKVNV 211 Query: 213 NLK--------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264 + K K +V +ESP R LT +TIAE F G +VL +D+I RF Sbjct: 212 DPKEHGSAEGSKCALVYGQMNESPGARSRVALTGLTIAEQFRDDGQDVLFFVDNIFRFTQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 272 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383 + + LD VL+RS+AE+G YP VDPL S SR+ A +E V+ + + R+ Sbjct: 330 PAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPAILGEEHYDVARRVQQTLQRY 389 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 390 KALQDIIAILG 400 >gi|91178114|gb|ABE27292.1| mitochondrial F-ATPase beta subunit [Candida haemulonis] Length = 337 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 163/307 (53%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K I + P + + + +TGI+V+D+ P G Sbjct: 19 LGRIINVIGEPIDERGPI-KSKKRNPIHTDPPTFVEQSTSAEVLETGIKVVDLLAPYARG 77 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E ++ Sbjct: 78 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMQETGVINF 136 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 137 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 194 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 195 VSALLGRIPSAVGYQPTLATDMGTLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 252 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D + E + +++ + ++ + Sbjct: 253 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGKEHYDVATNVQQTLQAYKSLQ 312 Query: 388 DIRLIGG 394 DI I G Sbjct: 313 DIIAILG 319 >gi|89257058|ref|YP_514420.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. holarctica LVS] gi|115315414|ref|YP_764137.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. holarctica OSU18] gi|156503268|ref|YP_001429333.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. holarctica FTNF002-00] gi|167009445|ref|ZP_02274376.1| ATP synthase F1, beta subunit [Francisella tularensis subsp. holarctica FSC200] gi|254368297|ref|ZP_04984316.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica 257] gi|254369895|ref|ZP_04985904.1| ATP synthase [Francisella tularensis subsp. holarctica FSC022] gi|290953659|ref|ZP_06558280.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. holarctica URFT1] gi|295312976|ref|ZP_06803685.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. holarctica URFT1] gi|118573537|sp|Q2A1I2|ATPB_FRATH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|122324600|sp|Q0BK84|ATPB_FRATO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166201704|sp|A7NEH4|ATPB_FRATF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|89144889|emb|CAJ80234.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica LVS] gi|115130313|gb|ABI83500.1| H(+)-transporting two-sector ATPase [Francisella tularensis subsp. holarctica OSU18] gi|134254106|gb|EBA53200.1| ATP synthase beta chain [Francisella tularensis subsp. holarctica 257] gi|156253871|gb|ABU62377.1| ATP synthase F1, beta subunit [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122865|gb|EDO66982.1| ATP synthase [Francisella tularensis subsp. holarctica FSC022] Length = 458 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 159/300 (53%), Gaps = 12/300 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N LG+PID + + + + PPA + + +TGI+V+D+ P Sbjct: 83 LGRIMNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAK 140 Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ L++ A+ V S VGER RE +F + N L Sbjct: 141 GGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVF-SGVGERTREGNDFYYEMKYSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R L+ +TIAE F + +VL+ +D+I R+ + E++ G Sbjct: 200 KVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 260 MPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 IVL+R +AE G YP VDPL S SR D D + ++ ++ R++E +DI I G Sbjct: 318 IVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKDIIAILG 377 >gi|54113605|gb|AAV29436.1| NT02FT1772 [synthetic construct] Length = 458 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 12/299 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N LG+PID + + + + PPA + + +TGI+V+D+ P G Sbjct: 84 GRIMNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L+ +TIAE F + +VL+ +D+I R+ + E++ G + Sbjct: 201 VSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGRM 260 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD I Sbjct: 261 PSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDATI 318 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR D D + ++ ++ R++E +DI I G Sbjct: 319 VLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKDIIAILG 377 >gi|33519491|ref|NP_878323.1| F0F1 ATP synthase subunit beta [Candidatus Blochmannia floridanus] gi|81666731|sp|Q7VQV6|ATPB_BLOFL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|33517154|emb|CAD83536.1| ATP synthase beta subunit [Candidatus Blochmannia floridanus] Length = 464 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 97/297 (32%), Positives = 154/297 (51%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG PID + + I P ++ TGI+VID+ P G Sbjct: 90 GRVMDVLGNPIDMKGPINSIE-KWSIHRSAPLYEELSSNQELLITGIKVIDLMCPFIKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ + R+ + S+ VGER RE +F + + L K Sbjct: 149 KIGLFGGAGVGKTVNIMELIRNIAIEHAGYSVFVGVGERIREGNDFYHEMIHSGILDKVA 208 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G +P Sbjct: 209 LVYGQMNEPPGNRLRVALTGLTIAEKFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRVPS 268 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY +++ E+ L ERI + + G+IT+V ++ V D+ DP + + LD IVL Sbjct: 269 AVGYQSTLSEEMGMLQERIAST--KSGSITSVQAIYVPADDLTDPSPTTTFAHLDATIVL 326 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPL S S+ D E + +++ ++ R++E +DI I G Sbjct: 327 SRQIAALGIYPAVDPLDSYSKQLDPCIVGQEHYDIANNVKSILQRYQELKDIIAILG 383 >gi|326492854|dbj|BAJ90283.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 554 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 162/313 (51%), Gaps = 25/313 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+PID KGD+ + I + P + + ++ TGI+V+D+ Sbjct: 163 ATLGRIINVIGEPIDH-----KGDIKTHDYLPIHREAPAFVEQATEQQILVTGIKVVDLL 217 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + + + VGER RE RE IE Sbjct: 218 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIES 277 Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 L D +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF Sbjct: 278 GVIKLDDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 337 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ D Sbjct: 338 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 395 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381 P + + LD VL+RS++E G YP VDPL S SR L+ D + ++ Sbjct: 396 PAPATTFAHLDATTVLSRSISELGIYPAVDPLDSTSRMLSPHVLGMDHYNTARGVQKVLQ 455 Query: 382 RFEETRDIRLIGG 394 ++ +DI I G Sbjct: 456 NYKNLQDIIAILG 468 >gi|328954799|ref|YP_004372132.1| ATP synthase F1 subcomplex beta subunit [Coriobacterium glomerans PW2] gi|328455123|gb|AEB06317.1| ATP synthase F1 subcomplex beta subunit [Coriobacterium glomerans PW2] Length = 484 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/329 (31%), Positives = 168/329 (51%), Gaps = 15/329 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+DG + G+ + I P + F+TGI+ +D+ P Sbjct: 104 ATLGRIWNVLGEPVDGKPA-GQIEERYPIHHAAPTFDELTTNMEIFETGIKAVDLLEPYI 162 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215 G + G+F G+G+GK+ L+ + + + VGER RE + ++E L Sbjct: 163 RGGKTGLFGGAGVGKTVLIQELIYNLAQQHGGTSVFTGVGERTREGTDLYLEMKESGVLD 222 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K+ +V +E P R L +T AEYF +G +VLL +D+I RF+ + E++ G Sbjct: 223 KTCLVYGQMNEPPGARLRVGLAGLTTAEYFRDRGQDVLLFIDNIFRFSQAGSEVSALLGR 282 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 283 MPSAVGYQPTLATEMGDLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDST 340 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 VL+R++A G YP +DPLAS S D + V+S + L+ ++ + +DI I Sbjct: 341 TVLSRNIASLGLYPAIDPLASTSDALDPDIVGERHYSVASKVQELLQQYADLQDIIAI-- 398 Query: 395 YRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ V++ I FL QS Sbjct: 399 --LGMDELSDEQRTTVNRARKIQQFLSQS 425 >gi|171060196|ref|YP_001792545.1| F0F1 ATP synthase subunit beta [Leptothrix cholodnii SP-6] gi|170777641|gb|ACB35780.1| ATP synthase F1, beta subunit [Leptothrix cholodnii SP-6] Length = 474 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 160/314 (50%), Gaps = 29/314 (9%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+++ LG PID +G +SME I K P + +TGI+VID+ Sbjct: 89 ATLGRIMDVLGNPIDE-----RGPVSMELSASIHRKAPAYDELSPSQDLLETGIKVIDLI 143 Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY-- 209 P G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 144 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMAD 202 Query: 210 --------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITR 261 LG++ K +V +E P R LT +TIAE F +G +VL +D+I R Sbjct: 203 SGVVNLESLGES--KVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYR 260 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 + + E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ Sbjct: 261 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLT 318 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD +VL+R +A G YP VDPL S SR D +E ++ ++ Sbjct: 319 DPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSNSRQVDPNVVGEEHYNTTRAVQQVL 378 Query: 381 HRFEETRDIRLIGG 394 R++E RDI I G Sbjct: 379 QRYKELRDIIAILG 392 >gi|71276027|ref|ZP_00652308.1| ATP synthase F1, beta subunit [Xylella fastidiosa Dixon] gi|71899448|ref|ZP_00681606.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1] gi|170729691|ref|YP_001775124.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa M12] gi|226740694|sp|B0U598|ATPB_XYLFM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71163110|gb|EAO12831.1| ATP synthase F1, beta subunit [Xylella fastidiosa Dixon] gi|71730761|gb|EAO32834.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1] gi|167964484|gb|ACA11494.1| Sodium-transporting two-sector ATPase [Xylella fastidiosa M12] Length = 466 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID + D EI P ++ + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDEAGPITYTD-QWEIHRNAPSYEDQASTTELLETGIKVIDLMCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +TIAEYF S KG +VLL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTIAEYFRDEKDSSGKGKDVLLFIDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + G+IT++ +V V D+ DP + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTANGSITSIQAVYVPADDLTDPSPATTFG 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD + L+RS+A G YP VDPL S SR D +E + + ++++ +DI Sbjct: 319 HLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTTQRVQQTLQKYKDLKDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|242054033|ref|XP_002456162.1| hypothetical protein SORBIDRAFT_03g031470 [Sorghum bicolor] gi|241928137|gb|EES01282.1| hypothetical protein SORBIDRAFT_03g031470 [Sorghum bicolor] Length = 546 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+PID +GD++ + I + P + + ++ TGI+V+D+ Sbjct: 162 ATLGRIINVIGEPIDE-----RGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 216 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 217 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 275 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 276 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 335 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 336 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 393 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 394 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 453 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 454 QNYKNLQDIIAILG 467 >gi|73968434|ref|XP_857891.1| PREDICTED: similar to ATP synthase beta chain, mitochondrial precursor isoform 3 [Canis familiaris] Length = 527 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + L I ++ P + ++ TGI+V+D+ P G Sbjct: 140 LGRIMNVIGEPIDERGPIKTKQL-WAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKG 198 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 199 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 257 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 258 KDATSKVTLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 317 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 318 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 375 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 376 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 435 Query: 389 IRLIGG 394 I I G Sbjct: 436 IIAILG 441 >gi|19114063|ref|NP_593151.1| F1-ATPase beta subunit Atp2 [Schizosaccharomyces pombe 972h-] gi|114565|sp|P22068|ATPB_SCHPO RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|6433997|emb|CAB60704.1| F1-ATPase beta subunit Atp2 [Schizosaccharomyces pombe] Length = 525 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 161/305 (52%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + S I + P + + +TGI+V+D+ P G Sbjct: 138 LGRIMNVIGEPVDERGPIKAVKYS-PIHADAPSFEEQSTTPEILETGIKVVDLLAPYARG 196 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL--G 211 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 197 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYREMQETGVIKL 255 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 256 EGESKAALVFGQMNEPPGARARVALTGLTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEVS 315 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 316 ALLGRIPSAVGYQPTLATDMGAMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 373 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+RS++E G YP VDPL S SR+ D +E L S+ ++ ++ +DI Sbjct: 374 HLDATTVLSRSISELGIYPAVDPLDSKSRMMDPRILGEEHYNLAGSVQQMLQEYKSLQDI 433 Query: 390 RLIGG 394 I G Sbjct: 434 IAILG 438 >gi|326443465|ref|ZP_08218199.1| F0F1 ATP synthase subunit beta [Streptomyces clavuligerus ATCC 27064] Length = 473 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 176/327 (53%), Gaps = 15/327 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ ++ + I K P + + F+TG++V+D+ TP G Sbjct: 94 GKVFNTLGEVLNHPEANKEKTERWAIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 153 Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ M R ++ + V + + VGER RE + I++ L+K+ Sbjct: 154 KIGLFGGAGVGKTVLIQEMIMRVANLHEGVSVFAGVGERTREGNDLIDEMEESGVLEKTA 213 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 214 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 273 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 274 SAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATTV 331 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R ++E+G YP VDPL S SR+ D + +AD + + ++ ++++ +DI I Sbjct: 332 LSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYEAAMRVKGILQKYKDLQDIIAI---- 387 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 388 LGIDELGEEDKLVVHRARRVERFLSQN 414 >gi|222632492|gb|EEE64624.1| hypothetical protein OsJ_19476 [Oryza sativa Japonica Group] Length = 514 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 163/313 (52%), Gaps = 25/313 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+PID KGD++ + I + P + + ++ TGI+V+D+ Sbjct: 122 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 176 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + + + VGER RE RE IE Sbjct: 177 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIES 236 Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF Sbjct: 237 GVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 296 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ D Sbjct: 297 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 354 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381 P + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 355 PAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQ 414 Query: 382 RFEETRDIRLIGG 394 ++ +DI I G Sbjct: 415 NYKNLQDIIAILG 427 >gi|23503637|dbj|BAC20415.1| ATP synthase beta-subunit [Rusalka fusiformis] Length = 376 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 161/307 (52%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + G+ ++ I + P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNLGPVKTGE-TLPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 150 NLTESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 210 SALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEETR 387 + LD VL+R+LA +G YP VDPL S S + + W EK ++ T + R++E + Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYATAQTVKKTLQRYKELQ 326 Query: 388 DIRLIGG 394 DI I G Sbjct: 327 DIIAILG 333 >gi|294624654|ref|ZP_06703325.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601048|gb|EFF45114.1| ATP synthase subunit B [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 468 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF S KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDASGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|254387510|ref|ZP_05002749.1| ATP synthase subunit beta [Streptomyces clavuligerus ATCC 27064] gi|294815103|ref|ZP_06773746.1| ATP synthase subunit beta [Streptomyces clavuligerus ATCC 27064] gi|197701236|gb|EDY47048.1| ATP synthase subunit beta [Streptomyces clavuligerus ATCC 27064] gi|294327702|gb|EFG09345.1| ATP synthase subunit beta [Streptomyces clavuligerus ATCC 27064] Length = 481 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 176/327 (53%), Gaps = 15/327 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ ++ + I K P + + F+TG++V+D+ TP G Sbjct: 102 GKVFNTLGEVLNHPEANKEKTERWAIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 161 Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ M R ++ + V + + VGER RE + I++ L+K+ Sbjct: 162 KIGLFGGAGVGKTVLIQEMIMRVANLHEGVSVFAGVGERTREGNDLIDEMEESGVLEKTA 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 222 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 282 SAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATTV 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R ++E+G YP VDPL S SR+ D + +AD + + ++ ++++ +DI I Sbjct: 340 LSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYEAAMRVKGILQKYKDLQDIIAI---- 395 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 396 LGIDELGEEDKLVVHRARRVERFLSQN 422 >gi|225159358|ref|ZP_03725655.1| ATP synthase F1, beta subunit [Opitutaceae bacterium TAV2] gi|224802064|gb|EEG20339.1| ATP synthase F1, beta subunit [Opitutaceae bacterium TAV2] Length = 476 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/307 (33%), Positives = 158/307 (51%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G P+D + K D I P + + +TGI+V+D+ P G Sbjct: 88 LGRIFNVTGDPVDNKGPV-KFDKKYPIHRPAPSIAEQDTKAEILETGIKVLDLICPFTKG 146 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL------G 211 + G+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 147 GKAGIFGGAGVGKTVVILELINNIAKAHGGYSVFAG-VGERSREGNDLYHEMSEAGVINQ 205 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 D+L KS V V +E P R L+A+ + EYF K +VLL +D+I RF+ + E Sbjct: 206 DDLSKSKVALVYGQMNEPPGARMRVALSALAMTEYFRDEKNQDVLLFIDNIFRFSQAGSE 265 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + Sbjct: 266 VSALLGRSPSAVGYQPTLANEMGILQERI--TSTKKGSITSVQAVYVPADDLTDPAPANT 323 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD IVL RS+AE G YP VDPLAS S+ D A +E V+ + ++ R+++ + Sbjct: 324 FAHLDSTIVLERSIAELGIYPAVDPLASTSKALDPAIVGEEHYTVAREVQRVLQRYKDLQ 383 Query: 388 DIRLIGG 394 DI I G Sbjct: 384 DIIAILG 390 >gi|109900593|ref|YP_663848.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas atlantica T6c] gi|123063994|sp|Q15MU4|ATPB2_PSEA6 RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|109702874|gb|ABG42794.1| ATP synthase F1, beta subunit [Pseudoalteromonas atlantica T6c] Length = 461 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 155/300 (51%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ + M I + P ++ + +TGI+VID+ P Sbjct: 84 ATLGRIMDVLGNPIDEAGPIGEEE-RMSIHREAPTYEDQSSSIELLETGIKVIDLVCPFA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 143 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMNESNVLD 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G Sbjct: 203 KVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLAEEMGVLQERIAST--KTGSITSIQAVYVPADDLTDPSPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + ++ R++E +DI I G Sbjct: 321 VVLSRDIASLGIYPAVDPLDSTSRQLDPLVIGQEHYDTARGVQSVLQRYKELKDIIAILG 380 >gi|86130858|ref|ZP_01049457.1| ATP synthase F1, beta subunit [Dokdonia donghaensis MED134] gi|85818269|gb|EAQ39429.1| ATP synthase F1, beta subunit [Dokdonia donghaensis MED134] Length = 502 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 162/330 (49%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG D L K GD + I P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGMDDLPKTGDAGLPIHRSAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 210 DDFMHSMEEGGWDLSKVDKTAMRDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 387 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E + ++ L+ R++E +DI I G Sbjct: 388 LGNEHYECAQNVKELLQRYKELQDIIAILG 417 >gi|238023073|ref|ZP_04603499.1| hypothetical protein GCWU000324_02997 [Kingella oralis ATCC 51147] gi|237865456|gb|EEP66596.1| hypothetical protein GCWU000324_02997 [Kingella oralis ATCC 51147] Length = 465 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 20/309 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTP 157 GR+++ LGKP+D G D S + ++ P + + +TGI+VID+ P Sbjct: 81 ATLGRIVDVLGKPVD---EAGAIDASHTRAIHQIAPKFDELSSATELLETGIKVIDLLCP 137 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 138 FAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKESN 196 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSI 266 L K +V +E P R LT +T+AEYF + KG +VL +D+I R+ + Sbjct: 197 VLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDETGKGRDVLFFVDNIYRYTLAG 256 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP Sbjct: 257 TEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPA 314 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + + LD +VL+R +A G YP VDPL S SR D E V+ + + +++E Sbjct: 315 TTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQATLQKYKE 374 Query: 386 TRDIRLIGG 394 RDI I G Sbjct: 375 LRDIIAILG 383 >gi|49476187|ref|YP_034228.1| F0F1 ATP synthase subunit beta [Bartonella henselae str. Houston-1] gi|81827679|sp|Q6G1W9|ATPB_BARHE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|49238995|emb|CAF28295.1| ATP synthase beta chain [Bartonella henselae str. Houston-1] Length = 531 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 23/330 (6%) Query: 84 GDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G VF G + + GR++N +G+P+D + + I + P + + Sbjct: 119 GQKVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSK-TRSIHQEAPEYVEQSTAS 177 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGER 198 + TGI+V+D+ P G ++G+F G+G+GK+ L+ + A++ V VGER Sbjct: 178 EILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGER 236 Query: 199 GRE----VREFIEDYLGDNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 RE E IE + N K K +V +E P R L+ +TIAE F Sbjct: 237 TREGNDLYYEMIESRVNVNPKDNNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESF 296 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +++ L ERI + G Sbjct: 297 RDEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTRTG 354 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V ++ V D+ DP + + LD VL+RS+AE+G YP VDPL S SR+ D Sbjct: 355 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLI 414 Query: 366 SADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +E V+ + ++ R+ +DI I G Sbjct: 415 VGEEHYTVACQVQTILQRYRSLQDIIAILG 444 >gi|306991567|pdb|2XND|D Chain D, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp Synthase gi|306991568|pdb|2XND|E Chain E, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp Synthase gi|306991569|pdb|2XND|F Chain F, Crystal Structure Of Bovine F1-C8 Sub-Complex Of Atp Synthase Length = 467 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 74 IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 132 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 133 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 191 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 192 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 251 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 252 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 309 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 310 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 369 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 370 LQDYKSLQDIIAILG 384 >gi|183206540|gb|ACC54468.1| ATP synthase beta subunit [Azorina vidalii] Length = 476 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 113/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + E + G V G + GR Sbjct: 38 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGTPLSVPVGGATLGR 97 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 98 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 154 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 155 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMXDSGVINEQ 213 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 214 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 273 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 274 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 331 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE K S+ + R++E +D Sbjct: 332 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPXIVSDEHYKTAQSVKQTLQRYKELQD 391 Query: 389 IRLIGG 394 I I G Sbjct: 392 IITILG 397 >gi|115439241|ref|NP_001043900.1| Os01g0685800 [Oryza sativa Japonica Group] gi|113533431|dbj|BAF05814.1| Os01g0685800 [Oryza sativa Japonica Group] Length = 557 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+PID KGD++ + I + P + + ++ TGI+V+D+ Sbjct: 165 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 219 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 220 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 278 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 279 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 338 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 339 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 396 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 397 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 456 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 457 QNYKNLQDIIAILG 470 >gi|38906095|gb|AAR27800.1| ATP synthase beta chain [Bifidobacterium bifidum DSM 20456] Length = 373 Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 149/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGH--S 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A G YP VDPL+S SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLSSSSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326 >gi|34499998|gb|AAQ73581.1| ATP synthase beta subunit [Mannheimia sp. P373] Length = 444 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 157/299 (52%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCH 160 GR++N LG+PID +G+ + + + P+ Q F +TGI+VID+ P Sbjct: 82 LGRIMNVLGEPIDEAGPIGEEE--RWTIHRAAPSYEEQANSTEFLETGIKVIDLVPPFAK 139 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 140 GGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDK 199 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G + Sbjct: 200 VSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRM 259 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY + E+ L ERI + + G+IT+V +V V D+ +P + + LD + Sbjct: 260 PSAVGYQPTFAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTEPSPATTFAHLDSTV 317 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R++A G YP VDPL S SR D +E V+ + + R++E +DI I G Sbjct: 318 VLSRNIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILG 376 >gi|288941075|ref|YP_003443315.1| H(+)-transporting two-sector ATPase [Allochromatium vinosum DSM 180] gi|288896447|gb|ADC62283.1| H(+)-transporting two-sector ATPase [Allochromatium vinosum DSM 180] Length = 459 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 112/354 (31%), Positives = 175/354 (49%), Gaps = 24/354 (6%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-----SACWCGRVINALGKPID 114 GQVIR D V I E++ DL W RF P S GR + LG P D Sbjct: 43 GQVIRAADDEVLILVFEGTEDL---DLENTWVRFLDEPIEIALSPEILGREFDGLGVPRD 99 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 G + S + PA R + +TGI ID L GQ++ +F+GSG+ Sbjct: 100 GRPPVLSSLRRAVGGSAINPAA-RTYPREFIQTGISTIDGLNSLVRGQKLPIFSGSGLPH 158 Query: 175 STLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV-VATSDE 226 + L + R S F ++ + +G + + F +++ + ++VV+ V +D+ Sbjct: 159 NRLAAQIVRQAKLVDESSSF-SIVFAAMGVSYADAKFFRDEFANSGVLRNVVMFVNLADD 217 Query: 227 SPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 P+ R P TA+T AEY + D +VL++L +T +A ++RE+AT G++P +GYP Sbjct: 218 PPVERLTLPRTALTAAEYLAYDLDRHVLVVLTDMTNYAEALREVATAKGDVPARKGYPGY 277 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 ++S+L L ER G + G+IT + V + D+ PI D I +G IVL+R L + Sbjct: 278 LYSDLAELYERCGRIHERHGSITMMPVVSMPSDDITHPIPDLTGYITEGQIVLSRELHNQ 337 Query: 346 GRYPPVDPLASVSRLADKAWSADEK-----KLVSSLTHLIHRFEETRDIRLIGG 394 G YPPV+ S+SRL D+ ++ + L L R +ETR++ I G Sbjct: 338 GIYPPVNISPSLSRLMKDGIGKDDTREDHPRVAAQLYALYARAQETRNLASIIG 391 >gi|308800050|ref|XP_003074806.1| AtpB ATP synthase beta chain, mitochondrial precursor (IC) [Ostreococcus tauri] gi|119358798|emb|CAL52064.2| AtpB ATP synthase beta chain, mitochondrial precursor (IC) [Ostreococcus tauri] Length = 530 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 158/310 (50%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + S+ I + PP +++ + TGI+V+D+ P Sbjct: 139 ATLGRIMNVIGEPIDECGPIST-TTSLAIHREAPPFVDQSTEMQMLVTGIKVVDLLAPYQ 197 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L++ A+ V VGER RE E IE Sbjct: 198 KGGKIGLFGGAGVGKTVFIMELINNIAKGHGGFSVFAG-VGERTREGNDLYHEMIEGGVI 256 Query: 209 YLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 LGD K +V +E P R LT +T+AEYF +G +VL +D+I RF + Sbjct: 257 KLGDQASDSKCTLVYGQMNEPPGARARVGLTGLTVAEYFRDFEGQDVLFFVDNIFRFTQA 316 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++L L ERI + KG+IT+V ++ V D+ DP Sbjct: 317 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAIYVPADDLTDPAP 374 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+RS+AE G YP VDPL S SR+ DE + ++ ++ Sbjct: 375 ATTFAHLDATTVLSRSIAEIGIYPAVDPLDSTSRMLSPLALGDEHYNTARGVQKILQDYK 434 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 435 NLQDIIAILG 444 >gi|227485042|ref|ZP_03915358.1| V family two sector ATPase, V(1) subunit B [Anaerococcus lactolyticus ATCC 51172] gi|227236875|gb|EEI86890.1| V family two sector ATPase, V(1) subunit B [Anaerococcus lactolyticus ATCC 51172] Length = 457 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/351 (28%), Positives = 178/351 (50%), Gaps = 17/351 (4%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPID-G 115 +G V+ ++ D V + + S+ D+V F+ + + GR N +G+PID G Sbjct: 40 VGSVVMVDDDTVTVEVYANTDNFSVEDIVVSFYERPLELPLNETILGRTFNGIGEPIDNG 99 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 D +E ++ P A R+ +TGI ID T L GQ++ +F+GSG+ + Sbjct: 100 GDIYADETYPVEGLALNPVA--REYPRDFIQTGISAIDTLTTLIRGQKLPIFSGSGLPHN 157 Query: 176 TLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPIL 230 + + R + + +G + E F + + +K +V+ +SPI+ Sbjct: 158 EIAAQIIRQAKLKTNEDFAFVFAAMGIKKDEAMFFEDAFSKAGVKDKLVMYQNLADSPIM 217 Query: 231 -RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R +AP A+T AEY + KG +VL+I+ +T + ++RE+++ GE+P +GYP ++S Sbjct: 218 ERLLAPKCALTAAEYLAYKKGYHVLVIITDMTSYCEALREVSSIRGEIPSRKGYPGYLYS 277 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 L L ER G E KG++T + + + D+ P+AD I +G IV++R L+ +G Y Sbjct: 278 NLASLYERAGMIEGVKGSVTLIPILTMPNDDITHPVADLTGYITEGQIVIDRGLSSKGVY 337 Query: 349 PPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 PP++ L S+SRL + AD + +++ L + + R+I I G Sbjct: 338 PPINVLPSLSRLMKDGIGEGYTRADHEDVMNQLYESYSKVIDVRNIAQIVG 388 >gi|120405282|ref|YP_955111.1| F0F1 ATP synthase subunit beta [Mycobacterium vanbaalenii PYR-1] gi|190358686|sp|A1TD55|ATPB_MYCVP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|119958100|gb|ABM15105.1| ATP synthase F1, beta subunit [Mycobacterium vanbaalenii PYR-1] Length = 475 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 162/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + GK I K P + + + +TG++V+D+ TP G Sbjct: 96 GHVFNALGDCLD-EPGYGKDFEHWSIHRKPPAFADLEPRTEMLETGLKVVDLLTPYVRGG 154 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK + Sbjct: 155 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLKDTA 214 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AE+F +G +VLL +D+I RF + E++T G +P Sbjct: 215 LVFGQMDEPPGTRMRVALSALTMAEFFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 274 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + +IT++ +V V D++ DP + + LD Sbjct: 275 SAVGYQPTLADEMGELQERITSTRGK--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 332 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++ +G +P VDPLAS S + D A DE ++ + ++ R+++ +DI I G Sbjct: 333 LSRAVFSKGIFPAVDPLASSSTILDPAVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 390 >gi|66773080|ref|NP_001019600.1| mitochondrial ATP synthase beta subunit-like [Danio rerio] gi|66267496|gb|AAH95620.1| Zgc:111961 [Danio rerio] Length = 517 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 121 IRIPVGPETLGRIMNVIGEPIDERGPISTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 179 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 180 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 238 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 239 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 298 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 299 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 356 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 357 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYDVARGVQKI 416 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 417 LQDYKSLQDIIAILG 431 >gi|323140893|ref|ZP_08075806.1| ATP synthase F1, beta subunit [Phascolarctobacterium sp. YIT 12067] gi|322414631|gb|EFY05437.1| ATP synthase F1, beta subunit [Phascolarctobacterium sp. YIT 12067] Length = 448 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 154/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D DD+ + I P + K +TGI+V+D+ P G Sbjct: 69 LGRIFNVLGETVDHDDTPVEAADHWPIHRPAPSFDQQATATKILETGIKVVDLIAPYAMG 128 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ ++ + + + VGER RE + + + K+ Sbjct: 129 GKIGLFGGAGVGKTVIIMELIHNIATAHGGYSVFAGVGERTREGNDLWGEMKESGVINKT 188 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF G +VLL +D+I RF + E++ G + Sbjct: 189 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVGGQDVLLFIDNIFRFIQAGSEVSALLGRM 248 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + + G+IT+V +V V D+ DP + LD Sbjct: 249 PSAVGYQPTLANDIGALQERI--TSTKTGSITSVQAVYVPADDLTDPAPAGTFAHLDATT 306 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D +E V+ + ++ R++E +DI I G Sbjct: 307 VLSRQIAELGIYPAVDPLDSTSRILDPLVIGEEHYHVARGVQAILQRYKELQDIIAILG 365 >gi|126725129|ref|ZP_01740972.1| F0F1 ATP synthase subunit beta [Rhodobacterales bacterium HTCC2150] gi|126706293|gb|EBA05383.1| F0F1 ATP synthase subunit beta [Rhodobacterales bacterium HTCC2150] Length = 474 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 165/325 (50%), Gaps = 20/325 (6%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D+ G+ + GR++N G P+D + K S I P + + Sbjct: 69 DVTDTGGQIMVPVGTATLGRIMNVTGDPVDEKGPV-KTKESRAIHGDAPAFAEQSTETEI 127 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERG 199 TGI+VID+ P G +IG+F G+G+GK+ L+ + KV + + VGER Sbjct: 128 LVTGIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGLSVFAGVGERT 185 Query: 200 RE----VREFIED--YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGD 250 RE E IE + D+L+KS +V +E P R L+ +T+AE F G Sbjct: 186 REGNDLYHEMIESGVIVPDDLEKSKIALVYGQMNEPPGARMRIALSGLTLAEQFRDDSGS 245 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VL +D+I RF + E++ G +P A GY ++ +++ + ERI + + G+IT+V Sbjct: 246 DVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--ASTKSGSITSV 303 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +V V D+ DP + + LD VL+RS++E+G YP VDPL S SRL D +E Sbjct: 304 QAVYVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPLIIGEEH 363 Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394 K+ + + ++ R++ +DI I G Sbjct: 364 YKVATDVQQVLQRYKSLQDIIAILG 388 >gi|120609075|ref|YP_968753.1| F0F1 ATP synthase subunit beta [Acidovorax citrulli AAC00-1] gi|326315260|ref|YP_004232932.1| ATP synthase subunit beta [Acidovorax avenae subsp. avenae ATCC 19860] gi|190358284|sp|A1TJ41|ATPB_ACIAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|120587539|gb|ABM30979.1| ATP synthase F1 subcomplex beta subunit [Acidovorax citrulli AAC00-1] gi|323372096|gb|ADX44365.1| ATP synthase subunit beta [Acidovorax avenae subsp. avenae ATCC 19860] Length = 476 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 159/308 (51%), Gaps = 17/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID + + +L+ I K P ++ +TGI+VID+ P Sbjct: 91 ATLGRIMDVLGSPIDERGPVSQ-ELTASIHRKAPAYDELSPSQELLETGIKVIDLVCPFA 149 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD--- 212 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 150 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSGVV 208 Query: 213 NLKK-----SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 NL+K +V +E P R LT +TIAE F +G +VL +D+I R+ + Sbjct: 209 NLEKLEDSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGT 268 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 269 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 326 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD +VL+R +A G YP VDPL S SR D +E ++ + + R++E Sbjct: 327 TFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYQVARGVQGTLQRYKEL 386 Query: 387 RDIRLIGG 394 RDI I G Sbjct: 387 RDIIAILG 394 >gi|209878622|ref|XP_002140752.1| ATP synthase F1, beta subunit [Cryptosporidium muris RN66] gi|209556358|gb|EEA06403.1| ATP synthase F1, beta subunit, putative [Cryptosporidium muris RN66] Length = 558 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/326 (31%), Positives = 165/326 (50%), Gaps = 36/326 (11%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + + + I K P + TGI+V+D+ P Sbjct: 151 ATLGRIMNVIGEPVDECGPI-ESTIRLPIHRKAPEYTEQGTDPSILITGIKVVDLLAPYA 209 Query: 160 HGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE------------- 201 G +IG+F G+G+GK+ L+ ++ R + + + VGER RE Sbjct: 210 KGGKIGLFGGAGVGKTVLIMELINNVAKRHGGYS--VFAGVGERTREGNDLYHEMLITGV 267 Query: 202 -VREFIE---DYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKG 249 ++FI DY G+ K+ +V +E P R LT +T+AEYF KG Sbjct: 268 NKKKFISMELDYKGNKYTKCDFTGSKTALVYGQMNEPPGARARVALTGLTVAEYFRDEKG 327 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VLL +D+I RF + E++ G +P A GY ++ ++L L ERI + +KG+IT+ Sbjct: 328 QDVLLFIDNIYRFTQAGSEVSALLGRMPSAVGYQPTLATDLGSLQERI--TTTKKGSITS 385 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 V +V V D+ DP + + + LD VL+R +AE G YP VDPL S SR+ D + E Sbjct: 386 VQAVYVPADDLTDPASAATFAHLDATTVLSRKIAEFGIYPAVDPLDSTSRMLDPSIIDYE 445 Query: 370 KKLVS-SLTHLIHRFEETRDIRLIGG 394 V+ + L+ ++ +DI I G Sbjct: 446 HYHVAREVQKLLQDYKSLQDIIAILG 471 >gi|83854832|ref|ZP_00948362.1| ATP synthase subunit B [Sulfitobacter sp. NAS-14.1] gi|83842675|gb|EAP81842.1| ATP synthase subunit B [Sulfitobacter sp. NAS-14.1] Length = 474 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 165/314 (52%), Gaps = 28/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+ ID KGD+ I + P + + +TGI+VID+ Sbjct: 84 ATLGRIMNVVGEAIDE-----KGDIQSAERRSIHADAPEFAEQSTTSEVLETGIKVIDLL 138 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFI 206 P G +IG+F G+G+GK+ L+ + KV + + VGER RE E I Sbjct: 139 APYAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMI 196 Query: 207 EDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261 E + D+L+KS V V +E P R LT +T+AE F + G +VL +D+I R Sbjct: 197 ESNVINPDDLEKSQVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFR 256 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + + G+IT+V +V V D+ Sbjct: 257 FTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKSGSITSVQAVYVPADDLT 314 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP + + LD VL+RS++E+G YP VDPL S SRL D + +E V+ + ++ Sbjct: 315 DPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLMDPSIVGEEHYNVARDVQGIL 374 Query: 381 HRFEETRDIRLIGG 394 R++ +DI I G Sbjct: 375 QRYKSLQDIIAILG 388 >gi|304388486|ref|ZP_07370589.1| ATP synthase F1 sector beta subunit [Neisseria meningitidis ATCC 13091] gi|304337483|gb|EFM03649.1| ATP synthase F1 sector beta subunit [Neisseria meningitidis ATCC 13091] Length = 465 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|91178130|gb|ABE27300.1| mitochondrial F-ATPase beta subunit [Wickerhamomyces anomalus] Length = 337 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 167/311 (53%), Gaps = 28/311 (9%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR+IN +G+PID +G ++ + + + PP+ + Q + +TGI+V+D+ P Sbjct: 19 LGRIINVVGEPIDE-----RGPINTKQRNPIHAEPPSFSEQSTAAEVLETGIKVVDLLAP 73 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE-- 207 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E Sbjct: 74 YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETG 132 Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 + GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF Sbjct: 133 VINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQ 190 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP Sbjct: 191 AGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTQKGSVTSVQAVYVPADDLTDPA 248 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R ++E G YP VDPL S SRL D + E + +++ + + Sbjct: 249 PATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATNVQQTLQAY 308 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 309 KSLQDIIAILG 319 >gi|83941355|ref|ZP_00953817.1| ATP synthase subunit B [Sulfitobacter sp. EE-36] gi|83847175|gb|EAP85050.1| ATP synthase subunit B [Sulfitobacter sp. EE-36] Length = 474 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 104/314 (33%), Positives = 165/314 (52%), Gaps = 28/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+ ID KGD+ I + P + + +TGI+VID+ Sbjct: 84 ATLGRIMNVVGEAIDE-----KGDIQSAERRSIHADAPEFAEQSTTSEVLETGIKVIDLL 138 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFI 206 P G +IG+F G+G+GK+ L+ + KV + + VGER RE E I Sbjct: 139 APYAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMI 196 Query: 207 EDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261 E + D+L+KS V V +E P R LT +T+AE F + G +VL +D+I R Sbjct: 197 ESNVINPDDLEKSQVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFR 256 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + + G+IT+V +V V D+ Sbjct: 257 FTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKSGSITSVQAVYVPADDLT 314 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP + + LD VL+RS++E+G YP VDPL S SRL D + +E V+ + ++ Sbjct: 315 DPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLMDPSIVGEEHYNVARDVQGIL 374 Query: 381 HRFEETRDIRLIGG 394 R++ +DI I G Sbjct: 375 QRYKSLQDIIAILG 388 >gi|121592742|ref|YP_984638.1| F0F1 ATP synthase subunit beta [Acidovorax sp. JS42] gi|190358248|sp|A1W2T7|ATPB_ACISJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|120604822|gb|ABM40562.1| ATP synthase F1 subcomplex beta subunit [Acidovorax sp. JS42] Length = 468 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 107/340 (31%), Positives = 171/340 (50%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G +V + G P GR+++ LG PID + + L+ Sbjct: 51 VVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQ-SLTAS 109 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAP 235 + V VGER RE +F + +NL +S V V +E P R Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVA 228 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT +TIAE F +G +VL +D+I R+ + E++ G +P A GY ++ E+ RL E Sbjct: 229 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 288 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL Sbjct: 289 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLD 346 Query: 356 SVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 S SR D +E ++ + + R++E RDI I G Sbjct: 347 STSRQLDPQVVGEEHYQVARQVQGTLQRYKELRDIIAILG 386 >gi|38906109|gb|AAR27807.1| ATP synthase beta chain [Bifidobacterium animalis subsp. animalis ATCC 25527] Length = 373 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 149/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A G YP VDPL+S SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLSSSSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326 >gi|325135527|gb|EGC58145.1| ATP synthase F1, beta subunit [Neisseria meningitidis M0579] Length = 465 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 84 GRIVDVLGTPVDEAGPIDT-DKSCAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGG 142 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIAT 271 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 202 AMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSA 261 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 262 LLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFAH 319 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 320 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDII 379 Query: 391 LIGG 394 I G Sbjct: 380 AILG 383 >gi|222109523|ref|YP_002551787.1| f0f1 ATP synthase subunit beta [Acidovorax ebreus TPSY] gi|254808148|sp|B9MBA3|ATPB_ACIET RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|221728967|gb|ACM31787.1| ATP synthase F1, beta subunit [Acidovorax ebreus TPSY] Length = 468 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 107/340 (31%), Positives = 171/340 (50%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G +V + G P GR+++ LG PID + + L+ Sbjct: 51 VVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQ-SLTAS 109 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAP 235 + V VGER RE +F + +NL +S V V +E P R Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMADSGVVNLENLGESKVAMVYGQMNEPPGNRLRVA 228 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT +TIAE F +G +VL +D+I R+ + E++ G +P A GY ++ E+ RL E Sbjct: 229 LTGLTIAESFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 288 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL Sbjct: 289 RI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAALGIYPAVDPLD 346 Query: 356 SVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 S SR D +E ++ + + R++E RDI I G Sbjct: 347 STSRQLDPQVVGEEHYQVARQVQGTLQRYKELRDIIAILG 386 >gi|3660251|pdb|1NBM|D Chain D, The Structure Of Bovine F1-Atpase Covalently Inhibited With 4-Chloro-7-Nitrobenzofurazan gi|3660253|pdb|1NBM|F Chain F, The Structure Of Bovine F1-Atpase Covalently Inhibited With 4-Chloro-7-Nitrobenzofurazan Length = 480 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 86 IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 144 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 145 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 203 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 204 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 263 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 264 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 321 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 322 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 381 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 382 LQDYKSLQDIIAILG 396 >gi|241758951|ref|ZP_04757063.1| ATP synthase F1, beta subunit [Neisseria flavescens SK114] gi|241320772|gb|EER57005.1| ATP synthase F1, beta subunit [Neisseria flavescens SK114] Length = 465 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|227495029|ref|ZP_03925345.1| H(+)-transporting two-sector ATPase [Actinomyces coleocanis DSM 15436] gi|226831481|gb|EEH63864.1| H(+)-transporting two-sector ATPase [Actinomyces coleocanis DSM 15436] Length = 480 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 150/273 (54%), Gaps = 9/273 (3%) Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PP ++ + K F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 126 IHRQPPHFDQLESKTKMFETGIKVIDLLTPYVLGGKIGLFGGAGVGKTVLIQEMIQRVAQ 185 Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D +S+ VGER RE + I E K+ +V DE P R LT +T+AE Sbjct: 186 DHGGVSVFAGVGERTREGNDLIVEMEEAGVFDKTALVFGQMDEPPGTRLRIALTGLTMAE 245 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ +L ERI + Sbjct: 246 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSA 303 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A G YP VDPLAS SR+ D Sbjct: 304 GGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAVDPLASTSRILD 363 Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 + +E V++ + ++ + +E +DI I G Sbjct: 364 PTYVGEEHYAVATRVKSILQKNKELQDIIAILG 396 >gi|261379445|ref|ZP_05984018.1| ATP synthase F1, beta subunit [Neisseria subflava NJ9703] gi|319638951|ref|ZP_07993709.1| ATP synthase subunit beta [Neisseria mucosa C102] gi|284797899|gb|EFC53246.1| ATP synthase F1, beta subunit [Neisseria subflava NJ9703] gi|317399855|gb|EFV80518.1| ATP synthase subunit beta [Neisseria mucosa C102] Length = 465 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|225075914|ref|ZP_03719113.1| hypothetical protein NEIFLAOT_00938 [Neisseria flavescens NRL30031/H210] gi|224952770|gb|EEG33979.1| hypothetical protein NEIFLAOT_00938 [Neisseria flavescens NRL30031/H210] Length = 465 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|46909231|gb|AAT06133.1| ATP synthase beta subunit [Antedon mediterranea] Length = 427 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/284 (34%), Positives = 151/284 (53%), Gaps = 24/284 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+IN +G+PID +G + E I ++ P + ++ +TGI+V+D+ P Sbjct: 64 LGRIINVIGEPIDE-----RGPIPTERRAAIHAEAPEFIEMNVEQEILETGIKVVDLLAP 118 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 119 YAKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIEGG 177 Query: 210 LGD---NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + D N K +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 178 VIDLKGNKSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 237 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP Sbjct: 238 GSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAP 295 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + + LD VL+R +AE G YP VDPL S SR+ D DE Sbjct: 296 ATTFAHLDATTVLSRGIAELGIYPAVDPLDSSSRIMDPFIVGDE 339 >gi|288554385|ref|YP_003426320.1| F0F1 ATP synthase subunit beta [Bacillus pseudofirmus OF4] gi|14916961|sp|P22478|ATPB_BACPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|12061046|gb|AAG48363.1|AF330160_10 ATP synthase beta subunit [Bacillus pseudofirmus OF4] gi|288545545|gb|ADC49428.1| ATP synthase beta subunit [Bacillus pseudofirmus OF4] Length = 470 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/330 (30%), Positives = 169/330 (51%), Gaps = 15/330 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID + + I + P + +TGI+V+D+ P Sbjct: 90 ATLGRVFNVLGEAIDLGEPVAADVKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYI 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + +K Sbjct: 150 KGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYHEMTDSGVIK 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R L+ +T+AE+F + G +VLL +D+I RF + E++ G Sbjct: 210 KTAMVFGQMNEPPGARMRVALSGLTMAEHFRDRDGQDVLLFVDNIFRFTQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + + G++T++ ++ V D++ DP + + LD Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR L+ + + + + + +++E +DI I Sbjct: 328 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAI- 386 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ I FL Q+ Sbjct: 387 ---LGMDELSEEDKLVVHRARRIQFFLSQN 413 >gi|120600835|ref|YP_965409.1| F0F1 ATP synthase subunit beta [Shewanella sp. W3-18-1] gi|146295036|ref|YP_001185460.1| F0F1 ATP synthase subunit beta [Shewanella putrefaciens CN-32] gi|166222415|sp|A4YCH8|ATPB_SHEPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166222417|sp|A1RQB0|ATPB_SHESW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|120560928|gb|ABM26855.1| ATP synthase F1, beta subunit [Shewanella sp. W3-18-1] gi|145566726|gb|ABP77661.1| ATP synthase F1, beta subunit [Shewanella putrefaciens CN-32] gi|319428554|gb|ADV56628.1| ATP synthase F1, beta subunit [Shewanella putrefaciens 200] Length = 463 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + + I P ++ + +TGI+VID+ P Sbjct: 85 ATLGRIMNVLGEPIDEAGPIGEEERYV-IHRAAPSYEDQSNTTELLETGIKVIDLVCPFA 143 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + L Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R L+ +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380 Query: 394 G 394 G Sbjct: 381 G 381 >gi|330721486|gb|EGG99532.1| ATP synthase beta chain [gamma proteobacterium IMCC2047] Length = 464 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 159/304 (52%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG PID +G+ + M I K P E+ +TGI+VID+ P G Sbjct: 84 GRIMDVLGNPIDECGEIGEQE-RMPIHRKAPTYEELAASEELLETGIKVIDLVCPFAKGG 142 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DN 213 ++G+F G+G+GK+ + + + +S+ VGER RE +F + +N Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEN 202 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K+S V V +E P R LT +T+AE F G +VLL +D+I R+ + E++ Sbjct: 203 FKESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDDGKDVLLFVDNIYRYTLAGTEVSA 262 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAH 320 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A +G YP VDPL S SR D E ++ + ++ R++E +DI Sbjct: 321 LDSTVVLSRDIASKGIYPAVDPLDSTSRQLDPLIIGTEHYEVARGVQGVLQRYKELKDII 380 Query: 391 LIGG 394 I G Sbjct: 381 AILG 384 >gi|159155102|gb|AAI54660.1| Zgc:111961 [Danio rerio] Length = 517 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 121 IRIPVGPETLGRIMNVIGEPIDERGPISTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 179 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 180 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 238 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 239 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 298 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 299 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 356 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 357 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYDVARGVQKI 416 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 417 LQDYKSLQDIIAILG 431 >gi|226487052|emb|CAX75391.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Schistosoma japonicum] Length = 517 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 158/289 (54%), Gaps = 26/289 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N +G+PID +G + ++MS + P ++ ++ +TGI+V+D+ P Sbjct: 131 GRIMNVIGEPIDE-----RGPIKTKMMSGIHQDAPNFIDMSTEQEILETGIKVVDLLAPY 185 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------I 206 G +IG+F G+G+GK+ L+ + AR+ V VGER RE + + Sbjct: 186 VKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREGNDLYHEMITTGV 244 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 D G+N K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 245 IDLKGNNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFVDNIFRFTQA 303 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP Sbjct: 304 GSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTKKGSITSVQAIYVPADDLTDPAP 361 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 + + LD VL+R++AE G YP VDPL S SR+ D +E V+ Sbjct: 362 ATTFAHLDATTVLSRAIAELGIYPAVDPLDSNSRILDPNIVGEEHYSVA 410 >gi|119509845|ref|ZP_01628988.1| ATP synthase subunit B [Nodularia spumigena CCY9414] gi|119465454|gb|EAW46348.1| ATP synthase subunit B [Nodularia spumigena CCY9414] Length = 482 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + ++ I P + + F+TGI+V+D+ TP Sbjct: 95 VTLGRIFNVLGEPVDNQGPV-NAEQTLPIHRPSPKFTDLETKPSVFETGIKVVDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL------ 210 G +IG+F G+G+GK+ ++ + +S+ VGER RE + + + Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMMESGVIN 213 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSI 266 DNL +S +V +E P R L+ +T+AEYF SK D VLL +D+I RF + Sbjct: 214 KDNLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVSKQD-VLLFVDNIFRFVQAG 272 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP Sbjct: 273 SEVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPA 330 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LDG VL+R LA +G YP VDPL S S + D+ ++ + R++E Sbjct: 331 TTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQPEIVGDDHYSTARAVQSTLQRYKE 390 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 391 LQDIIAILG 399 >gi|34500010|gb|AAQ73587.1| ATP synthase beta subunit [Haemophilus parasuis] Length = 444 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 155/298 (52%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P ++ + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDEAGPIGEEE-RWTIHRAAPSYEDQANSTELLETGIKVIDLIAPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V S L D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVPSGLRSADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E V+ + + R++E +DI I G Sbjct: 319 LSRNIASLGIYPAIDPLNSTSRQLDPLVVVQEHYDVARGVQKTLQRYKELKDIIAILG 376 >gi|56707243|ref|YP_169139.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. tularensis SCHU S4] gi|110669713|ref|YP_666270.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. tularensis FSC198] gi|134301278|ref|YP_001121246.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. tularensis WY96-3418] gi|254369928|ref|ZP_04985936.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254375017|ref|ZP_04990497.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|81820830|sp|Q5NIK3|ATPB_FRATT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|123169682|sp|Q14K06|ATPB_FRAT1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166201706|sp|A4IW24|ATPB_FRATW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|56603735|emb|CAG44697.1| ATP synthase beta chain [Francisella tularensis subsp. tularensis SCHU S4] gi|110320046|emb|CAL08080.1| ATP synthase beta chain [Francisella tularensis subsp. tularensis FSC198] gi|134049055|gb|ABO46126.1| ATP synthase F1, beta subunit [Francisella tularensis subsp. tularensis WY96-3418] gi|151568174|gb|EDN33828.1| hypothetical protein FTBG_01520 [Francisella tularensis subsp. tularensis FSC033] gi|151572735|gb|EDN38389.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|282158352|gb|ADA77743.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. tularensis NE061598] gi|332184761|gb|AEE27015.1| ATP synthase beta chain [Francisella cf. novicida 3523] Length = 458 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 12/300 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N LG+PID + + + + PPA + + +TGI+V+D+ P Sbjct: 83 LGRIMNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAK 140 Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L Sbjct: 141 GGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R L+ +TIAE F + +VL+ +D+I R+ + E++ G Sbjct: 200 KVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 260 MPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 IVL+R +AE G YP VDPL S SR D D + ++ ++ R++E +DI I G Sbjct: 318 IVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKDIIAILG 377 >gi|225849748|ref|YP_002729982.1| F0F1 ATP synthase subunit beta [Persephonella marina EX-H1] gi|225646062|gb|ACO04248.1| ATP synthase F1, beta subunit [Persephonella marina EX-H1] Length = 477 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 162/311 (52%), Gaps = 11/311 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G +I GR+ N +G+PID D + + I P + + F+TGI+ Sbjct: 85 GPLQIPVGKPVLGRIFNVVGQPID-DGGPVEAEEKWPIFRPAPSFEEQSTKVEIFETGIK 143 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-F 205 VID+ P G ++G+F G+G+GK+ L+ A+ V++ VGER RE + + Sbjct: 144 VIDLLVPFIKGGKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLW 202 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +E L + +V +E P +R T +T+AEYF + +VL+ +D+I RF Sbjct: 203 MEMKESGVLPYTAMVYGQMNEPPGVRFRVAQTGLTMAEYFRDVEKQDVLIFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++T G LP A GY ++ +++ + ERI + G+IT++ +V V D+ DP Sbjct: 263 AGAEVSTLLGRLPSAVGYQPTLGTDVGEVQERI--TSTVNGSITSIQAVYVPADDITDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383 SV + LD IVL R LAE G YP +DPL S S+ + +E V+ + ++ R+ Sbjct: 321 PASVFAHLDATIVLQRRLAELGIYPAIDPLESTSKALAPEYVGEEHYFVAREVQRILQRY 380 Query: 384 EETRDIRLIGG 394 +E ++I I G Sbjct: 381 KELQEIIAILG 391 >gi|46909265|gb|AAT06150.1| ATP synthase beta subunit [Strongylocentrotus purpuratus] Length = 427 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/272 (34%), Positives = 148/272 (54%), Gaps = 16/272 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID +G D I ++ P + ++ TGI+V+D+ P G Sbjct: 65 GRIINVIGEPIDERGPIGT-DKRSAIHAEAPAFVEMSVNQEILVTGIKVVDLLAPYAKGG 123 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 124 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTRESNDLYHEMIEGGVISLK 182 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 183 DDTSKVALVYGQMNEPPGARARVALTGLTVAEYFCDQEGQDVLLFIDNIFRFTQAGSEVS 242 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 243 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 300 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 LD VL+R +AE G +P VDPL S SR+ D Sbjct: 301 HLDATTVLSRGIAELGIHPAVDPLDSSSRIMD 332 >gi|239982327|ref|ZP_04704851.1| F0F1 ATP synthase subunit beta [Streptomyces albus J1074] gi|291454172|ref|ZP_06593562.1| ATP synthase subunit B [Streptomyces albus J1074] gi|291357121|gb|EFE84023.1| ATP synthase subunit B [Streptomyces albus J1074] Length = 480 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 159/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ + I K P + + F+TGI+VID+ TP G Sbjct: 101 GKVFNTLGEVLNKPEENANIGERWAIHRKAPGFDQLESKTEMFETGIKVIDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + IE+ + K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEEMAESGVIDKTA 220 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 221 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 280 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 281 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++E+G YP VDPL S SR+ D + A D + + ++ ++++ +DI I G Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYIAKDHYEAAMRVKGILQKYKDLQDIIAILG 396 >gi|121635590|ref|YP_975835.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis FAM18] gi|161869279|ref|YP_001598446.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis 053442] gi|166201721|sp|A1KW11|ATPB_NEIMF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081336|sp|A9M123|ATPB_NEIM0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|120867296|emb|CAM11067.1| ATP synthase beta chain [Neisseria meningitidis FAM18] gi|161594832|gb|ABX72492.1| ATP synthase beta chain [Neisseria meningitidis 053442] gi|254670875|emb|CBA07378.1| ATP synthase beta chain [Neisseria meningitidis alpha153] gi|254672595|emb|CBA06293.1| ATP synthase beta chain [Neisseria meningitidis alpha275] gi|261393264|emb|CAX50890.1| ATP synthase beta chain [Neisseria meningitidis 8013] gi|319409757|emb|CBY90063.1| ATP synthase beta chain [Neisseria meningitidis WUE 2594] gi|325127449|gb|EGC50379.1| ATP synthase F1, beta subunit [Neisseria meningitidis N1568] gi|325131657|gb|EGC54363.1| ATP synthase F1, beta subunit [Neisseria meningitidis M6190] gi|325133395|gb|EGC56059.1| ATP synthase F1, beta subunit [Neisseria meningitidis M13399] gi|325137520|gb|EGC60103.1| ATP synthase F1, beta subunit [Neisseria meningitidis ES14902] gi|325141528|gb|EGC63998.1| ATP synthase F1, beta subunit [Neisseria meningitidis 961-5945] gi|325143645|gb|EGC65964.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240013] gi|325199025|gb|ADY94481.1| ATP synthase F1, beta subunit [Neisseria meningitidis G2136] gi|325204886|gb|ADZ00340.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240355] gi|325206841|gb|ADZ02294.1| ATP synthase F1, beta subunit [Neisseria meningitidis M04-240196] Length = 465 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|91178134|gb|ABE27302.1| mitochondrial F-ATPase beta subunit [Kluyveromyces lactis] Length = 337 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I + P + + + +TGI+V+D+ P G Sbjct: 19 LGRIINVIGEPIDERGPI-NSKMRKPIHADPPLFVEQSTAAEVLETGIKVVDLLAPYARG 77 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 78 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 136 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 137 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 194 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 195 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 252 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D A E + + + + ++ + Sbjct: 253 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATQVQQTLQAYKSLQ 312 Query: 388 DIRLIGG 394 DI I G Sbjct: 313 DIIAILG 319 >gi|46909239|gb|AAT06137.1| ATP synthase beta subunit [Dendraster excentricus] Length = 427 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + D I ++ P + ++ TGI+V+D+ P G Sbjct: 64 LGRIMNVIGEPIDERGPI-PTDKRAAIHAEAPEFVEMSVAQEILVTGIKVVDLLAPYAKG 122 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISL 181 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 182 KDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 241 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 242 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 299 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D + K+ S+ ++ + +D Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNIVGERHYKVARSVQKILQDNKTLQD 359 Query: 389 IRLIGG 394 I I G Sbjct: 360 IIAILG 365 >gi|38710239|gb|AAR27324.1| AtpD [Bifidobacterium animalis] Length = 377 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 94/269 (34%), Positives = 149/269 (55%), Gaps = 10/269 (3%) Query: 133 PPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVI 191 PPA ++ + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + Sbjct: 60 PPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGG 119 Query: 192 ISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 +S+ VGER RE + I E L+K+ +V DE P R PLTA+T+AEYF Sbjct: 120 VSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQPGTRLRVPLTALTMAEYFRD 179 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + + Sbjct: 180 VQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TSTRGHS 237 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ ++ V D++ DP + + LD L+R +A G YP VDPL+S SR+ D + Sbjct: 238 ITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASRGIYPAVDPLSSSSRILDPRYV 297 Query: 367 ADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + ++ R +E +D I LIG Sbjct: 298 GQAHYDCANRVKAILQRNKELQDIIALIG 326 >gi|1827812|pdb|1COW|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B gi|1827813|pdb|1COW|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B gi|1827814|pdb|1COW|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B gi|1942371|pdb|1EFR|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With The Peptide Antibiotic Efrapeptin gi|1942372|pdb|1EFR|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With The Peptide Antibiotic Efrapeptin gi|1942373|pdb|1EFR|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With The Peptide Antibiotic Efrapeptin gi|1943083|pdb|1BMF|D Chain D, Bovine Mitochondrial F1-Atpase gi|1943084|pdb|1BMF|E Chain E, Bovine Mitochondrial F1-Atpase gi|1943085|pdb|1BMF|F Chain F, Bovine Mitochondrial F1-Atpase gi|6573683|pdb|1QO1|D Chain D, Molecular Architecture Of The Rotary Motor In Atp Synthase From Yeast Mitochondria gi|6573684|pdb|1QO1|E Chain E, Molecular Architecture Of The Rotary Motor In Atp Synthase From Yeast Mitochondria gi|6573685|pdb|1QO1|F Chain F, Molecular Architecture Of The Rotary Motor In Atp Synthase From Yeast Mitochondria gi|9256941|pdb|1E1Q|D Chain D, Bovine Mitochondrial F1-Atpase At 100k gi|9256942|pdb|1E1Q|E Chain E, Bovine Mitochondrial F1-Atpase At 100k gi|9256943|pdb|1E1Q|F Chain F, Bovine Mitochondrial F1-Atpase At 100k gi|9256948|pdb|1E1R|D Chain D, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And Aluminium Fluoride gi|9256949|pdb|1E1R|E Chain E, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And Aluminium Fluoride gi|9256950|pdb|1E1R|F Chain F, Bovine Mitochondrial F1-Atpase Inhibited By Mg2+adp And Aluminium Fluoride gi|11514060|pdb|1E79|E Chain E, Bovine F1-Atpase Inhibited By Dccd (Dicyclohexylcarbodiimide) gi|11514061|pdb|1E79|F Chain F, Bovine F1-Atpase Inhibited By Dccd (Dicyclohexylcarbodiimide) gi|14278507|pdb|1H8H|D Chain D, Bovine Mitochondrial F1-Atpase Crystallised In The Presence Of 5mm Amppnp gi|14278508|pdb|1H8H|E Chain E, Bovine Mitochondrial F1-Atpase Crystallised In The Presence Of 5mm Amppnp gi|14278509|pdb|1H8H|F Chain F, Bovine Mitochondrial F1-Atpase Crystallised In The Presence Of 5mm Amppnp gi|15825705|pdb|1H8E|D Chain D, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic Sites Occupied) gi|15825706|pdb|1H8E|E Chain E, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic Sites Occupied) gi|15825707|pdb|1H8E|F Chain F, (Adp.Alf4)2(Adp.So4) Bovine F1-Atpase (All Three Catalytic Sites Occupied) gi|33357744|pdb|1OHH|D Chain D, Bovine Mitochondrial F1-Atpase Complexed With The Inhibitor Protein If1 gi|33357745|pdb|1OHH|E Chain E, Bovine Mitochondrial F1-Atpase Complexed With The Inhibitor Protein If1 gi|33357746|pdb|1OHH|F Chain F, Bovine Mitochondrial F1-Atpase Complexed With The Inhibitor Protein If1 gi|51247972|pdb|1W0J|D Chain D, Beryllium Fluoride Inhibited Bovine F1-Atpase gi|51247973|pdb|1W0J|E Chain E, Beryllium Fluoride Inhibited Bovine F1-Atpase gi|51247974|pdb|1W0J|F Chain F, Beryllium Fluoride Inhibited Bovine F1-Atpase gi|51247979|pdb|1W0K|D Chain D, Beryllium Fluoride Inhibited Bovine F1-Atpase gi|51247980|pdb|1W0K|E Chain E, Beryllium Fluoride Inhibited Bovine F1-Atpase gi|51247981|pdb|1W0K|F Chain F, Beryllium Fluoride Inhibited Bovine F1-Atpase gi|109157333|pdb|2CK3|D Chain D, Azide Inhibited Bovine F1-Atpase gi|109157334|pdb|2CK3|E Chain E, Azide Inhibited Bovine F1-Atpase gi|109157335|pdb|2CK3|F Chain F, Azide Inhibited Bovine F1-Atpase gi|145579794|pdb|2JDI|D Chain D, Ground State Structure Of F1-Atpase From Bovine Heart Mitochondria (Bovine F1-Atpase Crystallised In The Absence Of Azide) gi|145579795|pdb|2JDI|E Chain E, Ground State Structure Of F1-Atpase From Bovine Heart Mitochondria (Bovine F1-Atpase Crystallised In The Absence Of Azide) gi|145579796|pdb|2JDI|F Chain F, Ground State Structure Of F1-Atpase From Bovine Heart Mitochondria (Bovine F1-Atpase Crystallised In The Absence Of Azide) gi|158428985|pdb|2JIZ|D Chain D, The Structure Of F1-Atpase Inhibited By Resveratrol. gi|158428986|pdb|2JIZ|E Chain E, The Structure Of F1-Atpase Inhibited By Resveratrol. gi|158428987|pdb|2JIZ|F Chain F, The Structure Of F1-Atpase Inhibited By Resveratrol. gi|158428992|pdb|2JIZ|K Chain K, The Structure Of F1-Atpase Inhibited By Resveratrol. gi|158428993|pdb|2JIZ|L Chain L, The Structure Of F1-Atpase Inhibited By Resveratrol. gi|158428994|pdb|2JIZ|M Chain M, The Structure Of F1-Atpase Inhibited By Resveratrol. gi|158429002|pdb|2JJ1|D Chain D, The Structure Of F1-Atpase Inhibited By Piceatannol. gi|158429003|pdb|2JJ1|E Chain E, The Structure Of F1-Atpase Inhibited By Piceatannol. gi|158429004|pdb|2JJ1|F Chain F, The Structure Of F1-Atpase Inhibited By Piceatannol. gi|158429009|pdb|2JJ1|K Chain K, The Structure Of F1-Atpase Inhibited By Piceatannol. gi|158429010|pdb|2JJ1|L Chain L, The Structure Of F1-Atpase Inhibited By Piceatannol. gi|158429011|pdb|2JJ1|M Chain M, The Structure Of F1-Atpase Inhibited By Piceatannol. gi|158429016|pdb|2JJ2|D Chain D, The Structure Of F1-Atpase Inhibited By Quercetin. gi|158429017|pdb|2JJ2|E Chain E, The Structure Of F1-Atpase Inhibited By Quercetin. gi|158429018|pdb|2JJ2|F Chain F, The Structure Of F1-Atpase Inhibited By Quercetin. gi|158429023|pdb|2JJ2|K Chain K, The Structure Of F1-Atpase Inhibited By Quercetin. gi|158429024|pdb|2JJ2|L Chain L, The Structure Of F1-Atpase Inhibited By Quercetin. gi|158429025|pdb|2JJ2|M Chain M, The Structure Of F1-Atpase Inhibited By Quercetin. gi|158431069|pdb|2V7Q|D Chain D, The Structure Of F1-Atpase Inhibited By I1-60his, A Monomeric Form Of The Inhibitor Protein, If1. gi|158431070|pdb|2V7Q|E Chain E, The Structure Of F1-Atpase Inhibited By I1-60his, A Monomeric Form Of The Inhibitor Protein, If1. gi|158431071|pdb|2V7Q|F Chain F, The Structure Of F1-Atpase Inhibited By I1-60his, A Monomeric Form Of The Inhibitor Protein, If1. gi|268612201|pdb|2WSS|D Chain D, The Structure Of The Membrane Extrinsic Region Of Bovine Atp Synthase gi|268612202|pdb|2WSS|E Chain E, The Structure Of The Membrane Extrinsic Region Of Bovine Atp Synthase gi|268612203|pdb|2WSS|F Chain F, The Structure Of The Membrane Extrinsic Region Of Bovine Atp Synthase gi|268612210|pdb|2WSS|M Chain M, The Structure Of The Membrane Extrinsic Region Of Bovine Atp Synthase gi|268612211|pdb|2WSS|N Chain N, The Structure Of The Membrane Extrinsic Region Of Bovine Atp Synthase gi|268612212|pdb|2WSS|O Chain O, The Structure Of The Membrane Extrinsic Region Of Bovine Atp Synthase Length = 482 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 86 IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 144 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 145 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 203 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 204 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 263 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 264 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 321 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 322 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 381 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 382 LQDYKSLQDIIAILG 396 >gi|302558368|ref|ZP_07310710.1| ATP synthase F1, beta subunit [Streptomyces griseoflavus Tu4000] gi|302475986|gb|EFL39079.1| ATP synthase F1, beta subunit [Streptomyces griseoflavus Tu4000] Length = 478 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 163/299 (54%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 G+V N LG+ ++ D+ G+ I K P + + F+TG++VID+ TP G Sbjct: 100 TGKVFNTLGEVLNVDEQY-TGE-RWPIHRKAPNFDELESKTEMFETGVKVIDLLTPYVKG 157 Query: 162 QRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + I++ + K+ Sbjct: 158 GKIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIDEMSESGVIDKT 217 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G + Sbjct: 218 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 277 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD Sbjct: 278 PSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATT 335 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++E+G YP VDPL S SR+ D + +AD + +++ ++++ +DI I G Sbjct: 336 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYNAAMRVKNILQKYKDLQDIIAILG 394 >gi|322707678|gb|EFY99256.1| ATP synthase beta chain [Metarhizium anisopliae ARSEF 23] Length = 517 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 157/307 (51%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN G PID + K D + I S+ P +++ + TGI+V+D+ P Sbjct: 127 ATLGRIINVTGDPIDERGPI-KTDKFLPIHSEPPEFIDQSTSAEILVTGIKVVDLLAPYA 185 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 186 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 244 Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 245 QLDGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDQEGQDVLLFIDNIFRFTQAGSE 304 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 305 VSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATT 362 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SR+ D +E + + ++ ++ + Sbjct: 363 FAHLDATTVLSRGISELGIYPAVDPLDSTSRMLDPRIVGEEHYNTATRVQQILQEYKSLQ 422 Query: 388 DIRLIGG 394 DI I G Sbjct: 423 DIIAILG 429 >gi|148242960|ref|YP_001228117.1| F0F1 ATP synthase subunit beta [Synechococcus sp. RCC307] gi|190358708|sp|A5GV55|ATPB_SYNR3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|147851270|emb|CAK28764.1| ATP synthase beta [Synechococcus sp. RCC307] Length = 488 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 161/306 (52%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+P+D + K D + I P + + K F+TGI+VID+ P G Sbjct: 99 LGRIMNVLGEPVDEQGPV-KTDATAPIHRSAPKLTDLETKPKVFETGIKVIDLLAPYRQG 157 Query: 162 QRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------GD 212 ++G+F G+G+GK+ L+ + + + VGER RE + E++ D Sbjct: 158 GKVGLFGGAGMGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKDSGVINAD 217 Query: 213 NLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 +L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + E+ Sbjct: 218 DLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGSEV 277 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 278 SALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPATTF 335 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + A DE K ++ + R++E +D Sbjct: 336 AHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGDEHYKTARAVQSTLQRYKELQD 395 Query: 389 IRLIGG 394 I I G Sbjct: 396 IIAILG 401 >gi|153007332|ref|YP_001381657.1| F0F1 ATP synthase subunit beta [Anaeromyxobacter sp. Fw109-5] gi|190358251|sp|A7HIX7|ATPB_ANADF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|152030905|gb|ABS28673.1| ATP synthase F1, beta subunit [Anaeromyxobacter sp. Fw109-5] Length = 481 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 162/306 (52%), Gaps = 18/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR++N +G P+D + + + + P + Q V+ + F+TGI+VID+ P G Sbjct: 96 GRILNVVGDPVDERGPVAS--VRKFPIHRPAPTLVDQNVKIEAFETGIKVIDLLAPYLRG 153 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL--GD 212 +IG+F G+G+GK+ LL + + + + VGER RE E IE + D Sbjct: 154 GKIGLFGGAGVGKTVLLMELVNNVAKKRGGFSVFAGVGERTREGNDLYHEMIESGVINKD 213 Query: 213 NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 +L KS V+V +E P R L+A+ IAEYF + ++LL +D+I RF + E+ Sbjct: 214 DLSKSQCVLVYGQMNEPPGARARVALSALAIAEYFRDEEKRDMLLFIDNIFRFTQAGSEV 273 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G IT+V ++ V D+ DP + Sbjct: 274 SALLGRIPSAVGYQPTLSTEMGELQERI--TSTKNGAITSVQAIYVPADDLTDPAPATAF 331 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRD 388 + LD VL+R L E G YP VDPL S SR+ D A+ ++ + + R+++ +D Sbjct: 332 AHLDATTVLSRKLTEIGIYPAVDPLDSTSRILDPLVVGAEHYQVAREVQETLQRYKDLQD 391 Query: 389 IRLIGG 394 I I G Sbjct: 392 IIAILG 397 >gi|28461221|ref|NP_786990.1| ATP synthase subunit beta, mitochondrial precursor [Bos taurus] gi|114543|sp|P00829|ATPB_BOVIN RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|262118383|pdb|2W6E|D Chain D, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 1. gi|262118384|pdb|2W6E|E Chain E, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 1. gi|262118385|pdb|2W6E|F Chain F, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 1. gi|262118390|pdb|2W6F|D Chain D, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 2. gi|262118391|pdb|2W6F|E Chain E, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 2. gi|262118392|pdb|2W6F|F Chain F, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 2. gi|262118397|pdb|2W6I|D Chain D, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 4b. gi|262118398|pdb|2W6I|E Chain E, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 4b. gi|262118399|pdb|2W6I|F Chain F, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 4b. gi|262118406|pdb|2W6J|D Chain D, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 5. gi|262118407|pdb|2W6J|E Chain E, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 5. gi|262118408|pdb|2W6J|F Chain F, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 5. gi|262306977|pdb|2W6G|D Chain D, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 3. gi|262306978|pdb|2W6G|E Chain E, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 3. gi|262306979|pdb|2W6G|F Chain F, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 3. gi|262306984|pdb|2W6H|D Chain D, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 4a. gi|262306985|pdb|2W6H|E Chain E, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 4a. gi|262306986|pdb|2W6H|F Chain F, Low Resolution Structures Of Bovine Mitochondrial F1-Atpase During Controlled Dehydration: Hydration State 4a. gi|162711|gb|AAA30395.1| F-1-ATPase beta-subunit precursor [Bos taurus] gi|94574271|gb|AAI16100.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Bos taurus] gi|296487629|gb|DAA29742.1| mitochondrial ATP synthase beta subunit precursor [Bos taurus] Length = 528 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 132 IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 190 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 191 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 249 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 250 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 309 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 310 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 367 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 368 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 427 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 428 LQDYKSLQDIIAILG 442 >gi|47605558|sp|Q9PTY0|ATPB_CYPCA RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|5689156|dbj|BAA82837.1| ATP synthase beta-subunit [Cyprinus carpio] Length = 518 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 122 IRIPVGPETLGRIMNVIGEPIDERGPITTKQ-TAPIHAEAPEFTDMSVEQEILVTGIKVV 180 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 181 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 239 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 240 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 299 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 300 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 357 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 358 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 417 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 418 LQDYKSLQDIIAILG 432 >gi|226354914|ref|YP_002784654.1| V-type ATP synthase subunit B [Deinococcus deserti VCD115] gi|259710370|sp|C1CXU4|VATB_DEIDV RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|226316904|gb|ACO44900.1| putative V-type ATP synthase beta chain (V-type ATPase subunit B) [Deinococcus deserti VCD115] Length = 471 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 151/276 (54%), Gaps = 11/276 (3%) Query: 94 RISPSACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ S GR + LG+PIDG + + LS+ + P A R + E+ +TGI I Sbjct: 81 RLGVSKEMIGRRFDGLGRPIDGLPQVVAEQRLSINGQAMNPAA--RAKPEEFIQTGISTI 138 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFI 206 D+ T L GQ++ +F+GSG+ + L + AR V+ + +G REV F Sbjct: 139 DVQTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDFAVVFAAMGLTQREVSFFT 198 Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264 +++ L +SV+ + +D+ + R + P A+T AEY + G +VL+IL +T + Sbjct: 199 QEFERTGALARSVLFLNKADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDLTNYCE 258 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI E+P RG+P ++++L L ER G E + G++T V + + D+ PI Sbjct: 259 ALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVEGKPGSVTQVPILSMPDDDITHPI 318 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 D I +G IV++R+L +G +PP++PL S+SRL Sbjct: 319 PDLTGYITEGQIVVDRTLNSKGVFPPINPLPSLSRL 354 >gi|23397307|gb|AAN31935.1| unknown protein [Arabidopsis thaliana] Length = 446 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 18/275 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID + K + + I P ++ ++ TGI+V+D+ P Sbjct: 54 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 112 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 113 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 171 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LG+ +S +V +E P R LT +T+AEYF ++G +VLL +D+I RF + Sbjct: 172 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 231 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ S+L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 232 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 289 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 290 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 324 >gi|317154799|ref|YP_004122847.1| ATP synthase F1 subunit beta [Desulfovibrio aespoeensis Aspo-2] gi|316945050|gb|ADU64101.1| ATP synthase F1, beta subunit [Desulfovibrio aespoeensis Aspo-2] Length = 465 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 162/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR++N +G+P D +G + + ++ P+ Q + + +TGI+V+D+ P Sbjct: 91 GRIMNVVGEPAD---EMGPIPCEKRMPIHRLAPSFTEQSTKVELLETGIKVVDLLIPFPK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G ++G+F G+G+GK+ +L + IS+ VGER RE + + L+K Sbjct: 148 GGKMGLFGGAGVGKTVILMEMINNIAKQHGGISVFAGVGERTREGNDLYHEMKDAGVLEK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LTA+T AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 AALVYGQMNEPPGARARVALTALTCAEYFRDEEGQDVLLFVDNIFRFTQAGAEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + S LDG Sbjct: 268 MPSAVGYQPTLGTDLGGLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFSHLDGT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R+++E G YP VDPL S SR+ D + + ++ +++E +DI I G Sbjct: 326 LVLSRAISELGIYPAVDPLDSTSRILDPHVIGEVHYATAREVQSVLQKYKELQDIIAILG 385 >gi|222150025|ref|YP_002550982.1| ATP synthase F1, beta subunit [Agrobacterium vitis S4] gi|221737007|gb|ACM37970.1| ATP synthase F1, beta subunit [Agrobacterium vitis S4] Length = 485 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 98/313 (31%), Positives = 157/313 (50%), Gaps = 26/313 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D LG + I P + + + TGI+V+D+ P Sbjct: 93 LGRILNVIGEPVD---ELGPVTTTARRAIHQPAPEYVEQSTESQILVTGIKVVDLLAPYA 149 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK 215 G +IG+F G+G+GK+ L+ + A++ V VGER RE + + + + Sbjct: 150 KGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESKVN 208 Query: 216 -------------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 K +V +E P R LT +TIAE F KG +VL +D+I RF Sbjct: 209 VDPHENGGSAAGSKCALVYGQMNEPPGARARVALTGLTIAEDFRDKGQDVLFFVDNIFRF 268 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ D Sbjct: 269 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSITSVQAIYVPADDLTD 326 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VLNRS+AE+G YP VDPL S SR+ D +E ++ + + Sbjct: 327 PAPATSFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQ 386 Query: 382 RFEETRDIRLIGG 394 R++ +DI I G Sbjct: 387 RYKSLQDIIAILG 399 >gi|294790387|ref|ZP_06755545.1| ATP synthase F1, beta subunit [Scardovia inopinata F0304] gi|294458284|gb|EFG26637.1| ATP synthase F1, beta subunit [Scardovia inopinata F0304] Length = 495 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 147/273 (53%), Gaps = 9/273 (3%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I PP + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 138 IHRAAPPFDQLESKTEMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 197 Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + +S+ VGER RE + I E L K+ +V DE P R PLTA+T+AE Sbjct: 198 NHGGVSVFAGVGERTREGNDLIGEMEEAGVLGKTALVFGQMDEPPGTRLRVPLTALTMAE 257 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 258 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERI--TST 315 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL+S SR+ D Sbjct: 316 RGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILD 375 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRD-IRLIG 393 + + + ++ R +E +D I LIG Sbjct: 376 PRYVGQAHYDCANRVKAILQRNKELQDIIALIG 408 >gi|73968432|ref|XP_531639.2| PREDICTED: similar to ATP synthase beta chain, mitochondrial precursor isoform 1 [Canis familiaris] Length = 527 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 140 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKG 198 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 199 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 257 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 258 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 317 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 318 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 375 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 376 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 435 Query: 389 IRLIGG 394 I I G Sbjct: 436 IIAILG 441 >gi|163732295|ref|ZP_02139741.1| F0F1 ATP synthase subunit beta [Roseobacter litoralis Och 149] gi|161394593|gb|EDQ18916.1| F0F1 ATP synthase subunit beta [Roseobacter litoralis Och 149] Length = 474 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 165/319 (51%), Gaps = 20/319 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G I GR++N +G+PID + + D I + P + + +TGI+ Sbjct: 75 GPISIPVGNATLGRIMNVVGEPIDEKGPV-ESDEKRSIHQEAPAFAEQSTSSEVLETGIK 133 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE---- 201 VID+ P G +IG+F G+G+GK+ L+ + KV + + VGER RE Sbjct: 134 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDL 191 Query: 202 VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256 E IE + DNL +S V V +E P R LT +T+AE F + G +VL + Sbjct: 192 YHEMIESAVIVPDNLTESKVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFV 251 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ ++ ERI + + G+IT+V +V V Sbjct: 252 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKAGSITSVQAVYVP 309 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R+++E G YP VDPL S SRL D +E V+ Sbjct: 310 ADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPQVLGEEHYNVARD 369 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ R++ +DI I G Sbjct: 370 VQGILQRYKSLQDIIAILG 388 >gi|71370846|gb|AAZ30652.1| ATP synthase beta subunit [Lineus viridis] Length = 427 Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 102/315 (32%), Positives = 160/315 (50%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID + D I ++ P + ++ TGI+V+ Sbjct: 55 IRIPVGPETLGRIINVIGEPIDERGPV-PTDRRASIHAEAPEFVEMSVQQEILATGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 114 DMLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 173 MIEGGVINLKDDSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR+ D +E + + + Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGEEHYTTARGVQKI 350 Query: 380 IHRFEETRDIRLIGG 394 + + +DI I G Sbjct: 351 LQDYRSLQDIIAILG 365 >gi|296413156|ref|XP_002836282.1| hypothetical protein [Tuber melanosporum Mel28] gi|295630095|emb|CAZ80473.1| unnamed protein product [Tuber melanosporum] Length = 480 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 158/304 (51%), Gaps = 16/304 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PID + ++ I ++ PP +++ + TGI+V+D+ P G Sbjct: 93 GRIMNVTGDPIDERGPIKAAKMA-PIHAEAPPFVDQSTTAEILVTGIKVVDLLAPYARGG 151 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 +IG+F G+G+GK+ L++ A++ V VGER RE + + D Sbjct: 152 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQLD 210 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 211 GDSKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSA 270 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++ ++ ERI + +KG+IT+V +V V D+ DP + + Sbjct: 271 LLGRIPSAVGYQPTLSVDMGQMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAH 328 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD VL+R ++E G YP VDPL S SR+ D +E + + ++ ++ +DI Sbjct: 329 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPKIVGEEHYNTATRVQRMLQEYKSLQDII 388 Query: 391 LIGG 394 I G Sbjct: 389 AILG 392 >gi|254804251|ref|YP_003082472.1| ATP synthase beta chain [Neisseria meningitidis alpha14] gi|254667793|emb|CBA03755.1| ATP synthase beta chain [Neisseria meningitidis alpha14] Length = 465 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|261378159|ref|ZP_05982732.1| ATP synthase F1, beta subunit [Neisseria cinerea ATCC 14685] gi|269145622|gb|EEZ72040.1| ATP synthase F1, beta subunit [Neisseria cinerea ATCC 14685] Length = 465 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSSATELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|253580458|ref|ZP_04857723.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39B_FAA] gi|251848188|gb|EES76153.1| F0F1-type ATP synthase, beta subunit [Ruminococcus sp. 5_1_39BFAA] Length = 465 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR-VEKGFKTGIRVIDIFTPLCH 160 GR+ N LG +D SL +G+ ++ + PP Q+ + +TGI+VID+ P Sbjct: 85 LGRLFNVLGDTVDDGPSL-EGEQKW-VIHRDPPDFEHQKPAVEILETGIKVIDLLAPYAK 142 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ ++ + I + VGER RE + + L+K Sbjct: 143 GGKIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWSEMKESGVLEK 202 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R T +T+AEYF + +VLL +D+I RF + E++ G Sbjct: 203 TALVFGQMNEPPGSRMRVAETGLTMAEYFRDEEHRDVLLFIDNIFRFVQAGSEVSALLGR 262 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD Sbjct: 263 MPSAVGYQPTLATEMGELQERIASTKD--GSVTSVQAVYVPADDLTDPAPATTFAHLDAT 320 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R + E+G YP VDPL S SR+ + +E ++ + ++ +++E +DI I G Sbjct: 321 TVLSRKIVEQGIYPAVDPLESTSRILEPDVVGEEHYEVARKVQEILQKYKELQDIIAILG 380 >gi|302567343|gb|ADL41370.1| ATP synthase B subunit [Parallela novae-zelandiae] Length = 401 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +G + S+ I P ++ F+TGI+V+D+ P Sbjct: 41 ATLGRIFNVLGEPVDNLGPVGNQE-SLPIHRPAPAFVDLDTRLSIFETGIKVVDLLAPYR 99 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 100 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 159 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 160 EKNLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQA 217 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 218 GAEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAP 275 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W EK + ++ + R+ Sbjct: 276 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYETAQNVKRTLQRY 334 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 335 KELQDIIAILG 345 >gi|23503589|dbj|BAC20391.1| ATP synthase beta-subunit [Scenedesmus quadricauda] Length = 376 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 106/327 (32%), Positives = 165/327 (50%), Gaps = 27/327 (8%) Query: 87 VFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEK 143 VF G+ + GR+ N LG+P+D +LG K + S+ I P ++ Sbjct: 15 VFDTGKPLSVPVGKATLGRIFNVLGEPVD---NLGPVKNEESLPIHRTAPAFVDLDTRLS 71 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGR 200 F+TGI+V+D+ P G +IG+F G+G+GK+ L+ + +S+ VGER R Sbjct: 72 IFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTR 131 Query: 201 EVREF----------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KG 249 E + +E L D+ K +V +E P R LTA+T+AEYF Sbjct: 132 EGNDLYTEMKESGVIVEKNLTDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNK 189 Query: 250 DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VL +D+I RF + E++ G +P A GY ++ +E+ L ERI + + G+IT+ Sbjct: 190 QDVLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITS 247 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + +V V D+ DP + + LD VL+R LA +G YP VDPL S S + + W E Sbjct: 248 IQAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGE 306 Query: 370 KKL--VSSLTHLIHRFEETRDIRLIGG 394 K S+ + R++E +DI I G Sbjct: 307 KHYGCAQSVKRTLQRYKELQDIIAILG 333 >gi|303325905|ref|ZP_07356348.1| ATP synthase F1, beta subunit [Desulfovibrio sp. 3_1_syn3] gi|302863821|gb|EFL86752.1| ATP synthase F1, beta subunit [Desulfovibrio sp. 3_1_syn3] Length = 473 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 158/304 (51%), Gaps = 15/304 (4%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR++N +G+P+D LG + I P ++ + +TGI+V+D+ P Sbjct: 89 AAVGRILNVIGRPVD---ELGPVNAEKYYPIHRPAPGFTDQNTKVELLETGIKVVDLLVP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G ++G+F G+G+GK+ +L + A+ V VGER RE + + Sbjct: 146 FPKGGKMGLFGGAGVGKTVILMEMINNIAKQHGGSSVFAG-VGERTREGNDLYNELKEAG 204 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 L+++ +V +E P R LTA+ AEYF + +VLL +D+I RF + E++ Sbjct: 205 VLERATLVYGQMNEPPGARARVALTALACAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++L L ERI + G+IT+V +V V D+ DP + S Sbjct: 265 LLGRMPSAVGYQPTLGTDLGALQERI--TSTNSGSITSVQAVYVPADDLTDPAPATTFSH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEETRDIR 390 LDG +VL+R +AE G YP VDPL S SR+ D +E V+ ++ +++E +DI Sbjct: 323 LDGTLVLSRQIAELGIYPAVDPLDSTSRILDPNVVGEEHYSVARRVQMVLQKYKELQDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|303231155|ref|ZP_07317893.1| ATP synthase F1, beta subunit [Veillonella atypica ACS-049-V-Sch6] gi|302514062|gb|EFL56066.1| ATP synthase F1, beta subunit [Veillonella atypica ACS-049-V-Sch6] Length = 474 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D D + D I P + + +TGI+V+D+ P G Sbjct: 92 LGRIFNVLGETVDHDSAPVVADEMWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + + S VGER RE + + + K+ Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D DE V+ + ++ ++ + +DI I G Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHILGDEHYNVARGVQEVLQKYRDLQDIIAILG 388 >gi|261400612|ref|ZP_05986737.1| ATP synthase F1, beta subunit [Neisseria lactamica ATCC 23970] gi|313669152|ref|YP_004049436.1| ATP synthase beta chain [Neisseria lactamica ST-640] gi|269209698|gb|EEZ76153.1| ATP synthase F1, beta subunit [Neisseria lactamica ATCC 23970] gi|309379543|emb|CBX21909.1| ATP synthase F1, beta subunit [Neisseria lactamica Y92-1009] gi|313006614|emb|CBN88080.1| ATP synthase beta chain [Neisseria lactamica 020-06] Length = 465 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|302529782|ref|ZP_07282124.1| ATP synthase F1, beta subunit [Streptomyces sp. AA4] gi|302438677|gb|EFL10493.1| ATP synthase F1, beta subunit [Streptomyces sp. AA4] Length = 476 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 166/299 (55%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG+ +D + G+ DL + + PP ++ + + +TG++V+D+ TP G Sbjct: 98 GHVYNALGECLD-EPGYGE-DLERWGIHRNPPPFDQLEGKTEMLETGLKVVDLLTPYVQG 155 Query: 162 QRIGVFAGSGIGKSTLL-SMFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E + + Sbjct: 156 GKIGLFGGAGVGKTVLIKEMITRVARNFGGTSVFAGVGERTREGNDLFLEMSEDGVINDT 215 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 216 ALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 275 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 276 PSAVGYQPTLADEMGQLQERITSTRGR--SITSMQAIYVPADDYTDPAPATTFAHLDATT 333 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ ++G +P VDPLAS S + D A D ++ S + ++ +++E +DI I G Sbjct: 334 ELSRSVFQKGIFPAVDPLASTSTILDPAIVGEDHYRVASEVIRILQKYKELQDIIAILG 392 >gi|195478613|ref|XP_002086515.1| GE23170 [Drosophila yakuba] gi|194186305|gb|EDW99916.1| GE23170 [Drosophila yakuba] Length = 627 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 107/315 (33%), Positives = 161/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R++ GR++N +G PID D K D I ++ P + + TGI+VI Sbjct: 178 IRVAVGKAVLGRILNVVGDPID-DRGEIKSDYYSFIHNEAPELTDLSVKPEILVTGIKVI 236 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A+S V + GER RE E Sbjct: 237 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 295 Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 IE L D K V+V +E P R LT +TIAEYF G +VLL +D+I Sbjct: 296 MIESKVISLEDESSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIF 355 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + G+IT+V +V V D+ Sbjct: 356 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 413 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 +DP + S LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ Sbjct: 414 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKT 473 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 474 LQAYKSLQDIIAILG 488 >gi|145342447|ref|XP_001416194.1| ATP synthase beta chain, mitochondrial precursor [Ostreococcus lucimarinus CCE9901] gi|144576419|gb|ABO94487.1| ATP synthase beta chain, mitochondrial precursor [Ostreococcus lucimarinus CCE9901] Length = 530 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 158/310 (50%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + S+ I + PP +++ + TGI+V+D+ P Sbjct: 139 ATLGRIMNVIGEPIDECGPIST-STSLGIHREAPPFVDQSTEMEMLVTGIKVVDLLAPYQ 197 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L++ A+ V VGER RE E IE Sbjct: 198 KGGKIGLFGGAGVGKTVFIMELINNIAKGHGGFSVFAG-VGERTREGNDLYHEMIEGGVI 256 Query: 209 YLGDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 LGD K +V +E P R LT +T+AEYF +G +VL +D+I RF + Sbjct: 257 KLGDQASDSKCTLVYGQMNEPPGARARVGLTGLTVAEYFRDFEGQDVLFFVDNIFRFTQA 316 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++L L ERI + KG+IT+V ++ V D+ DP Sbjct: 317 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAIYVPADDLTDPAP 374 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+RS+AE G YP VDPL S SR+ DE + ++ ++ Sbjct: 375 ATTFAHLDATTVLSRSIAEIGIYPAVDPLDSTSRMLSPLTLGDEHYNTARGVQKILQDYK 434 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 435 NLQDIIAILG 444 >gi|221069420|ref|ZP_03545525.1| ATP synthase F1, beta subunit [Comamonas testosteroni KF-1] gi|220714443|gb|EED69811.1| ATP synthase F1, beta subunit [Comamonas testosteroni KF-1] Length = 469 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 105/341 (30%), Positives = 170/341 (49%), Gaps = 20/341 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G +V + G P GR+++ LG PID + + L+ Sbjct: 51 VVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGDVDQA-LTAP 109 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ +P G ++G+F G+G+GK+ L++ A+ Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLISPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGD---------NLKKSVVVVATSDESPILRKMA 234 V VGER RE +F + + D N K +V +E P R Sbjct: 170 GHGGLSVFAG-VGERTREGNDFYHE-MSDAGVVNQANLNESKVAMVYGQMNEPPGNRLRV 227 Query: 235 PLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 LT +T+AE F +G +VL +D+I R+ + E++ G +P A GY ++ E+ +L Sbjct: 228 ALTGLTMAEAFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQ 287 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ERI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL Sbjct: 288 ERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPL 345 Query: 355 ASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 S SR D +E K+ + + R++E RDI I G Sbjct: 346 DSTSRQLDPQVVGEEHYKVARQVQGTLQRYKELRDIIAILG 386 >gi|82889077|gb|ABB92859.1| ATP synthase F1 beta subunit [Wolbachia pipientis] gi|82889079|gb|ABB92860.1| ATP synthase F1 beta subunit [Wolbachia pipientis] gi|82889081|gb|ABB92861.1| ATP synthase F1 beta subunit [Wolbachia pipientis] Length = 310 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 93/272 (34%), Positives = 147/272 (54%), Gaps = 20/272 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GRV N +G+ ID L KG +E + + PP+ Q++ E+ TGI+VID+ P G Sbjct: 18 GRVFNVVGELIDECGPL-KGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKG 76 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 77 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYNEMITSNVIN 134 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGS 194 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 195 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTAGSITSVQAIYVPADDLTDPAPAT 252 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 S LD VL+R +AE G YP VDPL S S+ Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQ 284 >gi|91795097|ref|YP_564748.1| F0F1 ATP synthase subunit beta [Shewanella denitrificans OS217] gi|123165633|sp|Q12HQ1|ATPB_SHEDO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|91717099|gb|ABE57025.1| ATP synthase F1, beta subunit [Shewanella denitrificans OS217] Length = 463 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 105/329 (31%), Positives = 170/329 (51%), Gaps = 17/329 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + + I P ++ + +TGI+VID+ P Sbjct: 85 ATLGRIMNVLGEPIDECGEIGEEERYV-IHRSAPSYEDQSSSTELLETGIKVIDLVCPFA 143 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + L Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R L+ +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVANGVQTVLQRYKELKDIIAI- 379 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQ 419 G+D + D+ AV + I FL Q Sbjct: 380 ---LGMDELSDEDKTAVARARKIERFLSQ 405 >gi|194873278|ref|XP_001973175.1| GG15949 [Drosophila erecta] gi|190654958|gb|EDV52201.1| GG15949 [Drosophila erecta] Length = 630 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 107/315 (33%), Positives = 161/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R++ GR++N +G PID D K D I ++ P + + TGI+VI Sbjct: 178 IRVAVGKAVLGRILNVVGDPID-DRGEIKSDFYSFIHNEAPELTDLSVKPEILVTGIKVI 236 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A+S V + GER RE E Sbjct: 237 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 295 Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 IE L D K V+V +E P R LT +TIAEYF G +VLL +D+I Sbjct: 296 MIESKVISLEDESSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIF 355 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + G+IT+V +V V D+ Sbjct: 356 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 413 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 +DP + S LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ Sbjct: 414 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKT 473 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 474 LQAYKSLQDIIAILG 488 >gi|47575824|ref|NP_001001256.1| mitochondrial ATP synthase beta subunit [Xenopus (Silurana) tropicalis] gi|45767611|gb|AAH67388.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Xenopus (Silurana) tropicalis] gi|89269884|emb|CAJ83426.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Xenopus (Silurana) tropicalis] Length = 525 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/282 (33%), Positives = 149/282 (52%), Gaps = 16/282 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 129 IRIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 187 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 188 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 246 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 247 MIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 306 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 307 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 364 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD VL+R++AE G YP VDPL S SR+ D Sbjct: 365 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 406 >gi|3660252|pdb|1NBM|E Chain E, The Structure Of Bovine F1-Atpase Covalently Inhibited With 4-Chloro-7-Nitrobenzofurazan Length = 480 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 162/315 (51%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 86 IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 144 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 145 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 203 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 204 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 263 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 264 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIXVPADDL 321 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 322 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 381 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 382 LQDYKSLQDIIAILG 396 >gi|282899706|ref|ZP_06307670.1| ATP synthase F1, beta subunit [Cylindrospermopsis raciborskii CS-505] gi|281195585|gb|EFA70518.1| ATP synthase F1, beta subunit [Cylindrospermopsis raciborskii CS-505] Length = 482 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + ++ I + P + + F+TGI+V+D+ TP Sbjct: 95 ATLGRIFNVLGEPVDNQGPVNNEE-TLPIHRESPKLTDLETKPSVFETGIKVVDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210 G +IG+F G+G+GK+ ++ + +S+ VGER RE E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +NL +S +V +E P R L+ +T+AEYF +VLL +D+I RF + Sbjct: 214 KENLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + + E + S+ + R++E Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPSIVGKEHYDIARSVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|170077372|ref|YP_001734010.1| F0F1 ATP synthase subunit beta [Synechococcus sp. PCC 7002] gi|169885041|gb|ACA98754.1| ATP synthase beta chain [Synechococcus sp. PCC 7002] Length = 483 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 159/306 (51%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D +G + S I P F+TGI+V+D+ TP G Sbjct: 96 LGRIFNVLGEPVDEKGEVGAEETS-PIHRPAPKLTELDTAPSVFETGIKVVDLLTPYRRG 154 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL--GD 212 +IG+F G+G+GK+ ++ + + +S+ VGER RE E IE + D Sbjct: 155 GKIGLFGGAGVGKTVIMMELINNIATNHGGVSVFAGVGERTREGNDLYNEMIESGVINPD 214 Query: 213 NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL S +V +E P R L+ +T+AEYF +VLL +D+I RF + E+ Sbjct: 215 NLNDSKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEV 274 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 275 SALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 332 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388 + LDG VL+R+LA +G YP VDPL S S + + D ++ + R++E +D Sbjct: 333 AHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPSIVGEDHYNTARAVQSTLQRYKELQD 392 Query: 389 IRLIGG 394 I I G Sbjct: 393 IIAILG 398 >gi|23272966|gb|AAH37127.1| Atp5b protein [Mus musculus] Length = 533 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 145 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 203 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 204 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 262 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 263 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 322 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 323 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 380 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 381 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 440 Query: 389 IRLIGG 394 I I G Sbjct: 441 IIAILG 446 >gi|296170251|ref|ZP_06851844.1| ATP synthase F1 sector beta subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895127|gb|EFG74845.1| ATP synthase F1 sector beta subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 488 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 162/301 (53%), Gaps = 15/301 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLC 159 G V NALG D D G G D + + PPA R E +TG++V+D+ TP Sbjct: 107 GHVFNALG---DCLDKPGYGEDFEHWSIHRKPPAFEELEPRTEM-LETGLKVVDLLTPYV 162 Query: 160 HGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215 G +I +F G+G+GK+ L+ M R + + + VGER RE + ++E D LK Sbjct: 163 RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELKEADVLK 222 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 + +V DE P R L+A+T+AE+F + G +VLL +D+I RF + E++T G Sbjct: 223 DTALVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLG 282 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 283 RMPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDA 340 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 L+RS+ +G +P VDPLAS S + D + DE ++ + ++ R+++ +DI I Sbjct: 341 TTELSRSVFSKGIFPAVDPLASSSTILDPSVVGDEHYRVAQEVIRILQRYKDLQDIIAIL 400 Query: 394 G 394 G Sbjct: 401 G 401 >gi|296313936|ref|ZP_06863877.1| ATP synthase F1, beta subunit [Neisseria polysaccharea ATCC 43768] gi|296839474|gb|EFH23412.1| ATP synthase F1, beta subunit [Neisseria polysaccharea ATCC 43768] Length = 465 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQTAPKFDELSATTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|171110|gb|AAA34444.1| F1-ATPase beta-subunit precursor [Saccharomyces cerevisiae] Length = 511 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 105/306 (34%), Positives = 161/306 (52%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K L I + P + + +TGI+V+D+ P G Sbjct: 125 LGRIINVIGEPIDERGPI-KSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFAG-VGERTREGNDLYREMKETGV-IN 241 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 242 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 301 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 302 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPSPSTSF 359 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ +D Sbjct: 360 AHLDASSVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASKVQETLQTYKSLQD 419 Query: 389 IRLIGG 394 I I G Sbjct: 420 IIAILG 425 >gi|323450237|gb|EGB06119.1| hypothetical protein AURANDRAFT_59236 [Aureococcus anophagefferens] Length = 473 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 161/315 (51%), Gaps = 20/315 (6%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GR++N +G+ +D D K + I P + + + ++ TGI+V+D+ Sbjct: 80 PVGPECLGRIVNVIGEAVD-DAGPVKTKIQFPIHRAPPTFVEQGKTQEILTTGIKVVDLL 138 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ ++ + + + + VGER RE E IE Sbjct: 139 APYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGYSVFAGVGERTREGNDLYHEMIES 198 Query: 209 ---YLGDNL----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 +GD K+ +V +E P R LT +TIAEYF +G +VL +D+I Sbjct: 199 GVIKIGDGHDTTGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLFFVDNIF 258 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ Sbjct: 259 RFTQAGAEVSALLGRIPSAVGYQPTLATDMGGLQERI--TSTTKGSITSVQAVYVPADDL 316 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R +A G YP VDPL S SR+ D +E V+ S+ L Sbjct: 317 TDPAPATTFAHLDAQTVLSRDIASLGIYPAVDPLDSSSRMMDPRIVGEEHYGVARSVQKL 376 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 377 LQDYKSLQDIIAILG 391 >gi|297183580|gb|ADI19707.1| hypothetical protein [uncultured bacterium EB000_36F02] Length = 473 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 164/330 (49%), Gaps = 18/330 (5%) Query: 79 EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 E + GD V G ++ GR+IN +G+PID + D S I P Sbjct: 61 EGLKRGDEVIDTGTPIKVPVGPETLGRIINVIGEPIDQKGPIKTKD-SWPIHRPAPLFTE 119 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIIS 193 + + TGI+V+D+ P G ++G+F G+G+GK+ L++ A++ V Sbjct: 120 QSTETEILVTGIKVVDLLAPYAKGGKVGLFGGAGVGKTVIIMELINNIAKAHGGFSVFAG 179 Query: 194 LVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYF- 245 VGER RE + + + + K+ +V +E P R LT +T+AEYF Sbjct: 180 -VGERTREGNDLYHEMIESGVIKPDGKGSKAALVYGQMNEPPGARSRVGLTGLTVAEYFR 238 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +++ L ERI + KG Sbjct: 239 DQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKG 296 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V ++ V D+ DP + + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 297 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRI 356 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE ++ + ++ ++ +DI I G Sbjct: 357 VGDEHYRVAREVQKILQTYKSLQDIIAILG 386 >gi|74204509|dbj|BAE35331.1| unnamed protein product [Mus musculus] Length = 529 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|74197074|dbj|BAE35088.1| unnamed protein product [Mus musculus] Length = 529 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|242129046|gb|ACS83602.1| ATP synthase beta subunit 1 [Gossypium hirsutum] Length = 557 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 163/310 (52%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+PID L K D + I + P +++ ++ TGI+V+D+ P Sbjct: 165 ATLGRIINVIGEPIDEKGEL-KTDHFLPIHREAPAFVDQATEQQILVTGIKVVDLLAPYQ 223 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 224 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 282 Query: 209 YLGDNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LG+ K +V +E P R LT +T+AE+F ++G +VLL +D+I RF + Sbjct: 283 KLGEKQADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 342 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 343 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 400 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SR+ +E + ++ ++ Sbjct: 401 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYK 460 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 461 NLQDIIAILG 470 >gi|260800391|ref|XP_002595117.1| hypothetical protein BRAFLDRAFT_113766 [Branchiostoma floridae] gi|229280359|gb|EEN51128.1| hypothetical protein BRAFLDRAFT_113766 [Branchiostoma floridae] Length = 523 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 103/316 (32%), Positives = 163/316 (51%), Gaps = 19/316 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID + + I + P + ++ +TGI+V+ Sbjct: 128 IRIPVGPETLGRIINVIGEPIDERGPV-DSKKTAAIHADAPEFVEMSVEQEILETGIKVV 186 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 187 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 245 Query: 205 FIE----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 IE D GD K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 246 MIESGVIDLKGDK-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNI 304 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 305 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 362 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DP + + LD VL+R ++E G YP VDPL S SR+ D +E V+ S+ Sbjct: 363 LTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSTSRILDPNIVGEEHYTVARSVQK 422 Query: 379 LIHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 423 TLQDYKSLQDIIAILG 438 >gi|74139650|dbj|BAE40961.1| unnamed protein product [Mus musculus] Length = 529 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|146278237|ref|YP_001168396.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides ATCC 17025] gi|189081340|sp|A4WUM7|ATPB_RHOS5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|145556478|gb|ABP71091.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides ATCC 17025] Length = 475 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + GD + I P + + TGI+VID+ P Sbjct: 85 ATLGRILNVIGEPIDEKGPV-SGDSTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYS 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG--- 211 G +IG+F G+G+GK+ L+ + KV + + VGER RE + + + Sbjct: 144 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIDSGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 DNL +S V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 202 IKIDNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP Sbjct: 262 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGSITSVQAIYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R+++E G YP VDPL S SR+ D +E V+ ++ ++ R++ Sbjct: 320 ATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQIVGEEHYNVARAVQGILQRYK 379 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 380 SLQDIIAILG 389 >gi|303230068|ref|ZP_07316840.1| ATP synthase F1, beta subunit [Veillonella atypica ACS-134-V-Col7a] gi|302515278|gb|EFL57248.1| ATP synthase F1, beta subunit [Veillonella atypica ACS-134-V-Col7a] Length = 474 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D D + D I P + + +TGI+V+D+ P G Sbjct: 92 LGRIFNVLGETVDHDSAPVVADEMWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + + S VGER RE + + + K+ Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D DE V+ + ++ ++ + +DI I G Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGDEHYNVARGVQEVLQKYRDLQDIIAILG 388 >gi|260888964|ref|ZP_05900227.1| ATP synthase F1, beta subunit [Leptotrichia hofstadii F0254] gi|260861411|gb|EEX75911.1| ATP synthase F1, beta subunit [Leptotrichia hofstadii F0254] Length = 465 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 102/302 (33%), Positives = 160/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR+ N LG+ +D + L D+ E + K P+ +Q + +TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEAVDDGEKL-DADVLRESIHKDAPSFEQQGTDSEILETGIKVVDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + +S+ VGER RE R+ + + Sbjct: 142 LKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGRDLYNEMTESGVI 201 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LTA+T+AEYF K G NVLL +D+I RF + E++ Sbjct: 202 DKTALVYGQMNEPPGARLRVGLTALTMAEYFRDKEGQNVLLFIDNIFRFTQAGSEVSALL 261 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 262 GRMPSAVGYQPNLATEMGALQERI--TSTSTGSITSVQAVYVPADDLTDPAPATTFAHLD 319 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 VL+R +A G YP VDPL S SR+ + +E K+ ++ R++E +DI I Sbjct: 320 ATTVLSRQIASLGIYPAVDPLDSTSRILEPEIVGNEHYKIARETQKVLQRYKELQDIIAI 379 Query: 393 GG 394 G Sbjct: 380 LG 381 >gi|50954454|ref|YP_061742.1| F0F1 ATP synthase subunit beta [Leifsonia xyli subsp. xyli str. CTCB07] gi|81826688|sp|Q6AG58|ATPB_LEIXX RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|50950936|gb|AAT88637.1| ATP synthase, beta chain [Leifsonia xyli subsp. xyli str. CTCB07] Length = 487 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 89/273 (32%), Positives = 151/273 (55%), Gaps = 9/273 (3%) Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PP+ + + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 131 IHRQPPSFDHLESKTQLFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMVQRVAQ 190 Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D +S+ VGER RE + I + K+ +V DE P R L+A+T+AE Sbjct: 191 DHGGVSVFAGVGERTREGNDLIHEMEEAGVFDKTALVFGQMDEPPGTRLRVALSALTMAE 250 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 251 YFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGLLQERITSTRG 310 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL S SR+ D Sbjct: 311 H--SITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASKGLYPAVDPLTSTSRILD 368 Query: 363 KAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + AD ++ +++ ++ + +E ++I I G Sbjct: 369 PRYLGADHYRVATTVKQILQKNKELQEIIAILG 401 >gi|15677764|ref|NP_274928.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis MC58] gi|81857552|sp|Q9JXQ2|ATPB_NEIMB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|7227192|gb|AAF42263.1| ATP synthase F1, beta subunit [Neisseria meningitidis MC58] gi|308390032|gb|ADO32352.1| ATP synthase beta chain [Neisseria meningitidis alpha710] gi|316985556|gb|EFV64503.1| ATP synthase F1, beta subunit [Neisseria meningitidis H44/76] gi|325129472|gb|EGC52302.1| ATP synthase F1, beta subunit [Neisseria meningitidis OX99.30304] gi|325139587|gb|EGC62127.1| ATP synthase F1, beta subunit [Neisseria meningitidis CU385] gi|325200985|gb|ADY96440.1| ATP synthase F1, beta subunit [Neisseria meningitidis H44/76] gi|325201427|gb|ADY96881.1| ATP synthase F1, beta subunit [Neisseria meningitidis M01-240149] gi|325207408|gb|ADZ02860.1| ATP synthase F1, beta subunit [Neisseria meningitidis NZ-05/33] Length = 465 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|254788504|ref|YP_003075933.1| F0F1 ATP synthase subunit beta [Teredinibacter turnerae T7901] gi|259585454|sp|C5BKJ5|ATPB_TERTT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|237687362|gb|ACR14626.1| ATP synthase F1, beta subunit [Teredinibacter turnerae T7901] Length = 470 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 158/304 (51%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG PID +G+ + M I K P +TG++VID+ P G Sbjct: 84 GRIMDVLGNPIDECGPIGEQE-RMPIHRKAPAYDELSSTTDLLETGVKVIDLVCPFAKGG 142 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DN 213 ++G+F G+G+GK+ + + + +S+ VGER RE +F + +N Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIALEHSGLSVFAGVGERTREGNDFYHEMQESGVVNVEN 202 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K+S V V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 203 FKESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 262 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 320 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A +G YP +DPL S SR D A+ + + ++ R++E +DI Sbjct: 321 LDSTVVLSRDIAAKGIYPAIDPLDSTSRQLDPLVIGAEHYDVARGVQSVLQRYKELKDII 380 Query: 391 LIGG 394 I G Sbjct: 381 AILG 384 >gi|119350455|gb|ABL63178.1| AtpB [Bracteacoccus giganteus] Length = 383 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + ++ I + P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVDNMGPVNNQE-TLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 E LGD+ K +V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 148 EKNLGDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDANKQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGVLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W EK ++ + R+ Sbjct: 264 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQNVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|89574025|gb|ABD77238.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Oryctolagus cuniculus] Length = 422 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 57 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 115 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 116 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 174 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 175 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 234 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 235 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 292 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 293 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 352 Query: 389 IRLIGG 394 I I G Sbjct: 353 IIAILG 358 >gi|31980648|ref|NP_058054.2| ATP synthase subunit beta, mitochondrial precursor [Mus musculus] gi|20455479|sp|P56480|ATPB_MOUSE RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|12845667|dbj|BAB26846.1| unnamed protein product [Mus musculus] gi|26350917|dbj|BAC39095.1| unnamed protein product [Mus musculus] gi|28302366|gb|AAH46616.1| ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit [Mus musculus] gi|74139742|dbj|BAE31720.1| unnamed protein product [Mus musculus] gi|74141200|dbj|BAE35911.1| unnamed protein product [Mus musculus] gi|74151428|dbj|BAE38829.1| unnamed protein product [Mus musculus] gi|74151806|dbj|BAE29691.1| unnamed protein product [Mus musculus] gi|74185118|dbj|BAE39161.1| unnamed protein product [Mus musculus] gi|74189002|dbj|BAE39267.1| unnamed protein product [Mus musculus] gi|74195964|dbj|BAE30540.1| unnamed protein product [Mus musculus] gi|74198581|dbj|BAE39769.1| unnamed protein product [Mus musculus] gi|74213430|dbj|BAE35529.1| unnamed protein product [Mus musculus] gi|74216691|dbj|BAE37764.1| unnamed protein product [Mus musculus] gi|74216945|dbj|BAE26587.1| unnamed protein product [Mus musculus] gi|74219911|dbj|BAE40537.1| unnamed protein product [Mus musculus] gi|74223230|dbj|BAE40749.1| unnamed protein product [Mus musculus] gi|74223633|dbj|BAE28692.1| unnamed protein product [Mus musculus] gi|74227679|dbj|BAE35689.1| unnamed protein product [Mus musculus] gi|148692595|gb|EDL24542.1| ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit [Mus musculus] Length = 529 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|319893054|ref|YP_004149929.1| ATP synthase beta chain [Staphylococcus pseudintermedius HKU10-03] gi|317162750|gb|ADV06293.1| ATP synthase beta chain [Staphylococcus pseudintermedius HKU10-03] gi|323463891|gb|ADX76044.1| ATP synthase F1, beta subunit [Staphylococcus pseudintermedius ED99] Length = 470 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 96/302 (31%), Positives = 159/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GRV N LG+ ID ++ + + + + + P + E + +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGEHIDLEEPIDAA-VRRDPIHREAPKFDELSTEVEILETGIKVVDLLAPY 145 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + E + Sbjct: 146 IKGGKIGLFGGAGVGKTVLIQELINNIAQEHGGISVFAGVGERTREGNDLYYEMKDSGVI 205 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 AKTAMVFGQMNEPPGARMRVALSGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALL 265 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +E+ +L ERI + KG++T++ +V V D++ DP + + LD Sbjct: 266 GRMPSAVGYQPTLATEMGQLQERI--TSTNKGSVTSIQAVFVPADDYTDPAPATAFAHLD 323 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 L R L+E G YP VDPLAS SR + E V+ + + ++ E +DI I Sbjct: 324 ATTNLERKLSEMGIYPAVDPLASTSRALEPTIVGQEHYDVARQVQSTLQKYRELQDIIAI 383 Query: 393 GG 394 G Sbjct: 384 LG 385 >gi|4519324|dbj|BAA75577.1| ATP synthase beta-subunit [Astrephomene perforata] Length = 376 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ D ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVIFDD-TLPIHRTAPTFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPACVN 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK + SS+ ++ R++E Sbjct: 266 TFTHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSVASSVKKVLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|28940|emb|CAA27246.1| unnamed protein product [Homo sapiens] gi|219654|dbj|BAA00016.1| F1 beta subunit [Homo sapiens] gi|355039|prf||1202298A ATPase beta,F1 Length = 539 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 151 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 209 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 210 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 268 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V ++ P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 269 KDATSKVALVYGQMNQPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 328 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 329 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 386 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 387 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 446 Query: 389 IRLIGG 394 I I G Sbjct: 447 IIAILG 452 >gi|34500020|gb|AAQ73592.1| ATP synthase beta subunit [Actinobacillus delphinicola] Length = 444 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 153/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + I P ++ + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGQPIDQKGPIG-AEEEWSIHRAAPSYEDQANSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSKVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAGGYQPTLAEEMGGLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G P VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGILPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGMLQRYKELKDIIAILG 376 >gi|34500014|gb|AAQ73589.1| ATP synthase beta subunit [Bisgaard Taxon 17] Length = 444 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G + + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDERGEIG-AEENWSIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTESNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G + Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMR 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFTHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|77462850|ref|YP_352354.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides 2.4.1] gi|126461743|ref|YP_001042857.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides ATCC 17029] gi|221638720|ref|YP_002524982.1| F0F1 ATP synthase subunit beta [Rhodobacter sphaeroides KD131] gi|332557741|ref|ZP_08412063.1| F0F1 ATP synthase subunit beta' [Rhodobacter sphaeroides WS8N] gi|118573736|sp|Q3J431|ATPB1_RHOS4 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|190358214|sp|A3PIB9|ATPB1_RHOS1 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|77387268|gb|ABA78453.1| F1-ATP synthase beta subunit [Rhodobacter sphaeroides 2.4.1] gi|126103407|gb|ABN76085.1| ATP synthase F1, beta subunit [Rhodobacter sphaeroides ATCC 17029] gi|221159501|gb|ACM00481.1| ATP synthase subunit beta [Rhodobacter sphaeroides KD131] gi|332275453|gb|EGJ20768.1| F0F1 ATP synthase subunit beta' [Rhodobacter sphaeroides WS8N] Length = 475 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID LG+ + I P + + TGI+VID+ P Sbjct: 85 ATLGRILNVIGEPIDEKGDLGEAS-TRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAPYS 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG--- 211 G +IG+F G+G+GK+ L+ + KV + + VGER RE + + + Sbjct: 144 KGGKIGLFGGAGVGKTVLIMELI--NNIAKVHSGYSVFAGVGERTREGNDLYHEMIESGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 DNL +S V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 202 IKIDNLSESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP Sbjct: 262 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGSITSVQAIYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R+++E G YP VDPL S SR+ D +E V+ ++ ++ R++ Sbjct: 320 ATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQIVGEEHYNVARAVQGILQRYK 379 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 380 SLQDIIAILG 389 >gi|313504227|gb|ADR63863.1| ATP synthase B subunit [Parallela transversalis] Length = 399 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D +G + S+ I P ++ F+TGI+V+D+ P G Sbjct: 48 GRIFNVLGEPVDNLGPVGNQE-SLPIHRPAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 106 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 107 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 166 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + E Sbjct: 167 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAE 224 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 225 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 282 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W EK ++ + R++E Sbjct: 283 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQNVKKTLQRYKEL 341 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 342 QDIIAILG 349 >gi|325677814|ref|ZP_08157456.1| ATP synthase F1, beta subunit [Ruminococcus albus 8] gi|324110368|gb|EGC04542.1| ATP synthase F1, beta subunit [Ruminococcus albus 8] Length = 468 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/297 (33%), Positives = 157/297 (52%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LG+P+D + + EI + P + + +TGI+VID+ P G + Sbjct: 90 RMFNLLGEPVDNLPAPENAE-RWEIHREPPTYEEQTAANEILETGIKVIDLIAPYLKGGK 148 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ + IS+ VGER RE + + E + K+V+ Sbjct: 149 IGLFGGAGVGKTVLIQELINNVANQHGGISVFTGVGERTREGNDLYWEMKESGVIDKTVL 208 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 209 VYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 268 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + LD VL Sbjct: 269 AVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 326 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +RS+A G +P VDPL S SR+ +E V+ + ++ R+ E +DI I G Sbjct: 327 SRSIASLGIFPAVDPLESTSRILTPEIVGNEHYQVARQVQSILQRYVELQDIIAIMG 383 >gi|218188864|gb|EEC71291.1| hypothetical protein OsI_03305 [Oryza sativa Indica Group] Length = 625 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 165/314 (52%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+PID KGD++ + I + P + + ++ TGI+V+D+ Sbjct: 165 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 219 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 220 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 278 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 279 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 338 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 339 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 396 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 397 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 456 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 457 QNYKNLQDIIAILG 470 >gi|119350457|gb|ABL63179.1| AtpB [Bracteacoccus minor] Length = 392 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + ++ I + P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNMGPVNNQE-TLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 LGD+ K +V +E P R LTA+T+AEYF + +VL +D+I RF + E Sbjct: 158 LGDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDANKQDVLFFIDNIFRFVQAGAE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGVLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W EK ++ + R++E Sbjct: 274 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQNVKKTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|54310642|ref|YP_131662.1| F0F1 ATP synthase subunit beta [Photobacterium profundum SS9] gi|81828648|sp|Q6LLG8|ATPB1_PHOPR RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|46915085|emb|CAG21860.1| Putative AtpD, ATP synthase F1, beta subunit [Photobacterium profundum SS9] Length = 468 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 158/304 (51%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G+ + I + P + +TG++VID+ P G Sbjct: 87 GRIMNVLGEPIDECGEIGE-EQRYAIHREAPSYEEQSNETSLLETGVKVIDLICPFAKGG 145 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLK- 215 +IG+F G+G+GK+ + + +S+ VGER RE +F +++ NL+ Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNLEN 205 Query: 216 ----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 206 PSESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 265 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 266 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAH 323 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP +DPL S SR+ D E + + L+ R++E +DI Sbjct: 324 LDATVVLSRQIASLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSLLQRYKELKDII 383 Query: 391 LIGG 394 I G Sbjct: 384 AILG 387 >gi|126661087|ref|ZP_01732169.1| F0F1 ATP synthase subunit beta [Cyanothece sp. CCY0110] gi|126617631|gb|EAZ88418.1| F0F1 ATP synthase subunit beta [Cyanothece sp. CCY0110] Length = 473 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 12/317 (3%) Query: 81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNR 138 ++ G V + G+ ++ GRV N G+ IDG +++ + + + +VP P R Sbjct: 70 LARGSRVINLGKPLQVPVGKQTLGRVFNVFGETIDGKEAITEANWRS--IHQVPLPLQQR 127 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---V 195 TGI+ IDI TP+ G + G+F G+G+GK+ L++ + ISL + Sbjct: 128 STTSDILATGIKAIDILTPIEQGGKAGLFGGAGVGKTVLITEMIHNMVSQYQGISLFCGI 187 Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVL 253 GER RE E + L ++++ DE P R A+T+AEYF + +VL Sbjct: 188 GERNREAEELYREMQDAGVLDNTIMLFGQMDEPPGARFRVGHAALTMAEYFRDELKQDVL 247 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 L++D+I RF + +E++ G LP GY ++ +EL L ERI + G+IT+V +V Sbjct: 248 LLMDNIFRFIQAGQEVSGLMGRLPSRVGYQPTLGTELAELEERI--TNTATGSITSVQAV 305 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KL 372 V D+ DP A L IVL+R A EG YP +DPL S S++ + + Sbjct: 306 YVPADDFTDPAAVQTFGHLSASIVLSRKRASEGLYPAIDPLQSGSKMLSPTIVGERHYNI 365 Query: 373 VSSLTHLIHRFEETRDI 389 + + +E+ +DI Sbjct: 366 AQGIKSTLASYEDLKDI 382 >gi|300669387|dbj|BAJ11492.1| ATP synthase beta-subunit [Chloromonas pseudoplatyrhyncha] Length = 376 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + S+ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAEASLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKDGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APSVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 321 RYKELQDIIAILG 333 >gi|258690452|gb|ACV87988.1| ATP synthase beta subunit [Aphrocallistes vastus] Length = 426 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 155/305 (50%), Gaps = 15/305 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G PID +G + I + P + + +TGI+V+D+ P G Sbjct: 63 LGRIINVIGDPIDERGPIGS-EHEANIHQEAPEFIEMSVAQNILETGIKVVDLLAPYARG 121 Query: 162 QRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVREFIEDY-------LG 211 +IG+F G+G+GK+ L+ S + + VGER RE + + L Sbjct: 122 GKIGLFGGAGVGKTVLIMELINNIASAHGGYSVFAGVGERTREGNDLYHEMIATKVISLD 181 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT + +AE+F K G +VLL +D+I RF + E++ Sbjct: 182 DDKSKVSLVYGQMNEPPGARARVCLTGLAVAEHFRDKEGQDVLLFIDNIFRFTQAGSEVS 241 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 242 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 299 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R +AE G YP VDPL S SR+ D A+ + + ++ ++ +DI Sbjct: 300 HLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPHIVGAEHYAIARGVQKVLQNYKSLQDI 359 Query: 390 RLIGG 394 I G Sbjct: 360 IAILG 364 >gi|71370888|gb|AAZ30673.1| ATP synthase beta subunit [Microciona prolifera] Length = 427 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 93/307 (30%), Positives = 159/307 (51%), Gaps = 21/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID +G+ ++ I + P ++ ++ TGI+V+D+ P G Sbjct: 65 GRIINVIGEPIDERGPIGE-EMQAAIHADAPEFVDMNVKQEILVTGIKVVDLLAPYAKGG 123 Query: 163 RIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREVREFIEDY------- 209 +IG+F G+G+GK+ ++ A C + + VGER RE + + Sbjct: 124 KIGLFGGAGVGKTVVIMELINNVAKAHGGC---SVFAGVGERTREGNDLYHEMIQGGVIS 180 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 181 LKDDSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSE 240 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P+ ++ +++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 241 VSALLGRIPLLWATSQTLATDMGTMQERI--TTTQKGSITSVQAVFVPADDLTDPAPATT 298 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETR 387 + LD VL+R+++E G YP VDPL S SR+ D A+ + + ++ + + Sbjct: 299 FAHLDATTVLSRAISELGIYPAVDPLDSTSRIMDPNIVGAEHYNVARGVQKILQDYRSLQ 358 Query: 388 DIRLIGG 394 DI I G Sbjct: 359 DIIAILG 365 >gi|66048345|ref|YP_238186.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae B728a] gi|237801681|ref|ZP_04590142.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|257485616|ref|ZP_05639657.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289649121|ref|ZP_06480464.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi str. 2250] gi|289677529|ref|ZP_06498419.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae FF5] gi|298489521|ref|ZP_07007530.1| ATP synthase beta chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302185823|ref|ZP_07262496.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. syringae 642] gi|75499956|sp|Q4ZL24|ATPB_PSEU2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|63259052|gb|AAY40148.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. syringae B728a] gi|298155948|gb|EFH97059.1| ATP synthase beta chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320321670|gb|EFW77769.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea str. B076] gi|320331127|gb|EFW87098.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] gi|330881925|gb|EGH16074.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] gi|330952352|gb|EGH52612.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae Cit 7] gi|330961486|gb|EGH61746.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. maculicola str. ES4326] gi|330976386|gb|EGH76443.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330987002|gb|EGH85105.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011905|gb|EGH91961.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] gi|331024540|gb|EGI04596.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] Length = 459 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+++ LG PID G ++ E I P + +TGI+VID+ Sbjct: 82 ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 136 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 137 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 256 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 257 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 314 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + +++ R++E +DI Sbjct: 315 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 374 Query: 391 LIGG 394 I G Sbjct: 375 AILG 378 >gi|315497308|ref|YP_004086112.1| ATP synthase f1, beta subunit [Asticcacaulis excentricus CB 48] gi|315415320|gb|ADU11961.1| ATP synthase F1, beta subunit [Asticcacaulis excentricus CB 48] Length = 481 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + + I + P ++ + TGI+VID+ P Sbjct: 92 ATLGRIMNVIGEPIDEAGPIETTYFN-PIHADAPAFEDQATSAEILVTGIKVIDLICPYA 150 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE---- 207 G +IG+F G+G+GK+ L++ A++ V VGER RE E IE Sbjct: 151 KGGKIGLFGGAGVGKTVTIQELINNIAKAYGGYSVFAG-VGERTREGNDLYHEMIESKVN 209 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 ++ G + +V +E P R LT + AEYF +G +VL +D+I RF + Sbjct: 210 EHGGGGNSRCTLVYGQMNEPPGARARVALTGLAQAEYFRDQEGKDVLFFVDNIFRFTQAG 269 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ +L ERI + +KG+IT+V +V V D+ DP Sbjct: 270 SEVSALLGRIPSAVGYQPTLATEMGKLQERI--TSTKKGSITSVQAVYVPADDLTDPAPA 327 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEE 385 + + LD VL+RS+AE+G YP VDPL S SR+ D +E V++ + ++ +++ Sbjct: 328 TSFAHLDATTVLSRSIAEQGIYPAVDPLDSTSRILDPRIVGEEHYQVATRVQEILQQYKA 387 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 388 LKDIIAILG 396 >gi|156095717|ref|XP_001613893.1| ATP synthase beta chain, mitochondrial precursor [Plasmodium vivax SaI-1] gi|148802767|gb|EDL44166.1| ATP synthase beta chain, mitochondrial precursor, putative [Plasmodium vivax] Length = 547 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/316 (32%), Positives = 162/316 (51%), Gaps = 31/316 (9%) Query: 103 GRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDIFTPLC 159 GR++N +G+PID GD K M + + PP Q E TGI+V+D+ P Sbjct: 153 GRIMNVIGEPIDECGDIKCTK----MLPIHREPPLFTDQSTEPALLITGIKVVDLIAPYA 208 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGD--- 212 G +IG+F G+G+GK T+L M ++ K + + VGER RE + + + Sbjct: 209 KGGKIGLFGGAGVGK-TVLIMELINNVAKKHGGYSVFAGVGERTREGNDLYHEMITTGVI 267 Query: 213 ------------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 N K+ +V +E P R LT +T+AEYF + +VLL +D+I Sbjct: 268 KKKKIGNGQYDFNGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEENQDVLLFVDNI 327 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ ++L L ERI + + G+IT+V +V V D+ Sbjct: 328 YRFTQAGSEVSALLGRIPSAVGYQPTLSTDLGALQERI--TTTKNGSITSVQAVYVPADD 385 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 DP + S LD VL+RS+AE G YP VDPL S SR L A++ ++ ++ Sbjct: 386 LTDPAPATTFSHLDATTVLSRSIAELGIYPAVDPLDSTSRMLTPDIVGAEQYEVARNVQQ 445 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 446 ILQDYKSLQDIIAILG 461 >gi|160895869|ref|YP_001561451.1| F0F1 ATP synthase subunit beta [Delftia acidovorans SPH-1] gi|226740187|sp|A9BPU7|ATPB_DELAS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|160361453|gb|ABX33066.1| ATP synthase F1, beta subunit [Delftia acidovorans SPH-1] Length = 469 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 19/309 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID + + L+ I K P ++ +TGI+VID+ +P Sbjct: 83 ATLGRIMDVLGNPIDERGPVDQA-LTAPIHRKAPAYDELSPSQELLETGIKVIDLISPFA 141 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD--- 212 G ++G+F G+G+GK+ L++ A+ V VGER RE +F + + D Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELINNIAKGHGGLSVFAG-VGERTREGNDFYHE-MSDAGV 199 Query: 213 ------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 N K +V +E P R LT +T+AE F +G +VL +D+I R+ + Sbjct: 200 VNQESLNDSKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGKDVLFFVDNIYRYTLAG 259 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP Sbjct: 260 TEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPA 317 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD +VL+R +A G YP VDPL S SR D +E K+ + + R++E Sbjct: 318 TTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYKVAREVQGTLQRYKE 377 Query: 386 TRDIRLIGG 394 RDI I G Sbjct: 378 LRDIIAILG 386 >gi|313894311|ref|ZP_07827876.1| ATP synthase F1, beta subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313441135|gb|EFR59562.1| ATP synthase F1, beta subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 474 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D D + D I P + + +TGI+V+D+ P G Sbjct: 92 LGRIFNVLGETVDHDPAPVAADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + + S VGER RE + + + K+ Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D +E ++ + ++ ++++ +DI I G Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGEEHYEVARGVQEVLQKYKDLQDIIAILG 388 >gi|264676472|ref|YP_003276378.1| ATP synthase F1 subunit beta [Comamonas testosteroni CNB-2] gi|299531206|ref|ZP_07044617.1| F0F1 ATP synthase subunit beta [Comamonas testosteroni S44] gi|262206984|gb|ACY31082.1| ATP synthase F1, beta subunit [Comamonas testosteroni CNB-2] gi|298720789|gb|EFI61735.1| F0F1 ATP synthase subunit beta [Comamonas testosteroni S44] Length = 469 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 105/342 (30%), Positives = 172/342 (50%), Gaps = 22/342 (6%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G +V + G P GR+++ LG PID + + L+ Sbjct: 51 VVRTIALGSSDGLKRGLMVTNTGNPITVPVGKATLGRIMDVLGNPIDERGPVDQ-TLTAA 109 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 110 IHRKAPAYDELSPSQELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 169 Query: 184 SDCFDKVIISLVGERGREVREFI----------EDYLGDNLKKSVVVVATSDESPILRKM 233 + V VGER RE +F ++ LG++ K +V +E P R Sbjct: 170 AHSGLSVFAG-VGERTREGNDFYHEMSDAGVVNQENLGES--KVAMVYGQMNEPPGNRLR 226 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 LT +T+AE F +G +VL +D+I R+ + E++ G +P A GY ++ E+ +L Sbjct: 227 VALTGLTMAESFRDEGKDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKL 286 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 ERI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDP Sbjct: 287 QERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDP 344 Query: 354 LASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L S SR D +E K+ + + R++E RDI I G Sbjct: 345 LDSTSRQLDPQVVGEEHYKVARQVQGTLQRYKELRDIIAILG 386 >gi|261187936|ref|XP_002620385.1| ATP synthase F1 beta subunit [Ajellomyces dermatitidis SLH14081] gi|239593396|gb|EEQ75977.1| ATP synthase F1 beta subunit [Ajellomyces dermatitidis SLH14081] gi|239614983|gb|EEQ91970.1| ATP synthase F1 beta subunit [Ajellomyces dermatitidis ER-3] gi|327357191|gb|EGE86048.1| ATP synthase subunit beta [Ajellomyces dermatitidis ATCC 18188] Length = 522 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 156/305 (51%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + KG I ++ P + + + TGI+V+D+ P G Sbjct: 134 LGRIMNVTGDPIDERGPI-KGTKMAPIHAEAPAYVEQATSAEILVTGIKVVDLLAPYARG 192 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 193 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 251 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 252 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 311 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 312 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 369 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D DE V++ + ++ ++ +DI Sbjct: 370 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGDEHYAVATRVQQMLQEYKSLQDI 429 Query: 390 RLIGG 394 I G Sbjct: 430 IAILG 434 >gi|166362833|ref|YP_001655106.1| F0F1 ATP synthase subunit beta [Microcystis aeruginosa NIES-843] gi|190358681|sp|B0JFM7|ATPB_MICAN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166085206|dbj|BAF99913.1| ATP synthase beta subunit [Microcystis aeruginosa NIES-843] Length = 482 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 106/324 (32%), Positives = 166/324 (51%), Gaps = 18/324 (5%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D+V + C GR+ N LG+P+D + + S I P ++ + Sbjct: 79 DIVDTGAAISVPVGKCTLGRIFNVLGEPVDEKGPVNVTETS-PIHRPAPKLVDLEVTPTV 137 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGRE 201 F+TGI+VID+ TP G +IG+F G+G+GK+ ++ + +S+ G ER RE Sbjct: 138 FETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTRE 197 Query: 202 ----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDN 251 E IE + DN + S +V +E P R L+A+T+AEYF SK D Sbjct: 198 GNDLYNEMIESKVINADNPEDSKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVSKQD- 256 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 VLL +D+I RF + E++ G +P A GY ++ +++ L ERI + ++G+IT++ Sbjct: 257 VLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQ 314 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370 +V V D+ DP + + LDG VL+R LA +G YP VDPL S S + DE Sbjct: 315 AVYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQADIVGDEHY 374 Query: 371 KLVSSLTHLIHRFEETRDIRLIGG 394 ++ + R++E +DI I G Sbjct: 375 GTARAVQSTLQRYKELQDIIAILG 398 >gi|29829423|ref|NP_824057.1| F0F1 ATP synthase subunit beta [Streptomyces avermitilis MA-4680] gi|81838405|sp|Q82J84|ATPB_STRAW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|29606530|dbj|BAC70592.1| putative F-type proton-transporting ATPase beta chain [Streptomyces avermitilis MA-4680] Length = 478 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 176/328 (53%), Gaps = 19/328 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ D+ S I K P + + F+TG++VID+ TP G Sbjct: 101 GKVFNTLGEVLNVDEKYDGERWS--IHRKAPRFDELESKTEMFETGVKVIDLLTPYVKGG 158 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + IE+ + D+ + K+ Sbjct: 159 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEE-MSDSGVIDKT 217 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G + Sbjct: 218 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 277 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD Sbjct: 278 PSAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATT 335 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R ++E+G YP VDPL S SR+ D + A D + ++ ++++ +DI I Sbjct: 336 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYDAAMRVKTVLQKYKDLQDIIAI--- 392 Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 393 -LGIDELGEEDKLVVHRARRVERFLSQN 419 >gi|74198645|dbj|BAE39797.1| unnamed protein product [Mus musculus] Length = 529 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|282896620|ref|ZP_06304635.1| ATP synthase F1, beta subunit [Raphidiopsis brookii D9] gi|281198490|gb|EFA73376.1| ATP synthase F1, beta subunit [Raphidiopsis brookii D9] Length = 482 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + ++ I + P + + F+TGI+V+D+ TP Sbjct: 95 ATLGRIFNVLGEPVDNQGPVNNEE-TLPIHRESPKLTDLETKPSVFETGIKVVDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210 G +IG+F G+G+GK+ ++ + +S+ VGER RE E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVIN 213 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +NL +S +V +E P R L+ +T+AEYF +VLL +D+I RF + Sbjct: 214 KENLNESKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + + E + S+ + R++E Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPSIVGKEHYDIARSVQATLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|71370926|gb|AAZ30692.1| ATP synthase beta subunit [Nereis vexillosa] Length = 388 Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I ++ P + ++ +TGI+V+D+ P G Sbjct: 64 LGRIINVIGEPIDERGPV-NARTTAPIHAEAPEFVEMSVEQEILETGIKVVDLLAPYAKG 122 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISL 181 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 182 KDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDIEGQDVLLFIDNIFRFTQAGSEV 241 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 242 SALLGRIPSAVGYQPTLATDMGAMQERI--TTTRKGSITSVQAIYVPADDLTDPAPATTF 299 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D A+ + + ++ ++ +D Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGAEHYGVARGVQKILQDYKSLQD 359 Query: 389 IRLIGG 394 I I G Sbjct: 360 IIAILG 365 >gi|330447620|ref|ZP_08311268.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491811|dbj|GAA05765.1| ATP synthase F1, beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 461 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 156/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG PID +G+ I P ++ + +TG++VID+ P G Sbjct: 87 GRIMNVLGTPIDECGEIGEKK-KYAIHRAAPSYEDQSNSSELLETGVKVIDLICPFAKGG 145 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKS 217 +IG+F G+G+GK+ L++ A++ V VGER RE +F E L K Sbjct: 146 KIGLFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKV 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G +P Sbjct: 205 SMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD +V Sbjct: 265 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDATVV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++A G YP +DPL S SR D E V+ + ++ R++E +DI I G Sbjct: 323 LSRNIAALGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQTVLQRYKELKDIIAILG 380 >gi|256390420|ref|YP_003111984.1| ATP synthase F1 subunit beta [Catenulispora acidiphila DSM 44928] gi|256356646|gb|ACU70143.1| ATP synthase F1, beta subunit [Catenulispora acidiphila DSM 44928] Length = 479 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 148/256 (57%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGRE 201 F TGI+V+D+ TP +G +IG+F G+G+GK+ L+ ++ + F V + + VGER RE Sbjct: 142 FTTGIKVVDLLTPYVNGGKIGLFGGAGVGKTVLIQELIYRVAANFGGVSVFAGVGERTRE 201 Query: 202 VREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + D +KK+ +V DE P R L+A+T+AEYF + +VLL +D+I Sbjct: 202 GNDLIAEMTETDVIKKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNI 261 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI ++ +IT+V ++ V D+ Sbjct: 262 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTKGH--SITSVQAIYVPADD 319 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTH 378 DP + + LD VL+R + ++G YP VDPL S SR+ D + S + + + + Sbjct: 320 ITDPAPHTTFTHLDATTVLSRPITQKGIYPAVDPLDSTSRILDPRYISREHYECATRIKA 379 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 380 ILQKYKDLQDIIAILG 395 >gi|213401052|gb|ACJ47174.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Zootermopsis angusticollis] gi|213401054|gb|ACJ47175.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Zootermopsis nevadensis] Length = 311 Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 93/272 (34%), Positives = 146/272 (53%), Gaps = 20/272 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG +E + + PP+ QR+ E+ GI+VID+ P G Sbjct: 20 GRIFNVVGELIDECGPL-KGKCDLEPIHREPPSFTEQRIQEEVLVMGIKVIDLLAPYLKG 78 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 79 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYHEMITSNVIN 136 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF K +VL +D+I RF + Sbjct: 137 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDKENQDVLFFVDNIFRFTQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 197 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTSGSITSVQAIYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 S LD VL+R +AE G YP VDPL S S+ Sbjct: 255 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQ 286 >gi|325921269|ref|ZP_08183129.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas gardneri ATCC 19865] gi|325548236|gb|EGD19230.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas gardneri ATCC 19865] Length = 468 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRAAPSYEDQSSSTELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|21956140|dbj|BAC06431.1| ATP synthase beta-subunit [Gonium multicoccum] Length = 376 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVVVSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVES 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 LGD+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 QLGDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|311743983|ref|ZP_07717789.1| ATP synthase F1 sector beta subunit [Aeromicrobium marinum DSM 15272] gi|311313113|gb|EFQ83024.1| ATP synthase F1 sector beta subunit [Aeromicrobium marinum DSM 15272] Length = 484 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 147/273 (53%), Gaps = 8/273 (2%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--S 184 I +K P + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ M AR Sbjct: 129 IHAKAPAFDQLESKTEMFQTGIKVIDLLTPYVLGGKIGLFGGAGVGKTVLIQEMIARVAR 188 Query: 185 DCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D + + VGER RE + I E L ++ +V DE P R L+A+T+AE Sbjct: 189 DHGGVSVFAGVGERTREGNDLIAEMEEAGVLGQTALVFGQMDEPPGARLRVALSALTMAE 248 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 249 YFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTRG 308 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD LNR +A G YP VDPL S SR+ D Sbjct: 309 H--SITSLQAIYVPADDYTDPAPATTFAHLDATTELNREIASMGIYPAVDPLTSTSRILD 366 Query: 363 KAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + S D + + ++ R +E +DI I G Sbjct: 367 PRYISHDHYTTANRVKSILQRNKELQDIIAILG 399 >gi|218197235|gb|EEC79662.1| hypothetical protein OsI_20905 [Oryza sativa Indica Group] Length = 538 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 163/306 (53%), Gaps = 27/306 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N +G+PID KGD++ + I + P + + ++ TGI+V+D+ P Sbjct: 149 GRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPY 203 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED-- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 204 QRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGV 262 Query: 209 -YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF Sbjct: 263 IKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQ 322 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 323 ANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPA 380 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R ++E G YP VDPL S SR L+ D + ++ + Sbjct: 381 PATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVLQNY 440 Query: 384 EETRDI 389 + +DI Sbjct: 441 KNLQDI 446 >gi|303319229|ref|XP_003069614.1| ATP synthase beta chain, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|111606563|gb|ABH10645.1| ATP synthase beta chain [Coccidioides posadasii] gi|240109300|gb|EER27469.1| ATP synthase beta chain, mitochondrial precursor, putative [Coccidioides posadasii C735 delta SOWgp] gi|320040970|gb|EFW22903.1| ATP synthase subunit beta [Coccidioides posadasii str. Silveira] Length = 521 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 156/305 (51%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + KG I ++ P + + + TGI+V+D+ P G Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARG 190 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGVMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 367 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D DE ++ + + +I ++ +DI Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGDEHYQVATRVQQMIQEYKSLQDI 427 Query: 390 RLIGG 394 I G Sbjct: 428 IAILG 432 >gi|313760420|dbj|BAJ41240.1| ATP synthase beta subunit [Mesocricetus auratus] Length = 529 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|158338428|ref|YP_001519605.1| F0F1 ATP synthase subunit beta [Acaryochloris marina MBIC11017] gi|158308669|gb|ABW30286.1| ATP synthase F1, beta subunit [Acaryochloris marina MBIC11017] Length = 484 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +G D + I P + + F+TGI+VID+ TP Sbjct: 94 ATLGRIFNVLGEPVDNQGDVGT-DETFPIHRPAPKLTDLETKPSVFETGIKVIDLLTPYR 152 Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVREFIEDYL------ 210 G +IG+F G+G+GK+ ++ ++ + VGER RE + + + Sbjct: 153 RGGKIGLFGGAGVGKTVIMMELINNIATNHGGVSVFGGVGERTREGNDLYNEMMESGVIN 212 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DNL S + + +E P R L+A+T+AEYF +VLL +D+I RF + Sbjct: 213 KDNLNDSKIALCYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 272 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 273 EVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 330 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + +DE + ++ + R++E Sbjct: 331 TFAHLDGTTVLSRGLASKGIYPAVDPLDSASTMLQPGIVSDEHYETARAVQSTLQRYKEL 390 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 391 QDIIAILG 398 >gi|109066521|ref|XP_001091520.1| PREDICTED: ATP synthase subunit beta, mitochondrial [Macaca mulatta] Length = 529 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 159/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P D + + I ++ P M ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPFDERGPIKTKQFAA-IHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLTTDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|62318463|dbj|BAD94439.1| beta subunit of F1F0-ATP synthase [Acidithiobacillus ferrooxidans] Length = 468 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR++N LG+P+DG + D + + + PA + + +TGI+VID+ P G Sbjct: 91 GRIMNVLGEPVDGKGPVQTQD--RQAIHRPAPAFDELAASTEVLETGIKVIDLVCPFAKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + S+ VGER RE +F + L K Sbjct: 149 GKVGLFGGAGVGKTVFMMEMIRNIAIEHTGYSVCAGVGERTREGNDFYHEMTDSGVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R A LT +T+A F +G ++L+ +D+I R+ + E++ G +P Sbjct: 209 ALVNGQMNEPPRNRLRAGLTGLTMAASFRDEGRDILMFIDNIFRYTLAGTEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT+V +V V D DP + + LD +V Sbjct: 269 SAVGYQPTLAEEMGQLQERI--TSTKVGSITSVQAVYVPADYLTDPSPATTFAHLDATVV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP +DPL S SR D E V+ S + ++E +DI I G Sbjct: 327 LSRQIAELGIYPALDPLDSFSRQLDPQIVGQEHYDVARSCQKTLQPYKELQDIIAILG 384 >gi|1374715|gb|AAB02288.1| ATP synthase beta subunit [Rattus norvegicus] Length = 475 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 87 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 204 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 205 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 265 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 323 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|584797|sp|P37399|ATPBM_DAUCA RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|18322|emb|CAA42844.1| ATP synthase b subunit [Daucus carota] Length = 547 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 95/302 (31%), Positives = 158/302 (52%), Gaps = 13/302 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID + K D + I + P +++ ++ TGI+V+D+ P G Sbjct: 162 GRIINVIGEPIDHRGEI-KTDQYLPIHREAPTFVDQATEQQILVTGIKVVDLLAPYQKGG 220 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLK 215 +IG+F G +GK+ L+ + + + VGER RE +E +E LGD Sbjct: 221 KIGLFGGDWVGKTVLIMELINNVAKAHAVFAGVGERTREGNDLYKEMMESGVIKLGDQQA 280 Query: 216 KS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 +S +V +E P R LT +T+AE+F ++G++VLL +D RF + E++ Sbjct: 281 ESKCALVYGQMNEPPGSRARVGLTGLTVAEHFRDAEGEDVLLFVDKRFRFTQANSEVSAL 340 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP + + L Sbjct: 341 LGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHL 398 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 D VL+R ++E G YP VDPL S SR+ + + ++ ++ +DI I Sbjct: 399 DATTVLSRQISELGIYPAVDPLDSTSRMLTPESGEEHYNTARGVQKVLQNYKNLQDIIAI 458 Query: 393 GG 394 G Sbjct: 459 LG 460 >gi|163784733|ref|ZP_02179542.1| hypothetical protein HG1285_01231 [Hydrogenivirga sp. 128-5-R1-1] gi|159879998|gb|EDP73693.1| hypothetical protein HG1285_01231 [Hydrogenivirga sp. 128-5-R1-1] Length = 477 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 162/311 (52%), Gaps = 11/311 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G +I GR+ N +G+PID D + + I P + + F+TGI+ Sbjct: 85 GPLQIPVGKAVLGRIFNVVGQPID-DAGPVEAEEKWPIFRPAPSFEEQSTKVEIFETGIK 143 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----ARSDCFDKVIISLVGERGREVRE-F 205 VID+ P G ++G+F G+G+GK+ L+ A+ V++ VGER RE + + Sbjct: 144 VIDLLVPFIKGGKVGLFGGAGVGKTVLMQELIHNIAKFHSGYSVVVG-VGERTREGNDLW 202 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +E L + +V +E P +R T +T+AEYF + +VL+ +D+I RF Sbjct: 203 MEMKESGVLPYTAMVYGQMNEPPGVRFRVAQTGLTMAEYFRDVEKQDVLIFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++T G LP A GY ++ +++ + ERI + G+IT++ +V V D+ DP Sbjct: 263 AGAEVSTLLGRLPSAVGYQPTLGTDVGEVQERIASTVN--GSITSIQAVYVPADDITDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383 S+ + LD IVL R LAE G YP +DPL S S+ + +E V+ + ++ R+ Sbjct: 321 PASIFAHLDATIVLQRRLAELGIYPAIDPLESTSKALAPEYVGEEHYYVAREVQRILQRY 380 Query: 384 EETRDIRLIGG 394 +E ++I I G Sbjct: 381 KELQEIIAILG 391 >gi|23503597|dbj|BAC20395.1| ATP synthase beta-subunit [Chloromonas macrostellata] gi|23503609|dbj|BAC20401.1| ATP synthase beta-subunit [Chloromonas rosae] Length = 376 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K D ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKADTALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|166713524|ref|ZP_02244731.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzicola BLS256] Length = 468 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRSAPSYEDQSSSTELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|119350463|gb|ABL63182.1| AtpB [Carteria obtusa] Length = 392 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 162/311 (52%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + I K P ++ F+TGI+V+D+ P Sbjct: 38 LGRIFNVLGEPVD---NLGPVNAEEKLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYR 94 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 95 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 154 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 155 EKNLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 212 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ +DP Sbjct: 213 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLSDPAP 270 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R+ Sbjct: 271 STTFTHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSARSVKKTLQRY 329 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 330 KELQDIIAILG 340 >gi|21230029|ref|NP_635946.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769977|ref|YP_244739.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv. campestris str. 8004] gi|81304070|sp|Q4UQF4|ATPB_XANC8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81860399|sp|Q8PCZ5|ATPB_XANCP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21111549|gb|AAM39870.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575309|gb|AAY50719.1| ATP synthase beta chain [Xanthomonas campestris pv. campestris str. 8004] Length = 468 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRAAPSYEDQSSSTELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|329118580|ref|ZP_08247284.1| ATP synthase F1 sector beta subunit [Neisseria bacilliformis ATCC BAA-1200] gi|327465315|gb|EGF11596.1| ATP synthase F1 sector beta subunit [Neisseria bacilliformis ATCC BAA-1200] Length = 465 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LGKP+D ++ + I + P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGKPVDEAGAV-DSKHTRSIHQEAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|289628231|ref|ZP_06461185.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330870058|gb|EGH04767.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 459 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+++ LG PID G ++ E I P + +TGI+VID+ Sbjct: 82 ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 136 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 137 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 256 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 257 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 314 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + +++ R++E +DI Sbjct: 315 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 374 Query: 391 LIGG 394 I G Sbjct: 375 AILG 378 >gi|28872698|ref|NP_795317.1| ATP synthase F1 subunit beta [Pseudomonas syringae pv. tomato str. DC3000] gi|213968459|ref|ZP_03396602.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato T1] gi|301384254|ref|ZP_07232672.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato Max13] gi|302063895|ref|ZP_07255436.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato K40] gi|302131979|ref|ZP_07257969.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. tomato NCPPB 1108] gi|81728859|sp|Q87TT4|ATPB_PSESM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|28855954|gb|AAO59012.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato str. DC3000] gi|213926747|gb|EEB60299.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. tomato T1] gi|330876336|gb|EGH10485.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330964198|gb|EGH64458.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. actinidiae str. M302091] gi|331017744|gb|EGH97800.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 459 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+++ LG PID G ++ E I P + +TGI+VID+ Sbjct: 82 ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 136 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 137 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 256 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 257 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 314 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + +++ R++E +DI Sbjct: 315 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 374 Query: 391 LIGG 394 I G Sbjct: 375 AILG 378 >gi|323144391|ref|ZP_08078999.1| ATP synthase F1, beta subunit [Succinatimonas hippei YIT 12066] gi|322415844|gb|EFY06570.1| ATP synthase F1, beta subunit [Succinatimonas hippei YIT 12066] Length = 472 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 158/298 (53%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+P+D + + + + I + P + + +TGI+VID+ P G Sbjct: 98 GRIMNVLGQPVDEAGPINEKERWV-IHREAPTYAEQSSTTEVLETGIKVIDLICPFAKGG 156 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKS 217 ++G+F G+G+GK+ L++ A + V VGER RE +F + + K Sbjct: 157 KVGLFGGAGVGKTVNMMELINNIATAHSGLSVFTG-VGERTREGNDFYHEMQEAKVIDKV 215 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 ++ +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 216 SMIYGQMNEPPGNRLRVALTGLTVAEKFRDEGLDVLLFIDNIYRYTLAGTEVSALLGRMP 275 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +KG+IT+V +V V D+ DP + + LD IV Sbjct: 276 SAVGYQPTLAEEMGVLQERI--ASTKKGSITSVQAVYVPADDLTDPSPATTFAHLDATIV 333 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D + D ++ + ++ R++E +DI I G Sbjct: 334 LSRQIASLGIYPAVDPLDSTSRQLDPSIVGKDHYEVARGVQTVLQRYKELKDIIAILG 391 >gi|118498208|ref|YP_899258.1| F0F1 ATP synthase subunit beta [Francisella tularensis subsp. novicida U112] gi|194324392|ref|ZP_03058165.1| ATP synthase F1, beta subunit [Francisella tularensis subsp. novicida FTE] gi|208780235|ref|ZP_03247577.1| ATP synthase F1, beta subunit [Francisella novicida FTG] gi|254373552|ref|ZP_04989039.1| ATP synthase subunit B [Francisella tularensis subsp. novicida GA99-3549] gi|166201705|sp|A0Q8D9|ATPB_FRATN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118424114|gb|ABK90504.1| ATP synthase, F1 sector, subunit beta [Francisella novicida U112] gi|151571277|gb|EDN36931.1| ATP synthase subunit B [Francisella novicida GA99-3549] gi|194321457|gb|EDX18942.1| ATP synthase F1, beta subunit [Francisella tularensis subsp. novicida FTE] gi|208743884|gb|EDZ90186.1| ATP synthase F1, beta subunit [Francisella novicida FTG] gi|332678943|gb|AEE88072.1| ATP synthase beta chain [Francisella cf. novicida Fx1] Length = 458 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 12/300 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N LG+PID + + + + PPA + + +TGI+V+D+ P Sbjct: 83 LGRIMNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAK 140 Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L Sbjct: 141 GGKVGLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLD 199 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R L+ +TIAE F + +VL+ +D+I R+ + E++ G Sbjct: 200 KVSLVYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGR 259 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 260 MPSAVGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDAT 317 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 IVL+R +AE G YP VDPL S SR D E + ++ ++ R++E +DI I G Sbjct: 318 IVLSRQIAELGIYPAVDPLDSTSRQLDPLVVGQEHYETARAVQKVLQRYKELKDIIAILG 377 >gi|4519312|dbj|BAA75571.1| ATP synthase beta-subunit [Gonium octonarium] Length = 376 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVTFSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVER 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 LGD+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 QLGDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|307594193|ref|YP_003900510.1| H(+)-transporting two-sector ATPase [Vulcanisaeta distributa DSM 14429] gi|307549394|gb|ADN49459.1| H(+)-transporting two-sector ATPase [Vulcanisaeta distributa DSM 14429] Length = 476 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 168/320 (52%), Gaps = 16/320 (5%) Query: 84 GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G V +GR R+ S GRV++ G+P DG L + ++I + R+ E Sbjct: 76 GSTVRFYGRTLRLPVSEDLLGRVLDGKGQPRDGL-PLPPAEEYLDINGEPLNPYAREYPE 134 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVG 196 + +TG+ VID + GQ++ +F+G+G+ + L + AR +I + +G Sbjct: 135 EPIETGVSVIDGLNTMVRGQKLPIFSGTGLPHNMLAAQVARQATVRGHEEEFAIIFAAMG 194 Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLL 254 + E F+ ++ + +V+V PI R + P TA+TIAEY + D +VL+ Sbjct: 195 LKSEEALFFLNEFRRTGALRRLVMVLNLASDPIAERILTPRTALTIAEYLAWYRDYHVLV 254 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 IL +T +A ++RE++++ GELP RGYP ++++ + ER G ++ +KG+IT + Sbjct: 255 ILTDMTNYAEALRELSSSKGELPGRRGYPGYMYTDFATIYERTGRAKGKKGSITQFPILT 314 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA----WSADEK 370 + D+ PI D I +G +VL+R+L +G YPP D + S+SRL A + D+ Sbjct: 315 MPHDDITHPIPDLTGYITEGQLVLSRTLWGKGIYPPFDVIMSLSRLMKDAVGEGKTRDDH 374 Query: 371 KLVSSLTHLIHRFEETRDIR 390 K V++ LI + D+R Sbjct: 375 KYVAN--QLIAAYSRALDVR 392 >gi|18415911|ref|NP_568204.1| ATP synthase beta chain 2, mitochondrial [Arabidopsis thaliana] gi|26391492|sp|P83484|ATPBN_ARATH RecName: Full=ATP synthase subunit beta-2, mitochondrial; Flags: Precursor gi|13548327|emb|CAC35874.1| H+-transporting ATP synthase beta chain (mitochondrial)-like protein [Arabidopsis thaliana] gi|15293123|gb|AAK93672.1| unknown protein [Arabidopsis thaliana] gi|19310683|gb|AAL85072.1| unknown protein [Arabidopsis thaliana] gi|21281109|gb|AAM44896.1| unknown protein [Arabidopsis thaliana] gi|26452188|dbj|BAC43182.1| putative H+-transporting ATP synthase beta chain (mitochondrial) [Arabidopsis thaliana] gi|332003955|gb|AED91338.1| ATP synthase subunit beta-2 [Arabidopsis thaliana] Length = 556 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 18/275 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID + K + + I P ++ ++ TGI+V+D+ P Sbjct: 164 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 222 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 223 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 281 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LG+ +S +V +E P R LT +T+AEYF ++G +VLL +D+I RF + Sbjct: 282 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 341 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ S+L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 342 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 399 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 400 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 434 >gi|325915883|ref|ZP_08178179.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas vesicatoria ATCC 35937] gi|325537850|gb|EGD09550.1| ATP synthase F1 subcomplex beta subunit [Xanthomonas vesicatoria ATCC 35937] Length = 468 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRTAPSYEDQSSSTELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D + + + +++E Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGTEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|225572597|gb|ACN93884.1| AtpD [Gallibacterium anatis] Length = 452 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ I P + + +T I+VID+ P G Sbjct: 82 LGRIMNVLGEPIDERGPIGE-KARWSIHRAAPSYEEQANSTELLETDIKVIDLVCPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPPPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|288961601|ref|YP_003451911.1| F-type H+-transporting ATPase beta chain [Azospirillum sp. B510] gi|288913881|dbj|BAI75367.1| F-type H+-transporting ATPase beta chain [Azospirillum sp. B510] Length = 487 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 148/293 (50%), Gaps = 8/293 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+I+ +G D L G I PP R +TGI+VID+ PL G Sbjct: 108 GRLIDVMGSARDDGPELPDGTPRAPIHRAPPPLARRSPRRDPMETGIKVIDLLAPLARGG 167 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 + +F G+G+GK+ L+ R IS+ +GER RE +E E+ L ++ Sbjct: 168 KAAMFGGAGVGKTVLVMELIRKMVERHSGISVFAGIGERSREGQELWEEMKRSGVLDRTA 227 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LTA+TIAE+F + +VLL++D++ RF + E++ G LP Sbjct: 228 LVFGQMNEPPGARWRVGLTALTIAEHFRDEARRDVLLLMDNVFRFVQAGAEVSGLLGRLP 287 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ SE+ L ER+ + +TA+ +V V D+ DP + S LD IV Sbjct: 288 SRVGYQPTLASEIAELEERV--ASTAGAVVTAIQAVYVPADDFTDPAVAELFSHLDSSIV 345 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R++A EG YP VDPL+S S L D + +L + I + E +D+ Sbjct: 346 LSRAMAAEGLYPAVDPLSSTSSLLDPLVVGEAHYRLAEEVRGTIAHYRELQDV 398 >gi|83649673|ref|YP_438108.1| F0F1 ATP synthase subunit beta [Hahella chejuensis KCTC 2396] gi|118573541|sp|Q2S6P1|ATPB_HAHCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|83637716|gb|ABC33683.1| ATP synthase F1, beta subunit [Hahella chejuensis KCTC 2396] Length = 459 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 156/299 (52%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + M I P ++ +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDEKGPIGEEE-RMPIHRTAPGYADQSSSRDLLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A+ V VGER RE +F + L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKEHSGLSVFAG-VGERTREGNDFYYEMEESKVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G + Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRM 260 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + S LD + Sbjct: 261 PSAVGYQPTLAEEMGVLQERI--TSTKVGSITSVQAVYVPADDLTDPSPATTFSHLDATV 318 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +A +G YP +DPL S SR D E V+ + ++ R++E +DI I G Sbjct: 319 VLSRDIAAKGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKDIIAILG 377 >gi|17939849|emb|CAC81058.1| mitochondrial F1 ATP synthase beta subunit [Arabidopsis thaliana] Length = 589 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 95/271 (35%), Positives = 148/271 (54%), Gaps = 16/271 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID + K + + I P ++ ++ TGI+V+D+ P G Sbjct: 200 GRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQRGG 258 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLGD 212 +IG+F G+G+GK+ L+ + + + VGER RE RE IE LG+ Sbjct: 259 KIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGE 318 Query: 213 NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 +S +V +E P R LT +T+AEYF ++G +VLL +D+I RF + E+ Sbjct: 319 KQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQANSEV 378 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ S+L L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 379 SALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 436 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + LD VL+R ++E G YP VDPL S SR+ Sbjct: 437 AHLDATTVLSRQISELGIYPAVDPLDSTSRM 467 >gi|91777092|ref|YP_546848.1| F0F1 ATP synthase subunit beta [Methylobacillus flagellatus KT] gi|118573696|sp|Q1GXN0|ATPB_METFK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|91711079|gb|ABE51007.1| ATP synthase F1, beta subunit [Methylobacillus flagellatus KT] Length = 465 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 105/333 (31%), Positives = 168/333 (50%), Gaps = 11/333 (3%) Query: 69 IVYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + +S G V + G + ++ GR+++ LG+PID + + D Sbjct: 55 VVRTIAMGSSDGLSRGMKVKNTGSQIQVPVGHGTLGRIMDVLGRPIDEAGPI-EADEKRS 113 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 114 IHQKAPTFEELSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 173 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242 V VGER RE +F + N L K +V +E P R LT +T+A Sbjct: 174 QHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMA 232 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E F +G ++L +D+I R+ + E++ G +P A GY ++ E+ RL ERI + Sbjct: 233 ERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TST 290 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + G+IT++ +V V D+ DP + LD +VL+R +A G YP VDPL S SR D Sbjct: 291 KVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLD 350 Query: 363 KAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +E V+ ++ + R++E RDI I G Sbjct: 351 PQIVGEEHYSVARAVQSTLQRYKELRDIIAILG 383 >gi|28198344|ref|NP_778658.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa Temecula1] gi|71901248|ref|ZP_00683348.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1] gi|182680985|ref|YP_001829145.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa M23] gi|81839548|sp|Q87E90|ATPB_XYLFT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740693|sp|B2I877|ATPB_XYLF2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|28056414|gb|AAO28307.1| ATP synthase beta chain [Xylella fastidiosa Temecula1] gi|71728981|gb|EAO31112.1| ATP synthase F1, beta subunit [Xylella fastidiosa Ann-1] gi|182631095|gb|ACB91871.1| ATP synthase F1, beta subunit [Xylella fastidiosa M23] gi|307579453|gb|ADN63422.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa subsp. fastidiosa GB514] Length = 466 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID + D EI P ++ + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDEAGPITYTD-QWEIHRNAPSYEDQASTTELLETGIKVIDLMCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF S KG +VLL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGKGKDVLLFIDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + G+IT++ +V V D+ DP + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTANGSITSIQAVYVPADDLTDPSPATTFG 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD + L+RS+A G YP VDPL S SR D +E + + ++++ +DI Sbjct: 319 HLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTTQRVQQTLQKYKDLKDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|291389459|ref|XP_002711130.1| PREDICTED: mitochondrial ATP synthase beta subunit [Oryctolagus cuniculus] Length = 528 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|89574027|gb|ABD77239.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Tadarida brasiliensis] Length = 429 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 77 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 135 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 136 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 194 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 195 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 254 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 255 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 312 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 313 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 372 Query: 389 IRLIGG 394 I I G Sbjct: 373 IIAILG 378 >gi|91178106|gb|ABE27288.1| mitochondrial F-ATPase beta subunit [Candida dubliniensis] Length = 337 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 162/306 (52%), Gaps = 20/306 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID D + I ++ P + + + +TGI+V+D+ P G Sbjct: 20 GRIINVVGEPID-DRGPIECKEKKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARGG 78 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 79 KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINLE 137 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 138 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 195 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 196 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 253 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + + + + ++ +D Sbjct: 254 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATGVQQTLQAYKSLQD 313 Query: 389 IRLIGG 394 I I G Sbjct: 314 IIAILG 319 >gi|110680693|ref|YP_683700.1| F0F1 ATP synthase subunit beta [Roseobacter denitrificans OCh 114] gi|118573740|sp|Q162S9|ATPB_ROSDO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|109456809|gb|ABG33014.1| ATP synthase F1, beta subunit [Roseobacter denitrificans OCh 114] Length = 474 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 20/319 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G I GR++N +G+PID + D + I + P + + +TGI+ Sbjct: 75 GPISIPVGNATLGRIMNVVGEPIDEKGPVAT-DETRSIHQEAPAFAEQSTSSEVLETGIK 133 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE---- 201 VID+ P G +IG+F G+G+GK+ L+ + KV + + VGER RE Sbjct: 134 VIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDL 191 Query: 202 VREFIED--YLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256 E IE + DNL +S V V +E P R LT +T+AE F + G +VL + Sbjct: 192 YHEMIESSVIVPDNLTESKVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFV 251 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ + ERI + + G+IT+V +V V Sbjct: 252 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKAGSITSVQAVYVP 309 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R+++E G YP VDPL S SRL D +E V+ Sbjct: 310 ADDLTDPAPATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPQVLGEEHYNVARD 369 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ R++ +DI I G Sbjct: 370 VQGILQRYKSLQDIIAILG 388 >gi|254382328|ref|ZP_04997688.1| ATP synthase subunit B [Streptomyces sp. Mg1] gi|194341233|gb|EDX22199.1| ATP synthase subunit B [Streptomyces sp. Mg1] Length = 480 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 100/328 (30%), Positives = 175/328 (53%), Gaps = 17/328 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ + I K P + + F+TG++VID+ TP G Sbjct: 101 GKVFNTLGEVLNYPEENANVTERWPIHRKAPRFDELESKTEMFETGVKVIDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + IE+ + D+ + K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEE-MADSGVIDKT 219 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L +T+AEYF + +VL +D+I R+ + E++T G + Sbjct: 220 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRYTQAGSEVSTLLGRM 279 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD Sbjct: 280 PSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATT 337 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R ++E+G YP VDPL S SR+ D + +AD + ++ ++++ +DI I Sbjct: 338 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAADHYATAMRVKGILQKYKDLQDIIAI--- 394 Query: 396 RPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 395 -LGIDELGEEDKLVVHRARRVERFLSQN 421 >gi|330970308|gb|EGH70374.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. aceris str. M302273PT] Length = 443 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+++ LG PID G ++ E I P + +TGI+VID+ Sbjct: 82 ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 136 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 137 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 256 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 257 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 314 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + +++ R++E +DI Sbjct: 315 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 374 Query: 391 LIGG 394 I G Sbjct: 375 AILG 378 >gi|15837745|ref|NP_298433.1| F0F1 ATP synthase subunit beta [Xylella fastidiosa 9a5c] gi|81623765|sp|Q9PE85|ATPB_XYLFA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|9106107|gb|AAF83953.1|AE003950_3 ATP synthase, beta chain [Xylella fastidiosa 9a5c] Length = 466 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 154/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID + D EI P ++ + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDEAGPITYTD-QWEIHRNAPSYEDQASTTELLETGIKVIDLMCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF S KG +VLL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDSSGKGKDVLLFIDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + G+IT++ +V V D+ DP + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTANGSITSIQAVYVPADDLTDPSPATTFG 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD + L+RS+A G YP VDPL S SR D +E + + ++++ +DI Sbjct: 319 HLDSTVTLSRSIAALGIYPAVDPLDSSSRQMDPLIIGEEHYNTTQRVQQTLQKYKDLKDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|126176547|ref|YP_001052696.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS155] gi|153002861|ref|YP_001368542.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS185] gi|160877608|ref|YP_001556924.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS195] gi|217975448|ref|YP_002360199.1| F0F1 ATP synthase subunit beta [Shewanella baltica OS223] gi|304412687|ref|ZP_07394290.1| ATP synthase F1, beta subunit [Shewanella baltica OS183] gi|307305848|ref|ZP_07585594.1| ATP synthase F1, beta subunit [Shewanella baltica BA175] gi|166222413|sp|A3DAR4|ATPB_SHEB5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166222414|sp|A6WUJ0|ATPB_SHEB8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189081344|sp|A9KX06|ATPB_SHEB9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808163|sp|B8EDV0|ATPB_SHEB2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|125999752|gb|ABN63827.1| ATP synthase F1, beta subunit [Shewanella baltica OS155] gi|151367479|gb|ABS10479.1| ATP synthase F1, beta subunit [Shewanella baltica OS185] gi|160863130|gb|ABX51664.1| ATP synthase F1, beta subunit [Shewanella baltica OS195] gi|217500583|gb|ACK48776.1| ATP synthase F1, beta subunit [Shewanella baltica OS223] gi|304348897|gb|EFM13312.1| ATP synthase F1, beta subunit [Shewanella baltica OS183] gi|306911341|gb|EFN41767.1| ATP synthase F1, beta subunit [Shewanella baltica BA175] gi|315269806|gb|ADT96659.1| ATP synthase F1, beta subunit [Shewanella baltica OS678] Length = 463 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 158/301 (52%), Gaps = 10/301 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID +G+ + + I P ++ + +TGI+VID+ P Sbjct: 85 ATLGRIMNVLGEPIDEAGPIGEEERYV-IHRTAPSYEDQSSSTELLETGIKVIDLVCPFA 143 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + L Sbjct: 144 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYYEMKDSGVL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSG 274 K +V +E P R L+ +T+AE F +G +VLL +D+I R+ + E++ G Sbjct: 203 DKVAMVYGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 263 RMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDA 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 +VL+R +A G YP VDPL S SR D E + + + ++ R++E +DI I Sbjct: 321 TVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAIL 380 Query: 394 G 394 G Sbjct: 381 G 381 >gi|297806945|ref|XP_002871356.1| ATP synthase beta chain 1, mitochondrial [Arabidopsis lyrata subsp. lyrata] gi|297810985|ref|XP_002873376.1| ATP synthase beta chain 1, mitochondrial [Arabidopsis lyrata subsp. lyrata] gi|26391487|sp|P83483|ATPBM_ARATH RecName: Full=ATP synthase subunit beta-1, mitochondrial; Flags: Precursor gi|13548325|emb|CAC35872.1| H+-transporting ATP synthase beta chain (mitochondrial)-like protein [Arabidopsis thaliana] gi|15809909|gb|AAL06882.1| At5g08670 [Arabidopsis thaliana] gi|19347814|gb|AAL86357.1| unknown protein [Arabidopsis thaliana] gi|21360569|gb|AAM47481.1| At5g08670/At5g08670 [Arabidopsis thaliana] gi|21436349|gb|AAM51344.1| unknown protein [Arabidopsis thaliana] gi|26452103|dbj|BAC43141.1| putative H+-transporting ATP synthase beta chain (mitochondrial) [Arabidopsis thaliana] gi|297317193|gb|EFH47615.1| ATP synthase beta chain 1, mitochondrial [Arabidopsis lyrata subsp. lyrata] gi|297319213|gb|EFH49635.1| ATP synthase beta chain 1, mitochondrial [Arabidopsis lyrata subsp. lyrata] Length = 556 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 97/275 (35%), Positives = 150/275 (54%), Gaps = 18/275 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID + K + + I P ++ ++ TGI+V+D+ P Sbjct: 164 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 222 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 223 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 281 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LG+ +S +V +E P R LT +T+AEYF ++G +VLL +D+I RF + Sbjct: 282 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 341 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ S+L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 342 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 399 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 400 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 434 >gi|296117269|ref|ZP_06835860.1| F0F1 ATP synthase subunit beta [Gluconacetobacter hansenii ATCC 23769] gi|295976162|gb|EFG82949.1| F0F1 ATP synthase subunit beta [Gluconacetobacter hansenii ATCC 23769] Length = 493 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 103 GRVINALGKPIDGDDS-LGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N +G+PID L KG + + PA + Q TGI+V+D+ P Sbjct: 105 GRILNVIGEPIDDRGPVLAKGRSPIH---RSAPAFDEQAAATEILPTGIKVVDLLCPYLK 161 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL------- 210 G ++G+F G+G+GK+ ++ + +S+ VGER RE + + Sbjct: 162 GGKVGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYYEMQDAGVIKL 221 Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 GD+ + S V V +E P R L+ VT+AEYF +G +VL +D+I RF + Sbjct: 222 DGDSTEGSKVALVYGQMNEPPGARARVALSGVTVAEYFRDVEGQDVLFFVDNIFRFTQAG 281 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP Sbjct: 282 AEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPA 339 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VLNRS+AE G YP VDPL S SR D DE ++ + ++ ++ Sbjct: 340 ATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVGDEHYQVARDVQRILQTYKS 399 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 400 LQDIIAILG 408 >gi|294786386|ref|ZP_06751640.1| ATP synthase F1, beta subunit [Parascardovia denticolens F0305] gi|315225947|ref|ZP_07867735.1| ATP synthase F1 sector beta subunit [Parascardovia denticolens DSM 10105] gi|294485219|gb|EFG32853.1| ATP synthase F1, beta subunit [Parascardovia denticolens F0305] gi|315120079|gb|EFT83211.1| ATP synthase F1 sector beta subunit [Parascardovia denticolens DSM 10105] Length = 497 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 30/319 (9%) Query: 103 GRVINALGKPID---GDDSLG------------KGDLSMEIMSKVPPAMNRQRVEK---- 143 G V+ G PI+ G+ +LG + D +E+ K P R ++ Sbjct: 94 GAVVTDTGGPIEVPVGNVTLGHVFDVSGHILNKQDDEQIEVKEKWPIHRAAPRFDQLESK 153 Query: 144 --GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGER 198 F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + + +S+ VGER Sbjct: 154 TEMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGER 213 Query: 199 GREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256 RE + I E L K+ +V DE P R PLTA+T+AEYF + +VLL + Sbjct: 214 TREGNDLIGEMEEAGVLNKTALVFGQMDEPPGTRLRVPLTALTMAEYFRDVQNQDVLLFI 273 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++T G +P A GY ++ E+ L ERI + +IT++ ++ V Sbjct: 274 DNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGSLQERITSTRGH--SITSLQAIYVP 331 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375 D++ DP + + LD L+R +A +G YP VDPL+S SR+ D + + Sbjct: 332 ADDYTDPAPATTFAHLDATTELSRDIASKGIYPAVDPLSSTSRILDPRYVGQAHYDCANR 391 Query: 376 LTHLIHRFEETRD-IRLIG 393 + ++ R +E +D I LIG Sbjct: 392 VKAILQRNKELQDIIALIG 410 >gi|284999823|dbj|BAI67812.1| ATP synthase beta-subunit [Asterococcus superbus] Length = 376 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG K D ++ I P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NLGPVKTDQTLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R L+A+T+AEYF G +VL +D+I RF + Sbjct: 148 EKNLSDS--KVALVYGQMNEPPGARMRVALSALTMAEYFRDFNGQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + LD VL+R+LA +G YP VDPL S S + + W +K ++ + R+ Sbjct: 264 STTFVHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDKHYNCAQAVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|95928943|ref|ZP_01311688.1| ATP synthase F1, beta subunit [Desulfuromonas acetoxidans DSM 684] gi|95134844|gb|EAT16498.1| ATP synthase F1, beta subunit [Desulfuromonas acetoxidans DSM 684] Length = 482 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 9/292 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ + G PID + + PP R + F+TGI+VID+ TPL G + Sbjct: 97 RMFDVFGNPIDRKPP-AENLQWRSVHQPSPPLSQRSTEPEVFETGIKVIDVLTPLERGGK 155 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSVV 219 G+F G+G+GK+ LL+ + +SL +GER RE E D L + Sbjct: 156 TGLFGGAGVGKTVLLTEMIHNMVHQHEGVSLFCGIGERCREGEELYRDMQQAGVLDNMAM 215 Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 + +E P R A+T+AEYF + +VLL++D+I RF + EI+ G++P Sbjct: 216 IFGQMNEPPGSRFRVGHAALTMAEYFRDDEHRDVLLLIDNIFRFIQAGSEISGLMGQMPS 275 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 GY ++ +EL +L ERI + E G IT++ +V V D+ DP A S L +VL Sbjct: 276 RLGYQPTLSTELSQLQERI--ANTETGAITSIQAVYVPADDFTDPAAVHTFSHLSASVVL 333 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 +R A EG YP +DPL S S++A+ + ++ + + ++EE +DI Sbjct: 334 SRKRASEGLYPAIDPLQSNSKMANPSIVGHHHDAIARQVRQTLAQYEEMKDI 385 >gi|186521400|ref|NP_568203.2| ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism [Arabidopsis thaliana] gi|332003953|gb|AED91336.1| F-type H+-transporting ATPase subunit beta [Arabidopsis thaliana] Length = 556 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 162/310 (52%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID + K + + I P ++ ++ TGI+V+D+ P Sbjct: 164 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 222 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 223 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 281 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LG+ +S +V +E P R LT +T+AEYF ++G +VLL +D+I RF + Sbjct: 282 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 341 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ S+L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 342 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 399 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SR+ +E + ++ ++ Sbjct: 400 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYK 459 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 460 NLQDIIAILG 469 >gi|91178112|gb|ABE27291.1| mitochondrial F-ATPase beta subunit [Meyerozyma guilliermondii] Length = 337 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 164/306 (53%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I ++ P + + + +TGI+V+D+ P G Sbjct: 19 LGRIINVIGEPIDERGPI-ESKQKKPIHAEPPSFVEQSTSAEVLETGIKVVDLLAPYARG 77 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 78 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 135 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 136 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEV 195 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 196 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 253 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D + +E + S++ + ++ +D Sbjct: 254 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGEEHYSVASNVQQTLQAYKSLQD 313 Query: 389 IRLIGG 394 I I G Sbjct: 314 IIAILG 319 >gi|22326673|ref|NP_680155.1| ATP synthase beta chain, mitochondrial, putative [Arabidopsis thaliana] gi|75333362|sp|Q9C5A9|ATPBO_ARATH RecName: Full=ATP synthase subunit beta-3, mitochondrial; Flags: Precursor gi|13548326|emb|CAC35873.1| H+-transporting ATP synthase beta chain (mitochondrial)-like protein [Arabidopsis thaliana] gi|26450906|dbj|BAC42560.1| putative H+-transporting ATP synthase beta chain (mitochondrial) [Arabidopsis thaliana] gi|29028952|gb|AAO64855.1| At5g08680 [Arabidopsis thaliana] gi|332003954|gb|AED91337.1| ATP synthase subunit beta-3 [Arabidopsis thaliana] Length = 559 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 162/310 (52%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID + K + + I P ++ ++ TGI+V+D+ P Sbjct: 167 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 225 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 226 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 284 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LG+ +S +V +E P R LT +T+AEYF ++G +VLL +D+I RF + Sbjct: 285 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 344 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ S+L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 345 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 402 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SR+ +E + ++ ++ Sbjct: 403 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYK 462 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 463 NLQDIIAILG 472 >gi|294794509|ref|ZP_06759645.1| ATP synthase F1, beta subunit [Veillonella sp. 3_1_44] gi|294454839|gb|EFG23212.1| ATP synthase F1, beta subunit [Veillonella sp. 3_1_44] Length = 474 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D D + D I P + + +TGI+V+D+ P G Sbjct: 92 LGRIFNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + + S VGER RE + + + K+ Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D +E V+ + ++ ++ + +DI I G Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGEEHYAVARGVQEVLQKYRDLQDIIAILG 388 >gi|255067774|ref|ZP_05319629.1| ATP synthase F1, beta subunit [Neisseria sicca ATCC 29256] gi|255047985|gb|EET43449.1| ATP synthase F1, beta subunit [Neisseria sicca ATCC 29256] Length = 465 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 154/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + D I P + +TGI+VID+ P G Sbjct: 83 LGRIVDVLGTPVDEAGPIDT-DKHRAIHQTAPKFDELSATTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF S KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|269798588|ref|YP_003312488.1| ATP synthase F1 subunit beta [Veillonella parvula DSM 2008] gi|269095217|gb|ACZ25208.1| ATP synthase F1, beta subunit [Veillonella parvula DSM 2008] Length = 474 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D D + D I P + + +TGI+V+D+ P G Sbjct: 92 LGRIFNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + + S VGER RE + + + K+ Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D +E V+ + ++ ++ + +DI I G Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGEEHYAVARGVQEVLQKYRDLQDIIAILG 388 >gi|16127677|ref|NP_422241.1| F0F1 ATP synthase subunit beta [Caulobacter crescentus CB15] gi|221236496|ref|YP_002518933.1| F0F1 ATP synthase subunit beta [Caulobacter crescentus NA1000] gi|81856162|sp|Q9A2V9|ATPB_CAUCR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|13425165|gb|AAK25409.1| ATP synthase F1, beta subunit [Caulobacter crescentus CB15] gi|220965669|gb|ACL97025.1| ATP synthase beta chain [Caulobacter crescentus NA1000] Length = 539 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 97/321 (30%), Positives = 162/321 (50%), Gaps = 23/321 (7%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ GR++N +G+PID + + D+S I P + + TGI+VI Sbjct: 138 IRVPVGPGTLGRIMNVIGEPIDEQGPI-RSDISRTIHRDAPSFAEQTNTAEVLVTGIKVI 196 Query: 153 DIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK+ L++ A++ V+ VGER RE + + Sbjct: 197 DLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG-VGERTREGNDLYHE 255 Query: 209 YLGDNLK-------------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 + N+ + +V +E P R LT ++IAEYF +G +VLL Sbjct: 256 MIESNVNVDPKANNGSTEGSRCALVYGQMNEPPGARARVALTGLSIAEYFRDEEGKDVLL 315 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +E+ L ERI + KG+IT+V ++ Sbjct: 316 FVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERI--TSTNKGSITSVQAIY 373 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R +A + +P VDPL S SR+ D +E V+ Sbjct: 374 VPADDLTDPAPATSFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMDPLVIGEEHYTVA 433 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ +++ +DI I G Sbjct: 434 RRVQEVLQQYKALKDIIAILG 454 >gi|315604634|ref|ZP_07879697.1| ATP synthase F1 sector beta subunit [Actinomyces sp. oral taxon 180 str. F0310] gi|315313646|gb|EFU61700.1| ATP synthase F1 sector beta subunit [Actinomyces sp. oral taxon 180 str. F0310] Length = 482 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 150/273 (54%), Gaps = 9/273 (3%) Query: 129 MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PPA ++ K F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 127 IHRQPPAFDQLEARTKMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 186 Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D +S+ VGER RE + I E K+ +V DE P R LT +T+AE Sbjct: 187 DHGGVSVFAGVGERTREGNDLIGEMEEAGVFDKTALVFGQMDEPPGTRLRIALTGLTMAE 246 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ +L ERI + Sbjct: 247 YFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSA 304 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPLAS SR+ D Sbjct: 305 GGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIAAKGIYPAVDPLASSSRILD 364 Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 A E V++ + ++ + +E +DI I G Sbjct: 365 PALVGREHYDVATHVKAILQKNKELQDIIAILG 397 >gi|118488735|gb|ABK96178.1| unknown [Populus trichocarpa] Length = 420 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/279 (35%), Positives = 151/279 (54%), Gaps = 26/279 (9%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+ ID KGDL E I + P + + ++ TGI+V+D+ Sbjct: 27 ATLGRIINVIGEAIDE-----KGDLKTEHYLPIHREAPSFVEQATEQQVLVTGIKVVDLL 81 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 82 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 140 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 141 SGVIKLGDQQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 200 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 201 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 258 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 DP + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 259 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 297 >gi|71733339|ref|YP_277280.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. phaseolicola 1448A] gi|118573721|sp|Q48BG5|ATPB_PSE14 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71553892|gb|AAZ33103.1| ATP synthase F1, beta subunit [Pseudomonas syringae pv. phaseolicola 1448A] Length = 459 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+++ LG PID G ++ E I P + +TGI+VID+ Sbjct: 82 ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 136 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 137 CPFTKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 196 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ Sbjct: 197 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 256 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 257 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 314 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + +++ R++E +DI Sbjct: 315 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 374 Query: 391 LIGG 394 I G Sbjct: 375 AILG 378 >gi|74151565|dbj|BAE38888.1| unnamed protein product [Mus musculus] gi|74189077|dbj|BAE39301.1| unnamed protein product [Mus musculus] Length = 529 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGRMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|330890268|gb|EGH22929.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. mori str. 301020] Length = 459 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 94/300 (31%), Positives = 152/300 (50%), Gaps = 8/300 (2%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID + + I P + +TGI+VID+ P Sbjct: 82 ATLGRIMDVLGNPIDEAGPIATQE-RWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFA 140 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LK 215 G ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L Sbjct: 141 KGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLD 200 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ G Sbjct: 201 KVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGR 260 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD Sbjct: 261 MPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAHLDAT 318 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D E + +++ R++E +DI I G Sbjct: 319 VVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDIIAILG 378 >gi|330937325|gb|EGH41327.1| F0F1 ATP synthase subunit beta [Pseudomonas syringae pv. pisi str. 1704B] Length = 430 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+++ LG PID G ++ E I P + +TGI+VID+ Sbjct: 53 ATLGRIMDVLGNPIDE-----AGPIATEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 107 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 108 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 167 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ Sbjct: 168 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 227 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 228 LLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDPSPATTFAH 285 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + +++ R++E +DI Sbjct: 286 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 345 Query: 391 LIGG 394 I G Sbjct: 346 AILG 349 >gi|297157185|gb|ADI06897.1| F0F1 ATP synthase subunit beta [Streptomyces bingchenggensis BCW-1] Length = 484 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 155/293 (52%), Gaps = 8/293 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LGK ++ ++ + I K P + + F+TG++V+D+ TP G Sbjct: 105 GRVFNTLGKILNEPEAESEVTERWSIHRKAPAFDQLESKTEMFETGLKVVDLLTPYVKGG 164 Query: 163 RIGVFAGSGIGKSTLLS-MFARSDCFDK--VIISLVGERGREVREF-IEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L K+ Sbjct: 165 KIGLFGGAGVGKTVLIQEMIVRVAKLHEGVSVFAGVGERTREGNDLMVEMEEAGVLDKTA 224 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 225 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 284 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 285 SAVGYQPNLADEMGILQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 342 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389 L+R ++E+G YP VDPL S SR+ D + S D S + ++ ++++ +DI Sbjct: 343 LSRPISEKGIYPAVDPLDSTSRILDPRYISQDHYDCASRVKSILQKYKDLQDI 395 >gi|6729935|pdb|1MAB|B Chain B, Rat Liver F1-Atpase gi|93279423|pdb|2F43|B Chain B, Rat Liver F1-Atpase Length = 479 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 91 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 150 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 208 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 209 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 268 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 269 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 326 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 327 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 386 Query: 389 IRLIGG 394 I I G Sbjct: 387 IIAILG 392 >gi|23503633|dbj|BAC20413.1| ATP synthase beta-subunit [Chlorogonium elongatum] Length = 376 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + ++ I K P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NLGPVQQNQTLPIHRKAPLFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK + S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYATAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|83952825|ref|ZP_00961555.1| ATP synthase subunit B [Roseovarius nubinhibens ISM] gi|83835960|gb|EAP75259.1| ATP synthase subunit B [Roseovarius nubinhibens ISM] Length = 474 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + K + I + P + + TGI+V+D+ P Sbjct: 84 ATLGRILNVVGEPVDEGAPI-KATETRAIHQEAPEFQEQSTESEVLVTGIKVVDLLAPYA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESNV 200 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 201 INPDNLEESQVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + + G+IT+V +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKSGSITSVQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R+++E G YP VDPL S SRL D A +E V+ + ++ R++ Sbjct: 319 ATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPAIVGEEHYQVARDVQGILQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|298206869|ref|YP_003715048.1| ATP synthase subunit B [Croceibacter atlanticus HTCC2559] gi|83849503|gb|EAP87371.1| ATP synthase subunit B [Croceibacter atlanticus HTCC2559] Length = 501 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 106/336 (31%), Positives = 162/336 (48%), Gaps = 40/336 (11%) Query: 97 PSACWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P GR+ N +G PIDG + + K GD + I P + + TGI+VID+ Sbjct: 83 PIGDVYGRLFNVVGDPIDGMEDMPKTGDNGLPIHRNAPKFEDLSVSTEVLFTGIKVIDLI 142 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 143 EPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLES 202 Query: 209 YL---GDNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEY 244 + GD+ K+ V +E P R L+ +TIAEY Sbjct: 203 GIIKYGDDFMHSMEEGGWDLSKVDKTAMKDSKATFVFGQMNEPPGARARVALSGLTIAEY 262 Query: 245 F-----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 F +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI Sbjct: 263 FRDGAGDGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI-- 320 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + +KG+IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR Sbjct: 321 TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSR 380 Query: 360 LADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + +E + L+ R++E +DI I G Sbjct: 381 ILTADILGNEHYDCAQRVKELLQRYKELQDIIAILG 416 >gi|189183496|ref|YP_001937281.1| F0F1 ATP synthase subunit beta [Orientia tsutsugamushi str. Ikeda] gi|226740657|sp|B3CRK6|ATPB_ORITI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189180267|dbj|BAG40047.1| ATP synthase beta chain [Orientia tsutsugamushi str. Ikeda] Length = 478 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 162/318 (50%), Gaps = 20/318 (6%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 + ++ GR++N +G+PID LG K D +I P +N+ K TGI Sbjct: 85 QIKVPVGKSILGRILNVVGQPID---DLGPIKCDNFSQIHKDAPKFINQSTSRKILITGI 141 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFI 206 +VID+ TP G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 142 KVIDLLTPYISGGKIGLFGGAGVGKTVLIMEIINNVAKAYKGYTVFTGVGERTREGGDLY 201 Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILD 257 ++ +G N+ K +V +E P R LT +TIAE F + VLL +D Sbjct: 202 KEMVGSNIIDLNKLENSKVTLVFGQMNEPPGARARVALTGLTIAESFRDMNEGEVLLFID 261 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + EI+T G +P A GY ++ +++ L ERI + + G IT++ ++ V Sbjct: 262 NIFRFTQAGAEISTLLGRIPSAVGYQPTLATDIGSLQERI--TSTKFGAITSIQAIYVPA 319 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-L 376 D+ DP + + LD VL+R +AE G YP VDPL S S++ D E V++ + Sbjct: 320 DDLTDPAPVACFAHLDATTVLSRKIAELGIYPAVDPLNSSSQILDANVIGQEHYSVATKV 379 Query: 377 THLIHRFEETRDIRLIGG 394 ++ ++ +D+ I G Sbjct: 380 QEILQTYKSLQDVIAILG 397 >gi|23503625|dbj|BAC20409.1| ATP synthase beta-subunit [Carteria obtusa] Length = 376 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 162/311 (52%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + I K P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NLGPVNAEEKLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ +DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLSDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R+ Sbjct: 264 STTFTHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSARSVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|297734279|emb|CBI15526.3| unnamed protein product [Vitis vinifera] Length = 419 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 96/275 (34%), Positives = 152/275 (55%), Gaps = 18/275 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+PID + K D + I + P +++ ++ TGI+V+D+ P Sbjct: 27 ATLGRIINVIGEPIDERGDI-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDLLAPYQ 85 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 86 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 144 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LG+ +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF + Sbjct: 145 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 204 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 205 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 262 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 263 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 297 >gi|297565883|ref|YP_003684855.1| H(+)-transporting two-sector ATPase [Meiothermus silvanus DSM 9946] gi|296850332|gb|ADH63347.1| H(+)-transporting two-sector ATPase [Meiothermus silvanus DSM 9946] Length = 466 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 91/297 (30%), Positives = 158/297 (53%), Gaps = 16/297 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ S GR N +G+PIDG + + + I ++R++ E+ +TG+ ID Sbjct: 79 RLGVSKEMVGRAFNGIGRPIDGLPPV-VAEKRLPINGSPINPVSREKPEEFIQTGVSAID 137 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206 + L GQ++ +F+GSG+ + L + AR + F V+ + +G REV F+ Sbjct: 138 MNMTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLGQGEGF-AVVFAAMGITQREVSYFL 196 Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +++ L +SV+ + +D+ + R + P A+T AEY + + D +VL+IL +T + Sbjct: 197 QEFERTGALARSVLFLNKADDPTVERLLTPRMALTAAEYLAFEHDYHVLVILTDMTNYCE 256 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI E+P RGYP ++++L + ER G +KG++T + + + GD+ PI Sbjct: 257 ALREIGGAREEIPGRRGYPGYMYTDLASIYERAGVVHGKKGSVTQIPILSMPGDDITHPI 316 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSL 376 D I +G I + R LA++G YPP++ S+SRL + AD K+L L Sbjct: 317 PDLTGYITEGQIFIARELAQQGIYPPINVQPSLSRLMNNGIGKGKTRADHKELADQL 373 >gi|162146520|ref|YP_001600979.1| F0F1 ATP synthase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|209543481|ref|YP_002275710.1| F0F1 ATP synthase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|190358669|sp|A9H9A8|ATPB_GLUDA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|161785095|emb|CAP54639.1| ATP synthase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|209531158|gb|ACI51095.1| ATP synthase F1, beta subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 493 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/325 (30%), Positives = 164/325 (50%), Gaps = 18/325 (5%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 ++V G+ + GR++N +G+PID + K D I K P + + Sbjct: 87 EVVATGGQITVPVGPGTLGRILNVIGEPIDERGPV-KSDKRYPIHRKAPSFDEQAAATEI 145 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 TGI+V+D+ P G ++G+F G+G+GK+ ++ + +S+ VGER RE Sbjct: 146 LVTGIKVVDLLCPYLKGGKVGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTRE 205 Query: 202 VREFIEDY-------LGDNL---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGD 250 + + LG++ K +V +E P R L+ +++AEYF +G Sbjct: 206 GNDLYYEMQDAGVIKLGEDTTEGSKVALVYGQMNEPPGARARIALSGLSLAEYFRDEEGQ 265 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VL +D+I RF + E++ G +P A GY ++ +E+ L ERI + +KG+IT+V Sbjct: 266 DVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSV 323 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +V V D+ DP + + LD VLNRS+AE G YP VDPL S SR D +E Sbjct: 324 QAVYVPADDLTDPAPAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVGEEH 383 Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394 ++ + ++ ++ +DI I G Sbjct: 384 YQVARDVQRILQTYKSLQDIIAILG 408 >gi|258690460|gb|ACV87992.1| ATP synthase beta subunit [Geodia gibberosa] Length = 387 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 162/312 (51%), Gaps = 17/312 (5%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + PS GR++N +G+ +D + + D I + P ++ ++ TGI+V+D+ Sbjct: 58 VGPSTL--GRIMNVIGESVDERGPI-ESDTHASIHQEAPEFVDMSIDQEILVTGIKVVDL 114 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + + + VGER RE E IE Sbjct: 115 LAPYAKGGKIGLFGGAGVGKTVLIQELINNVSKAHGGYSVFAGVGERTREGNDLYHEMIE 174 Query: 208 D---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFA 263 L D+ K +V +E P R LT +T+AEYF K G +VLL +D+I RF Sbjct: 175 TGVISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDKEGKDVLLFIDNIFRFT 234 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ DP Sbjct: 235 QAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAVFVPADDLTDP 292 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 + + LD VL+R+++E G YP VDPL S SR+ D +E V+ + ++ Sbjct: 293 APATTFAHLDATTVLSRAISELGIYPAVDPLDSTSRIMDPNVVGEEHYNVARGVQKILQD 352 Query: 383 FEETRDIRLIGG 394 + +DI I G Sbjct: 353 YRSLQDIIAILG 364 >gi|163753474|ref|ZP_02160598.1| H(+)-transporting two-sector ATPase, beta subunit [Kordia algicida OT-1] gi|161327206|gb|EDP98531.1| H(+)-transporting two-sector ATPase, beta subunit [Kordia algicida OT-1] Length = 502 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 106/330 (32%), Positives = 160/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG L K GD + I + P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGLGELPKDGDNGLSIHREAPKFEDLSTSTEVLYTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 210 DDFMHSMEEGGWDLSKVDKNAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 270 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 387 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + L+ R++E +DI I G Sbjct: 388 LGDEHYNCAQRVKELLQRYKELQDIIAILG 417 >gi|7708278|emb|CAB90064.1| ATP synthase beta subunit [Dischidia lanceolata] Length = 457 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 158/310 (50%), Gaps = 18/310 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 + GR+ N LG+PID + S + K PPA + + F+TGI+V+D+ P Sbjct: 84 SLTLGRIFNVLGQPIDNLGPVATDTTSP--IHKSPPAFIQLETKLSIFETGIKVVDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG--- 211 G + G+F G+G+GK+ L+ + +S+ VGER RE + ++ Sbjct: 142 YRRGGKTGLFGGAGVGKTVLIMELINNIAKAHQGVSVFAGVGERTREGNDLYKEMKESGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 202 INEQNLSESKVALVYGQMNEPPGARMXVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 GSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + DE + + + R++ Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGDEHYETAQQVKQTLQRYK 379 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 380 EVQDIIAILG 389 >gi|224111564|ref|XP_002315902.1| mitochondrial beta subunit of F1 ATP synthase [Populus trichocarpa] gi|222864942|gb|EEF02073.1| mitochondrial beta subunit of F1 ATP synthase [Populus trichocarpa] Length = 559 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/279 (35%), Positives = 151/279 (54%), Gaps = 26/279 (9%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+ ID KGDL E I + P + + ++ TGI+V+D+ Sbjct: 166 ATLGRIINVIGEAIDE-----KGDLKTEHYLPIHREAPSFVEQATEQQVLVTGIKVVDLL 220 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 221 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 279 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 280 SGVIKLGDQQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 339 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 340 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 397 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 DP + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 398 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 436 >gi|302834718|ref|XP_002948921.1| hypothetical protein VOLCADRAFT_80433 [Volvox carteri f. nagariensis] gi|300265666|gb|EFJ49856.1| hypothetical protein VOLCADRAFT_80433 [Volvox carteri f. nagariensis] Length = 580 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + ++ I P + ++ TGI+V+D+ P G Sbjct: 125 GRIMNVIGEPVDEQGPIDAAEV-WSIHRDAPEFTEQSTEQEILVTGIKVVDLLAPYQRGG 183 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLGD 212 +IG+F G+G+GK+ L+ + + + VGER RE RE IE LGD Sbjct: 184 KIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGD 243 Query: 213 NL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 244 KRGESKCTLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFVDNIFRFTQANSEV 303 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + Sbjct: 304 SALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTF 361 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE G YP VDPL S SR+ + A+ + + ++ ++ +D Sbjct: 362 AHLDATTVLSRSIAELGIYPAVDPLDSTSRMLNPNIIGAEHYNVARGVQKVLQDYKNLQD 421 Query: 389 IRLIGG 394 I I G Sbjct: 422 IIAILG 427 >gi|258623013|ref|ZP_05718027.1| ATP synthase subunit B [Vibrio mimicus VM573] gi|258625009|ref|ZP_05719932.1| ATP synthase subunit B [Vibrio mimicus VM603] gi|262166762|ref|ZP_06034499.1| ATP synthase beta chain [Vibrio mimicus VM223] gi|262172741|ref|ZP_06040419.1| ATP synthase beta chain [Vibrio mimicus MB-451] gi|258582707|gb|EEW07533.1| ATP synthase subunit B [Vibrio mimicus VM603] gi|258584716|gb|EEW09451.1| ATP synthase subunit B [Vibrio mimicus VM573] gi|261893817|gb|EEY39803.1| ATP synthase beta chain [Vibrio mimicus MB-451] gi|262026478|gb|EEY45146.1| ATP synthase beta chain [Vibrio mimicus VM223] Length = 467 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G ++ I P + + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGDIGAEEV-YSIHRAAPSYEEQSSATELLETGVKVIDLICPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL--------G 211 +IG+F G+G+GK+ + + +S+ VGER RE +F + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQ 204 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PELSKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +KG+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E V+ + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|238927815|ref|ZP_04659575.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC 43531] gi|304437791|ref|ZP_07397741.1| ATP synthase F1 sector beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|238884362|gb|EEQ48000.1| H(+)-transporting two-sector ATPase [Selenomonas flueggei ATCC 43531] gi|304369239|gb|EFM22914.1| ATP synthase F1 sector beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 470 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 94/302 (31%), Positives = 158/302 (52%), Gaps = 10/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GRV N LG+ +D + G+ + + + P + Q +TGI+V+D+ P Sbjct: 87 ATLGRVFNVLGETVDHNPE-PVGNKEVWPIHRAAPKFDEQETSTQILETGIKVVDLIAPY 145 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L+ + + + + VGER RE + + + Sbjct: 146 SRGGKVGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAGVGERTREGNDLWSEMTESGVI 205 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 206 DKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQGQDVLLFIDNIFRFIQAGSEVSALL 265 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +++ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 266 GRMPSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAATFTHLD 323 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 VL+R +AE G YP VDPL S SR+ D E ++ + ++ +++E +DI I Sbjct: 324 ATTVLSRQIAELGIYPAVDPLDSTSRILDPHVIGQEHYEVARGVQAVLQKYKELQDIIAI 383 Query: 393 GG 394 G Sbjct: 384 LG 385 >gi|147905995|ref|NP_001083034.1| mitochondrial ATP synthase beta subunit [Danio rerio] gi|133778774|gb|AAI34216.1| Zgc:163069 protein [Danio rerio] Length = 524 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 159/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + D I + P + ++ TGI+V+D+ P G Sbjct: 138 LGRIMNVIGEPIDERGPIVT-DKFAAIHADAPEFVEMSVQQEILVTGIKVVDLLAPYAKG 196 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 197 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVISL 255 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 256 KDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 315 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 316 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 373 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E + + ++ ++ +D Sbjct: 374 AHLDATTVLSRAIAELGIYPAVDPLDSTSRILDPNIIGEEHYNIARGVQKILQDYKSLQD 433 Query: 389 IRLIGG 394 I I G Sbjct: 434 IIAILG 439 >gi|330469844|ref|YP_004407587.1| F0F1 ATP synthase subunit beta [Verrucosispora maris AB-18-032] gi|328812815|gb|AEB46987.1| F0F1 ATP synthase subunit beta [Verrucosispora maris AB-18-032] Length = 478 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 157/306 (51%), Gaps = 23/306 (7%) Query: 103 GRVINALGK--------PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 G V NA+G+ I DD G I K P + + + +TGI+VID+ Sbjct: 98 GHVFNAIGECLNLTEGETIQADDHWG-------IHRKAPAFADLEPKTEMLETGIKVIDL 150 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLG 211 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 151 LAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLIHEMTD 210 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 + K+ +V DE P R L+A+T+AEYF K VLL +D+I RF + E+ Sbjct: 211 SGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNIFRFTQAGSEV 270 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +T G +P A GY ++ E+ L ERI + IT++ ++ V D++ DP + Sbjct: 271 STLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADDYTDPAPATTF 328 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD L RS++++G YP VDPLAS SR+ + E ++ S + ++ R+++ +D Sbjct: 329 AHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVASEVKRILQRYKDLQD 388 Query: 389 IRLIGG 394 I I G Sbjct: 389 IIAILG 394 >gi|297806943|ref|XP_002871355.1| hypothetical protein ARALYDRAFT_487710 [Arabidopsis lyrata subsp. lyrata] gi|297317192|gb|EFH47614.1| hypothetical protein ARALYDRAFT_487710 [Arabidopsis lyrata subsp. lyrata] Length = 559 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 162/310 (52%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N LG+PID + K + + I P ++ ++ TGI+V+D+ P Sbjct: 167 ATLGRIMNVLGEPIDERGEI-KTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 225 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 226 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 284 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LG+ +S +V +E P R LT +T+AEYF ++G +VLL +D+I RF + Sbjct: 285 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEYFRDAEGQDVLLFIDNIFRFTQA 344 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ S+L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 345 NSEVSALLGRIPSAVGYQPTLASDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAP 402 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SR+ +E + ++ ++ Sbjct: 403 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYK 462 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 463 NLQDIIAILG 472 >gi|254440915|ref|ZP_05054408.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 307] gi|198250993|gb|EDY75308.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 307] Length = 474 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 161/308 (52%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G P+D + K D I + P ++ + TGI+VID+ P G Sbjct: 86 LGRILNVTGDPVDEKGPV-KSDQRRSIHGEAPKFEDQSTATEILVTGIKVIDLLAPYTKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG----- 211 +IG+F G+G+GK+ L+ + KV + + VGER RE + + + Sbjct: 145 GKIGLFGGAGVGKTVLIMELINN--IAKVHSGVSVFAGVGERTREGNDLYHEMIESGVIN 202 Query: 212 -DNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 +NL++S +V +E P R LT +++AE F G +VL +D+I RF + Sbjct: 203 LENLEESKIALVYGQMNEPPGARMRIALTGLSLAEQFRDDTGSDVLFFVDNIFRFTQAGS 262 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ + ERI + + G+IT+V +V V D+ DP + Sbjct: 263 EVSALLGRIPSAVGYQPTLATDMGAMQERI--ASTKGGSITSVQAVYVPADDLTDPAPAT 320 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R+++E+G YP VDPL S SRL D DE K+ + + ++ R++ Sbjct: 321 SFAHLDATTVLDRAISEKGIYPAVDPLGSTSRLLDPLIIGDEHYKVATDVQQILQRYKSL 380 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 381 QDIIAILG 388 >gi|147838606|emb|CAN69512.1| hypothetical protein VITISV_018718 [Vitis vinifera] Length = 560 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 97/278 (34%), Positives = 151/278 (54%), Gaps = 21/278 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+PID + K D + I + P +++ ++ TGI+V+D+ P Sbjct: 165 ATLGRIINVIGEPIDERGEI-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDLLAPYQ 223 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 224 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 282 Query: 209 YLGDNL-----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 LGD K +V +E P R LT +T+AE+F ++G +VLL +D+I RF Sbjct: 283 KLGDKQASFSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 342 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ D Sbjct: 343 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 400 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 P + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 401 PAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 438 >gi|148284424|ref|YP_001248514.1| F0F1 ATP synthase subunit beta [Orientia tsutsugamushi str. Boryong] gi|190358695|sp|A5CDA5|ATPB_ORITB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|146739863|emb|CAM79804.1| ATP synthase beta chain [Orientia tsutsugamushi str. Boryong] Length = 478 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 162/318 (50%), Gaps = 20/318 (6%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 + ++ GR++N +G+PID LG K D +I P +N+ K TGI Sbjct: 85 QIKVPVGKSILGRILNVVGQPID---DLGPIKCDNFSQIHKDAPKFINQSTSRKILITGI 141 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFI 206 +VID+ TP G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 142 KVIDLLTPYISGGKIGLFGGAGVGKTVLIMEIINNVAKAYKGYTVFTGVGERTREGGDLY 201 Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILD 257 ++ +G N+ K +V +E P R LT +TIAE F + VLL +D Sbjct: 202 KEMVGSNIIDLNKLENSKVTLVFGQMNEPPGARARVALTGLTIAESFRDMNEGEVLLFID 261 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + EI+T G +P A GY ++ +++ L ERI + + G IT++ ++ V Sbjct: 262 NIFRFTQAGAEISTLLGRIPSAVGYQPTLATDIGSLQERI--TSTKFGAITSIQAIYVPA 319 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-L 376 D+ DP + + LD VL+R +AE G YP VDPL S S++ D E V++ + Sbjct: 320 DDLTDPAPVACFAHLDATTVLSRKIAELGIYPAVDPLNSSSQILDANVIGQEHYSVATQV 379 Query: 377 THLIHRFEETRDIRLIGG 394 ++ ++ +D+ I G Sbjct: 380 QEILQTYKSLQDVIAILG 397 >gi|145222906|ref|YP_001133584.1| F0F1 ATP synthase subunit beta [Mycobacterium gilvum PYR-GCK] gi|315443371|ref|YP_004076250.1| ATP synthase, F1 subunit beta [Mycobacterium sp. Spyr1] gi|190358682|sp|A4T8K2|ATPB_MYCGI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|145215392|gb|ABP44796.1| ATP synthase F1, beta subunit [Mycobacterium gilvum PYR-GCK] gi|315261674|gb|ADT98415.1| ATP synthase, F1 beta subunit [Mycobacterium sp. Spyr1] Length = 476 Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 160/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + GK I K PP + + +TG++V+D+ TP G Sbjct: 97 GHVFNALGDCLD-EPGYGKDFEHWSIHRKPPPFSELEPRTEMLETGLKVVDLLTPYVRGG 155 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK + Sbjct: 156 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELEDANVLKDTA 215 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AE+F + +VLL +D+I RF + E++T G +P Sbjct: 216 LVFGQMDEPPGTRMRVALSALTMAEFFRDEQQQDVLLFIDNIFRFTQAGSEVSTLLGRMP 275 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 276 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 333 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++ +G +P VDPLAS S + D A DE ++ + ++ R+++ +DI I G Sbjct: 334 LSRTVFSKGIFPAVDPLASSSTILDPAVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 391 >gi|300024907|ref|YP_003757518.1| ATP synthase F1 subunit beta [Hyphomicrobium denitrificans ATCC 51888] gi|299526728|gb|ADJ25197.1| ATP synthase F1, beta subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 477 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 163/311 (52%), Gaps = 24/311 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + S+ + + P Q E TGI+V+D+ P G Sbjct: 87 GRIMNVIGEPVDEAGPIKTP--SVRAIHQPSPTFADQATEAQILVTGIKVVDLLAPYAKG 144 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + + Sbjct: 145 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYYEMIESKVNLD 203 Query: 214 LKKS---------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264 KK+ +V +E P R L+ +T+AE+F +G +VL +D+I RF Sbjct: 204 PKKNNGSAKGSKCALVYGQMNEPPGARARVALSGLTVAEHFRDQGQDVLFFVDNIFRFTQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP Sbjct: 264 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSITSVQAIYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + ++ ++ Sbjct: 322 PAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPRIVGEEHYQVARKVQAILQKY 381 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 382 KSLQDIIAILG 392 >gi|149029718|gb|EDL84889.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide, isoform CRA_a [Rattus norvegicus] Length = 529 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|150399122|ref|YP_001322889.1| V-type ATP synthase subunit B [Methanococcus vannielii SB] gi|167016634|sp|A6UP55|VATB_METVS RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|150011825|gb|ABR54277.1| H+transporting two-sector ATPase alpha/beta subunit central region [Methanococcus vannielii SB] Length = 462 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 25/319 (7%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ DI + E++ + + F +I S GR+ N GKP+DG Sbjct: 47 GQVLEAREDIAVVQVFEGTSELNTSETRVRFTGETAKIGVSKDMLGRIFNGAGKPLDGGP 106 Query: 118 SL---GKGDLS---MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSG 171 + K D++ + +S+ PP Q TGI ID L GQ+I +F+GSG Sbjct: 107 EIIAEKKVDINGYPLNPVSRNPPNAFVQ-------TGISTIDGTNTLVRGQKIPIFSGSG 159 Query: 172 IGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223 + + L + AR + F V+ + +G E F++++ L+K+VV + Sbjct: 160 LPHNMLAAQIARQAKVRGEGEQF-AVVFAAMGITSEESNYFMDEFKKTGALEKAVVFINL 218 Query: 224 SDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGY 282 +D+ I R + P A+T AEY + KG +VL+IL +T + ++REIA E+P RGY Sbjct: 219 ADDPAIERIITPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNEVPGRRGY 278 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P ++++L L ER G + ++G +T + + + D+ PI D I +G IVL+R L Sbjct: 279 PGYMYTDLASLYERAGRVKGKEGTVTQIPILTMPHDDITHPIPDLTGYITEGQIVLSREL 338 Query: 343 AEEGRYPPVDPLASVSRLA 361 +G YPPVD L S+SRLA Sbjct: 339 NRKGIYPPVDILPSLSRLA 357 >gi|23503593|dbj|BAC20393.1| ATP synthase beta-subunit [Chloromonas augustae] Length = 376 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K D ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKADTALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|15642757|ref|NP_232390.1| F0F1 ATP synthase subunit beta [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591160|ref|ZP_01678465.1| ATP synthase F1, beta subunit [Vibrio cholerae 2740-80] gi|121729382|ref|ZP_01682049.1| ATP synthase F1, beta subunit [Vibrio cholerae V52] gi|147674488|ref|YP_001218421.1| F0F1 ATP synthase subunit beta [Vibrio cholerae O395] gi|153212975|ref|ZP_01948569.1| ATP synthase F1, beta subunit [Vibrio cholerae 1587] gi|153803370|ref|ZP_01957956.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-3] gi|153823452|ref|ZP_01976119.1| ATP synthase F1, beta subunit [Vibrio cholerae B33] gi|153827188|ref|ZP_01979855.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-2] gi|153829668|ref|ZP_01982335.1| ATP synthase F1, beta subunit [Vibrio cholerae 623-39] gi|227082876|ref|YP_002811427.1| ATP synthase F1, beta subunit [Vibrio cholerae M66-2] gi|229508277|ref|ZP_04397781.1| ATP synthase beta chain [Vibrio cholerae BX 330286] gi|229508629|ref|ZP_04398124.1| ATP synthase beta chain [Vibrio cholerae B33] gi|229515969|ref|ZP_04405426.1| ATP synthase beta chain [Vibrio cholerae TMA 21] gi|229517155|ref|ZP_04406601.1| ATP synthase beta chain [Vibrio cholerae RC9] gi|229520153|ref|ZP_04409580.1| ATP synthase beta chain [Vibrio cholerae TM 11079-80] gi|229524893|ref|ZP_04414298.1| ATP synthase beta chain [Vibrio cholerae bv. albensis VL426] gi|229606551|ref|YP_002877199.1| F0F1 ATP synthase subunit beta [Vibrio cholerae MJ-1236] gi|254226932|ref|ZP_04920498.1| ATP synthase F1, beta subunit [Vibrio cholerae V51] gi|254291148|ref|ZP_04961945.1| ATP synthase F1, beta subunit [Vibrio cholerae AM-19226] gi|254851555|ref|ZP_05240905.1| ATP synthase subunit beta [Vibrio cholerae MO10] gi|255746826|ref|ZP_05420772.1| ATP synthase beta chain [Vibrio cholera CIRS 101] gi|262155906|ref|ZP_06029028.1| ATP synthase beta chain [Vibrio cholerae INDRE 91/1] gi|262167080|ref|ZP_06034795.1| ATP synthase beta chain [Vibrio cholerae RC27] gi|14547933|sp|Q9KNH5|ATPB_VIBCH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|172047489|sp|A5F459|ATPB_VIBC3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808173|sp|C3LSI9|ATPB_VIBCM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|9657365|gb|AAF95903.1| ATP synthase F1, beta subunit [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546977|gb|EAX57122.1| ATP synthase F1, beta subunit [Vibrio cholerae 2740-80] gi|121628663|gb|EAX61135.1| ATP synthase F1, beta subunit [Vibrio cholerae V52] gi|124116201|gb|EAY35021.1| ATP synthase F1, beta subunit [Vibrio cholerae 1587] gi|124121094|gb|EAY39837.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-3] gi|125620537|gb|EAZ48905.1| ATP synthase F1, beta subunit [Vibrio cholerae V51] gi|126519021|gb|EAZ76244.1| ATP synthase F1, beta subunit [Vibrio cholerae B33] gi|146316371|gb|ABQ20910.1| ATP synthase F1, beta subunit [Vibrio cholerae O395] gi|148874844|gb|EDL72979.1| ATP synthase F1, beta subunit [Vibrio cholerae 623-39] gi|149738911|gb|EDM53235.1| ATP synthase F1, beta subunit [Vibrio cholerae MZO-2] gi|150422993|gb|EDN14943.1| ATP synthase F1, beta subunit [Vibrio cholerae AM-19226] gi|227010764|gb|ACP06976.1| ATP synthase F1, beta subunit [Vibrio cholerae M66-2] gi|227012008|gb|ACP08218.1| ATP synthase F1, beta subunit [Vibrio cholerae O395] gi|229338474|gb|EEO03491.1| ATP synthase beta chain [Vibrio cholerae bv. albensis VL426] gi|229342747|gb|EEO07738.1| ATP synthase beta chain [Vibrio cholerae TM 11079-80] gi|229346218|gb|EEO11190.1| ATP synthase beta chain [Vibrio cholerae RC9] gi|229347069|gb|EEO12031.1| ATP synthase beta chain [Vibrio cholerae TMA 21] gi|229354343|gb|EEO19271.1| ATP synthase beta chain [Vibrio cholerae B33] gi|229354550|gb|EEO19472.1| ATP synthase beta chain [Vibrio cholerae BX 330286] gi|229369206|gb|ACQ59629.1| ATP synthase beta chain [Vibrio cholerae MJ-1236] gi|254847260|gb|EET25674.1| ATP synthase subunit beta [Vibrio cholerae MO10] gi|255735583|gb|EET90982.1| ATP synthase beta chain [Vibrio cholera CIRS 101] gi|262024466|gb|EEY43152.1| ATP synthase beta chain [Vibrio cholerae RC27] gi|262030358|gb|EEY49000.1| ATP synthase beta chain [Vibrio cholerae INDRE 91/1] gi|327485232|gb|AEA79639.1| ATP synthase beta chain [Vibrio cholerae LMA3894-4] Length = 467 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G ++ I P + + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGDIGAEEV-YSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL--------G 211 +IG+F G+G+GK+ + + +S+ VGER RE +F + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQ 204 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PELSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +KG+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E V+ + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|179279|gb|AAA51808.1| ATP synthase beta subunit [Homo sapiens] Length = 529 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 94/283 (33%), Positives = 150/283 (53%), Gaps = 16/283 (5%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 + +I GR++N +G+PID + + I ++ P M ++ TGI+V Sbjct: 131 QLKIPVGPETLGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKV 189 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VR 203 +D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 190 VDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYH 248 Query: 204 EFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 E IE L D K +V ++ P R LT +T+AEYF +G +VLL +D+I Sbjct: 249 EMIESGVINLKDATSKVALVYGQMNQPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNI 308 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 309 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADD 366 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD VL+R++AE G YP VDPL S SR+ D Sbjct: 367 LTDPAPATTFADLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 409 >gi|238018582|ref|ZP_04599008.1| hypothetical protein VEIDISOL_00409 [Veillonella dispar ATCC 17748] gi|237865053|gb|EEP66343.1| hypothetical protein VEIDISOL_00409 [Veillonella dispar ATCC 17748] Length = 474 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D D + D I P + + +TGI+V+D+ P G Sbjct: 92 LGRIFNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + + S VGER RE + + + K+ Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D +E V+ + ++ ++ + +DI I G Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGEEHYTVARGVQEVLQKYRDLQDIIAILG 388 >gi|226307392|ref|YP_002767352.1| ATP synthase beta chain [Rhodococcus erythropolis PR4] gi|229490005|ref|ZP_04383858.1| ATP synthase F1, beta subunit [Rhodococcus erythropolis SK121] gi|259585449|sp|C1A1X8|ATPB_RHOE4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226186509|dbj|BAH34613.1| ATP synthase beta chain [Rhodococcus erythropolis PR4] gi|229323106|gb|EEN88874.1| ATP synthase F1, beta subunit [Rhodococcus erythropolis SK121] Length = 483 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D LG+ I K PPA ++ + + +TGI+VID+ TP G Sbjct: 105 GHVFNALGDCLD-TPGLGRDGEQWGIHRK-PPAFDQLEGKTEILETGIKVIDLLTPYVKG 162 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ + Sbjct: 163 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQDT 222 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L+A+T+AEYF +G +VLL +D+I RF + E++T G + Sbjct: 223 ALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGRM 282 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 283 PSAVGYQPTLADEMGELQERITSTRGR--SITSLQAIYVPADDYTDPAPATTFAHLDATT 340 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +++ G YP VDPL+S SR+ + A+ ++ + + ++ +++E +DI I G Sbjct: 341 ELSRPISQMGIYPAVDPLSSTSRILEPGIVGAEHFRVANEVKRILQKYKELQDIIAILG 399 >gi|145608354|ref|XP_360642.2| ATP synthase beta chain, mitochondrial [Magnaporthe oryzae 70-15] gi|145015832|gb|EDK00322.1| ATP synthase beta chain, mitochondrial [Magnaporthe oryzae 70-15] Length = 514 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 15/304 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K D + I ++ P + + + TGI+V+D+ P G Sbjct: 126 LGRIMNVTGDPIDERGPI-KTDKYLPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARG 184 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 185 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVIQL 243 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 D K +V +E P R LT +T+AE F ++G +VLL +D+I RF + E++ Sbjct: 244 DGESKVSLVFGQMNEPPGARARVALTGLTVAEQFRNEGQDVLLFIDNIFRFTQAGSEVSA 303 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 304 LLGRIPSAVGYQPTLAVDMGGMQERI--TTTQKGSITSVQAVYVPADDLTDPAPATTFAH 361 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD VL+R ++E G YP VDPL S SR+ D E ++ + + ++ ++ +DI Sbjct: 362 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYEVATRVQQILQEYKSLQDII 421 Query: 391 LIGG 394 I G Sbjct: 422 AILG 425 >gi|94495684|ref|ZP_01302264.1| ATP synthase F1, beta subunit [Sphingomonas sp. SKA58] gi|94425072|gb|EAT10093.1| ATP synthase F1, beta subunit [Sphingomonas sp. SKA58] Length = 481 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 95/313 (30%), Positives = 159/313 (50%), Gaps = 21/313 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + + +L I +K P +++ TGI+VID+ P Sbjct: 86 ATLGRILNVVGEPIDERGPV-QTELRSPIHAKAPEFIDQSTDASILVTGIKVIDLLAPYA 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + + + VGER RE + ++L N+ Sbjct: 145 KGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGERTREGNDLYHEFLDANVIA 204 Query: 215 -----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 K +V +E P R L+ +TIAEYF + +VL +D+I RF Sbjct: 205 KDADGNAISEGSKVALVYGQMNEPPGARARVALSGLTIAEYFRDVENQDVLFFVDNIFRF 264 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ D Sbjct: 265 TQAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTNKGSITSVQAVYVPADDLTD 322 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381 P + + LD VLNR+++E G YP VDPL S SR L + + + ++ ++ Sbjct: 323 PAPATSFAHLDATTVLNRAISELGIYPAVDPLDSTSRVLEPRVVGQEHYETARAVQSILQ 382 Query: 382 RFEETRDIRLIGG 394 +++ +DI I G Sbjct: 383 KYKSLQDIIAILG 395 >gi|34536477|dbj|BAC87672.1| beta subunit of ATP synthase [Chlamydomonas noctigama] Length = 376 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 103/313 (32%), Positives = 161/313 (51%), Gaps = 30/313 (9%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + D ++ I K P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGPVKIED-TLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLQDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR------LADKAWSADEKKLVSSLTHLIH 381 + LD VL+R+LA +G YP VDPL S S L DK +SA + S+ + Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTMLQPWILGDKHYSAAQ-----SVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 321 RYKELQDIIAILG 333 >gi|66826095|ref|XP_646402.1| ATP synthase beta chain, mitochondrial [Dictyostelium discoideum AX4] gi|74997414|sp|Q55CS9|ATPB_DICDI RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|60474371|gb|EAL72308.1| ATP synthase beta chain, mitochondrial [Dictyostelium discoideum AX4] Length = 651 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 101/339 (29%), Positives = 170/339 (50%), Gaps = 16/339 (4%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 IV + I + + G LV + G + P GR++N +G+PIDG + + Sbjct: 157 IVRCVALDITDGLGRGALVLNTGSPLMVPVGQATLGRIMNVIGEPIDGCGPIPATE-KRP 215 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I PP + +TGI+VID+ P G +IG+F G+G+GK+ L+ + Sbjct: 216 IWRAPPPFADLAPSASILETGIKVIDLLAPYSRGGKIGLFGGAGVGKTVLIQELINNIAK 275 Query: 188 DK---VIISLVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLT 237 + + VGER RE + + + + K +V +E P R LT Sbjct: 276 AHGGFSVFTGVGERTREGNDLYHEMVEAGVIKKEGPGSKVALVFGQMNEPPGARARVTLT 335 Query: 238 AVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +T+AEYF ++G +VLL +D+I RF + E++ G +P A GY ++ +++ + ER Sbjct: 336 GLTVAEYFRDAEGQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGCMQER 395 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 I ++K G+IT+V +V V D+ DP + + LD VL+R+++E G YP VDPL S Sbjct: 396 IATTKK--GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPCVDPLDS 453 Query: 357 VSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 S + D + K+ + + ++ ++ +DI I G Sbjct: 454 TSLMMDPNIIGVEHYKVATDVQKILQEYKSLQDIIAILG 492 >gi|87121037|ref|ZP_01076928.1| ATP synthase subunit B [Marinomonas sp. MED121] gi|86163529|gb|EAQ64803.1| ATP synthase subunit B [Marinomonas sp. MED121] Length = 458 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + I + P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDEKGPIGEEE-RWAIHREAPSYAEQSSDNALLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + K Sbjct: 142 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 202 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMP 261 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + S LD +V Sbjct: 262 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFSHLDATVV 319 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP +DPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 LSRDIASLGIYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQTVLQRYKELKDIIAILG 377 >gi|15805728|ref|NP_294424.1| V-type ATP synthase subunit B [Deinococcus radiodurans R1] gi|12585483|sp|Q9RWG7|VATB_DEIRA RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|6458406|gb|AAF10279.1|AE001926_11 v-type ATP synthase, B subunit [Deinococcus radiodurans R1] Length = 471 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 152/276 (55%), Gaps = 11/276 (3%) Query: 94 RISPSACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ S GR + LG+PIDG ++ + LS++ P A R + E+ +TGI I Sbjct: 81 RLGVSKEMIGRRFDGLGRPIDGLPAVVAEQRLSVDGQPMNPAA--RAKPEEFIQTGISTI 138 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFI 206 D+ T L GQ++ +F+GSG+ + L + AR V+ + +G REV F Sbjct: 139 DVQTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDFAVVFAAMGLTQREVSFFT 198 Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264 +++ L +SV+ + +D+ + R + P A+T AEY + G +VL+IL +T + Sbjct: 199 QEFERTGALARSVLFLNKADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDLTNYCE 258 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI E+P RG+P ++++L L ER G E + G++T V + + D+ PI Sbjct: 259 ALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVEGKPGSVTQVPILSMPDDDITHPI 318 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 D I +G IV++R+L +G +PP++PL S+SRL Sbjct: 319 PDLTGYITEGQIVVDRTLNSKGVFPPINPLPSLSRL 354 >gi|221128055|ref|XP_002155577.1| PREDICTED: similar to ATP synthase beta subunit [Hydra magnipapillata] gi|260222684|emb|CBA32489.1| ATP synthase subunit beta 1 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 471 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 158/308 (51%), Gaps = 17/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID + +L+ I K P ++ +TGI+VID+ P Sbjct: 87 ATLGRIMDVLGAPIDERGPVAS-ELTASIHRKAPTYDELSPSQELLETGIKVIDLVCPFA 145 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 146 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSGVV 204 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 ++L KS V V +E P R LT +TIAE F +G +VL +D+I R+ + Sbjct: 205 NLEDLPKSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGT 264 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 265 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 322 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD +VL+R +A G YP VDPL S SR D +E ++ + R++E Sbjct: 323 TFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGEEHYNTARAVQGTLQRYKEL 382 Query: 387 RDIRLIGG 394 RDI I G Sbjct: 383 RDIIAILG 390 >gi|119368477|sp|Q1AVH9|ATPB_RUBXD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 503 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++ LG+P+D + G+ D I P + + F +GI+VID+ P+ Sbjct: 102 LGRVLDVLGEPVDEQGPVEGEAD-RWPIHRPAPKFEDLSTKAEQFVSGIKVIDLLCPVRR 160 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGRE-VREFIEDYLGDNLKK 216 G ++G+F G+G+GK+ L++ + + + VGER RE + E LK Sbjct: 161 GGKVGLFGGAGVGKTVLITELINNIALQYEGTSVFTGVGERTREGTALYGEMEEAGVLKN 220 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + ++ +E P R LT VTIAEYF G +VL LD+I RFA + E++ G Sbjct: 221 TALIFGQMNEPPGARFRVGLTGVTIAEYFRDVLGQDVLFFLDNIFRFAQAGNEVSALMGR 280 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P GY ++ +E+ L ERI + +KG+IT+ +V V D+ DP +V + LD Sbjct: 281 MPSEVGYQPTLGTEMGALQERI--TSTKKGSITSFQAVYVPADDPTDPAPFTVFAHLDST 338 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + L+RSL E+ +P VDPLAS S + D E ++ + ++ R++E +DI I G Sbjct: 339 VELSRSLFEQAIFPAVDPLASSSTILDPDVVGQEHYEVAQEVKGILQRYKELQDIIAILG 398 >gi|91178132|gb|ABE27301.1| mitochondrial F-ATPase beta subunit [Candida rugosa] Length = 337 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 158/305 (51%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G P+D + K D I ++ P + + +TGI+V+D+ P G Sbjct: 19 SGRILNVTGDPVDERGPV-KTDKFRPIHAEAPAFDEQATSAEVLETGIKVVDLLAPYAKG 77 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--G 211 +IG+F G+G+GK+ + + A++ V VGER RE +E IE + Sbjct: 78 GKIGLFGGAGVGKTVFIQESINNIAKAHGGYSVFTG-VGERTREGNDLYKEMIESGVINL 136 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 137 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGKDVLLFVDNIFRFTQAGSEVS 196 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY + +++ L ERI + +KG++T+V +V V D+ DP + + Sbjct: 197 ALLGRIPSAVGYQPTSATDMGALQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTFA 254 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R+++E G YP VDPL S SRL D A E +S+ + ++ +DI Sbjct: 255 HLDATTVLSRAISELGIYPAVDPLDSKSRLLDAAVVGQEHYDTATSVQQTLQAYKSLQDI 314 Query: 390 RLIGG 394 I G Sbjct: 315 IAILG 319 >gi|54792127|ref|NP_599191.1| ATP synthase subunit beta, mitochondrial precursor [Rattus norvegicus] gi|114562|sp|P10719|ATPB_RAT RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|71681130|gb|AAH99743.1| ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide [Rattus norvegicus] Length = 529 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|326935486|ref|XP_003213801.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Meleagris gallopavo] Length = 441 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 95/281 (33%), Positives = 148/281 (52%), Gaps = 16/281 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 RI GR++N +G+PID + + I ++ P + ++ TGI+V+D Sbjct: 46 RIPVGPETLGRIMNVIGEPIDERGPITTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVVD 104 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205 + P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 105 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEM 163 Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 IE L D K +V +E P R LT +T+AEYF +G +VLL +D+I R Sbjct: 164 IESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFR 223 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ Sbjct: 224 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVPADDLT 281 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD VL+R++AE G YP VDPL S SR+ D Sbjct: 282 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMD 322 >gi|219112331|ref|XP_002177917.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410802|gb|EEC50731.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 501 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 157/313 (50%), Gaps = 22/313 (7%) Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQ-RVEKGFKTGIRVIDIFTPL 158 GR+IN +G+P+D G L K + + P Q R + TGI+V+D+ P Sbjct: 108 LGRIINVIGEPVDEKGPIFLSKEAEKYAPLHRAAPTFTEQGRSQDILVTGIKVVDLLAPY 167 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREF---------- 205 G +IG+F G+G+GK+ ++ + + + + VGER RE + Sbjct: 168 AKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMIEGGVI 227 Query: 206 -IEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 I++ G K+ +V +E P R LT + IAEYF +G +VLL +D+I RF Sbjct: 228 KIDEKTGSTAGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRF 287 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ D Sbjct: 288 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTGKGSITSVQAVYVPADDLTD 345 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIH 381 P + + LD VL+RS+AE G YP VDPL S SR+ D + + S L+ Sbjct: 346 PAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARSTQKLLQ 405 Query: 382 RFEETRDIRLIGG 394 ++ +DI I G Sbjct: 406 DYKSLQDIIAILG 418 >gi|331269017|ref|YP_004395509.1| V-type ATPase subunit B [Clostridium botulinum BKT015925] gi|329125567|gb|AEB75512.1| V-type ATPase, B subunit [Clostridium botulinum BKT015925] Length = 460 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 100/325 (30%), Positives = 170/325 (52%), Gaps = 17/325 (5%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117 G+V+ I+ D I I+L D + GR I S GRV + LG+P DG Sbjct: 42 GKVLEISEDKALIQLFEGSTGINLKDTKTRFLGRPLEIGLSEDMLGRVFDGLGRPKDGGP 101 Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + K D++ E ++ +R + +TG+ ID L GQ++ VF+GSG+ Sbjct: 102 KIIPEEKRDINGEPLN----PFSRDYPSEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPH 157 Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDES 227 + L + AR SD V+ + +G E + FIED+ ++ ++V+ + +++ Sbjct: 158 AELAAQIARQAKVLGSDSKFAVVFAAMGITFEEAQFFIEDFTQTGSIDRTVLFMNLANDP 217 Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 + R P A+T AE+ + KG +VL+I+ +T +A ++RE++ E+P RGYP + Sbjct: 218 AVERIATPRIALTTAEFLAYEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYL 277 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L L ER G + + G+IT + + + D+ PI D I +G I+L+R L ++G Sbjct: 278 YTDLSTLYERAGRVKGKPGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKKG 337 Query: 347 RYPPVDPLASVSRLADKAWSADEKK 371 PP+D L S+SRL DK D+ + Sbjct: 338 IMPPIDVLPSLSRLKDKGIGKDKTR 362 >gi|310827780|ref|YP_003960137.1| sodium-transporting two-sector ATPase [Eubacterium limosum KIST612] gi|308739514|gb|ADO37174.1| sodium-transporting two-sector ATPase [Eubacterium limosum KIST612] Length = 469 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 102/356 (28%), Positives = 174/356 (48%), Gaps = 19/356 (5%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 + Q LG+V+ +N D +V + G IS + F + S GRV + Sbjct: 32 IEQADGEKRLGKVLEVNGDKAMVQLYESSQGLRISNSKVRFQGHGIELGVSKDMLGRVFD 91 Query: 108 ALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 +G+P DG + K D++ M+ V R + +TG+ ID L GQ++ Sbjct: 92 GMGRPTDGGPEIIPEKKLDINGSPMNPVA----RDYPAEFIQTGVSAIDGLNTLVRGQKL 147 Query: 165 GVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 VF+GSG+ + L + AR +D V+ + +G E F++D+ ++++ Sbjct: 148 PVFSGSGLPHAQLAAQIARQARVLDNDEGFAVVFAAIGITFEEADFFVKDFRRTGAIERA 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276 V+ + +++ + R P A+T AEY + + D VL+IL IT +A ++RE++ E+ Sbjct: 208 VLFMNYANDPAVERISTPRMAITCAEYLAYELDMQVLVILTDITNYAEALREVSAARKEV 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P RGYP ++++L L ER G +KG+IT + + + D+ PI D I +G I Sbjct: 268 PGRRGYPGYLYTDLATLYERAGRMRGKKGSITQIPILSMPEDDKTHPIPDLTGYITEGQI 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADE--KKLVSSLTHLIHRFEETRDIR 390 +L+R L G PP+D L S+SRL DK + K ++ L + +D + Sbjct: 328 ILSRDLYRRGIEPPIDVLPSLSRLKDKGIGEGKTRKDHADTMNQLFSAYARGKDAK 383 >gi|261213283|ref|ZP_05927565.1| ATP synthase beta chain [Vibrio sp. RC341] gi|262190641|ref|ZP_06048876.1| ATP synthase beta chain [Vibrio cholerae CT 5369-93] gi|262402102|ref|ZP_06078666.1| ATP synthase beta chain [Vibrio sp. RC586] gi|260837557|gb|EEX64260.1| ATP synthase beta chain [Vibrio sp. RC341] gi|262033479|gb|EEY51982.1| ATP synthase beta chain [Vibrio cholerae CT 5369-93] gi|262351748|gb|EEZ00880.1| ATP synthase beta chain [Vibrio sp. RC586] Length = 467 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G ++ I P + + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGDIGAEEV-YSIHRPAPSYEEQSSATELLETGVKVIDLICPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL--------G 211 +IG+F G+G+GK+ + + +S+ VGER RE +F + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNVEQ 204 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PELSKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +KG+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E V+ + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQATLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|225456079|ref|XP_002280824.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 554 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 96/275 (34%), Positives = 152/275 (55%), Gaps = 18/275 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+PID + K D + I + P +++ ++ TGI+V+D+ P Sbjct: 162 ATLGRIINVIGEPIDERGDI-KTDHFLPIHREAPSFVDQATEQQILVTGIKVVDLLAPYQ 220 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 221 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 279 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LG+ +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF + Sbjct: 280 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 339 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 340 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 397 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 398 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 432 >gi|108804474|ref|YP_644411.1| F0F1 ATP synthase subunit beta [Rubrobacter xylanophilus DSM 9941] gi|108765717|gb|ABG04599.1| ATP synthase F1, beta subunit [Rubrobacter xylanophilus DSM 9941] Length = 513 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV++ LG+P+D + G+ D I P + + F +GI+VID+ P+ Sbjct: 112 LGRVLDVLGEPVDEQGPVEGEAD-RWPIHRPAPKFEDLSTKAEQFVSGIKVIDLLCPVRR 170 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGRE-VREFIEDYLGDNLKK 216 G ++G+F G+G+GK+ L++ + + + VGER RE + E LK Sbjct: 171 GGKVGLFGGAGVGKTVLITELINNIALQYEGTSVFTGVGERTREGTALYGEMEEAGVLKN 230 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + ++ +E P R LT VTIAEYF G +VL LD+I RFA + E++ G Sbjct: 231 TALIFGQMNEPPGARFRVGLTGVTIAEYFRDVLGQDVLFFLDNIFRFAQAGNEVSALMGR 290 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P GY ++ +E+ L ERI + +KG+IT+ +V V D+ DP +V + LD Sbjct: 291 MPSEVGYQPTLGTEMGALQERI--TSTKKGSITSFQAVYVPADDPTDPAPFTVFAHLDST 348 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + L+RSL E+ +P VDPLAS S + D E ++ + ++ R++E +DI I G Sbjct: 349 VELSRSLFEQAIFPAVDPLASSSTILDPDVVGQEHYEVAQEVKGILQRYKELQDIIAILG 408 >gi|325968451|ref|YP_004244643.1| V-type H+-transporting ATPase B [Vulcanisaeta moutnovskia 768-28] gi|323707654|gb|ADY01141.1| V-type H+-transporting ATPase subunit B [Vulcanisaeta moutnovskia 768-28] Length = 476 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 97/320 (30%), Positives = 169/320 (52%), Gaps = 16/320 (5%) Query: 84 GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G V +GR R+ + GRV++ G+P DG L + ++I + R+ E Sbjct: 76 GSTVKFYGRTLRMPVTEDLLGRVLDGKGQPRDGL-PLPPAEEYLDINGEPLNPYAREYPE 134 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVG 196 + +TG+ VID + GQ++ +F+G+G+ + L + AR +I + +G Sbjct: 135 EPIETGVSVIDGLNTMVRGQKLPIFSGTGLPHNMLAAQVARQATVRGHEEEFAIIFAAMG 194 Query: 197 ERGREVREFIEDYLGDNLKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLL 254 + E F+ ++ + +V+V PI R + P TA+TIAEY + D +VL+ Sbjct: 195 LKSEEALFFLNEFRRTGALRRLVMVLNLASDPIAERILTPRTALTIAEYLAWYRDYHVLV 254 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 IL +T +A ++RE++++ GELP RGYP ++++ + ER G ++ +KG+IT + Sbjct: 255 ILTDMTNYAEALRELSSSKGELPGRRGYPGYMYTDFATIYERTGRAKGKKGSITQFPILT 314 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA----WSADEK 370 + D+ PI D I +G +VL+R+L +G YPP D + S+SRL A + D+ Sbjct: 315 MPHDDITHPIPDLTGYITEGQLVLSRTLWGKGIYPPFDVIMSLSRLMKDAVGEGKTRDDH 374 Query: 371 KLVSSLTHLIHRFEETRDIR 390 K V++ LI + + D+R Sbjct: 375 KYVAN--QLIAAYSRSLDVR 392 >gi|313228038|emb|CBY23188.1| unnamed protein product [Oikopleura dioica] Length = 480 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 171/334 (51%), Gaps = 26/334 (7%) Query: 79 EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVP 133 E + G +V G R+ GR+IN +G+ ID +G + E I ++ P Sbjct: 72 ERLVRGQIVNDTGAPIRVPVGPSTLGRIINVIGEAIDE-----RGPVETEHYAPIHAEAP 126 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDK 189 + + + +TGI+V+D+ P G +IG+F G+G+GK+ L++ A++ Sbjct: 127 ALTDTEGAAEILETGIKVVDLIAPYSKGGKIGLFGGAGVGKTVFIMELINNVAKAHGGYS 186 Query: 190 VIISLVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIA 242 V VGER RE + + + + K +V +E P R LT +T+A Sbjct: 187 VFAG-VGERTREGNDLYHEMIEGGVINIDGPGSKVALVYGQMNEPPGARARVALTGLTVA 245 Query: 243 EYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 EYF +G +VLL +D+I RF + E++ G +P A GY ++ +++ ++ ERI + Sbjct: 246 EYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TT 303 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 +KG+IT+V ++ V D+ DP + S LD VL+R++AE G YP VDPL S SR+ Sbjct: 304 TKKGSITSVQAIYVPADDLTDPSPATTFSHLDATTVLSRAIAELGFYPAVDPLESTSRIM 363 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D +E +++ ++ ++ +DI I G Sbjct: 364 DPHVVGNEHYDCAAAVKKILQDYKGLQDIIAILG 397 >gi|258690304|gb|ACV87914.1| ATP synthase beta subunit [Darwinella muelleri] Length = 427 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 147/276 (53%), Gaps = 22/276 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+IN +G+PID +G + E I + P + ++ +TGI+V+D+ P Sbjct: 64 LGRIINVIGEPIDE-----RGPVETESKSPIHQEAPEFADMNVDQEILETGIKVVDLLAP 118 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY----- 209 G +IG+F G+G+GK+ L+ + + + VGER RE + + Sbjct: 119 YTKGGKIGLFGGAGVGKTVLIMELINNVAHAHGGYSVFAGVGERTREGNDLYHEMITSGV 178 Query: 210 --LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 179 ISLKDDSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAG 238 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP Sbjct: 239 SEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIFVPADDLTDPAPA 296 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + + LD VL+R+++E G YP VDPL S SR+ D Sbjct: 297 TTFAHLDATTVLSRAISELGIYPAVDPLDSTSRIMD 332 >gi|256387193|gb|ACU80597.1| ATP synthase beta subunit [Pycnophyes sp. MR-2009] Length = 335 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 101/319 (31%), Positives = 164/319 (51%), Gaps = 25/319 (7%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTG 148 RI G +IN +G+PID +G ++ + I + P + ++ TG Sbjct: 11 IRIPVGPETLGGIINVIGEPIDE-----RGPVTTQKQAAIHQEAPEFVEMSTEQEILVTG 65 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 66 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGND 124 Query: 202 -VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 E IE L D+ K +V +E P R LT +T+AEYF +G +VLL + Sbjct: 125 LYHEMIESGVISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDDEGQDVLLFI 184 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V Sbjct: 185 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTQKGSITSVQAIYVP 242 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R ++E G YP VDPL S SR+ D +E V+ Sbjct: 243 ADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSTSRIMDANIVGEEHYQVARG 302 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 303 VQKILQDYKSLQDIIAILG 321 >gi|195495396|ref|XP_002095249.1| GE22293 [Drosophila yakuba] gi|194181350|gb|EDW94961.1| GE22293 [Drosophila yakuba] Length = 627 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 107/315 (33%), Positives = 160/315 (50%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R++ GR++N +G PID D K D I + P + + TGI+VI Sbjct: 178 IRVAVGKAVLGRILNVVGDPID-DRGEIKSDYYSFIHNDAPELTDLSVKPEILVTGIKVI 236 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A+S V + GER RE E Sbjct: 237 DLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGNDLYHE 295 Query: 205 FIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 IE L D K V+V +E P R LT +TIAEYF G +VLL +D+I Sbjct: 296 MIESKVISLEDESSKVVLVFGQMNEPPGARSRVVLTGLTIAEYFRDVDGQDVLLFIDNIF 355 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + G+IT+V +V V D+ Sbjct: 356 RFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTRNGSITSVQAVYVPADDL 413 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 +DP + S LD VL+R +AE G YP VDPL S SR+ D +E V+ ++ Sbjct: 414 SDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRILDPDVVGEEHYNVARAVQKT 473 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 474 LQAYKSLQDIIAILG 488 >gi|91178138|gb|ABE27304.1| mitochondrial F-ATPase beta subunit [Candida viswanathii] Length = 337 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 162/306 (52%), Gaps = 20/306 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID D + I ++ P + + + +TGI+V+D+ P G Sbjct: 20 GRIINVVGEPID-DRGPIECKERKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARGG 78 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 79 KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINLE 137 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 138 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 195 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 196 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 253 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D A E + + + + ++ +D Sbjct: 254 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATGVQQTLQAYKSLQD 313 Query: 389 IRLIGG 394 I I G Sbjct: 314 IIAILG 319 >gi|198421396|ref|XP_002128220.1| PREDICTED: similar to ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit [Ciona intestinalis] Length = 520 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 151/288 (52%), Gaps = 24/288 (8%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFK 146 G R+ GR+IN +G+PID +G + E I + P ++ ++ + Sbjct: 120 GPIRVPVGPGTLGRIINVIGEPIDE-----RGPVDTEHFAGIHAPPPDLIDTGGAQEILE 174 Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREV 202 TGI+V+D+ P G +IG+F G+G+GK+ L++ A++ V VGER RE Sbjct: 175 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVFIMELINNVAKAHGGYSVFAG-VGERTREG 233 Query: 203 REFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLL 254 + + L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 234 NDLYHEMIDSGVISLTDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDMEGQDVLL 293 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 294 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 351 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 V D+ DP + S LD VL+R ++E G YP VDPL S SR+ D Sbjct: 352 VPADDLTDPSPATTFSHLDATTVLSRQVSELGFYPAVDPLESSSRIMD 399 >gi|84622325|ref|YP_449697.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|122879043|ref|YP_199371.6| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae KACC10331] gi|188578711|ref|YP_001915640.1| F0F1 ATP synthase subunit beta [Xanthomonas oryzae pv. oryzae PXO99A] gi|118573780|sp|Q2P7Q4|ATPB_XANOM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573781|sp|Q5H4Y4|ATPB_XANOR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740691|sp|B2SQB0|ATPB_XANOP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|84366265|dbj|BAE67423.1| ATP synthase beta chain [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188523163|gb|ACD61108.1| ATP synthase F1, beta subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 468 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|282849843|ref|ZP_06259227.1| ATP synthase F1, beta subunit [Veillonella parvula ATCC 17745] gi|294792757|ref|ZP_06757904.1| ATP synthase F1, beta subunit [Veillonella sp. 6_1_27] gi|282580780|gb|EFB86179.1| ATP synthase F1, beta subunit [Veillonella parvula ATCC 17745] gi|294456656|gb|EFG25019.1| ATP synthase F1, beta subunit [Veillonella sp. 6_1_27] Length = 474 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D D + D I P + + +TGI+V+D+ P G Sbjct: 92 LGRIFNVLGETVDHDPAPVVADEKWPIHRPAPKFDDLSPDTQILETGIKVVDLIAPYVKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + + S VGER RE + + + K+ Sbjct: 152 GKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFSGVGERTREGNDLWNEMKESGVINKT 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G + Sbjct: 212 ALVYGQMNEPPGARMRVGLTGLTMAEYFRDVKKQDVLLFIDNIFRFIQAGSEVSALLGRM 271 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP + + LD Sbjct: 272 PSAVGYQPTLANDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAATFAHLDATT 329 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+RS+AE G YP VDPL S SR+ D +E V+ + ++ ++ + +DI I G Sbjct: 330 VLSRSIAELGIYPAVDPLDSTSRILDPHVLGEEHYAVARGVQEVLQKYRDLQDIIAILG 388 >gi|43641|emb|CAA49776.1| ATP synthase subunit [Halobacterium salinarum] Length = 471 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 166/335 (49%), Gaps = 25/335 (7%) Query: 76 GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 G+G++ S+ F ++ + GRV++ G PIDG + D ++I+ + Sbjct: 61 GVGKDASV---RFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDD-RVDIVGEAINP 116 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------- 188 R+ E+ +TG+ ID L GQ++ +F+GSG+ S L AR Sbjct: 117 HAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETD 176 Query: 189 -------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240 V+ +G E EF++D+ L++SVV + +D+ + R + P A+T Sbjct: 177 DDEGSEFAVVFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALT 236 Query: 241 IAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 AEY + + D +VL+IL +T + ++R+I E+P RGYP ++++L +L ER G Sbjct: 237 TAEYLAFEKDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLAQLYERAGR 296 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 E ++G++T + + + GD+ PI D I +G I++NR L +G PPV+ L S+SR Sbjct: 297 IEGKEGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIMMNRDLNSQGVTPPVNVLPSLSR 356 Query: 360 LADKAWS-----ADEKKLVSSLTHLIHRFEETRDI 389 L D AD + L EE RD+ Sbjct: 357 LMDDGIGEGLTRADHGDVSDQLYAAYAEGEELRDL 391 >gi|114563|sp|P05440|ATPB_RHOBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|45980|emb|CAA77303.1| ATPase beta subunit [Rhodobacter blasticus] Length = 478 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 162/310 (52%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + + I K P ++ + TGI+VID+ P Sbjct: 88 ATLGRILNVVGEPIDERGPIAATE-KRAIHQKAPDFQSQSTESQILVTGIKVIDLLAPYS 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE EFIE + Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGYSVFAGVGERTREGNDLYHEFIESGV 204 Query: 211 G--DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 D+L+KS V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 205 INIDDLEKSKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 264 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ +L ERI + + G+IT+V ++ V D+ DP Sbjct: 265 GSEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKAGSITSVQAIYVPADDLTDPAP 322 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD L+R+++E G YP VDPL S SRL D +E ++ ++ R++ Sbjct: 323 ATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRLMDPQILGEEHYNTARAVQGILQRYK 382 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 383 SLQDIIAILG 392 >gi|322694068|gb|EFY85908.1| ATP synthase beta chain precursor [Metarhizium acridum CQMa 102] Length = 587 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN G PID + K D + I S+ P ++ + TGI+V+D+ P Sbjct: 197 ATLGRIINVTGDPIDERGPI-KTDKFLPIHSEPPEFTDQSTSAEILVTGIKVVDLLAPYA 255 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 256 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 314 Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 315 QLDGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDQEGQDVLLFIDNIFRFTQAGSE 374 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 375 VSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATT 432 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SR+ D +E + + ++ ++ + Sbjct: 433 FAHLDATTVLSRGISELGIYPAVDPLDSTSRMLDPRIVGEEHYNTATRVQQILQEYKSLQ 492 Query: 388 DIRLIGG 394 DI I G Sbjct: 493 DIIAILG 499 >gi|163745700|ref|ZP_02153060.1| F0F1 ATP synthase subunit beta [Oceanibulbus indolifex HEL-45] gi|161382518|gb|EDQ06927.1| F0F1 ATP synthase subunit beta [Oceanibulbus indolifex HEL-45] Length = 474 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 105/322 (32%), Positives = 164/322 (50%), Gaps = 28/322 (8%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKT 147 + R+ GR++N G +D KG ++ E + P Q E T Sbjct: 76 QIRVPVGTATLGRIMNVTGDAVDE-----KGPVNSEATRAIHGDAPEFAEQSTETQILVT 130 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE- 201 GI+VID+ P G +IG+F G+G+GK+ L+ + KV + + VGER RE Sbjct: 131 GIKVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGLSVFAGVGERTREG 188 Query: 202 ---VREFIED--YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVL 253 E IE + DNL +S +V +E P R LT +T+AE F + G +VL Sbjct: 189 NDLYHEMIESGVIVPDNLVESKIALVYGQMNEPPGARMRIALTGLTLAEQFRDESGSDVL 248 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 +D+I RF + E++ G +P A GY ++ +++ + ERI ++ G+IT+V +V Sbjct: 249 FFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGVMQERIASTKS--GSITSVQAV 306 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KL 372 V D+ DP + + LD VL+RS++E+G YP VDPL S SRL D DE K+ Sbjct: 307 YVPADDLTDPAPATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPLIIGDEHYKV 366 Query: 373 VSSLTHLIHRFEETRDIRLIGG 394 + + ++ R++ +DI I G Sbjct: 367 ATDVQQVLQRYKSLQDIIAILG 388 >gi|119350551|gb|ABL63226.1| AtpB [Sphaeroplea soleirolii var. crassisepta] Length = 392 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + ++ I K P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNMGPVNNEE-TLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + E Sbjct: 158 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + + W EK ++ + R++E Sbjct: 274 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYSCAQTIKKTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|139001535|dbj|BAF51687.1| ATP synthase beta subunit [Dicyema acuticephalum] gi|139001541|dbj|BAF51688.1| ATP synthase beta subunit [Dicyema acuticephalum] Length = 414 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 149/282 (52%), Gaps = 18/282 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 RI A GR++N +G+PID + + D+ I + P + +TGI+V+D Sbjct: 21 RIPVGAATLGRIMNVIGEPIDERGPI-QTDVYSSIYADAPEFSEMSTEQMVLETGIKVVD 79 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205 + P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 80 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYNEM 138 Query: 206 IE----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSIT 260 IE D G N K S+V +E P R LT +T+AEYF G +VLL +D+I Sbjct: 139 IESGIVDLKGSNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDHDGQDVLLFVDNIF 197 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ Sbjct: 198 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTNKGSITSVQAIYVPADDL 255 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD VL+R+++E YP VDPL S SR+ D Sbjct: 256 TDPAPATTFAHLDATTVLSRAISELAIYPAVDPLDSRSRMLD 297 >gi|119350505|gb|ABL63203.1| AtpB [Haematococcus lacustris] Length = 392 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 161/307 (52%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + G+ ++ I + P ++ F+TGI+V+D+ P G Sbjct: 38 LGRIFNVLGEPVDNLGPVNTGE-TLPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 96 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 97 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 156 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 157 NLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 216 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 217 SALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 274 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETR 387 + LD VL+R+LA +G YP VDPL S S + + W EK ++ + + R++E + Sbjct: 275 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSTAQNVKKTLQRYKELQ 333 Query: 388 DIRLIGG 394 DI I G Sbjct: 334 DIIAILG 340 >gi|300858267|ref|YP_003783250.1| ATP synthase subunit beta [Corynebacterium pseudotuberculosis FRC41] gi|300685721|gb|ADK28643.1| ATP synthase beta chain [Corynebacterium pseudotuberculosis FRC41] Length = 481 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + LG+ I PP + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGG 161 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTA 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 222 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI S K K +IT++ +V V D++ DP + + LD Sbjct: 282 SAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATTE 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A +G YP V+PL S SR+ + + ++ + H++ + +E +DI I G Sbjct: 340 LDRAIASKGIYPAVNPLTSTSRILEPGVVGERHYEVAQRVIHILQKNKELQDIIAILG 397 >gi|289191502|ref|YP_003457443.1| ATP synthase, B subunit [Methanocaldococcus sp. FS406-22] gi|288937952|gb|ADC68707.1| ATP synthase, B subunit [Methanocaldococcus sp. FS406-22] Length = 465 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 103/333 (30%), Positives = 167/333 (50%), Gaps = 18/333 (5%) Query: 59 LGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116 +GQV+ R L +V + G + F +I S GR+ N GKPIDG Sbjct: 46 MGQVLEAREGLAVVQVFEGTTGLSTKDTKVRFTGRTAKIGVSMEMLGRIFNGAGKPIDGG 105 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + ++I ++R+ +TGI ID L GQ++ +F+GSG+ + Sbjct: 106 PEIVP-EKELDINGYPLNPVSRKVPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQ 164 Query: 177 LLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228 L + AR + F V+ + +G E F+E++ L+++VV + +D+ Sbjct: 165 LAAQIARQAKVRGEGEKF-AVVFAAMGITSEEANFFMEEFRKTGALERAVVFINLADDPA 223 Query: 229 ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 I R + P A+T+AEY + + D +VL+IL +T + ++REI+ E+P RGYP ++ Sbjct: 224 IERILTPRIALTVAEYLAYEKDMHVLVILTDMTNYCEALREISAARNEVPGRRGYPGYMY 283 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 ++L + ER G + G IT + + + D+ PI D I +G IVL+R L +G Sbjct: 284 TDLATIYERAGRVKGRTGTITQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGI 343 Query: 348 YPPVDPLASVSRLADKAWSA-----DEKKLVSS 375 YPPVD L S+SRLA D KK+V+ Sbjct: 344 YPPVDVLPSLSRLAGNGQGPGKTREDHKKVVNQ 376 >gi|41615057|ref|NP_963555.1| hypothetical protein NEQ263 [Nanoarchaeum equitans Kin4-M] gi|40068781|gb|AAR39116.1| NEQ263 [Nanoarchaeum equitans Kin4-M] Length = 416 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 94/305 (30%), Positives = 158/305 (51%), Gaps = 7/305 (2%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 ++I+ S + G + N G+PI G + + ++ P A R+ + TGI I Sbjct: 61 YKIAVSEDYIGGIFNGFGEPIKGPKPYPEDYRDINGLAINPYA--RKVPNEILYTGISSI 118 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII-SLVGERGREVREFIEDYLG 211 D+ PL GQ+I +F+ G+ L AR+ DK II + +G + FI++++ Sbjct: 119 DVAHPLLKGQKIAIFSPPGLPMERLALQIARNVAKDKTIIFAAIGVPSDIYKMFIDEFIN 178 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269 + S + ++ +D SPI + P A+T+AEY + K +VL+++ +T +A ++REI Sbjct: 179 TKAIMNSAIFISKADSSPIEKIYTPRVALTLAEYLAFEKNRDVLVLMLDMTNYADALREI 238 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +T E+P RGYP ++++L + ER G + K G+IT + + + G++ + D Sbjct: 239 STLRKEIPSRRGYPAYLYTDLASIYERSGLTSK--GSITLIPMLTMPGNDITHVVPDLTG 296 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 I +G VL++ L + YPP+D L S+SRLA S KK L + E RDI Sbjct: 297 YITEGQYVLSQDLHSKNIYPPIDLLKSLSRLAKNGMSKKHKKYADILIKSYAKGLEARDI 356 Query: 390 RLIGG 394 I G Sbjct: 357 ATIVG 361 >gi|22298068|ref|NP_681315.1| F0F1 ATP synthase subunit beta [Thermosynechococcus elongatus BP-1] gi|81844966|sp|Q8DLG8|ATPB_THEEB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|22294246|dbj|BAC08077.1| ATP synthase beta subunit [Thermosynechococcus elongatus BP-1] Length = 482 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D ++ + ++ I P + F+TGI+VID+ TP Sbjct: 95 ATLGRIFNVLGEPVDEKGAVNATE-TLPIHRPAPSFTQLETKPSVFETGIKVIDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLGD 212 G +IG+F G+G+GK+ ++ + +S+ VGER RE E IE + D Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVID 213 Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 + K +V +E P R L+ +T+AEYF +VLL +D+I RF + Sbjct: 214 KDDPSKSKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+RSLA +G YP VDPL S S + +E + ++ + R++E Sbjct: 332 TFAHLDGTTVLSRSLAAKGIYPAVDPLGSTSNMLQPDIVGEEHYQTARAVQATLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|289665457|ref|ZP_06487038.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289668361|ref|ZP_06489436.1| F0F1 ATP synthase subunit beta [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 468 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|291615006|ref|YP_003525163.1| H(+)-transporting two-sector ATPase [Sideroxydans lithotrophicus ES-1] gi|291585118|gb|ADE12776.1| H(+)-transporting two-sector ATPase [Sideroxydans lithotrophicus ES-1] Length = 464 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 107/334 (32%), Positives = 170/334 (50%), Gaps = 22/334 (6%) Query: 43 VCLGDFVV---HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-- 97 V LGD VV H G+ + GQVIR + ++V I + +++ DL W RF P Sbjct: 25 VGLGDRVVVRDHSGRRRN--GQVIRTSNEMVLIQVLEGTDDL---DLERTWVRFLDEPFD 79 Query: 98 ---SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 S GRV N LG+P DG L + V PA R + +TG+ +D Sbjct: 80 IPLSPDILGRVFNGLGQPRDGRPPLFSKIRRNVNGAPVNPAA-RAYPREFIQTGLSAVDG 138 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIED 208 L GQ++ +F+GSG+ + L + R + V+ + +G + F E Sbjct: 139 LNSLVRGQKLPIFSGSGLPHNRLAAQIVRQARLPGEESHFAVVFAAMGVSYSDANFFKET 198 Query: 209 YLGDNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 + + ++VV+ + +DE I R + P A+T AEY + D +VL+++ +T +A ++ Sbjct: 199 FADSGVLRNVVMFLNLADEPAIERLILPRAALTTAEYLAFTLDLHVLVVMTDMTHYAEAL 258 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 RE+AT G++P +GYP ++S+L + ER G G+IT V + + D+ PI D Sbjct: 259 REVATAKGDVPARKGYPGYLYSDLAEIYERAGRIRDRHGSITMVPVLSMPSDDITHPIPD 318 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 I +G +VL+R+L +G YPPVD S+SRL Sbjct: 319 LTGYITEGQLVLSRTLNNQGIYPPVDIPPSLSRL 352 >gi|119350543|gb|ABL63222.1| AtpB [Parallela transversalis] Length = 392 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D +G + S+ I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNLGPVGNQE-SLPIHRPAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + E Sbjct: 158 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W EK ++ + R++E Sbjct: 274 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQNVKKTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|119182499|ref|XP_001242378.1| ATP synthase beta chain, mitochondrial [Coccidioides immitis RS] Length = 521 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 156/305 (51%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + KG I ++ P + + + TGI+V+D+ P G Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKLAPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARG 190 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGVMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 367 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D DE ++ + + +I ++ +DI Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGDEHYQVATRVQQMIQEYKSLQDI 427 Query: 390 RLIGG 394 I G Sbjct: 428 IAILG 432 >gi|15790972|ref|NP_280796.1| V-type ATP synthase subunit B [Halobacterium sp. NRC-1] gi|169236719|ref|YP_001689919.1| V-type ATP synthase subunit B [Halobacterium salinarum R1] gi|12229705|sp|Q9HNE4|VATB_HALSA RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|229558012|sp|B0R754|VATB_HALS3 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|10581553|gb|AAG20276.1| H+-transporting ATP synthase subunit B [Halobacterium sp. NRC-1] gi|167727785|emb|CAP14573.1| A-type ATP synthase subunit B [Halobacterium salinarum R1] Length = 471 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 99/335 (29%), Positives = 166/335 (49%), Gaps = 25/335 (7%) Query: 76 GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 G+G++ S+ F ++ + GRV++ G PIDG + D ++I+ + Sbjct: 61 GVGKDASV---RFLGETLKMPVTEDLLGRVLDGSGNPIDGGPDIVPDD-RVDIVGEAINP 116 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------- 188 R+ E+ +TG+ ID L GQ++ +F+GSG+ S L AR Sbjct: 117 HAREYPEEFIQTGVSGIDGMNTLVRGQKLPIFSGSGLPHSDLALQIARQASVPEEEAETD 176 Query: 189 -------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVT 240 V+ +G E EF++D+ L++SVV + +D+ + R + P A+T Sbjct: 177 DDEGSEFAVVFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTVTPRMALT 236 Query: 241 IAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 AEY + + D +VL+IL +T + ++R+I E+P RGYP ++++L +L ER G Sbjct: 237 TAEYLAFEKDYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYMYTDLAQLYERAGR 296 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 E ++G++T + + + GD+ PI D I +G I++NR L +G PPV+ L S+SR Sbjct: 297 IEGKEGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIMMNRDLNSQGVTPPVNVLPSLSR 356 Query: 360 LADKAWS-----ADEKKLVSSLTHLIHRFEETRDI 389 L D AD + L EE RD+ Sbjct: 357 LMDDGIGEGLTRADHGDVSDQLYAAYAEGEELRDL 391 >gi|241953968|ref|XP_002419705.1| ATP synthase subunit beta, mitochondrial precursor, putative; F1F0 ATP synthase beta subunit, putative [Candida dubliniensis CD36] gi|223643046|emb|CAX41920.1| ATP synthase subunit beta, mitochondrial precursor, putative [Candida dubliniensis CD36] Length = 504 Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 103/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID D + I ++ P + + + +TGI+V+D+ P G Sbjct: 118 LGRIINVVGEPID-DRGPIECKEKKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARG 176 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 177 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 235 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 236 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 293 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 294 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 351 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D A E + + + + ++ + Sbjct: 352 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATGVQQTLQAYKSLQ 411 Query: 388 DIRLIGG 394 DI I G Sbjct: 412 DIIAILG 418 >gi|319407766|emb|CBI81413.1| ATP synthase beta chain [Bartonella sp. 1-1C] Length = 530 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 108/363 (29%), Positives = 178/363 (49%), Gaps = 28/363 (7%) Query: 56 SDNLGQVIRINL------DIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINA 108 +DNLG + + + + V + E + G V+ G P GR++N Sbjct: 85 TDNLGNKLVLEVAQHLGENTVRTIAMDTTEGLVRGQKVYDTGAQICVPVGEATLGRIMNV 144 Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 +G+P+D D L I + P + + + TGI+VID+ P G ++G+F Sbjct: 145 IGEPVD-DAGLIMATKKRSIHQEAPQYVEQSTESEILVTGIKVIDLLAPYSKGGKVGLFG 203 Query: 169 GSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNLK----- 215 G+G+GK+ L+ + A++ V VGER RE E IE + + + Sbjct: 204 GAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVNVDPRENGST 262 Query: 216 ---KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATN 272 K +V +E P R L+ +TIAE F +G +VL +D+I RF + E++ Sbjct: 263 IGSKCALVYGQMNEPPGARARVALSGLTIAENFRDEGQDVLFFVDNIFRFTQAGAEVSAL 322 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP + + L Sbjct: 323 LGRIPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAIYVPADDLTDPAPATSFAHL 380 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391 D VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ R++ +DI Sbjct: 381 DATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHYTVACQVQTILQRYKSLQDIIA 440 Query: 392 IGG 394 I G Sbjct: 441 ILG 443 >gi|303256393|ref|ZP_07342407.1| ATP synthase F1, beta subunit [Burkholderiales bacterium 1_1_47] gi|331001480|ref|ZP_08325098.1| ATP synthase F1, beta subunit [Parasutterella excrementihominis YIT 11859] gi|302859884|gb|EFL82961.1| ATP synthase F1, beta subunit [Burkholderiales bacterium 1_1_47] gi|329568209|gb|EGG50026.1| ATP synthase F1, beta subunit [Parasutterella excrementihominis YIT 11859] Length = 467 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 159/300 (53%), Gaps = 12/300 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+P+D +G+ + M I P +TGI+VID+ P G Sbjct: 91 LGRIMDVLGRPVDEAGEIGE-EKRMPIHRAAPKFDELSPSVDLLETGIKVIDLVCPFAKG 149 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN--LK 215 ++G+F G+G+GK+ L++ A++ V VGER RE +F + +G++ L Sbjct: 150 GKVGLFGGAGVGKTVNMMELINNIAKAYGGYSVFAG-VGERTREGNDFYHE-MGESKVLD 207 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGE 275 K +V +E P R LT +T+AE F +G ++LL +D+I RF + E++ G Sbjct: 208 KVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILLFIDNIYRFTLAGTEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD Sbjct: 268 MPSAVGYQPTLAEEMGKLQERI--ASTKVGSITSIQAVYVPADDLTDPSPATTFGHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +VL+R +A G YP VDPL S SR D +E V+ + + R++E RDI I G Sbjct: 326 VVLSRDIAALGIYPAVDPLDSTSRQIDPHIIGEEHYSVTRRVQATLQRYKELRDIIAILG 385 >gi|208751250|gb|ACI31230.1| ATP synthase CF1 beta subunit [Volvox carteri] gi|261888140|gb|ACY05995.1| ATP synthase CF1 beta subunit [Volvox carteri f. nagariensis] Length = 491 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 107 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 165 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 166 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 225 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 226 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 283 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 284 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 341 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 342 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|213401042|gb|ACJ47169.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Tribolium confusum] Length = 315 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 92/272 (33%), Positives = 147/272 (54%), Gaps = 20/272 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG +E + + PP+ Q++ E+ TGI+VID+ P G Sbjct: 25 GRIFNVVGELIDECGPL-KGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDLLAPYLKG 83 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 84 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYNEMITSNVMD 141 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 142 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDHENQDVLFFVDNIFRFTQAGS 201 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP + Sbjct: 202 EISALLGRIPSAVGYQPTLATDMGAMQERI--ASTTAGSITSVQAIYVPADDLTDPAPAT 259 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 S LD VL+R +AE G YP VDPL S S+ Sbjct: 260 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQ 291 >gi|116871845|ref|YP_848626.1| F0F1 ATP synthase subunit beta [Listeria welshimeri serovar 6b str. SLCC5334] gi|123458107|sp|A0AFR1|ATPB1_LISW6 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|116740723|emb|CAK19843.1| ATP synthase F1, beta subunit [Listeria welshimeri serovar 6b str. SLCC5334] Length = 456 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 121/410 (29%), Positives = 202/410 (49%), Gaps = 32/410 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN + + IGE L G V + G + G Sbjct: 33 EYKTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGTEVVNLGHPIEVPVGESVQG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG + ++ I + P + ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGKPE-PEAEVKWPIFREQPLLRDLDTSKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215 G+F G+G+GKS L+ SM + F + VGER RE + + E L Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMMGGNSVF-----TGVGERVREGIGLYKELEASGVLS 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ++P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKD--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 IVL RS+A G +P V+PL S SR + + + +L + +++ R+ E ++I + Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPNFVGERHYQLAVQVKYVLQRYTELQEIINVL 380 Query: 394 GYRPGVDLILDKA-VHQVPIIYDFLKQ----SPSDLSSEDVFQEITKKLQ 438 G D DK VH+ I +FL Q S +E +F E+ L+ Sbjct: 381 GMAELSD--DDKNLVHRARKIRNFLSQPFYVSEKFTGTEGIFVEMEDLLE 428 >gi|2662066|dbj|BAA23688.1| proton-translocating ATPase, beta subunit [Ruminococcus albus] Length = 479 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 98/297 (32%), Positives = 156/297 (52%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LG P+D + + EI + P + + +TGI+VID+ P G + Sbjct: 90 RMFNLLGDPVDNLPAPETAE-RWEIHREPPSYEEQTAANEILETGIKVIDLIAPYLKGGK 148 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ + IS+ VGER RE + + E + K+V+ Sbjct: 149 IGLFGGAGVGKTVLIQELINNVANQHGGISVFTGVGERTREGNDLYWEMKESGVIDKTVL 208 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 209 VYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 268 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + LD VL Sbjct: 269 AVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 326 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +RS+A G +P VDPL S SR+ +E ++ + ++ R+ E +DI I G Sbjct: 327 SRSIASLGIFPAVDPLESTSRILTPEIVGNEHYQVARQVQSILQRYVELQDIIAIMG 383 >gi|116204743|ref|XP_001228182.1| ATP synthase beta chain, mitochondrial precursor [Chaetomium globosum CBS 148.51] gi|88176383|gb|EAQ83851.1| ATP synthase beta chain, mitochondrial precursor [Chaetomium globosum CBS 148.51] Length = 519 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 157/307 (51%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N G PID + K D + I ++ P +++ + TGI+V+D+ P Sbjct: 128 ATLGRIMNVTGDPIDERGPI-KTDKFLPIHAEAPEFVDQSTTAEILVTGIKVVDLLAPYA 186 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 187 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 245 Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 246 QLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSE 305 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 306 VSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATT 363 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SR+ D E + S + ++ ++ + Sbjct: 364 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYDIASRVQQILQEYKSLQ 423 Query: 388 DIRLIGG 394 DI I G Sbjct: 424 DIIAILG 430 >gi|190345407|gb|EDK37286.2| ATP synthase beta chain, mitochondrial precursor [Meyerozyma guilliermondii ATCC 6260] Length = 489 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 164/306 (53%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I ++ P + + + +TGI+V+D+ P G Sbjct: 104 LGRIINVIGEPIDERGPI-ESKQKKPIHAEPPSFVEQSTSAEVLETGIKVVDLLAPYARG 162 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 163 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 220 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 221 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEV 280 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 281 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 338 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D + +E + S++ + ++ +D Sbjct: 339 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGEEHYSVASNVQQTLQAYKSLQD 398 Query: 389 IRLIGG 394 I I G Sbjct: 399 IIAILG 404 >gi|23503629|dbj|BAC20411.1| ATP synthase beta-subunit [Haematococcus lacustris] Length = 376 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 161/307 (52%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + G+ ++ I + P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNLGPVNTGE-TLPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 150 NLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 210 SALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETR 387 + LD VL+R+LA +G YP VDPL S S + + W EK ++ + + R++E + Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSTAQNVKKTLQRYKELQ 326 Query: 388 DIRLIGG 394 DI I G Sbjct: 327 DIIAILG 333 >gi|119947323|ref|YP_945003.1| F0F1 ATP synthase subunit beta [Psychromonas ingrahamii 37] gi|190358237|sp|A1T0Y9|ATPB2_PSYIN RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|119865927|gb|ABM05404.1| ATP synthase F1, beta subunit [Psychromonas ingrahamii 37] Length = 465 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 104/344 (30%), Positives = 166/344 (48%), Gaps = 16/344 (4%) Query: 64 RINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKG 122 +I +V +G + +S G V G+ P GR++N LG+PID +G Sbjct: 44 QIGGGVVRCIAMGASDGLSRGLDVTDTGKPITVPVGTATLGRIMNVLGEPIDMCGEIGAT 103 Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 + I + P + + GI+VID+ P G +IG+F G+G+GK+ + Sbjct: 104 E-HYGIHREAPTYEEQSASVATLEVGIKVIDLICPFSKGGKIGLFGGAGVGKTVNMMELI 162 Query: 183 RSDCFDKVIISL---VGERGREVREF--------IEDYLGDNLKKSVVVVATSDESPILR 231 + +S+ VGER RE +F + + L K +V +E P R Sbjct: 163 NNIALKHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEKPELSKVAMVYGQMNEPPGNR 222 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 LT +T+AE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ Sbjct: 223 LRVALTGLTMAERFRDEGKDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMG 282 Query: 292 RLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 L ERI + + G+IT++ +V V D+ DP + + LD +VLNRS+A G YP + Sbjct: 283 VLQERI--TSTKTGSITSIQAVYVPADDLTDPAPATTFAHLDATVVLNRSIASMGLYPAI 340 Query: 352 DPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DPL S SR D E + + + R++E +DI I G Sbjct: 341 DPLDSTSRQLDPLVVGQEHYDIARGVQGTLQRYKELKDIIAILG 384 >gi|159028802|emb|CAO89973.1| atpD [Microcystis aeruginosa PCC 7806] Length = 482 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 164/323 (50%), Gaps = 16/323 (4%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D+V + C GR+ N LG+P+D + + S I P ++ + Sbjct: 79 DIVDTGAAISVPVGKCTLGRIFNVLGEPVDEKGPVNVTETS-PIHRPAPKLVDLEVTPTV 137 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGRE 201 F+TGI+VID+ TP G +IG+F G+G+GK+ ++ + +S+ G ER RE Sbjct: 138 FETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTRE 197 Query: 202 ----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252 E IE + DN + S +V +E P R L+A+T+AEYF +V Sbjct: 198 GNDLYNEMIESKVINADNPEDSKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDV 257 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LL +D+I RF + E++ G +P A GY ++ +++ L ERI + ++G+IT++ + Sbjct: 258 LLFVDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQA 315 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371 V V D+ DP + + LDG VL+R LA +G YP VDPL S S + DE Sbjct: 316 VYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLGSTSTMLQADIVGDEHYG 375 Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394 ++ + R++E +DI I G Sbjct: 376 TARAVQSTLQRYKELQDIIAILG 398 >gi|46909241|gb|AAT06138.1| ATP synthase beta subunit [Encope michelini] Length = 427 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 95/277 (34%), Positives = 149/277 (53%), Gaps = 24/277 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR++N +G+PID +G + E I ++ P + ++ TGI+V+D+ P Sbjct: 64 LGRIMNVIGEPIDE-----RGPIPTEKRAAIHAEAPEFVEMSVAQEILVTGIKVVDLLAP 118 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 119 YAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGG 177 Query: 209 --YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 178 VISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 237 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP Sbjct: 238 GSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAP 295 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 296 ATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 332 >gi|326387009|ref|ZP_08208619.1| F0F1 ATP synthase subunit beta [Novosphingobium nitrogenifigens DSM 19370] gi|326208190|gb|EGD58997.1| F0F1 ATP synthase subunit beta [Novosphingobium nitrogenifigens DSM 19370] Length = 481 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 144/276 (52%), Gaps = 20/276 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G PID + +G D+ I +K P + + TGI+VID+ P G Sbjct: 89 LGRILNVVGDPIDDNGPVG-ADMFAPIHAKAPEFIEQSTEAAILVTGIKVIDLLAPYAKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + +S+ VGER RE + ++L + Sbjct: 148 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKD 207 Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 K +V +E P R L+ +T+AEYF +G +VL +D+I RF Sbjct: 208 AEGNATSDGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQ 267 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ +L ERI + KG+IT+V ++ V D+ DP Sbjct: 268 AGSEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTTKGSITSVQAIYVPADDLTDPA 325 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + LD L+RS+AE G YP VDPL S SR+ Sbjct: 326 PAASFAHLDATTTLSRSIAELGIYPAVDPLDSTSRV 361 >gi|312892092|ref|ZP_07751592.1| ATP synthase F1 subcomplex beta subunit [Mucilaginibacter paludis DSM 18603] gi|311295464|gb|EFQ72633.1| ATP synthase F1 subcomplex beta subunit [Mucilaginibacter paludis DSM 18603] Length = 501 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 164/330 (49%), Gaps = 42/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR++N +G+ IDG D L I +K PP + E + TGI+VID+ P G Sbjct: 89 GRLLNVVGQAIDGIDQL-DNSAGAPIHAK-PPRFDELSTETEVLFTGIKVIDLIEPYAKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +REFIE + G Sbjct: 147 GKIGLFGGAGVGKTVLIMELVNNIAKAYAGLSVFAGVGERTREGNDLLREFIESNVINYG 206 Query: 212 DNLK---------------------KSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D K K+ +V +E P R L+ +T+AEY+ Sbjct: 207 DAFKHSMEEGGWDLSVVDKEKLKESKATLVFGQMNEPPGARARVALSGLTVAEYYRDGDG 266 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 267 EGQGKDILFFVDNIFRFTQAGAEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTKRG 324 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD L+R +AE G YP VDPL S SR+ A Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTSLSRKIAELGIYPAVDPLDSTSRILSAAI 384 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + ++ R++E +DI I G Sbjct: 385 LGDEHYNTAQRVKEILQRYKELQDIIAILG 414 >gi|254486561|ref|ZP_05099766.1| ATP synthase F1, beta subunit [Roseobacter sp. GAI101] gi|214043430|gb|EEB84068.1| ATP synthase F1, beta subunit [Roseobacter sp. GAI101] Length = 479 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+ ID + + I + P + + +TGI+VID+ P Sbjct: 89 ATLGRIMNVVGEAIDEKGEIASAE-RRSIHADAPEFAEQSTSSEVLETGIKVIDLLAPYA 147 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + Sbjct: 148 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESNV 205 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 D+L+KS V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 206 INPDDLEKSQVALVYGQMNEPPGARMRVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 265 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + + G+IT+V +V V D+ DP Sbjct: 266 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKAGSITSVQAVYVPADDLTDPAP 323 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+RS++E+G YP VDPL S SRL D + +E V+ + ++ R++ Sbjct: 324 ATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLMDPSIVGEEHYNVARDVQGVLQRYK 383 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 384 SLQDIIAILG 393 >gi|146419503|ref|XP_001485713.1| ATP synthase beta chain, mitochondrial precursor [Meyerozyma guilliermondii ATCC 6260] Length = 489 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 164/306 (53%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I ++ P + + + +TGI+V+D+ P G Sbjct: 104 LGRIINVIGEPIDERGPI-ESKQKKPIHAEPPSFVEQSTSAEVLETGIKVVDLLAPYARG 162 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + N Sbjct: 163 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV-IN 220 Query: 214 LK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 L+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 221 LEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEV 280 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 281 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 338 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D + +E + S++ + ++ +D Sbjct: 339 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGEEHYSVASNVQQTLQAYKSLQD 398 Query: 389 IRLIGG 394 I I G Sbjct: 399 IIAILG 404 >gi|42525218|ref|NP_970598.1| F0F1 ATP synthase subunit beta [Bdellovibrio bacteriovorus HD100] gi|81829096|sp|Q6MGM7|ATPB_BDEBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|39577429|emb|CAE81252.1| ATP synthase beta chain [Bdellovibrio bacteriovorus HD100] Length = 468 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 96/301 (31%), Positives = 153/301 (50%), Gaps = 13/301 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+PID +G + + I P ++ TGI+V+D+ P Sbjct: 90 LGRIINVVGEPID---EMGPVNAKEQWGIHRTAPKFEDQATAAAMLMTGIKVVDLLAPYA 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ R+ + + + VGER RE + ++ L Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELIRNIATEHGGFSVFAGVGERTREGNDLWQEMKQSGVLA 206 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF + +VL +D+I RF + E++ G Sbjct: 207 KTSLVFGQMNEPPGARARVALTGLTVAEYFRDVENQDVLFFVDNIFRFTQAGAEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ L ERI + +KG+IT+V +V V D++ DP + + LD Sbjct: 267 RIPSAVGYQPTLATEMGTLQERI--TSTKKGSITSVQAVYVPADDYTDPAPATTFTHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 L+R +A +P V PL S SRL D +E K + L+ R E +DI I Sbjct: 325 TTNLDRDIAAMAIFPAVHPLTSTSRLLDPTVIGEEHYKCARDVQALLQRNRELQDIIAIL 384 Query: 394 G 394 G Sbjct: 385 G 385 >gi|296119532|ref|ZP_06838090.1| ATP synthase F1, beta subunit [Corynebacterium ammoniagenes DSM 20306] gi|295967415|gb|EFG80682.1| ATP synthase F1, beta subunit [Corynebacterium ammoniagenes DSM 20306] Length = 481 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 102/299 (34%), Positives = 168/299 (56%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D + LG+ D + + PPA ++ + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF +G +VLL +D+I RF + E++T G + Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGRM 280 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI S K K +IT++ +V V D++ DP + + LD Sbjct: 281 PSAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATT 338 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L+R++A +G YP V+PL S SR+ + + + V+ + +++ + +E +DI I G Sbjct: 339 ELDRAIASKGIYPAVNPLTSTSRILEPSIVGERHYAVAQRVINILQKNKELQDIIAILG 397 >gi|156619211|gb|ABU88284.1| ATP synthase CF1 beta subunit [Chlamydomonas moewusii] Length = 508 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + D ++ I K P ++ F+TGI+V+D+ P G Sbjct: 124 LGRIFNVLGEPVDNMGPVKVED-TLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 182 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 183 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 242 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 243 NLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 300 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 301 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 358 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W +K + ++ + R++E Sbjct: 359 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGDKHYQTAQNVKKTLQRYKE 417 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 418 LQDIIAILG 426 >gi|256380129|ref|YP_003103789.1| F0F1 ATP synthase subunit beta [Actinosynnema mirum DSM 43827] gi|255924432|gb|ACU39943.1| ATP synthase F1, beta subunit [Actinosynnema mirum DSM 43827] Length = 478 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 97/302 (32%), Positives = 162/302 (53%), Gaps = 17/302 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D LG+ I K P + + +TGI+VID+ TP G Sbjct: 100 GHVFNALGDCLD-SPGLGRDGEQWGIHRKAPSFDQLEGKTEILETGIKVIDLLTPYVKGG 158 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-----LGDNL 214 +IG+F G+G+GK+ L+ M R + + + VGER RE + + + LGD Sbjct: 159 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLLLEMEEMGVLGD-- 216 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 217 --TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLL 274 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + + +IT++ ++ V D++ DP + + LD Sbjct: 275 GRMPSAVGYQPTLADEMGELQERITSTRGK--SITSLQAIYVPADDYTDPAPATTFAHLD 332 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 L+R ++++G YP VDPL+S SR+ + + +E ++ + ++ +++E +DI I Sbjct: 333 ATTELSRPISQKGIYPAVDPLSSSSRILEPSIVGEEHYRVAQEVKRILQKYKELQDIIAI 392 Query: 393 GG 394 G Sbjct: 393 LG 394 >gi|108773085|ref|YP_635994.1| ATP synthase CF1 beta subunit [Scenedesmus obliquus] gi|118573743|sp|Q1KVT0|ATPB_SCEOB RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|88696651|gb|ABD48277.1| CF1 beta subunit of ATP synthase [Scenedesmus obliquus] Length = 480 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 160/310 (51%), Gaps = 26/310 (8%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG K + S+ I P ++ F+TGI+V+D+ P Sbjct: 97 GRIFNVLGEPVD---NLGPVKNEESLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRR 153 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IE 207 G +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 154 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVE 213 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 214 KNLIDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAG 271 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 272 AEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 329 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W EK S+ + R++ Sbjct: 330 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEKHYGCAQSVKRTLQRYK 388 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 389 ELQDIIAILG 398 >gi|260584616|ref|ZP_05852362.1| ATP synthase F1, beta subunit [Granulicatella elegans ATCC 700633] gi|260157639|gb|EEW92709.1| ATP synthase F1, beta subunit [Granulicatella elegans ATCC 700633] Length = 480 Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 96/299 (32%), Positives = 151/299 (50%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG ID + + EI P + +TGI+VID+ P G Sbjct: 97 LGRVFNVLGDTIDLGEKFPEDFRRDEIHKPAPKFEQLSSQYEILQTGIKVIDLLAPYLKG 156 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLK-KS 217 +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + K+ Sbjct: 157 GKIGLFGGAGVGKTVLIQELIHNIAEELGGISVFTGVGERTREGNDLYHEMQDSGVSAKT 216 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +TIAE+F + +VLL +D+I RF + E++ G + Sbjct: 217 AMVFGQMNEPPGARMRVALTGLTIAEHFRDEQKQDVLLFIDNIYRFTQAGSEVSALLGRM 276 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI S + G+IT++ ++ V D++ DP + + LD Sbjct: 277 PSAVGYQPTLATEMGQLQERI--SSTKDGSITSIQAIYVPADDYTDPAPATTFAHLDATT 334 Query: 337 VLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L R L E+G YP VDPLAS S L + ++ + ++ R+ E +DI I G Sbjct: 335 NLERRLTEQGIYPAVDPLASTSSALTPDIVGEEHYEVAMKVQQMLQRYRELQDIIAILG 393 >gi|119350445|gb|ABL63173.1| AtpB [Ankyra judayi] Length = 392 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + D S+ I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNMGPVNN-DESLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE-------VRE---FIEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMRESGVIVEKN 157 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R L A+T+AEYF +VL +D+I RF + E Sbjct: 158 LADS--KVALVYGQMNEPPGARMRVALPALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 274 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYSCAQSIKKTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|93007151|ref|YP_581588.1| F0F1 ATP synthase subunit beta [Psychrobacter cryohalolentis K5] gi|118573727|sp|Q1Q899|ATPB_PSYCK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|92394829|gb|ABE76104.1| ATP synthase F1, beta subunit [Psychrobacter cryohalolentis K5] Length = 477 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 28/315 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID + + + D I + P + + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPIDEEGPV-QADERWSIHREAPSYAEQSNSTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF-----------IE 207 ++G+F G+G+GK+ + + +S+ VGER RE +F E Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIALKHEGLSVFAGVGERTREGNDFYHEMQEAGVVNTE 201 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-------SSKGDNVLLILDSIT 260 D+ + K +V +E P R L+ +T+AEYF + KG +VLL +D+I Sbjct: 202 DF---SKSKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDTKDPATGKGRDVLLFVDNIY 258 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ Sbjct: 259 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGMLQERI--TSTQSGSITSVQAVYVPADDL 316 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD +VL+R +A +G YP VDPL S SR D +E V+ + + Sbjct: 317 TDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPLVIGEEHYNVARGVQEV 376 Query: 380 IHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 377 LQRYKELKDIIAILG 391 >gi|302205988|gb|ADL10330.1| F0F1 ATP synthase subunit beta [Corynebacterium pseudotuberculosis C231] Length = 481 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + LG+ I PP + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGG 161 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTA 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 222 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI S K K +IT++ +V V D++ DP + + LD Sbjct: 282 SAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATTE 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A +G YP V+PL S SR+ + + ++ + H++ + +E +DI I G Sbjct: 340 LDRTIASKGIYPAVNPLTSTSRILEPGVVGERHYEVAQRVIHILQKNKELQDIIAILG 397 >gi|241761493|ref|ZP_04759581.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241374400|gb|EER63897.1| ATP synthase F1, beta subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 484 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 97/319 (30%), Positives = 162/319 (50%), Gaps = 21/319 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ GR++N +G+P+D +G +M I + PP + TGI+VID Sbjct: 83 RVPVGPETLGRIMNVVGRPVDERGPIGSKQ-TMPIHADAPPFTEQSTDTAILTTGIKVID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFI 206 + P G ++G+F G+G+GK+ L+ + + + VGER RE EF+ Sbjct: 142 LLAPYSKGGKVGLFGGAGVGKTVLIQELINNIAKGHGGFSVFAGVGERTREGNDLYHEFL 201 Query: 207 E------DYLGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 E D G+ + K +V +E P R L+ +T+AEYF +G +VL + Sbjct: 202 EAGVIASDKDGNAISEGSKVALVYGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFV 261 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ +L ERI + +KG+IT+V ++ V Sbjct: 262 DNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTKKGSITSVQAIYVP 319 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375 D+ DP + + LD VL+R+++E G YP VDPL S SR + DE + Sbjct: 320 ADDLTDPAPAASFAHLDATTVLSRAISEMGIYPAVDPLDSSSRNLEPRIVGDEHYQTARD 379 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 380 VQEILQHYKNLQDIIAILG 398 >gi|71082935|ref|YP_265654.1| F0F1 ATP synthase subunit beta [Candidatus Pelagibacter ubique HTCC1062] gi|91762641|ref|ZP_01264606.1| F1-ATP Synthase Beta Chain [Candidatus Pelagibacter ubique HTCC1002] gi|118573715|sp|Q4FP38|ATPB_PELUB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71062048|gb|AAZ21051.1| F1-ATP Synthase Beta Chain [Candidatus Pelagibacter ubique HTCC1062] gi|91718443|gb|EAS85093.1| F1-ATP Synthase Beta Chain [Candidatus Pelagibacter ubique HTCC1002] Length = 472 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 158/308 (51%), Gaps = 23/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR+IN +G+PID KG++ + + + P + Q E TGI+V+D+ P Sbjct: 85 GRIINVIGEPIDE-----KGEVKTKEKWPIHRAAPEFSDQSTETEILVTGIKVVDLLAPY 139 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ + + + VGER RE + + + + Sbjct: 140 AKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMIDSGVI 199 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 K+ +V +E P R LT +T+AEYF +G +VL +D+I RF + Sbjct: 200 KPEGPGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLFFVDNIFRFTQAGS 259 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + Sbjct: 260 EVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKGSITSVQAIYVPADDLTDPAPAT 317 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R +AE G YP VDPL S SR+ D DE ++ + ++ ++ Sbjct: 318 SFAHLDATTVLSRQIAEIGIYPAVDPLDSTSRILDPRIVGDEHYRVAREVQKILQTYKSL 377 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 378 QDIIAILG 385 >gi|23503595|dbj|BAC20394.1| ATP synthase beta-subunit [Chloromonas asteroidea] gi|23503599|dbj|BAC20396.1| ATP synthase beta-subunit [Chlamydomonas mutabilis] Length = 376 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAETTLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKDGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APSVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYSVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 321 RYKELQDIIAILG 333 >gi|215400698|ref|YP_002327459.1| ATP synthase CF1 subunit b [Vaucheria litorea] gi|194441148|gb|ACF70876.1| ATP synthase CF1 subunit b [Vaucheria litorea] Length = 473 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 160/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG+ G ++ I + P + + F+TGI+V+D+ P Sbjct: 88 VTLGRIFNILGEPVD---NLGEISGAPTLPIHREAPSFTDLETTPSIFETGIKVVDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G RE + Y+ Sbjct: 145 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVEERTREGNDLYMEMKESGV 204 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +NL +S V V +E P R L+A+T+AEYF +VLL +D+I RF + Sbjct: 205 IQANNLTESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDINNQDVLLFIDNIFRFVQA 264 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 265 GSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTTQGSITSIQAVYVPADDLTDPAP 322 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + ++ E K ++ + R++ Sbjct: 323 ATTFAHLDTTTVLSRGLAAKGIYPAVDPLDSTSTMLQESIVGTEHYKTAQAVKETLQRYK 382 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 383 ELQDIIAILG 392 >gi|301632657|ref|XP_002945398.1| PREDICTED: ATP synthase subunit beta-like [Xenopus (Silurana) tropicalis] Length = 469 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 99/303 (32%), Positives = 156/303 (51%), Gaps = 17/303 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID + + L I K P ++ +TGI+VID+ P Sbjct: 83 ATLGRIMDVLGNPIDERGPVDQ-TLRASIHRKAPAYDELSPSQELLETGIKVIDLVCPFA 141 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 142 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSGVV 200 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 +NL +S V V +E P R LT +TIAE F +G +VL +D+I R+ + Sbjct: 201 NLENLGESKVSMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGT 260 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 261 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 318 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD +VL+R +A G YP VDPL S SR D +E ++ + + R++E Sbjct: 319 TFAHLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGEEHYRVARDVQGTLQRYKEL 378 Query: 387 RDI 389 RDI Sbjct: 379 RDI 381 >gi|159466892|ref|XP_001691632.1| beta subunit of mitochondrial ATP synthase [Chlamydomonas reinhardtii] gi|584796|sp|P38482|ATPBM_CHLRE RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|18123|emb|CAA43808.1| H(+)-transporting ATP synthase [Chlamydomonas reinhardtii] gi|158278978|gb|EDP04740.1| beta subunit of mitochondrial ATP synthase [Chlamydomonas reinhardtii] Length = 574 Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 159/306 (51%), Gaps = 17/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + ++ I + P + ++ TGI+V+D+ P G Sbjct: 119 GRIMNVIGEPVDEQGPIECSEV-WSIHREAPEFTEQSTEQEILVTGIKVVDLLAPYQRGG 177 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLGD 212 +IG+F G+G+GK+ L+ + + + VGER RE RE IE LGD Sbjct: 178 KIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGD 237 Query: 213 NL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 238 KRGESKCTLVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFVDNIFRFTQANSEV 297 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + Sbjct: 298 SALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTF 355 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE G YP VDPL S SR+ + A+ + + ++ ++ +D Sbjct: 356 AHLDATTVLSRSIAELGIYPAVDPLDSTSRMLNPNIIGAEHYNIARGVQKVLQDYKNLQD 415 Query: 389 IRLIGG 394 I I G Sbjct: 416 IIAILG 421 >gi|330813464|ref|YP_004357703.1| ATP synthase beta chain [Candidatus Pelagibacter sp. IMCC9063] gi|327486559|gb|AEA80964.1| ATP synthase beta chain [Candidatus Pelagibacter sp. IMCC9063] Length = 474 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 100/330 (30%), Positives = 166/330 (50%), Gaps = 18/330 (5%) Query: 79 EEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 E + GD V + G R+ GR++N +G+PID + K + I P + Sbjct: 62 EGLKRGDKVTNTGSSIRVPVGPETLGRIMNVIGEPIDERGPI-KTKENWPIHRAAPSFVE 120 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIIS 193 + + TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V Sbjct: 121 QSTETEVLVTGIKVVDLLAPYSRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG 180 Query: 194 LVGERGREVREFIEDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYF- 245 VGER RE + + + + K+ +V +E P R L+ +T+AEYF Sbjct: 181 -VGERTREGNDLYHEMMESGVIKLDGPGSKAALVYGQMNEPPGARARVALSGLTVAEYFR 239 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +++ L ERI + KG Sbjct: 240 DQEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TTTNKG 297 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V ++ V D+ DP + + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 298 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPRI 357 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE ++ + ++ ++ +DI I G Sbjct: 358 VGDEHYRVAREVQEILQTYKSLQDIIAILG 387 >gi|163869185|ref|YP_001610437.1| F0F1 ATP synthase subunit beta [Bartonella tribocorum CIP 105476] gi|190358258|sp|A9IYW6|ATPB_BART1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|161018884|emb|CAK02442.1| ATP synthase beta chain [Bartonella tribocorum CIP 105476] Length = 541 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 160/313 (51%), Gaps = 22/313 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + I + P + + V + TGI+V+D+ P Sbjct: 147 ATLGRIMNVIGEPVDNVGPIASTK-TRSIHQEAPEYVEQSTVSEILVTGIKVVDLLAPYS 205 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 206 KGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESGVN 264 Query: 212 DNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 N K K +V +E P R L+ +TIAE F +G +VL +D+I RF Sbjct: 265 VNPKENNGSTEGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRF 324 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ D Sbjct: 325 TQAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKIGSITSVQAIYVPADDLTD 382 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381 P + + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ Sbjct: 383 PAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHYTVACQVQTILQ 442 Query: 382 RFEETRDIRLIGG 394 R+ +DI I G Sbjct: 443 RYRALQDIIAILG 455 >gi|71066578|ref|YP_265305.1| F0F1 ATP synthase subunit beta [Psychrobacter arcticus 273-4] gi|118573726|sp|Q4FQ37|ATPB_PSYA2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71039563|gb|AAZ19871.1| ATP synthase F1, beta subunit [Psychrobacter arcticus 273-4] Length = 477 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 28/315 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID + + + D I + P + + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPIDEEGPV-EADERWSIHREAPSYAEQSNSTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF-----------IE 207 ++G+F G+G+GK+ + + +S+ VGER RE +F E Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIALKHEGLSVFAGVGERTREGNDFYHEMQEAGVVNTE 201 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-------SSKGDNVLLILDSIT 260 D+ + K +V +E P R L+ +T+AEYF + KG +VLL +D+I Sbjct: 202 DF---SKSKVAMVYGQMNEPPGNRLRVALSGLTMAEYFRDTKDPATGKGRDVLLFVDNIY 258 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ Sbjct: 259 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGMLQERI--TSTQSGSITSVQAVYVPADDL 316 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD +VL+R +A +G YP VDPL S SR D +E V+ + + Sbjct: 317 TDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPLVIGEEHYNVARGVQEV 376 Query: 380 IHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 377 LQRYKELKDIIAILG 391 >gi|84500100|ref|ZP_00998366.1| ATP synthase subunit B [Oceanicola batsensis HTCC2597] gi|84392034|gb|EAQ04302.1| ATP synthase subunit B [Oceanicola batsensis HTCC2597] Length = 467 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 25/332 (7%) Query: 78 GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 G+E++ D G + GR++N +G+P+D + + D I + P + Sbjct: 60 GQEVTDTD-----GPISVPVGTATLGRILNVIGEPVDEKGPV-EADEFRPIHAPAPDFAD 113 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----II 192 + + TGI+VID+ P G +IG+F G+G+GK+ L+ + KV + Sbjct: 114 QATEAEVLVTGIKVIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGLSVF 171 Query: 193 SLVGERGRE----VREFIED--YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEY 244 + VGER RE E IE DNL S +V +E P R LT +T+AE Sbjct: 172 AGVGERTREGNDLYHEMIESGVLTPDNLPDSKIALVYGQMNEPPGARARIALTGLTLAEQ 231 Query: 245 F-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F + G +VL +D+I RF + E++ G +P A GY ++ +++ + ERI + + Sbjct: 232 FRDATGTDVLFFVDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGAMQERI--TSTK 289 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT++ +V V D+ DP + + LD VLNR+++E G YP VDPL S SRL D Sbjct: 290 NGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDP 349 Query: 364 AWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +E V+ + ++ R++ +DI I G Sbjct: 350 QIVGEEHYQVARDVQGILQRYKSLQDIIAILG 381 >gi|325266848|ref|ZP_08133519.1| ATP synthase F1 sector beta subunit [Kingella denitrificans ATCC 33394] gi|324981589|gb|EGC17230.1| ATP synthase F1 sector beta subunit [Kingella denitrificans ATCC 33394] Length = 465 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG P+D +G D + I P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPVDEAGPIGS-DQTRAIHQPAPKFDELSSTTELLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +++AE+F + KG +VL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD +VL+R +A G YP VDPL S SR D E V+ + + +++E R Sbjct: 317 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELR 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|302330541|gb|ADL20735.1| F0F1 ATP synthase subunit beta [Corynebacterium pseudotuberculosis 1002] gi|308276223|gb|ADO26122.1| F0F1 ATP synthase subunit beta [Corynebacterium pseudotuberculosis I19] Length = 481 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + LG+ I PP + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGG 161 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTA 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 222 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI S K K +IT++ +V V D++ DP + + LD Sbjct: 282 SAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATTE 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A +G YP V+PL S SR+ + + ++ + H++ + +E +DI I G Sbjct: 340 LDRAIASKGIYPAVNPLTSTSRILEPGVVGERHYEVAQRVIHILQKNKELQDIIAILG 397 >gi|296393129|ref|YP_003658013.1| ATP synthase F1 subunit beta [Segniliparus rotundus DSM 44985] gi|296180276|gb|ADG97182.1| ATP synthase F1, beta subunit [Segniliparus rotundus DSM 44985] Length = 482 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG D D+ G G D + + PPA ++ + + +TGI+VID+ TP Sbjct: 104 GHVFNALG---DCLDTPGAGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 160 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ Sbjct: 161 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLKLEMEEMGVLQD 220 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G Sbjct: 221 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGR 280 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 281 MPSAVGYQPTLADEMGQLQERI--TSTRGRSITSLQAIYVPADDYTDPAPATTFAHLDAT 338 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +++ G YP VDPL S SR+ + + DE ++ + + ++ +++E +DI I G Sbjct: 339 TELSRPISQLGIYPAVDPLTSTSRILEASIVGDEHFRVANEVKRILQKYKELQDIIAILG 398 >gi|14020807|dbj|BAB47548.1| ATP synthase beta-subunit [Eudorina elegans] Length = 376 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYESAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|4519336|dbj|BAA75583.1| ATP synthase beta-subunit [Pandorina unicocca] Length = 376 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PID ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPIDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFVDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|24460025|dbj|BAC22613.1| F1-ATPase beta subunit [Synechococcus sp. PCC 7002] Length = 483 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 159/306 (51%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D +G + S I P F+TGI+V+D+ TP G Sbjct: 96 LGRIFNVLGEPVDEKGEVGAEETS-PIHRPAPKLTELDTAPSVFETGIKVVDLLTPYRRG 154 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL--GD 212 +IG+F G+G+GK+ ++ + + +S+ VGER RE E IE + D Sbjct: 155 GKIGLFGGAGVGKTVIMMELINNIATNHGGVSVFAGVGERTREGNDLYNEMIESGVINPD 214 Query: 213 NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL S +V +E P R L+ +T+AEYF +VLL +D+I RF + E+ Sbjct: 215 NLNDSKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGSEV 274 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 275 SALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVLADDLTDPAPATTF 332 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388 + LDG VL+R+LA +G YP VDPL S S + + D ++ + R++E +D Sbjct: 333 AHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPSIVGEDHYNTARAVQSTLQRYKELQD 392 Query: 389 IRLIGG 394 I I G Sbjct: 393 IIAILG 398 >gi|296138982|ref|YP_003646225.1| ATP synthase F1 subunit beta [Tsukamurella paurometabola DSM 20162] gi|296027116|gb|ADG77886.1| ATP synthase F1, beta subunit [Tsukamurella paurometabola DSM 20162] Length = 481 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D LG+ I K PPA ++ + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-TPGLGRDGEQWGIHRK-PPAFDQLEGKTEILETGIKVIDLLTPYVKG 160 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ + Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQDT 220 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 221 ALVFGQMDEPPGTRMRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRM 280 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI ++ +IT++ ++ V D++ DP + + LD Sbjct: 281 PSAVGYQPTLADEMGELQERITSTKGR--SITSLQAIYVPADDYTDPAPATTFAHLDATT 338 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +++ G YP VDPL S SR+ + + DE ++ + + ++ +++E +DI I G Sbjct: 339 ELSRPISQLGIYPAVDPLTSTSRILEASIVGDEHFRVANEVKRILQKYKELQDIIAILG 397 >gi|23503641|dbj|BAC20417.1| ATP synthase beta-subunit [Characiochloris sasae] Length = 376 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 162/311 (52%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + ++ I + P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NLGPVEANETLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R+ Sbjct: 264 ATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSCAQSVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|50424093|ref|XP_460631.1| DEHA2F06226p [Debaryomyces hansenii CBS767] gi|49656300|emb|CAG88959.1| DEHA2F06226p [Debaryomyces hansenii] Length = 503 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + K I + P + + + +TGI+V+D+ P G Sbjct: 117 LGRIINVIGEPIDERGPI-KTKQKNPIHADPPSFVEQSTSSEVLETGIKVVDLLAPYARG 175 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 176 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFAG-VGERTREGNDLYREMQETGVINL 234 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 235 EGDS--KVSLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIYRFTQAGSE 292 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 293 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 350 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D A E + S + + ++ + Sbjct: 351 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDIAVVGKEHYDVASGVQQTLQAYKSLQ 410 Query: 388 DIRLIGG 394 DI I G Sbjct: 411 DIIAILG 417 >gi|46909269|gb|AAT06152.1| ATP synthase beta subunit [Priapulus caudatus] Length = 427 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 94/277 (33%), Positives = 149/277 (53%), Gaps = 24/277 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR++N +G+PID +G ++ + I ++ P ++ +TGI+V+D+ P Sbjct: 64 LGRIMNVIGEPIDE-----RGPITTKHKASIHAEAPEFAEMSTEQEILETGIKVVDLLAP 118 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 119 YVKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESG 177 Query: 209 --YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 L D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 178 VISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQA 237 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP Sbjct: 238 GSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAP 295 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + + LD VL+R +AE G YP VDPL S+SR+ D Sbjct: 296 ATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMD 332 >gi|68536420|ref|YP_251125.1| F0F1 ATP synthase subunit beta [Corynebacterium jeikeium K411] gi|260577553|ref|ZP_05845492.1| ATP synthase F1, beta subunit [Corynebacterium jeikeium ATCC 43734] gi|118573523|sp|Q4JUK0|ATPB_CORJK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|68264019|emb|CAI37507.1| ATP synthase beta chain [Corynebacterium jeikeium K411] gi|258604277|gb|EEW17515.1| ATP synthase F1, beta subunit [Corynebacterium jeikeium ATCC 43734] Length = 481 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D + LG+ D + + PPA ++ + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 281 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 338 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+A +G YP V+PL S SR+ + + ++ + H++ + +E +DI I G Sbjct: 339 ELDRSIASKGIYPAVNPLTSTSRILEPGIVGERHYEVAQRVIHILQKNKELQDIIAILG 397 >gi|293189734|ref|ZP_06608450.1| ATP synthase F1, beta subunit [Actinomyces odontolyticus F0309] gi|292821324|gb|EFF80267.1| ATP synthase F1, beta subunit [Actinomyces odontolyticus F0309] Length = 482 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 149/273 (54%), Gaps = 9/273 (3%) Query: 129 MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PPA ++ K F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 127 IHRQPPAFDQLEARTKMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 186 Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D +S+ VGER RE + I E K+ +V DE P R LT +T+AE Sbjct: 187 DHGGVSVFAGVGERTREGNDLIGEMEEAGVFDKTALVFGQMDEPPGTRLRIALTGLTMAE 246 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 247 YFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGLLQERI--TSA 304 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPLAS SR+ D Sbjct: 305 GGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIAAKGIYPAVDPLASTSRILD 364 Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 A E V++ + ++ + +E +DI I G Sbjct: 365 PALVGREHYDVATHVKAILQKNKELQDIIAILG 397 >gi|254452564|ref|ZP_05066001.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 238] gi|198266970|gb|EDY91240.1| ATP synthase F1, beta subunit [Octadecabacter antarcticus 238] Length = 474 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N G P+D + K D I + P ++ + TGI+VID+ P Sbjct: 84 ATLGRILNVTGDPVDEKGPV-KTDQRRSIHGEAPKFEDQSTATEILVTGIKVIDLLAPYT 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG--- 211 G +IG+F G+G+GK+ L+ + KV + + VGER RE + + + Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGVSVFAGVGERTREGNDLYHEMIESGV 200 Query: 212 ---DNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 DNL++S +V +E P R LT +++AE F G +VL +D+I RF + Sbjct: 201 INLDNLEESKIALVYGQMNEPPGARMRIALTGLSLAEQFRDDSGSDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + G+IT+V +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERIASTRG--GSITSVQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R+++E+G YP VDPL S SRL D +E K+ + + ++ R++ Sbjct: 319 ATSFAHLDATTVLDRAISEKGIYPAVDPLGSTSRLLDPLIIGEEHYKVATDVQQILQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|325117227|emb|CBZ52779.1| ATP synthase subunit beta, related [Neospora caninum Liverpool] Length = 561 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 29/315 (9%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCH 160 GR++N +G+P+D + K S+ + P Q E G +TGI+V+D+ P Sbjct: 165 GRIMNVIGEPVDECGPVPAKKTYSIH---RAAPLFADQSTEPGLLQTGIKVVDLLAPYAK 221 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK T+L M ++ +K + + VGER RE + + + + Sbjct: 222 GGKIGLFGGAGVGK-TVLIMELINNVANKHGGFSVFAGVGERTREGNDLYHEMMTTGVIK 280 Query: 215 -------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 K+ +V +E P R LTA+++AEYF +G +VLL +D+I Sbjct: 281 RKKLEDGKFDFTGSKAALVYGQMNEPPGARARVALTALSVAEYFRDEQGQDVLLFIDNIY 340 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ ++L +L ERI + +KG+IT+V +V V D+ Sbjct: 341 RFTQAGSEVSALLGRIPSAVGYQPTLATDLGQLQERI--TTTKKGSITSVQAVYVPADDL 398 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR LA + + + L Sbjct: 399 TDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLAPEIVGQEHYDTARATQKL 458 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 459 LQDYKSLQDIIAILG 473 >gi|154509262|ref|ZP_02044904.1| hypothetical protein ACTODO_01787 [Actinomyces odontolyticus ATCC 17982] gi|153798896|gb|EDN81316.1| hypothetical protein ACTODO_01787 [Actinomyces odontolyticus ATCC 17982] Length = 482 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 149/273 (54%), Gaps = 9/273 (3%) Query: 129 MSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PPA ++ K F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 127 IHRQPPAFDQLEARTKMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 186 Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D +S+ VGER RE + I E K+ +V DE P R LT +T+AE Sbjct: 187 DHGGVSVFAGVGERTREGNDLIGEMEEAGVFDKTALVFGQMDEPPGTRLRIALTGLTMAE 246 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 247 YFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGLLQERI--TSA 304 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPLAS SR+ D Sbjct: 305 GGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIAAKGIYPAVDPLASTSRILD 364 Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 A E V++ + ++ + +E +DI I G Sbjct: 365 PALVGREHYDVATHVKAILQKNKELQDIIAILG 397 >gi|32476317|ref|NP_869311.1| F0F1 ATP synthase subunit beta [Rhodopirellula baltica SH 1] gi|81835208|sp|Q7UFB5|ATPB_RHOBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|32446862|emb|CAD78768.1| H+-transporting ATP synthase beta chain [Rhodopirellula baltica SH 1] Length = 479 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 112/333 (33%), Positives = 178/333 (53%), Gaps = 23/333 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LG+PID + + D I + PP + F+TGI+V+D+ TP G Sbjct: 94 GRVFNVLGQPIDKRGDV-QADDYWPIHRQAPPVNELSTNTELFETGIKVVDLLTPFVRGG 152 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLGDN-- 213 + G+F G+G+GK+ +L+ + AR S + + VGER RE E E +G Sbjct: 153 KAGLFGGAGLGKTVILTELIARIASSHGGYSVFAGVGERTREGTDLWLEMQETEIGSTGR 212 Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 ++++ +V +E P R L+A+T+AEYF + G + LL +D+I RF+ + E++ Sbjct: 213 NVIEQTCMVFGQMNEPPGSRLRVALSALTMAEYFRDTTGADTLLFVDNIFRFSQAGSEVS 272 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G IT+V +V V D+ DP + Sbjct: 273 ALLGRMPSAVGYQPTLATEMGALQERI--TSTKQGAITSVQAVYVPADDPTDPAPATAFG 330 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD I L RS++E+G YP +DPLAS SR+ D + D ++ + ++ R+ E +DI Sbjct: 331 QLDAFIYLERSISEKGIYPAIDPLASNSRILDPQYVGDRHYTIARRVQTILQRYRELQDI 390 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I GVD + ++ VH+ I FL Q Sbjct: 391 IAI----LGVDELSEEDKTIVHRARRIERFLSQ 419 >gi|327327363|gb|EGE69139.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL103PA1] Length = 489 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 10/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 G V N G ++ D S+ + I + PPA + E + +TGI+V+D+ TP G Sbjct: 109 GHVWNVTGDVLNADPSISEVTERWPI-HRDPPAFDDLEPETEMLETGIKVLDLLTPYVKG 167 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + I + LK + Sbjct: 168 GKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAGVLKDT 227 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T G + Sbjct: 228 ALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRM 287 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + LD Sbjct: 288 PSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAHLDATT 345 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI I G Sbjct: 346 ELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDIIAILG 404 >gi|210634566|ref|ZP_03298162.1| hypothetical protein COLSTE_02084 [Collinsella stercoris DSM 13279] gi|210158751|gb|EEA89722.1| hypothetical protein COLSTE_02084 [Collinsella stercoris DSM 13279] Length = 477 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/326 (30%), Positives = 169/326 (51%), Gaps = 15/326 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+P+DG + + + D I P + F+TGI+ +D+ P G Sbjct: 101 GRIWNVMGEPVDGKE-MPEVDAYYPIHHPAPAFDQLTTKTEIFETGIKAVDLLEPYIRGG 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ L+ + + + + VGER RE + ++E + K+ Sbjct: 160 KTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMSESGVIDKTC 219 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R L +T AEYF +G +VLL +D+I RF+ + E++ G +P Sbjct: 220 LVYGQMNEPPGARLRIGLAGLTEAEYFRDRGQDVLLFIDNIFRFSQAGSEVSALLGRMPS 279 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD VL Sbjct: 280 AVGYQPTLATEMGDLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDATTVL 337 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYRP 397 +RS++ G +P +DPLAS S D + +E V+ + ++ + + +DI I Sbjct: 338 SRSISSLGLFPAIDPLASTSDALDPSIVGEEHYRVAVRVQEILQEYSDLQDIIAI----L 393 Query: 398 GVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ V++ I FL QS Sbjct: 394 GMDELSDEQRLTVNRARKIQQFLSQS 419 >gi|224004780|ref|XP_002296041.1| F-type H-ATPase beta subunit [Thalassiosira pseudonana CCMP1335] gi|209586073|gb|ACI64758.1| F-type H-ATPase beta subunit [Thalassiosira pseudonana CCMP1335] Length = 500 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 159/314 (50%), Gaps = 24/314 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+IN +G+P+D + D ME + P + + ++ TGI+V+D+ P Sbjct: 107 LGRIINVIGEPVDEKGPIFT-DKKMEKFAPLHRSAPTFTEQGKSQEILVTGIKVVDLLAP 165 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE--- 207 G +IG+F G+G+GK+ ++ + + + + VGER RE E IE Sbjct: 166 YAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYHEMIEGGV 225 Query: 208 -----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 D K+ +V +E P R LT + IAEYF +G +VLL +D+I R Sbjct: 226 IKINKDTGSTEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFR 285 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ Sbjct: 286 FTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQERI--TSTAKGSITSVQAVYVPADDLT 343 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LI 380 DP + + LD VL+R++AE G YP VDPL S SR+ D D+ V+ T L+ Sbjct: 344 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRMLDPRVIGDKHYQVARATQKLL 403 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 404 QDYKGLQDIIAILG 417 >gi|4519288|dbj|BAA75559.1| ATP synthase beta-subunit [Pleodorina indica] Length = 376 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKRTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|157827763|ref|YP_001496827.1| F0F1 ATP synthase subunit beta [Rickettsia bellii OSU 85-389] gi|166201730|sp|A8GY40|ATPB_RICB8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157803067|gb|ABV79790.1| F0F1 ATP synthase subunit beta [Rickettsia bellii OSU 85-389] Length = 473 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 163/307 (53%), Gaps = 19/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N +G+PIDG + KG S+ + K P+ +Q ++ TGI+V+D+ P G Sbjct: 89 GRIMNVVGEPIDGKGKI-KGS-SISSIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD---NLK 215 +IG+F G+G+GK+ L+ + + + VGER RE + + + NL+ Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLE 206 Query: 216 -----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AE F ++G +VL +D+I RF + E Sbjct: 207 EPEKSKVALVYGQMNEPPGARARVALTGLTVAESFRDMNEGQDVLFFVDNIFRFTQAGSE 266 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP + Sbjct: 267 VSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADDLTDPAPATS 324 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD IVL+R +AE G YP VDPL S S++ D +E V+ + ++ ++ + Sbjct: 325 FAHLDATIVLSRQIAELGIYPAVDPLDSTSQVLDPMIVGEEHYNVARKVQQILQTYKSLQ 384 Query: 388 DIRLIGG 394 DI I G Sbjct: 385 DIIAILG 391 >gi|22266799|gb|AAM94913.1|AF522463_8 subunit beta [Ilyobacter tartaricus] Length = 467 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 158/302 (52%), Gaps = 11/302 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N LG+ ID + L + + + + PA Q + + F+TGI+VID+ P Sbjct: 84 AVLGRILNVLGEAIDQKEELNAEEFAP--IHREAPAFEDQGTDVEIFETGIKVIDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G +IG+F G+G+GK+ L+ + +S+ VGER RE R+ ++ L Sbjct: 142 VKGGKIGLFGGAGVGKTVLIMELINNIAKGHGGLSVFAGVGERTREGRDLFDEMTESGVL 201 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LT +T+AE F K G +VLL +D+I RF + E++ Sbjct: 202 DKTSLVYGQMNEPPGARLRVALTGLTMAENFRDKEGQDVLLFVDNIFRFTQAGSEVSALL 261 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +++ L ERI + + G+IT+V +V V D+ DP + + LD Sbjct: 262 GRMPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLD 319 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLI 392 VL+R +A G YP VDPL S S + E + + ++ R++E +DI I Sbjct: 320 ATTVLSRRIASLGIYPAVDPLDSTSTALQPGVTGHEHYTTAREVQSVLQRYKELQDIIAI 379 Query: 393 GG 394 G Sbjct: 380 LG 381 >gi|74185232|dbj|BAE30095.1| unnamed protein product [Mus musculus] Length = 529 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATNF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|255733360|gb|ACU31112.1| ATP synthase beta subunit [Childia sp. MR-2009] Length = 427 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 92/273 (33%), Positives = 144/273 (52%), Gaps = 16/273 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID L + I P ++ ++ +TGI+V+D+ P G Sbjct: 64 LGRIINVIGEPIDERGPL-NAKKYLPIHQDAPAFVDMSVEQEILETGIKVVDLLAPYSKG 122 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210 +IG+F G+G+GK+ L+ + A++ V VGER RE + + L Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMITGGVISL 181 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 182 KDKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDYEGQDVLLFIDNIFRFTQAGSEV 241 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ ++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 242 SALLGRIPSAVGYQPTLATDTGTMQERI--TTTKKGSITSVQAIFVPADDLTDPAPATTF 299 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 332 >gi|22651730|gb|AAM26937.1| ATP synthase beta subunit [Drosera regia] Length = 494 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 176/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + + ++ G D+V + + GR Sbjct: 48 KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVVDTGTALSVPVGSATLGR 107 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P + + F+TGI+V+D+ P G Sbjct: 108 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGG 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ L+ + +S+ VGER RE + ++ + Sbjct: 165 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGVINEQN 224 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 225 IPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 284 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 285 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 342 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + DE + + + R++E +DI Sbjct: 343 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGDEHYETAQQVKQTLQRYKELQDI 402 Query: 390 RLIGG 394 I G Sbjct: 403 IAILG 407 >gi|21956128|dbj|BAC06428.1| ATP synthase beta-subunit [Volvox tertius] gi|31414561|dbj|BAC77260.1| beta subunit of ATP synthase [Volvox tertius] Length = 376 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|330812735|ref|YP_004357197.1| ATP synthase subunit beta [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380843|gb|AEA72193.1| putative ATP synthase, beta chain [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 458 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 102/336 (30%), Positives = 165/336 (49%), Gaps = 17/336 (5%) Query: 69 IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 IV +G E + G D++ + GR+++ LG PID G + E Sbjct: 49 IVRTIAMGSTEGLKRGLDVIDSGAAISVPVGKATLGRIMDVLGNPIDE-----AGPIDTE 103 Query: 128 ----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 I P + +TGI+VID+ P G ++G+F G+G+GK+ + R Sbjct: 104 ERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIR 163 Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239 + + + + VGER RE +F + N L K +V +E P R LT + Sbjct: 164 NIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGL 223 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 T+AE F +G++VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI Sbjct: 224 TMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 281 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + ++G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S SR Sbjct: 282 TSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSR 341 Query: 360 LADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D E + +++ R++E +DI I G Sbjct: 342 QLDPNVIGQEHYDTARGVQYVLQRYKELKDIIAILG 377 >gi|296109136|ref|YP_003616085.1| ATP synthase, B subunit [Methanocaldococcus infernus ME] gi|295433950|gb|ADG13121.1| ATP synthase, B subunit [Methanocaldococcus infernus ME] Length = 464 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 100/332 (30%), Positives = 167/332 (50%), Gaps = 16/332 (4%) Query: 59 LGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116 +GQV+ R L +V + G + + F +I S GR+ N G+PIDG Sbjct: 44 MGQVLEAREGLAVVQVFEGTTGLNVDKTRVRFTGKTAKIGVSTEMLGRIFNGRGQPIDGG 103 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + ++ ++I ++R+ +TGI ID L GQ++ +F+GSG+ + Sbjct: 104 PEIVP-EMELDINGYPLNPVSRKYPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQ 162 Query: 177 LLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 L AR V+ + +G E F+E++ L+K+VV + +++ I Sbjct: 163 LAVQIARQAKVRGEGEKFAVVFAAMGITAEEANFFMEEFRRTGALEKAVVFINLANDPAI 222 Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R + P A+T+AEY + + D +VL+IL +T + ++REI+ E+P RGYP +++ Sbjct: 223 ERILTPRMALTVAEYLAFEKDMHVLVILTDMTNYCEALREISAARNEVPGRRGYPGYMYT 282 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L + ER G + + G IT + + + D+ PI D I +G IVL+R L +G Y Sbjct: 283 DLATIYERAGRVKGKVGTITQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY 342 Query: 349 PPVDPLASVSRLADKAWSA-----DEKKLVSS 375 PP+D L S+SRLA D KK+V+ Sbjct: 343 PPIDVLPSLSRLAGSGQGPGKTREDHKKVVNQ 374 >gi|41179057|ref|NP_958414.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii] gi|336667|gb|AAA84146.1| ATP synthase beta subunit [Chlamydomonas reinhardtii] gi|28269780|tpg|DAA00958.1| TPA_inf: CF1 ATP synthase beta subunit [Chlamydomonas reinhardtii] gi|213517439|gb|ACJ50145.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii] gi|217315587|gb|ACK37278.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii] gi|217315589|gb|ACK37279.1| ATP synthase CF1 beta subunit [Chlamydomonas reinhardtii] Length = 491 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 107 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 165 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 166 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 225 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 226 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 283 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 284 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 341 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 342 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|15668389|ref|NP_247185.1| V-type ATP synthase subunit B [Methanocaldococcus jannaschii DSM 2661] gi|2493103|sp|Q57669|VATB_METJA RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|1590954|gb|AAB98199.1| H+-transporting ATP synthase, subunit B (atpB) [Methanocaldococcus jannaschii DSM 2661] Length = 465 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 103/333 (30%), Positives = 167/333 (50%), Gaps = 18/333 (5%) Query: 59 LGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116 +GQV+ R L +V + G + F +I S GR+ N GKPIDG Sbjct: 46 MGQVLEAREGLAVVQVFEGTTGLSTKDTRVRFTGRTAKIGVSMEMLGRIFNGAGKPIDGG 105 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + ++I ++R+ +TGI ID L GQ++ +F+GSG+ + Sbjct: 106 PEIVP-EKELDINGYPLNPVSRKVPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQ 164 Query: 177 LLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228 L + AR + F V+ + +G E F+E++ L+++VV + +D+ Sbjct: 165 LAAQIARQAKVRGEGEKF-AVVFAAMGITSEEANFFMEEFRKTGALERAVVFINLADDPA 223 Query: 229 ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 I R + P A+T+AEY + + D +VL+IL +T + ++REI+ E+P RGYP ++ Sbjct: 224 IERILTPRIALTVAEYLAYEKDMHVLVILTDMTNYCEALREISAARNEVPGRRGYPGYMY 283 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 ++L + ER G + G IT + + + D+ PI D I +G IVL+R L +G Sbjct: 284 TDLATIYERAGRVKGRTGTITQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGI 343 Query: 348 YPPVDPLASVSRLADKAWSA-----DEKKLVSS 375 YPPVD L S+SRLA D KK+V+ Sbjct: 344 YPPVDVLPSLSRLAGNGQGPGKTREDHKKVVNQ 376 >gi|119350477|gb|ABL63189.1| AtpB [Chlorococcum echinozygotum] Length = 390 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 164/325 (50%), Gaps = 23/325 (7%) Query: 87 VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145 V G+ I P GR+ N LG+P+D + D ++ I K P ++ F Sbjct: 20 VLDTGKPLIVPVGKVTLGRIFNVLGEPVDNMGPVKIED-TLPIHRKAPAFVDLDTRLSIF 78 Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREV 202 +TGI+V+D+ P G +IG+F G+G+GK+ L+ + +S+ VGER RE Sbjct: 79 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREG 138 Query: 203 REF----------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251 + +E L D+ K +V +E P LTA+T+AEYF + Sbjct: 139 NDLYTEMKESGVIVEKNLADS--KVALVYGQMNEPPXXXXXVALTALTMAEYFRDINKQD 196 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 VL +D+I RF + E++ G +P A GY ++ +E+ L ERI + + G+IT++ Sbjct: 197 VLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQ 254 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK- 370 +V V D+ DP + + LD VL+R+LA +G YP VDPL S S + + W EK Sbjct: 255 AVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKH 313 Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394 + ++ + R++E +DI I G Sbjct: 314 YQTAQNVKKTLQRYKELQDIIAILG 338 >gi|332969727|gb|EGK08741.1| ATP synthase F1 sector beta subunit [Kingella kingae ATCC 23330] Length = 465 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 156/307 (50%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG P+D +G D + I P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPVDEAGPIGS-DQTRAIHQPAPKFDELSSATELLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +++AE+F + KG +VL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD +VL+R +A G YP VDPL S SR D E V+ + + +++E R Sbjct: 317 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQATLQKYKELR 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|292492007|ref|YP_003527446.1| alternate F1F0 ATPase, F1 subunit beta [Nitrosococcus halophilus Nc4] gi|291580602|gb|ADE15059.1| alternate F1F0 ATPase, F1 subunit beta [Nitrosococcus halophilus Nc4] Length = 470 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 98/296 (33%), Positives = 147/296 (49%), Gaps = 9/296 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N G PID +L + + I P R K F+TGI+ +D+ PL Sbjct: 92 ALLGRMLNVFGDPIDNKGTLDASE-RLPIHRTPLPLAQRVTTRKIFETGIKAVDLLAPLE 150 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G + G+F G+G+GK+ L++ + ISL +GER RE E D L Sbjct: 151 EGGKAGLFGGAGVGKTVLITEMIHNMVGRYQGISLFCGIGERSREAEELYRDMKEAGVLD 210 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274 ++++ +E P R A+T+AEYF NVLL++D+I RF S E++ G Sbjct: 211 NTIMLFGQMNEPPGARFRVGHAALTVAEYFRDIAKRNVLLLIDNIFRFIQSGTEVSGLMG 270 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ++P GY ++ +EL L ERI S G+IT+V +V V D+ DP A + L Sbjct: 271 KIPSRVGYQPTLGTELAELEERICSSAS--GSITSVQAVYVPADDLTDPSATHTFAHLSA 328 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 IVL+R A +G YP +DPL S S+ L K+ + + +EE +DI Sbjct: 329 SIVLSRKKASQGFYPAIDPLQSDSKMLTPGVVGKRHYKVAQEVRRTLAEYEELKDI 384 >gi|126134912|ref|XP_001383980.1| F1F0-ATPase complex, F1 beta subunit [Scheffersomyces stipitis CBS 6054] gi|126091178|gb|ABN65951.1| F1F0-ATPase complex, F1 beta subunit [Scheffersomyces stipitis CBS 6054] Length = 503 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 163/307 (53%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I ++ P + + + +TGI+V+D+ P G Sbjct: 117 LGRIINVVGEPIDERGPI-ECKQRNPIHAEPPSFVEQSTAAEVLETGIKVVDLLAPYARG 175 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 176 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 234 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 235 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSE 292 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 293 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 350 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D A E + +++ + ++ + Sbjct: 351 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGKEHYDVATNVQQTLQAYKSLQ 410 Query: 388 DIRLIGG 394 DI I G Sbjct: 411 DIIAILG 417 >gi|145529528|ref|XP_001450547.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124418169|emb|CAK83150.1| unnamed protein product [Paramecium tetraurelia] Length = 414 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 92/304 (30%), Positives = 158/304 (51%), Gaps = 14/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G PID + + + I + P +++ + TGI+V+D+ P G Sbjct: 113 GRIMNVIGDPIDERGPI-ETKIRYPIHREAPSFVDQGSGAEILITGIKVVDLLAPYARGG 171 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ L+ + + + VGER RE + + + + Sbjct: 172 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEMVASGVINLSG 231 Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 + ++ +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 232 GSRCALIYGQMNEPPGARARVGLTGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVSAL 291 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ ++L +L ERI + +KG+IT+V ++ V D+ DP + + L Sbjct: 292 LGRIPSAVGYQPTLATDLGQLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHL 349 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391 D VL+R+L E G YP VDPL S SR+ D ++ V+ + L+ ++ +DI Sbjct: 350 DATTVLSRALTELGIYPAVDPLDSSSRMMDPNIVGEKHYTVTRGVQKLLQDYKSLQDIIC 409 Query: 392 IGGY 395 GY Sbjct: 410 HFGY 413 >gi|21956132|dbj|BAC06429.1| ATP synthase beta-subunit [Volvox carteri f. nagariensis] gi|116256368|dbj|BAF35215.1| ATP synthase beta subunit [Pleodorina thompsonii] Length = 376 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|4519286|dbj|BAA75558.1| ATP synthase beta-subunit [Pleodorina japonica] gi|4519340|dbj|BAA75585.1| ATP synthase beta-subunit [Platydorina caudata] gi|21956006|dbj|BAC06373.1| ATP synthase beta-subunit [Volvox obversus] Length = 376 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|58424949|gb|AAW73986.1| ATP synthase beta chain [Xanthomonas oryzae pv. oryzae KACC10331] Length = 512 Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG+PID + D EI P ++ + +TGI+VID+ P Sbjct: 124 AGTLGRIMDVLGRPIDEAGDVQASD-HWEIHRGAPSYEDQSSSTELLETGIKVIDLMCPF 182 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 183 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 241 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF + KG +VLL +D+I R+ + Sbjct: 242 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDANGKGKDVLLFVDNIYRYTLAGT 301 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 302 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 359 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD + L+R++A G YP VDPL S SR D E + + +++E Sbjct: 360 TFAHLDSTVTLSRNIASLGIYPAVDPLDSTSRQMDPLVIGHEHYDTAQRVQQTLQKYKEL 419 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 420 KDIIAILG 427 >gi|319899411|ref|YP_004159508.1| ATP synthase beta chain [Bartonella clarridgeiae 73] gi|319403379|emb|CBI76943.1| ATP synthase beta chain [Bartonella clarridgeiae 73] Length = 531 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 22/310 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+P+D + I + P M + + TGI+VID+ P G Sbjct: 139 GRIMNVIGEPVDEVGPI-MATKKRSIHQEAPKYMEQSTESEILITGIKVIDLLAPYSKGG 197 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214 ++G+F G+G+GK+ L+ + A++ V VGER RE E IE + N Sbjct: 198 KVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVNVNP 256 Query: 215 K---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 K K +V +E P R L+ +TIAE F +G +VL +D+I RF + Sbjct: 257 KEKRGSTAGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRFTQA 316 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + G+IT+V ++ V D+ DP Sbjct: 317 GAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTRIGSITSVQAIYVPADDLTDPAP 374 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + +++ R++ Sbjct: 375 ATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMMDPLIVGEEHYAVACQVQNILQRYK 434 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 435 SLQDIIAILG 444 >gi|256387191|gb|ACU80596.1| ATP synthase beta subunit [Priapulus caudatus] Length = 366 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 94/276 (34%), Positives = 149/276 (53%), Gaps = 24/276 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N +G+PID +G ++ + I ++ P ++ +TGI+V+D+ P Sbjct: 52 GRIMNVIGEPIDE-----RGPITTKHKASIHAEAPEFAEMSTDQEILETGIKVVDLLAPY 106 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED-- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 107 VKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGV 165 Query: 209 -YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 L D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 166 ISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAG 225 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP Sbjct: 226 SEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAPA 283 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + + LD VL+R +AE G YP VDPL S+SR+ D Sbjct: 284 TTFAHLDATTVLSRGIAELGIYPAVDPLDSISRIMD 319 >gi|239928881|ref|ZP_04685834.1| F0F1 ATP synthase subunit beta [Streptomyces ghanaensis ATCC 14672] gi|291437208|ref|ZP_06576598.1| F0F1 ATP synthase subunit beta [Streptomyces ghanaensis ATCC 14672] gi|291340103|gb|EFE67059.1| F0F1 ATP synthase subunit beta [Streptomyces ghanaensis ATCC 14672] Length = 482 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 101/327 (30%), Positives = 176/327 (53%), Gaps = 17/327 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ D++ G+ I K P + + F+TG++VID+ TP G Sbjct: 105 GKVFNTLGEVLNVDETY-DGE-RWPIHRKAPNFDELESKTEMFETGVKVIDLLTPYVKGG 162 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + I++ + K+ Sbjct: 163 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIDEMSESGVIDKTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 283 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R ++E+G YP VDPL S SR+ D + A D + +++ ++++ +DI I Sbjct: 341 LSRPISEKGIYPAVDPLDSTSRILDPRYIAQDHYNAAMRVKNILQKYKDLQDIIAI---- 396 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 397 LGIDELGEEDKLVVHRARRVERFLSQN 423 >gi|295687682|ref|YP_003591375.1| ATP synthase F1 subunit beta [Caulobacter segnis ATCC 21756] gi|295429585|gb|ADG08757.1| ATP synthase F1, beta subunit [Caulobacter segnis ATCC 21756] Length = 536 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 96/321 (29%), Positives = 162/321 (50%), Gaps = 23/321 (7%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ GR++N +G+PID + + D++ I P + + TGI+VI Sbjct: 135 IRVPVGPGTLGRIMNVIGEPIDEQGPI-RSDITRTIHRDAPTFAEQTNTAEVLVTGIKVI 193 Query: 153 DIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK+ L++ A++ V+ VGER RE + + Sbjct: 194 DLMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG-VGERTREGNDLYHE 252 Query: 209 YLGDNLK-------------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 + N+ + +V +E P R LT ++IAEYF +G +VLL Sbjct: 253 MIESNVNVDPKANNGSTEGSRCALVYGQMNEPPGARARVALTGLSIAEYFRDEEGKDVLL 312 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +E+ L ERI + KG+IT+V ++ Sbjct: 313 FVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERI--TSTNKGSITSVQAIY 370 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R +A + +P VDPL S SR+ D +E V+ Sbjct: 371 VPADDLTDPAPATSFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMDPLVIGEEHYTVA 430 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ +++ +DI I G Sbjct: 431 RRVQEVLQQYKALKDIIAILG 451 >gi|327540206|gb|EGF26796.1| F0F1 ATP synthase subunit beta [Rhodopirellula baltica WH47] Length = 479 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 112/333 (33%), Positives = 178/333 (53%), Gaps = 23/333 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LG+PID + + D I + PP + F+TGI+V+D+ TP G Sbjct: 94 GRVFNVLGQPIDKRGDV-QADDYWPIHRQAPPVNELSTNTELFETGIKVVDLLTPFVRGG 152 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLGDN-- 213 + G+F G+G+GK+ +L+ + AR S + + VGER RE E E +G Sbjct: 153 KAGLFGGAGLGKTVILTELIARIASSHGGYSVFAGVGERTREGTDLWLEMQETEIGSTGR 212 Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 ++++ +V +E P R L+A+T+AEYF + G + LL +D+I RF+ + E++ Sbjct: 213 NVIEQTCMVFGQMNEPPGSRLRVALSALTMAEYFRDTTGADTLLFVDNIFRFSQAGSEVS 272 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G IT+V +V V D+ DP + Sbjct: 273 ALLGRMPSAVGYQPTLATEMGALQERI--TSTKQGAITSVQAVYVPADDPTDPAPATAFG 330 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD I L RS++E+G YP +DPLAS SR+ D + D ++ + ++ R+ E +DI Sbjct: 331 QLDAFIYLERSISEKGIYPAIDPLASNSRILDPQYVGDRHYTIARRVQTILQRYRELQDI 390 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I GVD + ++ VH+ I FL Q Sbjct: 391 IAI----LGVDELSEEDKTIVHRARRIERFLSQ 419 >gi|195126431|ref|XP_002007674.1| GI13073 [Drosophila mojavensis] gi|193919283|gb|EDW18150.1| GI13073 [Drosophila mojavensis] Length = 618 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 108/319 (33%), Positives = 163/319 (51%), Gaps = 25/319 (7%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTG 148 R+ GR+IN +G PID +G++ E S + P + V+ TG Sbjct: 144 IRVPVGKTVLGRIINVVGDPIDE-----RGEIKSEFYSFIHNEAPLLEELSVKPEILVTG 198 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE--- 201 I+VID+ P G +IG+F G+G+GK+ L+ + A+S V + GER RE Sbjct: 199 IKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELINNIAKSHGGYSVFVG-AGERTREGND 257 Query: 202 -VREFIEDY---LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256 E IE L D+ K +V +E P R LT +TIAEYF G +VLL + Sbjct: 258 LYHEMIETKVISLEDDTSKVALVYGQMNEPPGARSRVVLTGLTIAEYFRDIDGQDVLLFI 317 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ + ERI + + G+IT+V +V V Sbjct: 318 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDMGTMQERI--TSTKNGSITSVQAVYVP 375 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ +DP + S LD VL+R +AE G YP VDPL S SR+ D DE V+ + Sbjct: 376 ADDLSDPAPAATFSHLDATTVLSRPIAELGIYPAVDPLDSSSRVLDPDIVGDEHYNVARA 435 Query: 376 LTHLIHRFEETRDIRLIGG 394 + + ++ +DI I G Sbjct: 436 VQKTLQGYKSLQDIIAILG 454 >gi|119416492|emb|CAI34837.1| ATP synthase beta chain, mitochondrial precursor [Polytomella sp. Pringsheim 198.80] Length = 574 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 158/307 (51%), Gaps = 17/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + D+ I + P + ++ TGI+V+D+ P G Sbjct: 118 LGRIMNVIGEPVDEQGPIDAADI-WSIHREAPEFTEQSTEQEILVTGIKVVDLLAPYQRG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L+ + + + VGER RE RE IE LG Sbjct: 177 GKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLG 236 Query: 212 DNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 237 AERGNSKCTLVYGQMNEPPGARARVALTGLTVAEYFRDIEGQDVLLFVDNIFRFTQANSE 296 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + Sbjct: 297 VSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAVYVPADDLTDPGPATT 354 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETR 387 + LD VL+RS+AE G YP VDPL S SR+ + A+ + + ++ ++ + Sbjct: 355 FAHLDATTVLSRSIAELGIYPAVDPLDSTSRMRNPNVIGAEHYNVARGVQKVLQDYKNLQ 414 Query: 388 DIRLIGG 394 DI I G Sbjct: 415 DIIAILG 421 >gi|4519282|dbj|BAA75556.1| ATP synthase beta-subunit [Volvox rousseletii] Length = 376 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|320407251|gb|ADW27401.1| ATP synthase beta subunit [Ophelia limacina] Length = 359 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 98/285 (34%), Positives = 148/285 (51%), Gaps = 16/285 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + I P + ++ +TGI+V D+ P G Sbjct: 31 LGRIINVIGEPIDERGPV-NAKTYWGIHQDAPEFVEMSVEQEILETGIKVADLLAPYAKG 89 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IGVF G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 90 GKIGVFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 148 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 149 KDDSSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 208 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 209 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPAPATTF 266 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 + LD VL+R +AE G YP VDPL S SR+ DK +E V+ Sbjct: 267 AHLDATTVLSRGIAELGIYPAVDPLDSNSRILDKNVVGEEHYTVA 311 >gi|294668638|ref|ZP_06733734.1| ATP synthase F1, beta subunit [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309400|gb|EFE50643.1| ATP synthase F1, beta subunit [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 463 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 156/305 (51%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG P+D + + + I + P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPVDEAGPVNASN-TRAIHQEAPKFDELSSTTELLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 200 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIA 270 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 201 VAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 319 HLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|45657126|ref|YP_001212.1| F0F1 ATP synthase subunit beta [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|294828180|ref|NP_712957.2| F0F1 ATP synthase subunit beta [Leptospira interrogans serovar Lai str. 56601] gi|81568536|sp|Q72SX9|ATPB_LEPIC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|302393678|sp|Q8F2J5|ATPB_LEPIN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|45600364|gb|AAS69849.1| ATP synthase beta chain [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|293386027|gb|AAN49975.2| F0F1 ATP synthase subunit beta [Leptospira interrogans serovar Lai str. 56601] Length = 467 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 163/304 (53%), Gaps = 15/304 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LGK ID ++ + + I P + F+TGI+VID+ P Sbjct: 87 ATLGRIFNVLGKTIDEGPAITVKE-TRPIHRAAPSFDELTSKTEVFETGIKVIDLLAPYI 145 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGD 212 G + G+F G+G+GK+ L+ + + + VGER RE RE E + D Sbjct: 146 KGGKTGLFGGAGVGKTVLIQELINNIAKQHGGFSVFAGVGERTREGNDLWREMKESGVID 205 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 K+V+ +E P R L+A+T+AE+F S G +VLL +D+I RF+ + E++ Sbjct: 206 ---KTVLCYGQMNEPPGARLRVALSALTMAEHFRDSIGTDVLLFVDNIFRFSQAGSEVSA 262 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 263 LLGRMPSAVGYQPTLSTEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPANAFAH 320 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD VL+R+++++G YP VDPL S SR+ + +E LV+ + ++ R+++ +DI Sbjct: 321 LDATTVLSRAISDKGIYPAVDPLDSTSRVMNAQVLGEEHYLVAREVQRILQRYKDLQDII 380 Query: 391 LIGG 394 I G Sbjct: 381 AILG 384 >gi|119350535|gb|ABL63218.1| AtpB [Pleurastrum insigne] Length = 388 Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG K ++ I + P ++ F+TGI+V+D+ P Sbjct: 36 LGRIFNVLGEPVD---NLGPVKQSETLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYR 92 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 93 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 152 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 153 EKNLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 212 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 213 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 270 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 271 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSTAQSVKKTLQRYKE 329 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 330 LQDIIAILG 338 >gi|253997694|ref|YP_003049758.1| ATP synthase F1 subunit beta [Methylotenera mobilis JLW8] gi|253984373|gb|ACT49231.1| ATP synthase F1, beta subunit [Methylotenera mobilis JLW8] Length = 475 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 100/305 (32%), Positives = 157/305 (51%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + D I K P +TGI+VID+ P G Sbjct: 93 GRIMDVLGRPIDEAGPI-ESDERRSIHQKAPTFEELSPSVDLLETGIKVIDLVCPFAKGG 151 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 ++G+F G+G+GK+ L++ A+ V VGER RE +F + D Sbjct: 152 KVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMAEAGVIKLD 210 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 ++K+S V V +E P R L+ +T+AE F +G +VL +D+I R+ + E++ Sbjct: 211 DMKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 270 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 271 ALLGRMPSAVGYQPTLADEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQ 328 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D +E ++ S+ + R++E RDI Sbjct: 329 HLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYQVARSVQQTLQRYKELRDI 388 Query: 390 RLIGG 394 I G Sbjct: 389 IAILG 393 >gi|167648692|ref|YP_001686355.1| F0F1 ATP synthase subunit beta [Caulobacter sp. K31] gi|190358276|sp|B0T335|ATPB_CAUSK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|167351122|gb|ABZ73857.1| ATP synthase F1, beta subunit [Caulobacter sp. K31] Length = 542 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 98/319 (30%), Positives = 161/319 (50%), Gaps = 22/319 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ GR++N +G+PID + K D+ I P + + TGI+VID Sbjct: 143 RVPVGPGTLGRIMNVIGEPIDEQGPI-KSDIFRTIHRDAPTFAEQTNTAEVLVTGIKVID 201 Query: 154 IFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 + P G +IG+F G+G+GK+ L++ A++ V+ VGER RE + + Sbjct: 202 LMCPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG-VGERTREGNDLYHEM 260 Query: 210 LGDNLK------------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 + N+ + +V +E P R LT ++IAEYF +G +VLL + Sbjct: 261 IESNVNVDPKINGSTEGSRCALVYGQMNEPPGARARVALTGLSIAEYFRDEEGKDVLLFV 320 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +E+ L ERI + KG+IT+V ++ V Sbjct: 321 DNIFRFTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERI--TSTNKGSITSVQAIYVP 378 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +A + +P VDPL S SR+ D E V+ S Sbjct: 379 ADDLTDPAPAASFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMDPLIIGQEHYDVARS 438 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ +++ +DI I G Sbjct: 439 VQEVLQQYKSLKDIIAILG 457 >gi|89574015|gb|ABD77233.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Mus musculus] Length = 445 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 77 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 135 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+G + L+ + A++ V VGER RE E IE L Sbjct: 136 GKIGLFGGAGVGXTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 194 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 195 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 254 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 255 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 312 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 313 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 372 Query: 389 IRLIGG 394 I I G Sbjct: 373 IIAILG 378 >gi|11559334|dbj|BAB18825.1| ATP synthase beta-subunit [Yamagishiella unicocca] Length = 376 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRSAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|317055015|ref|YP_004103482.1| ATP synthase F1 subunit beta [Ruminococcus albus 7] gi|315447284|gb|ADU20848.1| ATP synthase F1, beta subunit [Ruminococcus albus 7] Length = 468 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 99/297 (33%), Positives = 156/297 (52%), Gaps = 9/297 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N LG P+D + + EI + P + + +TGI+VID+ P G + Sbjct: 90 RMFNLLGDPVDNLPAPETAE-RWEIHREPPSYEEQTAANEILETGIKVIDLIAPYLKGGK 148 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ + IS+ VGER RE + + E + K+V+ Sbjct: 149 IGLFGGAGVGKTVLIQELINNVANQHGGISVFTGVGERTREGNDLYWEMKESGVIDKTVL 208 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R L+ +T+AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 209 VYGQMNEPPGARMRVGLSGLTMAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPS 268 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + LD VL Sbjct: 269 AVGYQPTLATEMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVL 326 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +RS+A G +P VDPL S SR+ +E V+ + ++ R+ E +DI I G Sbjct: 327 SRSIASLGIFPAVDPLESTSRILTPEIVGNEHYQVARQVQSILQRYVELQDIIAIMG 383 >gi|113954817|ref|YP_731481.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CC9311] gi|123031607|sp|Q0I7U1|ATPB_SYNS3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|113882168|gb|ABI47126.1| ATP synthase F1, beta subunit [Synechococcus sp. CC9311] Length = 487 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 161/308 (52%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + +++ I + P + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVNT-NVTSPIHREAPKLTELETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G +IG+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKIGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ER+ + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERV--ASTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VLNR+LA +G YP VDPL S S + A DE + ++ + R++E Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|237832039|ref|XP_002365317.1| ATP synthase beta chain, putative [Toxoplasma gondii ME49] gi|78057343|gb|ABB17195.1| mitochondrial F1-ATP synthase beta subunit precursor [Toxoplasma gondii] gi|211962981|gb|EEA98176.1| ATP synthase beta chain, putative [Toxoplasma gondii ME49] gi|221486827|gb|EEE25073.1| ATP synthase beta chain, putative [Toxoplasma gondii GT1] gi|221506525|gb|EEE32142.1| ATP synthase beta chain, putative [Toxoplasma gondii VEG] Length = 560 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 163/315 (51%), Gaps = 29/315 (9%) Query: 103 GRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCH 160 GR++N +G+P+D + K S+ + P Q E G +TGI+V+D+ P Sbjct: 163 GRIMNVIGEPVDECGPVPAKKTYSIH---RAAPLFADQSTEPGLLQTGIKVVDLLAPYAK 219 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK T+L M ++ +K + + VGER RE + + + + Sbjct: 220 GGKIGLFGGAGVGK-TVLIMELINNVANKHGGFSVFAGVGERTREGNDLYHEMMTTGVIK 278 Query: 215 -------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 K+ +V +E P R LTA+++AEYF +G +VLL +D+I Sbjct: 279 RKKLEDGKFDFTGSKAALVYGQMNEPPGARARVALTALSVAEYFRDEQGQDVLLFIDNIY 338 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ ++L +L ERI + +KG+IT+V +V V D+ Sbjct: 339 RFTQAGSEVSALLGRIPSAVGYQPTLATDLGQLQERI--TTTKKGSITSVQAVYVPADDL 396 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR LA + + + L Sbjct: 397 TDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLAPEIVGQEHYDTARATQKL 456 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 457 LQDYKSLQDIIAILG 471 >gi|119896451|ref|YP_931664.1| F0F1 ATP synthase subunit beta [Azoarcus sp. BH72] gi|166201689|sp|A1K1S2|ATPB_AZOSB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|119668864|emb|CAL92777.1| ATP synthase beta chain [Azoarcus sp. BH72] Length = 466 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 155/299 (51%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID + +L I K P + +TGI+VID+ P G Sbjct: 90 LGRIMDVLGRPIDEAGPVETDELRA-IHQKAPKFDELSPSVELLETGIKVIDLICPFAKG 148 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 149 GKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G + Sbjct: 208 VAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRM 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + LD + Sbjct: 268 PSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTV 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R +A G YP VDPL S SR D +E V+ ++ + +++E RDI I G Sbjct: 326 VLSRDIAALGIYPAVDPLDSTSRQLDPLVVGEEHYSVARAVQQTLQKYKELRDIIAILG 384 >gi|119350449|gb|ABL63175.1| AtpB [Ascochloris multinucleata] Length = 392 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + G+ ++ I P + F+TGI+V+D+ P G Sbjct: 38 LGRIFNVLGEPVDNLGPVKPGE-TLPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRG 96 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 97 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 156 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 157 NLPDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 214 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 273 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYSTAQSVKKTLQRYKE 331 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 332 LQDIIAILG 340 >gi|4519278|dbj|BAA75554.1| ATP synthase beta-subunit [Volvox barberi] gi|11559346|dbj|BAB18831.1| ATP synthase beta-subunit [Pandorina morum] gi|297306750|dbj|BAA75580.2| ATP synthase beta-subunit [Pandorina colemaniae] Length = 376 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|58617198|ref|YP_196397.1| F0F1 ATP synthase subunit beta [Ehrlichia ruminantium str. Gardel] gi|58416810|emb|CAI27923.1| ATP synthase beta chain [Ehrlichia ruminantium str. Gardel] Length = 515 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 15/273 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GRV + LG PID L K D S++ I S+VP +++ + TGI+VID+ P Sbjct: 123 ATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLAPY 182 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD--- 212 G ++G+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 183 LKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVI 242 Query: 213 NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 NL+ ++V+V +E P R L+A+T+AEYF + +VL +D+I RF S Sbjct: 243 NLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSG 302 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 EI+ G +P A GY ++ +E+ + ERI + +G+IT+V ++ V D+ DP Sbjct: 303 SEISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNRGSITSVQAIYVPADDLTDPAPA 360 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + + LD VL+R +AE G YP VDPL S S+ Sbjct: 361 TSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQ 393 >gi|258690468|gb|ACV87996.1| ATP synthase beta subunit [Leucilla nuttingi] Length = 427 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 99/317 (31%), Positives = 161/317 (50%), Gaps = 17/317 (5%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G I A GR++N +G+PID + S I ++ P + ++ +TGI+ Sbjct: 53 GPITIPVGAETLGRIMNVIGEPIDERGPI-NAKASAPIHAEAPEFVEMSVEQEILETGIK 111 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI 206 V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE + Sbjct: 112 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLY 170 Query: 207 EDYLGDNL-------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258 + + + K +V E P R LT +T+AEYF K G +VLL +D+ Sbjct: 171 HEMIVGGVIVLDKPGSKVALVYGQMIEPPGARAGFALTGLTVAEYFRDKEGQDVLLFIDN 230 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D Sbjct: 231 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPAD 288 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377 + DP + + LD VL+R +AE G YP VDPL S SR+ D E + S+ Sbjct: 289 DLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNVVGQEHYDIARSVQ 348 Query: 378 HLIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 349 KILQGYKSLQDIIAILG 365 >gi|256825629|ref|YP_003149589.1| F0F1 ATP synthase subunit beta [Kytococcus sedentarius DSM 20547] gi|256689022|gb|ACV06824.1| ATP synthase, F1 beta subunit [Kytococcus sedentarius DSM 20547] Length = 486 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 91/256 (35%), Positives = 142/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 F+TGI+VID+ TP G +IG+F G+G+GK+ L+ M AR D + + VGER RE Sbjct: 149 FETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIARVARDHGGVSVFAGVGERTRE 208 Query: 202 VREF-IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + +E L ++ +V DE P R L+A+T+AEYF + +VLL +D+I Sbjct: 209 GNDLMVEMEEAGVLGQTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNI 268 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + +IT++ ++ V D+ Sbjct: 269 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADD 326 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTH 378 + DP + + LD L+R +A G YP VDPL S SR+ D + A D + + Sbjct: 327 YTDPAPATTFAHLDATTELSRPIASMGIYPAVDPLTSTSRILDPRYIARDHYDTAARVKS 386 Query: 379 LIHRFEETRDIRLIGG 394 ++ R++E +DI I G Sbjct: 387 ILQRYKELQDIIAILG 402 >gi|119350485|gb|ABL63193.1| AtpB [Elakatothrix viridis] Length = 392 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 160/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + + I + PP ++ F+TGI+V+D+ P Sbjct: 39 GRIFNVLGEPVD---NLGPVETKEKLPIHRQAPPFVDLDTRLSIFETGIKVVDLLAPYRR 95 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LG 211 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 96 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVE 155 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E Sbjct: 156 KNLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 274 FAHLDATTVLSRVLASKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQSVKRTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|331007714|ref|ZP_08330844.1| ATP synthase beta chain [gamma proteobacterium IMCC1989] gi|330418473|gb|EGG93009.1| ATP synthase beta chain [gamma proteobacterium IMCC1989] Length = 465 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 155/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG PID +G+ + M I K P E+ +TGI+VID+ P G Sbjct: 84 GRIMDVLGSPIDECGPIGEQE-RMPIHRKAPAYDELSASEELLETGIKVIDLVCPFAKGG 142 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214 ++G+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVDVET 202 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 203 FSNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSA 262 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ ERI + + G+IT++ +V V D+ DP + + Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVFQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAH 320 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A +G YP VDPL S SR D +E + + ++ R++E +DI Sbjct: 321 LDSTVVLSRDIASKGIYPAVDPLGSTSRQLDPLIIGNEHYDIARGVQTVLQRYKELKDII 380 Query: 391 LIGG 394 I G Sbjct: 381 AILG 384 >gi|89889622|ref|ZP_01201133.1| H(+)-transporting ATP synthase beta chain [Flavobacteria bacterium BBFL7] gi|89517895|gb|EAS20551.1| H(+)-transporting ATP synthase beta chain [Flavobacteria bacterium BBFL7] Length = 503 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 161/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG +L K GD + I P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGLGNLPKTGDNGLSIHRSAPAFEDLSTSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D K+ V +E P R L+ +TIAEYF Sbjct: 210 DAFMHSMEEGGWDLQKVDKEIMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 270 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTAEI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + ++ L+ R++E +DI I G Sbjct: 388 LGKEHYECAQNVKELLQRYKELQDIIAILG 417 >gi|4519354|dbj|BAA75592.1| ATP synthase beta-subunit [Phacotus lenticularis] Length = 376 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D D K D ++ I + P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVD-DMGPVKVDETLPIHRQAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLVDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGVLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK ++ T + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYGAAQTVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|109898980|ref|YP_662235.1| F0F1 ATP synthase subunit beta [Pseudoalteromonas atlantica T6c] gi|122971827|sp|Q15SF7|ATPB1_PSEA6 RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|109701261|gb|ABG41181.1| ATP synthase F1, beta subunit [Pseudoalteromonas atlantica T6c] Length = 537 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 17/309 (5%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGI 149 G ++ R+ N G PIDG + D + + PPA+ + + + F+TGI Sbjct: 88 GPLKVPVGPSTLSRMFNVFGAPIDGHTY--QHDGKWRSVHQAPPALTKISSQLQIFETGI 145 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----V 202 +++D+ PL G + G+F G+G+GK+ LLS + + +S+ +GER RE Sbjct: 146 KIVDVLCPLERGGKAGLFGGAGVGKTVLLSEMIHNMVSQQQGVSIFCGIGERCREGEELY 205 Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 RE E + DN+ V++ +E P R A+T+AEYF + +VLL++D+I R Sbjct: 206 REMKEAGVLDNM---VMLFGQMNEPPGSRFRIGHAALTMAEYFRDDEKKDVLLLIDNIFR 262 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G++P GY ++ +EL L ERI + E G +T++ +V V D+ Sbjct: 263 FIQAGSEVSGLMGQMPSRMGYQPTLGTELAGLEERI--ANTEDGAVTSIQAVYVPADDFT 320 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP A S L +VL+R A EG YP VDPL S S+LA V+ + ++ Sbjct: 321 DPAAVHTFSHLSATLVLSRKRASEGFYPAVDPLQSSSKLATPTVVGQRHYDVARQVKQIL 380 Query: 381 HRFEETRDI 389 ++ E +DI Sbjct: 381 AQYNELKDI 389 >gi|319404806|emb|CBI78407.1| ATP synthase beta chain [Bartonella rochalimae ATCC BAA-1498] Length = 530 Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 160/312 (51%), Gaps = 21/312 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D D L I + P + + + TGI+VID+ P Sbjct: 136 ATLGRIMNVIGEPVD-DAGLIMATKKRSIHQEAPQYVEQSTESEILVTGIKVIDLLAPYS 194 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G ++G+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 195 KGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVN 253 Query: 212 DNLK--------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 + + K +V +E P R L+ +TIAE F +G +VL +D+I RF Sbjct: 254 VDPRENGSTVGSKCALVYGQMNEPPGARARVALSGLTIAENFRDEGQDVLFFVDNIFRFT 313 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP Sbjct: 314 QAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAIYVPADDLTDP 371 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 + + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ R Sbjct: 372 APATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHYTVACQVQTILQR 431 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 432 YKSLQDIIAILG 443 >gi|11559350|dbj|BAB18833.1| ATP synthase beta-subunit [Pandorina morum] Length = 376 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|229593481|ref|YP_002875600.1| F0F1 ATP synthase subunit beta [Pseudomonas fluorescens SBW25] gi|259585448|sp|C3K1E6|ATPB_PSEFS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|229365347|emb|CAY53725.1| ATP synthase beta chain [Pseudomonas fluorescens SBW25] Length = 458 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 102/336 (30%), Positives = 165/336 (49%), Gaps = 17/336 (5%) Query: 69 IVYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G E + G D+V + GR+++ LG PID G + E Sbjct: 49 VVRTIAMGSTEGLKRGLDVVDTGAAISVPVGKATLGRIMDVLGNPIDE-----AGPIDTE 103 Query: 128 ----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR 183 I P + +TGI+VID+ P G ++G+F G+G+GK+ + R Sbjct: 104 ERWGIHRPAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIR 163 Query: 184 SDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239 + + + + VGER RE +F + N L K +V +E P R LT + Sbjct: 164 NIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGL 223 Query: 240 TIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 T+AE F +G++VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI Sbjct: 224 TMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI-- 281 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + ++G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S SR Sbjct: 282 TSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSR 341 Query: 360 LADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D E + +++ R++E +DI I G Sbjct: 342 QLDPNVIGQEHYDTARGVQYVLQRYKELKDIIAILG 377 >gi|183206562|gb|ACC54479.1| ATP synthase beta subunit [Campanula mirabilis] Length = 475 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 112/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 36 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 95 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 96 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 152 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 211 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF NVLL +D+I RF + E+ Sbjct: 212 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 271 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 272 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 329 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 330 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 389 Query: 389 IRLIGG 394 I I G Sbjct: 390 IITILG 395 >gi|118573533|sp|Q5FGY3|ATPB_EHRRG RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 504 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 15/273 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GRV + LG PID L K D S++ I S+VP +++ + TGI+VID+ P Sbjct: 112 ATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLAPY 171 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD--- 212 G ++G+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 172 LKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVI 231 Query: 213 NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 NL+ ++V+V +E P R L+A+T+AEYF + +VL +D+I RF S Sbjct: 232 NLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSG 291 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 EI+ G +P A GY ++ +E+ + ERI + +G+IT+V ++ V D+ DP Sbjct: 292 SEISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNRGSITSVQAIYVPADDLTDPAPA 349 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + + LD VL+R +AE G YP VDPL S S+ Sbjct: 350 TSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQ 382 >gi|14718267|gb|AAK72871.1| ATP synthase beta subunit [Xyris sp. Chase 154] Length = 483 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 158/305 (51%), Gaps = 20/305 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + + + F+TGI+V+D+ P Sbjct: 98 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFVQLETRLEIFETGIKVVDLLAP 154 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLG-- 211 G +IG+F G+G+GK+ L+ + +S+ VGER RE + +IE Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYIEMKESGV 214 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL KS V V +E P R LTA+T+AEYF NVLL +D+I RF + Sbjct: 215 INEKNLTKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQNVLLFIDNIFRFVQA 274 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAP 332 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + + + + + R++ Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQLRIVGKEHYETAQRVKQTLQRYK 392 Query: 385 ETRDI 389 E +DI Sbjct: 393 ELQDI 397 >gi|58579145|ref|YP_197357.1| F0F1 ATP synthase subunit beta [Ehrlichia ruminantium str. Welgevonden] gi|58417771|emb|CAI26975.1| ATP synthase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 515 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 15/273 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GRV + LG PID L K D S++ I S+VP +++ + TGI+VID+ P Sbjct: 123 ATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLAPY 182 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD--- 212 G ++G+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 183 LKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVI 242 Query: 213 NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 NL+ ++V+V +E P R L+A+T+AEYF + +VL +D+I RF S Sbjct: 243 NLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSG 302 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 EI+ G +P A GY ++ +E+ + ERI + +G+IT+V ++ V D+ DP Sbjct: 303 SEISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNRGSITSVQAIYVPADDLTDPAPA 360 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + + LD VL+R +AE G YP VDPL S S+ Sbjct: 361 TSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQ 393 >gi|57239187|ref|YP_180323.1| F0F1 ATP synthase subunit beta [Ehrlichia ruminantium str. Welgevonden] gi|81637893|sp|Q5HB71|ATPB_EHRRW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|57161266|emb|CAH58187.1| ATP synthase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 504 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 15/273 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GRV + LG PID L K D S++ I S+VP +++ + TGI+VID+ P Sbjct: 112 ATLGRVFDVLGNPIDNCGPLTKSDYSIKPIYSEVPKLTDQKVTTEILVTGIKVIDLLAPY 171 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD--- 212 G ++G+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 172 LKGGKVGLFGGAGVGKTVLIMELIHNIAKAHKGVSVFAGVGERTREGNDLYHEMIESGVI 231 Query: 213 NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 NL+ ++V+V +E P R L+A+T+AEYF + +VL +D+I RF S Sbjct: 232 NLEEKDKSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDVENQDVLFFVDNIFRFTQSG 291 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 EI+ G +P A GY ++ +E+ + ERI + +G+IT+V ++ V D+ DP Sbjct: 292 SEISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNRGSITSVQAIYVPADDLTDPAPA 349 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + + LD VL+R +AE G YP VDPL S S+ Sbjct: 350 TSFAHLDSTTVLSRQIAELGIYPAVDPLDSASQ 382 >gi|4519338|dbj|BAA75584.1| ATP synthase beta-subunit [Pandorina unicocca] Length = 376 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|329945883|ref|ZP_08293570.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328528331|gb|EGF55309.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 478 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 163/304 (53%), Gaps = 19/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156 G V N G ++ LG G+ +EI + + PPA ++ + E+ F+TGI+VID+ T Sbjct: 99 GHVFNVTGDVLN----LGPGE-QLEIAERWPIHRQPPAFDQLESKEQMFETGIKVIDLLT 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212 P G +IG+F G+G+GK+ L+ + + +S+ VGER RE + I E Sbjct: 154 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIVEMDEAG 213 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K+ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 214 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVST 273 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + Sbjct: 274 LLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHSITSLQAIYVPADDYTDPAPATTFAH 331 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SRL + E V++ + ++ + +E +DI Sbjct: 332 LDATTELSREIASRGIYPAVDPLTSTSRLLAPGYVGQEHYDVATRVKSILQKNKELQDII 391 Query: 391 LIGG 394 I G Sbjct: 392 AILG 395 >gi|298293437|ref|YP_003695376.1| ATP synthase F1 subunit beta [Starkeya novella DSM 506] gi|296929948|gb|ADH90757.1| ATP synthase F1, beta subunit [Starkeya novella DSM 506] Length = 477 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 94/313 (30%), Positives = 156/313 (49%), Gaps = 22/313 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + G + I P + + TGI+V+D+ P Sbjct: 83 ATLGRIMNVIGEPVDEAGPV-VGTTTRGIHQPAPSYAEQSTEAEILVTGIKVVDLLAPYS 141 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK 215 G ++G+F G+G+GK+ L+ + A++ V VGER RE + + + + Sbjct: 142 KGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIESKVN 200 Query: 216 -------------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRF 262 K +V +E P R LT +T+AEYF +G +VL +D+I RF Sbjct: 201 VDPHENNGSAAGSKCALVYGQMNEPPGARARVALTGLTVAEYFRDQGQDVLFFVDNIFRF 260 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ D Sbjct: 261 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTD 318 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381 P + + LD VL+RS+AE+G YP VDPL S SR+ +E V+ + + Sbjct: 319 PAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRILSPMILGEEHYNVARQVQQTLQ 378 Query: 382 RFEETRDIRLIGG 394 R++ +DI I G Sbjct: 379 RYKSLQDIIAILG 391 >gi|4519294|dbj|BAA75562.1| ATP synthase beta-subunit [Eudorina elegans] gi|4519296|dbj|BAA75563.1| ATP synthase beta-subunit [Eudorina elegans] gi|4519298|dbj|BAA75564.1| ATP synthase beta-subunit [Eudorina elegans] gi|4519300|dbj|BAA75565.1| ATP synthase beta-subunit [Eudorina elegans] gi|4519302|dbj|BAA75566.1| ATP synthase beta-subunit [Eudorina illinoisensis] gi|4519342|dbj|BAA75586.1| ATP synthase beta-subunit [Eudorina cylindrica] gi|14020799|dbj|BAB47544.1| ATP synthase beta-subunit [Eudorina illinoisensis] gi|14020803|dbj|BAB47546.1| ATP synthase beta-subunit [Eudorina elegans] gi|14020805|dbj|BAB47547.1| ATP synthase beta-subunit [Eudorina elegans] gi|21956004|dbj|BAC06372.1| ATP synthase beta-subunit [Volvox gigas] gi|21956008|dbj|BAC06374.1| ATP synthase beta-subunit [Volvox africanus] gi|21956136|dbj|BAC06430.1| ATP synthase beta-subunit [Volvox carteri f. weismannia] gi|116256380|dbj|BAF35221.1| ATP synthase beta subunit [Volvox powersii] gi|116256400|dbj|BAF35231.1| ATP synthase beta subunit [Pleodorina starrii] Length = 376 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|87200415|ref|YP_497672.1| F0F1 ATP synthase subunit beta [Novosphingobium aromaticivorans DSM 12444] gi|118573710|sp|Q2G5N5|ATPB_NOVAD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|87136096|gb|ABD26838.1| ATP synthase F1 subcomplex beta subunit [Novosphingobium aromaticivorans DSM 12444] Length = 481 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 94/311 (30%), Positives = 157/311 (50%), Gaps = 21/311 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID +G + + I +K P + + TGI+VID+ P G Sbjct: 89 LGRIMNVIGEPIDERGPVG-AEQTAPIHAKAPEFIEQSTEAAILVTGIKVIDLLAPYARG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + +S+ VGER RE + ++L + Sbjct: 148 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKD 207 Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 K +V +E P R L+ +T+AEYF +G +VL +D+I RF Sbjct: 208 ADGNPTPDGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQ 267 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ +L ERI + KG+IT+V ++ V D+ DP Sbjct: 268 AGSEVSALLGRIPSAVGYQPTLATDMGQLQERI--TSTTKGSITSVQAIYVPADDLTDPA 325 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD LNR+++E G YP VDPL S SR+ A E + + + ++ Sbjct: 326 PATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRVLTPAVVGQEHYETARRVQETLQKY 385 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 386 KSLQDIIAILG 396 >gi|4063548|gb|AAC98332.1| ATP synthase beta subunit [Geranium sanguineum] Length = 456 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 158/306 (51%), Gaps = 20/306 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPDFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDY 209 P G +IG+F G+G+GK+ L+ + +S+ VGER RE +E E Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESG 194 Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + ++ K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 195 VINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + A+ ++ + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGAEHYEIAQRVKQTLQRY 372 Query: 384 EETRDI 389 +E +DI Sbjct: 373 KELQDI 378 >gi|4519352|dbj|BAA75591.1| ATP synthase beta-subunit [Pteromonas angulosa] Length = 376 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + K D ++ I + P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGPV-KVDETLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLVDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGVLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK ++ T + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYGAAQTVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|312963998|ref|ZP_07778469.1| ATP synthase subunit beta [Pseudomonas fluorescens WH6] gi|311282033|gb|EFQ60643.1| ATP synthase subunit beta [Pseudomonas fluorescens WH6] Length = 458 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+++ LG PID G + E I P + +TGI+VID+ Sbjct: 81 ATLGRIMDVLGNPIDE-----AGPIDTEERWGIHRPAPSFAEQAGGNDLLETGIKVIDLV 135 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGD 212 P G ++G+F G+G+GK+ + R+ + + + VGER RE +F + Sbjct: 136 CPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDS 195 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 N L K +V +E P R LT +T+AE F +G++VLL +D+I R+ + E++ Sbjct: 196 NVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSA 255 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 256 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDLTDPSPATTFAH 313 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E + +++ R++E +DI Sbjct: 314 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYDTARGVQYVLQRYKELKDII 373 Query: 391 LIGG 394 I G Sbjct: 374 AILG 377 >gi|254283668|ref|ZP_04958636.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR51-B] gi|219679871|gb|EED36220.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR51-B] Length = 461 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 105/339 (30%), Positives = 171/339 (50%), Gaps = 16/339 (4%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSME 127 IV +G E IS G V + G P GR+++ LG+PID +G+ + + Sbjct: 44 IVRTIAMGSSEGISRGLEVENTGAPVSVPVGVETLGRIMDVLGRPIDERGDIGEKERA-S 102 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I P E+ +TGI+VID+ P G ++G+F G+G+GK+ + + Sbjct: 103 IHRDAPAYDELAASEELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAT 162 Query: 188 DKVIISL---VGERGREVREF--------IEDYLGDNLKKSVVVVATSDESPILRKMAPL 236 + +S+ VGER RE +F + D + K +V +E P R L Sbjct: 163 EHSGLSVFAGVGERTREGNDFYYEMQESGVVDIENPSNSKVAMVYGQMNEPPGNRLRVAL 222 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T +T+AE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ER Sbjct: 223 TGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER 282 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 I + + G+IT++ +V V D+ DP + + LD +VL+R +A +G YP VDPL S Sbjct: 283 I--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDS 340 Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 SR D +E ++ + ++ R++E +DI I G Sbjct: 341 TSRQLDPLVIGNEHYEVARGVQSVLQRYKELKDIIAILG 379 >gi|126728278|ref|ZP_01744094.1| F0F1 ATP synthase subunit beta [Sagittula stellata E-37] gi|126711243|gb|EBA10293.1| F0F1 ATP synthase subunit beta [Sagittula stellata E-37] Length = 474 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 101/319 (31%), Positives = 162/319 (50%), Gaps = 20/319 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G + GR++N +G+P+D + + D I + P ++ + TGI+ Sbjct: 75 GPISVPVGTATLGRIMNVIGEPVDEKGPV-EADEYRPIHAPAPNFADQATEAEVLVTGIK 133 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE---- 201 VID+ P G +IG+F G+G+GK+ L+ + KV + + VGER RE Sbjct: 134 VIDLLAPYAKGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGLSVFAGVGERTREGNDL 191 Query: 202 VREFIED--YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 E IE DNL S +V +E P R LT +T+AE F + G +VL + Sbjct: 192 YHEMIESGVLTPDNLTDSKIALVYGQMNEPPGARARIALTGLTMAEQFRDATGTDVLFFV 251 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V Sbjct: 252 DNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVP 309 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VLNR+++E G YP VDPL S SRL D +E V+ Sbjct: 310 ADDLTDPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDPQVIGEEHYQVARD 369 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ R++ +DI I G Sbjct: 370 VQGILQRYKSLQDIIAILG 388 >gi|329847480|ref|ZP_08262508.1| ATP synthase F1, beta subunit [Asticcacaulis biprosthecum C19] gi|328842543|gb|EGF92112.1| ATP synthase F1, beta subunit [Asticcacaulis biprosthecum C19] Length = 482 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + + I + P ++ + TGI+VID+ P Sbjct: 92 ATLGRIMNVIGEPIDEAGPI-ETTFFNPIHADAPAFADQATSAELLVTGIKVIDLICPYA 150 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210 G ++G+F G+G+GK+ L++ A++ V VGER RE E IE + Sbjct: 151 KGGKVGLFGGAGVGKTVTIQELINNIAKAYGGYSVFAG-VGERTREGNDLYHEMIESNVN 209 Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 G + +V +E P R LT + AEYF +G +VL +D+I RF + Sbjct: 210 QKGGGGTSRCTLVYGQMNEPPGARARVALTGLAQAEYFRDVEGKDVLFFVDNIFRFTQAG 269 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ RL ERI + KG+IT+V +V V D+ DP Sbjct: 270 SEVSALLGRIPSAVGYQPTLATEMGRLQERI--TSTNKGSITSVQAVYVPADDLTDPAPA 327 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+RS+AE+G YP VDPL S SR+ D + + + + ++ +++ Sbjct: 328 NSFAHLDATTVLSRSIAEQGIYPAVDPLDSTSRILDPRVVGQEHYDTATRVQEILQQYKA 387 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 388 LKDIIAILG 396 >gi|326499079|dbj|BAK06030.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 517 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 17/311 (5%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GR++N G PID + KG I ++ P +++ + TGI+V+D+ Sbjct: 123 PVGPGCLGRIMNVTGDPIDERGPI-KGTKLAPIHAEAPEFVDQSTSAEILVTGIKVVDLL 181 Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 P G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 182 APYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQE 240 Query: 212 ------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF Sbjct: 241 TGVIQLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQ 300 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP Sbjct: 301 AGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTQKGSITSVQAVYVPADDLTDPA 358 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R ++E G YP VDPL S SR+ D E S + ++ + Sbjct: 359 PATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYDTASKVQQMLQEY 418 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 419 KSLQDIIAILG 429 >gi|302521948|ref|ZP_07274290.1| ATP synthase F1, beta subunit [Streptomyces sp. SPB78] gi|318060706|ref|ZP_07979429.1| F0F1 ATP synthase subunit beta [Streptomyces sp. SA3_actG] gi|318075497|ref|ZP_07982829.1| F0F1 ATP synthase subunit beta [Streptomyces sp. SA3_actF] gi|302430843|gb|EFL02659.1| ATP synthase F1, beta subunit [Streptomyces sp. SPB78] Length = 480 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 161/299 (53%), Gaps = 10/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ + I + P + + F+TGI+VID+ TP G Sbjct: 101 GKVFNTLGEVLNKPEENANVGERWAIHRQAPRFDELESKTEMFETGIKVIDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + I D + D+ + K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLI-DEMSDSGVIDKT 219 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G + Sbjct: 220 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 279 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD Sbjct: 280 PSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATT 337 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++E+G YP VDPL S SR+ D + A D + +++ ++++ +DI I G Sbjct: 338 VLSRPISEKGIYPAVDPLDSTSRILDPRYIARDHYDTAMRVKNILQKYKDLQDIIAILG 396 >gi|146271651|emb|CAL25307.1| atpD beta synthase chain [Pseudomonas vancouverensis] Length = 284 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 8/286 (2%) Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG PID +G+ + I P + + +TGI+VID+ P G ++G+F Sbjct: 1 LGNPIDEAGPIGE-EERWGIHRAAPSFAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFG 59 Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224 G+G+GK+ + R+ + + + VGER RE +F + N L K +V Sbjct: 60 GAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQM 119 Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 +E P R LT +T+AE F +G++VLL +D+I R+ + E++ G +P A GY Sbjct: 120 NEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQP 179 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 ++ E+ L ERI + ++G+IT++ +V V D+ DP + + LD +VL+R +A Sbjct: 180 TLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAS 237 Query: 345 EGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 G YP VDPL S SR D D + + +++ R++E +DI Sbjct: 238 LGIYPAVDPLDSTSRQLDPNVIGNDHYETARGVQYVLQRYKELKDI 283 >gi|11559348|dbj|BAB18832.1| ATP synthase beta-subunit [Pandorina morum] Length = 376 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 104/325 (32%), Positives = 165/325 (50%), Gaps = 23/325 (7%) Query: 87 VFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF 145 V G+ I P GR+ N LG+P+D ++ K + ++ I P ++ F Sbjct: 15 VLDTGKPLIVPVGKVTLGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIF 73 Query: 146 KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREV 202 +TGI+V+D+ P G +IG+F G+G+GK+ L+ + +S+ VGER RE Sbjct: 74 ETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREG 133 Query: 203 REF----------IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDN 251 + +E L D+ K +V +E P R LTA+T+AEYF + Sbjct: 134 NDLYTEMKESGVIVEKNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQD 191 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 VL +D+I RF + E++ G +P A GY ++ +E+ L ERI + + G+IT++ Sbjct: 192 VLFFIDNIFRFVQAGAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQ 249 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +V V D+ DP + + LD VL+R+LA +G YP VDPL S S + + W EK Sbjct: 250 AVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKH 308 Query: 372 L--VSSLTHLIHRFEETRDIRLIGG 394 S+ + R++E +DI I G Sbjct: 309 YDRAQSVKKTLQRYKELQDIIAILG 333 >gi|325068185|ref|ZP_08126858.1| F0F1 ATP synthase subunit beta [Actinomyces oris K20] Length = 478 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 163/304 (53%), Gaps = 19/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156 G V N G ++ LG G+ +EI + + PPA ++ + E+ F+TGI+VID+ T Sbjct: 99 GHVFNVTGDVLN----LGPGE-QLEITERWPIHRQPPAFDQLESKEQMFETGIKVIDLLT 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212 P G +IG+F G+G+GK+ L+ + + +S+ VGER RE + I E Sbjct: 154 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIVEMDEAG 213 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K+ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 214 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVST 273 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + Sbjct: 274 LLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHSITSLQAIYVPADDYTDPAPATTFAH 331 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SRL + E V++ + ++ + +E +DI Sbjct: 332 LDATTELSREIASRGIYPAVDPLTSTSRLLAPGYVGQEHYDVATRVKSILQKNKELQDII 391 Query: 391 LIGG 394 I G Sbjct: 392 AILG 395 >gi|258690470|gb|ACV87997.1| ATP synthase beta subunit [Acanthascus dawsoni] Length = 361 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G PID + S I + P + ++ +TGI+V+D+ P G Sbjct: 25 LGRIMNVIGDPIDERGPIDSEHRS-NIHQEAPEFVEMSVTQEILETGIKVVDLLAPYARG 83 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210 +IG+F G+G+GK+ L+ + +R+ V VGER RE + + L Sbjct: 84 GKIGLFGGAGVGKTVLIMELINNISRAHGGYSVFAG-VGERTREGNDLYHEMITTGVISL 142 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269 D+ K +V +E P R LT +T+AE+F K G +VLL +D+I RF + E+ Sbjct: 143 KDDKSKVSLVYGQMNEPPGARARVCLTGLTVAEHFRDKEGQDVLLFIDNIFRFTQAGSEV 202 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 203 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 260 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ + +E ++ S+ ++ ++ +D Sbjct: 261 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMEPHIVGEEHYTIARSVQRVLQNYKSLQD 320 Query: 389 IRLIGG 394 I I G Sbjct: 321 IIAILG 326 >gi|11559342|dbj|BAB18829.1| ATP synthase beta-subunit [Volvulina boldii] Length = 376 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVD-NMGIVKVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|149236902|ref|XP_001524328.1| ATP synthase beta chain, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] gi|146451863|gb|EDK46119.1| ATP synthase beta chain, mitochondrial precursor [Lodderomyces elongisporus NRRL YB-4239] Length = 415 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 116/353 (32%), Positives = 179/353 (50%), Gaps = 30/353 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN G PID D + I ++ P + + + +TGI+V+D+ P G Sbjct: 29 LGRIINVTGDPID-DRGPIECKKRNPIHAEPPSFIEQSTAAEVLETGIKVVDLLAPYARG 87 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 88 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 146 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 147 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 204 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 205 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 262 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D A E + + + + ++ + Sbjct: 263 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATGVQQTLQAYKSLQ 322 Query: 388 DIRLIGGYRPGVDLI--LDK-AVHQVPIIYDFLKQSPSDLSSEDVFQEITKKL 437 DI I G+D + DK V + I FL Q + +VF I+ KL Sbjct: 323 DIIAI----LGMDELSEADKLTVERARKIQRFLSQP---FAVAEVFTGISGKL 368 >gi|116071285|ref|ZP_01468554.1| ATP synthase subunit B [Synechococcus sp. BL107] gi|116066690|gb|EAU72447.1| ATP synthase subunit B [Synechococcus sp. BL107] Length = 487 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + K + I + P + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPV-KTKTTAPIHREAPKLTELETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ER+ + + G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGTLQERVASTVE--GSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VLNR+LA +G YP VDPL S S + A DE + ++ + R++E Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSSSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|291531909|emb|CBK97494.1| ATP synthase F1 subcomplex beta subunit [Eubacterium siraeum 70/3] Length = 465 Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D + + + EI P ++ + +TGI+V+D+ P G Sbjct: 87 LGRIFNLLGEAVD-NKPQPETEEKWEIHRPAPSFEEQEGSTQVLETGIKVVDLIAPYLKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + +S+ VGER RE + + ++K+ Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKQHGGLSVFTGVGERTREGNDLYNEMTESGVIEKT 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L+ +T+AEYF K G +VLL +D+I RF + E++ G + Sbjct: 206 TLVYGQMNEPPGARMRVALSGLTMAEYFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRM 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 266 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R+++ G +P VDPL S SR+ +E ++ + ++ R+ E +DI I G Sbjct: 324 VLSRNISSMGIFPAVDPLDSTSRILTPEIVGEEHYEVARQVQSILQRYNELQDIIAILG 382 >gi|326774105|ref|ZP_08233387.1| ATP synthase F1, beta subunit [Actinomyces viscosus C505] gi|326636244|gb|EGE37148.1| ATP synthase F1, beta subunit [Actinomyces viscosus C505] Length = 478 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/304 (33%), Positives = 163/304 (53%), Gaps = 19/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156 G V N G ++ LG G+ +EI + + PPA ++ + E+ F+TGI+VID+ T Sbjct: 99 GHVFNVTGDVLN----LGPGE-QLEITERWPIHRQPPAFDQLESKEQMFETGIKVIDLLT 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212 P G +IG+F G+G+GK+ L+ + + +S+ VGER RE + I E Sbjct: 154 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIVEMDEAG 213 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K+ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 214 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVST 273 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + Sbjct: 274 LLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHSITSLQAIYVPADDYTDPAPATTFAH 331 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SRL + E V++ + ++ + +E +DI Sbjct: 332 LDATTELSREIASRGIYPAVDPLTSTSRLLAPGYVGQEHYDVATRVKSILQKNKELQDII 391 Query: 391 LIGG 394 I G Sbjct: 392 AILG 395 >gi|289433910|ref|YP_003463782.1| ATP synthase F1 beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170154|emb|CBH26694.1| ATP synthase F1 beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 456 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 120/403 (29%), Positives = 201/403 (49%), Gaps = 28/403 (6%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + L +V++ + I + + IGE L G +V + GR + G Sbjct: 33 EYETHQG---NYLAEVVQ-HTGINTVSAIAIGEVSGLARGTIVNNLGRPIEVPVGEKVLG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG ++ I P ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGKPE-PDTEVKWPIFRNQPKLSELDTNKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGRE----VREFIEDYLGDNLKKS 217 G+F G+G+GKS L+ + + + VGER RE +E E + L ++ Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNAVFTGVGERVREGIGLYKELEESGV---LPQT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G++ Sbjct: 205 TVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKI 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD I Sbjct: 265 PITGGYQSTLSKEVGNFQDRIASTKD--GSITSIQCVFLPADDIDDPSAVATFSHLDSTI 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL RS+A G +P V+PL S SR + + + L + ++ R+ E ++I + G Sbjct: 323 VLERSIAALGIFPAVNPLQSSSRALNPNFVGERHYNLAVQVKFILQRYMELQEIINVLGI 382 Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433 D DK+ V++ I +FL Q S SE +F EI Sbjct: 383 AELSD--EDKSLVNRARKIRNFLSQPFYVSEKFTGSEGIFVEI 423 >gi|42559032|gb|AAS20202.1| ATP synthase beta subunit [Xyris jupicai] Length = 482 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 158/305 (51%), Gaps = 20/305 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + + + F+TGI+V+D+ P Sbjct: 95 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFVQLETRLEIFETGIKVVDLLAP 151 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLG-- 211 G +IG+F G+G+GK+ L+ + +S+ VGER RE + +IE Sbjct: 152 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYIEMKESGV 211 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL KS V V +E P R LTA+T+AEYF NVLL +D+I RF + Sbjct: 212 INEKNLTKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQNVLLFIDNIFRFVQA 271 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAP 329 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + + + + + R++ Sbjct: 330 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQLRIVGKEHYETAQRVKQTLQRYK 389 Query: 385 ETRDI 389 E +DI Sbjct: 390 ELQDI 394 >gi|46909251|gb|AAT06143.1| ATP synthase beta subunit [Obelia sp. KJP-2004] Length = 427 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/272 (34%), Positives = 146/272 (53%), Gaps = 14/272 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + I ++ P + ++ TGI+V+D+ P G Sbjct: 64 LGRIMNVIGEPIDERGPIVTKS-KAPIHTEAPEFVEMSVQQEILITGIKVVDLLAPYAKG 122 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L+S + + + VGER RE EF+E L Sbjct: 123 GKIGLFGGAGVGKTVLISELINNIAKAHGGYSVFAGVGERTREGNDLYHEFMETGVINLK 182 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 D+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 183 DDSSKVALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVS 242 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + + Sbjct: 243 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVPADDLTDPAPATTFA 300 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 LD + VL+R +AE G YP VDPL S SR+ D Sbjct: 301 HLDANTVLSRGIAELGIYPAVDPLDSNSRILD 332 >gi|525291|emb|CAA52636.1| ATP synthase beta subunit [Triticum aestivum] Length = 553 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 157/309 (50%), Gaps = 17/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+PID + D + I + P + + ++ TGI+V+D+ P Sbjct: 162 ATLGRIINVIGEPIDHKGDIKTHDF-LPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQ 220 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL-- 210 G +IG+F G+G+GK+ L+ + + + VGER RE RE IE + Sbjct: 221 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIK 280 Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 K +V +E P R LT +T+AE+F ++G +VLL +D+I RF + Sbjct: 281 LDEKQAESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQAN 340 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 341 SEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAPA 398 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R ++E G YP VDPL S SR L+ D + ++ ++ Sbjct: 399 TTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGVDHYNTARGVQKVLQNYKN 458 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 459 LQDIIAILG 467 >gi|51209972|ref|YP_063636.1| ATP synthase CF1 beta subunit [Gracilaria tenuistipitata var. liui] gi|75323126|sp|Q6B8S4|ATPB_GRATL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|50657726|gb|AAT79711.1| ATP synthase CF1 beta subunit [Gracilaria tenuistipitata var. liui] Length = 475 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 156/307 (50%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + D S+ I P + F+TGI+V+D+ P G Sbjct: 91 LGRIFNVLGEPVDNLGDIQSED-SLPIHRAAPSFTQLETKPSIFETGIKVVDLLAPYRKG 149 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL------G 211 +IG+F G+G+GK+ L+ + A++ V + ER RE + E+ Sbjct: 150 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESKVINA 208 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 DNLK+S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 209 DNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 268 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + G+IT++ +V V D+ DP + Sbjct: 269 VSALLGRMPSAVGYQPTLATEMGTLQERI--TSTTDGSITSIQAVYVPADDLTDPAPATT 326 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+RSLA +G YP VDPL S S + + + + + R++E + Sbjct: 327 FAHLDATTVLSRSLAAKGIYPAVDPLGSTSTMLQPSIVGSQHYSTAQQIKSTLQRYKELQ 386 Query: 388 DIRLIGG 394 DI I G Sbjct: 387 DIIAILG 393 >gi|167750158|ref|ZP_02422285.1| hypothetical protein EUBSIR_01127 [Eubacterium siraeum DSM 15702] gi|167656901|gb|EDS01031.1| hypothetical protein EUBSIR_01127 [Eubacterium siraeum DSM 15702] gi|291556548|emb|CBL33665.1| ATP synthase F1 subcomplex beta subunit [Eubacterium siraeum V10Sc8a] Length = 465 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ +D + + + EI P ++ + +TGI+V+D+ P G Sbjct: 87 LGRIFNLLGEAVD-NKPQPETEEKWEIHRPAPSFEEQEGSTQVLETGIKVVDLIAPYLKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + +S+ VGER RE + + ++K+ Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNIAKQHGGLSVFTGVGERTREGNDLYNEMTESGVIEKT 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L+ +T+AEYF K G +VLL +D+I RF + E++ G + Sbjct: 206 TLVYGQMNEPPGARMRVALSGLTMAEYFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRM 265 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 266 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 323 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R+++ G +P VDPL S SR+ +E ++ + ++ R+ E +DI I G Sbjct: 324 VLSRNISSMGIFPAVDPLDSTSRILTPEIVGEEHYEVARQVQSILQRYNELQDIIAILG 382 >gi|34500012|gb|AAQ73588.1| ATP synthase beta subunit [Pasteurella bettyae] Length = 444 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/297 (31%), Positives = 153/297 (51%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+P+D +G + I P + + +TGI+VID+ P G Sbjct: 83 GRIMNVLGEPVDERGPIG-AEEEWAIHRAAPSYEEQSNSTELLETGIKVIDLICPFAKGG 141 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + K Sbjct: 142 KVGLFGGAGVGKTVNMMELIRNIATEHNGYSVFAGVGERTREGNDFYHEMTDSNVIDKVS 201 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 261 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 262 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 319 Query: 339 NRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +R++A G YP VDPL S SR D + + ++ R++E +DI I G Sbjct: 320 SRNIASLGIYPAVDPLDSTSRQLDPLVVGXXXLNVARGVQGILQRYKELKDIIAILG 376 >gi|226698718|sp|P06541|ATPB_CHLRE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 481 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 97 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 155 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 156 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 215 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 216 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 332 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 390 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 391 LQDIIAILG 399 >gi|71891801|ref|YP_277530.1| F0F1 ATP synthase subunit beta [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|118573509|sp|Q494C3|ATPB_BLOPB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71795907|gb|AAZ40658.1| ATP synthase, F1 sector, beta-subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 462 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV+N LG+PID + + + I P + TGI+VID+ P G Sbjct: 87 LGRVMNVLGEPIDMKGPIKEKE-KWSIHRSAPLYSELSTDQDLLVTGIKVIDLMCPFSKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG-DNLKKS 217 +IG+F G+G+GK+ + R+ + S+ VGER RE +F + + D + K Sbjct: 146 GKIGLFGGAGVGKTVNMMELIRNIAVEHSGYSVFVGVGERTREGNDFYNEMINSDVINKV 205 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 206 ALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGHDVLLFIDNIYRYTLAGTEVSALLGRIP 265 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY +++ E+ L ERI + G+IT+V +V V D+ DP + S LD IV Sbjct: 266 SAVGYQSTLSEEMGILQERI--TSTSLGSITSVQAVYVPADDLTDPSPATTFSHLDATIV 323 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S S+ + E V+ + ++ R++E +DI I G Sbjct: 324 LSRQIAALGIYPSVDPLDSNSQQLNPLIVGQEHYNVARDVKSILQRYQELKDIIAILG 381 >gi|162462751|ref|NP_001105340.1| ATP synthase subunit beta, mitochondrial precursor [Zea mays] gi|114420|sp|P19023|ATPBM_MAIZE RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|22173|emb|CAA38140.1| unnamed protein product [Zea mays] gi|897618|gb|AAA70268.1| mitochondrial F-1-ATPase subunit 2 [Zea mays] gi|223943103|gb|ACN25635.1| unknown [Zea mays] Length = 553 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/314 (32%), Positives = 163/314 (51%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+PID KGD+ + I + P + + ++ TGI+V+D+ Sbjct: 161 ATLGRIINVIGEPIDE-----KGDIKTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 215 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 216 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 274 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 L D +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 275 SGVIKLDDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 334 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 335 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 392 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 393 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQKVL 452 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 453 QNYKNLQDIIAILG 466 >gi|312139178|ref|YP_004006514.1| ATP synthase subunit beta [Rhodococcus equi 103S] gi|325673517|ref|ZP_08153208.1| ATP synthase F1 sector beta subunit [Rhodococcus equi ATCC 33707] gi|311888517|emb|CBH47829.1| ATP synthase beta chain AtpD [Rhodococcus equi 103S] gi|325555538|gb|EGD25209.1| ATP synthase F1 sector beta subunit [Rhodococcus equi ATCC 33707] Length = 482 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 164/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG D D+ G G D + + PPA ++ + + +TGI+VID+ TP Sbjct: 104 GHVFNALG---DCLDAPGTGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 160 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ Sbjct: 161 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQD 220 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF +G +VLL +D+I RF + E++T G Sbjct: 221 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGR 280 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 281 MPSAVGYQPTLADEMGELQERITSTRGR--SITSLQAIYVPADDYTDPAPATTFAHLDAT 338 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +++ G YP VDPL S SR+ + A+ ++ + + ++ +++E +DI I G Sbjct: 339 TELSRPISQMGIYPAVDPLTSTSRILEPGIVGAEHFRVANEVKRILQKYKELQDIIAILG 398 >gi|34500016|gb|AAQ73590.1| ATP synthase beta subunit [Bisgaard Taxon 5] Length = 426 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/297 (31%), Positives = 154/297 (51%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID +G + + I P ++ + +TGI+VID+ P G Sbjct: 83 GRIMNVLGEPIDERGPIG-AEENWSIHRAAPSYEDQSNSTELLETGIKVIDLICPFAKGG 141 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + + + VG R RE +F + N L K Sbjct: 142 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGXRTREGNDFYHEMTESNVLDKVS 201 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VL +D+ R+ + E++ G +P Sbjct: 202 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNNYRYTLAGTEVSALLGRMPS 261 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 262 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVL 319 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDPL S SR D E V+ + ++ R++E +DI I G Sbjct: 320 SRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|68485407|ref|XP_713381.1| hypothetical protein CaO19.13098 [Candida albicans SC5314] gi|68485502|ref|XP_713334.1| hypothetical protein CaO19.5653 [Candida albicans SC5314] gi|46434817|gb|EAK94217.1| hypothetical protein CaO19.5653 [Candida albicans SC5314] gi|46434865|gb|EAK94264.1| hypothetical protein CaO19.13098 [Candida albicans SC5314] Length = 512 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID D + I ++ P + + + +TGI+V+D+ P G Sbjct: 126 LGRIINVVGEPID-DRGPIECKEKKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARG 184 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 185 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 243 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 244 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 301 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 302 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 359 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D + E + + + + ++ + Sbjct: 360 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATGVQQTLQAYKSLQ 419 Query: 388 DIRLIGG 394 DI I G Sbjct: 420 DIIAILG 426 >gi|91178102|gb|ABE27286.1| mitochondrial F-ATPase beta subunit [Candida albicans] Length = 337 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 162/306 (52%), Gaps = 20/306 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID D + I ++ P + + + +TGI+V+D+ P G Sbjct: 20 GRIINVVGEPID-DRGPIECKEKKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARGG 78 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 79 KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINLE 137 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 138 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 195 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 196 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 253 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D + E + + + + ++ +D Sbjct: 254 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATGVQQTLQAYKSLQD 313 Query: 389 IRLIGG 394 I I G Sbjct: 314 IIAILG 319 >gi|90418835|ref|ZP_01226746.1| ATP synthase, beta subunit [Aurantimonas manganoxydans SI85-9A1] gi|90336915|gb|EAS50620.1| ATP synthase, beta subunit [Aurantimonas manganoxydans SI85-9A1] Length = 484 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 92/310 (29%), Positives = 159/310 (51%), Gaps = 20/310 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + K + I + P + + + TGI+VID+ P G Sbjct: 92 LGRIMNVIGEPIDEVGPI-KYESKRGIHQEAPAYIEQSPESQILVTGIKVIDLLAPYARG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNLKK-- 216 +IG+F G+G+GK+ L+ + + + VGER RE + + + + K Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVNKDP 210 Query: 217 -----------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 + +V +E P R LT +TIAE+F +G +VL +D+I RF + Sbjct: 211 HENNGSAEGSKAALVYGQMNEPPGARARVALTGLTIAEHFRDQGQDVLFFVDNIFRFTQA 270 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ ++ ERI + KG+IT+V ++ V D+ DP Sbjct: 271 GSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TTTNKGSITSVQAIYVPADDLTDPAP 328 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VLNR+++E+G YP VDPL S SR+ +E V+ + ++ +++ Sbjct: 329 ATSFAHLDATTVLNRAISEKGIYPAVDPLDSNSRMLSPMIIGEEHYDVARRVQEILQKYK 388 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 389 SLQDIIAILG 398 >gi|21223733|ref|NP_629512.1| F0F1 ATP synthase subunit beta [Streptomyces coelicolor A3(2)] gi|256785174|ref|ZP_05523605.1| F0F1 ATP synthase subunit beta [Streptomyces lividans TK24] gi|289769067|ref|ZP_06528445.1| ATP synthase F1, beta subunit [Streptomyces lividans TK24] gi|61219617|sp|P0A300|ATPB_STRCO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|61219618|sp|P0A301|ATPB_STRLI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|405801|emb|CAA80327.1| H(+)-transporting ATP synthase [Streptomyces lividans] gi|8568795|emb|CAB94544.1| ATP synthase beta chain [Streptomyces coelicolor A3(2)] gi|289699266|gb|EFD66695.1| ATP synthase F1, beta subunit [Streptomyces lividans TK24] Length = 478 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 176/327 (53%), Gaps = 17/327 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ D+ G+ I K P + + F+TG++VID+ TP G Sbjct: 101 GKVFNTLGEVLNVDEQY-TGE-RWPIHRKAPNFDELESKTEMFETGVKVIDLLTPYVKGG 158 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + I++ + K+ Sbjct: 159 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIDEMSESGVIDKTA 218 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 219 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 278 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 279 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 336 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R ++E+G YP VDPL S SR+ D + +A+ + +++ ++++ +DI I Sbjct: 337 LSRPISEKGIYPAVDPLDSTSRILDPRYIAAEHYNAAMRVKNILQKYKDLQDIIAI---- 392 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 393 LGIDELGEEDKLVVHRARRVERFLSQN 419 >gi|83944756|ref|ZP_00957122.1| ATP synthase subunit B [Oceanicaulis alexandrii HTCC2633] gi|83851538|gb|EAP89393.1| ATP synthase subunit B [Oceanicaulis alexandrii HTCC2633] Length = 479 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 29/314 (9%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR+++ G+PID GD+ +M+ + PA Q E TGI+V+D+ P Sbjct: 87 GRIMSVTGEPIDE-----AGDVQAAMMAPIHRPAPAFEEQSTEAEILPTGIKVVDLLCPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ L+ + F + + VGER RE E IE + Sbjct: 142 AKGGKIGLFGGAGVGKTVLIQELINNIAKLFGGYSVFAGVGERTREGNDLYYEMIESGVN 201 Query: 212 DNLKKS---------VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 + K++ +V +E P R L+ + AEYF +G +VL +D+I R Sbjct: 202 KDPKENGGSAEGSRCALVFGQMNEPPGARARVALSGLAQAEYFRDEEGKDVLFFVDNIFR 261 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ L ERI + +KG+IT+V +V V D+ Sbjct: 262 FTQAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTKKGSITSVQAVYVPADDLT 319 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VLNRS+AE+G YP VDPL S SR+ + +E + + ++ Sbjct: 320 DPAPATTFAHLDATTVLNRSIAEKGIYPAVDPLDSTSRILEPRIVGEEHYQTARRVQEIL 379 Query: 381 HRFEETRDIRLIGG 394 R++ +DI I G Sbjct: 380 QRYKALQDIIAILG 393 >gi|295400692|ref|ZP_06810669.1| ATP synthase F1, beta subunit [Geobacillus thermoglucosidasius C56-YS93] gi|312112618|ref|YP_003990934.1| ATP synthase F1 subunit beta [Geobacillus sp. Y4.1MC1] gi|294977273|gb|EFG52874.1| ATP synthase F1, beta subunit [Geobacillus thermoglucosidasius C56-YS93] gi|311217719|gb|ADP76323.1| ATP synthase F1, beta subunit [Geobacillus sp. Y4.1MC1] Length = 473 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 109/330 (33%), Positives = 173/330 (52%), Gaps = 19/330 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GRV N LG+PID + D + + + P E + +TGI+V+D+ P Sbjct: 92 LGRVFNVLGEPIDLQGEI-PADARRDPIHRPAPKFEELATEVEILETGIKVVDLLAPYIK 150 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LK 215 G +IG+F G+G+GK+ L+ + + IS+ VGER RE + + + D+ + Sbjct: 151 GGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYHE-MKDSGVIS 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 210 KTAMVFGQMNEPPGARMRVALTGLTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSALLG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + G+IT++ ++ V D++ DP + S LD Sbjct: 270 RMPSAVGYQPTLATEMGQLQERI--TSTSTGSITSIQAIYVPADDYTDPAPATTFSHLDA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R LAE G YP VDPLAS SR LA + + ++ + + R+ E +DI I Sbjct: 328 TTNLERKLAEMGIYPAVDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYRELQDIIAI- 386 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + D+ VH+ I FL Q+ Sbjct: 387 ---LGMDELSDEDKLVVHRARRIQFFLSQN 413 >gi|14020797|dbj|BAB47543.1| ATP synthase beta-subunit [Eudorina minodii] Length = 376 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|71909723|ref|YP_287310.1| F0F1 ATP synthase subunit beta [Dechloromonas aromatica RCB] gi|118573524|sp|Q477Z1|ATPB_DECAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71849344|gb|AAZ48840.1| ATP synthase F1 subcomplex beta subunit [Dechloromonas aromatica RCB] Length = 466 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 152/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + +L + I P +TGI+VID+ P G Sbjct: 92 GRIMDVLGRPIDEAGPIDSTELRV-IHQPAPKFDELSSSVDLLETGIKVIDLICPFAKGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHAGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F G ++L +D+I R+ + E++ G +P Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDDGRDILFFVDNIYRYTLAGTEVSALLGRMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 270 SAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ + + R++E RDI I G Sbjct: 328 LSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYSVARAVQMNLQRYKELRDIIAILG 385 >gi|4519284|dbj|BAA75557.1| ATP synthase beta-subunit [Pleodorina californica] Length = 376 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDCAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|284999819|dbj|BAI67810.1| ATP synthase beta-subunit [Gloeomonas sp. SAG 6.91] Length = 376 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGIAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|113869573|ref|YP_728062.1| F0F1 ATP synthase subunit beta [Ralstonia eutropha H16] gi|123328788|sp|Q0K5M7|ATPB_RALEH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|113528349|emb|CAJ94694.1| Membrane-bound ATP synthase, F1 sector,beta-subunit [Ralstonia eutropha H16] Length = 467 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + +L I K P +TGI+VID+ P G Sbjct: 92 GRIMDVLGRPIDEAGPIASDELRA-IHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D + + ++ + + R++E RDI I G Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGTEHYEVARRVQQTLQRYKELRDIIAILG 385 >gi|11514059|pdb|1E79|D Chain D, Bovine F1-Atpase Inhibited By Dccd (Dicyclohexylcarbodiimide) Length = 482 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 160/315 (50%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PID + + I ++ P + ++ TGI+V+ Sbjct: 86 IRIPVGPETLGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFVEMSVEQEILVTGIKVV 144 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIED 208 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE + Sbjct: 145 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHX 203 Query: 209 Y-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 L D K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 204 MIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 263 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 264 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 321 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ + + Sbjct: 322 TDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKI 381 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 382 LQDYKSLQDIIAILG 396 >gi|21956014|dbj|BAC06377.1| ATP synthase beta-subunit [Vitreochlamys aulata] gi|21956016|dbj|BAC06378.1| ATP synthase beta-subunit [Vitreochlamys aulata] Length = 376 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P + F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK + S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDIAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|86143764|ref|ZP_01062140.1| ATP synthase subunit B [Leeuwenhoekiella blandensis MED217] gi|85829807|gb|EAQ48269.1| ATP synthase subunit B [Leeuwenhoekiella blandensis MED217] Length = 502 Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 107/330 (32%), Positives = 163/330 (49%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG L K G + I + P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGIGDLPKAGKDGLPIHREAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 208 -DYL------GDNL----------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D++ G +L K+ V +E P R L+ +TIAEYF Sbjct: 210 EDFMHSMEEGGWDLTKVDKAAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 270 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA- 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ K Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTKEI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 AD ++ L+ R++E +DI I G Sbjct: 388 LGADHYNCAQNVKELLQRYKELQDIIAILG 417 >gi|213964666|ref|ZP_03392866.1| ATP synthase F1, beta subunit [Corynebacterium amycolatum SK46] gi|213952859|gb|EEB64241.1| ATP synthase F1, beta subunit [Corynebacterium amycolatum SK46] Length = 479 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 167/299 (55%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NA+G +D + LG+ D + + PPA ++ + + +TGI+VID+ TP G Sbjct: 101 GHVFNAMGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 158 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 159 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 218 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 219 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRM 278 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 279 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 336 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+A +G YP V+PL S SR+ + + +E ++ + +++ + +E +DI I G Sbjct: 337 ELDRSIASKGIYPAVNPLTSTSRILEPSIVGEEHYRVAQQVINILQKNKELQDIIAILG 395 >gi|217968672|ref|YP_002353906.1| F0F1 ATP synthase subunit beta [Thauera sp. MZ1T] gi|217505999|gb|ACK53010.1| ATP synthase F1, beta subunit [Thauera sp. MZ1T] Length = 466 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 154/299 (51%), Gaps = 10/299 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID + +L I K P + +TGI+VID+ P G Sbjct: 90 LGRIMDVLGRPIDDAGPIETDELR-AIHQKAPKFDELSPSVELLETGIKVIDLICPFAKG 148 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 149 GKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G + Sbjct: 208 VAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRM 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + LD + Sbjct: 268 PSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTV 325 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394 VL+R +A G YP VDPL S SR D +E V+ + + +++E RDI I G Sbjct: 326 VLSRDIAALGIYPAVDPLDSTSRQLDPLVVGEEHYNVARQVQMTLQKYKELRDIIAILG 384 >gi|295394660|ref|ZP_06804879.1| ATP synthase F1 sector beta subunit [Brevibacterium mcbrellneri ATCC 49030] gi|294972553|gb|EFG48409.1| ATP synthase F1 sector beta subunit [Brevibacterium mcbrellneri ATCC 49030] Length = 483 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 111/333 (33%), Positives = 172/333 (51%), Gaps = 25/333 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP---PAMNRQRVE---KGFKTGIRVIDIFT 156 G+V N G ++ DS+ D EI + P A N ++E + F+TGI+VID+ T Sbjct: 101 GKVFNVTGDVLN--DSMI--DEPYEITERWPIHRTAPNFDQLESKTQMFETGIKVIDLLT 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ M R D + + VGER RE + I + Sbjct: 157 PYVLGGKIGLFGGAGVGKTVLIQEMITRVAQDHGGVSVFAGVGERTREGNDLIHEMDESG 216 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 L K+ +V DE P R LT +T+AEYF + +VLL +D+I RF + E++T Sbjct: 217 VLDKTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVST 276 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + Sbjct: 277 LLGRMPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAH 334 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPLAS SR+ D + D + ++ + +E +DI Sbjct: 335 LDATTELSRDIASRGLYPAVDPLASSSRILDPLYVGQDHYDTAVRVKQILQKNKELQDII 394 Query: 391 LIGGYRPGVDLILDK---AVHQVPIIYDFLKQS 420 I GVD + ++ VH+ I FL Q+ Sbjct: 395 AI----LGVDELSEEDKLTVHRARRIEQFLSQN 423 >gi|71370860|gb|AAZ30659.1| ATP synthase beta subunit [Sycon lingua] Length = 427 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P ++ ++ +TGI+V+D+ P G Sbjct: 64 LGRIMNVIGEPIDERGPI-NAKATAPIHAEAPEFVDMSVEQEILETGIKVVDLLAPYAKG 122 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + + Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIVGGVIVL 181 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269 K +V +E P R LT +T+AEYF K G +VLL +D+I RF + E+ Sbjct: 182 DKPGSKVALVYGQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSEV 241 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + ++G+IT+V ++ V D+ DP + Sbjct: 242 SALLGRIPSAVGYQPTLATDMGSMQERI--TTTKEGSITSVQAIYVPADDLTDPAPATTF 299 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D E + S+ ++ ++ +D Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGQEHYSIARSVQKILQDYKSLQD 359 Query: 389 IRLIGG 394 I I G Sbjct: 360 IIAILG 365 >gi|74220566|dbj|BAE31497.1| unnamed protein product [Mus musculus] Length = 529 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT + +AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLAVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|320407243|gb|ADW27397.1| ATP synthase beta subunit [Nephasoma pellucidum] Length = 377 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 162/310 (52%), Gaps = 25/310 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR++N +G+PID +G + + S + P VE +TGI+V+D+ P Sbjct: 71 LGRIMNVIGEPIDE-----RGPIPSKAFSGIHQEAPEFTEMSVEXEILETGIKVVDLLAP 125 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREV----REFIED- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 126 YSKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREXNDLYHEMIESG 184 Query: 209 --YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 185 VIXLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 244 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++ + ERI + +KG+IT+V ++ V D+ DP Sbjct: 245 GSEVSALLGRIPSAVGYQPTLATDXGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAP 302 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R +AE G YP VDPL S+SR+ D +E V+ ++ ++ + Sbjct: 303 ATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRILDPNVVGEEHXNVARAVQKILQDHK 362 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 363 SLQDIIAILG 372 >gi|148380580|ref|YP_001255121.1| V-type ATPase, B subunit [Clostridium botulinum A str. ATCC 3502] gi|153932485|ref|YP_001384867.1| V-type ATP synthase subunit B [Clostridium botulinum A str. ATCC 19397] gi|153937604|ref|YP_001388337.1| V-type ATP synthase subunit B [Clostridium botulinum A str. Hall] gi|171769225|sp|A7FWQ6|VATB_CLOB1 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|172047889|sp|A5I556|VATB_CLOBH RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|148290064|emb|CAL84183.1| v-type sodium ATP synthase subunit B [Clostridium botulinum A str. ATCC 3502] gi|152928529|gb|ABS34029.1| V-type sodium ATPase, B subunit [Clostridium botulinum A str. ATCC 19397] gi|152933518|gb|ABS39017.1| V-type sodium ATPase, B subunit [Clostridium botulinum A str. Hall] Length = 461 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 13/325 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G+ G+V+ IN D +V + G + + F + S GRV + Sbjct: 34 LHNGEK--RRGKVLEINKDKAMVQLFEGSAGINLKGAKVKFLGKPLELGVSEDMLGRVFD 91 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P DG + D ++I + R ++ +TG+ ID L GQ++ VF Sbjct: 92 GLGNPKDGGPKIIP-DKKLDINGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVF 150 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ + L + AR SD V+ + +G E + FI+D+ + ++V+ Sbjct: 151 SGSGLPHAELAAQIARQAKVLNSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRAVLF 210 Query: 221 VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + KG +VL+I+ IT + ++RE++ E+P Sbjct: 211 INLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEVPGR 270 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP ++++L L ER G ++G+IT + + + D+ PI D I +G I+L+ Sbjct: 271 RGYPGYLYTDLSTLYERAGRILGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILS 330 Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364 R L ++G PP+D L S+SRL DK Sbjct: 331 RELYKKGIMPPIDVLPSLSRLKDKG 355 >gi|302035755|ref|YP_003796077.1| ATP synthase F1 subunit beta [Candidatus Nitrospira defluvii] gi|300603819|emb|CBK40151.1| ATP synthase F1, beta subunit [Candidatus Nitrospira defluvii] Length = 480 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 159/306 (51%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN LG+P+D + K + I P ++ + +TGI+V+D+ P G Sbjct: 93 LGRLINVLGEPVDEKGPI-KAKKTYPIHRPAPRLEDQDTKTEVLETGIKVVDLLEPYSKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------G 211 ++G+F G+G+GK+ ++ + + + VGER RE + + Sbjct: 152 GKVGLFGGAGVGKTVIIMELINNIALHHGGFSVFAGVGERTREGNDLWHEMQESKVIDPD 211 Query: 212 DNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D+ K K+ +V +E P R LT + +AE+F + +VLL +D+I RF + E+ Sbjct: 212 DHTKSKAALVYGQMNEPPGARLRVALTGLAVAEFFRDEENQDVLLFVDNIFRFTQAGSEV 271 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 272 SALLGRMPSAVGYQPNLSTEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATAF 329 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LAE G YP VDPL S SR+ D +E K+ + ++ R+++ +D Sbjct: 330 AHLDATTVLSRQLAELGIYPAVDPLDSTSRILDPQVIGEEHYKVARGVQSVLQRYKDLQD 389 Query: 389 IRLIGG 394 I I G Sbjct: 390 IIAILG 395 >gi|251771544|gb|EES52121.1| ATP synthase F1, beta subunit [Leptospirillum ferrodiazotrophum] Length = 462 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/303 (31%), Positives = 162/303 (53%), Gaps = 17/303 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNR-QRVEKGFKTGIRVIDIFTP 157 GR+++ LG PID G +S E M + PPA + + F+TGI+V+D+ P Sbjct: 82 LGRMMDVLGAPIDDG-----GPISTEHMRPIHVDPPAFDELASATEVFETGIKVVDLIAP 136 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN- 213 G + G+F G+G+GK+ ++ R+ + + + VGER RE + + Sbjct: 137 FAKGGKTGLFGGAGVGKTVIIMELIRNIAMEHGGFSVFAGVGERTREGNDLWNEMNESKV 196 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272 + K+ +V +E P +R LT + AE+F + + +VL +D+I RF + E++ Sbjct: 197 IDKTSLVYGQMNEPPGVRLRVALTGLAQAEFFRDEENRDVLFFVDNIFRFTLAGAEVSAL 256 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ E+ +L ERI + +KG+IT+V +V V D+ DP + + L Sbjct: 257 LGRMPSAVGYQPTLAVEMGQLQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHL 314 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391 D +VL+R +AE G YP VDPL S SR+ D +E V+ ++ + ++++ +DI Sbjct: 315 DATVVLSRQIAELGIYPAVDPLDSTSRILDPMIIGEEHYNVARAVQKTLQKYKDLQDIIA 374 Query: 392 IGG 394 I G Sbjct: 375 ILG 377 >gi|258571577|ref|XP_002544592.1| ATP synthase F1, beta subunit [Uncinocarpus reesii 1704] gi|237904862|gb|EEP79263.1| ATP synthase F1, beta subunit [Uncinocarpus reesii 1704] Length = 521 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + KG I ++ P + + + TGI+V+D+ P G Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARG 190 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGAMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 367 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D D+ + S + ++ ++ +DI Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGDDHYQTASRVQQMLQEYKSLQDI 427 Query: 390 RLIGG 394 I G Sbjct: 428 IAILG 432 >gi|121282047|gb|ABM53601.1| putative ATP synthase beta chain [uncultured bacterium CBNPD1 BAC clone 2089] Length = 480 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/299 (32%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 G V N G +D D + EI P + ++ F+TGI+VID+ TP G Sbjct: 99 LGHVWNVWGDVLDADPKEFENIERWEIHRSAPAFDTLEPSKRMFETGIKVIDLLTPYLAG 158 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKS 217 +IG+F G+G+GK+ L++ M R S + + VGER RE + +E +K+ Sbjct: 159 GKIGLFGGAGVGKTVLITEMINRVASKHGGVSVFAGVGERTREGTDLRLEMEESGVFEKA 218 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+A+T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 219 ALVFGQMDEPPGVRLRVALSALTMAEYFRDVQNQDVLLFVDNIFRFVQAGSEVSTLLGRM 278 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + LD Sbjct: 279 PSAVGYQPTLADEMGQLQERI--TSTRGRSITSLQAVYVPADDYTDPAPFTTFTFLDATT 336 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPLAS S + D ++ + ++ R++E +DI I G Sbjct: 337 ELSRQIASLGIYPAVDPLASTSTILTPETVGDRHYQVARRVQEILQRYKELQDIIAILG 395 >gi|153938545|ref|YP_001391923.1| V-type ATP synthase subunit B [Clostridium botulinum F str. Langeland] gi|170754730|ref|YP_001782239.1| V-type ATP synthase subunit B [Clostridium botulinum B1 str. Okra] gi|170759006|ref|YP_001787943.1| V-type ATP synthase subunit B [Clostridium botulinum A3 str. Loch Maree] gi|171769218|sp|A7GGL3|VATB_CLOBL RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|229558011|sp|B1IJM7|VATB_CLOBK RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|238688525|sp|B1KXT5|VATB_CLOBM RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|152934441|gb|ABS39939.1| V-type ATPase, B subunit [Clostridium botulinum F str. Langeland] gi|169119942|gb|ACA43778.1| V-type sodium ATPase, B subunit [Clostridium botulinum B1 str. Okra] gi|169405995|gb|ACA54406.1| V-type sodium ATPase, B subunit [Clostridium botulinum A3 str. Loch Maree] gi|295319943|gb|ADG00321.1| V-type ATPase, B subunit [Clostridium botulinum F str. 230613] Length = 461 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 13/325 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G+ G+V+ IN D +V + G + + F + S GRV + Sbjct: 34 LHNGEK--RRGKVLEINKDKAMVQLFEGSAGINLKGAKVKFLGKPLELGVSEDMLGRVFD 91 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P DG + D ++I + R ++ +TG+ ID L GQ++ VF Sbjct: 92 GLGNPKDGGPKIIP-DKKLDINGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVF 150 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ + L + AR SD V+ + +G E + FI+D+ + ++V+ Sbjct: 151 SGSGLPHAELAAQIARQAKVLNSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRAVLF 210 Query: 221 VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + KG +VL+I+ IT + ++RE++ E+P Sbjct: 211 INLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEVPGR 270 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP ++++L L ER G ++G+IT + + + D+ PI D I +G I+L+ Sbjct: 271 RGYPGYLYTDLSTLYERAGRILGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILS 330 Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364 R L ++G PP+D L S+SRL DK Sbjct: 331 RELYKKGIMPPIDVLPSLSRLKDKG 355 >gi|224823532|ref|ZP_03696641.1| ATP synthase F1, beta subunit [Lutiella nitroferrum 2002] gi|224603987|gb|EEG10161.1| ATP synthase F1, beta subunit [Lutiella nitroferrum 2002] Length = 464 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG P+D + + I P + +TGI+VID+ P Sbjct: 80 AATLGRIMDVLGNPVDEAGPVAT-ETRRAIHQPAPKFDELSSATELLETGIKVIDLLCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AE F + KG +VL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEQFRDEKDENGKGRDVLFFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ RL ERI + ++G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKEGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD +VL+R +A G YP VDPL S SR D DE V+ + + +++E Sbjct: 316 TFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGDEHYSVARGVQTTLQKYKEL 375 Query: 387 RDIRLIGG 394 RDI I G Sbjct: 376 RDIIAILG 383 >gi|119350453|gb|ABL63177.1| AtpB [Atractomorpha porcata] Length = 391 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + ++ I P ++ F+TGI+V+D+ P G Sbjct: 38 GRIFNVLGEPVDNMGPVNNEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 96 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 97 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 156 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + E Sbjct: 157 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 214 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 215 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 272 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 273 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYSCAQSIKKTLQRYKEL 331 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 332 QDIIAILG 339 >gi|111018473|ref|YP_701445.1| F0F1 ATP synthase subunit beta [Rhodococcus jostii RHA1] gi|118573737|sp|Q0SGP9|ATPB_RHOSR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|110818003|gb|ABG93287.1| H(+)-transporting two-sector ATPase beta subunit [Rhodococcus jostii RHA1] Length = 483 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 164/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG D D+ G G D + + PPA ++ + + +TGI+VID+ TP Sbjct: 105 GHVFNALG---DCLDAPGTGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 161 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ Sbjct: 162 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQD 221 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF +G +VLL +D+I RF + E++T G Sbjct: 222 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGR 281 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 282 MPSAVGYQPTLADEMGELQERI--TSTRGRSITSLQAIYVPADDYTDPAPATTFAHLDAT 339 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +++ G YP VDPL S SR+ + A+ ++ + + ++ +++E +DI I G Sbjct: 340 TELSRPISQMGIYPAVDPLTSTSRILEPGIVGAEHFRVANEVKRILQKYKELQDIIAILG 399 >gi|73667933|ref|YP_303948.1| V-type ATP synthase subunit B [Methanosarcina barkeri str. Fusaro] gi|121732070|sp|Q46FH4|VATB_METBF RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|72395095|gb|AAZ69368.1| H(+)-transporting ATP synthase, subunit B [Methanosarcina barkeri str. Fusaro] Length = 460 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 106/354 (29%), Positives = 179/354 (50%), Gaps = 36/354 (10%) Query: 60 GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 G+V+ + DIV I G+ +E + VF ++ S GR+++ G+P+DG Sbjct: 42 GEVLDSSSDIVVIQIFEGTTGLDKECGV---VFTGETLKLPASIDLLGRILSGSGEPLDG 98 Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQRIGVFA 168 D L +M +++PP K F +TGI ID L GQ++ +F+ Sbjct: 99 GPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRGQKLPIFS 150 Query: 169 GSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221 SG+ + + AR S+ V+ + +G E + F+ D+ L+++VV + Sbjct: 151 ASGLPHNEIALQIARQAAVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFL 210 Query: 222 ATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 +D+ + R + P A+T AEY + G +VL+IL IT +A ++R++ E+P R Sbjct: 211 NLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEIPGRR 270 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP ++++L L ER G + KG++T + + + GD+ PI D I +G IV++R Sbjct: 271 GYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITEGQIVVSR 330 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSAD----EKKLVSSLTHLIHRFEETRDIR 390 L +G YPP++ L S+SRL + AD + K VS + + E RD+R Sbjct: 331 ELHRKGIYPPINVLPSLSRLMNSGIGADKTREDHKAVSD--QMYAGYAEGRDLR 382 >gi|48477561|ref|YP_023267.1| V-type ATP synthase subunit B [Picrophilus torridus DSM 9790] gi|73920416|sp|Q6L1S8|VATB_PICTO RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|48430209|gb|AAT43074.1| A1AO H+ ATPase subunit B [Picrophilus torridus DSM 9790] Length = 460 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/322 (29%), Positives = 159/322 (49%), Gaps = 11/322 (3%) Query: 60 GQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ R L IV I G S + F FR+ S GR+ N G+PID Sbjct: 43 GQVLETRNGLSIVQIYGSTTGISTSNASVKFTGSTFRLPVSDDMLGRIFNGFGEPIDNGP 102 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + D ++I +R+ + +TGI ID L GQ++ +F+G+G+ + L Sbjct: 103 KIYSKD-KLDINGSAINPYSREEPSEFVQTGISTIDGMNTLVMGQKLPIFSGAGLSHNRL 161 Query: 178 LSMFARSDCFDK------VIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDESPIL 230 + AR K V+ +G E FI ++ +L SV+ + + + + Sbjct: 162 AAQIARQAKTLKGGENFGVVFGAIGITSEEANYFINEFQSSGSLSNSVIFLNLASDPSMD 221 Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R + P A+T AEY + + + N+L+IL +T + ++REI++ E+P RGYP ++++ Sbjct: 222 RIVLPRIALTTAEYLAYEKEMNMLVILTDMTNYCEALREISSARNEIPGRRGYPGYMYTD 281 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 L + ER G G+IT + + + GD+ +P+ D I +G I L+R L + YP Sbjct: 282 LSTIYERAGKIRGRNGSITQIPILTMPGDDITNPVPDLTGYITEGQITLSRDLNKRNIYP 341 Query: 350 PVDPLASVSRLADKAWSADEKK 371 VD L S+SRL ++ +D + Sbjct: 342 EVDVLLSLSRLMNQGIGSDHTR 363 >gi|284999815|dbj|BAI67808.1| ATP synthase beta-subunit [Chloromonas rubrifilum] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRSAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|83643803|ref|YP_432238.1| F0F1 ATP synthase subunit beta [Hahella chejuensis KCTC 2396] gi|83631846|gb|ABC27813.1| ATP synthase F1, beta subunit [Hahella chejuensis KCTC 2396] Length = 459 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 156/300 (52%), Gaps = 10/300 (3%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P A C GR++N G+P+DG ++ + D I P TGI+V+D+ Sbjct: 82 PVAESCLGRLLNIFGEPLDGGPAI-ETDHYRNIHHSPAPLNELTAQGDLLPTGIKVVDLL 140 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGD 212 P G + G+F G+G+GK+ L+ M A + V + S +GER RE E D Sbjct: 141 CPFIRGGKAGLFGGAGVGKTVLIMEFMHAIAHLHQGVSVFSGIGERIREAHELWRDMQDA 200 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 + ++++V DESP +R L+A+ AEYF S +VLL++D++ RF + E++ Sbjct: 201 GVMDRALLVFGQMDESPGVRFRVSLSALAYAEYFRDSLRRDVLLVMDNVFRFVQAGAEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 + G +P GY ++ SE+ L +RI + G IT+V +V V D+ DP ++ S Sbjct: 261 SLLGRMPATVGYQPTLGSEVAELEDRI--TSSLHGAITSVQAVYVPADDMTDPAVTTILS 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389 LD ++L+R+ A +G YP VDPL S S+ D+ A ++ + R++E DI Sbjct: 319 HLDTSVILSRTQAAKGLYPAVDPLLSGSKAMDRHTLGAAHYTAAEAVRGHLARYKELEDI 378 >gi|21956012|dbj|BAC06376.1| ATP synthase beta-subunit [Vitreochlamys pinguis] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|320409258|gb|ADW27220.1| ATP synthase beta subunit [Terebratalia transversa] Length = 365 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/282 (34%), Positives = 149/282 (52%), Gaps = 16/282 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+PID + D I P ++ ++ TGI+V+ Sbjct: 22 IRIPVGQETLGRIINVIGEPIDERGPI-LTDKRSGIHQDAPEFVDMSVAQEILVTGIKVV 80 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 81 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 139 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D+ K +V +E P R LT +++AEYF +G +VLL +D+I Sbjct: 140 MIESGVISLKDDSSKVSLVYGQMNEPPGARARVALTGLSVAEYFRDDEGQDVLLFIDNIF 199 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 200 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDL 257 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD VL+R +AE G YP VDPL S+SR+ D Sbjct: 258 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSISRILD 299 >gi|194033266|ref|YP_002000428.1| ATP synthase CF1 beta subunit [Oedogonium cardiacum] gi|156618960|gb|ABU88157.1| ATP synthase CF1 beta subunit [Oedogonium cardiacum] gi|186968883|gb|ACC97206.1| CF1 beta subunit of ATP synthase [Oedogonium cardiacum] Length = 482 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 20/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + + + I P + F++GI+V+D+ P G Sbjct: 98 GRIFNVLGEPVDNMGPV-QTEEKLPIHRPAPAFTDLDTRLSIFESGIKVVDLLAPYRRGG 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +ED Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIVEDN 216 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 217 LGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 274 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 275 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 332 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 S LD VL+R LA +G YP VDPLAS S + D + + R++E + Sbjct: 333 FSHLDATTVLSRGLAAKGIYPAVDPLASTSTMLQPWIVGDAHYNCAQKVKETLQRYKELQ 392 Query: 388 DIRLIGG 394 DI I G Sbjct: 393 DIIAILG 399 >gi|78184081|ref|YP_376516.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CC9902] gi|118573770|sp|Q3AZK5|ATPB_SYNS9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|78168375|gb|ABB25472.1| ATP synthase F1, beta subunit [Synechococcus sp. CC9902] Length = 487 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + K + I + P + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPV-KTKTTAPIHREAPKLTELETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ER+ + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGTLQERV--ASTVEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VLNR+LA +G YP VDPL S S + A DE + ++ + R++E Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSSSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|311696880|gb|ADP99753.1| F0F1 ATP synthase subunit beta [marine bacterium HP15] Length = 463 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 155/295 (52%), Gaps = 13/295 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N G P+D + + ++PP + + V +TGI+ ID+ +P+ G Sbjct: 93 GRMLNVFGAPVDNQPVPATSE--RRAIHQLPPLLEDRVVRSQILETGIKAIDLLSPIERG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN--LKK 216 + G+F G+G+GK+ L++ + +SL +GER RE E + +G+ L+ Sbjct: 151 GKTGLFGGAGVGKTVLITELINNTVQQHKGVSLFCGIGERSREAEELYRE-MGEAGVLEN 209 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 +V++ +E P +R + TA+T+AEYF + +VLL++D+I RF + E++ G Sbjct: 210 TVMLFGQMNEVPGVRFLIGKTALTMAEYFRDEQHRDVLLLIDNIFRFVQAGSEVSGLLGR 269 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P GY ++ +EL L ERI + IT+V +V V D+ DP A + S L G Sbjct: 270 MPSRVGYQPTLATELAELEERI--TSTHSAAITSVQAVYVPADDFTDPAAAHIFSHLSGS 327 Query: 336 IVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 +VL+R A EG YP +DPLAS S L + ++ + +EE RDI Sbjct: 328 VVLSRKRASEGLYPAIDPLASSSVMLTPSVVGQRHYDIARAVRRTLAEYEELRDI 382 >gi|194291166|ref|YP_002007073.1| F0F1 ATP synthase subunit beta [Cupriavidus taiwanensis LMG 19424] gi|226740184|sp|B3R7L5|ATPB_CUPTR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|193225001|emb|CAQ71012.1| F1 sector of membrane-bound ATP synthase, beta subunit [Cupriavidus taiwanensis LMG 19424] Length = 467 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + +L I K P +TGI+VID+ P G Sbjct: 92 GRIMDVLGRPIDEAGPIASDELRA-IHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D + + ++ + + R++E RDI I G Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGTEHYEVARRVQQTLQRYKELRDIIAILG 385 >gi|302306746|ref|NP_983117.2| ABR169Wp [Ashbya gossypii ATCC 10895] gi|299788666|gb|AAS50941.2| ABR169Wp [Ashbya gossypii ATCC 10895] Length = 505 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 105/307 (34%), Positives = 162/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR++N +G PID + M I + PPA Q E + +TGI+V+D+ P Sbjct: 119 LGRILNVVGDPIDERGPI-NSKTRMPIHAD-PPAYVEQSTEAEVLETGIKVVDLLAPYAR 176 Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD 212 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 177 GGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMRETGV-I 234 Query: 213 NLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 NL+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 235 NLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 294 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 295 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 352 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D + E + + + + ++ + Sbjct: 353 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATKVQQTLQAYKSLQ 412 Query: 388 DIRLIGG 394 DI I G Sbjct: 413 DIIAILG 419 >gi|227874288|ref|ZP_03992476.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268] gi|227839862|gb|EEJ50304.1| H(+)-transporting two-sector ATPase [Oribacterium sinus F0268] Length = 464 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/327 (31%), Positives = 169/327 (51%), Gaps = 16/327 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG P+D + + + I P + + +TGI+V+D+ P G Sbjct: 89 GRIFNILGNPVD-EKPAPETEERWAIHRPAPSFEEQTPATEILETGIKVVDLICPYAKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ + IS+ VGER RE + + L K+ Sbjct: 148 KIGLFGGAGVGKTVLIMELIHNVATAHGGISVFTGVGERTREGNDLYGEMKESGVLDKTA 207 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L+ +T+AEYF K +VLL +D+I RF + E++ G +P Sbjct: 208 LVYGQMNEPPGARMRVALSGLTMAEYFRDVKHQDVLLFIDNIFRFTQAGSEVSALLGRMP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP + + LD V Sbjct: 268 SAVGYQPTLATDMGALQERI--TSTKQGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYR 396 L+R +A +G YP VDPL S SR+ +E V+ + ++ R++E +DI I Sbjct: 326 LSRDIASKGIYPAVDPLDSTSRILTPEIVGEEHYQVARGVQQVLQRYKELQDIIAI---- 381 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ +V + I +FL QS Sbjct: 382 MGMDELSEEDKISVFRARKIQNFLSQS 408 >gi|4519290|dbj|BAA75560.1| ATP synthase beta-subunit [Eudorina unicocca] gi|4519292|dbj|BAA75561.1| ATP synthase beta-subunit [Eudorina unicocca] gi|14020801|dbj|BAB47545.1| ATP synthase beta-subunit [Eudorina unicocca] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|300933624|ref|ZP_07148880.1| F0F1 ATP synthase subunit beta [Corynebacterium resistens DSM 45100] Length = 482 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 165/299 (55%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D + LG+ D + + PPA ++ + + +TGI+VID+ TP G Sbjct: 104 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 161 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 162 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 221 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 222 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRM 281 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 282 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 339 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+A +G YP V+PL S SR+ + + ++ + H++ + +E +DI I G Sbjct: 340 ELDRSIASKGIYPAVNPLTSTSRILEPGIVGERHYEVAQRVIHILQKNKELQDIIAILG 398 >gi|238881792|gb|EEQ45430.1| ATP synthase beta chain, mitochondrial precursor [Candida albicans WO-1] Length = 415 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 162/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID D + I ++ P + + + +TGI+V+D+ P G Sbjct: 29 LGRIINVVGEPID-DRGPIECKEKKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARG 87 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 88 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 146 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 147 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 204 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 205 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 262 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D + E + + + + ++ + Sbjct: 263 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATGVQQTLQAYKSLQ 322 Query: 388 DIRLIGG 394 DI I G Sbjct: 323 DIIAILG 329 >gi|313634840|gb|EFS01260.1| ATP synthase F1, beta subunit [Listeria seeligeri FSL N1-067] gi|313639460|gb|EFS04314.1| ATP synthase F1, beta subunit [Listeria seeligeri FSL S4-171] Length = 456 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 120/403 (29%), Positives = 201/403 (49%), Gaps = 28/403 (6%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + L +V++ + I + + IGE L G +V + GR + G Sbjct: 33 EYETHQG---NYLAEVVQ-HTGINTVSAIAIGEVSGLARGTIVNNLGRPIEVPVGEKVLG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG ++ I P ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGKPE-PDTEVKWPIFRSQPKLSELDTNKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGRE----VREFIEDYLGDNLKKS 217 G+F G+G+GKS L+ + + + VGER RE +E E + L ++ Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNAVFTGVGERVREGIGLYKELEESGV---LPQT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G++ Sbjct: 205 TVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKI 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD I Sbjct: 265 PITGGYQSTLSKEVGNFQDRIASTKD--GSITSIQCVFLPADDIDDPSAVATFSHLDSTI 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL RS+A G +P V+PL S SR + + + L + ++ R+ E ++I + G Sbjct: 323 VLERSIAALGIFPAVNPLQSSSRALNPNFVGERHYNLAVQVKFILQRYMELQEIINVLGI 382 Query: 396 RPGVDLILDKA-VHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433 D DK+ V++ I +FL Q S SE +F EI Sbjct: 383 AELSD--EDKSLVNRARKIRNFLSQPFYVSEKFTGSEGIFVEI 423 >gi|254421831|ref|ZP_05035549.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7335] gi|196189320|gb|EDX84284.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7335] Length = 486 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + S+ I P ++ + F+TGI+V+D+ P Sbjct: 95 ATLGRIFNVLGEPVDEKGPV-DAESSLPIHRPAPELVDLETKPAVFETGIKVVDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL-- 210 G ++G+F G+G+GK+ L+ + + +S+ VGER RE EFIE + Sbjct: 154 RGGKVGLFGGAGVGKTVLIQELINNIAKEHSGVSVFGGVGERTREGNDLYNEFIESGVIN 213 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L +S V V +E P R L+A+T+AEYF +VLL +D+I RF + Sbjct: 214 ADDLSQSKVALVYGQMNEPPGARMRVALSALTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDMGDLQERI--ASTTDGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD L+R+LA +G YP VDPL S S + +E ++ + R++E Sbjct: 332 TFAHLDATTTLSRALASKGIYPAVDPLDSTSTMLQPDIVGEEHYGTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|91178128|gb|ABE27299.1| mitochondrial F-ATPase beta subunit [Candida parapsilosis] Length = 337 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 28/310 (9%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+IN G PID +G + + I ++ P + + + +TGI+V+D+ P Sbjct: 20 GRIINVTGDPIDE-----RGPIECKKRNPIHAEPPSFIEQSTAAEVLETGIKVVDLLAPY 74 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE--- 207 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E Sbjct: 75 ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV 133 Query: 208 -DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 134 INLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQA 191 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP Sbjct: 192 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAP 249 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SRL D A E + + + + ++ Sbjct: 250 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVATGVQQTLQAYK 309 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 310 SLQDIIAILG 319 >gi|74225421|dbj|BAE31630.1| unnamed protein product [Mus musculus] Length = 529 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 160/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT + +AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLAVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|261403718|ref|YP_003247942.1| ATP synthase, B subunit [Methanocaldococcus vulcanius M7] gi|261370711|gb|ACX73460.1| ATP synthase, B subunit [Methanocaldococcus vulcanius M7] Length = 470 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/332 (30%), Positives = 166/332 (50%), Gaps = 16/332 (4%) Query: 59 LGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116 +GQV+ R L +V + G + + F +I S GR+ N GKPIDG Sbjct: 46 MGQVLEAREGLAVVQVFEGTTGLSTNQTRVRFTGRTAKIGVSMEMLGRIFNGAGKPIDGG 105 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + ++I ++R+ +TGI ID L GQ++ +F+GSG+ + Sbjct: 106 PEIVP-EKELDINGYPLNPVSRKVPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQ 164 Query: 177 LLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 L + AR V+ + +G E F+E++ L+++VV + +D+ I Sbjct: 165 LAAQIARQAKVRGEGEKFAVVFAAMGITSEEANFFMEEFRKTGALERAVVFINLADDPAI 224 Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R + P A+T+AEY + + D +VL+IL +T + ++REI+ E+P RGYP +++ Sbjct: 225 ERILTPRLALTVAEYLAYEKDMHVLVILTDMTNYCEALREISAARNEVPGRRGYPGYMYT 284 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L + ER G + G IT + + + D+ PI D I +G IVL+R L +G Y Sbjct: 285 DLATIYERAGRVKGRIGTITQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY 344 Query: 349 PPVDPLASVSRLADKAWSA-----DEKKLVSS 375 PPVD L S+SRLA D KK+++ Sbjct: 345 PPVDVLPSLSRLAGNGQGPGKTREDHKKVINQ 376 >gi|4519304|dbj|BAA75567.1| ATP synthase beta-subunit [Tetrabaena socialis] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PID ++ D ++ I P + F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPIDNMGTVFVED-TLPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFVDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ T + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQTVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|163787220|ref|ZP_02181667.1| H(+)-transporting two-sector ATPase, beta subunit [Flavobacteriales bacterium ALC-1] gi|159877108|gb|EDP71165.1| H(+)-transporting two-sector ATPase, beta subunit [Flavobacteriales bacterium ALC-1] Length = 502 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 107/330 (32%), Positives = 163/330 (49%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG L K G+ + I + P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGLGDLPKAGEAGLPIHRQAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 208 -DYL------GDNLKK----------SVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D++ G +LKK + V +E P R L+ +TIAEYF Sbjct: 210 DDFMHSMEEGGWDLKKVDKSAMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 270 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 387 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + L+ R++E +DI I G Sbjct: 388 LGDEHYDCAQRVKELLQRYKELQDIIAILG 417 >gi|4519306|dbj|BAA75568.1| ATP synthase beta-subunit [Basichlamys sacculifera] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+PID ++ D ++ I P + F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPIDNMGTVFVED-TLPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFVDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ T + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQTVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|4519280|dbj|BAA75555.1| ATP synthase beta-subunit [Volvox globator] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVD-NMGIVKVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|322704573|gb|EFY96166.1| ATP synthase beta chain [Metarhizium anisopliae ARSEF 23] Length = 417 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 154/307 (50%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN G PID + K D + I P + + + TGI+V+D+ P Sbjct: 27 ATLGRIINVTGDPIDERGPI-KTDKFLPIHCDPPEFVAQSTTAEVLVTGIKVVDLLAPYA 85 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 86 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 144 Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 145 QLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDHEGQDVLLFIDNIFRFTQAGAE 204 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 205 VSALLGRIPSAVGYQPTLAVDMGVMQERI--TTTDKGSITSVQAVYVPADDLTDPAPATT 262 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPLAS SR+ D E + + ++ ++ + Sbjct: 263 FAHLDATTVLSRGISEIGIYPAVDPLASTSRVLDPRIVGQEHYDTATRVQQILQEYKSLK 322 Query: 388 DIRLIGG 394 DI I G Sbjct: 323 DIIAILG 329 >gi|298370407|ref|ZP_06981723.1| ATP synthase F1, beta subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298281867|gb|EFI23356.1| ATP synthase F1, beta subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 465 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 155/307 (50%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG P+D G D + I P + +TGI+VID+ P Sbjct: 83 LGRIVDVLGTPVD---EAGPIDTNKHRAIHQTAPKFDELSATTELLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AEYF S KG +VL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGRDVLFFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD +VL+R +A G YP VDPL S SR D E V+ + + +++E R Sbjct: 317 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELR 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|284999817|dbj|BAI67809.1| ATP synthase beta-subunit [Gloeomonas kupfferi] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|119350447|gb|ABL63174.1| AtpB [Ankyra starrii] Length = 388 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + ++ I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNMGPVNNEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + E Sbjct: 158 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 274 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYSCAQSIKKTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|4519346|dbj|BAA75588.1| ATP synthase beta-subunit [Chlamydomonas moewusii] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + D ++ I K P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGPVKVED-TLPIHRKAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W +K + ++ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGDKHYQTAQNVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|11559340|dbj|BAB18828.1| ATP synthase beta-subunit [Volvulina steinii] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGTV-KVEETLPIHRTAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 150 NLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 210 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETR 387 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E + Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKELQ 326 Query: 388 DIRLIGG 394 DI I G Sbjct: 327 DIIAILG 333 >gi|206603286|gb|EDZ39766.1| ATP synthase F1, beta subunit [Leptospirillum sp. Group II '5-way CG'] Length = 463 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 163/308 (52%), Gaps = 27/308 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNR-QRVEKGFKTGIRVIDIFTP 157 GR+++ LG P+D G ++ E + + PP + F+TGI+V+D+ P Sbjct: 83 LGRMMDVLGNPVDE-----AGPITAEARRSIHREPPGFEELASATEVFETGIKVVDLIAP 137 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL 214 G + G+F G+G+GK+ ++ R+ + + + VGER RE + L + + Sbjct: 138 FAKGGKTGLFGGAGVGKTVIIMELIRNIAMEHGGFSVFAGVGERTREGND-----LWNEM 192 Query: 215 KKSVVVVATS------DESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 K+S V+ TS +E P +R LT +T AEYF + +VL +D+I RF + Sbjct: 193 KESKVIDKTSLVYGQMNEPPGVRLRVALTGLTQAEYFRDEERRDVLFFIDNIFRFTLAGA 252 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + +KG+IT+V +V V D+ DP + Sbjct: 253 EVSALLGRMPSAVGYQPTLAVEMGGLQERI--TSTKKGSITSVQAVYVPADDLTDPAPAT 310 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 S LD +VL+R +AE G YP VDPL S SR+ D DE V+ ++ + ++++ Sbjct: 311 TFSHLDATVVLSRQIAELGIYPAVDPLDSTSRILDPMIVGDEHYGVARAVQKTLQKYKDL 370 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 371 QDIIAILG 378 >gi|52788859|gb|AAU87399.1| ATP synthase beta chain [Saccoloma inaequale] Length = 383 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 160/315 (50%), Gaps = 26/315 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + ++ I P F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NLGPVENSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGAGERTREGNDLYMEMKESKVIN 123 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 301 LQDIIAI----PGLD 311 >gi|298710991|emb|CBJ32298.1| F-type H-ATPase beta subunit [Ectocarpus siliculosus] Length = 508 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 18/308 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + I + P + + ++ TGI+V+D+ P G Sbjct: 118 LGRIMNVIGEPVDERGPI-NSKAKAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKG 176 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL---- 210 +IG+F G+G+GK+ ++ + + + + VGER RE E IE + Sbjct: 177 GKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKIT 236 Query: 211 GDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 D+ K K+ +V +E P R LT +TIAEYF ++G +VLL +D+I RF + Sbjct: 237 EDSTKGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGA 296 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ DP + Sbjct: 297 EVSALLGRIPSAVGYQPTLATDMGMLQERI--TSTNKGSITSVQAVYVPADDLTDPAPAT 354 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEET 386 + LD VL+R +AE G YP VDPL S SR+ D DE + T L+ ++ Sbjct: 355 TFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGL 414 Query: 387 RDIRLIGG 394 ++I I G Sbjct: 415 QEIIAILG 422 >gi|284999821|dbj|BAI67811.1| ATP synthase beta-subunit [Gloeomonas lateperforata] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|255717400|ref|XP_002554981.1| KLTH0F18304p [Lachancea thermotolerans] gi|238936364|emb|CAR24544.1| KLTH0F18304p [Lachancea thermotolerans] Length = 508 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 104/311 (33%), Positives = 164/311 (52%), Gaps = 28/311 (9%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR+IN +G+PID +G + + + + PPA Q + +TGI+V+D+ P Sbjct: 122 LGRIINVVGEPIDE-----RGPILTKKRNPIHAEPPAFVEQSTAAEVLETGIKVVDLLAP 176 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE-- 207 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E Sbjct: 177 YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMRETG 235 Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 + GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF Sbjct: 236 VINLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQ 293 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP Sbjct: 294 AGSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPA 351 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R ++E G YP VDPL S SRL D + E + + + + + Sbjct: 352 PATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDASVVGQEHYDVATQVQQTLQAY 411 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 412 KSLQDIIAILG 422 >gi|183206582|gb|ACC54489.1| ATP synthase beta subunit [Feeria angustifolia] Length = 457 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 9 KGRDNLGQTINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 68 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 69 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 125 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 126 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 184 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 185 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 244 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 245 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 302 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 303 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 362 Query: 389 IRLIGG 394 I I G Sbjct: 363 IITILG 368 >gi|119350451|gb|ABL63176.1| AtpB [Atractomorpha echinata] Length = 392 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + ++ I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNMGPVNNEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + E Sbjct: 158 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 274 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYSCAQSIKKTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|41408549|ref|NP_961385.1| F0F1 ATP synthase subunit beta [Mycobacterium avium subsp. paratuberculosis K-10] gi|41396907|gb|AAS04768.1| AtpD [Mycobacterium avium subsp. paratuberculosis K-10] Length = 402 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D G+ I K PP + + +TG++V+D+ TP G Sbjct: 23 GHVFNALGHCLD-KPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRGG 81 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK + Sbjct: 82 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTA 141 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AE+F + G +VLL +D+I RF + E++T G +P Sbjct: 142 LVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 201 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 202 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 259 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ +G +P VDPLAS S + D +E ++ + ++ R+++ +DI I G Sbjct: 260 LSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILG 317 >gi|56477133|ref|YP_158722.1| F0F1 ATP synthase subunit beta [Aromatoleum aromaticum EbN1] gi|81357643|sp|Q5P4E2|ATPB_AZOSE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|56313176|emb|CAI07821.1| F1-ATP synthase, beta subunit [Aromatoleum aromaticum EbN1] Length = 466 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + +L I +K P +TGI+VID+ P G Sbjct: 91 GRIMDVLGRPIDEAGPIEADELR-PIHAKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 149 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 269 SAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ + + R++E RDI I G Sbjct: 327 LSRDIAALGIYPAVDPLDSTSRQLDPLVVGEEHYNVARQVQVTLQRYKELRDIIAILG 384 >gi|23503603|dbj|BAC20398.1| ATP synthase beta-subunit [Chloromonas reticulata] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAETALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|94312425|ref|YP_585635.1| F0F1 ATP synthase subunit beta [Cupriavidus metallidurans CH34] gi|118573729|sp|Q1LHL0|ATPB_RALME RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|93356277|gb|ABF10366.1| F1 sector of membrane-bound ATP synthase, beta subunit [Cupriavidus metallidurans CH34] Length = 467 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + D I K P +TGI+VID+ P G Sbjct: 92 GRIMDVLGRPIDEAGPI-EADEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D + + ++ + + R++E RDI I G Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGTEHYEVARRVQQTLQRYKELRDIIAILG 385 >gi|226360596|ref|YP_002778374.1| F0F1 ATP synthase subunit beta [Rhodococcus opacus B4] gi|254808161|sp|C1AVZ9|ATPB_RHOOB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226239081|dbj|BAH49429.1| ATP synthase beta chain [Rhodococcus opacus B4] Length = 483 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 164/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG D D+ G G D + + PPA ++ + + +TGI+VID+ TP Sbjct: 105 GHVFNALG---DCLDAPGTGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 161 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ Sbjct: 162 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQD 221 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF +G +VLL +D+I RF + E++T G Sbjct: 222 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGR 281 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 282 MPSAVGYQPTLADEMGELQERI--TSTRGRSITSLQAIYVPADDYTDPAPATTFAHLDAT 339 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +++ G YP VDPL S SR+ + A+ ++ + + ++ +++E +DI I G Sbjct: 340 TELSRPISQMGIYPAVDPLTSTSRILEPGIVGAEHFRVANEVKRILQKYKELQDIIAILG 399 >gi|330752204|emb|CBL87162.1| ATP synthase subunit beta [uncultured Sphingobacteria bacterium] gi|330752246|emb|CBL87203.1| ATP synthase beta subunit [uncultured Sphingobacteria bacterium] gi|330752293|emb|CBL87248.1| ATPase, F1 complex, beta subunit [uncultured Sphingobacteria bacterium] Length = 503 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 105/334 (31%), Positives = 165/334 (49%), Gaps = 47/334 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMS--KVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N +G+PIDG +G D+S+ S + PP E TGI+VID+ P Sbjct: 90 GRLFNVVGEPIDG---IGPVDMSVNTSSIHRKPPRFEDLSTESEVLFTGIKVIDLIEPYV 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIE----D 208 G +IG+F G+G+GK+ L+ + +D + + + VGER RE +RE +E + Sbjct: 147 KGGKIGLFGGAGVGKTVLIQELINNIAKGYDGISVFAGVGERTREGNDLLREMLESGIIN 206 Query: 209 YLGDNL--------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF--- 245 Y D L K+ V +E P R L+ +T+AEY+ Sbjct: 207 YGEDFLHSMEEGGWDLSKVDKSKLKESKATFVFGQMNEPPGARARVALSGLTLAEYYRDG 266 Query: 246 ----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 + G ++L +D+I RF + E++ G +P A GY ++ SE+ + ERI + Sbjct: 267 DLTDPNGGKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGLMQERI--TS 324 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 ++G+IT+V +V V D+ DP + + LD VL+R +A G YP VDPL S SR+ Sbjct: 325 TKRGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIASLGIYPAVDPLDSTSRIL 384 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D A +E + ++ R+ E +DI I G Sbjct: 385 DPAIIGEEHYNTAEKVKQILQRYNELQDIIAILG 418 >gi|298373453|ref|ZP_06983442.1| ATP synthase F1, beta subunit [Bacteroidetes oral taxon 274 str. F0058] gi|298274505|gb|EFI16057.1| ATP synthase F1, beta subunit [Bacteroidetes oral taxon 274 str. F0058] Length = 499 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 114/370 (30%), Positives = 177/370 (47%), Gaps = 46/370 (12%) Query: 65 INLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGD 123 I D V + + IS G V GR P GR++N +G+ IDG L + Sbjct: 52 IGEDTVRCVAMDSTDGISRGMEVESLGRPISMPVGSQVKGRLLNVIGETIDGMKPLDYNE 111 Query: 124 LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178 + + + + PP K TGI+VID+ P G +IG+F G+G+GK+ L+ Sbjct: 112 I--QSIHRDPPKFEDLSTSKEILFTGIKVIDLLAPYLKGGKIGLFGGAGVGKTVLIMELI 169 Query: 179 -SMFARSDCFDKVIISLVGERGRE----VREFIEDYL---GDNLKKSV------------ 218 ++ + + F + + VGER RE +RE IE + G+ KKS+ Sbjct: 170 NNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRYGEEFKKSMEKGDWDLSKVDY 227 Query: 219 ---------VVVATSDESPILRKMAPLTAVTIAEYF----SSKGDNVLLILDSITRFAHS 265 +V +E P R L+ +TIAE F + G+++L +D+I RF + Sbjct: 228 DELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDSGGTGGNDILFFIDNIFRFTQA 287 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ SE+ + ERI + + G+IT+V +V V D+ DP Sbjct: 288 GSEVSALLGRMPSAVGYQPTLASEMGIMQERI--TSTKNGSITSVQAVYVPADDLTDPAP 345 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFE 384 + S LD VL+R ++E G YP VDPL S SR+ D D + L+ R++ Sbjct: 346 ATTFSFLDATTVLDRKISELGIYPAVDPLESTSRILDPNIVGEDHYNTAQRVKQLLQRYK 405 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 406 ELQDIIAILG 415 >gi|227503869|ref|ZP_03933918.1| F0F1 ATP synthase subunit beta [Corynebacterium striatum ATCC 6940] gi|227199492|gb|EEI79540.1| F0F1 ATP synthase subunit beta [Corynebacterium striatum ATCC 6940] Length = 481 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/299 (33%), Positives = 165/299 (55%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D LG+ D + + PPA ++ + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-QPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI S K K +IT++ +V V D++ DP + + LD Sbjct: 281 PSAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATT 338 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP V+PL S SR+ + + + ++ + H++ + +E +DI I G Sbjct: 339 ELDRGIASKGIYPAVNPLTSTSRILEPSIVGEHHYEVAQRVIHILQKNKELQDIIAILG 397 >gi|149384745|gb|ABR25181.1| ATP synthase beta chain [Saccoloma inaequale] Length = 426 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 164/315 (52%), Gaps = 26/315 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + S+ + + PA + + F+TGI+V+D+ P Sbjct: 39 LGRIFNVLGEPVD---NLGPVENSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 96 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGAGERTREGNDLYMEMKESKVIN 155 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 216 EVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332 Query: 386 TRDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 333 LQDIIAI----PGLD 343 >gi|158524730|gb|ABW71259.1| mitochondrial ATP synthase beta subunit [Plumatella repens] Length = 428 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 160/315 (50%), Gaps = 19/315 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 RI GR+IN +G+PID + K D + I + P ++ + TGI+V+D Sbjct: 56 RIPVGPETLGRIINVIGEPIDERGPV-KTDKFLPIHQEAPEFVDMSVQAEILVTGIKVVD 114 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREF 205 + P G +IG+F G+ +GK+ L+ + A++ V VGER RE RE Sbjct: 115 LLAPYAKGGKIGLFGGASVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYREM 173 Query: 206 IE----DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 IE D G K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 174 IEGGVIDLKGKG-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR+ D D + + Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSSSRILDANVIGQDHYDTARGVQKI 350 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 351 LQDYKSLQDIIAILG 365 >gi|326382094|ref|ZP_08203787.1| F0F1 ATP synthase subunit beta [Gordonia neofelifaecis NRRL B-59395] gi|326199520|gb|EGD56701.1| F0F1 ATP synthase subunit beta [Gordonia neofelifaecis NRRL B-59395] Length = 481 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 99/300 (33%), Positives = 165/300 (55%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG D D+ G G D + + PPA ++ + + +TGI+VID+ TP Sbjct: 103 GHVFNALG---DCLDAPGTGRDGEQWGIHRKPPAFDQLEGKTEILETGIKVIDLLTPYVK 159 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ Sbjct: 160 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQD 219 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G Sbjct: 220 TALVFGQMDEPPGTRMRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGR 279 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI ++ +IT++ ++ V D++ DP + + LD Sbjct: 280 MPSAVGYQPTLADEMGELQERITSTKGR--SITSLQAIYVPADDYTDPAPATTFAHLDAT 337 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +++ G YP VDPL S SR+ + + DE ++ + + ++ +++E +DI I G Sbjct: 338 TELSRPISQLGIYPAVDPLTSTSRILEASIVGDEHFRVANEVKRILQKYKELQDIIAILG 397 >gi|8050870|gb|AAF71787.1|AF266738_1 ATP synthase beta subunit [Arbutus unedo] Length = 494 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 105/312 (33%), Positives = 162/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P + + F+TGI+V+D+ Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIELETKLSIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE RE E Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYREMKES 215 Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 216 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 275 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 276 QAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 333 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + DE K+ + + R Sbjct: 334 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRWIVGDEHYKIAQRVKQTLQR 393 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 394 YKELQDIITILG 405 >gi|11559344|dbj|BAB18830.1| ATP synthase beta-subunit [Pandorina morum] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVD-NMGIVKVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|23503613|dbj|BAC20403.1| ATP synthase beta-subunit [Chloromonas serbinowi] Length = 376 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRSAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKRTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|309798527|ref|ZP_07692804.1| ATP synthase F1, beta subunit [Streptococcus infantis SK1302] gi|308117846|gb|EFO55245.1| ATP synthase F1, beta subunit [Streptococcus infantis SK1302] Length = 360 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 143/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ L+ + + IS+ VGER RE Sbjct: 24 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 83 Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + + E ++K+ +V +E P R LT +TIAEYF +G +VLL +D+I Sbjct: 84 GNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNI 143 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +E+ +L ERI + +KG++T++ ++ V D+ Sbjct: 144 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKGSVTSIQAIYVPADD 201 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L R L + G YP VDPLAS SR LA + + + + + Sbjct: 202 YTDPAPATAFAHLDSTTNLERKLVQLGIYPAVDPLASSSRALAPEIVGEEHYAVAAEVKR 261 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ E +DI I G Sbjct: 262 VLQRYHELQDIIAILG 277 >gi|288574840|ref|ZP_06393197.1| H+transporting two-sector ATPase alpha/beta subunit central region [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570581|gb|EFC92138.1| H+transporting two-sector ATPase alpha/beta subunit central region [Dethiosulfovibrio peptidovorans DSM 11002] Length = 470 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/311 (30%), Positives = 161/311 (51%), Gaps = 16/311 (5%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S GRV N G+PIDG + D ++++ +R E+ +TGI ID P Sbjct: 83 SEDMLGRVFNGRGEPIDGGAHI-IADKNIDVNGLPINPFSRDYPEEFIQTGISTIDGMNP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYL 210 + GQ++ +F+G+G+ + + + AR + F V+ + +G E F+ED+ Sbjct: 142 MVRGQKLPIFSGAGLPHNRMAAQLARQANVISGHEAF-AVVFAAMGITFEEASFFMEDFR 200 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268 L+++V+ V +D+ I R P A+T AEY + K +VL+IL +T + ++RE Sbjct: 201 RTGALERTVMYVNLADDPAIERITTPRLALTAAEYLAFEKNMHVLVILTDLTNYCEALRE 260 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I+ E+P RGYP ++++L + ER G + G+IT V + + ++ PI D Sbjct: 261 ISAARKEVPGRRGYPGYLYTDLATMYERAGKIKGRSGSITQVPILTMPENDKTHPIPDLT 320 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRF 383 I +G I+L+ +L +G YPPVD + S+SRL DK D L++ L R Sbjct: 321 GYITEGQIILSPNLHRKGIYPPVDVMPSLSRLKDKGIGKGKTREDHADLMNQLFAAYARG 380 Query: 384 EETRDIRLIGG 394 +E +++ +I G Sbjct: 381 KEAKELAVILG 391 >gi|320532886|ref|ZP_08033656.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 171 str. F0337] gi|320134898|gb|EFW27076.1| ATP synthase F1, beta subunit [Actinomyces sp. oral taxon 171 str. F0337] Length = 478 Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 163/304 (53%), Gaps = 19/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156 G V N G ++ LG G+ +E+ + + PPA ++ + E+ F+TGI+VID+ T Sbjct: 99 GHVFNVTGDVLN----LGPGE-QLEVTERWPIHRQPPAFDQLESKEQMFETGIKVIDLLT 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212 P G +IG+F G+G+GK+ L+ + + +S+ VGER RE + I E Sbjct: 154 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIVEMDEAG 213 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K+ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 214 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVST 273 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + Sbjct: 274 LLGRMPSAVGYQPNLADEMGQLQERI--TSAGGHSITSLQAIYVPADDYTDPAPATTFAH 331 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SRL + E V++ + ++ + +E +DI Sbjct: 332 LDATTELSREIASRGIYPAVDPLTSTSRLLAPGYVGQEHYDVATRVKSILQKNKELQDII 391 Query: 391 LIGG 394 I G Sbjct: 392 AILG 395 >gi|91178140|gb|ABE27305.1| mitochondrial F-ATPase beta subunit [Candida zeylanoides] Length = 337 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 106/310 (34%), Positives = 163/310 (52%), Gaps = 26/310 (8%) Query: 102 CGRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+IN G PID +S + + + S V + N + +E TGI+V+D+ P Sbjct: 19 LGRIINVTGDPIDERGPIESTQRNPIHADPPSFVEQSTNAEVLE----TGIKVVDLLAPY 74 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE--- 207 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E Sbjct: 75 ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGV 133 Query: 208 -DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 134 INLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQA 191 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP Sbjct: 192 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAP 249 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SRL D A E + S++ + ++ Sbjct: 250 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDAAVVGQEHYDVASNVQQTLQAYK 309 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 310 SLQDIIAILG 319 >gi|183206544|gb|ACC54470.1| ATP synthase beta subunit [Campanula mollis] Length = 467 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 29 KGRDNLGQTINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 89 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 145 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 146 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 204 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 205 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 265 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 323 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IITILG 388 >gi|320586098|gb|EFW98777.1| alpha-glucan branching enzyme [Grosmannia clavigera kw1407] Length = 1204 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PID + K D+ I ++ P + + TGI+V+D+ P G Sbjct: 817 GRIMNVTGDPIDERGPI-KTDMRRSIHAEAPAFTEQSTTAEILVTGIKVVDLLAPYARGG 875 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 +IG+F G+G+GK+ L++ A++ V VGER RE + + D Sbjct: 876 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVIQLD 934 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 935 GDSKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSA 994 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 995 LLGRIPSAVGYQPTLAVDMGLMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAH 1052 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 1053 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGDDHYNTATRVQQILQEYKSLQDII 1112 Query: 391 LIGG 394 I G Sbjct: 1113 AILG 1116 >gi|27364454|ref|NP_759982.1| F0F1 ATP synthase subunit beta [Vibrio vulnificus CMCP6] gi|37681435|ref|NP_936044.1| F0F1 ATP synthase subunit beta [Vibrio vulnificus YJ016] gi|320154858|ref|YP_004187237.1| ATP synthase subunit beta [Vibrio vulnificus MO6-24/O] gi|81756325|sp|Q7MGI0|ATPB_VIBVY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81844741|sp|Q8DDG8|ATPB_VIBVU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|27360573|gb|AAO09509.1| ATP synthase F1, beta subunit [Vibrio vulnificus CMCP6] gi|37200187|dbj|BAC96015.1| F0F1-type ATP synthase, beta subunit [Vibrio vulnificus YJ016] gi|319930170|gb|ADV85034.1| ATP synthase beta chain [Vibrio vulnificus MO6-24/O] Length = 467 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 151/304 (49%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G +L I P + + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGEIGAEEL-YSIHRPAPSYEEQSNATELLETGVKVIDLICPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNIEK 204 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDTARGVQQTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|23503605|dbj|BAC20399.1| ATP synthase beta-subunit [Chloromonas insignis] Length = 376 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|302901641|ref|XP_003048480.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729413|gb|EEU42767.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 514 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K D + I + P + + + TGI+V+D+ P G Sbjct: 126 LGRIMNVTGDPIDERGPI-KSDKRLPIHQEAPEFVEQSTSAEILVTGIKVVDLLAPYARG 184 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 185 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVIQL 243 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 244 DGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 303 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 304 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 361 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 362 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGQDHYDTATRVQQILQEYKSLQDI 421 Query: 390 RLIGG 394 I G Sbjct: 422 IAILG 426 >gi|183206542|gb|ACC54469.1| ATP synthase beta subunit [Campanula edulis] Length = 466 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 29 KGRDNLGQTINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 89 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 145 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 146 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 204 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 205 NFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 265 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 323 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IITILG 388 >gi|325285955|ref|YP_004261745.1| ATP synthase F1 subunit beta [Cellulophaga lytica DSM 7489] gi|114545|sp|P13357|ATPB_CYTLY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|145031|gb|AAA23334.1| ATP-synthetase beta subunit [Cellulophaga lytica] gi|324321409|gb|ADY28874.1| ATP synthase F1, beta subunit [Cellulophaga lytica DSM 7489] Length = 502 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 161/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG +L K G + I + P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGLGNLPKSGKDGLPIHREAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 210 DDFMHSMEEGGWDLSKVDKSVMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR LA + Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILAPEI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 D + L+ R++E +DI I G Sbjct: 388 LGKDHYSCAQRVKELLQRYKELQDIIAILG 417 >gi|330991787|ref|ZP_08315737.1| ATP synthase subunit beta [Gluconacetobacter sp. SXCC-1] gi|329761255|gb|EGG77749.1| ATP synthase subunit beta [Gluconacetobacter sp. SXCC-1] Length = 468 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 26/311 (8%) Query: 103 GRVINALGKPIDGD---DSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR++N +G+PID ++G+ + + PA + Q TGI+V+D+ P Sbjct: 80 GRILNVIGEPIDDRGPVQAVGRSSIH-----RAAPAFDEQAAATEILPTGIKVVDLLCPY 134 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL----- 210 G ++G+F G+G+GK+ ++ + +S+ VGER RE + + Sbjct: 135 LKGGKVGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYYEMQDAGVI 194 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 G++ + S V V +E P R L+ VT+AEYF +G +VL +D+I RF Sbjct: 195 KINGESTEGSKVALVYGQMNEPPGARARVALSGVTVAEYFRDVEGQDVLFFVDNIFRFTQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP Sbjct: 255 AGAEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383 + + LD VLNRS+AE G YP VDPL S SR D DE V+ + ++ + Sbjct: 313 PAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVGDEHYQVARDVQRILQTY 372 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 373 KSLQDIIAILG 383 >gi|227537606|ref|ZP_03967655.1| H(+)-transporting two-sector ATPase [Sphingobacterium spiritivorum ATCC 33300] gi|227242492|gb|EEI92507.1| H(+)-transporting two-sector ATPase [Sphingobacterium spiritivorum ATCC 33300] Length = 500 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 110/358 (30%), Positives = 172/358 (48%), Gaps = 49/358 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GRV N +G IDG ++L K + + VPP E TGI+VID+ P G Sbjct: 89 GRVFNVVGDAIDGIENLDK--TNGRPIHNVPPKFEDLSTESEVLFTGIKVIDLLEPYAKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 206 Query: 208 DYLGDNLKKS-----------------VVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ + ++K V +E P R L+ +T+AEYF Sbjct: 207 DHFMEGMEKGEWPLETVDQELMKESKCTFVFGQMNEPPGARARVALSGLTVAEYFRDGEG 266 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + + G Sbjct: 267 DGQGKDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTKNG 324 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ A Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILSPAV 384 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419 DE + ++ R++E +DI I G+D + + + VH+ + FL Q Sbjct: 385 LGDEHYNTAQRVKEILQRYKELQDIIAI----LGMDELSEEDKQTVHRARRVQRFLSQ 438 >gi|183220215|ref|YP_001838211.1| F0F1 ATP synthase subunit beta [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910333|ref|YP_001961888.1| F0F1 ATP synthase subunit beta [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|226740649|sp|B0SDA5|ATPB_LEPBA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740650|sp|B0SLC8|ATPB_LEPBP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|167775009|gb|ABZ93310.1| Beta subunit of the H(+)-transporting two-sector ATPase, F1 sector [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778637|gb|ABZ96935.1| ATP synthase F1, beta subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 468 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 93/299 (31%), Positives = 156/299 (52%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID L K M I P + + F+TGI+VID+ P G Sbjct: 89 LGRIFNVLGEAIDELGDLPKDVKKMPIHRNAPTYEEIKPKTEIFETGIKVIDLLAPYIKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ L+ + + + VGER RE + + + K+ Sbjct: 149 GKTGLFGGAGVGKTVLIQELINNIAKQHGGFSVFAGVGERTREGNDLWNEMKESGVIDKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGEL 276 V+ +E P R L+A+T+AE F + G ++LL +D+I RF+ + E++ G + Sbjct: 209 VLCFGQMNEPPGARLRVALSALTMAENFRDESGSDILLFVDNIFRFSQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ L ERI + +G+IT+V ++ V D+ DP + + LD Sbjct: 269 PSAVGYQPTLSTEMGGLQERI--TSTTRGSITSVQAIYVPADDLTDPAPATAFTHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R+++E+G YP VDPL S SR+ + +E + ++ R+++ +DI I G Sbjct: 327 VLSRAISEKGIYPAVDPLDSTSRIMNPQIVGEEHYSTAREVQRILQRYKDLQDIIAILG 385 >gi|121602257|ref|YP_988452.1| F0F1 ATP synthase subunit beta [Bartonella bacilliformis KC583] gi|190358257|sp|A1UR49|ATPB_BARBK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|120614434|gb|ABM45035.1| ATP synthase F1, beta subunit [Bartonella bacilliformis KC583] Length = 537 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 105/332 (31%), Positives = 166/332 (50%), Gaps = 27/332 (8%) Query: 84 GDLVFHWGRFRISP-SACWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQR 140 G VF G P GR++N +G+P+D G K + I K P + + Sbjct: 125 GQKVFDTGTQICVPVGEATLGRIMNVIGEPVDEVGPIVTTK---TRSIHQKAPEYIEQST 181 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVG 196 + TGI+V+D+ P G ++G+F G+G+GK+ L+ + A++ V VG Sbjct: 182 ESEILVTGIKVVDLLAPYSKGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VG 240 Query: 197 ERGRE----VREFIEDYLGDNLK---------KSVVVVATSDESPILRKMAPLTAVTIAE 243 ER RE E IE + N K K +V +E P R L+ +TIAE Sbjct: 241 ERTREGNDLYYEMIESRVNVNPKENDGSTKGSKCALVYGQMNEPPGARARVALSGLTIAE 300 Query: 244 YFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 F +G +VL +D+I RF + E++ G +P A GY ++ +++ L ERI + + Sbjct: 301 NFRDEGQDVLFFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTK 358 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V ++ V D+ DP + + LD VL+RS+AE+G YP VDPL S SR+ D Sbjct: 359 TGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDP 418 Query: 364 AWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +E V+ + ++ R++ +DI I G Sbjct: 419 LVVGEEHYAVACQVQTILQRYKALQDIIAILG 450 >gi|46116940|ref|XP_384488.1| ATPB_NEUCR ATP synthase beta chain, mitochondrial precursor [Gibberella zeae PH-1] Length = 513 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N G PID + K D + I ++ P + + + TGI+V+D+ P Sbjct: 123 ATLGRIMNVTGDPIDERGPI-KTDKRLPIHTEAPEFVEQSTSAEVLVTGIKVVDLLAPYA 181 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 182 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 240 Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 D K +V +E P R LT +T+AEYF ++G +VLL +D+I RF + E Sbjct: 241 QLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDAEGQDVLLFIDNIFRFTQAGSE 300 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + Sbjct: 301 VSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTQKGSITSVQAVYVPADDLTDPAPATT 358 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SR+ D + + + + ++ ++ + Sbjct: 359 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGQEHYDTATRVQQILQEYKSLQ 418 Query: 388 DIRLIGG 394 DI I G Sbjct: 419 DIIAILG 425 >gi|154484982|ref|ZP_02027430.1| hypothetical protein EUBVEN_02700 [Eubacterium ventriosum ATCC 27560] gi|149733935|gb|EDM50054.1| hypothetical protein EUBVEN_02700 [Eubacterium ventriosum ATCC 27560] Length = 468 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 152/293 (51%), Gaps = 9/293 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG +D + L G+ I P ++ V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGDTLDNGEKL-DGEQHWCIHRDPPSFEDQSPVVEVLETGIKVIDLLAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ + I + VGER RE + + E L K+ Sbjct: 145 KIGLFGGAGVGKTVLIQELITNIATQHGGYSIFTGVGERSREGNDLWTEMKESGVLDKTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF + NVLL +D+I RF + E++ G +P Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDEEHQNVLLFIDNIFRFTQAGSEVSALLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI ++ G++T+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLATEMGELQERIASTKN--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R + E+G YP VDPL S SR+ ++ E + + ++ ++ E +DI Sbjct: 323 LSRKIVEQGIYPAVDPLESNSRILEEDVVGKEHYETARRVQEILQKYTELQDI 375 >gi|288574942|ref|ZP_06393299.1| H+transporting two-sector ATPase alpha/beta subunit central region [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570683|gb|EFC92240.1| H+transporting two-sector ATPase alpha/beta subunit central region [Dethiosulfovibrio peptidovorans DSM 11002] Length = 455 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 112/417 (26%), Positives = 196/417 (47%), Gaps = 35/417 (8%) Query: 46 GDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR--FRISPSACWCG 103 G+ V + GQ+++I D+ I +S GD R ++ G Sbjct: 30 GELVTVENGKRTRKGQILQIEGDLCVIQLFDGAMGLSTGDTTVWMDRDVVKVPVGMNLIG 89 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQ 162 +++N G G++ L D +S +P R+R + F +TGI ID+ L GQ Sbjct: 90 KILNGRGLDERGEEILFCEDRIP--VSGLPINPARRRSPRSFIQTGISTIDVMNTLVKGQ 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK-----VIISLVGERGREVREFIEDYLGDN-LKK 216 ++ +FAGSG+ + + + R + V+ + +G RE + FIE + ++K Sbjct: 148 KLPIFAGSGLPANEVTTQIVRQAKVRESSQFLVVFAAMGITKRESQYFIESFKRTGAIEK 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGE 275 V + + +S R + P A+T+AEYF+ KG +VL+++ + + +++REI+ E Sbjct: 208 GVFFLNLASDSAAERLLTPRMALTVAEYFAFQKGYDVLVVMTDMLHYCNALREISAAREE 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P RGYP ++S+L L ER G + G+IT + + + D+ P+ D I +G Sbjct: 268 VPGRRGYPGYMYSDLADLYERAGSIDGSDGSITQIPIITMPDDDMTHPVIDLSGYITEGQ 327 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE-----KKLVSSLTHLIHRFEETRDIR 390 IVL R L ++G +PP+D L S+SRL +K D+ + + L + E +R Sbjct: 328 IVLGRDLHDKGIFPPIDVLPSLSRLMNKGIGKDQTVDYHRAMADQLYSAYAKARELVKLR 387 Query: 391 LIGGYRPGVDLILDKAVHQVPIIY---------DFLKQSPSDLSSEDVFQEITKKLQ 438 LI G D + ++ Y +F+ Q D + ED +E + L+ Sbjct: 388 LIVG---------DDGLTEIEHRYIAFGRSFEENFIDQRGGDRNLEDSLEEAWRALR 435 >gi|4519272|dbj|BAA75551.1| ATP synthase beta-subunit [Volvox aureus] gi|21956000|dbj|BAC06370.1| ATP synthase beta-subunit [Volvox aureus] gi|21956002|dbj|BAC06371.1| ATP synthase beta-subunit [Volvox aureus] Length = 376 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 150 NLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 210 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETR 387 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E + Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKELQ 326 Query: 388 DIRLIGG 394 DI I G Sbjct: 327 DIIAILG 333 >gi|254292529|ref|YP_003058552.1| ATP synthase F1 subunit beta [Hirschia baltica ATCC 49814] gi|254041060|gb|ACT57855.1| ATP synthase F1, beta subunit [Hirschia baltica ATCC 49814] Length = 475 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + + I + P +++ + TGI+VID+ P Sbjct: 85 ATLGRIMNVIGEPIDEAGEIATSE-RRAIHASAPDFVDQNPESEVLATGIKVIDLLCPYA 143 Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVR----EFIEDYL-- 210 G +IG+F G+G+GK+ L+ + + + + VGER RE E IE + Sbjct: 144 KGGKIGLFGGAGVGKTVLIMELINNIAKAYGGYSVFAGVGERTREGNDLYWEMIESKVNE 203 Query: 211 --GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 G ++ +V +E P R LT + AEYF +G +VL +D+I RF + Sbjct: 204 EGGGGDSRATLVYGQMNEPPGARARVALTGLAQAEYFRDEEGKDVLFFVDNIFRFTQAGS 263 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + Sbjct: 264 EVSALLGRIPSAVGYQPTLATDMGGLQERI--TSTHKGSITSVQAIYVPADDLTDPAPAT 321 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD VLNR+++E+G YP VDPL S SR+ +E VS + ++ +++E Sbjct: 322 SFAHLDATTVLNRAISEKGIYPAVDPLDSTSRILSADVVGEEHYQVSRDVQEILQKYKEL 381 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 382 QDIIAILG 389 >gi|87123626|ref|ZP_01079476.1| ATP synthase F1, beta subunit [Synechococcus sp. RS9917] gi|86168195|gb|EAQ69452.1| ATP synthase F1, beta subunit [Synechococcus sp. RS9917] Length = 487 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + I + P + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPV-NATATAPIHREAPKLTELETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKDSGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ER+ + + G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERVASTVE--GSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VLNR+LA +G YP VDPL S S + A DE + ++ + R++E Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|319409367|emb|CBI83011.1| ATP synthase beta chain [Bartonella schoenbuchensis R1] Length = 536 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 165/330 (50%), Gaps = 23/330 (6%) Query: 84 GDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G VF G P GR++N +G+P+D + + I + P + + Sbjct: 124 GQKVFDTGTQICVPVGEATLGRIMNVVGEPVDNAGPI-IATKTRSIHQEAPEYVEQSTES 182 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGER 198 + TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER Sbjct: 183 EILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGER 241 Query: 199 GRE----VREFIEDYLGDNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYF 245 RE E IE + N K K +V +E P R L+ +T+AE F Sbjct: 242 TREGNDLYYEMIESRVNVNPKDNKGSAAGSKCALVYGQMNEPPGARARVALSGLTVAESF 301 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D++ RF + E++ G +P A GY ++ +E+ L ERI + + G Sbjct: 302 RDEGQDVLFFVDNMFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKTG 359 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V ++ V D+ DP + + LD VL+R++AE+G YP VDPL S SR+ D Sbjct: 360 SITSVQAIYVPADDLTDPAPATSFAHLDATTVLSRAIAEKGIYPAVDPLDSSSRMLDPMV 419 Query: 366 SADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +E V+ + ++ R++ +DI I G Sbjct: 420 VGEEHYAVACQVQTILQRYKSLQDIIAILG 449 >gi|187778787|ref|ZP_02995260.1| hypothetical protein CLOSPO_02382 [Clostridium sporogenes ATCC 15579] gi|187772412|gb|EDU36214.1| hypothetical protein CLOSPO_02382 [Clostridium sporogenes ATCC 15579] Length = 461 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 101/328 (30%), Positives = 166/328 (50%), Gaps = 19/328 (5%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G+ G+V+ IN D +V + G I + F + S GRV + Sbjct: 34 LHNGEK--RRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFD 91 Query: 108 ALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 LG P DG + K D+S ++ V R ++ +TG+ ID L GQ++ Sbjct: 92 GLGNPKDGGPKIIPDEKRDISGIPINPVA----RNYPDEFIQTGVSAIDGLNTLVRGQKL 147 Query: 165 GVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 VF+GSG+ + L + AR SD V+ + +G E + FI+D+ + ++ Sbjct: 148 PVFSGSGLPHAELAAQIARQAKVLNSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRA 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGEL 276 V+ + +++ I R P A+T AEY + KG +VL+I+ IT + ++RE++ E+ Sbjct: 208 VLFINLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEV 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P RGYP ++++L L ER G +G+IT + + + D+ PI D I +G I Sbjct: 268 PGRRGYPGYLYTDLSTLYERAGRILGREGSITQIPILTMPEDDKTHPIPDLTGYITEGQI 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKA 364 +L+R L ++G PP+D L S+SRL DK Sbjct: 328 ILSRELYKKGIMPPIDVLPSLSRLKDKG 355 >gi|46906331|ref|YP_012720.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes serotype 4b str. F2365] gi|47092227|ref|ZP_00230019.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 4b H7858] gi|226222730|ref|YP_002756837.1| ATP synthase beta chain [Listeria monocytogenes Clip81459] gi|254826285|ref|ZP_05231286.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL J1-194] gi|254851740|ref|ZP_05241088.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL R2-503] gi|254933110|ref|ZP_05266469.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes HPB2262] gi|254991771|ref|ZP_05273961.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-064] gi|255519884|ref|ZP_05387121.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J1-175] gi|300766019|ref|ZP_07075989.1| ATP synthase F1 [Listeria monocytogenes FSL N1-017] gi|81565984|sp|Q724W4|ATPB1_LISMF RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|46879595|gb|AAT02897.1| ATP synthase F1, beta subunit [Listeria monocytogenes serotype 4b str. F2365] gi|47019429|gb|EAL10170.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 4b H7858] gi|225875192|emb|CAS03886.1| Putative ATP synthase beta chain [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605032|gb|EEW17640.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL R2-503] gi|293584668|gb|EFF96700.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes HPB2262] gi|293595524|gb|EFG03285.1| ATP synthase F1 sector subunit beta [Listeria monocytogenes FSL J1-194] gi|300513277|gb|EFK40354.1| ATP synthase F1 [Listeria monocytogenes FSL N1-017] gi|328468429|gb|EGF39435.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 1816] gi|332310505|gb|EGJ23600.1| ATP synthase subunit beta [Listeria monocytogenes str. Scott A] Length = 456 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 30/404 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN + + IGE L G V + G + G Sbjct: 33 EYHTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG ++ I P ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGKPEPA-AEVKWPIFRDQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215 G+F G+G+GKS L+ SM + F + VGER RE + + E L Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNSVF-----TGVGERVREGIGLYKELEASGVLP 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ++P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 IVL RS+A G +P V+PL S SR + + + +L + + ++ R+ E ++I + Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAAQVKFILQRYMELQEIINVL 380 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433 G D K VH+ I +FL Q S +E F EI Sbjct: 381 GMAELSDED-RKLVHRARKIRNFLSQPFYVSEKFTGTEGTFVEI 423 >gi|284047571|ref|YP_003397910.1| H(+)-transporting two-sector ATPase [Acidaminococcus fermentans DSM 20731] gi|283951792|gb|ADB46595.1| H(+)-transporting two-sector ATPase [Acidaminococcus fermentans DSM 20731] Length = 463 Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 98/328 (29%), Positives = 169/328 (51%), Gaps = 17/328 (5%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +HQ G+V+ ++ D +V + G + + F ++ S GRV + Sbjct: 32 IHQANGELRKGKVLTVDGDKALVQLFEDSQGLQPATAKARFLGHGIQLGVSPAMLGRVFD 91 Query: 108 ALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 +G PIDG ++ D++ E M+ PA R+ + +TG+ ID L GQ++ Sbjct: 92 GMGSPIDGGPAIIPEEYKDINGEPMN---PAA-REYPSEFIQTGVSAIDGLNTLVRGQKL 147 Query: 165 GVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKS 217 VF+GSG+ + L + AR +D V+ + VG E F++D+ L ++ Sbjct: 148 PVFSGSGLPHAQLAAQIARQARVRGTDEKFAVVFAAVGITFEEANFFMQDFNRTGALSRA 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGEL 276 V+ + +++ + R P A+T AEY + + D +VL+I+ IT +A ++RE++ E+ Sbjct: 208 VMFINLANDPAVERIATPRMAITAAEYLAFELDMHVLVIITDITNYADALREVSAARKEV 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P RGYP ++++L + ER G +KG+IT + + + D+ PI D I +G I Sbjct: 268 PGRRGYPGYLYTDLATMYERAGRIRGKKGSITMIPILSMPEDDKTHPIPDLTGYITEGQI 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKA 364 +L+R L +G PP+D L S+SRL DK Sbjct: 328 ILSRELYRKGLTPPIDVLPSLSRLKDKG 355 >gi|294789023|ref|ZP_06754263.1| ATP synthase F1, beta subunit [Simonsiella muelleri ATCC 29453] gi|294483125|gb|EFG30812.1| ATP synthase F1, beta subunit [Simonsiella muelleri ATCC 29453] Length = 465 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 156/307 (50%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG P+D +G + + I P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPVDEAGPIGSNE-TRAIHQPAPKFDELSSATELLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVL 198 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +++AE+F + KG +VL +D+I R+ + E Sbjct: 199 DKVAMVYGQMNEPPGNRLRVALTGLSMAEHFRDEKDENGKGRDVLFFVDNIYRYTLAGTE 258 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 259 VSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATT 316 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD +VL+R +A G YP VDPL S SR D E V+ + + +++E R Sbjct: 317 FAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELR 376 Query: 388 DIRLIGG 394 DI I G Sbjct: 377 DIIAILG 383 >gi|213026879|ref|ZP_03341326.1| type III secretion system ATPase [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 174 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 77/168 (45%), Positives = 107/168 (63%), Gaps = 2/168 (1%) Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + REIA +GE V+ YP VFS LPRLLER G EK G+ITA +VLV+GD+ N+P+ Sbjct: 1 AAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEK--GSITAFYTVLVEGDDMNEPL 58 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFE 384 AD VRS+LDGHIVL+R LAE G YP +D LA++SR+ S + ++L + L + ++ Sbjct: 59 ADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRRLALYQ 118 Query: 385 ETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432 E + IG Y+ GVD DKA+ P I FL+QS ++ ++ E Sbjct: 119 EVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGPELLIE 166 >gi|46909233|gb|AAT06134.1| ATP synthase beta subunit [Patiria miniata] Length = 427 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 17/315 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR+IN +G+ ID + D I + P + ++ TGI+V+ Sbjct: 55 IRIPVGPETLGRIINVIGESIDERGPI-PTDRRAAIHQEAPEFVEMNVAQEILVTGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VRE 204 D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE E Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHE 172 Query: 205 FIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 IE L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 173 MIEGGVISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIF 232 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ + E I + +KG+IT+V ++ V D+ Sbjct: 233 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQEII--TTTKKGSITSVQAIYVPADDL 290 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+R +AE G YP VDPL S SR+ D DE V+ + + Sbjct: 291 TDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNVVGDEHYSVARGVQKI 350 Query: 380 IHRFEETRDIRLIGG 394 + + +DI I G Sbjct: 351 LQDYRSLQDIIAILG 365 >gi|269986888|gb|EEZ93164.1| H+transporting two-sector ATPase alpha/beta subunit central region [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 460 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 160/316 (50%), Gaps = 13/316 (4%) Query: 60 GQVIRINLDIVYICPVG--IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ N D+ I G G + F F++ S GRV + LG+P DG Sbjct: 43 GQVLATNEDVTIIQVFGETTGMNTKGTKVKFKGTTFKMPVSMDMVGRVFDGLGRPRDGGI 102 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + D M+I R+ + +TGI ID L GQ++ +F+GSG+ + L Sbjct: 103 PIF-SDEKMDINGNPINPYAREEPSEFVQTGISSIDCMNTLVRGQKLPIFSGSGLSHNKL 161 Query: 178 LS-------MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + + A F V+ +G + FI ++ L+KSV+ + + + + Sbjct: 162 AAQIVKQAKILAEKQNF-YVVFGGIGINSEDANFFINEFQNSGALEKSVIFLNLAADPSM 220 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R + P A+T AEY + KG +V++IL +T +A ++REI+ E+P RGYP +++ Sbjct: 221 ERVILPRLALTTAEYLAYEKGSHVIVILTDMTNYAEALREISAARDEVPGRRGYPGYMYT 280 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L L ER G + ++G++T + + + D+ PI D I +G IVL+R+L + G Y Sbjct: 281 DLASLFERAGKVKGKEGSVTQLPILTMPSDDITHPIPDLTGYITEGQIVLSRALDKSGIY 340 Query: 349 PPVDPLASVSRLADKA 364 P VD L S+SRL ++ Sbjct: 341 PEVDVLLSLSRLMNQG 356 >gi|296137183|ref|YP_003644425.1| ATP synthase F1, beta subunit [Thiomonas intermedia K12] gi|295797305|gb|ADG32095.1| ATP synthase F1, beta subunit [Thiomonas intermedia K12] Length = 471 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 102/333 (30%), Positives = 166/333 (49%), Gaps = 11/333 (3%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G LV + G ++ GR+++ LG+PID + D Sbjct: 61 VVRTIAMGSSDGLRRGMLVNNTGHSIQVPVGPAVLGRIMDVLGRPIDEAGPIAT-DERRS 119 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I P + +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 120 IHQSAPKFDDLSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 179 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242 V VGER RE +F + N L K +V +E P R LT +T+A Sbjct: 180 QHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMA 238 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E F +G ++L +D+I R+ + E++ G +P A GY ++ E+ +L ERI + Sbjct: 239 ERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGKLQERI--TST 296 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 297 KTGSITSIQAVYVPADDLTDPSPATTFNHLDATVVLSRDIASLGIYPAVDPLDSTSRQID 356 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E ++ ++ R++E RDI I G Sbjct: 357 PNVIGEEHYSTTRAVQGILQRYKELRDIIAILG 389 >gi|213401040|gb|ACJ47168.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Armadillidium vulgare] Length = 309 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 20/288 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ ID L KG +E + + PP+ Q++ E+ TGI+VID P G Sbjct: 18 GRIFNVVGELIDECGPL-KGKYDLEPIHRSPPSFTEQKIQEEVLVTGIKVIDFLAPYLKG 76 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ F + + VGER RE + + + N+ Sbjct: 77 GKIGLFGGAGVGKTVLIMELINNIAKAHKGFS--VFAGVGERTREGNDLYNEMITSNVID 134 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIR 267 ++V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 135 INEHEKSQAVLVYGQMNEPPGARARVALTALTMAEYFRDRENQDVLFFVDNIFRFTQAGS 194 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ + ERI + G+IT++ ++ V D+ DP + Sbjct: 195 ELSALLGRIPSAVGYQPTLATDMGAMQERI--ASTTAGSITSIQAIYVPADDLTDPAPAT 252 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 S LD VL+R +AE G YP VDPL S S+ +E V+S Sbjct: 253 TFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSAEIIGEEHYNVAS 300 >gi|16799215|ref|NP_469483.1| F0F1 ATP synthase subunit beta [Listeria innocua Clip11262] gi|81595494|sp|Q92FG8|ATPB1_LISIN RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|16412557|emb|CAC95371.1| lin0138 [Listeria innocua Clip11262] Length = 456 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 120/404 (29%), Positives = 196/404 (48%), Gaps = 30/404 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN + + IGE L G V + G + G Sbjct: 33 EYKTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGAEVINLGHPIEVPVGETVQG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG + ++ I + P ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGLPE-PEAEVKWPIFREQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215 G+F G+G+GKS L+ SM + F V GER RE + + E L Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMMGGNSVFTGV-----GERVREGIGLYNELESSGVLP 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ++P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 IVL RS+A G +P V+PL S SR + + + +L + ++ R+ E ++I + Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433 G D K VH+ I +FL Q S +E +F EI Sbjct: 381 GMAELSDED-KKLVHRARKIRNFLSQPFYVSEKFTGTEGIFVEI 423 >gi|164424839|ref|XP_963253.2| ATP synthase beta chain, mitochondrial precursor [Neurospora crassa OR74A] gi|114555|sp|P23704|ATPB_NEUCR RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|14126|emb|CAA37756.1| unnamed protein product [Neurospora crassa] gi|168763|gb|AAA33562.1| mitochondrial ATPase beta-subunit [Neurospora crassa] gi|7801084|emb|CAB91479.1| H+-transporting ATP synthase (EC 3.6.1.34) beta chain [Neurospora crassa] gi|157070684|gb|EAA34017.2| ATP synthase beta chain, mitochondrial precursor [Neurospora crassa OR74A] Length = 519 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 155/307 (50%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN G PID + K D I ++ P + + + TGI+V+D+ P Sbjct: 128 ATLGRIINVTGDPIDERGPI-KTDKFRPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYA 186 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 187 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 245 Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 246 QLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 305 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++ ++ ERI + KG+IT+V +V V D+ DP + Sbjct: 306 VSALLGRIPSAVGYQPTLAVDMGQMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATT 363 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SR+ D E + + + ++ ++ + Sbjct: 364 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYETATRVQQILQEYKSLQ 423 Query: 388 DIRLIGG 394 DI I G Sbjct: 424 DIIAILG 430 >gi|302670524|ref|YP_003830484.1| ATP synthase F1 beta subunit AtpD2 [Butyrivibrio proteoclasticus B316] gi|302394997|gb|ADL33902.1| ATP synthase F1 beta subunit AtpD2 [Butyrivibrio proteoclasticus B316] Length = 463 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 156/298 (52%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG ID + K + +I + P +++ V + +TGI+VID+ P G Sbjct: 86 GRLFNVLGDAIDNKGEV-KCEEKWQIHREPPKLVDQSPVVEVLETGIKVIDLLAPYAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ ++ + I + VGER RE + + + K+ Sbjct: 145 KIGLFGGAGVGKTVLIQELIQNIATEHGGYSIFTGVGERSREGNDLWSEMTESGVINKTA 204 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R T +T+AEYF K +VLL +D+I RF + E+++ G +P Sbjct: 205 LVFGQMNEPPGARMRVAETGLTMAEYFRDVKHQDVLLFIDNIFRFVQAGSEVSSLLGRMP 264 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ ++L L ERI + G++T+V +V V D+ DP + + LD V Sbjct: 265 SAVGYQPTLSTDLGALQERIASTRL--GSVTSVQAVYVPADDLTDPAPATTFAHLDATTV 322 Query: 338 LNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R + E+G YP VDPL S SR L + + + ++ +++E +DI I G Sbjct: 323 LSRKIVEQGIYPAVDPLESSSRILEEDVVGKVHYETAMKVQEILQKYKELQDIIAILG 380 >gi|295111324|emb|CBL28074.1| Archaeal/vacuolar-type H+-ATPase subunit B [Synergistetes bacterium SGP1] Length = 469 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/323 (30%), Positives = 167/323 (51%), Gaps = 17/323 (5%) Query: 87 VFHWGRFRISP-SACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKG 144 V G+ + P S GRV N G+PIDG L + L + M P +R + Sbjct: 71 VRFLGKVQTLPVSRDMLGRVFNGRGEPIDGGAPLIAEQTLDINGMPMNP--YSRDFPSEF 128 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK------VIISLVGER 198 +TGI ID P+ GQ++ +F+ SG+ + + + AR V+ + +G Sbjct: 129 IQTGISTIDGLNPMVRGQKLPIFSASGLPHNRMAAQIARQATVISGHEDFAVVFAAMGIT 188 Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256 E F+ED+ L+++V+ + +D+ I R P A+T AEY + + G +V++IL Sbjct: 189 FEEASFFMEDFRKTGALERTVLYINLADDPAIERISTPRIALTAAEYLAFECGMHVVVIL 248 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 +T + ++REI+ E+P RGYP ++++L + ER G + + G+IT + + + Sbjct: 249 TDLTNYCEALREISAARKEVPGRRGYPGYLYTDLATMYERAGRLKGKVGSITQIPILTMP 308 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK----- 371 D+ PI D I +G I+L+RSL +G YPPVD + S+SRL DK D+ + Sbjct: 309 EDDKTHPIPDLTGYITEGQIILSRSLHRQGIYPPVDVMPSLSRLKDKGIGKDKTREDHAD 368 Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394 L++ L R ++ +++ +I G Sbjct: 369 LMNQLFAAYSRGKDAKELAVILG 391 >gi|227497331|ref|ZP_03927563.1| F0F1 ATP synthase subunit beta [Actinomyces urogenitalis DSM 15434] gi|226833202|gb|EEH65585.1| F0F1 ATP synthase subunit beta [Actinomyces urogenitalis DSM 15434] Length = 485 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 92/273 (33%), Positives = 152/273 (55%), Gaps = 9/273 (3%) Query: 129 MSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 + + PPA ++ + E+ F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 131 IHRQPPAFDQLEAKEQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 190 Query: 188 DKVIISL---VGERGREVREFI-EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + +S+ VGER RE + I E K+ +V DE P R L+A+T+AE Sbjct: 191 NHGGVSVFAGVGERTREGNDLIVEMDEAGVFDKTALVFGQMDEPPGTRLRVALSALTMAE 250 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ +L ERI + Sbjct: 251 YFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSA 308 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A G YP VDPLAS SRL Sbjct: 309 GGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASRGIYPAVDPLASSSRLLA 368 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + +E ++ + + ++ + +E +DI I G Sbjct: 369 PQFVGEEHYEVATRVKSILQKNKELQDIIAILG 401 >gi|4995844|emb|CAB44277.1| H(+)-transporting ATP synthase [Sarcolaena sp. Chase 903] Length = 479 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 111/360 (30%), Positives = 173/360 (48%), Gaps = 29/360 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + + G V + G + GR Sbjct: 39 KGQDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVINTGTPLSVPVGGVTLGR 98 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID LG D + I P + + F+TGI+V+D+ P G Sbjct: 99 IFNVLGEPID---ELGPVDTXTTSPIHKPAPAFIQLETKLSIFETGIKVVDLLAPYRRGG 155 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DN 213 +IG+F G+G+GK+ L+ + +S+ VGER RE + + N Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVINEQN 215 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 216 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 275 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 276 ALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 333 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S L + A+ + + + R++E +DI Sbjct: 334 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQXRIVGAEHYETAQRVKQTLQRYKELQDI 393 >gi|142564|gb|AAA22253.1| ATP synthase beta subunit (atpD) (EC 3.6.1.3) [Bacillus firmus] Length = 467 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/330 (30%), Positives = 170/330 (51%), Gaps = 16/330 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV N LG+ ID + + D I + P + +TGI+V+D+ P Sbjct: 88 ATLGRVFNVLGEAIDLGEPVAADDKRDPIHREAPKFEELSTTTEILETGIKVVDLLAPYI 147 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G +IG+F G+G+GK+ L+ + + +IS+ VGER RE + + +K Sbjct: 148 IGGKIGLFGGAGVGKTVLIQELINNIAQEHGVISVFAGVGERTREGNDLYHEMTDSGVIK 207 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 KS +V +E P R L+ +T+AE+F + G +VLL + +I+ F + E++ G Sbjct: 208 KSAMVFGQMNEPPGARMAVALSGLTMAEHFRDRDGQDVLLFVVNIS-FTQAGSEVSALLG 266 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ +E+ +L ERI + + G++T++ ++ V D++ DP + + LD Sbjct: 267 RMPSAVGYQPTLATEMGQLQERI--TSTKVGSVTSIQAIYVPADDYTDPAPATTFAHLDA 324 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 L R L+E G YP VDPLAS SR L+ + + + + + +++E +DI I Sbjct: 325 TTNLERKLSEMGIYPAVDPLASTSRALSPEIVGEEHYSVARQVQQTLQKYKELQDIIAI- 383 Query: 394 GYRPGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ I FL Q+ Sbjct: 384 ---LGMDELSEEDKLVVHRARRIQFFLSQN 410 >gi|256387195|gb|ACU80598.1| ATP synthase beta subunit [Crinoidea sp. MR-2009] Length = 334 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/285 (34%), Positives = 151/285 (52%), Gaps = 26/285 (9%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+IN +G+PID +G + E I ++ P + ++ +TGI+V+D+ P Sbjct: 20 LGRIINVIGEPIDE-----RGPIPTERRAAIHAEAPEFVEMSVRQEILETGIKVVDLLAP 74 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE-- 207 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 75 YAKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIEGG 133 Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 D GD K +V +E P R LT +T+AEYF +G +VLL +D+I RF Sbjct: 134 VIDLKGDK-SKVALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQ 192 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP Sbjct: 193 AGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTTKGSITSVQAIYVPADDLTDPA 250 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + + LD VL+R +AE G YP VDPL S SR+ D +E Sbjct: 251 PATTFAHLDATTVLSRGIAELGIYPAVDPLDSSSRIMDPFIVGEE 295 >gi|255720819|ref|XP_002545344.1| ATP synthase beta chain, mitochondrial precursor [Candida tropicalis MYA-3404] gi|240135833|gb|EER35386.1| ATP synthase beta chain, mitochondrial precursor [Candida tropicalis MYA-3404] Length = 415 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 20/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID D + I ++ P + + + +TGI+V+D+ P G Sbjct: 29 LGRIINVVGEPID-DRGPIECKERKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARG 87 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 88 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINL 146 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 147 EGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 204 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 205 VSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATT 262 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SRL D E + + + + ++ + Sbjct: 263 FAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDATVVGQEHYDVATGVQQTLQAYKSLQ 322 Query: 388 DIRLIGG 394 DI I G Sbjct: 323 DIIAILG 329 >gi|91226238|ref|ZP_01261078.1| F0F1 ATP synthase subunit beta [Vibrio alginolyticus 12G01] gi|91189249|gb|EAS75528.1| F0F1 ATP synthase subunit beta [Vibrio alginolyticus 12G01] Length = 467 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 155/305 (50%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 GR++N LG ID +G ++ + + P+ Q E +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGEVGAEEVYS--IHRSAPSYEEQSNEIALLETGVKVIDLICPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVE 203 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 204 KPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFA 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389 LD +VLNR++A G YP +DPL S SR+ D D ++ + + R++E +DI Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQDHYEVARGVQQTLQRYKELKDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|23503607|dbj|BAC20400.1| ATP synthase beta-subunit [Chloromonas palmelloides] gi|23503611|dbj|BAC20402.1| ATP synthase beta-subunit [Chloromonas rosae] Length = 376 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAETALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|159904098|ref|YP_001551442.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT 9211] gi|226740660|sp|A9BCC6|ATPB_PROM4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|159889274|gb|ABX09488.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT 9211] Length = 488 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + K + I P + + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPI-KSSTTSPIHRSAPKLTDLETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DNL +S V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADNLTESKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + A DE + ++ + R++E Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|170294001|gb|ACB13094.1| ATP synthase beta subunit [Caulerpa brownii] Length = 367 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 158/306 (51%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + I + P ++ + F+TGI+V+D+ P G Sbjct: 21 LGRIFNVLGEPVDNLGDVASESPRSSIHREAPAFVDLETTLSIFETGIKVVDLLAPYRRG 80 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLK 215 +IG+F G+G+GK+ L+ + +S+ VGER RE +F +++ N++ Sbjct: 81 GKIGLFGGAGVGKTVLIVELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNIE 140 Query: 216 KS-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 141 KPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 200 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ SE+ L ERI + + G+IT++ ++ V D+ DP + Sbjct: 201 ALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAIYVPADDLTDPAPAITFA 258 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388 LD VL+R LA +G YP VDPL S S + + W E+ ++ + R++E +D Sbjct: 259 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEQHYNCAQNVQQTLQRYKELQD 317 Query: 389 IRLIGG 394 I I G Sbjct: 318 IIAILG 323 >gi|159039540|ref|YP_001538793.1| F0F1 ATP synthase subunit beta [Salinispora arenicola CNS-205] gi|190358703|sp|A8M2J3|ATPB_SALAI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157918375|gb|ABV99802.1| ATP synthase F1, beta subunit [Salinispora arenicola CNS-205] Length = 485 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 103 GRVINALGK--PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G V NA+G+ ++ ++L D +I K P + + + +TGI+VID+ P Sbjct: 104 GHVFNAIGECLNLEPGETLSPDD-HWQIHRKAPAFADLEPKTEMLETGIKVIDLLAPYVK 162 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + + K Sbjct: 163 GGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLIAEMTESGVIDK 222 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF + VLL +D+I RF + E++T G Sbjct: 223 TALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNIFRFTQAGSEVSTLLGR 282 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + IT++ ++ V D++ DP + + LD Sbjct: 283 MPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADDYTDPAPATTFAHLDAT 340 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L RS++++G YP VDPLAS SR+ + E +V+S + ++ R+++ +DI I G Sbjct: 341 TNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFVVASEVKRILQRYKDLQDIIAILG 400 >gi|91178120|gb|ABE27295.1| mitochondrial F-ATPase beta subunit [Pichia kudriavzevii] Length = 337 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/310 (33%), Positives = 164/310 (52%), Gaps = 26/310 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR++N +G P+D +G + + + PPA Q E + +TGI+V+D+ P Sbjct: 19 LGRILNVIGDPVDE-----RGPVDCKERKPIHADPPAFVEQSTEAEVLETGIKVVDLLAP 73 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E Sbjct: 74 YARGGKIGLFGGAGVGKTVFIQELINNVAKAHGGFSVFTG-VGERTREGNDLYREMKETG 132 Query: 210 LGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + NL+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 133 V-INLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQA 191 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP Sbjct: 192 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAP 249 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SRL D A E ++ + + + ++ Sbjct: 250 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVAVVGQEHYEVATQVQETLQAYK 309 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 310 SLQDIIAILG 319 >gi|73543028|ref|YP_297548.1| F0F1 ATP synthase subunit beta [Ralstonia eutropha JMP134] gi|118573728|sp|Q46VY0|ATPB_RALEJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|72120441|gb|AAZ62704.1| ATP synthase F1, beta subunit [Ralstonia eutropha JMP134] Length = 467 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 152/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I K P +TGI+VID+ P G Sbjct: 92 GRIMDVLGRPIDEAGPIAS-DERRAIHQKAPKFDELSPSTDLLETGIKVIDLICPFAKGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L+ +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 210 AMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTLV 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E V+ ++ + R++E RDI I G Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQMDPQVVGQEHYNVARAVQQTLQRYKELRDIIAILG 385 >gi|23503627|dbj|BAC20410.1| ATP synthase beta-subunit [Pseudocarteria mucosa] Length = 376 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 162/311 (52%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + ++ I + P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NLGPVETEETLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLSDS--KVSLVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 S LD VL+R+LA +G YP VDPL S S + + W EK + S+ + R+ Sbjct: 264 AVTFSHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYECAQSVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|254229975|ref|ZP_04923376.1| ATP synthase F1, beta subunit [Vibrio sp. Ex25] gi|262392804|ref|YP_003284658.1| ATP synthase subunit beta [Vibrio sp. Ex25] gi|269965297|ref|ZP_06179418.1| ATP synthase subunit B [Vibrio alginolyticus 40B] gi|114573|sp|P12986|ATPB_VIBAL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|48339|emb|CAA34181.1| unnamed protein product [Vibrio alginolyticus] gi|151937477|gb|EDN56334.1| ATP synthase F1, beta subunit [Vibrio sp. Ex25] gi|262336398|gb|ACY50193.1| ATP synthase beta chain [Vibrio sp. Ex25] gi|269830098|gb|EEZ84326.1| ATP synthase subunit B [Vibrio alginolyticus 40B] Length = 467 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 155/305 (50%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 GR++N LG ID +G ++ + + P+ Q E +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGEVGAEEVYS--IHRSAPSYEEQSNEIALLETGVKVIDLICPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVE 203 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 204 KPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFA 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389 LD +VLNR++A G YP +DPL S SR+ D D ++ + + R++E +DI Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQDHYEVARGVQQTLQRYKELKDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|118464478|ref|YP_880766.1| F0F1 ATP synthase subunit beta [Mycobacterium avium 104] gi|166201717|sp|A0QCX8|ATPB_MYCA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118165765|gb|ABK66662.1| ATP synthase F1, beta subunit [Mycobacterium avium 104] Length = 485 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D G+ I K PP + + +TG++V+D+ TP G Sbjct: 106 GHVFNALGHCLD-KPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRGG 164 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK + Sbjct: 165 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTA 224 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AE+F + G +VLL +D+I RF + E++T G +P Sbjct: 225 LVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 284 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 285 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 342 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ +G +P VDPLAS S + D +E ++ + ++ R+++ +DI I G Sbjct: 343 LSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILG 400 >gi|152965238|ref|YP_001361022.1| F0F1 ATP synthase subunit beta [Kineococcus radiotolerans SRS30216] gi|190358673|sp|A6W7G9|ATPB_KINRD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|151359755|gb|ABS02758.1| ATP synthase F1, beta subunit [Kineococcus radiotolerans SRS30216] Length = 486 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 19/307 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP---PAMNRQRVEKG---FKTGIRVID 153 G V NA+G+ ++ L +G+ +E+ + P A N ++E F+TGI+VID Sbjct: 101 ATLGHVFNAIGECLN----LEEGE-QLEVHERWPIHRKAPNFDQLESRTTMFETGIKVID 155 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDY 209 + TP G +IG+F G+G+GK+ L+ + + +S+ VGER RE + I E Sbjct: 156 LLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMA 215 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 K+ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E Sbjct: 216 EAGVFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSE 275 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++T G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + Sbjct: 276 VSTLLGRMPSAVGYQPTLADEMGVLQERITSTRGH--SITSLQAIYVPADDYTDPAPATT 333 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETR 387 + LD L+R +A G YP VDPL S SR+ D + A D + ++ R +E + Sbjct: 334 FAHLDATTELSREIASRGLYPAVDPLTSTSRILDPLYIAQDHYDTAVRVKQILQRNKELQ 393 Query: 388 DIRLIGG 394 DI I G Sbjct: 394 DIIAILG 400 >gi|288959333|ref|YP_003449674.1| F-type H+-transporting ATPase beta chain [Azospirillum sp. B510] gi|288911641|dbj|BAI73130.1| F-type H+-transporting ATPase beta chain [Azospirillum sp. B510] Length = 473 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID ++ S+ I + P +++ + TGI+VID+ P G Sbjct: 88 LGRIINVIGEPIDERGAVNAAR-SLPIHRQAPDFVDQSTDAEVLITGIKVIDLLAPYAKG 146 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L++ A++ V VGER RE + + + + Sbjct: 147 GKIGLFGGAGVGKTVTIMELINNVAKAHGGVSVFAG-VGERTREGNDLYHEMIESGVIKL 205 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 K +V +E P R L+ +T+AEYF +G +VL +D+I RF + E+ Sbjct: 206 DGPGSKVALVYGQMNEPPGARARVALSGLTLAEYFRDEEGQDVLFFVDNIFRFTQAGSEV 265 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 266 SALLGRIPSAVGYQPTLGTDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPAASF 323 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE +P VDPL S SR+ D DE V+ S+ ++ ++ +D Sbjct: 324 AHLDATTVLSRSIAEMAIFPAVDPLDSTSRILDPRVVGDEHYSVARSVQKVLQTYKSLQD 383 Query: 389 IRLIGG 394 I I G Sbjct: 384 IIAILG 389 >gi|170293969|gb|ACB13078.1| ATP synthase beta subunit [Oedogonium cardiacum] Length = 366 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 20/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + + + I P + F++GI+V+D+ P G Sbjct: 22 GRIFNVLGEPVDNMGPV-QTEEKLPIHRPAPAFTDLDTRLSIFESGIKVVDLLAPYRRGG 80 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +ED Sbjct: 81 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIVEDN 140 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 141 LGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 198 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 199 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 256 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 S LD VL+R LA +G YP VDPLAS S + D + + R++E + Sbjct: 257 FSHLDATTVLSRGLAAKGIYPAVDPLASTSTMLQPWIVGDAHYNCAQKVKETLQRYKELQ 316 Query: 388 DIRLIGG 394 DI I G Sbjct: 317 DIIAILG 323 >gi|319785938|ref|YP_004145413.1| ATP synthase F1 subunit beta [Pseudoxanthomonas suwonensis 11-1] gi|317464450|gb|ADV26182.1| ATP synthase F1, beta subunit [Pseudoxanthomonas suwonensis 11-1] Length = 465 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 156/308 (50%), Gaps = 16/308 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+++ LG ID + D EI P ++ + +TGI+VID+ P Sbjct: 80 AGTLGRIMDVLGNAIDEAGPVQASD-HWEIHRAAPSYEDQSSATELLETGIKVIDLMCPF 138 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + N Sbjct: 139 AKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNV 197 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIR 267 L K +V +E P R LT +T+AEYF S KG +VLL +D+I R+ + Sbjct: 198 LDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDESGKGKDVLLFVDNIYRYTLAGT 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSIQAVYVPADDLTDPSPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD +VL+R++A G YP VDPL S SR D E + + +++E Sbjct: 316 TFAHLDATVVLSRNIAALGIYPAVDPLDSTSRQLDPNVIGHEHYDTARRVQATLQKYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 KDIIAILG 383 >gi|88802039|ref|ZP_01117567.1| ATP synthase subunit B [Polaribacter irgensii 23-P] gi|88782697|gb|EAR13874.1| ATP synthase subunit B [Polaribacter irgensii 23-P] Length = 503 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 162/330 (49%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G IDG +L K G + I P + + TGI+VID+ P G Sbjct: 91 GRLFNVTGDAIDGLGNLKKEGKDGVSIHRSAPKFEDLSVSTEVLFTGIKVIDLIEPYAKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 211 DDFMHSMEEGGWDLSKVDKPGMRESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 270 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 S+G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 271 ESQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 328 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ A Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILSAAI 388 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E +++ ++ R++E +DI I G Sbjct: 389 LGEEHYNTATAVKEILQRYKELQDIIAILG 418 >gi|254774349|ref|ZP_05215865.1| F0F1 ATP synthase subunit beta [Mycobacterium avium subsp. avium ATCC 25291] Length = 485 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D G+ I K PP + + +TG++V+D+ TP G Sbjct: 106 GHVFNALGHCLD-KPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRGG 164 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK + Sbjct: 165 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTA 224 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AE+F + G +VLL +D+I RF + E++T G +P Sbjct: 225 LVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 284 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 285 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 342 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ +G +P VDPLAS S + D +E ++ + ++ R+++ +DI I G Sbjct: 343 LSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILG 400 >gi|171690264|ref|XP_001910057.1| hypothetical protein [Podospora anserina S mat+] gi|170945080|emb|CAP71191.1| unnamed protein product [Podospora anserina S mat+] Length = 565 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N G PID + K D + I ++ P + + + TGI+V+D+ P Sbjct: 174 ATLGRIMNVTGDPIDERGPI-KTDKRLPIHAEAPEFIEQSTTAEILVTGIKVVDLLAPYA 232 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 233 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 291 Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 292 QLDGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSE 351 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + Sbjct: 352 VSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATT 409 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SR+ D +E + + + ++ ++ + Sbjct: 410 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYQTATRVQQILQEYKSLQ 469 Query: 388 DIRLIGG 394 DI I G Sbjct: 470 DIIAILG 476 >gi|168180954|ref|ZP_02615618.1| V-type ATPase, B subunit [Clostridium botulinum NCTC 2916] gi|182668348|gb|EDT80327.1| V-type ATPase, B subunit [Clostridium botulinum NCTC 2916] Length = 461 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 167/332 (50%), Gaps = 13/332 (3%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G+ G+V+ IN D +V + G I + F + S GRV + Sbjct: 34 LHNGEK--RRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFD 91 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P DG + D +I + R ++ +TG+ ID L GQ++ VF Sbjct: 92 GLGNPKDGGPKI-IADEKRDISGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVF 150 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ + L + AR SD V+ + +G E + FI+D+ + ++V+ Sbjct: 151 SGSGLPHAELAAQIARQAKVLKSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRAVLF 210 Query: 221 VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + KG +VL+I+ IT + ++RE++ E+P Sbjct: 211 INLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEVPGR 270 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP ++++L + ER G ++G+IT + + + D+ PI D I +G I+L+ Sbjct: 271 RGYPGYLYTDLSTIYERAGRILGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILS 330 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 R L ++G PP+D L S+SRL DK ++ + Sbjct: 331 RELYKKGIMPPIDVLPSLSRLKDKGIGKEKTR 362 >gi|332992898|gb|AEF02953.1| F0F1 ATP synthase subunit beta [Alteromonas sp. SN2] Length = 480 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 160/309 (51%), Gaps = 15/309 (4%) Query: 90 WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 G ++ R+ N G+ IDG + + + PP ++ + F+TGI Sbjct: 81 QGPLKVPVGPSILTRMFNVFGEAIDGKPFINNTE-RRSVHQSPPPLVSISSQLQIFETGI 139 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----V 202 +++D+ PL G + G+F G+G+GK+ LL+ + + +S+ +GER RE Sbjct: 140 KIVDVLCPLERGGKAGLFGGAGVGKTVLLTEMIHNMVSHQQGVSIFCGIGERCREGEELY 199 Query: 203 REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 RE + + DN+ V++ +E P R +A+T+AEYF + +VLL++D+I R Sbjct: 200 REMKQAGVLDNM---VMLFGQMNEPPGSRFRIGHSALTMAEYFRDDEKKDVLLLIDNIFR 256 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G++P GY ++ +EL L ERI + + G IT++ +V V D+ Sbjct: 257 FIQAGSEVSGLMGQMPSRMGYQPTLGTELSSLEERI--ANTQNGAITSIQAVYVPADDFT 314 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP A S L +VL+R A EG YP VDPL S S+LA D ++ + H++ Sbjct: 315 DPAAVHTFSHLSATLVLSRKRASEGFYPAVDPLQSSSKLATPNVVGDRHYQVAQQVRHIL 374 Query: 381 HRFEETRDI 389 ++ E +DI Sbjct: 375 AQYNELKDI 383 >gi|325282482|ref|YP_004255023.1| V-type ATP synthase beta chain [Deinococcus proteolyticus MRP] gi|324314291|gb|ADY25406.1| V-type ATP synthase beta chain [Deinococcus proteolyticus MRP] Length = 467 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 89/276 (32%), Positives = 151/276 (54%), Gaps = 11/276 (3%) Query: 94 RISPSACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ S GR + LG+PIDG + + + +S+ + P + R + E+ +TGI I Sbjct: 81 RLGVSKEMIGRRFDGLGRPIDGLPEVVAEQRVSINGQAMNPAS--RAKPEEFIQTGISTI 138 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFI 206 D+ T L GQ++ +F+GSG+ + L + AR V+ + +G REV F Sbjct: 139 DVNTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDFAVVFAAMGLTQREVSFFT 198 Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264 +++ L +SV+ + +D+ + R + P A+T AEY + G +VL+IL IT + Sbjct: 199 QEFERTGALARSVLFLNRADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDITNYCE 258 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI E+P RG+P ++++L L ER G + + G++T + + + D+ PI Sbjct: 259 ALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVDGKPGSVTQIPILSMPDDDITHPI 318 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 D I +G IV++R L +G YPP++PL S+SRL Sbjct: 319 PDLTGYITEGQIVVDRGLNSKGVYPPINPLPSLSRL 354 >gi|302869578|ref|YP_003838215.1| ATP synthase F1 subunit beta [Micromonospora aurantiaca ATCC 27029] gi|315503960|ref|YP_004082847.1| ATP synthase f1, beta subunit [Micromonospora sp. L5] gi|302572437|gb|ADL48639.1| ATP synthase F1, beta subunit [Micromonospora aurantiaca ATCC 27029] gi|315410579|gb|ADU08696.1| ATP synthase F1, beta subunit [Micromonospora sp. L5] Length = 481 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 23/306 (7%) Query: 103 GRVINALGK--------PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 G V NA+G+ I DD G I K P + + + +TGI+VID+ Sbjct: 99 GHVFNAIGECLNLTEGETIQADDRWG-------IHRKAPAFADLEPKTEMLETGIKVIDL 151 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLG 211 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 152 LAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLIAEMTE 211 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 + K+ +V DE P R L+A+T+AEYF K VLL +D+I RF + E+ Sbjct: 212 SGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNIFRFTQAGSEV 271 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +T G +P A GY ++ E+ L ERI + IT++ ++ V D++ DP + Sbjct: 272 STLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADDYTDPAPATTF 329 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRD 388 + LD L RS++++G YP VDPLAS SR+ + +E V++ + ++ R+++ +D Sbjct: 330 AHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKRILQRYKDLQD 389 Query: 389 IRLIGG 394 I I G Sbjct: 390 IIAILG 395 >gi|227498891|ref|ZP_03929031.1| sodium-transporting two-sector ATPase [Acidaminococcus sp. D21] gi|226904343|gb|EEH90261.1| sodium-transporting two-sector ATPase [Acidaminococcus sp. D21] Length = 463 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/330 (30%), Positives = 163/330 (49%), Gaps = 21/330 (6%) Query: 50 VHQGKNSDNLGQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRV 105 +HQ G+V+ I+ D + G+ + V H + +SP GRV Sbjct: 32 IHQANGEVRSGRVLVIDGDRALVQLFESSQGLQASTAKARFVGHGIQLGVSPD--MLGRV 89 Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQ 162 + +G PIDG G + E + MN R + +TG+ ID L GQ Sbjct: 90 FDGMGNPIDG----GPKIIPQEYLDINGAPMNPAARDYPAEFIQTGVSAIDGLNTLVRGQ 145 Query: 163 RIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDY-LGDNLK 215 ++ VF+GSG+ + L + AR D V+ + VG E F+ED+ L Sbjct: 146 KLPVFSGSGLPHAQLAAQIARQAKVLGKDEKFAVVFAAVGITFEEANFFMEDFNRTGALS 205 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274 ++V+ + +++ + R P A+T AEY + + D +VL+I+ IT +A ++RE++ Sbjct: 206 RAVMFINLANDPAVERISTPRMAITAAEYLAFEMDMHVLVIITDITNYADALREVSAARK 265 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E+P RGYP ++++L + ER G +KG+IT + + + D+ PI D I +G Sbjct: 266 EVPGRRGYPGYLYTDLATMYERAGKIRGKKGSITMIPILSMPEDDKTHPIPDLTGYITEG 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I+L+R L +G PP+D L S+SRL DK Sbjct: 326 QIILSRELYRKGLKPPIDVLPSLSRLKDKG 355 >gi|145503262|ref|XP_001437608.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124404759|emb|CAK70211.1| unnamed protein product [Paramecium tetraurelia] Length = 499 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 92/303 (30%), Positives = 158/303 (52%), Gaps = 14/303 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G PID + + + I + P +++ + TGI+V+D+ P G Sbjct: 113 GRIMNVIGDPIDERGPI-ETKIRYPIHREAPSFVDQGSGAEILITGIKVVDLLAPYARGG 171 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ L+ + + + VGER RE + + + + Sbjct: 172 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEMVASGVINLSG 231 Query: 215 -KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 + ++ +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 232 GSRCALIYGQMNEPPGARARVGLTGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVSAL 291 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ ++L +L ERI + +KG+IT+V ++ V D+ DP + + L Sbjct: 292 LGRIPSAVGYQPTLATDLGQLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHL 349 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391 D VL+R+L E G YP VDPL S SR+ D ++ V+ + L+ ++ +DI Sbjct: 350 DATTVLSRALTELGIYPAVDPLDSSSRMMDPNIVGEKHYTVTRGVQKLLQDYKSLQDIIA 409 Query: 392 IGG 394 I G Sbjct: 410 ILG 412 >gi|119350461|gb|ABL63181.1| AtpB [Carteria crucifera] Length = 392 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + ++ I P ++ F+TGI+V+D+ P G Sbjct: 38 LGRIFNVLGEPVDNMGPVETQE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 96 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 97 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 156 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 157 NLSDS--KVALVYGQMNEPPXARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 214 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 273 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 331 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 332 LQDIIAILG 340 >gi|91178136|gb|ABE27303.1| mitochondrial F-ATPase beta subunit [Candida tropicalis] Length = 337 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 161/306 (52%), Gaps = 20/306 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID D + I ++ P + + + +TGI+V+D+ P G Sbjct: 20 GRIINVVGEPID-DRGPIECKERKPIHAEPPSFVEQSTAAEILETGIKVVDLLAPYARGG 78 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 79 KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVINLE 137 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E+ Sbjct: 138 GDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEV 195 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 196 SALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPATTF 253 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VDPL S SRL D E + + + + ++ +D Sbjct: 254 AHLDATTVLSRGISELGIYPAVDPLDSKSRLLDATVVGQEHYDVATGVQQTLQAYKSLQD 313 Query: 389 IRLIGG 394 I I G Sbjct: 314 IIAILG 319 >gi|4519332|dbj|BAA75581.1| ATP synthase beta-subunit [Volvulina pringsheimii] Length = 376 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ D ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVLIED-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|119350523|gb|ABL63212.1| AtpB [Oedogonium cardiacum] Length = 392 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 20/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + + + I P + F++GI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNMGPV-QTEEKLPIHRPAPAFTDLDTRLSIFESGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +ED Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIVEDN 157 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 158 LGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 S LD VL+R LA +G YP VDPLAS S + D + + R++E + Sbjct: 274 FSHLDATTVLSRGLAAKGIYPAVDPLASTSTMLQPWIVGDAHYNCAQKVKETLQRYKELQ 333 Query: 388 DIRLIGG 394 DI I G Sbjct: 334 DIIAILG 340 >gi|416680|sp|Q03235|ATPB_PECFR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|581446|emb|CAA45841.1| ATPase (beta-subunit) [Pectinatus frisingensis] Length = 470 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/299 (31%), Positives = 154/299 (51%), Gaps = 8/299 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV N LG+ +D + + I P ++ + +TGI+V+D+ P G Sbjct: 89 LGRVFNVLGQTVDHNPAPVGNKEFWPIHRPAPKFDEQETSTQILETGIKVVDLIAPYSRG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 +IG+F G+G+GK+ L+ + + S VGER RE + + + K+ Sbjct: 149 GKIGLFGGAGVGKTVLIMELIHNIATQHGGYSVFSGVGERTREGNDLWSEMTESGVINKT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ G + Sbjct: 209 ALVYGQMNEPPGARMRVALTGLTMAEYFRDVQHQDVLLFIDNIFRFIQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + +KG+IT+V +V V D+ DP + + LD Sbjct: 269 PSAVGYQPTLTTDVGALQERI--TSTKKGSITSVQAVYVPADDLTDPGPAATFTHLDATT 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R +AE G YP VDPL S SR+ D D ++ + ++ +++E +DI I G Sbjct: 327 VLSRQIAELGIYPAVDPLDSTSRILDPHVIGEDHYEVARGVQAVLQKYKELQDIIAILG 385 >gi|333024392|ref|ZP_08452456.1| putative ATP synthase F1, beta subunit [Streptomyces sp. Tu6071] gi|332744244|gb|EGJ74685.1| putative ATP synthase F1, beta subunit [Streptomyces sp. Tu6071] Length = 476 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 160/299 (53%), Gaps = 10/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ + I P + + F+TGI+VID+ TP G Sbjct: 97 GKVFNTLGEVLNKPEENANIGERWAIHRTAPRFDELESKTEMFETGIKVIDLLTPYVKGG 156 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN--LKKS 217 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + I D + D+ + K+ Sbjct: 157 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLI-DEMSDSGVIDKT 215 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G + Sbjct: 216 ALVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRM 275 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD Sbjct: 276 PSAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDLTDPAPATTFAHLDATT 333 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+R ++E+G YP VDPL S SR+ D + A D + +++ ++++ +DI I G Sbjct: 334 VLSRPISEKGIYPAVDPLDSTSRILDPRYIAKDHYDTAMRVKNILQKYKDLQDIIAILG 392 >gi|226950035|ref|YP_002805126.1| V-type ATPase, B subunit [Clostridium botulinum A2 str. Kyoto] gi|254764986|sp|C1FTN6|VATB_CLOBJ RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|226843907|gb|ACO86573.1| V-type ATPase, B subunit [Clostridium botulinum A2 str. Kyoto] gi|322806952|emb|CBZ04522.1| V-type ATP synthase subunit B [Clostridium botulinum H04402 065] Length = 461 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 167/332 (50%), Gaps = 13/332 (3%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G+ G+V+ IN D +V + G I + F + S GRV + Sbjct: 34 LHNGEK--RRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFD 91 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 LG P DG + D +I + R ++ +TG+ ID L GQ++ VF Sbjct: 92 GLGNPKDGGPKI-IADEKRDISGIPINPVARNYPDEFIQTGVSAIDGLNTLVRGQKLPVF 150 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ + L + AR SD V+ + +G E + FI+D+ + ++V+ Sbjct: 151 SGSGLPHAELAAQIARQAKVLKSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRAVLF 210 Query: 221 VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + KG +VL+I+ IT + ++RE++ E+P Sbjct: 211 INLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEVPGR 270 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP ++++L + ER G ++G+IT + + + D+ PI D I +G I+L+ Sbjct: 271 RGYPGYLYTDLSTIYERAGRILGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILS 330 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 R L ++G PP+D L S+SRL DK ++ + Sbjct: 331 RELYKKGIMPPIDVLPSLSRLKDKGIGKEKTR 362 >gi|17548034|ref|NP_521436.1| F0F1 ATP synthase subunit beta [Ralstonia solanacearum GMI1000] gi|81592095|sp|Q8XU76|ATPB_RALSO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|17430340|emb|CAD17105.1| probable atp synthase beta chain protein [Ralstonia solanacearum GMI1000] Length = 467 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I K P +TGI+VID+ P G Sbjct: 92 GRIMDVLGRPIDEAGPIA-ADEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E ++ + + R++E RDI I G Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQIVGTEHYEVARRVQQTLQRYKELRDIIAILG 385 >gi|318135996|gb|ADV41650.1| ATP synthase beta subunit [Cinachyrella alloclada] Length = 427 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 92/279 (32%), Positives = 146/279 (52%), Gaps = 14/279 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+ +D + + D I + P + ++ TGI+V+ Sbjct: 55 IRIPVGPSTLGRIMNVIGESVDERGPI-ESDTYASIHQEAPEFVEMSVEQEILVTGIKVV 113 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREF 205 D+ P G +IG+F G+G+GK+ L+ + + + VGER RE E Sbjct: 114 DLLAPYAKGGKIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGVGERTREGNDLYHEM 173 Query: 206 IED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261 IE L D+ K +V +E P R LT +T+AEYF K G +VLL +D+I R Sbjct: 174 IETGVISLKDDKSKVALVYGQMNEPPGARARVALTGLTVAEYFRDKEGKDVLLFIDNIFR 233 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + +KG+IT+V +V V D+ Sbjct: 234 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAVFVPADDLT 291 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 DP + + LD VL+R+++E G YP VDPL S SR+ Sbjct: 292 DPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSTSRI 330 >gi|46909245|gb|AAT06140.1| ATP synthase beta subunit [Eucidaris tribuloides] Length = 427 Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 92/273 (33%), Positives = 146/273 (53%), Gaps = 16/273 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + S I ++ P + ++ TGI+V+D+ P G Sbjct: 64 LGRIINVIGEPIDERGPVPTKKRSA-IHAEAPEFVEMSVTQEILVTGIKVVDLLAPYAKG 122 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210 +IG+F G+G+GK+ L++ A+ V+ VGER RE + + L Sbjct: 123 GKIGLFGGAGVGKTVVIMELINNVAKGHGGFSVLAG-VGERTREGNDLYHEMMEGGLISL 181 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 182 TDDSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEM 241 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 242 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 299 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 300 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMD 332 >gi|262038591|ref|ZP_06011960.1| ATP synthase F1, beta subunit [Leptotrichia goodfellowii F0264] gi|261747460|gb|EEY34930.1| ATP synthase F1, beta subunit [Leptotrichia goodfellowii F0264] Length = 465 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 161/300 (53%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+ +D + L +++ + K P+ Q + +TGI+V+D+ P Sbjct: 86 LGRIFNVLGETVDAGEELIPD--AVDSIHKEAPSFESQGTDSEILETGIKVVDLLAPYLK 143 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ + +S+ VGER RE R+ + L K Sbjct: 144 GGKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGRDLYNEMKESGVLNK 203 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LTA+T+AEYF K G NVLL +D+I RF + E++ G Sbjct: 204 TALVYGQMNEPPGARLRVALTALTMAEYFRDKEGQNVLLFIDNIFRFTQAGAEVSALLGR 263 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD Sbjct: 264 MPSAVGYQPNLATEMGTLQERI--TSTSSGSITSVQAVYVPADDLTDPAPATTFAHLDAT 321 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETRDIRLIGG 394 VL+RS+A G YP VDPL S SR+ + +E V+ T ++ R++E +DI I G Sbjct: 322 TVLSRSIASLGIYPAVDPLDSTSRILEPEIVGNEHYKVARETQRVLQRYKELQDIIAILG 381 >gi|254000516|ref|YP_003052579.1| F0F1 ATP synthase subunit beta [Methylovorus sp. SIP3-4] gi|313202475|ref|YP_004041133.1| ATP synthase f1 subunit beta [Methylovorus sp. MP688] gi|253987195|gb|ACT52052.1| ATP synthase F1, beta subunit [Methylovorus sp. SIP3-4] gi|312441791|gb|ADQ85897.1| ATP synthase F1, beta subunit [Methylovorus sp. MP688] Length = 465 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + D I K P +TGI+VID+ P G Sbjct: 90 GRIMDVLGRPIDEAGPI-ECDERRSIHQKAPSFEELSPSVDLLETGIKVIDLVCPFAKGG 148 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 149 KVGLFGGAGVGKTVNMMELINNIAKQHAGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 208 GMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 267 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 268 SAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 325 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ ++ + R++E RDI I G Sbjct: 326 LSRDIAALGIYPAVDPLDSTSRQLDPLIVGEEHYNVARAVQSTLQRYKELRDIIAILG 383 >gi|269957232|ref|YP_003327021.1| ATP synthase F1 subunit beta [Xylanimonas cellulosilytica DSM 15894] gi|269305913|gb|ACZ31463.1| ATP synthase F1, beta subunit [Xylanimonas cellulosilytica DSM 15894] Length = 493 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 145/273 (53%), Gaps = 8/273 (2%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I K P + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 136 IHRKAPAFKDLESKTSMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQ 195 Query: 188 DKVIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D +S+ VGER RE + I + K+ +V DE P R L+ +T+AE Sbjct: 196 DHGGVSVFAGVGERTREGNDLIHEMEDAGVFDKTALVFGQMDEPPGTRLRIALSGLTMAE 255 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 256 YFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNLADEMGILQERITSTRG 315 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A +G YP VDPL S SR+ D Sbjct: 316 H--SITSLQAIYVPADDYTDPAPATTFAHLDATTELSREIASKGLYPAVDPLTSTSRILD 373 Query: 363 KAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + A+ + + + ++ R +E +DI I G Sbjct: 374 PRYVGAEHYAVATEVKQILQRNKELQDIIAILG 406 >gi|295130799|ref|YP_003581462.1| ATP synthase F1, beta subunit [Propionibacterium acnes SK137] gi|291377228|gb|ADE01083.1| ATP synthase F1, beta subunit [Propionibacterium acnes SK137] gi|313772049|gb|EFS38015.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL074PA1] gi|313810249|gb|EFS47970.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL083PA1] gi|313830579|gb|EFS68293.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL007PA1] gi|314973580|gb|EFT17676.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL053PA1] gi|314975802|gb|EFT19897.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL045PA1] gi|315095854|gb|EFT67830.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL038PA1] gi|327326405|gb|EGE68195.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL096PA2] gi|327448317|gb|EGE94971.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL043PA1] Length = 484 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395 Query: 391 LIGG 394 I G Sbjct: 396 AILG 399 >gi|28210706|ref|NP_781650.1| V-type ATP synthase subunit B [Clostridium tetani E88] gi|75542686|sp|Q896K3|VATB1_CLOTE RecName: Full=V-type ATP synthase beta chain 1; AltName: Full=V-ATPase subunit B 1 gi|28203144|gb|AAO35587.1| V-type sodium ATP synthase subunit B [Clostridium tetani E88] Length = 461 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 102/316 (32%), Positives = 161/316 (50%), Gaps = 13/316 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116 G+V+ IN D +V + G I F IS S GRV + LG+P D G Sbjct: 42 GRVLEINEDKALVQLFEGSAGINIKGSKAKFLGKPLEISVSEDMLGRVFDGLGRPKDEGP 101 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + L + + P A N + +TGI ID L GQ++ VF+GSG+ + Sbjct: 102 RIIPEKRLDINGIPINPVARNYP--SEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPHAQ 159 Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 L + AR SD V+ + VG E F++D+ + +SV+ + +++ I Sbjct: 160 LAAQIARQAKVLNSDSKFAVVFAAVGITFEEAEFFVDDFTKTGAIDRSVLFMNLANDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + KG +VL+IL +T + ++RE++ E+P RGYP +++ Sbjct: 220 ERIATPRMALTTAEYLAFEKGMHVLVILTDLTNYCEALREVSAARKEVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L L ER G + ++G+IT + + + D+ PI D I +G I+L+R L +G Sbjct: 280 DLATLYERAGRIKGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYRKGVM 339 Query: 349 PPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 340 PPIDVLPSLSRLKDKG 355 >gi|314923494|gb|EFS87325.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL001PA1] gi|314966539|gb|EFT10638.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL082PA2] gi|314981464|gb|EFT25558.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL110PA3] gi|315092128|gb|EFT64104.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL110PA4] gi|315103538|gb|EFT75514.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL050PA2] Length = 489 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 10/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 G V N G ++ D S+ + I + PPA + E + +TGI+V+D+ TP G Sbjct: 109 GHVWNVTGDVLNADPSIIEVTERWPI-HRDPPAFDDLEPETEMLETGIKVLDLLTPYVKG 167 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + I + LK + Sbjct: 168 GKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAGVLKDT 227 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T G + Sbjct: 228 ALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRM 287 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + LD Sbjct: 288 PSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAHLDATT 345 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI I G Sbjct: 346 ELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDIIAILG 404 >gi|307153843|ref|YP_003889227.1| ATP synthase F1 subunit beta [Cyanothece sp. PCC 7822] gi|306984071|gb|ADN15952.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 7822] Length = 483 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 102/323 (31%), Positives = 163/323 (50%), Gaps = 16/323 (4%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D+V + C GR+ N LG+P+D + + + I P + + K Sbjct: 79 DIVDTGAPISVPVGKCTLGRIFNVLGEPVDEKGPVNVTE-TFPIHRPAPKLTDLETKPKV 137 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGRE 201 F+TGI+VID+ TP G +IG+F G+G+GK+ ++ + + VGER RE Sbjct: 138 FETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTRE 197 Query: 202 ----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252 E IE + DN ++S +V +E P R L+A+T+AEYF +V Sbjct: 198 GNDLYNEMIESKVINSDNPEESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDV 257 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LL +D+I RF + E++ G +P A GY ++ +++ L ERI + ++G+IT++ + Sbjct: 258 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQA 315 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371 V V D+ DP + + LDG VL+R LA +G YP VDPL S S + E Sbjct: 316 VYVPADDLTDPAPATTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQPGIVGKEHYD 375 Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394 ++ + R++E +DI I G Sbjct: 376 TARAVQSTLQRYKELQDIIAILG 398 >gi|84489926|ref|YP_448158.1| V-type ATP synthase subunit B [Methanosphaera stadtmanae DSM 3091] gi|121731842|sp|Q2NF88|VATB_METST RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|84373245|gb|ABC57515.1| AhaB [Methanosphaera stadtmanae DSM 3091] Length = 467 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 159/310 (51%), Gaps = 17/310 (5%) Query: 94 RISPSACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 +I S GR+ N +GKPIDG D + +L + P A R+ + +TGI I Sbjct: 84 KIGLSTDMLGRIFNGIGKPIDGGPDIIPDQELDVNGSPMNPSA--REFPAEFIQTGISTI 141 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFI 206 D L GQ++ +F+GSG+ + L + AR D VI +G E F+ Sbjct: 142 DGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVIAEDSEFAVIFGAMGITHEEANFFM 201 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264 ++ L++ V + +D+ I R M P A+T AEY + KG +VL+IL IT + Sbjct: 202 NEFEQTGALERVTVFMNLADDPAIERIMTPKMALTTAEYLAFEKGMHVLVILTDITNYCE 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI++ E+P RGYP ++++L + ER G ++G+IT + +++ D+ PI Sbjct: 262 ALREISSARNEVPGRRGYPGYMYTDLAGMYERAGRINGKEGSITQMPILVMPQDDITHPI 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLI 380 D I +G +VL+R L G YPPVD L S+SRL + + ++ VS L Sbjct: 322 PDLTGYITEGQVVLSRELDRTGIYPPVDVLPSLSRLMSGGIGEGRTREDHSGVSD--QLY 379 Query: 381 HRFEETRDIR 390 + E RD+R Sbjct: 380 AAYAEGRDLR 389 >gi|314983719|gb|EFT27811.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL005PA1] gi|327445699|gb|EGE92353.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL043PA2] gi|328760904|gb|EGF74469.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL099PA1] Length = 489 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 109 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 162 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 163 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 222 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 223 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 282 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 283 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 340 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 341 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 400 Query: 391 LIGG 394 I G Sbjct: 401 AILG 404 >gi|313833615|gb|EFS71329.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL056PA1] Length = 484 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395 Query: 391 LIGG 394 I G Sbjct: 396 AILG 399 >gi|90415394|ref|ZP_01223328.1| ATP synthase subunit B [marine gamma proteobacterium HTCC2207] gi|90332717|gb|EAS47887.1| ATP synthase subunit B [marine gamma proteobacterium HTCC2207] Length = 465 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCH 160 GR+++ LG PID +G+ + M I K PPA + +TGI+VID+ P Sbjct: 83 LGRIMDVLGNPIDEKGPIGEKE-RMAIHRK-PPAYDELAASDDLLETGIKVIDLVCPFAK 140 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL--- 214 G ++G+F G+G+GK+ + + + +S+ VGER RE +F + + Sbjct: 141 GGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYYEMQESGVVNI 200 Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E+ Sbjct: 201 ETPSESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEV 260 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + Sbjct: 261 SALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTF 318 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD +VL+R +A +G YP VDPL S SR D E V+ + ++ R++E +D Sbjct: 319 AHLDSTVVLSRDIASKGIYPAVDPLDSTSRQLDPLIIGTEHYAVARGVQSVLQRYKELKD 378 Query: 389 IRLIGG 394 I I G Sbjct: 379 IIAILG 384 >gi|3893822|gb|AAD03393.1| ATPase beta subunit [Nicotiana sylvestris] Length = 555 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 28/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+PID +GD++ + I + P + + ++ TGI+V+D+ Sbjct: 164 ATLGRIINVIGEPIDE-----RGDINTDHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 218 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ F + VGE E RE IE Sbjct: 219 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGFS--VFPGVGEPSAEGNDLYREMIE 276 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 277 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 336 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 337 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 394 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 395 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVL 454 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 455 QNYKNLQDIIAILG 468 >gi|332519270|ref|ZP_08395737.1| ATP synthase F1, beta subunit [Lacinutrix algicola 5H-3-7-4] gi|332045118|gb|EGI81311.1| ATP synthase F1, beta subunit [Lacinutrix algicola 5H-3-7-4] Length = 502 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 159/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG L K G+ + I P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGLGDLPKAGEAGLPIHRNAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 210 DDFMHSMEEGGWDLQKVDKSAMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 270 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 387 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + L+ R++E +DI I G Sbjct: 388 LGDEHYNCAQRVKELLQRYKELQDIIAILG 417 >gi|302381246|ref|YP_003817069.1| ATP synthase F1 subunit beta [Brevundimonas subvibrioides ATCC 15264] gi|302191874|gb|ADK99445.1| ATP synthase F1, beta subunit [Brevundimonas subvibrioides ATCC 15264] Length = 519 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 102/336 (30%), Positives = 167/336 (49%), Gaps = 24/336 (7%) Query: 79 EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 E ++ G V G ++P GR++N +G PID + + I + P Sbjct: 102 EGLTRGQPVTDTGTSILAPVGPGTLGRIMNVVGAPIDEQGPIAT-TMYRPIHREAPTFEE 160 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIIS 193 + + TGI+VID+ P G +IG+F G+G+GK+ L++ A++ V+ Sbjct: 161 QSTSSEILVTGIKVIDLICPYTKGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG 220 Query: 194 LVGERGREVREFIEDYLGDNLK-------------KSVVVVATSDESPILRKMAPLTAVT 240 VGER RE + + + N+ K +V +E P R LT + Sbjct: 221 -VGERTREGNDLYHEMIESNVNVDPSKNGGSTEGSKCALVYGQMNEPPGARARVALTGLA 279 Query: 241 IAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGP 299 AEYF +G +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI Sbjct: 280 QAEYFRDEEGKDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGNLQERI-- 337 Query: 300 SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 + +KG+IT+V ++ V D+ DP + + LD VLNR +A + +P VDPL S SR Sbjct: 338 TSTKKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLNRDIAAQAIFPAVDPLDSTSR 397 Query: 360 LADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + D +E LV+ S+ ++ +++ +DI I G Sbjct: 398 IMDPLVIGEEHYLVARSVQEVLQQYKALKDIIAILG 433 >gi|149913696|ref|ZP_01902229.1| ATP synthase F1, beta subunit [Roseobacter sp. AzwK-3b] gi|149812816|gb|EDM72645.1| ATP synthase F1, beta subunit [Roseobacter sp. AzwK-3b] Length = 474 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 105/321 (32%), Positives = 166/321 (51%), Gaps = 24/321 (7%) Query: 91 GRFRISPSACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTG 148 G I GR++N +G+P+D G + K S+ + P + Q E TG Sbjct: 75 GPITIPVGDVTLGRILNVVGEPVDEGAPIVAKERRSIH---QPAPEFSEQSTESEVLVTG 131 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE-- 201 I+VID+ P G +IG+F G+G+GK+ L+ + KV + + VGER RE Sbjct: 132 IKVIDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGN 189 Query: 202 --VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLL 254 E IE + DNL S V V +E P R LT +T+AE F + G +VL Sbjct: 190 DLYHEMIESNVIKPDNLPDSQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLF 249 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ ++ ERI + + G+IT++ +V Sbjct: 250 FVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKAGSITSIQAVY 307 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373 V D+ DP + + LD VL+R+++E G YP VDPL S SRL D + +E K+ Sbjct: 308 VPADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSTSRLMDPSIVGEEHYKVA 367 Query: 374 SSLTHLIHRFEETRDIRLIGG 394 + ++ R++ +DI I G Sbjct: 368 RDVQGILQRYKSLQDIIAILG 388 >gi|23503601|dbj|BAC20397.1| ATP synthase beta-subunit [Chloromonas radiata] Length = 376 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAETTLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKDGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + LD VL+R LA +G YP VDPL S + + W EK + + + Sbjct: 262 APSVTFTHLDATTVLSRGLASKGIYPAVDPLDSTPTML-QPWIVGEKHYSVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 321 RYKELQDIIAILG 333 >gi|23503623|dbj|BAC20408.1| ATP synthase beta-subunit [Carteria radiosa] Length = 376 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 160/311 (51%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG PID +LG + ++ I P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGDPID---NLGPVNAEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ +DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLSDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W +K S+ + R+ Sbjct: 264 STTFTHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGDKHYDCARSVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|229825576|ref|ZP_04451645.1| hypothetical protein GCWU000182_00938 [Abiotrophia defectiva ATCC 49176] gi|229790139|gb|EEP26253.1| hypothetical protein GCWU000182_00938 [Abiotrophia defectiva ATCC 49176] Length = 468 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 103/357 (28%), Positives = 175/357 (49%), Gaps = 21/357 (5%) Query: 44 CLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCG 103 CL + HQG G ++R I+ G+ ++ ++ ++ G Sbjct: 41 CLMEVSSHQG------GNIVRC---IMLTASEGLSRDM---EVTATGSGIKVPVGEATLG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R+ N G IDG SL + + I + P ++ + +TGI+VID+ P G + Sbjct: 89 RLFNVFGDTIDGGVSL-ENEEHWTIHREPPKFSDQSPAVEILETGIKVIDLLAPYAKGGK 147 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSVV 219 IG+F G+G+GK+ L+ R+ + I + VGER RE + + E + K+ + Sbjct: 148 IGLFGGAGVGKTVLIQELIRNIATEHGGYSIFTGVGERSREGNDLWTEMKESGVIAKTAL 207 Query: 220 VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 V +E P R T +T+AEYF K +VLL +D+I R+ + E++ G +P Sbjct: 208 VFGQMNEPPGARMRVAETGLTMAEYFRDEKNADVLLFIDNIFRYVQAGSEVSALLGRMPS 267 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +++ L ERI ++ G++T+V +V V D+ DP + + LD VL Sbjct: 268 AVGYQPTLATDVGELQERIASTKS--GSVTSVQAVYVPADDITDPAPATTFTHLDATTVL 325 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +R + E+G YP VDPL S SR+ + +E + ++ ++ E +DI I G Sbjct: 326 SRKIVEQGIYPAVDPLESSSRVLEADVVGEEHYNTARKVQEMLQKYRELQDIIAILG 382 >gi|190358737|sp|Q73X59|ATPB_MYCPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 485 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D G+ I K PP + + +TG++V+D+ TP G Sbjct: 106 GHVFNALGHCLD-KPGYGEDFEHWSIHRKPPPFEELEPRTEMLETGLKVVDLLTPYVRGG 164 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK + Sbjct: 165 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLKDTA 224 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AE+F + G +VLL +D+I RF + E++T G +P Sbjct: 225 LVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 284 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 285 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 342 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+ +G +P VDPLAS S + D +E ++ + ++ R+++ +DI I G Sbjct: 343 LSRSVFSKGIFPAVDPLASSSTILDPGVVGEEHYRVAQEVIRILQRYKDLQDIIAILG 400 >gi|11559338|dbj|BAB18827.1| ATP synthase beta-subunit [Volvulina steinii] Length = 376 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVD-NMGIVKVEETLPIHRTAPSFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 150 NLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 210 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETR 387 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E + Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKELQ 326 Query: 388 DIRLIGG 394 DI I G Sbjct: 327 DIIAILG 333 >gi|119715998|ref|YP_922963.1| F0F1 ATP synthase subunit beta [Nocardioides sp. JS614] gi|190358688|sp|A1SHJ1|ATPB_NOCSJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|119536659|gb|ABL81276.1| ATP synthase F1 subcomplex beta subunit [Nocardioides sp. JS614] Length = 484 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/303 (33%), Positives = 157/303 (51%), Gaps = 17/303 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 G+V N LG+ ++ L +G+ I K P + + F+TGI+VID+ TP Sbjct: 103 GKVFNTLGEVLN----LEEGETFEVKERWGIHRKAPAFDQLESKTQMFETGIKVIDLLTP 158 Query: 158 LCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFI-EDYLGDN 213 G +IG+F G+G+GK+ L+ M AR D + + VGER RE + I E Sbjct: 159 YVQGGKIGLFGGAGVGKTVLIQEMIARVAKDHGGVSVFAGVGERTREGNDLIVEMEEAGV 218 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272 + ++ +V DE P R L+A+T+AEYF +G +VLL +D+I RF + E++T Sbjct: 219 IGQTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTL 278 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + L Sbjct: 279 LGRMPSAVGYQPNLADEMGTLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFAHL 336 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D L+R +A G YP VDPL S SR+ D + + ++ R +E +DI Sbjct: 337 DATTELSREIASLGIYPAVDPLTSTSRILDPQYIGQAHYDCAIRIKQILQRNKELQDIIA 396 Query: 392 IGG 394 I G Sbjct: 397 ILG 399 >gi|313825421|gb|EFS63135.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL063PA1] Length = 484 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395 Query: 391 LIGG 394 I G Sbjct: 396 AILG 399 >gi|296112610|ref|YP_003626548.1| ATP synthase F1 beta subunit [Moraxella catarrhalis RH4] gi|295920304|gb|ADG60655.1| ATP synthase F1 beta subunit [Moraxella catarrhalis RH4] gi|326560870|gb|EGE11235.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 7169] gi|326563892|gb|EGE14143.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 46P47B1] gi|326566901|gb|EGE17040.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 103P14B1] gi|326569769|gb|EGE19819.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC8] gi|326570800|gb|EGE20825.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC1] gi|326571625|gb|EGE21640.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis BC7] gi|326575096|gb|EGE25024.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis CO72] gi|326576818|gb|EGE26725.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 101P30B1] gi|326577729|gb|EGE27605.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis O35E] Length = 473 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 158/317 (49%), Gaps = 28/317 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + I + P + + +TGI+VID+ P Sbjct: 80 ATLGRIMDVLGRPIDEAGPV-NAEQKWSIHREAPSYDEQSNSTELLETGIKVIDLLCPFA 138 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------- 205 G ++G+F G+G+GK+ + + +S+ VGER RE +F Sbjct: 139 KGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEAGVVN 198 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-------SSKGDNVLLILDS 258 ED+ K +V +E P R LT +T+AEYF + KG +VLL +D+ Sbjct: 199 TEDF---TQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDEATGKGRDVLLFVDN 255 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I R+ + E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D Sbjct: 256 IYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI--TSTQSGSITSVQAVYVPAD 313 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377 + DP + + LD +VL+R +A +G YP VDPL S SR D +E V+ + Sbjct: 314 DLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSRQLDPQVIGEEHYSVARGVQ 373 Query: 378 HLIHRFEETRDIRLIGG 394 ++ R++E +DI I G Sbjct: 374 EVLQRYKELKDIIAILG 390 >gi|168182706|ref|ZP_02617370.1| V-type ATPase, B subunit [Clostridium botulinum Bf] gi|237796062|ref|YP_002863614.1| V-type ATP synthase subunit B [Clostridium botulinum Ba4 str. 657] gi|259710369|sp|C3L1B0|VATB_CLOB6 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|182674083|gb|EDT86044.1| V-type ATPase, B subunit [Clostridium botulinum Bf] gi|229260534|gb|ACQ51567.1| V-type sodium ATPase, B subunit [Clostridium botulinum Ba4 str. 657] Length = 461 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/335 (29%), Positives = 170/335 (50%), Gaps = 19/335 (5%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G+ G+V+ IN D +V + G I + F + S GRV + Sbjct: 34 LHNGEK--RRGRVLEINKDKALVQLFEGSAGINIKGAKVKFLGKPLELGVSEDMLGRVFD 91 Query: 108 ALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 LG P DG + K D+S ++ V R ++ +TG+ ID L GQ++ Sbjct: 92 GLGNPKDGGPKIIPDEKRDISGIPINPVA----RNYPDEFIQTGVSAIDGLNTLVRGQKL 147 Query: 165 GVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 VF+GSG+ + L + AR SD V+ + +G E + FI+D+ + ++ Sbjct: 148 PVFSGSGLPHAELAAQIARQAKVLNSDSKFAVVFAAIGTTFEEAQYFIDDFTKTGAIDRA 207 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGEL 276 V+ + +++ I R P A+T AEY + KG +VL+I+ IT + ++RE++ E+ Sbjct: 208 VLFINLANDPAIERIATPRMALTAAEYLAFEKGMHVLVIMTDITNYCEALREVSAARKEV 267 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P RGYP ++++L + ER G ++G+IT + + + D+ PI D I +G I Sbjct: 268 PGRRGYPGYLYTDLSTIYERAGRILGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQI 327 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +L+R L ++G PP+D L S+SRL DK ++ + Sbjct: 328 ILSRELYKKGIMPPIDVLPSLSRLKDKGIGKEKTR 362 >gi|22651724|gb|AAM26934.1| ATP synthase beta subunit [Aldrovanda vesiculosa] Length = 492 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 + GR+ N LG+PID +LG D + I P + + F+TGI+V+D+ Sbjct: 101 STTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + +S+ VGER RE + ++ Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESG 217 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 277 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE ++ + + R+ Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGDEHYEIAQRVKQTLQRY 395 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 396 KELQDIIAILG 406 >gi|146271657|emb|CAL25310.1| atpD beta synthase chain [Pseudomonas mohnii] Length = 284 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 8/286 (2%) Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG PID +G+ + I P + + +TGI+VID+ P G ++G+F Sbjct: 1 LGNPIDEAGPIGE-EERWGIHRAAPTFAEQAGGNELLETGIKVIDLVCPFAKGGKVGLFG 59 Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224 G+G+GK+ + R+ + + + VGER RE +F + N L K +V Sbjct: 60 GAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQM 119 Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 +E P R LT +T+AE F +G++VLL +D+I R+ + E++ G +P A GY Sbjct: 120 NEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQP 179 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 ++ E+ L ERI + ++G+IT++ +V V D+ DP + + LD +VL+R +A Sbjct: 180 TLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAS 237 Query: 345 EGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 G YP VDPL S SR D +E + +++ R++E +DI Sbjct: 238 LGIYPAVDPLDSTSRQLDPNVIGNEHYDTARGVQYVLQRYKELKDI 283 >gi|76801167|ref|YP_326175.1| V-type ATP synthase subunit B [Natronomonas pharaonis DSM 2160] gi|121725555|sp|Q3ITC7|VATB_NATPD RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|76557032|emb|CAI48607.1| H(+)-transporting two-sector ATPase subunit B.a (A-type ATP synthase) [Natronomonas pharaonis DSM 2160] Length = 471 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 146/276 (52%), Gaps = 16/276 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+PIDG + + D EI+ R+ E+ +TG+ ID L G Sbjct: 85 LGRVLSGSGEPIDGGPEI-EPDEEREIVGAAINPTAREYPEEFIQTGVSAIDGMNTLIRG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK-------------VIISLVGERGREVREFIED 208 Q++ +F+GSG+ + L AR + VI +G E EF++D Sbjct: 144 QKLPIFSGSGLPHNELALQIARQASVPEEESGDDEAGSEFAVIFGAMGITQEEANEFMDD 203 Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266 + L++SVV + +D+ + R + P A+T AEY + +G +VL+IL +T + ++ Sbjct: 204 FERTGALERSVVFMNLADDPAVERTVTPRMALTTAEYLAFEEGYHVLVILTDMTNYCEAL 263 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REI E+P RGYP ++++L +L ER G E +G++T + + + GD+ PI D Sbjct: 264 REIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQIPILTMPGDDDTHPIPD 323 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 I +G I ++R+L +G PP++ L S+SRL D Sbjct: 324 LTGYITEGQIYIDRNLNSQGIEPPINVLPSLSRLMD 359 >gi|289616256|emb|CBI57052.1| unnamed protein product [Sordaria macrospora] Length = 519 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 16/307 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN G PID + K D I + P + + + TGI+V+D+ P Sbjct: 128 ATLGRIINVTGDPIDERGPI-KTDKFRSIHADAPEFVEQSTTAEILVTGIKVVDLLAPYA 186 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 187 RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVI 245 Query: 212 --DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E Sbjct: 246 QLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSE 305 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++ ++ ERI + KG+IT+V +V V D+ DP + Sbjct: 306 VSALLGRIPSAVGYQPTLAVDMGQMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATT 363 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R ++E G YP VDPL S SR+ D E + + + ++ ++ + Sbjct: 364 FAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYETATRVQQILQEYKSLQ 423 Query: 388 DIRLIGG 394 DI I G Sbjct: 424 DIIAILG 430 >gi|221061747|ref|XP_002262443.1| ATP synthase beta chain, mitochondrial [Plasmodium knowlesi strain H] gi|193811593|emb|CAQ42321.1| ATP synthase beta chain, mitochondrial,putative [Plasmodium knowlesi strain H] Length = 559 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/316 (32%), Positives = 163/316 (51%), Gaps = 31/316 (9%) Query: 103 GRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDIFTPLC 159 GR++N +G+PID GD K ++ I + PP Q E TGI+V+D+ P Sbjct: 165 GRIMNVIGEPIDECGDIKCKK---TLPI-HREPPLFTDQSTEPALLITGIKVVDLIAPYA 220 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGD--- 212 G +IG+F G+G+GK T+L M ++ K + + VGER RE + + + Sbjct: 221 KGGKIGLFGGAGVGK-TVLIMELINNVAKKHGGYSVFAGVGERTREGNDLYHEMITTGVI 279 Query: 213 ------------NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 N K+ +V +E P R LT +T+AEYF + +VLL +D+I Sbjct: 280 KKKKIGNGEYDFNGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEENQDVLLFVDNI 339 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ ++L L ERI + + G+IT+V +V V D+ Sbjct: 340 YRFTQAGSEVSALLGRIPSAVGYQPTLSTDLGALQERI--TTTKNGSITSVQAVYVPADD 397 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 DP + S LD VL+RS+AE G YP VDPL S SR L A++ ++ ++ Sbjct: 398 LTDPAPATTFSHLDATTVLSRSIAELGIYPAVDPLDSTSRMLTPDIVGAEQYEVARNVQQ 457 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 458 ILQDYKSLQDIIAILG 473 >gi|7688341|emb|CAB89740.1| ATP synthase beta subunit [Turnera ulmifolia] Length = 485 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 155/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D I P + F+TGI+V+D+ P Sbjct: 97 ATLGRIFNVLGEPVD---DLGPVDTCTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL---- 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKDSGV 213 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 214 INADNITQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQSVLLFIDNIFRFVQA 273 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 GSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTQEGSITSIQAVYVPADDLTDPAP 331 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + DE + + R++ Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRQIVGDEHYDTAQRVKQTLQRYK 391 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 392 ELQDIIAILG 401 >gi|299065197|emb|CBJ36363.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum CMR15] Length = 467 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 152/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I K P +TGI+VID+ P G Sbjct: 92 GRIMDVLGRPIDEAGPIA-ADEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D + + ++ + + R++E RDI I G Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGTEHYEVADRVKKTLQRYKELRDIIAILG 385 >gi|282853802|ref|ZP_06263139.1| ATP synthase F1, beta subunit [Propionibacterium acnes J139] gi|282583255|gb|EFB88635.1| ATP synthase F1, beta subunit [Propionibacterium acnes J139] gi|315092941|gb|EFT64917.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL060PA1] Length = 484 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 10/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 G V N G ++ D S+ + I + PPA + E + +TGI+V+D+ TP G Sbjct: 104 GHVWNVTGDVLNADPSIIEVTERWPI-HRDPPAFDDLEPETEMLETGIKVLDLLTPYVKG 162 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + I + LK + Sbjct: 163 GKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAGVLKDT 222 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T G + Sbjct: 223 ALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVSTLLGRM 282 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + LD Sbjct: 283 PSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAHLDATT 340 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI I G Sbjct: 341 ELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDIIAILG 399 >gi|246880751|gb|ACS95063.1| ATP synthase CF1 beta subunit [Dunaliella salina] Length = 480 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 159/307 (51%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + G S I + P ++ F+TGI+V+D+ P G Sbjct: 95 LGRIFNVLGEPVDNLGPVNAGQ-SNPIHRQAPTFVDLDTRLSIFETGIKVVDLLAPYRRG 153 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 154 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYGEMKESGVIQEN 213 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 214 NLPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 273 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 274 SALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPASATTF 331 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + + W EK S++ + R++E + Sbjct: 332 THLDACTVLSRGLASKGIYPAVDPLDSTSTML-QPWIIGEKHYSAASNVKETLQRYKELQ 390 Query: 388 DIRLIGG 394 DI I G Sbjct: 391 DIIAILG 397 >gi|323356859|ref|YP_004223255.1| F0F1-type ATP synthase, beta subunit [Microbacterium testaceum StLB037] gi|323273230|dbj|BAJ73375.1| F0F1-type ATP synthase, beta subunit [Microbacterium testaceum StLB037] Length = 482 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 158/300 (52%), Gaps = 16/300 (5%) Query: 102 CGRVINAL-GKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G V+NA G+ I+ + G I K P + + F+TGI+ ID+ TP Sbjct: 106 TGEVLNAAPGEQIEVTERWG-------IHRKAPSFDQLESKTEMFETGIKSIDLLTPYVQ 158 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGDNLKK 216 G +IG+F G+G+GK+ L+ + D +S+ VGER RE + I E K Sbjct: 159 GGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIGEMEEAGVFDK 218 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G Sbjct: 219 TALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGR 278 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 279 MPSAVGYQPNLADEMGVLQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAHLDAT 336 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP +DPL S SR+ D + AD ++ +++ ++ + +E ++I I G Sbjct: 337 TELSREIASKGLYPAIDPLTSTSRILDPRYIGADHYRVATAVKQILQKNKELQEIIAILG 396 >gi|118579288|ref|YP_900538.1| F0F1 ATP synthase subunit beta [Pelobacter propionicus DSM 2379] gi|118501998|gb|ABK98480.1| ATP synthase F1, beta subunit [Pelobacter propionicus DSM 2379] Length = 466 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 153/300 (51%), Gaps = 10/300 (3%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P + C GR+++A G P+D L G+ I + P +TGI+VID+ Sbjct: 89 PVSPQCLGRLLDAFGAPLDDGPPL-SGNERRPIHAHPAPFHETTAASGILETGIKVIDLL 147 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 +P G + G+F G+G+GK+ L+ F + +S+ VGER RE E + Sbjct: 148 SPFVRGGKTGLFGGAGVGKTVLIMEFMHAIVALHRGVSVFAGVGERIREGHELWHEMRDA 207 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 + +++V+ DESP +R L A+T AEY S G VL ++D++ RFA + EI+ Sbjct: 208 GVMPHTLIVLGQMDESPGIRFRVGLAALTYAEYLRDSLGTEVLFLMDNVFRFAQAGSEIS 267 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P GY ++ SE+ L +RI G +T+V +V V D+ +DP +++ Sbjct: 268 GLLGRIPATVGYQPTLMSEVAELEDRI--ISTRSGALTSVQAVYVPADDMSDPAVNAILG 325 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 LD ++L+RS A +G YP VDPL S + L D+ D + + + R+ E D+ Sbjct: 326 HLDSMVILSRSQASKGIYPAVDPLQSTTSLMDRRVLGDRHYAAAEGVREHLARYRELEDM 385 >gi|4519316|dbj|BAA75573.1| ATP synthase beta-subunit [Gonium multicoccum] Length = 376 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVVVSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 QLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|289428559|ref|ZP_06430243.1| ATP synthase F1, beta subunit [Propionibacterium acnes J165] gi|289158253|gb|EFD06472.1| ATP synthase F1, beta subunit [Propionibacterium acnes J165] gi|313807740|gb|EFS46227.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL087PA2] gi|313818777|gb|EFS56491.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL046PA2] gi|313820549|gb|EFS58263.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL036PA1] gi|314924914|gb|EFS88745.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL036PA3] gi|315088511|gb|EFT60487.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL072PA1] gi|332675643|gb|AEE72459.1| ATP synthase subunit beta [Propionibacterium acnes 266] Length = 484 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395 Query: 391 LIGG 394 I G Sbjct: 396 AILG 399 >gi|23503635|dbj|BAC20414.1| ATP synthase beta-subunit [Chlorogonium euchlorum] Length = 376 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + ++ I + P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NLGPVQQNQTLPIHRQAPLFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLPESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK ++ + + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYTTAQNVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|320409252|gb|ADW27218.1| ATP synthase beta subunit [Carinoma mutabilis] Length = 427 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/286 (33%), Positives = 149/286 (52%), Gaps = 24/286 (8%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTG 148 RI GR+IN +G+PID +G + E I + P + ++ TG Sbjct: 55 IRIPVGPETLGRIINVIGEPIDE-----RGPIPTERRSAIHADAPEFVEMSVAQEMLVTG 109 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE + Sbjct: 110 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGND 168 Query: 205 FIEDY-------LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLIL 256 + L D+ K +V +E P R LT +T+AEYF +G +VLL + Sbjct: 169 LYHEMITSGVISLKDDKSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFI 228 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V Sbjct: 229 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVP 286 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 D+ DP + + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 287 ADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSNSRIMD 332 >gi|314962577|gb|EFT06677.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL082PA1] Length = 489 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 109 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 162 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 163 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 222 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 223 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 282 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 283 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 340 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 341 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 400 Query: 391 LIGG 394 I G Sbjct: 401 AILG 404 >gi|313822646|gb|EFS60360.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL036PA2] gi|314960561|gb|EFT04663.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL002PA2] gi|314978732|gb|EFT22826.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL072PA2] gi|314987900|gb|EFT31991.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL005PA2] gi|314989711|gb|EFT33802.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL005PA3] gi|315084747|gb|EFT56723.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL027PA2] gi|315085431|gb|EFT57407.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL002PA3] gi|327331720|gb|EGE73457.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL096PA3] gi|327443496|gb|EGE90150.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL013PA2] gi|328754708|gb|EGF68324.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL020PA1] Length = 489 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 109 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 162 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 163 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 222 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 223 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 282 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 283 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 340 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 341 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 400 Query: 391 LIGG 394 I G Sbjct: 401 AILG 404 >gi|50364930|ref|YP_053355.1| F0F1 ATP synthase subunit beta [Mesoplasma florum L1] gi|81827328|sp|Q6F202|ATPB_MESFL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|50363486|gb|AAT75471.1| ATP synthase beta chain [Mesoplasma florum L1] Length = 479 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/303 (34%), Positives = 155/303 (51%), Gaps = 18/303 (5%) Query: 102 CGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N G ID GK M I P + +TGI+VID+ P Sbjct: 98 LGRMFNVTGHAIDEKPEFTGK---RMPIHRDAPAYEELITNAEILETGIKVIDLMIPFAK 154 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + +S+ VGER RE EFIE + Sbjct: 155 GGKIGLFGGAGVGKTVLIQELINNIAKAHSGVSVFAGVGERTREGNDLYHEFIEAGV--- 211 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATN 272 L K+ +V +E P R LT +TIAE+F K +VLL +D+I RF + E++ Sbjct: 212 LDKTSLVFGQMNEPPGARMRVALTGLTIAEHFRDEKNMDVLLFIDNIFRFTQAGSEVSAL 271 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L ERI + KG+IT+V +V V D+ DP + + L Sbjct: 272 LGRMPSAVGYQPTLSTEMGSLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFTHL 329 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRL 391 D IVL+RS+A G YP VDPL+S SR+ D +E V+ + + ++++ + I Sbjct: 330 DAKIVLDRSIASLGIYPAVDPLSSSSRMLDPEIIGEEHYNVALGVQGTLQKYQDLQSIIA 389 Query: 392 IGG 394 I G Sbjct: 390 ILG 392 >gi|332701910|ref|ZP_08421998.1| ATP synthase subunit beta [Desulfovibrio africanus str. Walvis Bay] gi|332552059|gb|EGJ49103.1| ATP synthase subunit beta [Desulfovibrio africanus str. Walvis Bay] Length = 484 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/265 (36%), Positives = 141/265 (53%), Gaps = 10/265 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N G+PID D+ + + P P R E+ F TGI+ ID+ TPL Sbjct: 84 LGRMFNVFGEPIDNQPP--PTDVVRRSIHRAPLPLSERTPGEEIFLTGIKAIDLLTPLER 141 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKK 216 G + G+F G+G+GK+ L++ + +S +GER RE +E ++ + LK Sbjct: 142 GGKAGLFGGAGVGKTVLITELIHNMAGKYSGVSFFAGIGERIREGQELYQEMIDTGVLKN 201 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGE 275 +V+V DE P R TA+T+AE+F G +VLL++D+I RF + E++T G Sbjct: 202 TVLVFGQMDEPPGSRFRVGHTALTMAEFFRDDLGQDVLLLIDNIFRFIQAGSELSTLLGR 261 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 LP GY ++ +EL +L ERI S G IT++ +V V D+ DP A S L Sbjct: 262 LPSRLGYQPTMGNELSQLEERI--SSSRNGAITSIQAVYVPADDLTDPSAVHTFSHLSAS 319 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRL 360 IVL+R A + YP VDPL S S + Sbjct: 320 IVLSRKRASQSLYPAVDPLQSTSMM 344 >gi|332527643|ref|ZP_08403689.1| F0F1 ATP synthase subunit beta [Rubrivivax benzoatilyticus JA2] gi|332112046|gb|EGJ12022.1| F0F1 ATP synthase subunit beta [Rubrivivax benzoatilyticus JA2] Length = 466 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 158/308 (51%), Gaps = 17/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID + + + I K P ++ +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPIDERGPVDQTHTAT-IHRKAPAYDELSPSQELLETGIKVIDLICPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY------ 209 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMSDSNVV 198 Query: 210 LGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 + +NL +S V V +E P R LT +T+AE F +G +VL +D+I R+ + Sbjct: 199 VQENLSESKVAMVYGQMNEPPGNRLRVALTGLTMAEAFRDEGRDVLFFVDNIYRYTLAGT 258 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 259 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 316 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD +VL+R +A G YP VDPL S SR D +E ++ + R++E Sbjct: 317 TFAHLDATVVLSRDIAALGIYPAVDPLDSTSRQIDPNVVGEEHYSTTRAVQATLQRYKEL 376 Query: 387 RDIRLIGG 394 RDI I G Sbjct: 377 RDIIAILG 384 >gi|16330679|ref|NP_441407.1| F0F1 ATP synthase subunit beta [Synechocystis sp. PCC 6803] gi|114570|sp|P26527|ATPB_SYNY3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|47516|emb|CAA41137.1| ATPase subunit beta [Synechocystis sp. PCC 6803] gi|1653171|dbj|BAA18087.1| ATP synthase b subunit [Synechocystis sp. PCC 6803] Length = 483 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 157/306 (51%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + G+ + I P ++ + + F+TGI+VID+ TP G Sbjct: 97 LGRIFNVLGEPVDNKGPVPAGE-TFPIHRPAPKLVDLETKPQVFETGIKVIDLLTPYRQG 155 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ ++ + + VGER RE + + + N+ Sbjct: 156 GKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTREGNDLYNEMIESNVINAD 215 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 216 KPEESKIALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 275 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 276 SALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 333 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LDG VL+R LA +G YP VDPL S S + + E + + R++E +D Sbjct: 334 AHLDGTTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGSEHYDTAREVQSTLQRYKELQD 393 Query: 389 IRLIGG 394 I I G Sbjct: 394 IIAILG 399 >gi|91178116|gb|ABE27293.1| mitochondrial F-ATPase beta subunit [Candida inconspicua] Length = 337 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 105/308 (34%), Positives = 163/308 (52%), Gaps = 22/308 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLC 159 GR++N +G P+D G D + + + PPA Q E + +TGI+V+D+ P Sbjct: 19 LGRILNVIGDPVD---ERGPIDCKERKPIHQDPPAFVEQSTEAEVLETGIKVVDLLAPYA 75 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 76 RGGKIGLFGGAGVGKTVFIQELINNVAKAHGGFSVFTG-VGERTREGNDLYREMKETGV- 133 Query: 212 DNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 NL+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 134 INLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGS 193 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + Sbjct: 194 EVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAPAT 251 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R ++E G YP VDPL S SRL D A E + + + + ++ Sbjct: 252 TFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVAVVGQEHYDVATQVQETLQAYKSL 311 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 312 QDIIAILG 319 >gi|325264619|ref|ZP_08131349.1| V-type sodium ATPase, B subunit [Clostridium sp. D5] gi|324030281|gb|EGB91566.1| V-type sodium ATPase, B subunit [Clostridium sp. D5] Length = 457 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/350 (29%), Positives = 175/350 (50%), Gaps = 18/350 (5%) Query: 61 QVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GDD 117 +V+ IN + +V + G +S + F + S GRV + LG+PID G + Sbjct: 43 KVLEINGNDALVQLFESATGINLSNSKVRFLGRSMELGVSEDMLGRVFDGLGRPIDEGPE 102 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + + + P A R E+ +TG+ ID L GQ++ +F+ SG+ + L Sbjct: 103 ILPDARMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLNTLVRGQKLPIFSASGLPHAQL 160 Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 + AR S+ V+ + +G E FIE + + ++V+ V +++ I Sbjct: 161 AAQIARQAKVLGSNENFAVVFAAMGITFEESNFFIESFKATGAIDRTVLFVNLANDPAIE 220 Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R P A+T AEY + + D +VL+IL IT +A ++RE++ E+P RGYP ++++ Sbjct: 221 RIATPRMALTAAEYLAFEKDMHVLVILTDITNYADALREVSAARKEVPGRRGYPGYMYTD 280 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 L L ER G +KG+IT + + + D+ PI D I +G I+L+R L +G P Sbjct: 281 LASLYERAGRQNGKKGSITMIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYRKGITP 340 Query: 350 PVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRFEETRDIRLIGG 394 P+D L S+SRL DK AD ++ L R ++ +++ +I G Sbjct: 341 PIDVLPSLSRLKDKGIGEGKTRADHSNTLNQLFAAYARGKDAKELMVILG 390 >gi|315077791|gb|EFT49842.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL053PA2] Length = 489 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 109 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 162 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 163 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 222 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 223 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 282 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 283 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 340 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 341 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 400 Query: 391 LIGG 394 I G Sbjct: 401 AILG 404 >gi|255070295|ref|XP_002507229.1| H+-or Na+-translocating f-type, v-type and A-type ATPase superfamily [Micromonas sp. RCC299] gi|226522504|gb|ACO68487.1| H+-or Na+-translocating f-type, v-type and A-type ATPase superfamily [Micromonas sp. RCC299] Length = 536 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 19/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + + ++ I + PP +++ + TGI+V+D+ P G Sbjct: 148 GRIMNVIGEPIDECGPI-ETSSTLAIHREAPPFVDQSTEMEMLVTGIKVVDLLAPYQKGG 206 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L++ A++ V VGER RE E IE LG Sbjct: 207 KIGLFGGAGVGKTVFIMELINNIAKAHGGFSVFAG-VGERTREGNDLYHEMIEGGVIKLG 265 Query: 212 DNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 + K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 266 NQASDSKCTLVYGQMNEPPGARARVGLTGLTVAEYFRDFEGQDVLLFVDNIFRFTQANSE 325 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ ++L L ERI + KG+IT+V ++ V D+ DP + Sbjct: 326 VSALLGRIPSAVGYQPTLATDLGGLQERI--TTTTKGSITSVQAIYVPADDLTDPAPATT 383 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387 + LD VL+R +AE G YP VDPL S SR L+ A + + ++ ++ + Sbjct: 384 FAHLDATTVLSRGIAELGIYPAVDPLDSTSRMLSPLALGEEHYATARGVQKVLQDYKNLQ 443 Query: 388 DIRLIGG 394 DI I G Sbjct: 444 DIIAILG 450 >gi|241664766|ref|YP_002983126.1| F0F1 ATP synthase subunit beta [Ralstonia pickettii 12D] gi|309780425|ref|ZP_07675175.1| ATP synthase F1, beta subunit [Ralstonia sp. 5_7_47FAA] gi|240866793|gb|ACS64454.1| ATP synthase F1, beta subunit [Ralstonia pickettii 12D] gi|308920818|gb|EFP66465.1| ATP synthase F1, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 469 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I K P +TGI+VID+ P G Sbjct: 94 GRIMDVLGRPIDEAGPIAS-DEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 152 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 153 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 212 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 271 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 272 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 329 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E ++ + + R++E RDI I G Sbjct: 330 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILG 387 >gi|116073664|ref|ZP_01470926.1| F0F1 ATP synthase subunit beta [Synechococcus sp. RS9916] gi|116068969|gb|EAU74721.1| F0F1 ATP synthase subunit beta [Synechococcus sp. RS9916] Length = 486 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 160/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + K + I + P + K F+TGI+VID+ P Sbjct: 95 ATLGRIFNVLGEPVDEQGPV-KATATAPIHREAPKLTELETKPKVFETGIKVIDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 154 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 213 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 ++L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 214 SEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ER+ + + G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERVASTLE--GSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VLNR+LA +G YP VDPL S S + A DE + ++ + R++E Sbjct: 332 TFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|16416736|gb|AAL18392.1|AF313544_1 ATP synthase beta chain [Isoetes engelmannii] Length = 395 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D S+ + I P F+TGI+V+D+ P Sbjct: 5 ATLGRIFNVLGEPVDNSGSV-DASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIN 123 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 K +V +ESP R LTA+T+AEYF +VLL +D+I RF + Sbjct: 124 EQNISESKVALVYGQMNESPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEQHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAILG 309 >gi|83816835|ref|YP_446528.1| F0F1 ATP synthase subunit beta [Salinibacter ruber DSM 13855] gi|294508462|ref|YP_003572520.1| ATP synthase beta chain [Salinibacter ruber M8] gi|118573742|sp|Q2RZV3|ATPB_SALRD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|83758229|gb|ABC46342.1| ATP synthase F1, beta subunit [Salinibacter ruber DSM 13855] gi|294344790|emb|CBH25568.1| ATP synthase beta chain [Salinibacter ruber M8] Length = 500 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 110/356 (30%), Positives = 181/356 (50%), Gaps = 48/356 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 GR+ N +G+PIDG L + D+ + + PP N ++ +TGI+V+D+ P+ Sbjct: 93 GRLFNVVGQPIDG---LPEPDVDERRAIHQDPPEYNELTGSQEVLETGIKVMDLIQPVPK 149 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL--- 210 G ++G+F G+G+GK+ L+ + + S VGER RE +RE IE + Sbjct: 150 GGKVGLFGGAGVGKTVLIMELINNIAKAHEGLSVFSGVGERTREGNDLLREMIEAGVMTY 209 Query: 211 GDNLKKSV----------------------VVVATSDESPILRKMAPLTAVTIAEYFSS- 247 G+ ++S+ +V +E P R LT +TIAEYF Sbjct: 210 GEEFRESMESGGWDLDKVDFDEMNSESNISLVFGQMNEPPGARARVGLTGLTIAEYFRDL 269 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 G +VL LD+I RF + +E++ G +P A GY ++ SE+ L ERI + ++G+I Sbjct: 270 GGRDVLFFLDNIFRFVQAGQEMSALMGRMPSAVGYQPTLASEMGDLQERI--TSTQEGSI 327 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWS 366 T+ +V V D+ DP + + LD VL+R L+ +G YP +DPL S S+ L ++A Sbjct: 328 TSFQAVYVPADDLTDPAPATTFAHLDCTTVLSRQLSTQGIYPAIDPLDSTSQMLNERALG 387 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419 + + + ++ R+EE +DI I G+D + D +AV++ + FL Q Sbjct: 388 TEHYETAQDVKEILQRYEELQDIIAI----LGMDELSDEDKQAVNRARRVQRFLSQ 439 >gi|302392947|ref|YP_003828767.1| ATP synthase F1 subunit beta [Acetohalobium arabaticum DSM 5501] gi|302205024|gb|ADL13702.1| ATP synthase F1 subcomplex beta subunit [Acetohalobium arabaticum DSM 5501] Length = 473 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 156/306 (50%), Gaps = 12/306 (3%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDI 154 P C GR+ N LG ID + D + + PP Q F+TGI+V+D+ Sbjct: 87 PVGKDCLGRIFNVLGDTIDQQGEVDADDYRP--IHQDPPEFEEQSTSTEIFETGIKVVDL 144 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYL 210 P G ++G+F G+G+GK+ L+ + + S VGER RE + ++E Sbjct: 145 LAPYVSGGKVGLFGGAGVGKTVLIMELINRIATEHGGFSVFSGVGERTREGNDLWLEMKE 204 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269 L K +V +E P R LT +T+AE+F + G +VL+ +D+I RF + E+ Sbjct: 205 SGVLDKVALVYGQMNEPPGARMRVGLTGLTMAEHFRDEFGSDVLMFIDNIFRFIQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ DP + Sbjct: 265 SALLGRMPSAVGYQPTLATDVGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RSL E+G YP VDPL S S + D + V+ + + R+++ +D Sbjct: 323 AHLDATTVLSRSLTEKGIYPAVDPLDSTSTILDPGIIGERHYNVAREVQETLQRYQDLQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|269104942|ref|ZP_06157638.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae CIP 102761] gi|268161582|gb|EEZ40079.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae CIP 102761] Length = 372 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/295 (32%), Positives = 154/295 (52%), Gaps = 10/295 (3%) Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165 +N LG+PID +G+ + I P + +TG++VID+ P G +IG Sbjct: 1 MNVLGEPIDECGEIGE-ETRYAIHRSAPSYEEQANSTALLETGVKVIDLICPFAKGGKIG 59 Query: 166 VFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-EDYLGDNLKKSVVV 220 +F G+G+GK+ L++ A++ V VGER RE +F E L K +V Sbjct: 60 LFGGAGVGKTVNMMELINNIAKAHSGLSVFTG-VGERTREGNDFYYEMKEAGVLDKVSMV 118 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 +E P R LT +TIAE F +G +VLL +D+I R+ + E++ G +P A Sbjct: 119 YGQMNEPPGNRLRVALTGLTIAERFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAV 178 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD +VL+R Sbjct: 179 GYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSR 236 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 ++A G YP +DPL S SR D E ++ + ++ R++E +DI I G Sbjct: 237 NIAALGLYPAIDPLDSTSRQLDPLVVGTEHYEVARGVQTVLQRYKELKDIIAILG 291 >gi|313764229|gb|EFS35593.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL013PA1] gi|313791921|gb|EFS40022.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL110PA1] gi|313812724|gb|EFS50438.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL025PA1] gi|313816322|gb|EFS54036.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL059PA1] gi|314915707|gb|EFS79538.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL005PA4] gi|315080418|gb|EFT52394.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL078PA1] gi|315101472|gb|EFT73448.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL046PA1] gi|315105845|gb|EFT77821.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL030PA1] gi|315108764|gb|EFT80740.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL030PA2] gi|327450558|gb|EGE97212.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL087PA3] gi|328753975|gb|EGF67591.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL087PA1] Length = 489 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 109 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 162 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 163 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 222 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 223 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 282 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 283 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 340 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 341 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 400 Query: 391 LIGG 394 I G Sbjct: 401 AILG 404 >gi|300789594|ref|YP_003769885.1| F-type H+-transporting ATPase subunit beta [Amycolatopsis mediterranei U32] gi|299799108|gb|ADJ49483.1| F-type H+-transporting ATPase subunit beta [Amycolatopsis mediterranei U32] Length = 475 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 161/302 (53%), Gaps = 17/302 (5%) Query: 103 GRVINALGKPID----GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 G V NALG+ +D GDD G I P + + +TG++V+D+ TP Sbjct: 97 GHVYNALGECLDEPGYGDDLERWG-----IHRNAPSFDQLEGKTEMLETGLKVVDLLTPY 151 Query: 159 CHGQRIGVFAGSGIGKSTLL-SMFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E + Sbjct: 152 VQGGKIGLFGGAGVGKTVLIKEMITRVARNFGGTSVFAGVGERTREGNDLFLEMSEDGVI 211 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 212 NDTALVFGQMDEPPGTRMRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLL 271 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 272 GRMPSAVGYQPTLADEMGQLQERITSTRGR--SITSMQAIYVPADDYTDPAPAATFAHLD 329 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLI 392 L+RS+ ++G +P VDPLAS S + D A D ++ S + ++ +++E +DI I Sbjct: 330 ATTELSRSVFQKGIFPAVDPLASTSTILDPAIVGEDHYRVASEVIRILQKYKELQDIIAI 389 Query: 393 GG 394 G Sbjct: 390 LG 391 >gi|269792470|ref|YP_003317374.1| H(+)-transporting two-sector ATPase [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100105|gb|ACZ19092.1| H(+)-transporting two-sector ATPase [Thermanaerovibrio acidaminovorans DSM 6589] Length = 472 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 16/311 (5%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S GR+ N G+PIDG + + S++I +R + +TGI ID P Sbjct: 83 SKDMLGRIFNGRGEPIDGGAPIIP-EASLDINGFPMNPYSRDYPSEFIQTGISTIDGMNP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ +F+GSG+ + + + AR + F V+ + +G E F++D+ Sbjct: 142 LVRGQKLPIFSGSGLPHNRMAAQIARQATVISGHEAF-AVVFAAMGITFEEATFFMDDFR 200 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268 ++++V+ V +D+ I R P A+T AEY + K +VL+IL +T + ++RE Sbjct: 201 KTGAIERTVMFVNLADDPAIERITTPRLALTCAEYLAFEKNMHVLVILTDLTNYCEALRE 260 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I+ E+P RGYP ++++L + ER G + G+IT + + + D+ PI D Sbjct: 261 ISAARKEVPGRRGYPGYLYTDLATMYERAGRLRGKSGSITQLPILTMPEDDKTHPIPDLT 320 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRF 383 I +G I+L+R L +G YPPVD + S+SRL DK D L++ L R Sbjct: 321 GYITEGQIILSRGLHRKGIYPPVDVMPSLSRLKDKGIGKGKTREDHADLMNQLFAAYARG 380 Query: 384 EETRDIRLIGG 394 +E +++ +I G Sbjct: 381 KEAKELAVILG 391 >gi|118619158|ref|YP_907490.1| F0F1 ATP synthase subunit beta [Mycobacterium ulcerans Agy99] gi|183984058|ref|YP_001852349.1| ATP synthase beta chain AtpD [Mycobacterium marinum M] gi|166201720|sp|A0PUK0|ATPB_MYCUA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740653|sp|B2HQK2|ATPB_MYCMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118571268|gb|ABL06019.1| ATP synthase beta chain AtpD [Mycobacterium ulcerans Agy99] gi|183177384|gb|ACC42494.1| ATP synthase beta chain AtpD [Mycobacterium marinum M] Length = 483 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 15/301 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMN--RQRVEKGFKTGIRVIDIFTPLC 159 G V NALG D D G G D + + PPA R E +TG++V+D+ TP Sbjct: 104 GHVFNALG---DCLDEPGYGEDFEHWSIHRKPPAFEDLEPRTEM-LETGLKVVDLLTPYV 159 Query: 160 HGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215 G +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK Sbjct: 160 RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLK 219 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 + +V DE P R L+A+T+AE+F + G +VLL +D+I RF + E++T G Sbjct: 220 DTALVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLG 279 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 280 RMPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDA 337 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 L+R++ +G +P VDPLAS S + D DE ++ + ++ R+++ +DI I Sbjct: 338 TTELSRAVFSKGIFPAVDPLASSSTILDPGVVGDEHYRVAQEVIRILQRYKDLQDIIAIL 397 Query: 394 G 394 G Sbjct: 398 G 398 >gi|289425481|ref|ZP_06427258.1| ATP synthase F1, beta subunit [Propionibacterium acnes SK187] gi|289154459|gb|EFD03147.1| ATP synthase F1, beta subunit [Propionibacterium acnes SK187] gi|313801597|gb|EFS42837.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL110PA2] gi|313827384|gb|EFS65098.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL063PA2] gi|314917924|gb|EFS81755.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL050PA1] gi|314920307|gb|EFS84138.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL050PA3] gi|314931527|gb|EFS95358.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL067PA1] gi|314955538|gb|EFS99941.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL027PA1] gi|314957912|gb|EFT02015.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL002PA1] gi|315098758|gb|EFT70734.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL059PA2] gi|327453360|gb|EGF00015.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL092PA1] gi|327454103|gb|EGF00758.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL083PA2] gi|328753186|gb|EGF66802.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL025PA2] Length = 484 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395 Query: 391 LIGG 394 I G Sbjct: 396 AILG 399 >gi|183206606|gb|ACC54501.1| ATP synthase beta subunit [Prismatocarpus fruticosus] Length = 477 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 198 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 199 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 376 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 377 YKELQDIITILG 388 >gi|172040396|ref|YP_001800110.1| F0F1 ATP synthase subunit beta [Corynebacterium urealyticum DSM 7109] gi|226740183|sp|B1VFY7|ATPB_CORU7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|171851700|emb|CAQ04676.1| ATP synthase beta chain [Corynebacterium urealyticum DSM 7109] Length = 482 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 167/299 (55%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D + LG+ D + + PPA + + + +TG++VID+ TP G Sbjct: 104 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDELEGKTEILETGVKVIDLLTPYVKG 161 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 162 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 221 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF +G +VLL +D+I RF + E++T G + Sbjct: 222 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQGQDVLLFIDNIFRFTQAGSEVSTLLGRM 281 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI S K K +IT++ +V V D++ DP + + LD Sbjct: 282 PSAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATT 339 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A +G YP V+PL S SR+ + ++ ++ + +++ + +E +DI I G Sbjct: 340 ELDRAIASKGIYPAVNPLTSTSRILEPGIVGEKHYEVAQRVINILQKNKELQDIIAILG 398 >gi|183206558|gb|ACC54477.1| ATP synthase beta subunit [Campanula lanata] Length = 479 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 175/366 (47%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 35 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 94 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 95 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 151 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + + + Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVX-ERTREXNDLYXEMKDSGVINEQ 210 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 211 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 270 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 271 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 328 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 329 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 388 Query: 389 IRLIGG 394 I I G Sbjct: 389 IITILG 394 >gi|197132370|gb|ACH47703.1| ATP synthase CF1 beta subunit [Erodium chrysanthum] Length = 498 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D SLG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---SLGPVDTRTTSPIHRSAPDFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDY 209 P G +IG+F G+G+GK+ L+ + +S+ VGER RE +E E Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESG 220 Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|121607476|ref|YP_995283.1| F0F1 ATP synthase subunit beta [Verminephrobacter eiseniae EF01-2] gi|190358710|sp|A1WF58|ATPB_VEREI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|121552116|gb|ABM56265.1| ATP synthase F1, beta subunit [Verminephrobacter eiseniae EF01-2] Length = 471 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 157/308 (50%), Gaps = 17/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID + + L+ I K P + +TGI+VID+ P Sbjct: 86 ATLGRIMDVLGAPIDERGPVDQ-TLTASIHRKAPAYDELSPSQDLLETGIKVIDLVCPFA 144 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGD--- 212 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 145 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMADSGVV 203 Query: 213 NLKK-----SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 NL+K +V +E P R LT +TIAE F +G +VL +D+I R+ + Sbjct: 204 NLEKLENSKVAMVYGQMNEPPGNRLRVALTGLTIAESFRDEGRDVLFFVDNIYRYTLAGT 263 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 264 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 321 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD +VL+R +A G YP VDPL S SR D E V+ ++ + R++E Sbjct: 322 TFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPNVVGQEHYNVARAVQGTLQRYKEL 381 Query: 387 RDIRLIGG 394 RDI I G Sbjct: 382 RDIIAILG 389 >gi|319954472|ref|YP_004165739.1| ATP synthase f1 subcomplex beta subunit [Cellulophaga algicola DSM 14237] gi|319423132|gb|ADV50241.1| ATP synthase F1 subcomplex beta subunit [Cellulophaga algicola DSM 14237] Length = 501 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 160/306 (52%), Gaps = 11/306 (3%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGI 149 G+ + GR+ + G ID ++L +L + + ++PP ++++ + F+TGI Sbjct: 83 GQLSVPVGKELMGRMFDVFGNTIDHGEALP--ELPRKNVHQLPPPLSKRSTKSEIFETGI 140 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI 206 + ID+ PL HG G+F G+G+GK+ LL+ + IS+ +GER RE E Sbjct: 141 KAIDVMVPLQHGGNAGLFGGAGVGKTVLLTEMIHNMVGYHQGISMFCGIGERCREGHELY 200 Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 D D LK V++ +E P R A+T+AEYF + +VLL++D++ RF Sbjct: 201 HDMKKADVLKDMVMMFGQMNEPPGARFRVGHAALTMAEYFRDDEHRDVLLLIDNVFRFIQ 260 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G++P GY ++ +EL +L ERI + + G IT++ +V V D+ DP Sbjct: 261 AGMEVSGLMGQMPSRLGYQPTLGTELAKLEERI--ANTDTGAITSIQAVYVPADDLTDPA 318 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 A S L I L+R A EG +P +D L S S++A + L+ + + ++ Sbjct: 319 AVHTFSHLSASITLSRKRAGEGLFPAIDLLQSSSKMATPGVIGERHYHLLQQIKQTLAQY 378 Query: 384 EETRDI 389 EE +DI Sbjct: 379 EELKDI 384 >gi|314967560|gb|EFT11659.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL037PA1] Length = 484 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395 Query: 391 LIGG 394 I G Sbjct: 396 AILG 399 >gi|183206580|gb|ACC54488.1| ATP synthase beta subunit [Campanula grossheimii] Length = 465 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 28 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 87 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 88 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 144 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 203 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 204 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 263 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 264 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 321 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 322 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 381 Query: 389 IRLIGG 394 I I G Sbjct: 382 IITILG 387 >gi|167522261|ref|XP_001745468.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775817|gb|EDQ89439.1| predicted protein [Monosiga brevicollis MX1] Length = 495 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 19/308 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + K D I ++ P + + + +TGI+V+D+ P Sbjct: 109 ATLGRIMNVIGEPIDERGPI-KADKYAPIHAEAPELEDMKTEAEILETGIKVVDLLAPYA 167 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ L+ + A++ V VGER RE + + + Sbjct: 168 KGGKIGLFGGAGVGKTVLIMELINNVAKAHSGFSVFAG-VGERTREGNDLYHEMIEGGVI 226 Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 GD+ K +V +E P R LT +T+AE F +G +VLL +D+I RF + Sbjct: 227 QLEGDS--KVALVYGQMNEPPGARARVALTGLTVAESFRDQGRDVLLFIDNIFRFTQAGS 284 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ + ERI + G+IT+V +V V D+ DP + Sbjct: 285 EVSALLGRIPSAVGYQPTLATDMGAMQERI--TTTTVGSITSVQAVYVPADDLTDPAPAT 342 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R +AE G YP VDPL S SR+ D + + K + ++ ++ Sbjct: 343 TFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDVSVVGERHYKTARDVQKILQDYKSL 402 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 403 QDIIAILG 410 >gi|163840193|ref|YP_001624598.1| F0F1 ATP synthase subunit beta [Renibacterium salmoninarum ATCC 33209] gi|162953669|gb|ABY23184.1| ATP synthase beta chain [Renibacterium salmoninarum ATCC 33209] Length = 490 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 153/293 (52%), Gaps = 8/293 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG+P+D +S + I K P + + +TGI+ ID+ TP G Sbjct: 109 GHIFNVLGQPLDVAESEIQYTERWPIHRKPPSFDQLEGSTEMLETGIKSIDLLTPYIKGG 168 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 169 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEESGVLKDTA 228 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 229 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 288 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 289 SAVGYQPNLADEMGLLQERITSTKGR--SITSMQAVYVPADDYTDPAPAATFAHLDATTE 346 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389 L+R +A G YP +DPL S SR+ D + D + ++ + +E +DI Sbjct: 347 LSREIASRGLYPAIDPLTSTSRILDPQYIGKDHYDTAVRVKQILQKNKELQDI 399 >gi|50842719|ref|YP_055946.1| F0F1 ATP synthase subunit beta [Propionibacterium acnes KPA171202] gi|81826439|sp|Q6A8C7|ATPB_PROAC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|50840321|gb|AAT82988.1| ATP synthase beta chain [Propionibacterium acnes KPA171202] Length = 484 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDTATQVKQILQRNKELQDII 395 Query: 391 LIGG 394 I G Sbjct: 396 AILG 399 >gi|90409081|ref|ZP_01217205.1| ATP synthase subunit B [Psychromonas sp. CNPT3] gi|90309808|gb|EAS37969.1| ATP synthase subunit B [Psychromonas sp. CNPT3] Length = 465 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 153/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+P+D + + EI + P + + GI+VID+ P G Sbjct: 84 GRILNVLGEPVDECGPV-EATEHYEIHREAPSYEEQAISVDTLEVGIKVIDLICPFARGG 142 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 143 KIGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVEN 202 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 L K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 203 PELSKVAMVYGQMNEPPGCRLRVALTGLTMAERFRDEGKDVLLFIDNIYRYTLAGTEVSA 262 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 263 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKLGSITSIQAVYVPADDLTDPSPATTFAH 320 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD IVL+R +A G YP +DPL S SR+ D E + + ++ R++E +DI Sbjct: 321 LDATIVLSRQIASLGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQSILQRYKELKDII 380 Query: 391 LIGG 394 I G Sbjct: 381 AILG 384 >gi|33865048|ref|NP_896607.1| F0F1 ATP synthase subunit beta [Synechococcus sp. WH 8102] gi|81835154|sp|Q7U8U7|ATPB_SYNPX RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|33638732|emb|CAE07027.1| ATP synthase beta subunit [Synechococcus sp. WH 8102] Length = 487 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + I P + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPV-NASATAPIHRDAPNLTELETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ER+ + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERV--ASTVEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEET 386 + LD VLNR+LA +G YP VDPL S S + A DE + L + R++E Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARLVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|23503615|dbj|BAC20404.1| ATP synthase beta-subunit [Chlamydomonas kuwadae] Length = 376 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + DL + I + P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGPVDSTDL-LPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLQDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFVDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 208 EVSALLGRVPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAV 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK + + + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQQIKRTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|119475220|ref|ZP_01615573.1| ATP synthase F1, beta subunit [marine gamma proteobacterium HTCC2143] gi|119451423|gb|EAW32656.1| ATP synthase F1, beta subunit [marine gamma proteobacterium HTCC2143] Length = 465 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 103/339 (30%), Positives = 166/339 (48%), Gaps = 16/339 (4%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSME 127 +V +G E +S G +V G P GR+++ LG PID +G+ + + Sbjct: 49 VVRTIAMGSSEGVSRGLVVESTGAPISVPVGIETLGRIMDVLGNPIDECGPIGEKERA-S 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I K P E +TGI+VID+ P G ++G+F G+G+GK+ + + Sbjct: 108 IHRKAPAYDELSASEDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAL 167 Query: 188 DKVIISL---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPL 236 + +S+ VGER RE +F + + K +V +E P R L Sbjct: 168 EHSGLSVFAGVGERTREGNDFYYEMQESGVVNIEEPSKSKVAMVYGQMNEPPGNRLRVAL 227 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T +T+AE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ER Sbjct: 228 TGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAQEMGELQER 287 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 I + + G+IT++ +V V D+ DP + + LD +VL+R +A +G YP VDPL S Sbjct: 288 I--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLDS 345 Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 SR D E + ++ R++E +DI I G Sbjct: 346 TSRQLDPLIIGTEHYDTARGVQSVLQRYKELKDIIAILG 384 >gi|34581172|ref|ZP_00142652.1| ATP synthase beta chain [Rickettsia sibirica 246] gi|28262557|gb|EAA26061.1| ATP synthase beta chain [Rickettsia sibirica 246] Length = 473 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149 RI GR++N +G+PIDG KGD+ +S K P Q E+ TGI Sbjct: 80 RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206 +VID+ P G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194 Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256 + + + K +V +E P R L+ +TIAE F ++G +VL + Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ S++ L ERI + + G+IT+V ++ V Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLASDMGELQERI--TSTKYGSITSVQAIYVP 312 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 373 VQQVLQTYKSLQDIITILG 391 >gi|320582839|gb|EFW97056.1| Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase [Pichia angusta DL-1] Length = 503 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/310 (33%), Positives = 164/310 (52%), Gaps = 26/310 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR+IN +G+PID +G + + + + PP+ Q E + +TGI+V+D+ P Sbjct: 117 LGRIINVVGEPIDE-----RGPIECKQRNPIHADPPSFVEQSTEAEVLETGIKVVDLLAP 171 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E Sbjct: 172 YARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETG 230 Query: 210 LGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + NL+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 231 V-INLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQA 289 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + KG++T+V +V V D+ DP Sbjct: 290 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTRKGSVTSVQAVYVPADDLTDPAP 347 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SRL D + E + + + + ++ Sbjct: 348 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVSVVGQEHYDVATGVQQTLQAYK 407 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 408 SLQDIIAILG 417 >gi|158524738|gb|ABW71263.1| mitochondrial ATP synthase beta subunit [Terebratulina retusa] Length = 428 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 95/285 (33%), Positives = 147/285 (51%), Gaps = 22/285 (7%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTG 148 RI GR+IN +G+ ID +G + E I + P + ++ +TG Sbjct: 55 IRIPVGQETLGRIINVIGEAIDE-----RGPIPTERRAAIHQEAPEFVEMSVAQEILETG 109 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE---- 201 I+V+D+ P G +IG+F G+G+GK+ L+ + + + VGER RE Sbjct: 110 IKVVDMLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTRESNDL 169 Query: 202 VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILD 257 E IE L D+ K +V +E P R LT +T+AEYF +G +VLL +D Sbjct: 170 YHEMIEGGVISLKDDTSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFID 229 Query: 258 SITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDG 317 +I RF + E++ G +P A GY ++ +++ + ERI + KG+IT+V ++ V Sbjct: 230 NIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTNKGSITSVQAIYVPA 287 Query: 318 DNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 D+ DP + + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 288 DDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILD 332 >gi|183206594|gb|ACC54495.1| ATP synthase beta subunit [Wahlenbergia hederacea] Length = 467 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 198 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 199 GVINEQKFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 376 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 377 YKELQDIITILG 388 >gi|114553|sp|P22663|VATB_METBA RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|149821|gb|AAA72216.1| ATPase beta subunit [Methanosarcina barkeri] Length = 460 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 105/354 (29%), Positives = 179/354 (50%), Gaps = 36/354 (10%) Query: 60 GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 G+V+ + DIV I G+ +E + VF ++ S GR+++ G+P+DG Sbjct: 42 GEVLDSSSDIVVIQIFEGTTGLDKECGV---VFTGETLKLPASIDLLGRILSGSGEPLDG 98 Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQRIGVFA 168 D L +M +++PP K F +TGI ID L GQ++ +F+ Sbjct: 99 GPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRGQKLPIFS 150 Query: 169 GSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVV 221 SG+ + + AR S+ V+ + +G E + F+ D+ L+++VV + Sbjct: 151 ASGLPHNEIALQIARQAAVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFL 210 Query: 222 ATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVAR 280 +D+ + R + P A+T AEY + G +VL+IL IT +A ++R++ E+P R Sbjct: 211 NLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEIPGRR 270 Query: 281 GYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNR 340 GYP ++++L L ER G + KG++T + + + GD+ PI D I +G IV++R Sbjct: 271 GYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITEGQIVVSR 330 Query: 341 SLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDIR 390 L +G YPP++ L S+SRL + A ++ K VS + + E RD+R Sbjct: 331 ELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSD--QMYAGYAEGRDLR 382 >gi|240169504|ref|ZP_04748163.1| F0F1 ATP synthase subunit beta [Mycobacterium kansasii ATCC 12478] Length = 489 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 161/301 (53%), Gaps = 15/301 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMN--RQRVEKGFKTGIRVIDIFTPLC 159 G V NALG +D G G D + + PPA R E +TG++V+D+ TP Sbjct: 110 GHVFNALGNCLD---EPGYGADFEHWSIHRKPPAFEDLEPRTEM-LETGLKVVDLLTPYV 165 Query: 160 HGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215 G +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK Sbjct: 166 RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEANVLK 225 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSG 274 + +V DE P R L+A+T+AE+F + G +VLL +D+I RF + E++T G Sbjct: 226 DTALVFGQMDEPPGTRMRVALSALTMAEWFRDEAGQDVLLFIDNIFRFTQAGSEVSTLLG 285 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 286 RMPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDA 343 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 L+R++ +G +P VDPLAS S + D DE ++ + ++ R+++ +DI I Sbjct: 344 TTELSRAVFSKGIFPAVDPLASSSTILDPGVVGDEHYRVAQEVIRILQRYKDLQDIIAIL 403 Query: 394 G 394 G Sbjct: 404 G 404 >gi|183206560|gb|ACC54478.1| ATP synthase beta subunit [Symphyandra armena] Length = 471 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 32 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 91 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 92 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 148 Query: 163 RIGVFAGSGIGKSTL----LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L ++ A++ V + ER RE + ++ + Sbjct: 149 KIGLFGGAGVGKTVLIMELMNNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEK 207 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 208 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 267 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 268 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 325 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 326 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 385 Query: 389 IRLIGG 394 I I G Sbjct: 386 IITILG 391 >gi|190358735|sp|A9WNC8|ATPB_RENSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 484 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 94/293 (32%), Positives = 153/293 (52%), Gaps = 8/293 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG+P+D +S + I K P + + +TGI+ ID+ TP G Sbjct: 103 GHIFNVLGQPLDVAESEIQYTERWPIHRKPPSFDQLEGSTEMLETGIKSIDLLTPYIKGG 162 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEESGVLKDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 283 SAVGYQPNLADEMGLLQERITSTKGR--SITSMQAVYVPADDYTDPAPAATFAHLDATTE 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389 L+R +A G YP +DPL S SR+ D + D + ++ + +E +DI Sbjct: 341 LSREIASRGLYPAIDPLTSTSRILDPQYIGKDHYDTAVRVKQILQKNKELQDI 393 >gi|150024226|ref|YP_001295052.1| F0F1 ATP synthase subunit beta [Flavobacterium psychrophilum JIP02/86] gi|166201703|sp|A6GVV9|ATPB_FLAPJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|149770767|emb|CAL42232.1| ATP synthase beta subunit [Flavobacterium psychrophilum JIP02/86] Length = 503 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/330 (31%), Positives = 159/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG +L K GD M I + P + + TGI+VID+ P G Sbjct: 91 GRLFNVIGDAIDGLGNLPKDGDNGMSIHRQAPRFEDLSTSSEVLFTGIKVIDLIEPYSKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210 Query: 208 -----------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D G K+ V +E P R L+ ++IAEYF Sbjct: 211 DDFMHSMENGGWDLSKVDMPGMRESKATFVFGQMNEPPGARARVALSGLSIAEYFRDGAG 270 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 S +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + KG Sbjct: 271 SDQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTNKG 328 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPQI 388 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + ++ ++++ +DI I G Sbjct: 389 LGDEHYDCAQRVKEILQKYKQLQDIIAILG 418 >gi|119350459|gb|ABL63180.1| AtpB [Bulbochaete rectangularis var. hiloensis] Length = 392 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 156/307 (50%), Gaps = 20/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + + I P ++ F++GI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNMGPVNTEE-KLPIHRSAPAFVDLDTRLSIFESGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +ED Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIVEDN 157 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 158 LGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGCLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 S LD VL+R LA +G YP VDPLAS S + D + + R++E + Sbjct: 274 FSHLDATTVLSRGLAAKGIYPAVDPLASTSTMLQPWIVGDTHYNCAQKVKETLQRYKELQ 333 Query: 388 DIRLIGG 394 DI I G Sbjct: 334 DIIAILG 340 >gi|258690308|gb|ACV87916.1| ATP synthase beta subunit [Halichondria sp. KJP-2009] Length = 365 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 96/307 (31%), Positives = 156/307 (50%), Gaps = 21/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+ ID + K I ++ P + ++ TGI+V+D+ P G Sbjct: 32 GRIMNVIGEAIDERGPI-KTQTQAPIHAEAPEFIEMSTQQEILVTGIKVVDLLAPYAKGG 90 Query: 163 RIGVFAGSGIGKSTLLSMF------ARSDCFDKVIISLVGERGREVREFIEDY------- 209 +IG+F G+G+GK+ ++ A C + + VGER RE + + Sbjct: 91 KIGLFGGAGVGKTVVIMELINNVAHAHGGC---SVFAGVGERTREGNDLYHEMIQGGVIS 147 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LT +T+AEYF K G +VLL +D+I RF + E Sbjct: 148 LKDDSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSE 207 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ + ERI + KG+IT+V +V V D+ DP + Sbjct: 208 VSALLGRIPSAVGYQPTLATDMGSMQERI--TTTLKGSITSVQAVFVPADDLTDPAPATT 265 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEETR 387 + LD VL+R+++E G YP VDPL SR+ D +E V+ T ++ + + Sbjct: 266 FAHLDATTVLSRAISELGIYPAVDPLDPSSRIMDANIVGEEHYNVARGTQKILQDYRSLQ 325 Query: 388 DIRLIGG 394 DI I G Sbjct: 326 DIIAILG 332 >gi|119350547|gb|ABL63224.1| AtpB [Spermatozopsis similis] Length = 393 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 162/311 (52%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D ++G ++ ++ I K P ++ F+TGI+V+D+ P Sbjct: 38 LGRIFNVLGEPVD---NMGPVEVKETLPIHRKSPAFVDLDTRLSIFETGIKVVDLLAPYR 94 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 95 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 154 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 155 EKSLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQA 212 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 213 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 270 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W +K S+ + R+ Sbjct: 271 ATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGDKHYQGAQSVKRTLQRY 329 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 330 KELQDIIAILG 340 >gi|114769416|ref|ZP_01447042.1| F0F1 ATP synthase subunit beta [alpha proteobacterium HTCC2255] gi|114550333|gb|EAU53214.1| F0F1 ATP synthase subunit beta [alpha proteobacterium HTCC2255] Length = 477 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 162/310 (52%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N G+P+D LG K S I + P + + TGI+V+D+ P Sbjct: 89 LGRIMNVTGQPVD---ELGPVKTTTSRPIHGEAPLFEEQSTETEILVTGIKVVDLLAPYT 145 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED-- 208 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 146 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGLSVFAGVGERTREGNDLYHEMIESGV 203 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 + DN++ S +V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 204 IVPDNMEDSKIALVYGQMNEPPGARMRIALTGLTLAEQFRDESGSDVLFFVDNIFRFTQA 263 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + + G+IT+V +V V D+ DP Sbjct: 264 GAEVSALLGRIPSAVGYQPTLATDMGAMQERI--ASTKAGSITSVQAVYVPADDLTDPAP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+RS++E+G YP VDPL S SRL D +E + + + ++ R++ Sbjct: 322 ATSFAHLDATTVLDRSISEKGIYPAVDPLGSTSRLLDPLILGEEHYNVATDVQQILQRYK 381 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 382 SLQDIIAILG 391 >gi|88602473|ref|YP_502651.1| V-type ATP synthase subunit B [Methanospirillum hungatei JF-1] gi|121729141|sp|Q2FP51|VATB1_METHJ RecName: Full=V-type ATP synthase beta chain 1; AltName: Full=V-ATPase subunit B 1 gi|88187935|gb|ABD40932.1| Sodium-transporting two-sector ATPase [Methanospirillum hungatei JF-1] Length = 460 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 110/376 (29%), Positives = 186/376 (49%), Gaps = 36/376 (9%) Query: 42 YVCLGDFVVHQGKNSDNLGQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISP 97 Y L + V+ G S+ GQV+ + DIV + GIG++ + F ++ Sbjct: 25 YQELVNLVLADG--SEKRGQVLDTSDDIVVVQVFETTTGIGKDTGV---RFTGETIKMPV 79 Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+++ GKP DG + + +EI R + +TGI ID+ Sbjct: 80 GKDMLGRILSGAGKPKDGGPDIVP-EKRLEITGAAINPWARGSPRQFIQTGISTIDLTNT 138 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDY-L 210 L GQ++ +F+GSG+ + + AR SD V+ + +G E +F+ ++ Sbjct: 139 LVRGQKLPIFSGSGLPHNEIALQIARQAKVPGSDEQFAVVFAAMGITKEEENQFMAEFER 198 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269 L+ +VV + +D+ + R + P A+T AEY + + D +VL+IL +T + ++R+I Sbjct: 199 TGALEHAVVFLNLADDPAVERIITPRLALTTAEYLAFELDYHVLVILTDMTNYCEALRQI 258 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 E+P RGYP ++++L L ER G + +KG++T + + + GD+ PI D Sbjct: 259 GAAREEVPGRRGYPGYMYTDLASLYERAGIIKGKKGSVTQLSILTMPGDDITHPIPDLSG 318 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEE 385 I +G IV+NR L +G YPP++ L S+SRL + K ++ ++ K VS Sbjct: 319 YITEGQIVVNRDLHRKGIYPPINVLPSLSRLMNLGIGKGFTREDHKKVSD---------- 368 Query: 386 TRDIRLIGGYRPGVDL 401 +L GY GVDL Sbjct: 369 ----QLYAGYAEGVDL 380 >gi|326479862|gb|EGE03872.1| ATP synthase subunit beta [Trichophyton equinum CBS 127.97] Length = 520 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + KG I ++ P + + + TGI+V+D+ P G Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARG 190 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 367 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDI 427 Query: 390 RLIGG 394 I G Sbjct: 428 IAILG 432 >gi|317404545|gb|EFV84952.1| ATP synthase subunit beta [Achromobacter xylosoxidans C54] Length = 466 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + D I P + +TGI+VID+ P G Sbjct: 91 GRIMDVLGRPIDEAGEI-QHDEKRGIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGG 149 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 269 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ + + R++E RDI I G Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILG 384 >gi|300781408|ref|ZP_07091262.1| ATP synthase F1 sector beta subunit [Corynebacterium genitalium ATCC 33030] gi|300533115|gb|EFK54176.1| ATP synthase F1 sector beta subunit [Corynebacterium genitalium ATCC 33030] Length = 507 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 162/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG+ +D D S+GK I + P + + + +TGI+VID+ TP G Sbjct: 129 GHVFNALGECLD-DPSVGKDGDRWGIHREPPEFKDLEGKTEILETGIKVIDLLTPYVKGG 187 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L + Sbjct: 188 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEDMGVLPDTA 247 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 248 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 307 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 308 SAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATTE 365 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L+RS+A +G YP VDPL S SR+ + + V+ + +++ + +E +DI I G Sbjct: 366 LSRSIASKGIYPAVDPLTSTSRILEPGIVGERHYGVAQKVINILQKNKELQDIIAILG 423 >gi|225012364|ref|ZP_03702800.1| ATP synthase F1, beta subunit [Flavobacteria bacterium MS024-2A] gi|225003341|gb|EEG41315.1| ATP synthase F1, beta subunit [Flavobacteria bacterium MS024-2A] Length = 524 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 104/330 (31%), Positives = 161/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG + L K + + I P + + TGI+VID+ P G Sbjct: 112 GRLFNVIGDAIDGMEDLPKENENGLPIHRDAPAFEDLSTSTEVLFTGIKVIDLIEPYAKG 171 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 172 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 231 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 232 DDFMHSMEEGGWDLTKVDKAAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 291 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 292 DGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 349 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 350 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTAEI 409 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + K ++ L+ R++E +DI I G Sbjct: 410 LGEEHYKCAQNVKELLQRYKELQDIIAILG 439 >gi|313622362|gb|EFR92837.1| ATP synthase F1, beta subunit [Listeria innocua FSL J1-023] Length = 346 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 +TGI+V+D+ P G +IG+F G+G+GK+ L+ + + IS+ VGER RE Sbjct: 8 LETGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELIHNIAQEHGGISVFAGVGERTRE 67 Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 + + E ++K+ +V +E P R LT +TIAEYF + +VLL +D+I Sbjct: 68 GNDLYFEMKDSGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNI 127 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +E+ +L ERI + G++T++ ++ V D+ Sbjct: 128 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTNVGSVTSIQAIYVPADD 185 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L R L E+G YP VDPLAS SR L+ + ++ + + Sbjct: 186 YTDPAPATTFAHLDATTNLERKLTEQGIYPAVDPLASTSRALSPDIVGEEHYEVATEVQR 245 Query: 379 LIHRFEETRDIRLIGG 394 L+ R++E +DI I G Sbjct: 246 LLQRYKELQDIIAILG 261 >gi|313199631|ref|YP_004021247.1| ATP synthase CF1 beta subunit [Isoetes flaccida] gi|291575360|gb|ADE18073.1| ATP synthase CF1 beta subunit [Isoetes flaccida] Length = 493 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D S+ + I P F+TGI+V+D+ P Sbjct: 103 ATLGRIFNVLGEPVDNSGSV-DASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIN 221 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 K +V +ESP R LTA+T+AEYF +VLL +D+I RF + Sbjct: 222 EQNISESKVALVYGQMNESPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEQHYETAQGVKQTLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|91217251|ref|ZP_01254212.1| F0F1 ATP synthase subunit beta [Psychroflexus torquis ATCC 700755] gi|91184594|gb|EAS70976.1| F0F1 ATP synthase subunit beta [Psychroflexus torquis ATCC 700755] Length = 502 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 106/330 (32%), Positives = 158/330 (47%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G IDG L K G M I + P + + TGI+VID+ P G Sbjct: 90 GRLFNVTGDAIDGLGDLPKTGKDGMSIHREAPKFEDLAVSTEVLFTGIKVIDLIEPYSKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 208 -----------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D G K+ V +E P R L+ +TIAEYF Sbjct: 210 DDFMHSMEKGGWDLKKVDKAGMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 S+G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 270 ESQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + S LD VL+R +AE G YP VDPL S SR+ + Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRKIAELGIYPAVDPLDSTSRILTRDI 387 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D+ + L+ +++E +DI I G Sbjct: 388 LGDDHYDCAQKVKELLQKYKELQDIIAILG 417 >gi|183206490|gb|ACC54443.1| ATP synthase beta subunit [Campanula aucheri] Length = 491 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 45 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 104 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 105 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 161 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 162 KIGLFGGAGVGKTVLIMELINNIAKTHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 220 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 221 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 280 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 281 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 338 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 339 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 398 Query: 389 IRLIGG 394 I I G Sbjct: 399 IITILG 404 >gi|1171782|sp|Q08637|NTPB_ENTHR RecName: Full=V-type sodium ATPase subunit B; AltName: Full=Na(+)-translocating ATPase subunit B; AltName: Full=V-type sodium pump subunit B gi|391682|dbj|BAA02970.1| Na+ -ATPase beta subunit [Enterococcus hirae] gi|487279|dbj|BAA04276.1| Na+ -ATPase subunit B [Enterococcus hirae] Length = 458 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/323 (30%), Positives = 162/323 (50%), Gaps = 13/323 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ + D +V I G + + F ++ S GRV + LG+P D Sbjct: 42 GQVLEVQEDKAMVQIFEGTSGINLKNSSVRFLGHPLQLGVSEDMIGRVFDGLGRPKDNGP 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + + ++I +V + R ++ +TGI ID L GQ++ VF+GSG+ L Sbjct: 102 EI-LPEKYLDINGEVINPIARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKEL 160 Query: 178 LSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + AR SD F V+ + +G E F+ED+ + +SV+ + +++ I Sbjct: 161 AAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLANDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + KG +VL+I+ +T +A ++REI+ E+P RGYP +++ Sbjct: 220 ERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 L L ER G KG++T + + + D+ PI D I +G I+L R L + G Sbjct: 280 NLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGIQ 339 Query: 349 PPVDPLASVSRLADKAWSADEKK 371 PP+D L S+SRL DK A + + Sbjct: 340 PPIDVLPSLSRLKDKGTGAGKTR 362 >gi|183206668|gb|ACC54532.1| ATP synthase beta subunit [Asyneuma virgatum] Length = 488 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 104/312 (33%), Positives = 159/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGHDLYKEMKES 209 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 210 GVINEQKFVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 328 APATTFAHLDATTVLSRGLAAQGIYPAVDPLDSTSTMLQPLIVSDEHYKTAQSVKQTLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIITILG 399 >gi|86136463|ref|ZP_01055042.1| ATP synthase subunit B [Roseobacter sp. MED193] gi|85827337|gb|EAQ47533.1| ATP synthase subunit B [Roseobacter sp. MED193] Length = 474 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 161/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + + I P ++ + TGI+VID+ P Sbjct: 84 ATLGRILNVIGEPVDEKGPV-EATETRGIHGDAPAFADQSTATEILTTGIKVIDLLAPYT 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED-- 208 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGVSVFAGVGERTREGNDLYHEMIESGV 200 Query: 209 YLGDNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + +NL K +V +E P R L+ +T+AE F G +VL +D+I RF + Sbjct: 201 IVPENLVDSKIALVYGQMNEPPGARMRVALSGLTLAEQFRDDSGSDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI S + G+IT+V +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--SSTKNGSITSVQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384 + + LD VL+R+++E+G YP VDPL S SRL D +E V++ + ++ R++ Sbjct: 319 ATSFAHLDATTVLDRAISEKGIYPAVDPLGSTSRLLDPLIIGEEHYTVATDVQQILQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|326502400|dbj|BAJ95263.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326528609|dbj|BAJ97326.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 551 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 161/313 (51%), Gaps = 25/313 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+PID KGD+ + I + P + + ++ TGI+V+D+ Sbjct: 160 ATLGRIINVIGEPIDH-----KGDIKTNSYLPIHREAPAFVEQATEQQILVTGIKVVDLL 214 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + + + VGER RE RE IE Sbjct: 215 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIES 274 Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 L D +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF Sbjct: 275 GVIKLDDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 334 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ D Sbjct: 335 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 392 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381 P + + LD VL+R ++E G YP VDPL S SR L+ + + ++ Sbjct: 393 PAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGQEHYNTARGVQKVLQ 452 Query: 382 RFEETRDIRLIGG 394 ++ +DI I G Sbjct: 453 NYKNLQDIIAILG 465 >gi|312882261|ref|ZP_07742007.1| F0F1 ATP synthase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] gi|309370105|gb|EFP97611.1| F0F1 ATP synthase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] Length = 467 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 152/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G + S I + P + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGEIG-AEESYSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEN 204 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E + + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQQTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|183206494|gb|ACC54445.1| ATP synthase beta subunit [Campanula pelviformis] Length = 497 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 112/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104 K DNLGQ I + ++ V + + + G V G P GR Sbjct: 50 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLTVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IITILG 409 >gi|221132854|ref|XP_002156597.1| PREDICTED: similar to ATP synthase beta subunit [Hydra magnipapillata] Length = 534 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 160/305 (52%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + I ++ P + ++ TGI+V+D+ P G Sbjct: 149 GRIMNVIGEPIDERGPI-ITKTKAPIHAEAPAFVEMSVQQEILITGIKVVDLLAPYAKGG 207 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLG 211 +IG+F G+G+GK+ L+ + A++ V VGER RE EF+E L Sbjct: 208 KIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEFMETGVINLK 266 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 267 DKSSKVALVYGQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSEVS 326 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + + Sbjct: 327 ALLGRIPSAVGYQPTLATDMGTMQERI--TTTRKGSITSVQAIYVPADDLTDPAPATTFA 384 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD + VL+R +AE G YP VDPL S SR+ D + V+ S+ ++ ++ +DI Sbjct: 385 HLDANTVLSRGIAELGIYPAVDPLDSNSRILDPNIVGQKHYDVARSVQKILQDYKSLQDI 444 Query: 390 RLIGG 394 I G Sbjct: 445 IAILG 449 >gi|209965526|ref|YP_002298441.1| F0F1 ATP synthase subunit beta [Rhodospirillum centenum SW] gi|209958992|gb|ACI99628.1| ATP synthase F1, beta subunit [Rhodospirillum centenum SW] Length = 484 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 159/312 (50%), Gaps = 21/312 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N G+PID + K + + I P + + + TGI+VID+ P Sbjct: 91 ATLGRILNVTGEPIDERGPV-KAEKTYPIHRSAPEFIEQSTEAQILVTGIKVIDLLAPYL 149 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ L++ A++ V VGER RE + + + Sbjct: 150 KGGKIGLFGGAGVGKTVTIQELINNIAKAHGGVSVFAG-VGERTREGNDLYHEMIDSGVI 208 Query: 211 -----GDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 GD V +V +E P R L+ +TIAEYF +G +VL +D+I RF Sbjct: 209 KLNESGDTAGSKVALVYGQMNEPPGARARVGLSGLTIAEYFRDEEGQDVLFFVDNIFRFT 268 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ L ERI + +KG+IT+V +V V D+ DP Sbjct: 269 QAGAEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTKKGSITSVQAVYVPADDLTDP 326 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VLNR++AE+ +P VDPL S SR D +E K+ + ++ + Sbjct: 327 APATSFAHLDATTVLNRAIAEQAIFPAVDPLDSTSRALDPRIVGEEHYKVARDVQKVLQQ 386 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 387 YKSLQDIIAILG 398 >gi|91204911|ref|YP_537266.1| F0F1 ATP synthase subunit beta [Rickettsia bellii RML369-C] gi|118573738|sp|Q1RKD7|ATPB_RICBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|91068455|gb|ABE04177.1| ATP synthase beta chain [Rickettsia bellii RML369-C] Length = 473 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 96/307 (31%), Positives = 162/307 (52%), Gaps = 19/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N +G+PIDG + KG S+ + K P+ +Q ++ TGI+V+D+ P G Sbjct: 89 GRIMNVVGEPIDGKGKI-KGS-SISSIYKSAPSFTQQSTDRNILVTGIKVVDLLAPYTKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD---NLK 215 +IG+F G+G+GK+ L+ + + + VGER RE + + + NL+ Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVINLE 206 Query: 216 -----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LT +T+AE F ++G +VL +D+I RF + E Sbjct: 207 EPEKSKVALVYGQMNEPPGARARVALTGLTVAESFRDMNEGQDVLFFVDNIFRFTQAGSE 266 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP + Sbjct: 267 VSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADDLTDPAPATS 324 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD VL+R +AE G YP VDPL S S++ D +E V+ + ++ ++ + Sbjct: 325 FAHLDATTVLSRQIAELGIYPAVDPLDSTSQVLDPMIVGEEHYNVARKVQQILQTYKSLQ 384 Query: 388 DIRLIGG 394 DI I G Sbjct: 385 DIIAILG 391 >gi|163792320|ref|ZP_02186297.1| F1-ATP Synthase Beta Chain [alpha proteobacterium BAL199] gi|159182025|gb|EDP66534.1| F1-ATP Synthase Beta Chain [alpha proteobacterium BAL199] Length = 474 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 157/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G P+D + + L I P +++ + TGI+VID+ P G Sbjct: 87 LGRILNVIGDPVDERPPV-ETKLRFPIHRPAPAYIDQSTESEILITGIKVIDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + + Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMVESGVIVP 204 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 K+ +V +E P R LT +T+AEYF +G +VL +D+I RF + E+ Sbjct: 205 DGPGSKAALVYGQMNEPPGARARVGLTGLTLAEYFRDEEGQDVLFFVDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 265 SALLGRMPSAVGYQPTLATDMGALQERI--TTTKKGSITSVQAIYVPADDLTDPAPATSF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D DE + + ++ ++ +D Sbjct: 323 AHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYNIARRVQEVLQQYRSLQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|327300803|ref|XP_003235094.1| ATP synthase subunit beta [Trichophyton rubrum CBS 118892] gi|326462446|gb|EGD87899.1| ATP synthase subunit beta [Trichophyton rubrum CBS 118892] Length = 520 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + KG I ++ P + + + TGI+V+D+ P G Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARG 190 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 367 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDI 427 Query: 390 RLIGG 394 I G Sbjct: 428 IAILG 432 >gi|258690454|gb|ACV87989.1| ATP synthase beta subunit [Aplysina fulva] Length = 363 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 159/307 (51%), Gaps = 19/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID + + I + P + ++ +TGI+V+D+ P G Sbjct: 31 LGRIINVIGEPIDERGPVNAKE-HFGIHQEAPEFVEMSVEQEILETGIKVVDLLAPYAKG 89 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE D Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIDL 148 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 G K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 149 KGKGSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDVEGQDVLLFIDNIFRFTQAGSE 207 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 208 VSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATT 265 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R +AE G YP VDPL S SR+ D E + + ++ ++ + Sbjct: 266 FAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNIVGHEHYNIARGVQKILQDYKSLQ 325 Query: 388 DIRLIGG 394 DI I G Sbjct: 326 DIIAILG 332 >gi|28899843|ref|NP_799448.1| F0F1 ATP synthase subunit beta [Vibrio parahaemolyticus RIMD 2210633] gi|260361991|ref|ZP_05774996.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus K5030] gi|260876522|ref|ZP_05888877.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AN-5034] gi|260897421|ref|ZP_05905917.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus Peru-466] gi|260901306|ref|ZP_05909701.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ4037] gi|81839718|sp|Q87KA8|ATPB_VIBPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|28808095|dbj|BAC61332.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus RIMD 2210633] gi|308087912|gb|EFO37607.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus Peru-466] gi|308090432|gb|EFO40127.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AN-5034] gi|308109863|gb|EFO47403.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ4037] gi|308114172|gb|EFO51712.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus K5030] gi|328471195|gb|EGF42097.1| F0F1 ATP synthase subunit beta [Vibrio parahaemolyticus 10329] Length = 467 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 GR++N LG ID +G ++ + + P+ Q E +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGEIGAEEVYS--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVE 203 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 204 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + + Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389 LD +VLNR++A G YP +DPL S SR D D + + + R++E +DI Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQDHYDIARGVQQTLQRYKELKDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|315048499|ref|XP_003173624.1| ATP synthase subunit beta [Arthroderma gypseum CBS 118893] gi|311341591|gb|EFR00794.1| ATP synthase subunit beta [Arthroderma gypseum CBS 118893] Length = 520 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + KG I ++ P + + + TGI+V+D+ P G Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARG 190 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 367 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDI 427 Query: 390 RLIGG 394 I G Sbjct: 428 IAILG 432 >gi|284999813|dbj|BAI67807.1| ATP synthase beta-subunit [Chloromonas augustae] Length = 376 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 160/313 (51%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVD---NLGPVKAEAALPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AE+F +VL +D+I RF Sbjct: 146 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEFFRDFNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGNLQERI--TSTKEGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 + LD VL+R+LA +G YP VDPL S S + + W EK + + + Sbjct: 262 APAVTFTHLDATTVLSRNLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGVAQDVKKTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E DI I G Sbjct: 321 RYKELTDIIAILG 333 >gi|302880125|ref|YP_003848689.1| ATP synthase F1, beta subunit [Gallionella capsiferriformans ES-2] gi|302582914|gb|ADL56925.1| ATP synthase F1, beta subunit [Gallionella capsiferriformans ES-2] Length = 465 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 102/306 (33%), Positives = 155/306 (50%), Gaps = 18/306 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDI 154 A GR+++ LG+PID G++ E I K P +TGI+VID+ Sbjct: 87 AGTLGRIMDVLGRPIDD-----AGEIPCEERRPIHQKAPKFDELSPSVDLLETGIKVIDL 141 Query: 155 FTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 P G ++G+F G+G+GK+ L++ A+ V VGER RE +F + Sbjct: 142 VCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMK 200 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 N L K +V +E P R LT +T+AE F +G ++L +D+I R+ + E+ Sbjct: 201 DSNVLDKVSMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEV 260 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ E+ RL ERI + + G+IT+V +V V D+ DP + Sbjct: 261 SALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSVQAVYVPADDLTDPAPATTF 318 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 LD +VL+R +A G YP VDPL S SR D +E V+ + + R++E RD Sbjct: 319 LHLDSTVVLSRDIASLGIYPAVDPLDSSSRQLDPLVVGEEHYSVARRVQQNLQRYKELRD 378 Query: 389 IRLIGG 394 I I G Sbjct: 379 IIAILG 384 >gi|21956144|dbj|BAC06432.1| ATP synthase beta-subunit [Gonium viridistellatum] Length = 376 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVVVSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|124806537|ref|XP_001350751.1| ATP synthase beta chain, mitochondrial precursor, putative [Plasmodium falciparum 3D7] gi|23496878|gb|AAN36431.1|AE014849_50 ATP synthase beta chain, mitochondrial precursor, putative [Plasmodium falciparum 3D7] Length = 535 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 103/315 (32%), Positives = 163/315 (51%), Gaps = 29/315 (9%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDIFTPLCH 160 GR++N +G+PID + K L + + PP Q E TGI+V+D+ P Sbjct: 141 GRIMNVIGEPIDECGHINHKKTLPIH---RDPPLFTDQSTEPALLITGIKVVDLIAPYAK 197 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYL------ 210 G +IG+F G+G+GK T+L M ++ K + + VGER RE + + + Sbjct: 198 GGKIGLFGGAGVGK-TVLIMELINNVAKKHGGYSVFAGVGERTREGNDLYHEMITTGVIK 256 Query: 211 ----GDNL-----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 G+N K+ +V +E P R LT +T+AEYF + +VLL +D+I Sbjct: 257 KKKIGNNEFDFNGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEENQDVLLFIDNIY 316 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ ++L L ERI + + G+IT+V +V V D+ Sbjct: 317 RFTQAGSEVSALLGRIPSAVGYQPTLATDLGALQERI--TTTKNGSITSVQAVYVPADDL 374 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHL 379 DP + S LD VL+RS+AE G YP VDPL S SR L A++ ++ ++ + Sbjct: 375 TDPAPATTFSHLDATTVLSRSIAELGIYPAVDPLDSTSRMLTPDIVGAEQYQVARNVQQI 434 Query: 380 IHRFEETRDIRLIGG 394 + ++ +DI I G Sbjct: 435 LQDYKSLQDIIAILG 449 >gi|297570967|ref|YP_003696741.1| ATP synthase F1 subunit beta [Arcanobacterium haemolyticum DSM 20595] gi|296931314|gb|ADH92122.1| ATP synthase F1, beta subunit [Arcanobacterium haemolyticum DSM 20595] Length = 486 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 157/299 (52%), Gaps = 19/299 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ LG+G+ ++++ + P P + E K F+TGI+VID+ T Sbjct: 104 GHVFNVTGDVLN----LGEGE-TLDVKERWPIHRKAPQFDELEPETKMFETGIKVIDLLT 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + D +S+ VGER RE + I + Sbjct: 159 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIHEMEDAG 218 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 L K+ +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T Sbjct: 219 VLDKTALVFGQMDEPPGVRLRIALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVST 278 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + Sbjct: 279 LLGRMPSAVGYQPTLADEMGALQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAH 336 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD L+R +A G YP VDPL S SR+ D + + + ++ + +E +DI Sbjct: 337 LDATTELSRDIASRGLYPAVDPLTSTSRILDAQYVGQAHYDTATKVKSILQKNKELQDI 395 >gi|148652009|ref|YP_001279102.1| F0F1 ATP synthase subunit beta [Psychrobacter sp. PRwf-1] gi|172048450|sp|A5WBW1|ATPB_PSYWF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|148571093|gb|ABQ93152.1| ATP synthase F1, beta subunit [Psychrobacter sp. PRwf-1] Length = 475 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 158/316 (50%), Gaps = 27/316 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + D I + P + +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGRPIDEQGPVNSED-KWSIHRQAPSYDEQANSTDLLETGIKVIDLLCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------- 205 G ++G+F G+G+GK+ + + +S+ VGER RE +F Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEAGVVD 199 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSI 259 +E++ K +V +E P R LT +T+AEYF + KG +VLL +D+I Sbjct: 200 VENFTN---SKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGKDVLLFVDNI 256 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 R+ + E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ Sbjct: 257 YRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSIQAVYVPADD 314 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DP + + LD +VL+R +A +G YP +DPL S SR D +E V+ + Sbjct: 315 LTDPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVIGEEHYNVARGVQE 374 Query: 379 LIHRFEETRDIRLIGG 394 ++ R++E +DI I G Sbjct: 375 VLQRYKELKDIIAILG 390 >gi|218147|dbj|BAA01372.1| mitochondrial F1-ATPase beta subunit [Oryza sativa Japonica Group] Length = 551 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 164/314 (52%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+PID KGD++ + I + P + + ++ TGI+V+D+ Sbjct: 159 ATLGRIMNVIGEPIDE-----KGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLV 213 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 214 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 272 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+A +F ++G +VLL +D+I R Sbjct: 273 SGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAVHFRDAEGQDVLLFIDNIFR 332 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 333 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 390 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 391 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTARGVQRVL 450 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 451 QNYKNLQDIIAILG 464 >gi|165933793|ref|YP_001650582.1| F0F1 ATP synthase subunit beta [Rickettsia rickettsii str. Iowa] gi|165908880|gb|ABY73176.1| ATP synthase beta chain [Rickettsia rickettsii str. Iowa] Length = 499 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 159/316 (50%), Gaps = 19/316 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVI 152 RI GR++N +G+PIDG + ++S + K P Q E+ TGI+VI Sbjct: 106 RIPVGTETLGRIMNVVGEPIDGKGDIKSSNISS--IYKPAPDFTNQSTERNILVTGIKVI 163 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + + Sbjct: 164 DLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEM 223 Query: 210 LGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSI 259 + + K +V +E P R L+ +TIAE F ++G +VL +D+I Sbjct: 224 IDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNI 283 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ Sbjct: 284 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADD 341 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ + Sbjct: 342 LTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQ 401 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 402 VLQTYKSLQDIITILG 417 >gi|172037726|ref|YP_001804227.1| F0F1 ATP synthase subunit beta [Cyanothece sp. ATCC 51142] gi|171699180|gb|ACB52161.1| ATP synthase F1, beta subunit [Cyanothece sp. ATCC 51142] Length = 483 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 104/323 (32%), Positives = 163/323 (50%), Gaps = 16/323 (4%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG 144 D+V + GR+ N LG+P+D +G + S I P K Sbjct: 80 DIVDTGAPISVPVGKATLGRIFNVLGEPVDEMGDVGNEE-SSPIHRPAPKLTELSTKPKV 138 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGRE 201 F+TGI+VID+ TP G +IG+F G+G+GK+ ++ + +S+ G ER RE Sbjct: 139 FETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTRE 198 Query: 202 ----VREFIEDYL--GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252 E IE + DNL +S +V +E P R L+A+T+AEYF +V Sbjct: 199 GNDLYNEMIESKVINPDNLSESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDV 258 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LL +D+I RF + E++ G +P A GY ++ +++ L ERI + ++G+IT++ + Sbjct: 259 LLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQA 316 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371 V V D+ DP + + LDG VL+R+LA +G YP VDPL S S + E Sbjct: 317 VYVPADDLTDPAPATTFAHLDGTTVLSRALASKGIYPAVDPLDSTSTMLQPNIVGQEHYD 376 Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394 ++ + R++E +DI I G Sbjct: 377 TARAVQSTLQRYKELQDIIAILG 399 >gi|4519314|dbj|BAA75572.1| ATP synthase beta-subunit [Gonium quadratum] Length = 376 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVVVSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVER 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 QLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|183206552|gb|ACC54474.1| ATP synthase beta subunit [Campanula medium] Length = 471 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 32 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 91 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 92 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 148 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 149 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 207 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 208 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 267 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 268 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 325 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 326 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 385 Query: 389 IRLIGG 394 I I G Sbjct: 386 IITILG 391 >gi|297192040|ref|ZP_06909438.1| F0F1 ATP synthase subunit beta [Streptomyces pristinaespiralis ATCC 25486] gi|197719510|gb|EDY63418.1| F0F1 ATP synthase subunit beta [Streptomyces pristinaespiralis ATCC 25486] Length = 480 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/327 (29%), Positives = 171/327 (52%), Gaps = 15/327 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ + I K P + + F+TG++VID+ TP G Sbjct: 101 GKVFNTLGEVLNVPEENANIGERWPIHRKAPNFDQLESKTEMFETGVKVIDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + IE+ + K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIEEMSESGVIDKTA 220 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I R+ + E++T G +P Sbjct: 221 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRYTQAGSEVSTLLGRMP 280 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 281 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYR 396 L+R ++E+G YP VDPL S SR+ D + E + + ++ ++++ +DI I Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYITQEHYDAATRVKGILQKYKDLQDIIAI---- 394 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ VH+ + FL Q+ Sbjct: 395 LGIDELGEEDKLVVHRARRVERFLSQN 421 >gi|183206602|gb|ACC54499.1| ATP synthase beta subunit [Prismatocarpus schlechteri] Length = 480 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 201 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 202 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 261 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 319 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 379 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 380 YKELQDIITILG 391 >gi|183206576|gb|ACC54486.1| ATP synthase beta subunit [Campanula rumeliana] Length = 475 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 32 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 91 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 92 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 148 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 149 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 207 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 208 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 267 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 268 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 325 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 326 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 385 Query: 389 IRLIGG 394 I I G Sbjct: 386 IITILG 391 >gi|226370|prf||1508208A ATPase beta Length = 499 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 107/354 (30%), Positives = 169/354 (47%), Gaps = 41/354 (11%) Query: 79 EEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN 137 E + G V G+ P+ GR+ N G PIDG ++ K + I +K P N Sbjct: 62 EGLVRGMAVIDTGKGTTMPTGEAIKGRLFNVTGDPIDGLPAVSK-EGGRAIHAKPPAFEN 120 Query: 138 RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISL 194 + TGI+VID+ P G +IG+F G+G+GK+ L+ + + + + + Sbjct: 121 LSTASEVLYTGIKVIDLIEPYAKGGKIGLFGGAGVGKTVLIQELINNIAKAYSGLSVFAG 180 Query: 195 VGERGRE----VREFIEDYL---GDNLK---------------------KSVVVVATSDE 226 VGER RE +RE IE + G+ K K+ V +E Sbjct: 181 VGERTREGNDLMREMIEAGIMKYGEGFKHSMEEGGWDLSKVDMNELADSKATFVFGQMNE 240 Query: 227 SPILRKMAPLTAVTIAEYF-----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARG 281 P R L+ +TIAEY+ KG ++L +D+I RF + E++ G +P A G Sbjct: 241 PPGARARVALSGLTIAEYYRDGDGQGKGRDILFFVDNIFRFTQAGSEVSALLGRMPSAVG 300 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 Y ++ +E+ + ERI + + G+IT+V +V V D+ DP + + LD VL+R Sbjct: 301 YQPTLATEMGLMQERI--TSTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRK 358 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +A+ G YP VDPL S SR+ D L + + ++ R++E +DI I G Sbjct: 359 IADLGIYPAVDPLDSTSRILSPQVVGDAHYNLANRVKVMLQRYKELQDIIAILG 412 >gi|183206556|gb|ACC54476.1| ATP synthase beta subunit [Campanula bononiensis] Length = 479 Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 31 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 90 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 91 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 147 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 148 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 206 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 207 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 266 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 267 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 324 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 325 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 384 Query: 389 IRLIGG 394 I I G Sbjct: 385 IITILG 390 >gi|116328613|ref|YP_798333.1| F0F1 ATP synthase subunit beta [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331342|ref|YP_801060.1| F0F1 ATP synthase subunit beta [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122280912|sp|Q04S18|ATPB_LEPBJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|122283600|sp|Q04ZU5|ATPB_LEPBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116121357|gb|ABJ79400.1| Beta subunit of the H(+)-transporting two-sector ATPase, F1 sector [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125031|gb|ABJ76302.1| Beta subunit of the H(+)-transporting two-sector ATPase, F1 sector [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 467 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/304 (32%), Positives = 162/304 (53%), Gaps = 15/304 (4%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LGK ID ++ + + I P + F+TGI+VID+ P Sbjct: 87 ATLGRIFNVLGKTIDEGPAITVKE-TRPIHRPAPAFDELTSKTEVFETGIKVIDLLAPYI 145 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYLGD 212 G + G+F G+G+GK+ L+ + + + VGER RE RE E + D Sbjct: 146 KGGKTGLFGGAGVGKTVLIQELINNIAKQHGGFSVFAGVGERTREGNDLWREMKESGVID 205 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 K+V+ +E P R L+A+T+AE+F S G +VLL +D+I RF+ + E++ Sbjct: 206 ---KTVLCYGQMNEPPGARLRVALSALTMAEHFRDSIGTDVLLFVDNIFRFSQAGSEVSA 262 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +E+ L ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 263 LLGRMPSAVGYQPTLSTEMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPANAFAH 320 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD VL+R+++++G YP VDPL S SR+ + +E V+ + ++ R+++ +DI Sbjct: 321 LDATTVLSRAISDKGIYPAVDPLDSTSRVMNAQVLGEEHYTVAREVQRILQRYKDLQDII 380 Query: 391 LIGG 394 I G Sbjct: 381 AILG 384 >gi|254432370|ref|ZP_05046073.1| ATP synthase F1, beta subunit [Cyanobium sp. PCC 7001] gi|197626823|gb|EDY39382.1| ATP synthase F1, beta subunit [Cyanobium sp. PCC 7001] Length = 486 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + +L+ I P + + F+TGI+VID+ P Sbjct: 95 ATLGRIFNVLGEPVDEQGPVST-NLTAPIHRAAPKLTELETKPRVFETGIKVIDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 154 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 213 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 214 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + A DE + ++ + R++E Sbjct: 332 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|139439333|ref|ZP_01772775.1| Hypothetical protein COLAER_01791 [Collinsella aerofaciens ATCC 25986] gi|133775357|gb|EBA39177.1| Hypothetical protein COLAER_01791 [Collinsella aerofaciens ATCC 25986] Length = 484 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 168/327 (51%), Gaps = 15/327 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +GKP+DG + + + I P + F+TGI+ +D+ P G Sbjct: 106 LGRIWNVMGKPVDGK-PMPEVEEFYPIHHAAPRFDELTTKTEIFETGIKAVDLLEPYIRG 164 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVRE-FIEDYLGDNLKKS 217 + G+F G+G+GK+ L+ + + + + VGER RE + F+E + K+ Sbjct: 165 GKTGLFGGAGVGKTVLIQELINNLAQEHGGTSVFTGVGERTREGTDLFLEMSESGVIDKT 224 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L +T AEYF +G +VLL +D+I RF+ + E++ G +P Sbjct: 225 CLVYGQMNEPPGARLRIGLAGLTTAEYFRDRGQDVLLFIDNIFRFSQAGSEVSALLGRMP 284 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + + LD V Sbjct: 285 SAVGYQPTLATEMGDLQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFTHLDATTV 342 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGYR 396 L+RS++ G +P +DPLAS S D + +E V+ + L+ + + +DI I Sbjct: 343 LSRSISSLGLFPAIDPLASSSDALDPSIVGEEHYRVAVKVQELLQEYSDLQDIIAI---- 398 Query: 397 PGVDLILDK---AVHQVPIIYDFLKQS 420 G+D + ++ V++ I FL QS Sbjct: 399 LGMDELSEEQRLTVNRARKIQQFLSQS 425 >gi|91178108|gb|ABE27289.1| mitochondrial F-ATPase beta subunit [Candida famata] Length = 337 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 162/308 (52%), Gaps = 22/308 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR++N +G+PID + + + + PPA Q + + +TGI+V+D+ P Sbjct: 19 LGRILNVIGEPIDEQGPVDAKE--TRPIHQDPPAFVDQSTKAEVLETGIKVVDLLAPYAR 76 Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE----D 208 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E + Sbjct: 77 GGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYREMKETGVIN 135 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 136 LEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGS 193 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + KG++T+V +V V D+ DP + Sbjct: 194 EVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTTKGSVTSVQAVYVPADDLTDPAPAT 251 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R ++E G YP VDPL S SRL D E ++ + + + ++ Sbjct: 252 TFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDADIVGKEHYEVATGVQQTLQAYKSL 311 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 312 QDIIAILG 319 >gi|255326276|ref|ZP_05367362.1| ATP synthase F1, beta subunit [Rothia mucilaginosa ATCC 25296] gi|255296730|gb|EET76061.1| ATP synthase F1, beta subunit [Rothia mucilaginosa ATCC 25296] Length = 487 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 90/272 (33%), Positives = 141/272 (51%), Gaps = 7/272 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG +D +S K D I P + + +TGI+ ID+ TP G Sbjct: 104 GHIFNVLGDALDVPNSEIKADTYWPIHRAAPGFAELEGSTEMLETGIKSIDLLTPYIKGG 163 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 164 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFTGVGERTREGNDLWVEMEEAGVLKDTA 223 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R LT +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 224 LVFGQMDEPPGTRLRVALTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 283 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 284 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATTE 341 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 L+R +A G YP +DPL+S SR+ D + E Sbjct: 342 LSREIASRGLYPAIDPLSSTSRILDAQYIGQE 373 >gi|183206686|gb|ACC54541.1| ATP synthase beta subunit [Campanula jacquinii] Length = 498 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 50 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IITILG 409 >gi|110636759|ref|YP_676966.1| F0F1 ATP synthase subunit beta [Cytophaga hutchinsonii ATCC 33406] gi|123059035|sp|Q11Y90|ATPB_CYTH3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|110279440|gb|ABG57626.1| ATP synthase F1 subcomplex beta subunit [Cytophaga hutchinsonii ATCC 33406] Length = 501 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 109/357 (30%), Positives = 173/357 (48%), Gaps = 47/357 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G IDG S G M I + P + + TGI+VID+ P G Sbjct: 89 GRLYNVVGDAIDGIPS-GVAANRMSIHRQAPKFEDLSTNTEVLFTGIKVIDLLEPYVKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE IE + GD Sbjct: 148 KIGLFGGAGVGKTVLIMELINNIAKAYAGLSVFAGVGERTREGNDLLREMIESNVIRYGD 207 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-----S 246 K S+ +V +E P R L +T+AEYF Sbjct: 208 EFKHSMEKGEWDLSKVDATELLKSQATLVFGQMNEPPGARARVALAGLTVAEYFRDGDGQ 267 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G+ Sbjct: 268 GQGRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRGS 325 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365 IT+V +V V D+ DP + + LD VLNR ++E G YP VDPL S SR L+ + Sbjct: 326 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLNRKISELGIYPAVDPLDSTSRILSPEIL 385 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419 ++ + ++ R++E +DI I G+D + + +AVH+ + FL Q Sbjct: 386 GSEHYDCAQRVKEILQRYKELQDIIAI----LGMDELSEEDKQAVHRARRVQRFLSQ 438 >gi|218767495|ref|YP_002342007.1| F0F1 ATP synthase subunit beta [Neisseria meningitidis Z2491] gi|81857515|sp|Q9JW70|ATPB_NEIMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|121051503|emb|CAM07796.1| ATP synthase beta chain [Neisseria meningitidis Z2491] Length = 465 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 154/304 (50%), Gaps = 16/304 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG P+D + D S I P + +TGI+VID+ P G Sbjct: 84 GRIVDVLGTPVDEAGPIDT-DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGG 142 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A++ V VGER RE +F + N L K Sbjct: 143 KVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 201 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITRFAHSIREIAT 271 +V +E P R LT +T+AEYF + KG +VL +D+I R+ + E++ Sbjct: 202 AMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSA 261 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 262 LLGRMPSAVGYQPTLAEEMGCLQERI--TSTQTGSITSIQAVYVPADDLTDPSPATTFAH 319 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VL+R +A G YP VDPL S SR D E V+ + + +++E RDI Sbjct: 320 LDATVVLSRDIASLGIYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDII 379 Query: 391 LIGG 394 I G Sbjct: 380 AILG 383 >gi|257095876|ref|YP_003169517.1| ATP synthase F1 subunit beta [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048400|gb|ACV37588.1| ATP synthase F1, beta subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 466 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+PID + + EI P +TGI+VID+ P G Sbjct: 92 GRIMNVLGRPIDEAGPIATEE-RREIHQLAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKESNVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F G ++L +D+I R+ + E++ G +P Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDDGRDILFFVDNIYRYTLAGTEVSALLGRMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 270 SAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ + + +++E RDI I G Sbjct: 328 LSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYGVARAVQMTLQKYKELRDIIAILG 385 >gi|183206550|gb|ACC54473.1| ATP synthase beta subunit [Campanula latifolia] Length = 475 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 37 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 96 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 97 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 153 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 212 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 213 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 272 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 273 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 330 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 331 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 390 Query: 389 IRLIGG 394 I I G Sbjct: 391 IITILG 396 >gi|115401284|ref|XP_001216230.1| ATP synthase beta chain, mitochondrial precursor [Aspergillus terreus NIH2624] gi|114190171|gb|EAU31871.1| ATP synthase beta chain, mitochondrial precursor [Aspergillus terreus NIH2624] Length = 500 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 16/304 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PID + K + I ++ PP + + TGI+V+D+ P G Sbjct: 128 GRILNVTGDPIDERGPV-KATTYLPIHTEAPPFTEQSTEAEILVTGIKVVDLLAPYARGG 186 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 +IG+F G+G+GK+ L++ A++ V VGER RE + + D Sbjct: 187 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFCG-VGERTREGNDLYHEMQETGVIQLD 245 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 246 GESKVSLVFGQMNEPPGARARVALTGLTIAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSA 305 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 306 LLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFAH 363 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD VL+R ++E G YP VDPL S SR+ D E + + ++ ++ +DI Sbjct: 364 LDATTVLSRGISELGIYPAVDPLDSKSRMLDARIVGQEHYDTATRVQQMLQEYKSLQDII 423 Query: 391 LIGG 394 I G Sbjct: 424 AILG 427 >gi|300770997|ref|ZP_07080874.1| ATP synthase F1 sector beta subunit [Sphingobacterium spiritivorum ATCC 33861] gi|300762270|gb|EFK59089.1| ATP synthase F1 sector beta subunit [Sphingobacterium spiritivorum ATCC 33861] Length = 500 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 110/358 (30%), Positives = 171/358 (47%), Gaps = 49/358 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GRV N +G IDG +L K + + VPP E TGI+VID+ P G Sbjct: 89 GRVFNVVGDAIDGIKNLDK--TNGRPIHNVPPKFEDLSTESEVLFTGIKVIDLLEPYAKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 206 Query: 208 DYLGDNLKKS-----------------VVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ + ++K V +E P R L+ +T+AEYF Sbjct: 207 DHFMEGMEKGEWPLETVDQELMKESKCTFVFGQMNEPPGARARVALSGLTVAEYFRDGEG 266 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + + G Sbjct: 267 DGQGKDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTKNG 324 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ A Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILSPAV 384 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419 DE + ++ R++E +DI I G+D + + + VH+ + FL Q Sbjct: 385 LGDEHYNTAQRVKEILQRYKELQDIIAI----LGMDELSEEDKQTVHRARRVQRFLSQ 438 >gi|183206590|gb|ACC54493.1| ATP synthase beta subunit [Campanula erinus] Length = 498 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 50 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 226 KFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IITILG 409 >gi|217965808|ref|YP_002351486.1| ATP synthase F1, beta subunit [Listeria monocytogenes HCC23] gi|217335078|gb|ACK40872.1| ATP synthase F1, beta subunit [Listeria monocytogenes HCC23] gi|307569648|emb|CAR82827.1| ATP synthase F1, beta subunit [Listeria monocytogenes L99] Length = 456 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 30/404 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN + + IGE L G V + G + G Sbjct: 33 EYETHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGAEVVNLGHPIEVPVGETVQG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG + + I + P ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGLPE-PEAKVKWPIFREQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215 G+F G+G+GKS L+ SM + F V GER RE + + E L Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMMGGNSVFTGV-----GERVREGIGLYKELESSGVLP 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ++P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 IVL RS+A G +P V+PL S SR + + + +L + ++ R+ E ++I + Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433 G D K VH+ I +FL Q S +E +F EI Sbjct: 381 GMAELSDED-KKLVHRARKIRNFLSQPFYVSEKFTGTEGIFVEI 423 >gi|190358738|sp|Q0RDB4|ATPB_FRAAA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 479 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V N LG P+D D + I + P + + F TGI+VID+ P G Sbjct: 105 GHVFNVLGTPLDVDKV--DAETRWSIHRQAPAFDQLESKTEMFTTGIKVIDLLAPYVRGG 162 Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ ++ R + F V + + VGER RE + F+E ++ + Sbjct: 163 KIGLFGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVIEDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRLRVALGALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 283 SAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDAQTV 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+++ G YP V PL S SR+ D + E + ++ R+++ +DI I G Sbjct: 341 LDRSISDLGIYPAVSPLDSNSRILDARYLGQEHYDTAREVQRILQRYKDLQDIIAILG 398 >gi|118573739|sp|Q4UK18|ATPB_RICFE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 474 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 25/319 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149 RI GR++N +G+PIDG KGD+ +S K P Q E+ TGI Sbjct: 80 RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKSAPDFTNQSTERNILVTGI 134 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206 +V+D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 135 KVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194 Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256 + + + K +V +E P R L+ +TIAE F ++G +VL + Sbjct: 195 HEMIDSGVIDLEKPENSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKNGSITSVQAIYVP 312 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 373 VQQILQTYKSLQDIIAILG 391 >gi|298674215|ref|YP_003725965.1| ATP synthase subunit B [Methanohalobium evestigatum Z-7303] gi|298287203|gb|ADI73169.1| ATP synthase, B subunit [Methanohalobium evestigatum Z-7303] Length = 475 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 112/391 (28%), Positives = 193/391 (49%), Gaps = 38/391 (9%) Query: 29 ITSVYYTVTCLS---------QYVCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPV-GI 77 +T Y T+T +S + V G+ V ++ S GQV+ + D V + G Sbjct: 1 MTKEYKTITQISGPLIFLEKTEPVGYGELVQINTEDGSTKRGQVLDTSGDTVVVQVFEGT 60 Query: 78 GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSK 131 G +VF ++ S GR+++ G+P+D D L +M S+ Sbjct: 61 GGLNDSAGVVFTGETIKLPVSKDMLGRILSGSGEPLDEGPHIVPDKRLDINGAAMNPYSR 120 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SD 185 PP E+ +TGI ID L GQ++ +F+GSG+ + + AR S+ Sbjct: 121 RPP-------EEFIQTGISTIDGTNTLVRGQKLPIFSGSGLPHNEIALQIARQSTVLGSE 173 Query: 186 CFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244 V+ + +G E + F++D+ L+++VV + +D+ + R + P A+T AEY Sbjct: 174 EEFAVVFAAMGITHEESQTFMDDFEKTGALERAVVFLNHADDPAVERMITPRMALTAAEY 233 Query: 245 FSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 + + D +VL+IL +T +A ++R++ E+P +GYP ++++L L ER G + Sbjct: 234 LAYEHDMHVLVILTDMTNYAEALRQMGAAREEVPGRQGYPGYMYTDLASLYERAGVIKGR 293 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA-- 361 KG++T + + + GD+ PI D I +G IV++R L +G YPP++ L S+SRL Sbjct: 294 KGSVTQIPILTMPGDDITHPIPDLSGYITEGQIVVSRELHRKGIYPPINVLPSLSRLMGS 353 Query: 362 --DKAWSADEKKLVSSLTHLIHRFEETRDIR 390 + + D+ K VS L + E RD+R Sbjct: 354 GIGEGKTRDDHKKVSD--QLYAGYAEGRDLR 382 >gi|183206488|gb|ACC54442.1| ATP synthase beta subunit [Campanula bellidifolia] Length = 494 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 46 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 105 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 106 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 162 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 163 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 221 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 222 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 281 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 282 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 339 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 340 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 399 Query: 389 IRLIGG 394 I I G Sbjct: 400 IITILG 405 >gi|213401044|gb|ACJ47170.1| ATP synthase F1 beta subunit [Wolbachia endosymbiont of Dirofilaria immitis] Length = 312 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 156/289 (53%), Gaps = 20/289 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCH 160 GRV N +G IDG L KG+ ++E + +VPP+ Q++ E+ TGI+VID+ P Sbjct: 20 LGRVFNVVGDLIDGYGLL-KGEYNLEPIHRVPPSFTEQKIQEEVLVTGIKVIDLLAPYLK 78 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ + K+ + + VGER RE + + + N+ Sbjct: 79 GGKIGLFGGAGVGKTVLIMELVNN--IAKIHKGFSVFAGVGERIREGNDLYHEMINSNVI 136 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSI 266 K+V+V +E P R LTA+T+AEYF + +VL +D+I RF + Sbjct: 137 NINEHEKSKAVLVYGQMNEPPGARARVVLTALTMAEYFRDRENQDVLFFVDNIFRFTQAG 196 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++T G +P A GY ++ +++ + ERI + G+IT+V ++ V D+ DP Sbjct: 197 SEVSTLLGRIPSAVGYQPTLATDMGVMQERI--TSTTSGSITSVQAIYVPADDLTDPAPA 254 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS 375 + S LD VL+R +AE G YP VDPL S S+ +E V+S Sbjct: 255 TTFSHLDATTVLSRQIAEMGIYPAVDPLDSTSQSLSSEVIGEEHYRVAS 303 >gi|290892330|ref|ZP_06555325.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-071] gi|290558156|gb|EFD91675.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J2-071] Length = 456 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 30/404 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN + + IGE L G V + G + G Sbjct: 33 EYETHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGAEVVNLGHPIEVPVGETVQG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG + + I + P ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGLPE-PEAKVKWPIFREQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215 G+F G+G+GKS L+ SM + F V GER RE + + E L Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMMGGNSVFTGV-----GERVREGIGLYKELESSGVLP 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ++P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 IVL RS+A G +P V+PL S SR + + + +L + ++ R+ E ++I + Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433 G D K VH+ I +FL Q S +E +F EI Sbjct: 381 GMAELSDED-KKLVHRARKIRNFLSQPFYVSEKFTGTEGIFVEI 423 >gi|4519318|dbj|BAA75574.1| ATP synthase beta-subunit [Gonium viridistellatum] gi|21956010|dbj|BAC06375.1| ATP synthase beta-subunit [Gonium viridistellatum] Length = 376 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVVVSE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|332671302|ref|YP_004454310.1| ATP synthase F1 subunit beta [Cellulomonas fimi ATCC 484] gi|332340340|gb|AEE46923.1| ATP synthase F1, beta subunit [Cellulomonas fimi ATCC 484] Length = 493 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 161/304 (52%), Gaps = 19/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNR-QRVEKGFKTGIRVIDIFT 156 G+V N +G+ ++ G+ +EI + P PA ++ + F+TGI+VID+ T Sbjct: 110 GKVFNVIGEVLNA----APGE-KIEITERWPIHRKAPAFDQLESKTTMFETGIKVIDLLT 164 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212 P G +IG+F G+G+GK+ L+ + + +S+ VGER RE + I E Sbjct: 165 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIVEMEEAG 224 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K+ +V DE P R L+A+T+AEYF +VLL +D+I RF + E++T Sbjct: 225 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVAKQDVLLFIDNIFRFTQAGSEVST 284 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + Sbjct: 285 LLGRMPSAVGYQPNLADEMGLLQERITSTRGH--SITSLQAIYVPADDYTDPAPATTFAH 342 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIR 390 LD L+R +A G YP VDPLAS SR+ D + E V++ + ++ R +E +DI Sbjct: 343 LDATTELSREIASRGLYPAVDPLASTSRILDPRYVGQEHYDVATRVKSILQRNKELQDII 402 Query: 391 LIGG 394 I G Sbjct: 403 AILG 406 >gi|183206586|gb|ACC54491.1| ATP synthase beta subunit [Campanula pinatzii] Length = 498 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 50 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 226 KFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IITILG 409 >gi|153839883|ref|ZP_01992550.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ3810] gi|149746591|gb|EDM57579.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus AQ3810] Length = 448 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 GR++N LG ID +G ++ + + P+ Q E +TG++VID+ P G Sbjct: 67 GRIMNVLGDAIDERGEIGAEEVYS--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 124 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 125 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVE 184 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 185 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 244 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + + Sbjct: 245 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 302 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389 LD +VLNR++A G YP +DPL S SR D D + + + R++E +DI Sbjct: 303 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQDHYDIARGVQQTLQRYKELKDI 362 Query: 390 RLIGG 394 I G Sbjct: 363 IAILG 367 >gi|296809027|ref|XP_002844852.1| ATP synthase beta chain [Arthroderma otae CBS 113480] gi|238844335|gb|EEQ33997.1| ATP synthase beta chain [Arthroderma otae CBS 113480] Length = 520 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + KG I ++ P + + + TGI+V+D+ P G Sbjct: 132 LGRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARG 190 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 191 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 249 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 250 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 309 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 310 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 367 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 368 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDI 427 Query: 390 RLIGG 394 I G Sbjct: 428 IAILG 432 >gi|187930577|ref|YP_001901064.1| F0F1 ATP synthase subunit beta [Ralstonia pickettii 12J] gi|187727467|gb|ACD28632.1| ATP synthase F1, beta subunit [Ralstonia pickettii 12J] Length = 469 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I K P +TGI+VID+ P G Sbjct: 94 GRIMDVLGRPIDEAGPIA-CDEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 152 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 153 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 212 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 271 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 272 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 329 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E ++ + + R++E RDI I G Sbjct: 330 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILG 387 >gi|67459658|ref|YP_247282.1| F0F1 ATP synthase subunit beta [Rickettsia felis URRWXCal2] gi|67005191|gb|AAY62117.1| ATP synthase beta chain [Rickettsia felis URRWXCal2] Length = 508 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 98/319 (30%), Positives = 160/319 (50%), Gaps = 25/319 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149 RI GR++N +G+PIDG KGD+ +S K P Q E+ TGI Sbjct: 114 RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKSAPDFTNQSTERNILVTGI 168 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206 +V+D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 169 KVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 228 Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256 + + + K +V +E P R L+ +TIAE F ++G +VL + Sbjct: 229 HEMIDSGVIDLEKPENSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 288 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V Sbjct: 289 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKNGSITSVQAIYVP 346 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ Sbjct: 347 ADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 406 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 407 VQQILQTYKSLQDIIAILG 425 >gi|16802140|ref|NP_463625.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes EGD-e] gi|224498206|ref|ZP_03666555.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes Finland 1988] gi|224502984|ref|ZP_03671291.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL R2-561] gi|254832384|ref|ZP_05237039.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 10403S] gi|255028512|ref|ZP_05300463.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes LO28] gi|81593022|sp|Q8YAM6|ATPB1_LISMO RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|16409451|emb|CAC98307.1| lmo0092 [Listeria monocytogenes EGD-e] Length = 456 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 120/404 (29%), Positives = 193/404 (47%), Gaps = 30/404 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN + + IGE L G V + G + G Sbjct: 33 EYHTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG ++ I P ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGKPEPA-AEVKWPIFRAQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215 G+F G+G+GKS L+ SM + F V GER RE + + E L Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNSVFTGV-----GERVREGIGLYKELEASGVLP 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ++P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 IVL RS+A G +P V+PL S SR + + + +L + ++ R+ E ++I + Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433 G D K VH+ I +FL Q S +E F EI Sbjct: 381 GMAELSDED-RKLVHRARKIRNFLSQPFYVSEKFTGTEGTFVEI 423 >gi|283458316|ref|YP_003362935.1| F0F1-type ATP synthase subunit beta [Rothia mucilaginosa DY-18] gi|283134350|dbj|BAI65115.1| F0F1-type ATP synthase, beta subunit [Rothia mucilaginosa DY-18] Length = 490 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 90/272 (33%), Positives = 141/272 (51%), Gaps = 7/272 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG +D +S K D I P + + +TGI+ ID+ TP G Sbjct: 107 GHIFNVLGDALDVPNSEIKADTYWPIHRAAPGFAELEGSTEMLETGIKSIDLLTPYIKGG 166 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 167 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFTGVGERTREGNDLWVEMEEAGVLKDTA 226 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R LT +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 227 LVFGQMDEPPGTRLRVALTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 286 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 287 SAVGYQPNLADEMGLLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 344 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 L+R +A G YP +DPL+S SR+ D + E Sbjct: 345 LSREIASRGLYPAIDPLSSTSRILDAQYIGQE 376 >gi|183206486|gb|ACC54441.1| ATP synthase beta subunit [Michauxia tchihatchewii] Length = 482 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 37 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 96 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 97 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 153 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 212 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 213 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 272 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 273 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 330 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 331 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 390 Query: 389 IRLIGG 394 I I G Sbjct: 391 IITILG 396 >gi|149202397|ref|ZP_01879370.1| F0F1 ATP synthase subunit beta [Roseovarius sp. TM1035] gi|149144495|gb|EDM32526.1| F0F1 ATP synthase subunit beta [Roseovarius sp. TM1035] Length = 474 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + K I P + + TGI+V+D+ P Sbjct: 84 ATLGRILNVIGEPVDEGAPI-KATEYRSIHQPAPEFSEQSTASEILVTGIKVVDLLAPYA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESNV 200 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 201 IKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGSDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + ++G+IT++ +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKQGSITSIQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R+++E G YP VDPL S SRL D +E V+ + ++ R++ Sbjct: 319 ATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRLMDPQIVGEEHYQVARDVQGILQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|85704182|ref|ZP_01035285.1| ATP synthase subunit B [Roseovarius sp. 217] gi|85671502|gb|EAQ26360.1| ATP synthase subunit B [Roseovarius sp. 217] Length = 474 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + K I P + + TGI+V+D+ P Sbjct: 84 ATLGRILNVIGEPVDEGAPI-KATEYRSIHQPAPEFSEQSTASEILVTGIKVVDLLAPYA 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESNV 200 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 201 IKPDNLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGSDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + ++G+IT++ +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKQGSITSIQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R+++E G YP VDPL S SRL D +E V+ + ++ R++ Sbjct: 319 ATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRLMDPQIVGEEHYQVARDVQGILQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|255533299|ref|YP_003093671.1| ATP synthase F1 subunit beta [Pedobacter heparinus DSM 2366] gi|255346283|gb|ACU05609.1| ATP synthase F1, beta subunit [Pedobacter heparinus DSM 2366] Length = 500 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 42/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GR+ N +G+ IDG +++ K + PP E + TGI+VID+ P G Sbjct: 89 GRLFNVVGEAIDGINAVDK--TGGRPIHNTPPRFEDLSTETEVLFTGIKVIDLLEPYAKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +REFIE Sbjct: 147 GKIGLFGGAGVGKTVLIMELVNNIAKAYAGLSVFAGVGERTREGNDLLREFIESGVINYG 206 Query: 208 -DYL--------------GDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 ++L D LK K+ +V +E P R L+ +T+AEYF Sbjct: 207 DEFLHSMEKGGWDLKTVDTDKLKESKATLVFGQMNEPPGARARVALSGLTVAEYFRDGDG 266 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 267 EGAGKDILFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTKRG 324 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ A Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILSPAI 384 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + + R++E +DI I G Sbjct: 385 LGDEHYNTAQRVKETLQRYKELQDIIAILG 414 >gi|303273232|ref|XP_003055977.1| H+-or Na+-translocating f-type, v-type and A-type ATPase superfamily [Micromonas pusilla CCMP1545] gi|226462061|gb|EEH59353.1| H+-or Na+-translocating f-type, v-type and A-type ATPase superfamily [Micromonas pusilla CCMP1545] Length = 534 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + S+ I + PP +++ + TGI+V+D+ P Sbjct: 143 ATLGRIMNVIGEPIDECGPIETAS-SLAIHREAPPFVDQSTEMEMLVTGIKVVDLLAPYQ 201 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNL 214 G +IG+F G+G+GK+ L++ A+ V VGER RE + + + G + Sbjct: 202 KGGKIGLFGGAGVGKTVFIMELINNIAKGHGGFSVFAG-VGERTREGNDLYHEMIEGGVI 260 Query: 215 K--------KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 K K +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 261 KLGAQASDSKCTLVYGQMNEPPGARARVGLTGLTVAEYFRDFEGQDVLLFVDNIFRFTQA 320 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++L L ERI + KG+IT+V ++ V D+ DP Sbjct: 321 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTMKGSITSVQAIYVPADDLTDPAP 378 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R +AE G YP VDPL S SR+ DE + + ++ ++ Sbjct: 379 ATTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRMLSPLALGDEHYATARGVQKVLQDYK 438 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 439 NLQDIIAILG 448 >gi|183206554|gb|ACC54475.1| ATP synthase beta subunit [Edraianthus graminifolius] Length = 473 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 25 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 84 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 85 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 141 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 142 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 200 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 201 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 260 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 261 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 318 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 319 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 378 Query: 389 IRLIGG 394 I I G Sbjct: 379 IITILG 384 >gi|149190474|ref|ZP_01868745.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1] gi|148835728|gb|EDL52694.1| F0F1 ATP synthase subunit beta [Vibrio shilonii AK1] Length = 467 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G + S I + P + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDECGEIG-AEESYAIHREAPSYEEQSNEVALLETGVKVIDLVCPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLKK 216 +IG+F G+G+GK+ + + +S+ VGER RE +F +++ N++K Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEK 204 Query: 217 S-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR+ D E ++ + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQEHYEVARGVQQTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|301308760|ref|ZP_07214712.1| ATP synthase F1, beta subunit [Bacteroides sp. 20_3] gi|300833284|gb|EFK63902.1| ATP synthase F1, beta subunit [Bacteroides sp. 20_3] Length = 505 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PIDG L K D ++ I + P + ++ TGI+VID+ P G Sbjct: 94 GRLMNVTGDPIDGMAQLTK-DGALPIHREPPKFEDLTTTQEVLYTGIKVIDLLEPYAKGG 152 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ +++ F + + VGER RE +RE I+ + Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ KKS+ +V +E P R L+ +TIAE F K Sbjct: 211 GEEFKKSMEAGNWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDKA 270 Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + +K Sbjct: 271 SEGERKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388 Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389 E + ++ R +E +DI Sbjct: 389 IVGKEHYDTAQQVKQILQRNKELQDI 414 >gi|84683667|ref|ZP_01011570.1| ATP synthase subunit B [Maritimibacter alkaliphilus HTCC2654] gi|84668410|gb|EAQ14877.1| ATP synthase subunit B [Rhodobacterales bacterium HTCC2654] Length = 474 Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N G P+D + + D I + P + + TGI+VID+ P Sbjct: 84 ATLGRILNVTGDPVDEKGPI-EADEYRPIHADAPDFDEQATEAEILVTGIKVIDLLAPYS 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED-- 208 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE Sbjct: 143 KGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGLSVFAGVGERTREGNDLYHEMIESGV 200 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 DNL S +V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 201 LTPDNLPDSKIALVYGQMNEPPGARARIALTGLTLAEQFRDATGTDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V D+ DP Sbjct: 261 GSEMSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VLNR+++E G YP VDPL S SRL D DE K+ + ++ R++ Sbjct: 319 ATTFAHLDATTVLNRAISELGIYPAVDPLDSTSRLMDPLVIGDEHYKVARDVQGILQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|295136336|ref|YP_003587012.1| F0F1 ATP synthase subunit beta [Zunongwangia profunda SM-A87] gi|294984351|gb|ADF54816.1| F0F1 ATP synthase subunit beta [Zunongwangia profunda SM-A87] Length = 502 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 106/330 (32%), Positives = 164/330 (49%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG +L K G+ + I + P + + TGI+VID+ P G Sbjct: 90 GRLFNVVGDAIDGLGNLPKAGEAGLPIHREAPKFEDLSVSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 208 -DYL------GDNLKK----------SVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D++ G +LKK + V +E P R L+ +TIAEYF Sbjct: 210 DDFMHSMENGGWDLKKVDKEVMKGSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 ++G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 270 EAQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPDI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + L+ R++E +DI I G Sbjct: 388 LGKEHYDCAQRVKELLQRYKELQDIIAILG 417 >gi|284032930|ref|YP_003382861.1| ATP synthase F1 subunit beta [Kribbella flavida DSM 17836] gi|283812223|gb|ADB34062.1| ATP synthase F1, beta subunit [Kribbella flavida DSM 17836] Length = 484 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV + GK ++ D+S + I K P + + +TGI+V+D+ TP G Sbjct: 104 GRVWSVTGKCLNQDESEFEITERWPIHRKAPAFDQLESKTEMLETGIKVLDLLTPYVQGG 163 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDNL-KKSV 218 +IG+F G+G+GK+ ++ M R + + + VGER RE + I + + K + Sbjct: 164 KIGLFGGAGVGKTVMIQEMIYRIAHNFGGTSVFAGVGERTREGNDLIHEMEDAGVFKDTA 223 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF K +VLL +D+I RF + E++T G +P Sbjct: 224 LVFGQMDEPPGTRLRVALSALTMAEYFRDVKEQDVLLFIDNIFRFTQAGSEVSTLLGRMP 283 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 284 SAVGYQPNLADEMGVLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFAHLDATTE 341 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR+ D + E V+ + ++ + +E +DI I G Sbjct: 342 LSRDIASRGLYPAVDPLTSTSRILDPQYIGQEHYDVAVRVKQILQKNKELQDIIAILG 399 >gi|183206548|gb|ACC54472.1| ATP synthase beta subunit [Symphyandra hofmannii] Length = 488 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 40 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 99 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 100 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 156 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 215 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 216 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 275 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 276 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 333 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 334 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 393 Query: 389 IRLIGG 394 I I G Sbjct: 394 IITILG 399 >gi|119350511|gb|ABL63206.1| AtpB [Microspora sp. UTEX LB 472] Length = 392 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +G + ++ I P ++ F+TGI+V+D+ P Sbjct: 36 ATLGRIFNVLGEPVDELGPVGNQE-TLPIHRSAPAFVDLDTRLSIFETGIKVVDLLAPYR 94 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 95 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 154 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 155 EKNLAESKVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 214 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W EK ++ + R++E Sbjct: 273 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEKHYGTAQNVKKTLQRYKE 331 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 332 LQDIIAILG 340 >gi|332976825|gb|EGK13651.1| ATP synthase F1 sector beta subunit [Psychrobacter sp. 1501(2011)] Length = 475 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 27/314 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG+PID + D I + P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGRPIDEQGPVNAED-HWSIHRQAPSYDEQANSTDLLETGIKVIDLLCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF-----------IE 207 ++G+F G+G+GK+ + + +S+ VGER RE +F +E Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEAGVVDVE 201 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF------SSKGDNVLLILDSITR 261 ++ K +V +E P R LT +T+AEYF + KG +VLL +D+I R Sbjct: 202 NFTN---SKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGKDVLLFVDNIYR 258 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 + + E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ Sbjct: 259 YTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTQTGSITSIQAVYVPADDLT 316 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLI 380 DP + + LD +VL+R +A +G YP +DPL S SR D D + + ++ Sbjct: 317 DPSPATTFAHLDATVVLSRDIASQGIYPAIDPLDSTSRQLDPLVIGEDHYNVARGVQEVL 376 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 377 QRYKELKDIIAILG 390 >gi|183206588|gb|ACC54492.1| ATP synthase beta subunit [Campanula creutzburgii] Length = 498 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 50 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IITILG 409 >gi|119350527|gb|ABL63214.1| AtpB [Ourococcus multisporus] Length = 392 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 158/310 (50%), Gaps = 26/310 (8%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D LG K + S+ I P ++ F+TGI+V+D+ P Sbjct: 38 GRIFNVLGEPVD---ELGPVKNESSLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRR 94 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IE 207 G +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 95 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVE 154 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 155 KNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAG 212 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 213 AEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 270 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W +K + + R++ Sbjct: 271 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGDKHYDCAQRVKSTLQRYK 329 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 330 ELQDIIAILG 339 >gi|290969223|ref|ZP_06560748.1| ATP synthase F1, beta subunit [Megasphaera genomosp. type_1 str. 28L] gi|290780729|gb|EFD93332.1| ATP synthase F1, beta subunit [Megasphaera genomosp. type_1 str. 28L] Length = 472 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/298 (30%), Positives = 154/298 (51%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ +D D+ + + I P + + +TGI+V+D+ P G Sbjct: 93 GRIFNVLGQAVDKVDAKVEAEAYWPIHRPAPKFDEQATGTEILETGIKVVDLIAPYSKGG 152 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ + + + + VGER RE + + + K+ Sbjct: 153 KIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFTGVGERTREGNDLWNEMKESGVISKTA 212 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AEYF K +VLL +D+I RF + E++ G +P Sbjct: 213 LVYGQMNEPPGARMRVGLTGLTMAEYFRDKEHQDVLLFIDNIFRFIQAGSEVSALLGRIP 272 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +++ L ERI + + G+IT+V +V V D+ DP + + LD V Sbjct: 273 SAVGYQPTLGTDVGALQERI--TSTKSGSITSVQAVYVPADDLTDPAPAATFAHLDATTV 330 Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +AE G YP VDPL S SR+ D D + ++ ++ ++ + +DI I G Sbjct: 331 LSRQIAELGIYPAVDPLDSTSRILDPHVIGEDHYQTARAVQAILQKYNDLQDIIAILG 388 >gi|313838310|gb|EFS76024.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL086PA1] Length = 484 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 158/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + E + + ++ R +E +DI Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLYVGQEHYDSATQVKQILQRNKELQDII 395 Query: 391 LIGG 394 I G Sbjct: 396 AILG 399 >gi|289643099|ref|ZP_06475229.1| ATP synthase F1, beta subunit [Frankia symbiont of Datisca glomerata] gi|289507063|gb|EFD28032.1| ATP synthase F1, beta subunit [Frankia symbiont of Datisca glomerata] Length = 480 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 158/298 (53%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V N LG+P+D D+ I + P + + F TGI+VID+ P G Sbjct: 105 GHVFNVLGEPLDVPSV--DTDVRRSIHATAPAFDQLESKTEMFPTGIKVIDLLAPYVRGG 162 Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ ++ M R + F V + + VGER RE + F+E + + Sbjct: 163 KIGLFGGAGVGKTVVIQEMINRVAKQFSGVSVFAGVGERTREGNDLFLEMTEAGVINDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRLRIALAALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 283 SAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDITDPAPHTTFTHLDATTV 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R++++ G YP VDPL S SR+ D + E V+ + ++ R+++ +DI I G Sbjct: 341 LSRAISDLGIYPAVDPLDSSSRILDARYLGQEHYDVAREVQRILQRYKDLQDIIAILG 398 >gi|54023032|ref|YP_117274.1| F0F1 ATP synthase subunit beta [Nocardia farcinica IFM 10152] gi|81823233|sp|Q5Z0Y1|ATPB_NOCFA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|54014540|dbj|BAD55910.1| putative ATP synthase beta subunit [Nocardia farcinica IFM 10152] Length = 482 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D LG+ I K P + + +TGI+VID+ TP G Sbjct: 104 GHVFNALGDCLD-TPGLGRDGEQWGIHRKPPSFDQLEGKTELLETGIKVIDLLTPYVKGG 162 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ + Sbjct: 163 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLHLEMEEMGVLQDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRMRVALSALTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 283 SAVGYQPTLADEMGELQERITSTRGR--SITSLQAIYVPADDYTDPAPATTFAHLDATTE 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L+R ++++G YP VDPL S SR+ + + D V++ + ++ +++E +DI I G Sbjct: 341 LSRPISQKGIYPAVDPLTSTSRILEASIVGDRHFAVANEVKRILQKYKELQDIIAILG 398 >gi|157829067|ref|YP_001495309.1| F0F1 ATP synthase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] gi|166222409|sp|A8GTS6|ATPB_RICRS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358727|sp|B0BVB6|ATPB_RICRO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157801548|gb|ABV76801.1| F0F1 ATP synthase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] Length = 473 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149 RI GR++N +G+PIDG KGD+ +S K P Q E+ TGI Sbjct: 80 RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206 +VID+ P G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194 Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256 + + + K +V +E P R L+ +TIAE F ++G +VL + Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVP 312 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 373 VQQVLQTYKSLQDIITILG 391 >gi|322367975|ref|ZP_08042544.1| V-type ATP synthase subunit B [Haladaptatus paucihalophilus DX253] gi|320551991|gb|EFW93636.1| V-type ATP synthase subunit B [Haladaptatus paucihalophilus DX253] Length = 468 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/306 (30%), Positives = 152/306 (49%), Gaps = 19/306 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+PIDG + D +I+ R+ E+ +TG+ ID L G Sbjct: 84 LGRVLDGSGQPIDGGPEIVP-DRRDDIIGAAINPYAREYPEEFIQTGVSAIDGMNTLVRG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCF-----------DKVIISLVGERGREVREFIEDYL 210 Q++ +F+ SG+ + L AR V+ +G E EF+ED+ Sbjct: 143 QKLPIFSASGLPHNDLALQIARQASVLEDEEEGEESEFAVVFGAMGITAEEANEFMEDFE 202 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268 L++SVV + +D+ + R + P A+T AEY + + D +VL+IL +T + ++RE Sbjct: 203 RTGALERSVVFMNLADDPAVERTVTPRLALTTAEYLAFEKDYHVLVILTDMTNYCEALRE 262 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I E+P RGYP ++++L +L ER G E G++T + + + GD+ PI D Sbjct: 263 IGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGRDGSVTQIPILTMPGDDDTHPIPDLT 322 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRF 383 I +G I ++R L +G PP++PL S+SRL D AD + + + Sbjct: 323 GYITEGQIYIDRDLNSQGIQPPINPLPSLSRLMDDGIGEGLTRADHSGVSDQMYAAYAQG 382 Query: 384 EETRDI 389 E+ RD+ Sbjct: 383 EDLRDL 388 >gi|289581045|ref|YP_003479511.1| ATP synthase subunit beta [Natrialba magadii ATCC 43099] gi|289530598|gb|ADD04949.1| ATP synthase, B subunit [Natrialba magadii ATCC 43099] Length = 472 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 89/277 (32%), Positives = 148/277 (53%), Gaps = 17/277 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+PIDG + + +I+ + +R+ E+ +TG+ ID L G Sbjct: 84 LGRVLDGSGEPIDGGPEIVP-ESREDIVGEAINPFSREYPEEFIQTGVSGIDGMNTLVRG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--------------KVIISLVGERGREVREFIE 207 Q++ +F+GSG+ + L AR VI +G E EF++ Sbjct: 143 QKLPIFSGSGLPHNELALQIARQATVPEEEEAGDDEEGSEFAVIFGAMGITQEEANEFMD 202 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 D+ L++SVV + +D+ + R + P A+T AEY + + D +VL+IL IT + + Sbjct: 203 DFERTGALERSVVFMNLADDPAVERTVTPRLALTTAEYLAFEKDYHVLVILTDITNYCEA 262 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 +REI E+P RGYP ++++L +L ER G E ++G++T + + + GD+ PI Sbjct: 263 LREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGQEGSVTQIPILTMPGDDDTHPIP 322 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 D I +G IV++R+L +G PPV+ L S+SRL D Sbjct: 323 DLTGYITEGQIVMDRNLNSQGIEPPVNVLPSLSRLMD 359 >gi|183206530|gb|ACC54463.1| ATP synthase beta subunit [Campanula carpatha] Length = 498 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 50 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IITILG 409 >gi|94971358|ref|YP_593406.1| F0F1 ATP synthase subunit beta [Candidatus Koribacter versatilis Ellin345] gi|118573501|sp|Q1IIG8|ATPB_ACIBL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|94553408|gb|ABF43332.1| ATP synthase F1 subcomplex beta subunit [Candidatus Koribacter versatilis Ellin345] Length = 480 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 164/310 (52%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQ-RVEKGFKTGIRVIDIFTP 157 GRV+N +G+P+D G + +E + + PA + Q + F+TGI+VID+ P Sbjct: 93 LGRVMNVIGEPVDQ-----LGPIMVEKRNPIHRQAPAFDEQATTAEMFETGIKVIDLIQP 147 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVR----EFIEDYL 210 G +IG+F G+G+GK+ ++ + + VGER RE EF E + Sbjct: 148 FLKGGKIGLFGGAGVGKTVVIQELINNVAKQHGGFSVFGGVGERTREGNDLWLEFTEAGV 207 Query: 211 ---GDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 GD K K+ +V E P R LTA+T+AEYF +G + LL +D+I RF + Sbjct: 208 ITPGDPSKSKAALVYGQMTEPPGARLRVALTALTVAEYFRDEEGTDTLLFIDNIFRFTQA 267 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++T G +P A GY ++ +E+ L ERI + ++G++T+V ++ V D+ DP Sbjct: 268 GSEVSTLLGRMPSAVGYQPNLATEMGELQERI--TSTKRGSVTSVQAIYVPADDLTDPAP 325 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R+L E G YP VDPL S SR+ D E + + ++ +++ Sbjct: 326 ATTFAHLDATTVLSRALTEIGIYPAVDPLGSTSRILDPRIVGQEHYDVAQGVKGILQQYK 385 Query: 385 ETRDIRLIGG 394 + +DI I G Sbjct: 386 DLQDIIAILG 395 >gi|7708676|emb|CAB90016.1| ATP synthase beta subunit [Thunbergia coccinea] Length = 484 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|11467561|ref|NP_043707.1| ATP synthase CF1 beta subunit [Odontella sinensis] gi|1352032|sp|P49647|ATPB_ODOSI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|297868|emb|CAA51161.1| ATPase [Odontella sinensis] gi|1185256|emb|CAA91739.1| ATP synthase CF1 subunit beta [Odontella sinensis] Length = 475 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N +G+P+D GD S D ++ I + P + F+TGI+V+D+ P Sbjct: 89 STLGRIFNVIGEPVDEQGDVSY---DETLPIHREAPAFTELETKPSIFETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + E+ Sbjct: 146 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESG 204 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N K+S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 205 VINENNFKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQ 264 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPA 322 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + S + ++ ++ + R+ Sbjct: 323 PATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVSGEHYEIAETVKETLQRY 382 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 383 KELQDIIAILG 393 >gi|320335339|ref|YP_004172050.1| V-type ATP synthase subunit beta [Deinococcus maricopensis DSM 21211] gi|319756628|gb|ADV68385.1| V-type ATP synthase beta chain [Deinococcus maricopensis DSM 21211] Length = 469 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 89/276 (32%), Positives = 151/276 (54%), Gaps = 11/276 (3%) Query: 94 RISPSACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ S GR + LG+PIDG + + + +S+ + P A R + E+ +TGI I Sbjct: 81 RLGVSKEMIGRRFDGLGRPIDGLPNVVAEKRVSINGQAMNPAA--RAKPEEFIQTGISTI 138 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFI 206 D+ T L GQ++ +F+GSG+ + L + AR V+ + +G REV F Sbjct: 139 DVNTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDFAVVFAAMGLTQREVSFFT 198 Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264 +++ L +SV+ + +D+ + R + P A+T AEY + G +VL+IL +T + Sbjct: 199 QEFERTGALARSVLFLNKADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDLTNYCE 258 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI E+P RG+P ++++L L ER G E + G++T + + + D+ PI Sbjct: 259 ALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVIEGKPGSVTQIPILSMPDDDITHPI 318 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 D I +G IV++R+L +G PP++PL S+SRL Sbjct: 319 PDLTGYITEGQIVVDRALNAKGVNPPINPLPSLSRL 354 >gi|315274370|ref|ZP_07869346.1| ATP synthase subunit beta 1 [Listeria marthii FSL S4-120] gi|313615981|gb|EFR89149.1| ATP synthase subunit beta 1 [Listeria marthii FSL S4-120] Length = 447 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 120/404 (29%), Positives = 195/404 (48%), Gaps = 30/404 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN + + IGE L G V + G + G Sbjct: 24 EYKTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGAEVVNLGHPIEVPVGETVQG 79 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG + + I + P ++ TGI+VID+ P+ G + Sbjct: 80 RMLNVYGKAIDGLPE-PEAKVKWPIFREQPLLRELDTNKEILYTGIKVIDLICPILKGGK 138 Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215 G+F G+G+GKS L+ SM + F V GER RE + + E L Sbjct: 139 TGLFGGAGVGKSVLMQELINNISMMGGNSVFTGV-----GERVREGIGLYKELESSGVLP 193 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G Sbjct: 194 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 253 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ++P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD Sbjct: 254 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 311 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 IVL RS+A G +P V+PL S SR + + + +L + ++ R+ E ++I + Sbjct: 312 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 371 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433 G D K VH+ I +FL Q S +E +F EI Sbjct: 372 GMAELSDED-KKLVHRARKIRNFLSQPFYVSEKFTGTEGIFVEI 414 >gi|302505577|ref|XP_003014495.1| hypothetical protein ARB_07057 [Arthroderma benhamiae CBS 112371] gi|291178316|gb|EFE34106.1| hypothetical protein ARB_07057 [Arthroderma benhamiae CBS 112371] Length = 623 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PID + KG I ++ P + + + TGI+V+D+ P G Sbjct: 236 GRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARGG 294 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 +IG+F G+G+GK+ L++ A++ V VGER RE + + D Sbjct: 295 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQLD 353 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 354 GESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSA 413 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 414 LLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAH 471 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 472 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDII 531 Query: 391 LIGG 394 I G Sbjct: 532 AILG 535 >gi|297624240|ref|YP_003705674.1| H+transporting two-sector ATPase alpha/subunit beta central region [Truepera radiovictrix DSM 17093] gi|297165420|gb|ADI15131.1| H+transporting two-sector ATPase alpha/beta subunit central region [Truepera radiovictrix DSM 17093] Length = 472 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 92/296 (31%), Positives = 151/296 (51%), Gaps = 14/296 (4%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ S GR N +G+PIDG + D + I + RQ+ E+ +TGI ID Sbjct: 83 RLGVSREMIGRRFNGIGEPIDGLPEV-VADKRLPIGGAPINPVARQKPEEFIQTGISTID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIE 207 L GQ++ +F+GSG+ + L + AR V+ + +G RE+ F + Sbjct: 142 TLITLVRGQKLPIFSGSGLPANELAAQIARQAKVLGEGSEFAVVFAAMGVTQREITYFTQ 201 Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 ++ L +SV+ + +D+ + R + P A+T AEY + + D +VL+IL +T + + Sbjct: 202 EFERTGALARSVLFLNKADDPAVERLLTPKMALTAAEYLAFEHDYHVLVILTDMTNYCEA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 +REI E+P RGYP ++++L + ER G E KG++T + + + D+ PI Sbjct: 262 LREIGGAREEIPGRRGYPGYMYTDLASIYERAGVVEGRKGSVTQLPILTMPDDDVTHPIP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSL 376 D I +G I L R+L +G YPP++P S+SRL + AD K + L Sbjct: 322 DLTGYITEGQIYLARNLHSQGIYPPINPGPSLSRLMNNGIGKGKTRADHKNIADQL 377 >gi|241729762|ref|XP_002413810.1| F0F1-type ATP synthase, beta subunit, putative [Ixodes scapularis] gi|215507626|gb|EEC17118.1| F0F1-type ATP synthase, beta subunit, putative [Ixodes scapularis] Length = 563 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 157/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + D + I P + ++ TGI+V+D+ P G Sbjct: 176 LGRIMNVIGEPIDERGPI-PSDKFLSIHQDAPEFVEMSVEQEILVTGIKVVDLLAPYSKG 234 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 235 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVISL 293 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +++AEYF +G +VLL +D+I RF + E+ Sbjct: 294 KDKTSKVSLVYGQMNEPPGARARVALTGLSVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 353 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 354 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 411 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D E + + ++ ++ +D Sbjct: 412 AHLDATTVLSRGIAELGIYPAVDPLDSTSRIMDPNVVGQEHYDIARGVQKILQDYKSLQD 471 Query: 389 IRLIGG 394 I I G Sbjct: 472 IIAILG 477 >gi|11320813|dbj|BAB18459.1| ATP synthase beta-subunit [Lobomonas monstruosa] Length = 376 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D GD K + ++ I P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVDEMGDV---KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFVDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W EK + ++ + R+ Sbjct: 264 ATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYETAQNVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|169260965|gb|ACA52084.1| ATP synthase beta subunit [Isoetes sp. Rai 1005] Length = 493 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D S+ + I P F+TGI+V+D+ P Sbjct: 103 ATLGRIFNVLGEPVDNSGSV-DASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIN 221 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 K +V +ESP R LTA+T+AEYF +VLL +D+I RF + Sbjct: 222 EQNISESKVALVYGQMNESPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPVT 339 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEQHYETAQGVKQTLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|295836483|ref|ZP_06823416.1| ATP synthase F1, beta subunit [Streptomyces sp. SPB74] gi|295836486|ref|ZP_06823419.1| ATP synthase F1, beta subunit [Streptomyces sp. SPB74] gi|295826052|gb|EFG64644.1| ATP synthase F1, beta subunit [Streptomyces sp. SPB74] gi|295826055|gb|EDY45954.2| ATP synthase F1, beta subunit [Streptomyces sp. SPB74] Length = 480 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 93/298 (31%), Positives = 158/298 (53%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G+V N LG+ ++ + I P + + F+TGI+VID+ TP G Sbjct: 101 GKVFNTLGEVLNKPEENANVGERWAIHRTAPRFDELESKTEMFETGIKVIDLLTPYVKGG 160 Query: 163 RIGVFAGSGIGKSTLLS--MFARSDCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 +IG+F G+G+GK+ L+ ++ ++ D V + + VGER RE + I++ + K+ Sbjct: 161 KIGLFGGAGVGKTVLIQEMIYRVANNHDGVSVFAGVGERTREGNDLIDEMSESGVIDKTA 220 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L +T+AEYF + +VL +D+I RF + E++T G +P Sbjct: 221 LVFGQMDEPPGTRLRVALAGLTMAEYFRDVQKQDVLFFIDNIFRFTQAGSEVSTLLGRMP 280 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 281 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDLTDPAPATTFAHLDATTV 338 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSA-DEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++E+G YP VDPL S SR+ D + A D + +++ ++++ +DI I G Sbjct: 339 LSRPISEKGIYPAVDPLDSTSRILDPRYIAKDHYDTAMRVKNILQKYKDLQDIIAILG 396 >gi|225849603|ref|YP_002729837.1| V-type ATP synthase subunit B [Persephonella marina EX-H1] gi|225645972|gb|ACO04158.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Persephonella marina EX-H1] Length = 447 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 170/330 (51%), Gaps = 9/330 (2%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSAC 100 V G+ VV + N D G+V + DI I +G I+ D+ F F+I S Sbjct: 24 VRYGEKVVIRTDNRDITGKVSVLTEDITVIEILGESSGINPQDVRVRFTGEPFKIPVSEG 83 Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+++ G P+D S+ + ++I + R E+ TGI ID L Sbjct: 84 MLGRILDPFGNPLDELGSIIP-EAFLDISGEAYNPSKRLYPEEIIYTGISSIDGLNTLVK 142 Query: 161 GQRIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERGREVREFIEDYL-GDNLK 215 GQ++ VFA SG+ L++ R ++ VG + IED G N Sbjct: 143 GQKLPVFAVSGVPTDQLVAQIVRQIKTGSENRATVLCAVGVKYETANYLIEDITSGGNFP 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSG 274 K+ V + +DE P+ ++ +A+T++E+ + KG +V++++ +T + ++REI++ G Sbjct: 203 KTAVFLNLADEPPVNSLISVRSALTLSEFLAFEKGYDVVVVIYDMTNYCDALREISSKRG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E+P +GYP ++S+L + ER G + KG++T + + + D+ PI D I +G Sbjct: 263 EIPGRKGYPGYMYSDLASIYERAGVLKGMKGSVTQIPVLTMPDDDITHPIPDLTGYITEG 322 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 IVL+RSL + G YPPV+ L S+SRL ++A Sbjct: 323 QIVLDRSLHQRGVYPPVNVLPSLSRLMNRA 352 >gi|157964949|ref|YP_001499773.1| F0F1 ATP synthase subunit beta [Rickettsia massiliae MTU5] gi|157844725|gb|ABV85226.1| ATP synthase beta chain [Rickettsia massiliae MTU5] Length = 499 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 159/316 (50%), Gaps = 19/316 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVI 152 RI GR++N +G+PIDG + ++S + K P Q E+ TGI+VI Sbjct: 106 RIPVGTETLGRIMNVVGEPIDGKGDIKSSNISS--IYKPAPDFTNQSTERNILVTGIKVI 163 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + + Sbjct: 164 DLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEM 223 Query: 210 LGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSI 259 + + K +V +E P R L+ +TIAE F ++G +VL +D+I Sbjct: 224 IDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNI 283 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ Sbjct: 284 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVPADD 341 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ + Sbjct: 342 LTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQ 401 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 402 VLQTYKSLQDIIAILG 417 >gi|111225280|ref|YP_716074.1| F0F1 ATP synthase subunit beta [Frankia alni ACN14a] gi|111152812|emb|CAJ64556.1| membrane-bound ATP synthase, F1 sector, beta-subunit [Frankia alni ACN14a] Length = 486 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V N LG P+D D + I + P + + F TGI+VID+ P G Sbjct: 112 GHVFNVLGTPLDVDKV--DAETRWSIHRQAPAFDQLESKTEMFTTGIKVIDLLAPYVRGG 169 Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ ++ R + F V + + VGER RE + F+E ++ + Sbjct: 170 KIGLFGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVIEDTA 229 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 230 LVFGQMDEPPGTRLRVALGALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 289 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 290 SAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDAQTV 347 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+++ G YP V PL S SR+ D + E + ++ R+++ +DI I G Sbjct: 348 LDRSISDLGIYPAVSPLDSNSRILDARYLGQEHYDTAREVQRILQRYKDLQDIIAILG 405 >gi|297539943|ref|YP_003675712.1| ATP synthase F1 subunit beta [Methylotenera sp. 301] gi|297259290|gb|ADI31135.1| ATP synthase F1, beta subunit [Methylotenera sp. 301] Length = 479 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 156/305 (51%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I K P +TGI+VID+ P G Sbjct: 97 GRIMDVLGRPIDEAGPI-DCDERRAIHQKAPTFEELSPSVDLLETGIKVIDLVCPFAKGG 155 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 ++G+F G+G+GK+ L++ A+ V VGER RE +F + D Sbjct: 156 KVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMAEAGVIKLD 214 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 ++K+S V V +E P R L+ +T+AE F +G +VL +D+I R+ + E++ Sbjct: 215 DMKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 274 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 275 ALLGRMPSAVGYQPTLADEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQ 332 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D +E V+ S+ + R++E RDI Sbjct: 333 HLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYNVARSVQQTLQRYKELRDI 392 Query: 390 RLIGG 394 I G Sbjct: 393 IAILG 397 >gi|302656393|ref|XP_003019950.1| hypothetical protein TRV_05996 [Trichophyton verrucosum HKI 0517] gi|291183727|gb|EFE39326.1| hypothetical protein TRV_05996 [Trichophyton verrucosum HKI 0517] Length = 623 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PID + KG I ++ P + + + TGI+V+D+ P G Sbjct: 236 GRIMNVTGDPIDERGPI-KGVKMAPIHAEAPEFVEQSTSAEVLVTGIKVVDLLAPYARGG 294 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 +IG+F G+G+GK+ L++ A++ V VGER RE + + D Sbjct: 295 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQLD 353 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 354 GESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSA 413 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 414 LLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFAH 471 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIR 390 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 472 LDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEDHYNTATRVQQMLQEYKSLQDII 531 Query: 391 LIGG 394 I G Sbjct: 532 AILG 535 >gi|23503621|dbj|BAC20407.1| ATP synthase beta-subunit [Carteria cerasiformis] Length = 376 Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 158/307 (51%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGPVETQE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 150 NLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAEV 209 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 210 SALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEETR 387 S LD VL+R LA +G YP VDPL S S + + W EK S+ + + R++E + Sbjct: 268 SHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYDSAQKVKQTLQRYKELQ 326 Query: 388 DIRLIGG 394 DI I G Sbjct: 327 DIIAILG 333 >gi|183206496|gb|ACC54446.1| ATP synthase beta subunit [Campanula laciniata] Length = 498 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 50 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IITILG 409 >gi|302348220|ref|YP_003815858.1| V-type ATP synthase subunit B [Acidilobus saccharovorans 345-15] gi|302328632|gb|ADL18827.1| V-type ATP synthase subunit B [Acidilobus saccharovorans 345-15] Length = 467 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 94/287 (32%), Positives = 153/287 (53%), Gaps = 19/287 (6%) Query: 98 SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 SA GR +ALGKPIDG + K D++ S + PA+ R E +TG+ ID Sbjct: 86 SADMLGRTFDALGKPIDGGPDIIAEEKYDING---SPINPAV-RAYPEDFIQTGVSAIDG 141 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGRE---VREF 205 L GQ++ +F+G+G+ + L + AR V+ + +G + + R+F Sbjct: 142 MNTLVRGQKLPIFSGTGLPHNELAAQIARQATVRGEEEEFSVVFAAIGIKYDDYMFFRKF 201 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 E+ +K+ + V +DE +LR + P A+T+AEY + + D +VL+IL +T +A Sbjct: 202 FEE--TGAMKRVAMFVNLADEPAMLRLVTPRAALTLAEYLAYENDMHVLVILTDMTNYAE 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI+ E+P +GYP ++S+L + ER G KG+IT + + + D+ PI Sbjct: 260 ALREISAAREEVPGRQGYPGYMYSDLASIYERAGRVHGRKGSITQMPILTMPNDDITHPI 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 D I +G IVL+R L G YPP++ L S+SRL + A + + Sbjct: 320 PDLTGYITEGQIVLSRDLYNRGIYPPINVLMSLSRLMKEGIGAGKTR 366 >gi|47095163|ref|ZP_00232775.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|254827524|ref|ZP_05232211.1| ATP synthase F1 [Listeria monocytogenes FSL N3-165] gi|254899580|ref|ZP_05259504.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes J0161] gi|254913217|ref|ZP_05263229.1| ATP synthase F1 [Listeria monocytogenes J2818] gi|254937598|ref|ZP_05269295.1| ATP synthase F1 [Listeria monocytogenes F6900] gi|284803169|ref|YP_003415034.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5578] gi|284996310|ref|YP_003418078.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5923] gi|47016508|gb|EAL07429.1| ATP synthase F1, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|258599900|gb|EEW13225.1| ATP synthase F1 [Listeria monocytogenes FSL N3-165] gi|258610198|gb|EEW22806.1| ATP synthase F1 [Listeria monocytogenes F6900] gi|284058731|gb|ADB69672.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5578] gi|284061777|gb|ADB72716.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes 08-5923] gi|293591217|gb|EFF99551.1| ATP synthase F1 [Listeria monocytogenes J2818] Length = 456 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 120/404 (29%), Positives = 193/404 (47%), Gaps = 30/404 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN + + IGE L G V + G + G Sbjct: 33 EYHTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG ++ I P ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGKPEPA-AEVKWPIFRDQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215 G+F G+G+GKS L+ SM + F V GER RE + + E L Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNSVFTGV-----GERVREGIGLYKELEASGVLP 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ++P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 IVL RS+A G +P V+PL S SR + + + +L + ++ R+ E ++I + Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433 G D K VH+ I +FL Q S +E F EI Sbjct: 381 GMAELSDED-RKLVHRARKIRNFLSQPFYVSEKFTGTEGTFVEI 423 >gi|183206604|gb|ACC54500.1| ATP synthase beta subunit [Roella ciliata] Length = 488 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTRTTWPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 209 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIITILG 399 >gi|118917394|dbj|BAF40503.1| ATP synthase beta subunit [Piriqueta cistoides] Length = 489 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + + + PA + E F+TGI+V+D+ P Sbjct: 97 ATLGRIFNVLGEPVD---DLGPVDTRTASPIHRSAPAFIQLDTELSIFETGIKVVDLLAP 153 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG--- 211 G +IG+F G+G+GK+ L+ + +S+ VGER RE + ++ Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGV 213 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 214 INEENLTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQSVLLFIDNIFRFVQA 273 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 GSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + DE + + R++ Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQSQIVGDEHYDTAQRVKQTLQRYK 391 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 392 ELQDIIAIMG 401 >gi|91178124|gb|ABE27297.1| mitochondrial F-ATPase beta subunit [Yarrowia lipolytica] Length = 337 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 101/305 (33%), Positives = 160/305 (52%), Gaps = 18/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN G+PID + + + I + P + + +TGI+V+D+ P G Sbjct: 20 GRIINVCGEPIDERGPI-EASKYLPIHADPPTFAEQSTSAEVLETGIKVVDLLAPYARGG 78 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + NL Sbjct: 79 KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFCG-VGERTREGNDLYREMKETGV-INL 136 Query: 215 K---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 + K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 137 EGESKVTLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVS 196 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + + Sbjct: 197 ALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSVTSVQAVYVPADDLTDPAPATTFA 254 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SRL D + + S++ + ++ +DI Sbjct: 255 HLDATTVLSRGISELGIYPAVDPLDSKSRLLDIDVVGKEHYDVASNVQQTLQAYKSLQDI 314 Query: 390 RLIGG 394 I G Sbjct: 315 IAILG 319 >gi|300689832|ref|YP_003750827.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum PSI07] gi|299076892|emb|CBJ49505.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum PSI07] Length = 467 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 152/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I K P +TGI+VID+ P G Sbjct: 92 GRIMDVLGRPIDEAGPIA-CDEKRAIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D + + ++ + + R++E RDI I G Sbjct: 328 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGTEHYEVADRVKKTLQRYKELRDIIAILG 385 >gi|183206498|gb|ACC54447.1| ATP synthase beta subunit [Campanula tubulosa] Length = 498 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 50 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 225 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 226 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IITILG 409 >gi|329894812|ref|ZP_08270612.1| ATP synthase beta chain [gamma proteobacterium IMCC3088] gi|328922706|gb|EGG30040.1| ATP synthase beta chain [gamma proteobacterium IMCC3088] Length = 465 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/310 (30%), Positives = 156/310 (50%), Gaps = 21/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID +G+ + + I K P E+ +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPIDEKGPIGEEERA-SIHRKAPTYEELAASEELLETGIKVIDLVCPFA 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------- 205 G ++G+F G+G+GK+ + + + +S+ VGER RE +F Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIATEHSGLSVFAGVGERTREGNDFYYEMQESKVVD 199 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHS 265 +E++ K +V +E P R LT +T+AE F +G +VLL +D+I R+ + Sbjct: 200 VENFTN---SKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLA 256 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ E+ L ERI + G+IT++ +V V D+ DP Sbjct: 257 GTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTRVGSITSIQAVYVPADDLTDPSP 314 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD +VL+R +A +G YP VDPL S SR D E + ++ R++ Sbjct: 315 ATTFAHLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLLVGQEHYNAARGVQTVLQRYK 374 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 375 ELKDIIAILG 384 >gi|225010190|ref|ZP_03700662.1| ATP synthase F1, beta subunit [Flavobacteria bacterium MS024-3C] gi|225005669|gb|EEG43619.1| ATP synthase F1, beta subunit [Flavobacteria bacterium MS024-3C] Length = 502 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG +L K G + I + P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGLGNLPKAGKDGLPIHRQAPRFEDLSTATEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 210 DDFLHSMEEGGWDLTKVDKSAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTAEI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 D + L+ R++E +DI I G Sbjct: 388 LGKDHYGCAQRVKELLQRYKELQDIIAILG 417 >gi|22651728|gb|AAM26936.1| ATP synthase beta subunit [Drosera capensis] Length = 475 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 156/310 (50%), Gaps = 18/310 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 + GR+ N LG+PID + S + + PPA + + F+TGI+V+D+ P Sbjct: 88 SLTLGRIFNVLGQPIDNLGPVATDTTSP--IHRSPPAFIQLETKLSIFETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL 214 G + G+F G+G+GK+ L+ + +S+ VGER RE + ++ + Sbjct: 146 YRRGGKTGLFGGAGVGKTVLIMELINNIAKAHRGVSVFAGVGERTREGNDLYKEMKESGV 205 Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 206 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 265 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 266 GSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 323 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + DE + + + R++ Sbjct: 324 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGDEHYETAQQVKQTLQRYK 383 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 384 EVQDIIAILG 393 >gi|85374584|ref|YP_458646.1| F0F1 ATP synthase subunit beta [Erythrobacter litoralis HTCC2594] gi|123005015|sp|Q2N8Z2|ATPB_ERYLH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|84787667|gb|ABC63849.1| ATP synthase beta subunit [Erythrobacter litoralis HTCC2594] Length = 485 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 93/311 (29%), Positives = 157/311 (50%), Gaps = 21/311 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID +G D + I ++ P +++ TGI+VID+ P G Sbjct: 93 LGRIMNVVGEPIDMRGPVG-ADKANPIHAEAPAFVDQSTDAAILVTGIKVIDLLAPYAKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + +S+ VGER RE + ++L + Sbjct: 152 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKN 211 Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 K +V +E P R L+ +T+AEYF +G +VL +D+I RF Sbjct: 212 EAGEAISEGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDEEGQDVLFFVDNIFRFTQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 272 AGSEVSALLGRIPSAVGYQPTLSTDMGNLQERI--TSTTKGSITSVQAIYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD LNR+++E G YP VDPL S SR L + + + + + ++ Sbjct: 330 PATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRVLEPRVVGQEHYETARKVQETLQKY 389 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 390 KSLQDIIAILG 400 >gi|152980404|ref|YP_001355317.1| F0F1 ATP synthase subunit beta [Janthinobacterium sp. Marseille] gi|166201713|sp|A6T470|ATPB_JANMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|151280481|gb|ABR88891.1| F-type H+-transporting ATPase beta chain [Janthinobacterium sp. Marseille] Length = 466 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 103/340 (30%), Positives = 164/340 (48%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 IV +G + + G ++ + G P GR+++ LG PID + + + Sbjct: 49 IVRTIALGTSDGLRRGMIIQNTGNPITVPVGTATLGRIMDVLGNPIDECGPVSH-ERTAS 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P + +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 108 IHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 167 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAP 235 + V VGER RE +F + + K +V +E P R Sbjct: 168 AHSGLSVFAG-VGERTREGNDFYHEMADAKVVDLENPANSKVAMVYGQMNEPPGNRLRVA 226 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT +T+AE F +G +VL +D+I RF + E++ G +P A GY ++ E+ RL E Sbjct: 227 LTGLTMAEAFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 286 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL Sbjct: 287 RI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 344 Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 S SR D D ++ + R++E RDI I G Sbjct: 345 STSRQLDPLVVGQDHYDTARAVQGTLQRYKELRDIIAILG 384 >gi|134096552|ref|YP_001101627.1| F0F1 ATP synthase subunit beta [Herminiimonas arsenicoxydans] gi|166201712|sp|A4GAG9|ATPB_HERAR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|133740455|emb|CAL63506.1| ATP synthase subunit beta (ATPase subunit beta) (ATP synthase F1 sector subunit beta) [Herminiimonas arsenicoxydans] Length = 466 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 104/340 (30%), Positives = 164/340 (48%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 IV +G + + G ++ + G P GR+++ LG PID + + + Sbjct: 49 IVRTIALGTSDGLRRGMIIQNTGNPITVPVGKATLGRIMDVLGNPIDECGPVSH-ERTAS 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P + +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 108 IHRKAPAYDELSPSQDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 167 Query: 184 SDCFDKVIISLVGERGREVREF--------IEDYLGDNLKKSVVVVATSDESPILRKMAP 235 + V VGER RE +F + D K +V +E P R Sbjct: 168 AHSGLSVFAG-VGERTREGNDFYHEMADAKVVDLENPENSKVAMVYGQMNEPPGNRLRVA 226 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT +T+AE F +G +VL +D+I RF + E++ G +P A GY ++ E+ RL E Sbjct: 227 LTGLTMAEAFRDEGKDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGRLQE 286 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL Sbjct: 287 RI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLD 344 Query: 356 SVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 S SR D D ++ + R++E RDI I G Sbjct: 345 STSRQLDPLVVGQDHYDTARAVQGTLQRYKELRDIIAILG 384 >gi|183206584|gb|ACC54490.1| ATP synthase beta subunit [Campanula hierapetrae] Length = 497 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 49 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 108 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 109 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 165 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 166 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 224 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 225 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 284 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 285 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 342 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 343 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 402 Query: 389 IRLIGG 394 I I G Sbjct: 403 IITILG 408 >gi|124516445|gb|EAY57953.1| ATP synthase F1, beta subunit [Leptospirillum rubarum] Length = 463 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 163/308 (52%), Gaps = 27/308 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNR-QRVEKGFKTGIRVIDIFTP 157 GR+++ LG P+D G ++ E + + PP + F+TGI+V+D+ P Sbjct: 83 LGRMMDVLGNPVDE-----AGPITAEARRSIHREPPGFEELASATEVFETGIKVVDLIAP 137 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL 214 G + G+F G+G+GK+ ++ R+ + + + VGER RE + L + + Sbjct: 138 FAKGGKTGLFGGAGVGKTVIIMELIRNIAMEHGGFSVFAGVGERTREGND-----LWNEM 192 Query: 215 KKSVVVVATS------DESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 K+S V+ TS +E P +R LT +T AEYF + +VL +D+I RF + Sbjct: 193 KESKVIDKTSLVYGQMNEPPGVRLRVALTGLTQAEYFRDEERRDVLFFIDNIFRFTLAGA 252 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + +KG+IT+V +V V D+ DP + Sbjct: 253 EVSALLGRMPSAVGYQPTLAVEMGGLQERI--TSTKKGSITSVQAVYVPADDLTDPAPAT 310 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 S LD +VL+R +AE G YP VDPL S SR+ D +E V+ ++ + ++++ Sbjct: 311 TFSHLDATVVLSRQIAELGIYPAVDPLDSTSRILDPMIVGEEHYGVARAVQKTLQKYKDL 370 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 371 QDIIAILG 378 >gi|226944078|ref|YP_002799151.1| F0F1 ATP synthase subunit beta [Azotobacter vinelandii DJ] gi|226719005|gb|ACO78176.1| ATP synthase F1, beta subunit [Azotobacter vinelandii DJ] Length = 473 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 107/377 (28%), Positives = 176/377 (46%), Gaps = 15/377 (3%) Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL 83 G +S++ VT + +GD + + + L ++ +LD + + + L Sbjct: 8 GLVSAVRGAVIDVTFPAGLPPIGDALAILRDDGEPLLAEVQAHLDARRVRAIALAATSGL 67 Query: 84 GDLVFH---WGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQR 140 V G R+ GR+++ G D L I PP + Sbjct: 68 PRGVMARTLGGPLRVPVGEAVLGRLLDVGGVVGDKGPPLPDDVPRRPIHRSPPPLAAQAA 127 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLV 195 + F TGI+VID+ TPL G + +F G+G+GK+ L+ +M R + + V Sbjct: 128 TSEPFATGIKVIDLLTPLVQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGIS--VFAGV 185 Query: 196 GERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVL 253 GER RE E + D L +V+V +E P R PLTA++IAEYF + NVL Sbjct: 186 GERSREGHEMLLDMRNSGVLPHTVLVYGQMNEPPGARWRVPLTALSIAEYFRDERRQNVL 245 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 L++D++ RF + E++ G LP GY ++ E+ L ERI +TA+ +V Sbjct: 246 LLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLADEVAALQERI--VSVGGVAVTAIEAV 303 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKL 372 V D+ DP ++ + +D +VL+R++A +G YP VDP+AS S L D A+ + Sbjct: 304 YVPADDFTDPAVTALAAHVDSMVVLSRAMAAQGMYPAVDPIASSSLLLDPLVVGAEHVAI 363 Query: 373 VSSLTHLIHRFEETRDI 389 + +I + +D+ Sbjct: 364 ATEARRIIEHYRSLQDV 380 >gi|170293963|gb|ACB13075.1| ATP synthase beta subunit [Bracteacoccus terrestris] Length = 366 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + ++ I P ++ F+TGI+V+D+ P G Sbjct: 22 GRIFNVLGEPVDQMGPVQTKE-TLPIHRSSPAFVDLDTTLSIFETGIKVVDLLAPYRRGG 80 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 81 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYCEMKESGVIVEKN 140 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + E Sbjct: 141 LSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 198 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 199 VSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 256 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W EK ++ + R++E Sbjct: 257 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYDCAQNVKKTLQRYKEL 315 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 316 QDIIAILG 323 >gi|103487769|ref|YP_617330.1| F0F1 ATP synthase subunit beta [Sphingopyxis alaskensis RB2256] gi|118573753|sp|Q1GQS5|ATPB_SPHAL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|98977846|gb|ABF53997.1| ATP synthase F1, beta subunit [Sphingopyxis alaskensis RB2256] Length = 513 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 93/311 (29%), Positives = 157/311 (50%), Gaps = 21/311 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + D++ I +K P +++ TGI+VID+ P G Sbjct: 121 LGRILNVIGEPIDERGPV-NSDMTAPIHAKAPEFVDQSTEASILVTGIKVIDLIAPYAKG 179 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + +S+ VGER RE + ++L + Sbjct: 180 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKD 239 Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 K +V +E P R L+ +T+AEYF +G +VL +D+I RF Sbjct: 240 ADGNPTPDGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQ 299 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 300 AGSEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTTKGSITSVQAIYVPADDLTDPA 357 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD L+R+++E G YP VDPL S SR+ A E + + + ++ Sbjct: 358 PATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRVLTPAIVGQEHYETARRVQETLQKY 417 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 418 KSLQDIIAILG 428 >gi|256842066|ref|ZP_05547571.1| ATP synthase F1, beta subunit [Parabacteroides sp. D13] gi|256736382|gb|EEU49711.1| ATP synthase F1, beta subunit [Parabacteroides sp. D13] Length = 505 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PIDG L K D ++ I + P + ++ TGI+VID+ P G Sbjct: 94 GRLMNVTGDPIDGMAQLTK-DGALPIHREPPKFEDLTTTQEVLYTGIKVIDLLEPYAKGG 152 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ +++ F + + VGER RE +RE I+ + Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ KKS+ +V +E P R L+ +TIAE F K Sbjct: 211 GEEFKKSMEAGNWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDKA 270 Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + +K Sbjct: 271 SEGERKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388 Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389 E + ++ R +E +DI Sbjct: 389 IVGKEHYDTAQRVKQILQRNKELQDI 414 >gi|154276988|ref|XP_001539339.1| ATP synthase beta chain, mitochondrial precursor [Ajellomyces capsulatus NAm1] gi|150414412|gb|EDN09777.1| ATP synthase beta chain, mitochondrial precursor [Ajellomyces capsulatus NAm1] Length = 522 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K + I ++ P + + + TGI+V+D+ P G Sbjct: 134 LGRIMNVTGDPIDERGPI-KHTMKAPIHAEAPEYVEQATSAEVLVTGIKVVDLLAPYARG 192 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 193 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 251 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 252 DGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 311 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 312 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 369 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D +E V++ + ++ ++ +DI Sbjct: 370 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYNVATRVQQMLQEYKSLQDI 429 Query: 390 RLIGG 394 I G Sbjct: 430 IAILG 434 >gi|121713468|ref|XP_001274345.1| ATP synthase F1, beta subunit, putative [Aspergillus clavatus NRRL 1] gi|119402498|gb|EAW12919.1| ATP synthase F1, beta subunit, putative [Aspergillus clavatus NRRL 1] Length = 520 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 157/313 (50%), Gaps = 16/313 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 +I GR++N G PID + K I ++ P + + + TGI+V+D Sbjct: 122 KIPVGPATLGRIVNVTGDPIDERGPI-KATKFAPIHAEAPEFIEQSTSAEILVTGIKVVD 180 Query: 154 IFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 + P G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 181 LLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEM 239 Query: 210 LG------DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF Sbjct: 240 QETGVIKLDGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRF 299 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ D Sbjct: 300 TQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTD 357 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VL+R ++E G YP VDPL S SR+ D +E + + + ++ Sbjct: 358 PAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYQTATRVQQMLQ 417 Query: 382 RFEETRDIRLIGG 394 ++ +DI I G Sbjct: 418 EYKSLQDIIAILG 430 >gi|220910365|ref|YP_002485676.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 7425] gi|254808143|sp|B8HP55|ATPB_CYAP4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|219866976|gb|ACL47315.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 7425] Length = 485 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 155/306 (50%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + + I P N + F+TGI+V+D+ TP G Sbjct: 97 LGRIFNVLGEPVDEKGTV-NSETTFPIHRAAPAFTNLETKPSVFETGIKVVDLLTPYRRG 155 Query: 162 QRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ ++ + + VGER RE + + + N+ Sbjct: 156 GKIGLFGGAGVGKTVIMMELINNIATKHGGVSVFGGVGERTREGNDLYNEMIESNVINKD 215 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R L+A+T+AEYF +VLL +D+I RF + E+ Sbjct: 216 DPSQSKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 275 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 SALLGRMPSAVGYQPTLGTDVGELQERI--TSTNEGSITSIQAVYVPADDLTDPAPATTF 333 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LDG VL+R LA +G YP VDPL S S + + K ++ + R++E +D Sbjct: 334 AHLDGTTVLSRGLAAKGIYPAVDPLGSTSTMLQPGIVGEAHYKTARAVQATLQRYKELQD 393 Query: 389 IRLIGG 394 I I G Sbjct: 394 IIAILG 399 >gi|229587163|ref|YP_002845664.1| F0F1 ATP synthase subunit beta [Rickettsia africae ESF-5] gi|259585450|sp|C3PLT1|ATPB_RICAE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|228022213|gb|ACP53921.1| ATP synthase beta chain [Rickettsia africae ESF-5] Length = 473 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149 RI GR++N +G+PIDG KGD+ +S K P Q E+ TGI Sbjct: 80 RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206 +VID+ P G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194 Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256 + + + K +V +E P R L+ +TIAE F ++G +VL + Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVP 312 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 373 VQQVLQTYKSLQDIITILG 391 >gi|71370874|gb|AAZ30666.1| ATP synthase beta subunit [Leucosolenia sp. KP-2005] Length = 404 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 159/306 (51%), Gaps = 18/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + S I ++ P ++ ++ +TGI+V+D+ P G Sbjct: 64 LGRIMNVIGEPIDERGPI-DAKASAPIHAEAPEFVDMSVEQEILETGIKVVDLLAPYAKG 122 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + + Sbjct: 123 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIVGGVIVL 181 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269 K +V +E P R LT +T+AEYF K G +VLL +D+I RF + E+ Sbjct: 182 DKPGSKVSLVYGQMNEPPGARARVALTGLTVAEYFRDKEGQDVLLFIDNIFRFTQAGSEV 241 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI E G+IT+V ++ V D+ DP + Sbjct: 242 SALLGRIPSAVGYQPTLATDMGSMQERITTPE---GSITSVQAIYVPADDLTDPAPATTF 298 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D E ++ S+ ++ ++ +D Sbjct: 299 AHLDATTVLSRGIAELGIYPAVDPLDSTSRILDPNTVGMEHYTIARSVQKILQDYKSLQD 358 Query: 389 IRLIGG 394 I I G Sbjct: 359 IIAILG 364 >gi|158425749|ref|YP_001527041.1| F0F1 ATP synthase subunit beta [Azorhizobium caulinodans ORS 571] gi|190358256|sp|A8HS10|ATPB_AZOC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|158332638|dbj|BAF90123.1| ATP synthase F1 beta subunit [Azorhizobium caulinodans ORS 571] Length = 478 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 95/315 (30%), Positives = 157/315 (49%), Gaps = 26/315 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR++N +G+ +D LG G+ I + P + + TGI+V+D+ P Sbjct: 84 ATLGRIMNVIGEAVD---ELGPVVGEAKRAIHQQAPSYSEQSTEAEMLVTGIKVVDLLAP 140 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V VGER RE + + + Sbjct: 141 YSKGGKIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMIESK 199 Query: 214 LK-------------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 + K +V +E P R LT +T+AE+F +G +VL +D+I Sbjct: 200 VNVDPHENNGSSAGSKCALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIF 259 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ Sbjct: 260 RFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDL 317 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHL 379 DP + + LD VL+RS+AE+G YP VDPL S SR+ +E V+ + Sbjct: 318 TDPAPAASFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRILSPLVIGEEHYNVARQVQQT 377 Query: 380 IHRFEETRDIRLIGG 394 + R++ +DI I G Sbjct: 378 LQRYKALQDIIAILG 392 >gi|153834312|ref|ZP_01986979.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01] gi|148869320|gb|EDL68334.1| ATP synthase F1, beta subunit [Vibrio harveyi HY01] Length = 467 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 GR++N LG ID +G ++ + + P+ Q E +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGEIGAEEVYS--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVE 203 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 204 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + + Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD +VLNR++A G YP +DPL S SR D E + + + R++E +DI Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQQTLQRYKELKDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|23503619|dbj|BAC20406.1| ATP synthase beta-subunit [Carteria crucifera] Length = 376 Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGPVETQE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|284166612|ref|YP_003404891.1| ATP synthase, B subunit [Haloterrigena turkmenica DSM 5511] gi|284016267|gb|ADB62218.1| ATP synthase, B subunit [Haloterrigena turkmenica DSM 5511] Length = 471 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 87/277 (31%), Positives = 146/277 (52%), Gaps = 17/277 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G PIDG + D +I+ K +R+ E+ +TG+ ID L G Sbjct: 84 LGRVLDGSGNPIDGGPEIVP-DERHDIVGKAINPYSREYPEEFIQTGVSAIDGMNTLVRG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD--------------KVIISLVGERGREVREFIE 207 Q++ +F+ SG+ + L AR V+ +G E EF++ Sbjct: 143 QKLPIFSASGLPHNDLALQIARQATVPEEDEGGDGDEGSEFAVVFGAMGITAEEANEFMD 202 Query: 208 DYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 D+ L++SVV + +D+ + R++ P A+T AEY + + D +VL+IL +T + + Sbjct: 203 DFERTGALERSVVFMNLADDPAVERQVTPRLALTTAEYLAFEKDYHVLVILTDMTNYCEA 262 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 +REI E+P RGYP ++++L +L ER G E ++G++T + + + GD+ PI Sbjct: 263 LREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGKEGSVTQIPILTMPGDDETHPIP 322 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 D I +G I+++R L +G PPV+ L S+SRL D Sbjct: 323 DLTGYITEGQIMMDRDLNSQGIEPPVNVLPSLSRLMD 359 >gi|187735013|ref|YP_001877125.1| ATP synthase F1, beta subunit [Akkermansia muciniphila ATCC BAA-835] gi|187425065|gb|ACD04344.1| ATP synthase F1, beta subunit [Akkermansia muciniphila ATCC BAA-835] Length = 473 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 163/312 (52%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIF 155 C GR+ N LG+ +D +G LS M + PP + + +TGI+VID+ Sbjct: 90 CVLGRIFNVLGEAVDE-----RGGLSCAGMKSIHRGAPPLDEQSTSTEVLETGIKVIDLI 144 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD 212 P G +IG F G+G+GK+ L+ + + +S+ VGER RE + + + Sbjct: 145 CPFLKGGKIGAFGGAGVGKTVLIMELINNIAKARSGLSVFAGVGERTREGNDLYNEMIES 204 Query: 213 ---NLKKS-----VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 NL+K +V +E P R L+A+T+AEYF + +VLL +D+I RF+ Sbjct: 205 GVINLEKPEESKVALVYGQMNEPPGARLRVALSALTMAEYFRDEEHKDVLLFIDNIFRFS 264 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 265 QAGSEVSALLGRTPSAVGYQPNLAEEMADLQERI--TSTKHGSITSMQAVYVPADDLTDP 322 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD +VL RSLA +G +P V+PL+S S+ LA + + ++ + ++ R Sbjct: 323 APATTFAHLDSTVVLERSLAAQGLFPAVEPLSSTSKALAPEIVGNEHYEVARGVQMVLQR 382 Query: 383 FEETRDIRLIGG 394 +++ +D+ I G Sbjct: 383 YKDLQDMIAILG 394 >gi|118594197|ref|ZP_01551544.1| F0F1 ATP synthase subunit beta [Methylophilales bacterium HTCC2181] gi|118439975|gb|EAV46602.1| F0F1 ATP synthase subunit beta [Methylophilales bacterium HTCC2181] Length = 474 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 157/305 (51%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + I K P + + +TGI+VID+ P G Sbjct: 93 GRIMDVLGRPIDEVGEIDSKEFR-SIHQKAPAFNDLSPSIELLETGIKVIDLMCPFAKGG 151 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 ++G+F G+G+GK+ L++ A+ V VGER RE +F + Sbjct: 152 KVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMAEAGVIQLK 210 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 N+K+S V V +E P R L+ +T+AE F +G +VL +D+I R+ + E++ Sbjct: 211 NMKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 270 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 271 ALLGRMPSAVGYQPTLADEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQ 328 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D +E V+ ++ + R++E RDI Sbjct: 329 HLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGEEHYSVARAVQSTLQRYKELRDI 388 Query: 390 RLIGG 394 I G Sbjct: 389 IAILG 393 >gi|238650821|ref|YP_002916676.1| F0F1 ATP synthase subunit beta [Rickettsia peacockii str. Rustic] gi|259585451|sp|C4K227|ATPB_RICPU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|238624919|gb|ACR47625.1| F0F1 ATP synthase subunit beta [Rickettsia peacockii str. Rustic] Length = 473 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149 RI GR++N +G+PIDG KGD+ +S K P Q E+ TGI Sbjct: 80 RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206 +VID+ P G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194 Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256 + + + K +V +E P R L+ +TIAE F ++G +VL + Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVP 312 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 373 VQQVLQTYKSLQDIITILG 391 >gi|15608450|ref|NP_215826.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis H37Rv] gi|15840761|ref|NP_335798.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis CDC1551] gi|31792503|ref|NP_854996.1| F0F1 ATP synthase subunit beta [Mycobacterium bovis AF2122/97] gi|121637239|ref|YP_977462.1| F0F1 ATP synthase subunit beta [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148661098|ref|YP_001282621.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis H37Ra] gi|148822528|ref|YP_001287282.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis F11] gi|167969638|ref|ZP_02551915.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis H37Ra] gi|215403152|ref|ZP_03415333.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 02_1987] gi|215410949|ref|ZP_03419757.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 94_M4241A] gi|215426637|ref|ZP_03424556.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis T92] gi|215430196|ref|ZP_03428115.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis EAS054] gi|215445488|ref|ZP_03432240.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis T85] gi|218753018|ref|ZP_03531814.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis GM 1503] gi|219557211|ref|ZP_03536287.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis T17] gi|224989714|ref|YP_002644401.1| FOF1 ATP synthase subunit beta [Mycobacterium bovis BCG str. Tokyo 172] gi|253799644|ref|YP_003032645.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis KZN 1435] gi|254231568|ref|ZP_04924895.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis C] gi|254364207|ref|ZP_04980253.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis str. Haarlem] gi|254550318|ref|ZP_05140765.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260186249|ref|ZP_05763723.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis CPHL_A] gi|260200363|ref|ZP_05767854.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis T46] gi|260204568|ref|ZP_05772059.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis K85] gi|289442749|ref|ZP_06432493.1| ATP synthase F1, beta subunit [Mycobacterium tuberculosis T46] gi|289446905|ref|ZP_06436649.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis CPHL_A] gi|289554900|ref|ZP_06444110.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis KZN 605] gi|289569322|ref|ZP_06449549.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis T17] gi|289573973|ref|ZP_06454200.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis K85] gi|289745056|ref|ZP_06504434.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 02_1987] gi|289749867|ref|ZP_06509245.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis T92] gi|289753387|ref|ZP_06512765.1| ATP synthase F1 sector subunit beta [Mycobacterium tuberculosis EAS054] gi|289757410|ref|ZP_06516788.1| ATP synthase F1 sector subunit beta [Mycobacterium tuberculosis T85] gi|289761465|ref|ZP_06520843.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis GM 1503] gi|294994866|ref|ZP_06800557.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 210] gi|297633862|ref|ZP_06951642.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis KZN 4207] gi|297730849|ref|ZP_06959967.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis KZN R506] gi|298524814|ref|ZP_07012223.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 94_M4241A] gi|306775482|ref|ZP_07413819.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu001] gi|306781607|ref|ZP_07419944.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu002] gi|306784035|ref|ZP_07422357.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu003] gi|306788397|ref|ZP_07426719.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu004] gi|306792725|ref|ZP_07431027.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu005] gi|306797130|ref|ZP_07435432.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu006] gi|306803010|ref|ZP_07439678.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu008] gi|306807200|ref|ZP_07443868.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu007] gi|306967399|ref|ZP_07480060.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu009] gi|306971591|ref|ZP_07484252.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu010] gi|307079306|ref|ZP_07488476.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu011] gi|307083874|ref|ZP_07492987.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu012] gi|313658182|ref|ZP_07815062.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis KZN V2475] gi|54036784|sp|P63678|ATPB_MYCBO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|54040854|sp|P63677|ATPB_MYCTU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166201718|sp|A1KI98|ATPB_MYCBP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166201719|sp|A5U209|ATPB_MYCTA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254808158|sp|C1AMV4|ATPB_MYCBT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|1322434|emb|CAA97743.1| PROBABLE ATP SYNTHASE BETA CHAIN ATPD [Mycobacterium tuberculosis H37Rv] gi|13880953|gb|AAK45612.1| ATP synthase F1, beta subunit [Mycobacterium tuberculosis CDC1551] gi|31618092|emb|CAD94203.1| PROBABLE ATP SYNTHASE BETA CHAIN ATPD [Mycobacterium bovis AF2122/97] gi|121492886|emb|CAL71357.1| Probable ATP synthase beta chain atpD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124600627|gb|EAY59637.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis C] gi|134149721|gb|EBA41766.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis str. Haarlem] gi|148505250|gb|ABQ73059.1| ATP synthase beta chain AtpD [Mycobacterium tuberculosis H37Ra] gi|148721055|gb|ABR05680.1| ATP synthase beta subunit atpD [Mycobacterium tuberculosis F11] gi|224772827|dbj|BAH25633.1| FOF1 ATP synthase subunit beta [Mycobacterium bovis BCG str. Tokyo 172] gi|253321147|gb|ACT25750.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis KZN 1435] gi|289415668|gb|EFD12908.1| ATP synthase F1, beta subunit [Mycobacterium tuberculosis T46] gi|289419863|gb|EFD17064.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis CPHL_A] gi|289439532|gb|EFD22025.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis KZN 605] gi|289538404|gb|EFD42982.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis K85] gi|289543076|gb|EFD46724.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis T17] gi|289685584|gb|EFD53072.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 02_1987] gi|289690454|gb|EFD57883.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis T92] gi|289693974|gb|EFD61403.1| ATP synthase F1 sector subunit beta [Mycobacterium tuberculosis EAS054] gi|289708971|gb|EFD72987.1| ATP synthase beta chain atpD [Mycobacterium tuberculosis GM 1503] gi|289712974|gb|EFD76986.1| ATP synthase F1 sector subunit beta [Mycobacterium tuberculosis T85] gi|298494608|gb|EFI29902.1| F0F1 ATP synthase subunit beta [Mycobacterium tuberculosis 94_M4241A] gi|308216029|gb|EFO75428.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu001] gi|308325569|gb|EFP14420.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu002] gi|308331267|gb|EFP20118.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu003] gi|308335083|gb|EFP23934.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu004] gi|308338891|gb|EFP27742.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu005] gi|308342505|gb|EFP31356.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu006] gi|308346439|gb|EFP35290.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu007] gi|308350310|gb|EFP39161.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu008] gi|308355011|gb|EFP43862.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu009] gi|308358959|gb|EFP47810.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu010] gi|308362840|gb|EFP51691.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu011] gi|308366507|gb|EFP55358.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis SUMu012] gi|323720267|gb|EGB29366.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis CDC1551A] gi|326902932|gb|EGE49865.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis W-148] gi|328459390|gb|AEB04813.1| ATP synthase subunit beta atpD [Mycobacterium tuberculosis KZN 4207] Length = 486 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 160/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + G+ I K P + + +TG++V+D+ TP G Sbjct: 107 GHVFNALGDCLD-EPGYGEKFEHWSIHRKPPAFEELEPRTEMLETGLKVVDLLTPYVRGG 165 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK + Sbjct: 166 KIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELAEANVLKDTA 225 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AE+F +G +VLL +D+I RF + E++T G +P Sbjct: 226 LVFGQMDEPPGTRMRVALSALTMAEWFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLGRMP 285 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 286 SAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDATTE 343 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++ +G +P VDPLAS S + D + DE ++ + ++ R+++ +DI I G Sbjct: 344 LSRAVFSKGIFPAVDPLASSSTILDPSVVGDEHYRVAQEVIRILQRYKDLQDIIAILG 401 >gi|46909235|gb|AAT06135.1| ATP synthase beta subunit [Chaetopterus sp. KJP-2000] Length = 427 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 92/280 (32%), Positives = 151/280 (53%), Gaps = 18/280 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN +G+PID + + I + P ++ ++ TGI+V+D+ P G Sbjct: 65 GRIINVIGEPIDERGPVNSKH-QLAIHQEAPEFIDMSVEQEILVTGIKVVDLLAPYSKGG 123 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL-------- 210 +IG+F G+G+G++ L+ + A++ V VGER RE + D + Sbjct: 124 KIGLFGGAGVGRTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHDMITTGVIDLK 182 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 G+N K S+V +E P R LT +T+AE+F +G +VLL +D+I RF + E+ Sbjct: 183 GNNSKVSLVY-GQMNEPPGARARVCLTGLTVAEFFRDHEGQDVLLFIDNIFRFTQAGSEV 241 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 242 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 299 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + LD + VL+R +AE G YP VDPL S SR+ D+ E Sbjct: 300 AHLDANTVLSRGIAELGIYPAVDPLDSNSRILDRNVVGSE 339 >gi|315320486|ref|YP_004072542.1| ATP synthase CF1 subunit beta [Thalassiosira oceanica CCMP1005] gi|283568959|gb|ADB27496.1| ATP synthase CF1 subunit beta [Thalassiosira oceanica CCMP1005] Length = 474 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N +G+P+D GD SL D ++ I + P + F+TGI+V+D+ P Sbjct: 90 LGRIFNVIGEPVDEQGDVSL---DETLPIHREAPAFTELETKPSIFETGIKVVDLLAPYR 146 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE + E+ Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVI 205 Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 206 NSNNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAG 265 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 266 SEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPA 323 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R+LA +G YP VDPL S S + +E + ++ + R++E Sbjct: 324 TTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVTEEHYAIAENVKETLQRYKE 383 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 384 LQDIIAILG 392 >gi|260435742|ref|ZP_05789712.1| ATP synthase F1, beta subunit [Synechococcus sp. WH 8109] gi|260413616|gb|EEX06912.1| ATP synthase F1, beta subunit [Synechococcus sp. WH 8109] Length = 487 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 158/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + I P + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVNT-SATAPIHRDAPNITELETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ER+ + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERV--ASTVEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VLNR+LA +G YP VDPL S S + A DE + ++ + R++E Sbjct: 334 TFAHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|258541222|ref|YP_003186655.1| F0F1 ATP synthase subunit beta [Acetobacter pasteurianus IFO 3283-01] gi|256632300|dbj|BAH98275.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-01] gi|256635357|dbj|BAI01326.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-03] gi|256638412|dbj|BAI04374.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-07] gi|256641466|dbj|BAI07421.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-22] gi|256644521|dbj|BAI10469.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-26] gi|256647576|dbj|BAI13517.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-32] gi|256650629|dbj|BAI16563.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653620|dbj|BAI19547.1| ATP synthase F1 beta subunit [Acetobacter pasteurianus IFO 3283-12] Length = 490 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 19/308 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + + I + P ++ + TGI+V+D+ P G Sbjct: 101 GRILNVIGEPIDEKGPIPTSRRA-PIHRQAPAFEDQAAASEILMTGIKVVDLLCPYLKGG 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-------LGD 212 +IG+F G+G+GK+ ++ + +S+ VGER RE + + LG+ Sbjct: 160 KIGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYYEMQDAGVIKLGE 219 Query: 213 NLK----KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 N K +V +E P R LT +T+AEYF + +VL +D+I RF + Sbjct: 220 NGSTEGSKVALVFGQMNEPPGARARVALTGLTLAEYFRDEENQDVLFFVDNIFRFTQAGS 279 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + Sbjct: 280 EVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAA 337 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD VLNRS+AE G YP VDPL S SR D E V+ + ++ ++ Sbjct: 338 TFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRALDPQIVGQEHYDVACEVQRILQTYKSL 397 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 398 QDIIAILG 405 >gi|170293965|gb|ACB13076.1| ATP synthase beta subunit [Mychonastes jurisii] Length = 366 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + S+ I P ++ F+TGI+V+D+ P Sbjct: 19 ATLGRIFNVLGEPVDNMGPV-QNQESLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 77 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 78 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 137 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R L+A+T+AEYF + +VL +D+I RF + Sbjct: 138 EKNLADS--KVALVYGQMNEPPGARMRVALSALTMAEYFRDANKQDVLFFVDNIFRFVQA 195 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 196 GAEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 253 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W EK ++ + R+ Sbjct: 254 ATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGEKHYGCAQNVKKTLQRY 312 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 313 KELQDIIAILG 323 >gi|113910948|gb|ABI48206.1| ATPase beta subunit [Araucaria araucana] Length = 456 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 109/371 (29%), Positives = 181/371 (48%), Gaps = 33/371 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K+ + GQ+I++ ++ V + + + G VF G + A GR Sbjct: 12 KDKNTAGQLIQVTCEVQQLLGNNKVRAIAMSATDGLMRGMKVFDTGAPLSVPVGAATLGR 71 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D LG + + + + PA + + F+TGI+V+D+ P G Sbjct: 72 IFNVLGEPVD---DLGPVNARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGG 128 Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ L+ + V + S VGER RE + + + Sbjct: 129 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQN 188 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 189 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 248 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 249 ALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 306 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + + +E + + + R++E +DI Sbjct: 307 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDI 366 Query: 390 RLIGGYRPGVD 400 I PG+D Sbjct: 367 IAI----PGLD 373 >gi|294341481|emb|CAZ89898.1| ATP synthase subunit beta, sodium ion specific (Na(+)-translocating ATPase subunit beta) [Thiomonas sp. 3As] Length = 471 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 101/333 (30%), Positives = 166/333 (49%), Gaps = 11/333 (3%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G LV + G ++ GR+++ LG+PID + + Sbjct: 61 VVRTIAMGSSDGLRRGMLVNNTGHSIQVPVGPAVLGRIMDVLGRPIDEAGPIATEE-RRS 119 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I P + +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 120 IHQSAPKFDDLSPSVDLLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 179 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242 V VGER RE +F + N L K +V +E P R LT +T+A Sbjct: 180 QHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKVGMVFGQMNEPPGNRLRVALTGLTMA 238 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E F +G ++L +D+I R+ + E++ G +P A GY ++ E+ +L ERI + Sbjct: 239 ERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLADEMGKLQERI--TST 296 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 297 KTGSITSIQAVYVPADDLTDPSPATTFNHLDATVVLSRDIASLGIYPAVDPLDSTSRQID 356 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E ++ ++ R++E RDI I G Sbjct: 357 PNVIGEEHYSTTRAVQGILQRYKELRDIIAILG 389 >gi|300313646|ref|YP_003777738.1| F0F1-type ATP synthase subunit beta [Herbaspirillum seropedicae SmR1] gi|124483594|emb|CAM32670.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum seropedicae] gi|300076431|gb|ADJ65830.1| F0F1-type ATP synthase, beta subunit protein [Herbaspirillum seropedicae SmR1] Length = 466 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 154/308 (50%), Gaps = 17/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG PID + + + I K P ++ +TGI+VID+ P Sbjct: 81 ATLGRIMDVLGNPIDECGPVSH-EQTASIHRKAPAYDELSPSQELLETGIKVIDLVCPFA 139 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREF--------IE 207 G ++G+F G+G+GK+ L++ A++ V VGER RE +F + Sbjct: 140 KGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMAEAKVV 198 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 D K +V +E P R LT +TIAE F +G +VL +D+I R+ + Sbjct: 199 DLENPTNSKVAMVYGQMNEPPGNRLRVALTGLTIAEGFRDEGKDVLFFVDNIYRYTLAGT 258 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 259 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPAT 316 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD +VL+R +A G YP VDPL S SR D E + ++ + R++E Sbjct: 317 TFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQVVGQEHYETARAVQGTLQRYKEL 376 Query: 387 RDIRLIGG 394 RDI I G Sbjct: 377 RDIIAILG 384 >gi|112791362|gb|ABI21951.1| ATP synthase beta subunit [Erwinia chrysanthemi] Length = 344 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 89/287 (31%), Positives = 149/287 (51%), Gaps = 8/287 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+P+D +G+ + I P ++ +TGI+VID+ P G Sbjct: 61 GRIMNVLGEPVDMKGPIGEEE-RWAIHRAAPTYEELSNSQELLETGIKVIDLICPFAKGG 119 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N + K Sbjct: 120 KVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVS 179 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 180 LVYGQMNEPPGSRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPS 239 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + LD + L Sbjct: 240 AVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVTL 297 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 +R +A G YP VDPL S SR D E V+ + ++ R++ Sbjct: 298 SRQIASLGIYPAVDPLDSTSRQLDPLIVGQEHYDVARGVQSILQRYQ 344 >gi|260061527|ref|YP_003194607.1| F0F1 ATP synthase subunit beta [Robiginitalea biformata HTCC2501] gi|88785659|gb|EAR16828.1| ATP synthase subunit B [Robiginitalea biformata HTCC2501] Length = 502 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 106/330 (32%), Positives = 164/330 (49%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG +L K G + I + P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGLGNLPKAGKDGLPIHREAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 208 -DYL------GDNLKK----------SVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+L G +LKK + V +E P R L+ +TIAEYF Sbjct: 210 DDFLHSMEEGGWDLKKVDKKAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD + VL+R +AE G YP VDPL S SR L + Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDANTVLSRKIAELGIYPAVDPLDSTSRILTPEI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + L+ R++E +DI I G Sbjct: 388 LGKEHYDCAQRVKELLQRYKELQDIIAILG 417 >gi|295658821|ref|XP_002789970.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb01] gi|226282053|gb|EEH37619.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb01] Length = 513 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K I ++ P + + + TGI+V+D+ P G Sbjct: 125 LGRIMNVTGDPIDERGPI-KHSKKAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 242 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 243 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 302 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 303 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 360 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D +E ++ + + ++ ++ +DI Sbjct: 361 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYEVATRVQQMLQEYKSLQDI 420 Query: 390 RLIGG 394 I G Sbjct: 421 IAILG 425 >gi|218441980|ref|YP_002380309.1| F0F1 ATP synthase subunit beta [Cyanothece sp. PCC 7424] gi|226740185|sp|B7KGV4|ATPB_CYAP7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|218174708|gb|ACK73441.1| ATP synthase F1, beta subunit [Cyanothece sp. PCC 7424] Length = 482 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D S+ + + I P + + K F+TGI+VID+ TP Sbjct: 94 STLGRIFNVLGEPVDEKGSVNVNE-TFPIHRPAPKLTDLETKPKVFETGIKVIDLLTPYR 152 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIEDYL-- 210 G +IG+F G+G+GK+ ++ + + VGER RE E IE + Sbjct: 153 QGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTREGNDLYNEMIESKVIN 212 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DN + S +V +E P R L+A+T+AEYF +VLL +D+I RF + Sbjct: 213 PDNPEDSKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 272 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 273 EVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 330 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + E K ++ + R++E Sbjct: 331 TFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQPNIVGQEHYKTARAVQSTLQRYKEL 390 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 391 QDIIAILG 398 >gi|162452720|ref|YP_001615087.1| F0F1 ATP synthase subunit beta [Sorangium cellulosum 'So ce 56'] gi|189081348|sp|A9F3R4|ATPB_SORC5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|161163302|emb|CAN94607.1| H(+)-transporting two-sector ATPase [Sorangium cellulosum 'So ce 56'] Length = 474 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 166/317 (52%), Gaps = 16/317 (5%) Query: 91 GRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGI 149 G+ + P C GR++N +G PID + ++ I + PP + + + F+TGI Sbjct: 78 GKPIMVPVGNECLGRILNVVGVPIDEAGPVHAKKVA-PIHREPPPFIEQSTKVEVFETGI 136 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----V 202 +VID+ P G +IG+F G+G+GK+ L+ + +S+ VGER RE Sbjct: 137 KVIDLIAPYRKGGKIGLFGGAGVGKTVLILELINNVAKAHGGVSVFAGVGERTREGNDLF 196 Query: 203 REFIEDYLGDN---LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDS 258 E E L D + K+ ++ +E P R L+A+ +AE+F +G +VLL +D+ Sbjct: 197 LEMSESKLADGSPVISKAALIYGQMNEPPGARSRVALSALAVAEHFRDEEGQDVLLFVDN 256 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +E+ ERI + KG++T+V ++ V D Sbjct: 257 IFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGAFQERI--TSTTKGSVTSVQAIYVPAD 314 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377 + DP + + LD VL+R+++E G YP VDPL S S + D ++ V+ + Sbjct: 315 DLTDPAPATAFAHLDATTVLSRAISELGIYPAVDPLDSNSTMLDPQIVGEKHYSVARRVQ 374 Query: 378 HLIHRFEETRDIRLIGG 394 + R+++ +DI I G Sbjct: 375 QTLQRYKDLQDIIAILG 391 >gi|150006935|ref|YP_001301678.1| F0F1 ATP synthase subunit beta [Parabacteroides distasonis ATCC 8503] gi|255016043|ref|ZP_05288169.1| F0F1 ATP synthase subunit beta [Bacteroides sp. 2_1_7] gi|298377360|ref|ZP_06987313.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_19] gi|166201723|sp|A6L8P2|ATPB_PARD8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|149935359|gb|ABR42056.1| ATP synthase beta chain [Parabacteroides distasonis ATCC 8503] gi|298265774|gb|EFI07434.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_19] Length = 505 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PIDG L K D ++ I + P + ++ TGI+VID+ P G Sbjct: 94 GRLMNVTGDPIDGMAQLTK-DGALPIHREPPKFEDLTTTQEVLYTGIKVIDLLEPYAKGG 152 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ +++ F + + VGER RE +RE I+ + Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ KKS+ +V +E P R L+ +TIAE F K Sbjct: 211 GEEFKKSMEAGNWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDKA 270 Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + +K Sbjct: 271 SEGERKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388 Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389 E + ++ R +E +DI Sbjct: 389 IVGKEHYDTAQRVKQILQRNKELQDI 414 >gi|25144756|ref|NP_498111.2| ATP synthase subunit family member (atp-2) [Caenorhabditis elegans] gi|21431750|sp|P46561|ATPB_CAEEL RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|17976515|gb|AAA19068.2| Atp synthase subunit protein 2 [Caenorhabditis elegans] Length = 538 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 18/273 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + + + I ++ P + ++ TGI+V+D+ P G Sbjct: 151 GRIMNVIGEPIDERGPIASKNFAA-IHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGG 209 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE D Sbjct: 210 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVIDLK 268 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 G N K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 269 GKNSKVSLVY-GQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 327 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 328 SALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 385 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + LD VL+R +AE YP VDPL S SR+ D Sbjct: 386 AHLDATTVLSRGIAELAIYPAVDPLDSTSRIMD 418 >gi|319940677|ref|ZP_08015019.1| ATP synthase subunit beta [Sutterella wadsworthensis 3_1_45B] gi|319805828|gb|EFW02595.1| ATP synthase subunit beta [Sutterella wadsworthensis 3_1_45B] Length = 467 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 105/335 (31%), Positives = 169/335 (50%), Gaps = 15/335 (4%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G E + G V GR + GR+++ LG+PID +G ++ Sbjct: 57 VVRTIAMGTSEGLRRGMKVETTGREISVPVGPKTLGRIMDVLGRPIDDCGPIGSEEI--R 114 Query: 128 IMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFA 182 + V P + +TGI+VID+ P G ++G+F G+G+GK+ L++ A Sbjct: 115 PIHNVAPKFDELSPSVDLLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIA 174 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN--LKKSVVVVATSDESPILRKMAPLTAVT 240 + V VGER RE +F + +G++ L K +V +E P R LT +T Sbjct: 175 KQYGGYSVFAG-VGERTREGNDFYHE-MGESKVLDKVAMVFGQMNEPPGNRLRVALTGLT 232 Query: 241 IAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 +AE F +G ++LL +D+I R+ + E++ G +P A GY ++ E+ +L ERI + Sbjct: 233 MAEAFRDEGRDILLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--A 290 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + G+IT++ +V V D+ DP + LD +VL+R +A G YP VDPL S SR Sbjct: 291 STKTGSITSIQAVYVPADDLTDPSPATTFGHLDATVVLSRDIAALGIYPAVDPLDSTSRQ 350 Query: 361 ADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 D E V+ + + R++E RDI I G Sbjct: 351 VDPNIIGLEHYTVARRVQETLQRYKELRDIIAILG 385 >gi|11559336|dbj|BAB18826.1| ATP synthase beta-subunit [Volvulina steinii] Length = 376 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + ++ I P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NLGNVFFEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|190358726|sp|A8F2U0|ATPB_RICM5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 473 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 25/319 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149 RI GR++N +G+PIDG KGD+ +S K P Q E+ TGI Sbjct: 80 RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206 +VID+ P G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194 Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256 + + + K +V +E P R L+ +TIAE F ++G +VL + Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVP 312 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 373 VQQVLQTYKSLQDIIAILG 391 >gi|315924554|ref|ZP_07920773.1| V-type ATP synthase, subunit B [Pseudoramibacter alactolyticus ATCC 23263] gi|315622084|gb|EFV02046.1| V-type ATP synthase, subunit B [Pseudoramibacter alactolyticus ATCC 23263] Length = 464 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 15/326 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 + Q +G+V+ I+ D +V + G +I F + S GRV + Sbjct: 32 IKQANGEKRIGRVLEIDGDAALVQLFETSQGLKIFDAKATFQGHGIELGVSRDMLGRVFD 91 Query: 108 ALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 +G+P D G D + + L + P A R + +TGI ID L GQ++ V Sbjct: 92 GMGRPKDDGPDIIAEKRLDINGAPMNPVA--RDYPAEFIQTGISAIDGLNTLVRGQKLPV 149 Query: 167 FAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218 F+GSG+ + L + AR S+ F V+ + +G E FI+D+ ++++V Sbjct: 150 FSGSGLPHAQLAAQIARQAKVLDNSEDF-AVVFAAIGITFEEADYFIKDFRKTGAIERAV 208 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 + + +++ + R P A+T AEY + + G +VL+IL IT +A S+RE++ E+P Sbjct: 209 LFMNYANDPAVERIATPRMAITCAEYLAYELGMHVLVILTDITNYAESLREVSAARKEVP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 RGYP ++++L L ER G +KG+IT + + + D+ PI D I +G I+ Sbjct: 269 GRRGYPGYLYTDLASLYERAGRIRGKKGSITQIPILSMPEDDITHPIPDLTGYITEGQII 328 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADK 363 L+R L G PP+D L S+SRL DK Sbjct: 329 LSRDLNMRGIRPPIDVLPSLSRLKDK 354 >gi|308473481|ref|XP_003098965.1| CRE-ATP-2 protein [Caenorhabditis remanei] gi|308267929|gb|EFP11882.1| CRE-ATP-2 protein [Caenorhabditis remanei] Length = 551 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 147/273 (53%), Gaps = 18/273 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 161 GRIMNVIGEPIDERGPIASKHFAA-IHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKGG 219 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE D Sbjct: 220 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVIDLK 278 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 G N K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 279 GKNSKVSLVY-GQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 337 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 338 SALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 395 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + LD VL+R +AE YP VDPL S SR+ D Sbjct: 396 AHLDATTVLSRGIAELAIYPAVDPLDSTSRIMD 428 >gi|257869472|ref|ZP_05649125.1| sodium-transporting two-sector ATPase [Enterococcus gallinarum EG2] gi|257803636|gb|EEV32458.1| sodium-transporting two-sector ATPase [Enterococcus gallinarum EG2] Length = 466 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 104/343 (30%), Positives = 167/343 (48%), Gaps = 13/343 (3%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ I D +V I G + + F + S GRV + LG+ DG Sbjct: 42 GQVLEIQEDKALVQIFEGTGGINLRESSVRFLGHPLELGVSEEMIGRVFDGLGRVKDGGS 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + + M+I +V M R ++ +TGI ID L GQ++ +F+GSG+ L Sbjct: 102 EI-FAEKRMDINGEVINPMARDYPDEFIQTGISSIDHLNTLVRGQKLPIFSGSGLPHKEL 160 Query: 178 LSMFARS----DCFD--KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 S AR D D V+ + +G E F+ED+ + +SVV + +++ I Sbjct: 161 ASQIARQAQVLDTEDDFAVVFAGIGITFEEAEYFMEDFRQTGAIDRSVVFMNLANDPAIE 220 Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R P A+T AEY + KG +VL+I+ +T + ++REI+ E+P RGYP +++ Sbjct: 221 RIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTN 280 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 L L ER G KG++T + + + D+ PI D I +G I+L+R L + G P Sbjct: 281 LSTLYERAGRLRGVKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKNGIQP 340 Query: 350 PVDPLASVSRLADKAWSADE--KKLVSSLTHLIHRFEETRDIR 390 P+D L S+SRL DK + K S++ L + + + + Sbjct: 341 PIDVLPSLSRLKDKGTGEGKTRKDHASTMNQLFSAYAQGKQAK 383 >gi|226287911|gb|EEH43424.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb18] Length = 513 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K I ++ P + + + TGI+V+D+ P G Sbjct: 125 LGRIMNVTGDPIDERGPI-KHSKKAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 242 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 243 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 302 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 303 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 360 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D +E ++ + + ++ ++ +DI Sbjct: 361 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYEVATRVQQMLQEYKSLQDI 420 Query: 390 RLIGG 394 I G Sbjct: 421 IAILG 425 >gi|183206684|gb|ACC54540.1| ATP synthase beta subunit [Campanula herminii] Length = 465 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 82 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 138 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 197 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 198 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 257 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 315 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 375 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 376 YKELQDIITILG 387 >gi|119221374|gb|ABL61892.1| ATP synthase beta-subunit [Cylindrocapsa geminella] Length = 395 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 160/310 (51%), Gaps = 26/310 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + ++ I PP ++ F+TGI+V+D+ P Sbjct: 39 GRIFNVLGEPVD---NLGPVETQETLPIHRTAPPFVDLDTRLSIFETGIKVVDLLAPYRR 95 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IE 207 G +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 96 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVE 155 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 L D+ K +V ++ P R LTA+T+ EYF +VL +D+I RF + Sbjct: 156 KNLSDS--KVALVYGQMNDPPGARMRVALTALTMGEYFRDINKQDVLFFIDNIFRFVQAG 213 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 214 AEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 271 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384 + + LD VL+R+LA +G YP V PL S S + + W EK S+ ++ R++ Sbjct: 272 TTFAHLDATTVLSRALASKGIYPAVSPLESTSTML-QPWIVGEKHYDCARSVQSILQRYK 330 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 331 ELQDIIAILG 340 >gi|4519334|dbj|BAA75582.1| ATP synthase beta-subunit [Volvulina compacta] Length = 376 Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVLVEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|183206680|gb|ACC54538.1| ATP synthase beta subunit [Campanula hawkinsiana] Length = 463 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 82 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 138 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 197 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 198 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 257 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 315 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 375 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 376 YKELQDIITILG 387 >gi|119350563|gb|ABL63232.1| AtpB [Trochiscia hystrix] Length = 392 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + ++ I + P ++ F+TGI+V+D+ P G Sbjct: 38 LGRIFNVLGEPVDNMGPVETQE-TLPIHRQAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 96 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 97 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 156 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 157 NLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 214 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W EK ++ + R++E Sbjct: 273 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEKHYDGAQNVKKTLQRYKE 331 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 332 LQDIIAILG 340 >gi|239946819|ref|ZP_04698572.1| ATP synthase F1, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|241068666|ref|XP_002408502.1| ATP synthase subunit alpha, sodium ion specific, putative [Ixodes scapularis] gi|215492490|gb|EEC02131.1| ATP synthase subunit alpha, sodium ion specific, putative [Ixodes scapularis] gi|239921095|gb|EER21119.1| ATP synthase F1, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 474 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 100/319 (31%), Positives = 162/319 (50%), Gaps = 25/319 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149 RI GR++N +G+PIDG KGD+ +S K P Q E+ TGI Sbjct: 80 RIPVGTEALGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTNQSTERNILVTGI 134 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206 +V+D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 135 KVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194 Query: 207 EDYLGD---NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256 + + NL+ K +V +E P R L+ +TIAE F ++G +VL + Sbjct: 195 HEMIDSGVINLEEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVP 312 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 373 VQQVLQTYKSLQDIIAILG 391 >gi|146271663|emb|CAL25313.1| atpD beta synthase chain [Pseudomonas umsongensis] Length = 284 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 91/286 (31%), Positives = 146/286 (51%), Gaps = 8/286 (2%) Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 LG PID + D I P + +TGI+VID+ P G ++G+F Sbjct: 1 LGNPIDEAGPIAT-DERWGIHRAAPSFAEQAGGNDLLETGIKVIDLVCPFAKGGKVGLFG 59 Query: 169 GSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224 G+G+GK+ + R+ + + + VGER RE +F + N L K +V Sbjct: 60 GAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQM 119 Query: 225 DESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 +E P R LT +T+AE F +G++VLL +D+I R+ + E++ G +P A GY Sbjct: 120 NEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQP 179 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 ++ E+ L ERI + ++G+IT++ +V V D+ DP + + LD +VL+R +A Sbjct: 180 TLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIAS 237 Query: 345 EGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 G YP VDPL S SR D D + +++ R++E +DI Sbjct: 238 LGIYPAVDPLDSTSRQLDPNVIGQDHYDTARGVQYVLQRYKELKDI 283 >gi|262384322|ref|ZP_06077457.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_33B] gi|262294025|gb|EEY81958.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_33B] Length = 505 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PIDG L K D ++ I + P + ++ TGI+VID+ P G Sbjct: 94 GRLMNVTGDPIDGMAQLTK-DGALPIHREPPKFEDLTTTQEVLYTGIKVIDLLEPYAKGG 152 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ +++ F + + VGER RE +RE I+ + Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ KKS+ +V +E P R L+ +TIAE F K Sbjct: 211 GEEFKKSMEAGNWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDKA 270 Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + +K Sbjct: 271 SEGERKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388 Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389 E + ++ R +E +DI Sbjct: 389 IVGKEHYDTAQRVKQILQRNKELQDI 414 >gi|183206546|gb|ACC54471.1| ATP synthase beta subunit [Campanula alliariifolia] Length = 487 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 111/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 39 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGSTLGR 98 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 99 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 155 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 214 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 215 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 274 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 275 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 332 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 333 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 392 Query: 389 IRLIGG 394 I I G Sbjct: 393 IITILG 398 >gi|207722132|ref|YP_002252570.1| atp synthase beta chain protein [Ralstonia solanacearum MolK2] gi|206587307|emb|CAQ17891.1| atp synthase beta chain protein [Ralstonia solanacearum MolK2] Length = 469 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 97/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I K P +TGI+VID+ P G Sbjct: 94 GRIMDVLGRPIDEAGPIA-CDEKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 152 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 153 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNVLDKV 211 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 212 AMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 271 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 272 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 329 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D E ++ + + R++E RDI I G Sbjct: 330 LSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAILG 387 >gi|310798044|gb|EFQ32937.1| ATP synthase F1 [Glomerella graminicola M1.001] Length = 517 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K + I ++ P +++ + TGI+V+D+ P G Sbjct: 129 LGRIMNVTGDPIDERGPI-KSSKRLPIHTEPPEFIDQSTTAEVLVTGIKVVDLLAPYARG 187 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 188 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETSVIQL 246 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 247 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 306 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 307 ALLGRIPSAVGYQPTLAIDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 364 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 365 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQDHYDTATRVQQILQEYKSLQDI 424 Query: 390 RLIGG 394 I G Sbjct: 425 IAILG 429 >gi|308274427|emb|CBX31026.1| ATP synthase subunit beta 1 [uncultured Desulfobacterium sp.] Length = 464 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 103/332 (31%), Positives = 160/332 (48%), Gaps = 10/332 (3%) Query: 65 INLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGD 123 INL V + +S GD V GR + A GR+ N G PID +L + Sbjct: 54 INLKTVRCIAITQARGLSRGDRVLDTGRPISVPVGADLLGRMFNVFGDPIDKKGALKQYK 113 Query: 124 LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFA 182 L I K R + F TGI++ID+ PL G + G+F G+G+GK+ L + M Sbjct: 114 LR-SIHKKSVSISERTTNTEIFHTGIKIIDLLAPLEKGGKAGLFGGAGVGKTVLIMEMIH 172 Query: 183 RSDCFDKVIISL--VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239 K I +GER RE E + L ++V+V +E P R + TA+ Sbjct: 173 NMASVHKGISVFCGIGERSREGEELYREINEVGVLDRAVLVFGQMNEQPGARFLVGHTAL 232 Query: 240 TIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 T+AEYF + +VL+++D+I RF + E++ G +P GY ++ +EL L ERI Sbjct: 233 TMAEYFRDDEHRDVLMLIDNIFRFVQAGSEVSGLIGRIPSRVGYQPTLATELAELEERI- 291 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + G IT++ +V V D+ DP A + IVL+R + +G YP VDPL S S Sbjct: 292 -CSTKAGAITSIQAVYVPADDFTDPAAVHTFGHMSSSIVLSRKMTTQGLYPSVDPLQSRS 350 Query: 359 RLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 ++ + + ++ + +E+ +DI Sbjct: 351 KMLTPGIAGERHYNTARAVRQTLAEYEDLKDI 382 >gi|183206650|gb|ACC54523.1| ATP synthase beta subunit [Adenophora divaricata] Length = 470 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 87 GATLGRIFNVLGEPID---NLGXVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 202 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 203 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 262 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 263 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 320 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 321 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 380 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 381 YKELQDIITILG 392 >gi|149278595|ref|ZP_01884731.1| F0F1 ATP synthase subunit beta [Pedobacter sp. BAL39] gi|149230590|gb|EDM35973.1| F0F1 ATP synthase subunit beta [Pedobacter sp. BAL39] Length = 501 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 111/362 (30%), Positives = 177/362 (48%), Gaps = 57/362 (15%) Query: 103 GRVINALGKPIDG----DDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N +G+ IDG D++ G+ + PP + E TGI+VID+ P Sbjct: 89 GRLFNVVGEAIDGINKVDNANGRP------IHNAPPRFDELSTESEVLFTGIKVIDLLEP 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE--- 207 G +IG+F G+G+GK+ L+ + +S+ VGER RE +REFIE Sbjct: 143 YAKGGKIGLFGGAGVGKTVLIMELVNNIAKAYAGLSVFAGVGERTREGNDLLREFIESGV 202 Query: 208 -----DYL--------------GDNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYF- 245 D+L + LK K+ +V +E P R L+ +T+AEYF Sbjct: 203 INYGEDFLHSMEKGGWDLSKVDTEKLKDSKATLVFGQMNEPPGARARVALSGLTVAEYFR 262 Query: 246 ----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 263 DGDGEGAGKDILFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TS 320 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 ++G+IT+V +V V D+ DP + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 321 TKRGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKISELGIYPAVDPLDSTSRIL 380 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFL 417 A DE + ++ R++E +DI I G+D + ++ VH+ + FL Sbjct: 381 SPAILGDEHYNTAQRVKEILQRYKELQDIIAI----LGMDELSEEDKLVVHRARRVQRFL 436 Query: 418 KQ 419 Q Sbjct: 437 SQ 438 >gi|91178122|gb|ABE27296.1| mitochondrial F-ATPase beta subunit [Pichia fermentans] Length = 337 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 105/310 (33%), Positives = 163/310 (52%), Gaps = 26/310 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTP 157 GR++N G P+D +G + + + PPA Q E + +TGI+V+D+ P Sbjct: 19 LGRILNVTGDPVDE-----RGPVXCKERRPIHQDPPAFVDQSTEAEVLETGIKVVDLLAP 73 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L++ A++ V VGER RE RE E Sbjct: 74 YARGGKIGLFGGAGVGKTVFIQELINNVAKAHGGFSVFTG-VGERTREGNDLYREMKETG 132 Query: 210 LGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 + NL+ K +V +E P R LT +TIAEYF +G +VLL +D+I RF + Sbjct: 133 V-INLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQA 191 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP Sbjct: 192 GSEVSALLGRIPSAVGYQPTLATDMGLLQERI--TTTKKGSVTSVQAVYVPADDLTDPAP 249 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SRL D A E V++ + + ++ Sbjct: 250 ATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRLLDVAVVGQEHYTVATQVQETLQAYK 309 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 310 SLQDIIAILG 319 >gi|3913123|sp|O50341|ATPB_FERIS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|2687832|emb|CAA75783.1| F1F0-ATPase beta subunit [Fervidobacterium islandicum] Length = 472 Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 165/300 (55%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N +G+PID L D+ + + P+M Q+ E + +TG++VID+ P Sbjct: 90 LGRMFNVIGEPIDEQGELK--DIEYWPIHRPAPSMTEQKTEIEILETGLKVIDLLAPFPK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKK 216 G +IG F G+G+GK+ L+ R+ + I + VGER RE + ++E L Sbjct: 148 GGKIGFFGGAGVGKTVLVMEMIRNIAIEHHGFSIFAGVGERTREGNDLYLEMTEAGVLNN 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +E P R LTA+TIAEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TVLVFGQMNEPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 268 MPSAVGYQPTLSTDMGELQERI--TSTKKGSITSVQAIYVPADDITDPAPATTFTHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 IVL+R LA G YP VDPL S S++ D E ++ + ++ R+++ +DI I G Sbjct: 326 IVLSRQLAALGLYPAVDPLDSTSKILDPNIVGKEHYEVARGVQEVLQRYKDLQDIIAILG 385 >gi|282857664|ref|ZP_06266878.1| V-type sodium ATP synthase, B subunit [Pyramidobacter piscolens W5455] gi|282584514|gb|EFB89868.1| V-type sodium ATP synthase, B subunit [Pyramidobacter piscolens W5455] Length = 470 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 167/333 (50%), Gaps = 19/333 (5%) Query: 78 GEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAM 136 G ++ + F + S GRV N G PIDG + + ++ + ++ P Sbjct: 64 GLDVDTASVTFLGKSLELPVSEDMLGRVFNGRGDPIDGGAPIIAEKNIDVNGLAMNP--Y 121 Query: 137 NRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--------SDCFD 188 +R ++ +TGI ID P+ GQ++ +F+ SG+ + + + AR S+ F Sbjct: 122 SRDYPDEFIQTGISTIDGMNPMVRGQKLPIFSASGLPHNRMAAQLARQANVIGGGSEKF- 180 Query: 189 KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS- 246 V+ + +G E F+ED+ L ++V+ + +++ + R P A+T AEY + Sbjct: 181 AVVFAAMGITFEEAAFFMEDFRKTGALDRTVMYINLANDPAVERIYTPKLALTAAEYLAF 240 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 K +VL+IL +T + ++REI+ E+P RGYP ++++L + ER G + G+ Sbjct: 241 EKNMHVLVILTDLTNYCEALREISAARKEVPGRRGYPGYLYTDLATMYERAGRVKGSTGS 300 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-- 364 IT V + + D+ PI D I +G I+L+R+L G YPPVD + S+SRL DK Sbjct: 301 ITQVPILTMPEDDKTHPIPDLTGYITEGQIILSRNLHRTGIYPPVDVMPSLSRLKDKGIG 360 Query: 365 ---WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 D L++ L R +E +++ +I G Sbjct: 361 EGKTREDHADLMNQLFAAYARGKEAKELAVILG 393 >gi|256810421|ref|YP_003127790.1| ATP synthase, B subunit [Methanocaldococcus fervens AG86] gi|256793621|gb|ACV24290.1| ATP synthase, B subunit [Methanocaldococcus fervens AG86] Length = 464 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/332 (30%), Positives = 165/332 (49%), Gaps = 16/332 (4%) Query: 59 LGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD 116 +GQV+ R L +V + G + + F +I S GR+ N G PIDG Sbjct: 45 MGQVLEAREGLAVVQVFEGTTGLNTNQTKVRFTGKTAKIGVSMEMLGRIFNGRGVPIDGG 104 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + ++I ++R+ +TGI ID L GQ++ +F+GSG+ + Sbjct: 105 PEIVP-EKELDINGYPLNPISRKVPSDFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNQ 163 Query: 177 LLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 L + AR V+ + +G E F+E++ L+++VV + +++ I Sbjct: 164 LAAQIARQAKVRGEGEKFAVVFAAMGITSEEANFFMEEFRKTGALERAVVFINLANDPAI 223 Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R + P A+T+AEY + + D +VL+IL +T + ++REI+ E+P RGYP +++ Sbjct: 224 ERILTPRIALTVAEYLAYEKDMHVLVILTDMTNYCEALREISAARNEVPGRRGYPGYMYT 283 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L L ER G + G IT + + + D+ PI D I +G IVL+R L +G Y Sbjct: 284 DLATLYERAGRVKGRVGTITQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIY 343 Query: 349 PPVDPLASVSRLADKAWS-----ADEKKLVSS 375 PPVD L S+SRLA D KK+++ Sbjct: 344 PPVDVLPSLSRLAGNGQGEGKTREDHKKVINQ 375 >gi|123969172|ref|YP_001010030.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. AS9601] gi|166201727|sp|A2BT12|ATPB_PROMS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|123199282|gb|ABM70923.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. AS9601] Length = 486 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + D + I P + + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVNTKD-TAPIHRAAPKLTDLETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L +S V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + + DE K ++ + R++E Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYKTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|82793401|ref|XP_728025.1| ATP synthase F1subunit beta [Plasmodium yoelii yoelii str. 17XNL] gi|23484166|gb|EAA19590.1| ATP synthase F1, beta subunit [Plasmodium yoelii yoelii] Length = 533 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 102/316 (32%), Positives = 161/316 (50%), Gaps = 31/316 (9%) Query: 103 GRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDIFTPLC 159 GR++N +G+PID GD K + + + PP Q E TGI+V+D+ P Sbjct: 140 GRIMNVIGEPIDECGDIKSKK----LLPIHRDPPLFTDQSTEPALLITGIKVVDLIAPYA 195 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK T+L M ++ K + + VGER RE + + L + Sbjct: 196 KGGKIGLFGGAGVGK-TVLIMELINNVAKKHGGYSVFAGVGERTREGNDLYHEMLTTGVI 254 Query: 215 --------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSI 259 K+ +V +E P R LT +T+AEYF + +VLL +D+I Sbjct: 255 KKKKIKDNEYDFSGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEENQDVLLFVDNI 314 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ ++L L ERI + + G+IT+V +V V D+ Sbjct: 315 YRFTQAGSEVSALLGRIPSAVGYQPTLATDLGALQERI--TTTKNGSITSVQAVYVPADD 372 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 DP + S LD VL+RS+AE G YP VDPL S SR L ++ ++ ++ Sbjct: 373 LTDPAPATTFSHLDATTVLSRSIAELGIYPAVDPLDSTSRMLTPDIVGIEQYEVARNIQQ 432 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 433 ILQDYKSLQDIIAILG 448 >gi|157414039|ref|YP_001484905.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT 9215] gi|254525571|ref|ZP_05137623.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT 9202] gi|166990371|sp|A8G6T8|ATPB_PROM2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157388614|gb|ABV51319.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT 9215] gi|221536995|gb|EEE39448.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT 9202] Length = 486 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + D + I P + + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVNTKD-TAPIHRAAPKLTDLETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L +S V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + + DE K ++ + R++E Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYKTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|126696966|ref|YP_001091852.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT 9301] gi|166201724|sp|A3PES6|ATPB_PROM0 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|126544009|gb|ABO18251.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT 9301] Length = 486 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + D + I P + + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVNTKD-TAPIHRAAPKLTDLETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L +S V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + + DE K ++ + R++E Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYKTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|33861994|ref|NP_893555.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|81835551|sp|Q7V049|ATPB_PROMP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|33640362|emb|CAE19897.1| H+-transporting ATP synthase beta subunit [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 486 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + D++ I P + + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVNTSDIA-PIHRSAPKLTDLETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L +S V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLSQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R LA +G YP VDPL S S + + DE K ++ + R++E Sbjct: 334 TFAHLDATTVLARGLAAKGIYPAVDPLDSTSTMLQPSVVGDEHYKTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|23503591|dbj|BAC20392.1| ATP synthase beta-subunit [Pediastrum duplex] Length = 376 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 160/313 (51%), Gaps = 30/313 (9%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM----NRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D + K + ++ I + PPA R + F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVDNMGPV-KNEETLPI-HRTPPAFVDLDTRLSI---FETGIKVVDLLAP 85 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 86 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGV 145 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 146 IVEKNLADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFV 203 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 204 QAGAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDP 261 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIH 381 + + LD VL+R LA +G YP V PL S S + + W EK S+ + Sbjct: 262 APATTFAHLDATTVLSRDLAAKGIYPAVSPLESTSTML-QPWILGEKHYDCAQSVKRTLQ 320 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 321 RYKELQDIIAILG 333 >gi|217076683|ref|YP_002334399.1| F0F1 ATP synthase subunit beta [Thermosipho africanus TCF52B] gi|226740685|sp|B7IG44|ATPB_THEAB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|217036536|gb|ACJ75058.1| ATP synthase F1, beta subunit [Thermosipho africanus TCF52B] Length = 470 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 103/300 (34%), Positives = 164/300 (54%), Gaps = 10/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N +G+PIDG + K D+ + K PP++ Q + +TGI+VID+ P Sbjct: 90 LGRMFNVIGEPIDGKEDEIK-DVEYWPIHKAPPSITEQSTSVEILETGIKVIDLLAPFPK 148 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKK 216 G +IG F G+G+GK+ L+ R+ + S+ VGER RE E D + L Sbjct: 149 GGKIGFFGGAGVGKTVLVMELIRNIAIEHHGFSMFAGVGERTREGNELYLDMQEAEVLDN 208 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +E P R LTA+T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 209 TVLVFGQMNEPPGARFRVALTALTMAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGR 268 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 269 MPSAVGYQPTLATDMGELQERI--TSTKKGSITSVQAIYVPADDITDPAPATTFTHLDAT 326 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R A G YP VDPL S S++ D E ++ + ++ R+++ +DI I G Sbjct: 327 VVLSRRRAALGLYPAVDPLDSTSKMLDPNIIGQEHYEVARGVQEILQRYKDLQDIIAILG 386 >gi|156972756|ref|YP_001443663.1| F0F1 ATP synthase subunit beta [Vibrio harveyi ATCC BAA-1116] gi|190358215|sp|A7N0Y1|ATPB1_VIBHB RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|156524350|gb|ABU69436.1| hypothetical protein VIBHAR_00421 [Vibrio harveyi ATCC BAA-1116] Length = 467 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 153/305 (50%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 GR++N LG ID +G ++ + + P+ Q E +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGEIGAEEVYS--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVE 203 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 204 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + + Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389 LD +VLNR++A G YP +DPL S SR D D + + R++E +DI Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQDHYDTARGVQQTLQRYKELKDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|4519276|dbj|BAA75553.1| ATP synthase beta-subunit [Volvox dissipatrix] Length = 376 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVIVEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|149173275|ref|ZP_01851906.1| F0F1 ATP synthase subunit beta [Planctomyces maris DSM 8797] gi|148848081|gb|EDL62413.1| F0F1 ATP synthase subunit beta [Planctomyces maris DSM 8797] Length = 483 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 112/333 (33%), Positives = 175/333 (52%), Gaps = 23/333 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LG P+DG + D I K P N + F+TGI+V+D+ TP G Sbjct: 99 GRVFNLLGDPVDGRGEVST-DERWPIHRKPPLLENLSAKTELFETGIKVVDLLTPFVRGG 157 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLGDN-- 213 + G+F G+G+GK+ +L+ + AR S + + VGER RE E E +G Sbjct: 158 KAGLFGGAGLGKTVILTELIARIASAHGGYSVFAGVGERTREGNDLWLEMQETKIGQTDR 217 Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 ++++ +V +E P R L+A+T+AE+F + G + LL +D+I RF+ + E++ Sbjct: 218 SVIEQTCMVFGQMNEPPGARLRVALSALTMAEWFRDTTGTDTLLFVDNIFRFSQAGSEVS 277 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +EL L ERI + + G IT+V +V V D+ DP + S Sbjct: 278 ALLGRMPSAVGYQPTLGTELGELQERI--TSTKNGAITSVQAVYVPADDPTDPAPATAFS 335 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD I L R ++E+G YP +DPLAS SR+ D + + ++ + + R+ E +DI Sbjct: 336 HLDAFIYLERKISEKGIYPAIDPLASSSRILDPQYVGERHYRVAREVQQTLQRYRELQDI 395 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I GVD + ++ VH+ I FL Q Sbjct: 396 IAI----LGVDELSEEDKLIVHRARRIERFLSQ 424 >gi|187479684|ref|YP_787709.1| F0F1 ATP synthase subunit beta [Bordetella avium 197N] gi|118573510|sp|Q2KU36|ATPB_BORA1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|115424271|emb|CAJ50824.1| ATP synthase beta chain [Bordetella avium 197N] Length = 466 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I P + +TGI+VID+ P G Sbjct: 91 GRIMDVLGRPIDEAGPI-NADEKRAIHQHAPKFDELSPSVELLETGIKVIDLVCPFAKGG 149 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 269 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E ++ + + R++E RDI I G Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYQVARGVQQTLQRYKELRDIIAILG 384 >gi|329114830|ref|ZP_08243587.1| ATP synthase subunit beta [Acetobacter pomorum DM001] gi|326695961|gb|EGE47645.1| ATP synthase subunit beta [Acetobacter pomorum DM001] Length = 490 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 156/308 (50%), Gaps = 19/308 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + + I + P ++ + TGI+V+D+ P G Sbjct: 101 GRILNVIGEPIDEKGPIPTSRRA-PIHRQAPSFEDQAAASEILMTGIKVVDLLCPYLKGG 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-------LGD 212 +IG+F G+G+GK+ ++ + +S+ VGER RE + + LG+ Sbjct: 160 KIGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYYEMQDAGVIKLGE 219 Query: 213 NLK----KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 N K +V +E P R LT +T+AEYF + +VL +D+I RF + Sbjct: 220 NGSTEGSKVALVFGQMNEPPGARARVALTGLTLAEYFRDEENQDVLFFVDNIFRFTQAGS 279 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + Sbjct: 280 EVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPAA 337 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD VLNRS+AE G YP VDPL S SR D E V+ + ++ ++ Sbjct: 338 TFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRALDPQIVGQEHYDVACEVQRILQTYKSL 397 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 398 QDIIAILG 405 >gi|183206666|gb|ACC54531.1| ATP synthase beta subunit [Campanula elatines] Length = 488 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 209 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIITILG 399 >gi|318610455|dbj|BAJ61697.1| ATP synthase beta-subunit [Volvulina compacta] Length = 403 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 40 LGRIFNVLGEPVDNMGNVLVEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 98 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 99 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 158 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 159 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDSAQSVKKTLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|260774962|ref|ZP_05883862.1| ATP synthase beta chain [Vibrio coralliilyticus ATCC BAA-450] gi|260609052|gb|EEX35211.1| ATP synthase beta chain [Vibrio coralliilyticus ATCC BAA-450] Length = 467 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 157/304 (51%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G + + I + P + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDECGEIG-AEETYSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLKK 216 +IG+F G+G+GK+ + + +S+ VGER RE +F +++ N++K Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEK 204 Query: 217 S-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E + ++ + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARNVQQTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|300726965|ref|ZP_07060388.1| ATP synthase F1, beta subunit [Prevotella bryantii B14] gi|299775750|gb|EFI72337.1| ATP synthase F1, beta subunit [Prevotella bryantii B14] Length = 508 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 98/330 (29%), Positives = 160/330 (48%), Gaps = 41/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PIDG +L + S I + P + ++ TGI+VID+ P G Sbjct: 95 GRMLNVIGQPIDGMSNLNM-EGSYPIHREAPKFEDLSTHKEMLATGIKVIDLLEPYMKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212 +IG+F G+G+GK+ L+ + + + VGER RE + I D + G+ Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMIESGVIKYGE 213 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG-- 249 +K++ +V +E P R L+ +T+AE F G Sbjct: 214 KFRKAMDEGKWDLSLVDPEELKKSQATLVYGQMNEPPGARSAVALSGLTVAEEFRDHGGA 273 Query: 250 ----DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +++ +D+I RF + E++ G +P A GY ++ SE+ ++ ERI + + G Sbjct: 274 NGEASDIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGQMQERI--TSTKNG 331 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPLAS SR+ D Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKIAELGIYPAVDPLASTSRILDPLI 391 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + + L+ + E +DI I G Sbjct: 392 VGKEHYECAQRVKELLQHYNELQDIIAILG 421 >gi|119479209|ref|XP_001259633.1| ATP synthase F1, beta subunit, putative [Neosartorya fischeri NRRL 181] gi|119407787|gb|EAW17736.1| ATP synthase F1, beta subunit, putative [Neosartorya fischeri NRRL 181] Length = 519 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 158/313 (50%), Gaps = 16/313 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 +I GR++N G PID + K I ++ P + + + TGI+V+D Sbjct: 122 KIPVGPATLGRIVNVTGDPIDERGPI-KATKFAPIHAEAPEFIEQSTSAEILVTGIKVVD 180 Query: 154 IFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY 209 + P G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 181 LLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEM 239 Query: 210 LGDNL------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 + K +V +E P R LT +TIAEYF +G +VLL +D+I RF Sbjct: 240 QETGVIQLEGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRF 299 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ D Sbjct: 300 TQAGSEVSALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTD 357 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIH 381 P + + LD VL+R ++E G YP VDPL S SR+ D +E V++ + ++ Sbjct: 358 PAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYAVATRVQQMLQ 417 Query: 382 RFEETRDIRLIGG 394 ++ +DI I G Sbjct: 418 EYKSLQDIIAILG 430 >gi|584810|sp|Q08807|ATPB_GALSU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|396525|emb|CAA47241.1| H(+)-transporting ATP synthase [Cyanidium caldarium] Length = 476 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 C GR+ N LG+P+D ++ D + I P + F+TGI+VID+ P Sbjct: 88 CTLGRIFNVLGEPVDELGAIST-DRKLPIHRASPLFTQLETKPSIFETGIKVIDLLAPYK 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVSVFGGVGERTREGNDLYVEMKESKVIN 206 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 NL++S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 207 EKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDNNKQDVLLFIDNIFRFVQAGS 266 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 267 EVSALLGRMPSAVGYQPTLATEMGALQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 324 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + DE + + + + R++E Sbjct: 325 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPQIVGDEHYVTAQRVKENLQRYKEL 384 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 385 QDIIAILG 392 >gi|170293981|gb|ACB13084.1| ATP synthase beta subunit [Raphidonema nivale] Length = 366 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 104/312 (33%), Positives = 161/312 (51%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P ++ F+TGI+V+D+ P Sbjct: 19 ATLGRIFNVLGEPVD---NLGPVDAKEGLPIHRSAPLFVDLDTKLSIFETGIKVVDLLAP 75 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211 G +IG+F G+G+GK+ L+ + ARS V VGER RE + + Sbjct: 76 YRRGGKIGLFGGAGVGKTVLIMELINNIARSHGGVSVFAG-VGERTREGNDLYMEMKESK 134 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 135 VINEDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 194 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 195 AGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPA 252 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + R Sbjct: 253 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKETLQR 311 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 312 YKELQDIIAILG 323 >gi|116787106|gb|ABK24378.1| unknown [Picea sitchensis] Length = 568 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 164/314 (52%), Gaps = 27/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR++N +G+ ID KGDL+ + I + P + + ++ TGI+V+D+ Sbjct: 174 ATLGRIMNVIGEAIDH-----KGDLTTDHYLPIHREAPSFVEQSTEQEILVTGIKVVDLL 228 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 229 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIE 287 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LG+ +S +V +E P R LT +T+AE+F ++G +VLL +D+I R Sbjct: 288 SGVIKLGEKQGESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFR 347 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 348 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLT 405 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 406 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVL 465 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 466 QNYKNLQDIIAILG 479 >gi|18073050|emb|CAC88857.1| atpD beta synthase chain [Azorhizophilus paspali] Length = 349 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 89/264 (33%), Positives = 140/264 (53%), Gaps = 7/264 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG PID +G+ + I P + + +TGI+VID+ P G Sbjct: 66 GRIMDVLGNPIDEAGPIGE-EERWTIHRAAPSYAEQAGGNELLETGIKVIDLVCPFAKGG 124 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKSV 218 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 125 KVGLFGGAGVGKTVNMMELIRNIAMEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVA 184 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ G +P Sbjct: 185 LVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPS 244 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +VL Sbjct: 245 AVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVL 302 Query: 339 NRSLAEEGRYPPVDPLASVSRLAD 362 +R +A G YP VDPL S SR D Sbjct: 303 SRDIASLGIYPAVDPLDSTSRQLD 326 >gi|146271655|emb|CAL25309.1| atpD beta synthase chain [Pseudomonas moorei] Length = 284 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 83/250 (33%), Positives = 137/250 (54%), Gaps = 7/250 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 36 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 95 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 96 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 155 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ Sbjct: 156 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDL 213 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD +VL+R +A G YP VDPL S SR D D + + ++ Sbjct: 214 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGNDHYETARGVQYV 273 Query: 380 IHRFEETRDI 389 + R++E +DI Sbjct: 274 LQRYKELKDI 283 >gi|145596142|ref|YP_001160439.1| F0F1 ATP synthase subunit beta [Salinispora tropica CNB-440] gi|189081343|sp|A4XAW2|ATPB_SALTO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|145305479|gb|ABP56061.1| ATP synthase F1, beta subunit [Salinispora tropica CNB-440] Length = 486 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 160/300 (53%), Gaps = 11/300 (3%) Query: 103 GRVINALGK--PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G V NA+G+ ++ ++L D +I K P + + + +TGI+VID+ P Sbjct: 105 GHVFNAIGECLNLEPGETLSPDD-HWQIHRKAPAFADLEPKTEMLETGIKVIDLLAPYVK 163 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLGDN-LKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + + K Sbjct: 164 GGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLIAEMTESGVIDK 223 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L+A+T+AEYF + VLL +D+I RF + E++T G Sbjct: 224 TALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNIFRFTQAGSEVSTLLGR 283 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + IT++ ++ V D++ DP + + LD Sbjct: 284 MPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADDYTDPAPATTFAHLDAT 341 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L RS++++G YP VDPLAS SR+ + E V++ + ++ R+++ +DI I G Sbjct: 342 TNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFTVATEVKRILQRYKDLQDIIAILG 401 >gi|19033087|gb|AAL83528.1|AF408800_1 ATP synthase beta subunit [Mougeotia sp. UTEX LB 758] Length = 402 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 98/313 (31%), Positives = 160/313 (51%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG ++ I P F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---NLGPVNNKTTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-------- 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYIEMKESKV 154 Query: 207 --EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 E+ +G++ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 155 INEENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFV 212 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 213 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 270 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W + ++ ++ + Sbjct: 271 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGTEHYEIAQAVKETLQ 329 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 330 RYKELQDIIAILG 342 >gi|183206676|gb|ACC54536.1| ATP synthase beta subunit [Campanula rotundifolia] Length = 477 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 198 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 376 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 377 YKELQDIITILG 388 >gi|89070092|ref|ZP_01157422.1| ATP synthase subunit B [Oceanicola granulosus HTCC2516] gi|89044313|gb|EAR50456.1| ATP synthase subunit B [Oceanicola granulosus HTCC2516] Length = 474 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + D I + P + + TGI+V+D+ P Sbjct: 84 ATLGRILNVVGEPVDEKGPI-SADERRPIHAPAPDFAQQSTEAEILVTGIKVVDLLAPYS 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + Sbjct: 143 KGGKIGLFGGAGVGKTVLIQELINN--IAKVHSGFSVFAGVGERTREGNDLYYEMIEGGV 200 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 DNL++S V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 201 INPDNLEESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + G+IT+V ++ V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTRSGSITSVQAIYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD LNR+++E G YP VDPL S SRL D +E ++ + ++ R++ Sbjct: 319 ATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRLMDPQIVGEEHYQVARDVQGILQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|297692195|ref|XP_002823453.1| PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit beta, mitochondrial-like [Pongo abelii] Length = 578 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 163/311 (52%), Gaps = 22/311 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR---QRVEKGF-KTGIRVIDIFTP 157 GR++N +G+PID + K + +++ + +R VE+ F TGI+V+D+ P Sbjct: 185 LGRIMNVIGEPIDERGPI-KTKQXVALIASMHKGTSRFMEMSVEQEFLVTGIKVVDLLAP 243 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIE------ 207 G +IG+F G+G+GK+ L+ + A++ V VGER RE + + Sbjct: 244 YAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLLPXNDXIL 302 Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF Sbjct: 303 VLSTXKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQ 362 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ ++ERI + +KG+IT+V ++ V D+ DP Sbjct: 363 AGSEVSALLGRIPSAVGYQPTLATDMGTMMERI--TTTKKGSITSVQAIYVPADDLTDPA 420 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383 + + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ + Sbjct: 421 PATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDY 480 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 481 KSLQDIIAILG 491 >gi|269962672|ref|ZP_06177017.1| ATP synthase subunit B [Vibrio harveyi 1DA3] gi|269832595|gb|EEZ86709.1| ATP synthase subunit B [Vibrio harveyi 1DA3] Length = 467 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 153/305 (50%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 GR++N LG ID +G ++ + + P+ Q E +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGEIGAEEVYS--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVE 203 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 204 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + + Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDI 389 LD +VLNR++A G YP +DPL S SR D D + + R++E +DI Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQDHYDTARGVQQTLQRYKELKDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|119350503|gb|ABL63202.1| AtpB [Golenkinia brevispicula] Length = 389 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 159/310 (51%), Gaps = 26/310 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D ++G D S+ I P ++ F+TGI+V+D+ P Sbjct: 39 GRIFNVLGEPVD---NMGPVDANESLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRR 95 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IE 207 G +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 96 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVE 155 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 L D+ K +V +E P R LTA+T+AE+F +VL +D+I RF + Sbjct: 156 KNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEFFRDINKQDVLFSMDNIFRFVQAG 213 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 214 AEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 271 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W EK S+ + R++ Sbjct: 272 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEKHYDCAQSVKKTLQRYK 330 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 331 ELQDIIAILG 340 >gi|146304666|ref|YP_001191982.1| V-type ATP synthase subunit B [Metallosphaera sedula DSM 5348] gi|172046940|sp|A4YI06|VATB_METS5 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|145702916|gb|ABP96058.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region [Metallosphaera sedula DSM 5348] Length = 466 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 102/331 (30%), Positives = 170/331 (51%), Gaps = 25/331 (7%) Query: 83 LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKG---DLSMEIMSKVPPAMNR 138 +G V GR + S GR+ N LG P+D + KG D++ E ++ PA+ R Sbjct: 71 VGTTVRFLGRGLEVKISEEMLGRIFNPLGDPLDNGPMVIKGEKRDINGEPLN---PAI-R 126 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVII 192 E+ +TGI ID L GQ++ +F+GSG+ + L + A+ V+ Sbjct: 127 DYPEEFIQTGISAIDGLNSLLRGQKLPIFSGSGLPANILAAQIAKQATVRGEESNFAVVF 186 Query: 193 SLVGERGREV---REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 +G R E R+F E+ N + ++++ ++E P+++ + P TA+T+AEY + + Sbjct: 187 GAIGVRYDEALFFRKFFEETGAIN--RVALIMSLANEPPVMKTLTPKTALTLAEYLAFEQ 244 Query: 250 D-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 D +VL IL +T + ++REI+ + E+P GYP ++++L + ER G +KG+IT Sbjct: 245 DMHVLAILIDMTNYCEALREISASKEEVPGRGGYPGYMYTDLAQTYERAGKVIGKKGSIT 304 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA- 367 + + + D+ PI D I +G I L+RSL +G YPP++ L S+SRLA Sbjct: 305 QMPILTMPNDDITHPIPDLTGYITEGQITLDRSLYNKGIYPPINVLMSLSRLAKDGIGEG 364 Query: 368 ----DEKKLVSSLTHLIHRFEETRDIRLIGG 394 D K L + L + +TR + I G Sbjct: 365 KTRDDHKDLSNQLFAAYAKAVDTRGLAAIIG 395 >gi|38233646|ref|NP_939413.1| F0F1 ATP synthase subunit beta [Corynebacterium diphtheriae NCTC 13129] gi|81564886|sp|Q6NHS9|ATPB_CORDI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|38199906|emb|CAE49572.1| ATP synthase beta chain [Corynebacterium diphtheriae] Length = 481 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/298 (33%), Positives = 161/298 (54%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + LG+ I PP + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGG 161 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTA 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 222 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI S K K +IT++ +V V D++ DP + + LD Sbjct: 282 SAVGYQPTLADEMGVLQERI-TSIKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATTE 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L+R++A +G YP V+PL S SR+ + + V+ + +++ + +E +DI I G Sbjct: 340 LDRAIASKGIYPAVNPLTSTSRILEPGIVGERHYAVAQRVINILQKNKELQDIIAILG 397 >gi|217976537|ref|YP_002360684.1| F0F1 ATP synthase subunit beta [Methylocella silvestris BL2] gi|217501913|gb|ACK49322.1| ATP synthase F1, beta subunit [Methylocella silvestris BL2] Length = 483 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 24/311 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N +G+ +D + D + ++ P Q E TGI+V+D+ P G Sbjct: 92 GRIMNVIGESVDEAGPILASDF--RAIHQLAPTYAEQATEAQILVTGIKVVDLLAPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDN 213 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + N Sbjct: 150 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYYEMIESKVNLN 208 Query: 214 LK---------KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAH 264 + K +V E P R LT +TIAE F KG +VL +D+I RF Sbjct: 209 PRENNGSAAGSKCALVYGQMSEPPGARARVALTGLTIAEDFRDKGQDVLFFVDNIFRFTQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 269 AGSEMSALLGRIPSAVGYQPTLATDMGALQERI--TTTTKGSITSVQAIYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRF 383 + + LD VL+RS+AE+G YP VDPL S SR+ +E V+ + + R+ Sbjct: 327 PATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLSPLIVGEEHYAVARQVQQTLQRY 386 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 387 KGLQDIIAILG 397 >gi|4519344|dbj|BAA75587.1| ATP synthase beta-subunit [Chlamydomonas debaryana] Length = 376 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 160/307 (52%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNV-LVEATLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 150 NLSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAEV 209 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 210 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 267 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT--HLIHRFEETR 387 + LD VL+R+LA +G YP VDPL S S + + W EK S+ T + R++E + Sbjct: 268 AHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYESAQTVKKTLQRYKELQ 326 Query: 388 DIRLIGG 394 DI I G Sbjct: 327 DIIAILG 333 >gi|183206692|gb|ACC54544.1| ATP synthase beta subunit [Campanula arvatica] Length = 487 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 93 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 149 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 208 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 209 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 268 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 269 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 326 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 327 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 386 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 387 YKELQDIITILG 398 >gi|183206648|gb|ACC54522.1| ATP synthase beta subunit [Campanula fragilis] Length = 461 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 193 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 194 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 253 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 254 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 311 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 312 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 371 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 372 YKELQDIITILG 383 >gi|1703718|sp|P50003|ATPB_PRODI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|150558|gb|AAA25556.1| ATP synthase beta subunit [Prochloron didemni] Length = 483 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + S I P + F+TGI+VID+ TP Sbjct: 95 ATLGRIFNILGEPVDNQGPVYTAETS-PIHRAAPKFTDLDTKPTVFETGIKVIDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVG---ERGRE----VREFIEDYL-- 210 G +IG+F G+G+GK+ ++ + + +S+ G ER RE E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIAINHGGVSVFGGVGERTREGNDLYNEMIESKVIN 213 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DNL +S +V +E P R L+A+T+AEYF +VLL +D+I RF + Sbjct: 214 ADNLNESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + D ++ + R++E Sbjct: 332 TFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQAGIVGEDHYNTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|154505250|ref|ZP_02041988.1| hypothetical protein RUMGNA_02764 [Ruminococcus gnavus ATCC 29149] gi|153794448|gb|EDN76868.1| hypothetical protein RUMGNA_02764 [Ruminococcus gnavus ATCC 29149] Length = 456 Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 16/311 (5%) Query: 98 SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + LG+PID G L + + + + P A R E+ +TG+ ID Sbjct: 82 SEDMLGRVFDGLGRPIDNGPQILPQARMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ +F+ SG+ + L + AR +D V+ + +G E F+E + Sbjct: 140 TLVRGQKLPIFSASGLPHAKLAAQIARQAKVLGTDEKFAVVFAAMGITFEESNFFVESFK 199 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268 + ++V+ V +++ I R P A+T AEY + + D +VL+IL IT +A ++RE Sbjct: 200 ETGAIDRTVLFVNLANDPAIERIATPKMALTAAEYLAFEKDMHVLVILTDITNYADALRE 259 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ E+P RGYP ++++L + ER G +KG+IT + + + D+ PI D Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLATMYERAGRQNGKKGSITMIPILTMPEDDKTHPIPDLT 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383 I +G I+L+R L +G PP+D L S+SRL DK AD ++ L R Sbjct: 320 GYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFAAYARG 379 Query: 384 EETRDIRLIGG 394 ++ +++ +I G Sbjct: 380 KDAKELMVILG 390 >gi|183206612|gb|ACC54504.1| ATP synthase beta subunit [Theilera guthriei] Length = 480 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 104/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 201 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 202 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 261 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 319 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + S + + S+ + R Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSKEHYETAQSVKQTLQR 379 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 380 YKELQDIITILG 391 >gi|154249022|ref|YP_001409847.1| F0F1 ATP synthase subunit beta [Fervidobacterium nodosum Rt17-B1] gi|171769321|sp|A7HJV7|ATPB_FERNB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|154152958|gb|ABS60190.1| ATP synthase F1, beta subunit [Fervidobacterium nodosum Rt17-B1] Length = 472 Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 102/300 (34%), Positives = 167/300 (55%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+IN +G+PID + L D+ + + P+M Q+ E + +TG++VID+ P Sbjct: 90 LGRMINVIGEPIDENGELK--DVEYWPIHRPAPSMAEQKTEIEILETGLKVIDLLAPFPK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKK 216 G +IG F G+G+GK+ L+ R+ + S+ VGER RE + ++E L Sbjct: 148 GGKIGFFGGAGVGKTVLVMEMIRNIAIEHKGFSMFAGVGERTREGNDLYLEMQEAGVLNN 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +E P R LTA+T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TVLVFGQMNEPPGARFRVALTALTVAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +++ L ERI + ++G+IT+V ++ V D+ DP + + LD Sbjct: 268 MPSAVGYQPTLATDMGELQERI--TSTKRGSITSVQAIYVPADDITDPAPATTFTHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 IVL+R LA G YP VDPL S S++ D E ++ + ++ R+++ +DI I G Sbjct: 326 IVLSRQLAALGLYPAVDPLDSTSKILDPNIVGKEHYEVARGVQEVLQRYKDLQDIIAILG 385 >gi|299143386|ref|ZP_07036466.1| V-type sodium ATPase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517871|gb|EFI41610.1| V-type sodium ATPase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 464 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 102/355 (28%), Positives = 172/355 (48%), Gaps = 18/355 (5%) Query: 57 DNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID 114 D +GQV++I+ D I+ + +G ++F F I S GRV + +G+PID Sbjct: 40 DLVGQVVKIDGDSAIIQVFGENLGVSTKNSKVIFEAHPFEIPLSNEILGRVFDGIGRPID 99 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + D + + + RQ +TGI ID L GQ++ +F+GSG+ Sbjct: 100 KGGDI-YSDEFYNVNGRPINPVARQYPRNFIQTGISSIDGLMTLIRGQKLPIFSGSGLPH 158 Query: 175 STLLSMFAR--------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDE 226 + L + R SD ++ + +G + E F E + + + VV+ + Sbjct: 159 NELAAQIVRQAKISSKSSDENFAIVFAAIGVKHDEADYFREAFKNAGVSEKVVMYINYAD 218 Query: 227 SPILRKM-APLTAVTIAEYFSSKGDN-VLLILDSITRFAHSIREIATNSGELPVARGYPT 284 PI+ ++ P A+T AEY + K N VL+I+ +T + ++RE++++ E+P +GYP Sbjct: 219 DPIMERLIVPKCALTAAEYLAYKEHNHVLVIMTDVTSYGEALREVSSSREEVPSRKGYPG 278 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 ++S+L L ER G + G++T + + + D+ PI D I +G IVL+R L + Sbjct: 279 HLYSDLAMLYERAGMIKDIDGSVTLIPILTMPNDDITHPIPDLSGFITEGQIVLSRDLNQ 338 Query: 345 EGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 G YPPV+ L S+SRL + D L S L + +E R + I G Sbjct: 339 SGVYPPVNVLPSLSRLMKDGIGEGYTREDHADLSSQLFASYSKVQEVRALAQIIG 393 >gi|119503555|ref|ZP_01625638.1| F0F1 ATP synthase subunit beta [marine gamma proteobacterium HTCC2080] gi|119460617|gb|EAW41709.1| F0F1 ATP synthase subunit beta [marine gamma proteobacterium HTCC2080] Length = 465 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 107/340 (31%), Positives = 173/340 (50%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSME 127 +V +G E IS G V + G P GR+++ LG PID +G+ S Sbjct: 49 VVRAIAMGSSEGISRGLSVENTGAPISVPVGIETLGRIMDVLGNPIDEKGPIGEQQRSA- 107 Query: 128 IMSKVPPAMNRQRV-EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + + PA + E+ +TGI+VID+ P G ++G+F G+G+GK+ + + Sbjct: 108 -IHRAAPAYDELAASEEVLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIA 166 Query: 187 FDKVIISL---VGERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAP 235 + +S+ VGER RE +F + +N+ +S V V +E P R Sbjct: 167 TEHSGLSVFAGVGERTREGNDFYYEMQESGVVNIENMDQSKVAMVYGQMNEPPGNRLRVA 226 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 LT +T+AE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L E Sbjct: 227 LTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQE 286 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + + G+IT++ +V V D+ DP + + LD +VL+R +A +G YP VDPL Sbjct: 287 RI--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAVDPLD 344 Query: 356 SVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 S SR D E V+ + ++ R++E +DI I G Sbjct: 345 STSRQLDPLVIGTEHYDVARGVQSVLQRYKELKDIIAILG 384 >gi|90994450|ref|YP_536940.1| ATP synthase CF1 beta subunit [Porphyra yezoensis] gi|118573718|sp|Q1XDM8|ATPB_PORYE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|90819014|dbj|BAE92383.1| ATP synthase CF1 beta chain [Porphyra yezoensis] Length = 475 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 158/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + P PA + + F+TGI+V+D+ P Sbjct: 90 LGRIFNVLGEPVD---NLGPVDSESTLPIHRPAPAFTKLETKPNIFETGIKVVDLLAPYR 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVID 206 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DNLK+S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 207 ADNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 266 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP+ + Sbjct: 267 EVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTEGSITSIQAVYVPADDLTDPVPAT 324 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + E + + R++E Sbjct: 325 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVGTEHYSTAQEVKSTLQRYKEL 384 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 385 QDIIAILG 392 >gi|210075206|ref|XP_500475.2| YALI0B03982p [Yarrowia lipolytica] gi|199425131|emb|CAG82701.2| YALI0B03982p [Yarrowia lipolytica] Length = 509 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 102/305 (33%), Positives = 160/305 (52%), Gaps = 18/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+IN G+PID + + + I + P + + +TGI+V+D+ P G Sbjct: 124 GRIINVCGEPIDERGPI-EATKFLPIHADPPTFAEQSTTAEVLETGIKVVDLLAPYARGG 182 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214 +IG+F G+G+GK+ L++ A++ V VGER RE RE E + NL Sbjct: 183 KIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFCG-VGERTREGNDLYREMKETGV-INL 240 Query: 215 K---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 + K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 241 EGESKVTLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVS 300 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ L ERI + +KG++T+V +V V D+ DP + + Sbjct: 301 ALLGRIPSAVGYQPTLATDMGALQERI--TTTQKGSVTSVQAVYVPADDLTDPAPATTFA 358 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SRL D E + S++ + ++ +DI Sbjct: 359 HLDATTVLSRGISELGIYPAVDPLDSKSRLLDIDVVGQEHYDVASNVQQTLQAYKSLQDI 418 Query: 390 RLIGG 394 I G Sbjct: 419 IAILG 423 >gi|169628544|ref|YP_001702193.1| F0F1 ATP synthase subunit beta [Mycobacterium abscessus ATCC 19977] gi|169240511|emb|CAM61539.1| ATP synthase beta subunit AtpD [Mycobacterium abscessus] Length = 476 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 163/301 (54%), Gaps = 15/301 (4%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLC 159 G V NALG +D G G D + + PPA ++ R E +TG++V+D+ TP Sbjct: 97 GHVFNALGNCLD---EPGYGSDFEKWSIHRKPPAFDQLEPRTEM-LETGLKVVDLLTPYV 152 Query: 160 HGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215 G +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK Sbjct: 153 RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELADANVLK 212 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 + +V DE P R L+A+T+AEYF +G +VLL +D+I RF + E++T G Sbjct: 213 DTALVFGQMDEPPGTRMRVALSALTMAEYFRDEQGQDVLLFIDNIFRFTQAGSEVSTLLG 272 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 273 RMPSAVGYQPTLADEMGELQERI--TSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDA 330 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 L+R++ +G +P VDPLAS S + + +E ++ + ++ R+++ +DI I Sbjct: 331 TTELSRAVFSKGIFPAVDPLASSSTILLPSVVGEEHYRVAQEVIRILQRYQDLQDIIAIL 390 Query: 394 G 394 G Sbjct: 391 G 391 >gi|110669124|ref|YP_658935.1| V-type ATP synthase subunit B [Haloquadratum walsbyi DSM 16790] gi|121684653|sp|Q18FB8|VATB_HALWD RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|109626871|emb|CAJ53340.1| H(+)-transporting two-sector ATPase, subunit B (A-type ATP synthase) [Haloquadratum walsbyi DSM 16790] Length = 475 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 146/292 (50%), Gaps = 18/292 (6%) Query: 88 FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147 F ++ + GRV++ G+PIDG + D EI+ R+ E+ +T Sbjct: 70 FSGETLKMKVTEDLLGRVLDGSGQPIDGGPEI-LADERREIVGAAINPYAREYPEEFIQT 128 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---------------VII 192 G+ +D L GQ++ +F+GSG+ + L AR + VI Sbjct: 129 GVAAVDGMNTLVRGQKLPIFSGSGLPHNELALQIARQATVPEEENADDNEDDGSEFAVIF 188 Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250 +G E EF+ED+ L++SVV + +D+ + R + P +T AEY + + D Sbjct: 189 GAMGITAEEANEFMEDFERTGALERSVVFMNLADDPAVERTVTPRMVLTTAEYLAFEKDY 248 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VL+IL +T + ++REI E+P RGYP ++++L L ER G E +G++T + Sbjct: 249 HVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLATLYERAGRIEGREGSVTQI 308 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + + GD+ PI D I +G I ++R L +G PPV+ L S+SRL D Sbjct: 309 PILTMPGDDDTHPIPDLTGYITEGQIYVDRDLNSQGVQPPVNVLPSLSRLMD 360 >gi|308177047|ref|YP_003916453.1| H(+)-transporting two-sector ATPase subunit beta [Arthrobacter arilaitensis Re117] gi|307744510|emb|CBT75482.1| H(+)-transporting two-sector ATPase, beta chain [Arthrobacter arilaitensis Re117] Length = 481 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 156/298 (52%), Gaps = 8/298 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG +D D+S + I + P + + +TGI+ ID+ TP G Sbjct: 101 GHIFNVLGDALDVDNSEIQVTERWPIHRQPPKFSELEGSTEMLETGIKSIDLLTPYIKGG 160 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E + LK + Sbjct: 161 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMDEANVLKDTA 220 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 221 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 280 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 281 SAVGYQPNLADEMGLLQERITSTKGR--SITSMQAVYVPADDYTDPAPAATFAHLDATTE 338 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP +DPL S SR+ D + D + + ++ + +E +DI I G Sbjct: 339 LSREIASRGLYPAIDPLTSTSRILDPQYIGQDHYDVAIRVKAILQKNKELQDIIAILG 396 >gi|289422486|ref|ZP_06424329.1| V-type ATP synthase beta chain 1 [Peptostreptococcus anaerobius 653-L] gi|289157058|gb|EFD05680.1| V-type ATP synthase beta chain 1 [Peptostreptococcus anaerobius 653-L] Length = 461 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 99/316 (31%), Positives = 160/316 (50%), Gaps = 13/316 (4%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+V+ +N D + I+L D + F +S S GRV + +GKP DG Sbjct: 42 GRVLEVNGDKAMVQLFEGSSGINLKDSKVRFLAKPLTLSVSEDMIGRVFDGMGKPKDGGP 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L D ++I + R + +TG+ ID L GQ++ +F+GSG+ + L Sbjct: 102 DLIPED-KLDINGIAINPVARDYPSEFIQTGVSAIDGLNTLVRGQKLPIFSGSGLPHANL 160 Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + AR D F V+ +G E + FI+D+ + +SV+ + +++ I Sbjct: 161 AAQIARQAKVLGTDDKF-AVVFGAIGITFEEAQYFIDDFKKTGAIDRSVLFMNLANDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + KG +VL+IL +T + ++REI+ E+P RGYP +++ Sbjct: 220 ERISTPRMALTCAEYLAFEKGMHVLVILTDLTNYCEALREISAARREVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L L ER G + G+IT V + + D+ PI D I +G I+L+R+L ++ Sbjct: 280 DLSTLYERAGKIKGRPGSITQVPILTMPEDDKTHPIPDLTGYITEGQIILSRALYKKNMM 339 Query: 349 PPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 340 PPIDVLPSLSRLKDKG 355 >gi|307343688|emb|CBJ19261.1| atpD synthase beta subunit [Micromonospora sp. GUI19] Length = 298 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 142/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|170782289|ref|YP_001710622.1| F0F1 ATP synthase subunit beta [Clavibacter michiganensis subsp. sepedonicus] gi|190358299|sp|B0RED4|ATPB_CLAMS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|169156858|emb|CAQ02026.1| ATP synthase beta chain [Clavibacter michiganensis subsp. sepedonicus] Length = 486 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 143/274 (52%), Gaps = 18/274 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP----PAMNRQRVEKG--FKTGIRVIDIFT 156 G+V N G ++ + G +EI + P P M Q K F+TGI+VID+ T Sbjct: 104 GKVFNVTGDILNNE-----GGEPIEITERWPIHRKPPMFDQLESKTQLFETGIKVIDLLT 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212 P G +IG+F G+G+GK+ L+ + D +S+ VGER RE + I E Sbjct: 159 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIMEMEEAG 218 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K+ +V DE P R L+A+T+AEYF K +VLL +D+I RF + E++T Sbjct: 219 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVST 278 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + Sbjct: 279 LLGRMPSAVGYQPNLADEMGVLQERI--TSTRGHSITSLQAIYVPADDYTDPAPATTFAH 336 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 LD L+R +A G YP VDPL S SR+ D + Sbjct: 337 LDATTELSREIASRGLYPAVDPLTSTSRILDPRY 370 >gi|88705417|ref|ZP_01103128.1| ATP synthase beta chain [Congregibacter litoralis KT71] gi|88700507|gb|EAQ97615.1| ATP synthase beta chain [Congregibacter litoralis KT71] Length = 465 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 94/305 (30%), Positives = 156/305 (51%), Gaps = 15/305 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + + I P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDERGPIGEKERA-SIHRAAPTYEELSASDDLLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210 ++G+F G+G+GK+ + + +S+ VGER RE +F + D Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQESKVVDIE 201 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 + K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 202 NPSNSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVS 261 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 262 ALLGRMPSAVGYQPTLAEEMGALQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFA 319 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD +VL+R +A +G YP VDPL S SR D +E + + +++ R++E +DI Sbjct: 320 HLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLLIGNEHYEAARGVQNVLQRYKELKDI 379 Query: 390 RLIGG 394 I G Sbjct: 380 IAILG 384 >gi|86135196|ref|ZP_01053778.1| ATP synthase F1, beta subunit [Polaribacter sp. MED152] gi|85822059|gb|EAQ43206.1| ATP synthase F1, beta subunit [Polaribacter sp. MED152] Length = 503 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 104/330 (31%), Positives = 159/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N G IDG +L K G + I P + + TGI+VID+ P G Sbjct: 91 GRLFNVTGDAIDGLGNLSKVGKDGLSIHRSAPKFEDLSVSTEVLFTGIKVIDLIEPYAKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 211 DDFMHSMEEGGWDLSKVDKAGMRDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 270 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 ++G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 271 EAQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 328 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 388 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + ++ R++E +DI I G Sbjct: 389 LGDEHYNCAQRVKEILQRYKELQDIIAILG 418 >gi|328957290|ref|YP_004374676.1| V-type sodium ATPase subunit B [Carnobacterium sp. 17-4] gi|328673614|gb|AEB29660.1| V-type sodium ATPase subunit B [Carnobacterium sp. 17-4] Length = 443 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 158/315 (50%), Gaps = 11/315 (3%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDL-VFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 GQV+ IN D + I+L D V GR + S GRV + +G+ DG Sbjct: 27 GQVLEINGDKAMVQIFEGSSGINLQDTKVRFLGRPLSLDVSEDMVGRVFDGMGRVNDGGP 86 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + +++I + M R ++ +TGI ID L GQ++ VF+GSG+ L Sbjct: 87 ELIP-EKTLDINGEAINPMARDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHKEL 145 Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 + AR SD V+ + +G E F+ED+ + +SV+ + +D+ I Sbjct: 146 AAQIARQATVKNSDEKFAVVFAAIGITFEEAEFFMEDFRKTGAIDRSVMFINLADDPAIE 205 Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R P A+T AEY + + D +VL+I+ +T + ++REI+ E+P RGYP +++ Sbjct: 206 RIATPKMALTAAEYLAYEKDMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTN 265 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 L L ER G KG++T + + + D+ PI D I +G I+L+R L G P Sbjct: 266 LATLYERAGRLVGGKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYNSGVQP 325 Query: 350 PVDPLASVSRLADKA 364 P+D L S+SRL DK Sbjct: 326 PIDALQSLSRLKDKG 340 >gi|326403872|ref|YP_004283954.1| ATP synthase subunit beta [Acidiphilium multivorum AIU301] gi|325050734|dbj|BAJ81072.1| ATP synthase subunit beta [Acidiphilium multivorum AIU301] Length = 476 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 157/307 (51%), Gaps = 18/307 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + + I + P + + TGI+V+D+ P G Sbjct: 88 GRILNVIGEPIDERGPI-PTTRTAPIHRQAPSFDEQATSAEILVTGIKVVDLLAPYLKGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + LGD Sbjct: 147 KIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLGD 206 Query: 213 NL---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 N K +V +E P R L+ +T+AEYF +G +VL +D+I RF + E Sbjct: 207 NTTEGSKVALVYGQMNEPPGARMRVGLSGLTMAEYFRDEEGQDVLFFVDNIFRFTQAGAE 266 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 267 VSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATS 324 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 S LD LNR++AE+G YP VDPL S SR D +E V+ + ++ ++ + Sbjct: 325 FSHLDATTTLNRAIAEKGIYPAVDPLDSTSRALDPRIVGEEHYNVAREVQRILQSYKSLQ 384 Query: 388 DIRLIGG 394 DI I G Sbjct: 385 DIIAILG 391 >gi|292572450|gb|ADE30365.1| ATP synthase beta chain [Rickettsia prowazekii Rp22] Length = 474 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 158/316 (50%), Gaps = 17/316 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N LG+PIDG + +S I P +N+ TGI+V+ Sbjct: 79 IRIPVGTETLGRIMNVLGEPIDGKGEIKSATIS-SIYKPAPDFINQSTERDILVTGIKVV 137 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + + Sbjct: 138 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEM 197 Query: 210 LGD---NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSI 259 + NL+ K +V +E P R L+ +TIAE F + G +VL +D+I Sbjct: 198 IASGVINLEEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNI 257 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ Sbjct: 258 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADD 315 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DP + + LD VL+R +AE G YP VDPL S S++ D ++ V+ + Sbjct: 316 LTDPAPSTSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEKHYGVARQVQQ 375 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 376 VLQTYKSLQDIIAILG 391 >gi|168059498|ref|XP_001781739.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666823|gb|EDQ53468.1| predicted protein [Physcomitrella patens subsp. patens] Length = 486 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 96/279 (34%), Positives = 152/279 (54%), Gaps = 26/279 (9%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+ ID +GD+S E I + P +++ + +TGI+V+D+ Sbjct: 95 ATLGRIINVIGEAIDE-----RGDISREHVLGIHREAPAFVDQGTEMEILETGIKVVDLL 149 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE +E IE Sbjct: 150 APYQRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGFSVFAG-VGERTREGNDLYKEMIE 208 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VL +D+I R Sbjct: 209 SGVIKLGDKQMESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLFFIDNIFR 268 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 269 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTQKGSITSVQAIYVPADDLT 326 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 DP + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 327 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 365 >gi|183206654|gb|ACC54525.1| ATP synthase beta subunit [Hanabusaya asiatica] Length = 472 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 200 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 201 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 260 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 261 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVXVPADDLTDP 318 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 319 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 378 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 379 YKELQDIITILG 390 >gi|261250659|ref|ZP_05943234.1| ATP synthase beta chain [Vibrio orientalis CIP 102891] gi|260939228|gb|EEX95215.1| ATP synthase beta chain [Vibrio orientalis CIP 102891] Length = 467 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G + + I + P + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDECGEIG-AEETYSIHREAPSYEEQSNEIALLETGVKVIDLVCPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEN 204 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR+ D E + + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQQTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|183206678|gb|ACC54537.1| ATP synthase beta subunit [Campanula spatulata subsp. filicaulis] Length = 498 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|148272349|ref|YP_001221910.1| F0F1 ATP synthase subunit beta [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|190358280|sp|A5CQ60|ATPB_CLAM3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|147830279|emb|CAN01213.1| ATP synthase beta chain [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 486 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 143/274 (52%), Gaps = 18/274 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP----PAMNRQRVEKG--FKTGIRVIDIFT 156 G+V N G ++ + G +EI + P P M Q K F+TGI+VID+ T Sbjct: 104 GKVFNVTGDILNNE-----GGEPIEITERWPIHRKPPMFDQLESKTQLFETGIKVIDLLT 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI-EDYLGD 212 P G +IG+F G+G+GK+ L+ + D +S+ VGER RE + I E Sbjct: 159 PYVQGGKIGLFGGAGVGKTVLIQEMIQRVAQDHGGVSVFAGVGERTREGNDLIMEMEEAG 218 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 K+ +V DE P R L+A+T+AEYF K +VLL +D+I RF + E++T Sbjct: 219 VFDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVST 278 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + Sbjct: 279 LLGRMPSAVGYQPNLADEMGVLQERI--TSTRGHSITSLQAIYVPADDYTDPAPATTFAH 336 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 LD L+R +A G YP VDPL S SR+ D + Sbjct: 337 LDATTELSREIASRGLYPAVDPLTSTSRILDPRY 370 >gi|4519274|dbj|BAA75552.1| ATP synthase beta-subunit [Volvox carteri] Length = 376 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D ++ K + ++ I P ++ F+TGI+V+D+ P G Sbjct: 32 GRIFNVLGEPVDNMGNV-KVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 90 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 91 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 150 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P LTA+T+AEYF +VL +D+I RF + E Sbjct: 151 LSDS--KVALVYGQMNEPPGACMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGAE 208 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 209 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 266 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R++E Sbjct: 267 FAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDCAQSVKKTLQRYKEL 325 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 326 QDIIAILG 333 >gi|294880511|ref|XP_002769041.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239872136|gb|EER01759.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 387 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 155/304 (50%), Gaps = 20/304 (6%) Query: 106 INALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 +N +G+PID LG + + I P V + TGI+V+D+ P G + Sbjct: 1 MNVIGEPID---ELGPIECNTRWPIHRPAPTFSEMDTVARQLYTGIKVVDLLAPYTKGGK 57 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL------ 214 IG+F G+G+GK+ ++ + + + VGER RE + + + + Sbjct: 58 IGLFGGAGVGKTVVIMELINNIAMKHGGFSVFAGVGERTREGNDLYHEMIAGGVIKKDKA 117 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 118 PGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDEEGQDVLLFIDNIFRFTQACSEVSA 177 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++L L ERI + + G+IT+V +V V D+ DP + + Sbjct: 178 LLGRIPSAVGYQPTLATDLGALQERI--TTTKNGSITSVQAVYVPADDLTDPAPATTFAH 235 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD + VL+R +AE G YP VDPL S SR+ D + E V+ ++ ++ ++ +DI Sbjct: 236 LDANTVLSRHIAELGIYPAVDPLDSTSRMLDPSIVGQEHYDVARAVQKVLQDYKSLQDII 295 Query: 391 LIGG 394 I G Sbjct: 296 AILG 299 >gi|183206690|gb|ACC54543.1| ATP synthase beta subunit [Campanula divaricata] Length = 485 Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 91 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 147 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 206 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 207 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 266 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 267 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 324 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 325 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 384 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 385 YKELQDIITILG 396 >gi|228016960|gb|ACP51784.1| ATP synthase CF1 beta subunit [Pinus banksiana] Length = 492 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 103/317 (32%), Positives = 161/317 (50%), Gaps = 24/317 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G ++ I P F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210 HG +IG+F G+G+GK+ L++ A++ V + ER RE E E + Sbjct: 161 RHGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219 Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++T G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 GSEVSTLLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGGYRPGVD 400 +E +DI I PG+D Sbjct: 397 KELQDIIAI----PGLD 409 >gi|183206662|gb|ACC54529.1| ATP synthase beta subunit [Campanula aizoides] Length = 495 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ P Sbjct: 102 ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 158 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSG 217 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 218 VINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 277 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 335 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R+ Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRY 395 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 396 KELQDIITILG 406 >gi|159045474|ref|YP_001534268.1| F0F1 ATP synthase subunit beta [Dinoroseobacter shibae DFL 12] gi|190358233|sp|A8LJR4|ATPB2_DINSH RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|157913234|gb|ABV94667.1| ATP synthase subunit beta [Dinoroseobacter shibae DFL 12] Length = 474 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 101/319 (31%), Positives = 163/319 (51%), Gaps = 20/319 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIR 150 G I GR++N +G+PID + + S I P + + TGI+ Sbjct: 75 GPITIPVGNATLGRIMNVIGEPIDEKGPV-EASESRAIHQPAPEFSEQSTGSEILVTGIK 133 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE---- 201 VID+ P G +IG+F G+G+GK+ L+ + KV + + VGER RE Sbjct: 134 VIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDL 191 Query: 202 VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLIL 256 E IE + DNL +S V V +E P R LT +T+AE F + G +VL + Sbjct: 192 YHEMIESNVIKPDNLSESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFV 251 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ ++ ERI + + G+IT++ +V V Sbjct: 252 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGQMQERI--TSTKGGSITSIQAVYVP 309 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSS 375 D+ DP + + LD VL+R+++E G YP VDPL S SR+ D +E ++ Sbjct: 310 ADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRILDPGIVGEEHYQVARD 369 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ R++ +DI I G Sbjct: 370 VQGILQRYKSLQDIIAILG 388 >gi|305666086|ref|YP_003862373.1| ATP synthase subunit B [Maribacter sp. HTCC2170] gi|88707520|gb|EAQ99763.1| ATP synthase subunit B [Maribacter sp. HTCC2170] Length = 502 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 104/330 (31%), Positives = 159/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG L K G + I + P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGIGDLPKAGKDGLPIHREAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 210 DDFLHSMEEGGWDLSKVDKKAMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 D + L+ R++E +DI I G Sbjct: 388 LGNDHYACAQRVKELLQRYKELQDIIAILG 417 >gi|253682571|ref|ZP_04863368.1| V-type sodium ATP synthase, B subunit [Clostridium botulinum D str. 1873] gi|253562283|gb|EES91735.1| V-type sodium ATP synthase, B subunit [Clostridium botulinum D str. 1873] Length = 460 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 98/318 (30%), Positives = 167/318 (52%), Gaps = 17/318 (5%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117 G+V+ I+ D I I+L D + GR I S GRV + LG+P DG Sbjct: 42 GKVLEISEDKALIQLFEGSTGINLKDTKTRFLGRPLEIGLSEDMLGRVFDGLGRPKDGGP 101 Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + K D++ E ++ +R + +TG+ ID L GQ++ VF+GSG+ Sbjct: 102 KIIPEEKRDINGEPLN----PFSRDYPSEFIQTGVSAIDGLNTLVRGQKLPVFSGSGLPH 157 Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD-NLKKSVVVVATSDES 227 + L + AR S+ V+ + +G E + FIED+ ++ ++V+ + +++ Sbjct: 158 AELAAQIARQARVLGSNSKFAVVFAAMGITFEEAQFFIEDFTKTGSIDRTVLFMNLANDP 217 Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 + R P A+T AE+ + KG +VL+I+ +T +A ++RE++ E+P RGYP + Sbjct: 218 AVERIATPRIALTTAEFLAYEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYL 277 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L L ER G + + G+IT + + + D+ PI D I +G I+L+R L ++G Sbjct: 278 YTDLSTLYERAGRVKGKPGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKKG 337 Query: 347 RYPPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 338 IMPPIDVLPSLSRLKDKG 355 >gi|228472842|ref|ZP_04057599.1| ATP synthase F1, beta subunit [Capnocytophaga gingivalis ATCC 33624] gi|228275424|gb|EEK14201.1| ATP synthase F1, beta subunit [Capnocytophaga gingivalis ATCC 33624] Length = 504 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG +L K G + I K P + V + TGI+VID+ P G Sbjct: 90 GRLFNVIGDGIDGLGNLPKEGQHGLPIHRKAPKFEDLSTVTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLMREMLESGIIKYG 209 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 + K+ V +E P R L+ +TIAEYF Sbjct: 210 EEFMHSMEEGGWDLSKVDREALKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 270 DGEGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + + L+ ++E +DI I G Sbjct: 388 LGKEHYECAQRVKELLQHYKELQDIIAILG 417 >gi|254509073|ref|ZP_05121176.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus 16] gi|219548006|gb|EED25028.1| ATP synthase F1, beta subunit [Vibrio parahaemolyticus 16] Length = 467 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G + + I + P + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDECGEIG-AEETYSIHREAPSYEEQSNEIALLETGVKVIDLVCPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEN 204 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR+ D E + + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQQTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|116256390|dbj|BAF35226.1| ATP synthase beta subunit [Volvox dissipatrix] Length = 376 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLGKG--DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D ++G + ++ I P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NMGNVIVEETLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R+ Sbjct: 264 ATTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYDRAQSVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|15425568|emb|CAC60247.1| ATP synthase beta subunit [Cyphia rogersii] Length = 489 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 + GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 96 SATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 212 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 271 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 329 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 330 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 389 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 390 YKELQDIITILG 401 >gi|326566564|gb|EGE16710.1| F0F1 ATP synthase subunit beta [Moraxella catarrhalis 12P80B1] Length = 473 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 157/317 (49%), Gaps = 28/317 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+++ LG+PID + + I + P + + +TGI+VID+ P Sbjct: 80 ATLGRIMDVLGRPIDEAGPV-NAEQKWSIHREAPSYDEQSNSTELLETGIKVIDLLCPFA 138 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------- 205 G ++G+F G+G+GK+ + + +S+ VGER RE +F Sbjct: 139 KGGKVGLFGGAGVGKTVNMMELINNIALKHSGLSVFAGVGERTREGNDFYHEMQEAGVVN 198 Query: 206 IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-------SSKGDNVLLILDS 258 ED+ K +V +E P R LT +T+AEYF + KG +VLL +D+ Sbjct: 199 TEDF---TQSKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDEATGKGRDVLLFVDN 255 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I R+ + E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D Sbjct: 256 IYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGLLQERI--TSTQSGSITSVQAVYVPAD 313 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377 + DP + + LD +VL+R +A +G YP VDPL S S D +E V+ + Sbjct: 314 DLTDPSPATTFAHLDATVVLSRDIASQGIYPAVDPLDSTSHQLDPQVIGEEHYSVARGVQ 373 Query: 378 HLIHRFEETRDIRLIGG 394 ++ R++E +DI I G Sbjct: 374 EVLQRYKELKDIIAILG 390 >gi|225678914|gb|EEH17198.1| ATP synthase subunit beta [Paracoccidioides brasiliensis Pb03] Length = 607 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K I ++ P + + + TGI+V+D+ P G Sbjct: 219 LGRIMNVTGDPIDERGPI-KHSKKAPIHAEAPEFVEQSTTAEVLVTGIKVVDLLAPYARG 277 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 278 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 336 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 337 DGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 396 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 397 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 454 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D +E ++ + + ++ ++ +DI Sbjct: 455 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYEVATRVQQMLQEYKSLQDI 514 Query: 390 RLIGG 394 I G Sbjct: 515 IAILG 519 >gi|307343722|emb|CBJ19278.1| atpD synthase beta subunit [Micromonospora sp. CR39] Length = 301 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 142/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|254468235|ref|ZP_05081641.1| ATP synthase F1, beta subunit [beta proteobacterium KB13] gi|207087045|gb|EDZ64328.1| ATP synthase F1, beta subunit [beta proteobacterium KB13] Length = 477 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 158/307 (51%), Gaps = 21/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+++ LG+PID +GK D I K P + +TGI+VID+ P Sbjct: 96 GRIMDVLGRPID---EVGKIDTKEHRSIHQKAPEFSELSPSVELLETGIKVIDLICPFAK 152 Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 G ++G+F G+G+GK+ L++ A+ V VGER RE +F + Sbjct: 153 GGKVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMSDAGVIK 211 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 D++K+S V V +E P R L+ +T+AE F +G +VL +D+I R+ + E Sbjct: 212 LDDMKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTE 271 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 272 VSALLGRMPSAVGYQPTLADEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATT 329 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETR 387 LD +VL+R +A G YP VDPL S SR D + D ++ + + +++E R Sbjct: 330 FQHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPQIVGEDHYQVARRVQATLQKYKELR 389 Query: 388 DIRLIGG 394 DI I G Sbjct: 390 DIIAILG 396 >gi|115443579|ref|YP_778598.1| ATP synthase CF1 beta chain [Bigelowiella natans] gi|122239917|sp|Q06J29|ATPB_BIGNA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|110810224|gb|ABG91430.1| ATP synthase CF1 beta chain [Bigelowiella natans] Length = 477 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 103/307 (33%), Positives = 161/307 (52%), Gaps = 22/307 (7%) Query: 104 RVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 R+ N LG+PID +LG K + + I P ++ + F+TGI+VID+ P G Sbjct: 93 RIFNVLGQPID---NLGDVKNEETRPIHRSAPEFVDLDIRLEIFETGIKVIDLLAPYRRG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------LGD 212 ++G+F G+G+GK+ L+ + +S+ VGER RE + + + D Sbjct: 150 GKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIVED 209 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF--SSKGDNVLLILDSITRFAHSIRE 268 NL +S V V +E P R L A+T+AE+F SSK D VLL +D++ RF + E Sbjct: 210 NLLESKVTLVYGQMNEPPGARMRVGLAALTMAEFFRDSSKQD-VLLFIDNVFRFVQAGSE 268 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP A + Sbjct: 269 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAAATT 326 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + D + + + R++E + Sbjct: 327 FAHLDATTVLSRGLASKGIYPAVDPLGSTSTMLQPWIVGDSHYECAQKVKQTLQRYKELQ 386 Query: 388 DIRLIGG 394 DI I G Sbjct: 387 DIIAILG 393 >gi|327329861|gb|EGE71615.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL097PA1] Length = 484 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 157/304 (51%), Gaps = 20/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-----PAMNRQRVE-KGFKTGIRVIDIFT 156 G V N G ++ D S ++E+ + P PA + E + +TGI+V+D+ T Sbjct: 104 GHVWNVTGDVLNADPS------TIEVTERWPIHRDPPAFDDLEPETEMLETGIKVLDLLT 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDY-LGD 212 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 158 PYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGGTSVFAGVGERTREGNDLINEMDEAG 217 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 LK + +V DE P R LT +T+AEYF + +VLL +D+I RF+ + E++T Sbjct: 218 VLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRDVQNQDVLLFIDNIFRFSQAGSEVST 277 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ +L ERI + +IT++ +V V D++ DP + + Sbjct: 278 LLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAVYVPADDYTDPAPATTFAH 335 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D E + + ++ R +E +DI Sbjct: 336 LDATTELSREIASRGLYPAVDPLTSTSRILDPLCVGQEHYDTATQVKQILQRNKELQDII 395 Query: 391 LIGG 394 I G Sbjct: 396 AILG 399 >gi|11559352|dbj|BAB18834.1| ATP synthase beta-subunit [Astrephomene gubernaculifera] Length = 376 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P ++ F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVIYEE-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK + ++ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYECAQNVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|294085411|ref|YP_003552171.1| F1-ATP synthase subunit beta [Candidatus Puniceispirillum marinum IMCC1322] gi|292664986|gb|ADE40087.1| F1-ATP Synthase Beta Chain [Candidatus Puniceispirillum marinum IMCC1322] Length = 474 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 93/306 (30%), Positives = 156/306 (50%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K I P +++ + TGI+V+D+ P G Sbjct: 87 LGRILNVIGEPVDEGKPV-KAKKYYPIHRAAPDYVDQSTEAEILVTGIKVVDLLAPYAKG 145 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + + Sbjct: 146 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMVESGVIMP 204 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 K+ +V +E P R LT +T+AEYF +G +VL +D+I RF + E+ Sbjct: 205 DGEGSKAALVYGQMNEPPGARSRVALTGLTLAEYFRDEEGQDVLFFVDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP + Sbjct: 265 SALLGRIPSAVGYQPTLATDMGALQERI--TTTNKGSITSVQAIYVPADDLTDPAPAASF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VDPL S SR+ D D + + ++ +++ +D Sbjct: 323 AHLDATTVLSRQIAELGIYPAVDPLDSSSRMLDPRIVGDHHYSIARQVQEVLQQYKSLQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|114328720|ref|YP_745877.1| F0F1 ATP synthase subunit beta [Granulibacter bethesdensis CGDNIH1] gi|122326328|sp|Q0BQE8|ATPB_GRABC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|114316894|gb|ABI62954.1| ATP synthase beta chain [Granulibacter bethesdensis CGDNIH1] Length = 476 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 18/308 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I + P + + TGI+V+D+ P G Sbjct: 87 LGRILNVIGEPIDERGPV-DAKKTYSIHREAPSFEEQAASAEILVTGIKVVDLLAPYLKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-------LG 211 +IG+F G+G+GK+ L+ + +S+ VGER RE + + LG Sbjct: 146 GKIGLFGGAGVGKTVLIQELINNIAKAHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLG 205 Query: 212 DNL---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 +N K +V +E P R L+ ++IAEYF +G +VL +D+I RF + Sbjct: 206 ENTTEGSKVALVYGQMNEPPGARARVALSGLSIAEYFRDEEGQDVLFFVDNIFRFTQAGA 265 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 266 EVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPAT 323 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VLNR+++E+G YP VDPL S SR D +E K+ + ++ ++ Sbjct: 324 SFAHLDATTVLNRAISEKGIYPAVDPLDSTSRSLDPRIVGEEHYKVARDVQRILQTYKSL 383 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 384 QDIIAILG 391 >gi|78213686|ref|YP_382465.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CC9605] gi|118573771|sp|Q3AHM2|ATPB_SYNSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|78198145|gb|ABB35910.1| ATP synthase F1, beta subunit [Synechococcus sp. CC9605] Length = 487 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 158/306 (51%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + I P + K F+TGI+VID+ P G Sbjct: 99 LGRIFNVLGEPVDEQGPVNT-TATAPIHRDAPNITELETKPKVFETGIKVIDLLAPYRQG 157 Query: 162 QRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------GD 212 ++G+F G+G+GK+ L+ + + + VGER RE + E++ D Sbjct: 158 GKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVINAD 217 Query: 213 NLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 +L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + E+ Sbjct: 218 DLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGSEV 277 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ER+ + +G+IT++ +V V D+ DP + Sbjct: 278 SALLGRMPSAVGYQPTLGTDVGALQERV--ASTVEGSITSIQAVYVPADDLTDPAPATTF 335 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VLNR+LA +G YP VDPL S S + A DE + ++ + R++E +D Sbjct: 336 AHLDATTVLNRALASKGIYPAVDPLDSTSTMLQPAVVGDEHYRTARAVQSTLQRYKELQD 395 Query: 389 IRLIGG 394 I I G Sbjct: 396 IIAILG 401 >gi|58039763|ref|YP_191727.1| F0F1 ATP synthase subunit beta [Gluconobacter oxydans 621H] gi|81819085|sp|Q5FRC5|ATPB1_GLUOX RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|58002177|gb|AAW61071.1| ATP synthase beta chain [Gluconobacter oxydans 621H] Length = 487 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 21/312 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + +L I P + + TGI+V+D+ P Sbjct: 95 ATLGRILNVVGEPIDERGPISS-ELRFPIHRPAPSFEEQAAASEILVTGIKVVDLLCPYL 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE------------VRE 204 G +IG+F G+G+GK+ ++ + +S+ VGER RE V + Sbjct: 154 KGGKIGLFGGAGVGKTVIIQELINNIAKAHGGVSVFAGVGERTREGNDLYFEMQDAGVIK 213 Query: 205 FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 ED + K +V +E P R LT +++AEYF +G +VL +D+I RF Sbjct: 214 IAEDGSTEG-SKVALVYGQMNEPPGARSRVALTGLSLAEYFRDEEGQDVLFFVDNIFRFT 272 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP Sbjct: 273 QAGSEVSALLGRIPSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDP 330 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VLNRS+AE G YP VDPL S SR D +E ++ + + Sbjct: 331 APAATFAHLDATTVLNRSIAEMGIYPAVDPLDSTSRSLDPKIVGEEHYQVARQVQQTLQT 390 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 391 YKGLQDIIAILG 402 >gi|183206688|gb|ACC54542.1| ATP synthase beta subunit [Campanula parryi] Length = 484 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 97 GVTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 212 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 272 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 330 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 331 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 390 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 391 YKELQDIITILG 402 >gi|183206672|gb|ACC54534.1| ATP synthase beta subunit [Campanula lusitanica] Length = 484 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 92 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 207 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 208 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 267 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 268 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 325 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 326 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 385 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 386 YKELQDIITILG 397 >gi|255954579|ref|XP_002568042.1| Pc21g10070 [Penicillium chrysogenum Wisconsin 54-1255] gi|211589753|emb|CAP95904.1| Pc21g10070 [Penicillium chrysogenum Wisconsin 54-1255] Length = 518 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 22/314 (7%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + PS GR+IN G PID + K I ++ P +++ + TGI+V+D+ Sbjct: 124 VGPS--TLGRIINVTGDPIDERGPI-KATKFAPIHAEPPAFVDQSTSAEILVTGIKVVDL 180 Query: 155 FTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 P G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 181 LAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFCG-VGERTREGNDLYHEMQ 239 Query: 211 --------GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 GD+ K +V +E P R LT +TIAEYF +G +VLL +D+I R Sbjct: 240 ETGVIQLEGDS--KVALVFGQMNEPPGARARVALTGLTIAEYFRDQEGQDVLLFIDNIFR 297 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ Sbjct: 298 FTQAGSEVSALLGRIPSAVGYQPTLAVDMGVMQERI--TTTQKGSITSVQAVYVPADDLT 355 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLI 380 DP + + LD VL+R ++E G YP VDPL S SR+ D +E +S + ++ Sbjct: 356 DPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIIGEEHYATASRVQQML 415 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 416 QEYKSLQDIIAILG 429 >gi|156086206|ref|XP_001610512.1| ATP synthase F1 beta chain [Babesia bovis T2Bo] gi|154797765|gb|EDO06944.1| ATP synthase F1 beta chain, putative [Babesia bovis] Length = 514 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 93/280 (33%), Positives = 146/280 (52%), Gaps = 28/280 (10%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFK-TGIRVIDIFTPLCHG 161 GR++N G P+DG + D + + + + QR ++ TGI+V+D+ P G Sbjct: 121 GRIMNVTGDPLDGCGPIP--DSKRLSIHREAVSFSDQRTDEALLITGIKVVDLLAPYAKG 178 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 +IG+F G+G+GK+ L+ ++ + F + + VGER RE E + + + Sbjct: 179 GKIGLFGGAGVGKTVLIMELINNVAKKHGGFS--VFAGVGERTREGNELYHEMMETGVIK 236 Query: 215 -------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSIT 260 K+ +V +E P R LT +T+AEYF +G +VLL +D+I Sbjct: 237 RRQLEDGTFDFSGSKAALVYGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIY 296 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ ++L L ERI + KG+IT+V +V V D+ Sbjct: 297 RFTQAGSEVSALLGRIPSAVGYQPTLATDLGALQERI--TTTNKGSITSVQAVYVPADDI 354 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 DP + S LD VL+RS+AE G YP VDPL S SR+ Sbjct: 355 TDPAPATTFSHLDATTVLSRSIAELGIYPAVDPLDSTSRM 394 >gi|183206674|gb|ACC54535.1| ATP synthase beta subunit [Campanula rotundifolia] Length = 498 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|260431391|ref|ZP_05785362.1| ATP synthase F1, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260415219|gb|EEX08478.1| ATP synthase F1, alpha subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 517 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 107/350 (30%), Positives = 174/350 (49%), Gaps = 17/350 (4%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113 +S G V+ + D + + +G +EIS+G+ V P + GRV++ALG P+ Sbjct: 65 SSGATGIVLDLESDRLGVVLLGGADEISVGEAVRRTRSVLSVPVGSALLGRVVDALGAPL 124 Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 D D D + + + P ++R+ V++ TG++VID P+ GQR + G Sbjct: 125 D-DGPPVDTDFRLPVETDAPAILDREAVQRPLATGLKVIDAAVPIGLGQRQLIIGDRQTG 183 Query: 174 KS-----TLLSMFARSDCFDKVIISLVGERGREVREFI---EDYLGDNLKKSVVVVATSD 225 K+ T+L+ R F I VG+RG V + + ED GD + S+V+ A + Sbjct: 184 KTSIAIDTILNQKQRG-VF--CIYCAVGQRGDAVAKVVGALED--GDAMANSIVISAGDE 238 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 + P L +AP A+T+A +FS +G +VL+++D +T A + RE++ P YP Sbjct: 239 DPPGLAYVAPFAAMTMARHFSDQGRDVLVVMDDLTHHARAYRELSLLLRRPPGREAYPGD 298 Query: 286 VFSELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 +F RLLER G G+IT + V +N + I ++ SI DG + L+ Sbjct: 299 IFYLHARLLERAGNFADAAGGGSITVLPVVETQAENLSAYIPTNLISITDGQVYLSPRQV 358 Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 + ++P VD SVSR+ KA SA + + +L + +FEE D G Sbjct: 359 RKNQFPAVDLGVSVSRVGGKAQSAAFRDVAGNLRVTLSQFEELEDFVRFG 408 >gi|306821773|ref|ZP_07455369.1| V-type ATP synthase, subunit B [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550242|gb|EFM38237.1| V-type ATP synthase, subunit B [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 459 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 101/341 (29%), Positives = 171/341 (50%), Gaps = 18/341 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GDDSLGKGDLSME 127 +V + G +S + F ++ S GRV + LG+PID G + L + + + Sbjct: 53 LVQLFESSTGINLSDSKVRFLGRSMELAVSPDMLGRVFDGLGRPIDDGPEILPEKRVDIN 112 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR---- 183 + P A R ++ +TG+ ID L GQ++ +F+ SG+ S L + AR Sbjct: 113 GVPINPAA--RDYPQEFIQTGVSAIDGLNTLVRGQKLPIFSASGLPHSRLAAQIARQAQV 170 Query: 184 ---SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAV 239 +D F V+ + +G E F E + L+++V+ V +++ + R P A+ Sbjct: 171 RGTTDPF-AVVFAAMGITFEEANYFTESFKDTGALERTVMFVNLANDPAVERISTPRMAL 229 Query: 240 TIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 T AEY + +G +VL+IL IT +A S+RE++ E+P RGYP ++++L + ER G Sbjct: 230 TAAEYLAFDQGMHVLVILTDITNYADSLREVSAARKEVPGRRGYPGYMYTDLATMYERAG 289 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + KG+IT + + + D+ PI D I +G I+L+R L + PPVD L S+S Sbjct: 290 RKKGSKGSITMIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYRQNLTPPVDVLPSLS 349 Query: 359 RLADKA-----WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 RL DK AD ++ L R +E +++ ++ G Sbjct: 350 RLKDKGIGEGKTRADHADTMNQLFAAYARGKEAKELMVVLG 390 >gi|296217690|ref|XP_002755124.1| PREDICTED: ATP synthase subunit beta, mitochondrial-like [Callithrix jacchus] Length = 529 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHTEAPEFMEMNVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I F + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFGFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+ ++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 377 AHLDATTVLSCAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 436 Query: 389 IRLIGG 394 I I G Sbjct: 437 IIAILG 442 >gi|238060776|ref|ZP_04605485.1| F0F1 ATP synthase subunit beta [Micromonospora sp. ATCC 39149] gi|237882587|gb|EEP71415.1| F0F1 ATP synthase subunit beta [Micromonospora sp. ATCC 39149] Length = 485 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 158/306 (51%), Gaps = 23/306 (7%) Query: 103 GRVINALGK--------PIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 G V NA+G+ + DD G I K P + + + +TGI+VID+ Sbjct: 105 GHVFNAIGECLNLTEGETLSPDDHWG-------IHRKAPAFADLEPKTEMLETGIKVIDL 157 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREFIEDYLG 211 P G +IG+F G+G+GK+ L+ M R + + + VGER RE + I + Sbjct: 158 LAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLIAEMTE 217 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 + K+ +V DE P R L+A+T+AEYF K VLL +D+I RF + E+ Sbjct: 218 SGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNIFRFTQAGSEV 277 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +T G +P A GY ++ E+ L ERI + IT++ ++ V D++ DP + Sbjct: 278 STLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADDYTDPAPATTF 335 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388 + LD L RS++++G YP VDPLAS SR LA + A+ + + + ++ ++++ +D Sbjct: 336 AHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKRILQKYKDLQD 395 Query: 389 IRLIGG 394 I I G Sbjct: 396 IIAILG 401 >gi|254483182|ref|ZP_05096415.1| ATP synthase F1, beta subunit [marine gamma proteobacterium HTCC2148] gi|214036553|gb|EEB77227.1| ATP synthase F1, beta subunit [marine gamma proteobacterium HTCC2148] Length = 489 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 103/339 (30%), Positives = 168/339 (49%), Gaps = 16/339 (4%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSACWC-GRVINALGKPIDGDDSLGKGDLSME 127 +V +G E +S G V + G P GR+++ LG PID +G+ + + Sbjct: 73 VVRAIAMGSSEGVSRGLAVENTGAPISVPVGIETLGRIMDVLGNPIDECGPIGEQERAA- 131 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ + + Sbjct: 132 IHRKAPTYEELSASDELLETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAT 191 Query: 188 DKVIISL---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPL 236 + +S+ VGER RE +F + N+ K +V +E P R L Sbjct: 192 EHSGLSVFAGVGERTREGNDFYFEMQESNVVDVENFSNSKVAMVYGQMNEPPGNRLRVAL 251 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T +T+AE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ER Sbjct: 252 TGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER 311 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 I + + G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S Sbjct: 312 I--TSTKVGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAARGIYPAVDPLDS 369 Query: 357 VSRLADKA-WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 SR D D + + ++ R++E +DI I G Sbjct: 370 TSRQLDPLIIGNDHYETARGVQSVLQRYKELKDIIAILG 408 >gi|4063550|gb|AAC98333.1| ATP synthase beta subunit [Helianthemum grandiflorum] Length = 456 Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 156/307 (50%), Gaps = 22/307 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+ +D SLG D + I P + + F+TGI+V+D+ Sbjct: 78 GVTLGRIFNVLGETVD---SLGPVDTGTTAPIHKPAPAFIQLETKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211 P G +IG+F G+G+GK+ L+ + A+S V VGER RE + + Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVSVFAG-VGERTREGNDLYMEMKES 193 Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +NL KS V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 194 GVINEENLSKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 253 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 254 QAGSEVSALLGRIPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 311 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + + + R Sbjct: 312 APATTFAHLDATTVLSRPLASKGIYPAVDPLDSKSTMLQPRIVGDEHYETAQQVKQTLQR 371 Query: 383 FEETRDI 389 ++E +DI Sbjct: 372 YKELQDI 378 >gi|288799877|ref|ZP_06405336.1| ATP synthase F1, beta subunit [Prevotella sp. oral taxon 299 str. F0039] gi|288333125|gb|EFC71604.1| ATP synthase F1, beta subunit [Prevotella sp. oral taxon 299 str. F0039] Length = 508 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 162/334 (48%), Gaps = 49/334 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR++N +GKPIDG ++L +ME + + PP + +K TGI+VID+ P Sbjct: 95 GRMLNVIGKPIDGMETL-----NMEGAYPIHREPPKFSELSTKKEMLATGIKVIDLLEPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ L+ + + + VGER RE + I D L Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVI 209 Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247 G+ KK++ +V +E P R L+ +T+AE F Sbjct: 210 KYGEKFKKAMEEGKWDLSLVDKEELKKSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269 Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 G +++L +D+I RF + E++ G +P A GY ++ SE+ + ERI + Sbjct: 270 HGGKDGEAADIMLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGVMQERI--TS 327 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G+IT+V +V V D+ DP + + LD L+R + E G YP VDPL S SR+ Sbjct: 328 TKNGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRIL 387 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D E + + ++ R++E +DI I G Sbjct: 388 DPLIVGKEHYQCAQRVKQILQRYKELQDIIAILG 421 >gi|312898813|ref|ZP_07758201.1| ATP synthase F1, beta subunit [Megasphaera micronuciformis F0359] gi|310619975|gb|EFQ03547.1| ATP synthase F1, beta subunit [Megasphaera micronuciformis F0359] Length = 472 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 94/307 (30%), Positives = 157/307 (51%), Gaps = 8/307 (2%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ GR+ N LG+ +D D K + I P + + +TGI+V+D Sbjct: 84 RVPVGQGVLGRIFNVLGEAVDKVDEPVKAEDYWPIHRPAPKFDDLSPTMEILETGIKVVD 143 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL 210 + P G +IG+F G+G+GK+ L+ + + + + VGER RE + + Sbjct: 144 LIAPYAKGGKIGLFGGAGVGKTVLIMELIHNVATEHGGYSVFTGVGERTREGNDLWNEMK 203 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIRE 268 + K+ +V +E P R LT +T+AEYF K +VLL +D+I RF + E Sbjct: 204 ESGVISKTALVYGQMNEPPGARMRVGLTGLTMAEYFRDKEHQDVLLFVDNIFRFIQAGSE 263 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP + Sbjct: 264 VSALLGRIPSAVGYQPTLGTDVGALQERI--TSTKEGSITSVQAVYVPADDLTDPAPAAT 321 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R +AE G YP VDPL S SR+ D +E + + ++ ++++ + Sbjct: 322 FAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPHIIGEEHYETAREVQAILQKYKDLQ 381 Query: 388 DIRLIGG 394 DI I G Sbjct: 382 DIIAILG 388 >gi|283794888|ref|YP_003359241.1| ATP synthase CF1 beta subunit [Cryptomonas paramecium] gi|253981860|gb|ACT46777.1| ATP synthase CF1 beta subunit [Cryptomonas paramecium] Length = 472 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 106/309 (34%), Positives = 161/309 (52%), Gaps = 24/309 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIM---SKVPPAM-NRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+ +D G E+M + PP + + + F+TGI+VID+ P Sbjct: 91 GRIFNVLGQVVDA-----LGPFHSEVMLPIHRTPPFFTDLETMPCLFETGIKVIDLLAPY 145 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L+ + + V + + +GER RE + + L Sbjct: 146 KRGGKIGLFGGAGVGKTVLIMELINNIAKAHNGVSVFAGIGERTREGNDLYNEMLESKVI 205 Query: 212 --DNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 +NL K +V +E P R LTA+T+AEYF S +VLL +D+I RF + Sbjct: 206 DLENLCNSKVTLVYGQMNEPPGARMRVGLTALTMAEYFRDSNKQDVLLFIDNIFRFVQAG 265 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ SE+ L ERI S KE G+IT++ +V V D+ DP Sbjct: 266 AEVSALLGRMPSAVGYQPTLASEMGALQERI-VSTKE-GSITSIQAVYVPADDLTDPAPA 323 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPL-ASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 + S LD VL+R LA +G YP VDPL +S S L S + + + + R++E Sbjct: 324 TTFSHLDATTVLSRVLAAKGIYPSVDPLESSSSMLQPGIVSGLHYETAQRVRYTLQRYKE 383 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 384 LQDIIAILG 392 >gi|324512115|gb|ADY45028.1| ATP synthase subunit beta [Ascaris suum] Length = 549 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 149/274 (54%), Gaps = 18/274 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P ++ ++ TGI+V+D+ P G Sbjct: 162 LGRIMNVIGEPIDERGPIPAKHFA-PIHAEAPAFVDMSVEQEILVTGIKVVDLLAPYAKG 220 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DY 209 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE D Sbjct: 221 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVIDL 279 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 G+N K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + E Sbjct: 280 KGNNSKVSLVY-GQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSE 338 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 339 VSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATT 396 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + LD VL+R +AE YP VDPL S SR+ D Sbjct: 397 FAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMD 430 >gi|317125555|ref|YP_004099667.1| ATP synthase F1 subunit beta [Intrasporangium calvum DSM 43043] gi|315589643|gb|ADU48940.1| ATP synthase F1 subcomplex beta subunit [Intrasporangium calvum DSM 43043] Length = 489 Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 146/273 (53%), Gaps = 8/273 (2%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--S 184 I K P + + F+TGI+VID+ TP G +IG+F G+G+GK+ L+ M AR Sbjct: 134 IHRKAPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAGVGKTVLIQEMIARVAR 193 Query: 185 DCFDKVIISLVGERGREVREF-IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAE 243 D + + VGER RE + +E L ++ +V DE P R L+A+T+AE Sbjct: 194 DHGGVSVFAGVGERTREGNDLMVEMEEAGVLGQTALVFGQMDEPPGTRLRVALSALTMAE 253 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF + +VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 254 YFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERITSTRG 313 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +IT++ ++ V D++ DP + + LD L+R +A G YP VDPL S SR+ D Sbjct: 314 H--SITSMQAIYVPADDYTDPAPATTFAHLDATTELSRDIASMGIYPAVDPLTSTSRILD 371 Query: 363 KAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + + E + + ++ R +E +DI I G Sbjct: 372 PRYVSQEHYSTAVRIRSILQRNKELQDIIAILG 404 >gi|307343732|emb|CBJ19283.1| atpD synthase beta subunit [Micromonospora sp. SG16] Length = 302 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + D ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQDHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|170293961|gb|ACB13074.1| ATP synthase beta subunit [Picocystis salinarum] Length = 366 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 160/314 (50%), Gaps = 28/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 C GR+ N LG+P+D LG+ + ++ I P + F+TGI+V+D+ P Sbjct: 19 CTLGRIFNVLGQPVD---ELGEVTAESTLPIHRSAPAFVELDTKLSIFETGIKVVDLLAP 75 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 76 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESG 134 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E L D+ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 135 VISESNLSDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRF 192 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ D Sbjct: 193 VQAGSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKTGSITSIQAVYVPADDLTD 250 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380 P + + LD VL+R+LA +G YP VDPL S S + + W E+ S+ + Sbjct: 251 PAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYSCAQSVKQTL 309 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 310 QRYKELQDIIAILG 323 >gi|312880231|ref|ZP_07740031.1| H(+)-transporting two-sector ATPase [Aminomonas paucivorans DSM 12260] gi|310783522|gb|EFQ23920.1| H(+)-transporting two-sector ATPase [Aminomonas paucivorans DSM 12260] Length = 471 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 101/350 (28%), Positives = 174/350 (49%), Gaps = 16/350 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+V+ I D +V + G ++ + F + S GR+ N G+PIDG Sbjct: 43 GRVLEITADKALVQVFEGTTGIDVDTTQVRFLGKVLTLPVSGDMLGRIFNGRGEPIDGGA 102 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 ++ + +++I +R + +TGI ID PL GQ++ +F+GSG+ + + Sbjct: 103 AIIP-ETALDINGFPMNPFSRDYPSEFIQTGISTIDGMNPLVRGQKLPIFSGSGLPHNRM 161 Query: 178 LSMFARSDCF------DKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 + AR V+ + +G E F+ED+ ++++V+ V +D+ I Sbjct: 162 AAQIARQATVISGHAAFAVVFAAMGITFEEASFFMEDFRKTGAIERTVMFVNLADDPAIE 221 Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R P A+T AEY + + D +VL+IL +T + ++REI+ E+P RGYP ++++ Sbjct: 222 RITTPRLALTCAEYLAFEKDMHVLVILTDLTNYCEALREISAARKEVPGRRGYPGYLYTD 281 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 L + ER G + G+IT + + D+ PI D I +G I+L+R L +G YP Sbjct: 282 LATMYERAGRLRGKSGSITQFPILTMPEDDKTHPIPDLTGYITEGQIILSRGLHRKGIYP 341 Query: 350 PVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDIRLIGG 394 PVD + S+SRL DK D L++ L R +E +++ +I G Sbjct: 342 PVDVMPSLSRLKDKGIGKGKTREDHADLMNQLFAAYARGKEAKELAVILG 391 >gi|256387189|gb|ACU80595.1| ATP synthase beta subunit [Childia trianguliferum] Length = 338 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 156/306 (50%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+IN +G+PID L + I PP + ++ +TGI+V+D+ P G Sbjct: 23 LGRIINVIGEPIDERGPL-NAKRRLPIHQDAPPFVEMSVEQENLETGIKVVDLLAPYAKG 81 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210 +IG+F G+G+GK+ L+ + A++ + + VGER RE + + L Sbjct: 82 GKIGLFGGAGVGKTVLIMELIANVAKAHG-GYAVFAGVGERTREGNDLYHEMIAGGVISL 140 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AE F +G +VLL +D+I RF + E+ Sbjct: 141 KDKSSKVSLVYGQMNEPPGARARVALTGLTVAENFRDHEGQDVLLFVDNIFRFTQAGSEV 200 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + KG+IT+V ++ V D+ DP + Sbjct: 201 SALLGRIPSAVGYQPTLATDMGSMQERI--TTTTKGSITSVQAIFVPADDLTDPAPATTF 258 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R ++E G YP VD L S SR+ D +E + + ++ ++ +D Sbjct: 259 AHLDATTVLSRGISELGIYPAVDLLDSTSRIMDFNIVGEEHYNIARGVQKILQDYKSLQD 318 Query: 389 IRLIGG 394 I I G Sbjct: 319 IIAILG 324 >gi|330834231|ref|YP_004408959.1| V-type ATP synthase subunit B [Metallosphaera cuprina Ar-4] gi|329566370|gb|AEB94475.1| V-type ATP synthase subunit B [Metallosphaera cuprina Ar-4] Length = 466 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 98/323 (30%), Positives = 166/323 (51%), Gaps = 20/323 (6%) Query: 83 LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141 +G V GR + S GR+ N LG P+D + KG+ + PA R Sbjct: 71 VGTTVRFLGRGLEVKISEEMLGRIFNPLGDPLDNGPMVIKGERRDINGEPINPA-TRDYP 129 Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLV 195 E+ +TGI ID L GQ++ +F+GSG+ + L + A+ V+ + Sbjct: 130 EEFIQTGISAIDGLNSLLRGQKLPIFSGSGLPANALAAQIAKQATVRGEESNFAVVFGAI 189 Query: 196 GERGREV---REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-N 251 G R E R+F E+ N + ++++ ++E P+++ + P TA+T+AEY + + D + Sbjct: 190 GVRYDEALFFRKFFEETGAIN--RVALIMSLANEPPVMKTLTPKTALTLAEYLAFEQDMH 247 Query: 252 VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVI 311 VL IL +T + ++REI+ + E+P GYP ++++L + ER G +KG+IT + Sbjct: 248 VLAILIDMTNYCEALREISASKEEVPGRGGYPGYMYTDLAQTYERAGKVVGKKGSITQMP 307 Query: 312 SVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSA 367 + + D+ PI D I +G I L+R+L +G YPP++ L S+SRLA + + Sbjct: 308 ILTMPNDDITHPIPDLTGYITEGQITLDRNLYNKGIYPPINVLMSLSRLAKDGIGEGKTR 367 Query: 368 DEKKLVSSLTHLIHRFEETRDIR 390 D+ K VS+ L + + D R Sbjct: 368 DDHKDVSN--QLFASYAKAVDTR 388 >gi|332652363|ref|ZP_08418108.1| V-type sodium ATPase, B subunit [Ruminococcaceae bacterium D16] gi|332517509|gb|EGJ47112.1| V-type sodium ATPase, B subunit [Ruminococcaceae bacterium D16] Length = 458 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 98/324 (30%), Positives = 163/324 (50%), Gaps = 17/324 (5%) Query: 61 QVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118 +V+ +N D +V + G ++ + F +++ S GRV N +G+PIDG Sbjct: 43 KVLEVNGDSAVVQLFENSAGINLAQSKIRFLGHPLQLAVSGDMLGRVFNGMGEPIDG--- 99 Query: 119 LGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 G L+ E AMN R + +TGI ID L GQ++ +F+GSG+ + Sbjct: 100 -GPAILADEYRDINGLAMNPAARNYPNEFIQTGISTIDGLNTLVRGQKLPIFSGSGLPHA 158 Query: 176 TLLSMFAR-SDCFD-----KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228 L + AR + D V+ + +G E F+ ++ + ++V+ +++ Sbjct: 159 ALAAQIARQAKVLDGESNFAVVFAAIGITFEESEFFVSEFKRTGAIDRTVLFTNLANDPA 218 Query: 229 ILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 + R P A+T AEY + K +VL+IL IT +A ++REI+ E+P RGYP ++ Sbjct: 219 VERIATPRMALTAAEYLAFEKNMHVLVILTDITNYAEALREISAAKKEVPGRRGYPGYLY 278 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 ++L + ER G ++G+IT + + + D+ PI D I +G I+L+R L G Sbjct: 279 TDLATMYERAGRQMGKEGSITMIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYRRGV 338 Query: 348 YPPVDPLASVSRLADKAWSADEKK 371 PPVD L S+SRL DK A + + Sbjct: 339 NPPVDVLPSLSRLKDKGTGAGKTR 362 >gi|297618720|ref|YP_003706825.1| H(+)-transporting two-sector ATPase [Methanococcus voltae A3] gi|297377697|gb|ADI35852.1| H(+)-transporting two-sector ATPase [Methanococcus voltae A3] Length = 464 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 94/277 (33%), Positives = 148/277 (53%), Gaps = 13/277 (4%) Query: 94 RISPSACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 ++ S GRV + GKPID G + + + + + P ++R +TGI I Sbjct: 83 KLGVSNDMLGRVFDGAGKPIDKGPEIISEEKIDINGSPLNP--VSRASPNAFVQTGISTI 140 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREF 205 D L GQ+I +F+GSG+ + L + AR + F V+ + +G E F Sbjct: 141 DGTNTLVRGQKIPIFSGSGLPHNMLAAQIARQAKVRGEGEQF-AVVFAAMGITSEESNYF 199 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263 IE++ L+K+VV + +D+ I R + P A+T AEY + KG +VL+IL +T + Sbjct: 200 IEEFRKTGALEKAVVFINLADDPAIERIITPRIALTTAEYLAYEKGMHVLVILTDLTNYC 259 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 ++REIA E+P RGYP ++++L L ER G + ++G +T + + + D+ P Sbjct: 260 EALREIAAARNEVPGRRGYPGYMYTDLASLYERAGRVKGKQGTVTQIPILTMPHDDITHP 319 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 I D I +G IVL+R L +G YPPVD L S+SRL Sbjct: 320 IPDLTGYITEGQIVLSRELNMKGVYPPVDVLPSLSRL 356 >gi|323496906|ref|ZP_08101934.1| F0F1 ATP synthase subunit beta [Vibrio sinaloensis DSM 21326] gi|323317980|gb|EGA70963.1| F0F1 ATP synthase subunit beta [Vibrio sinaloensis DSM 21326] Length = 467 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G + + I + P + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDECGDIG-AEETYSIHREAPSYEEQSNEIALLETGVKVIDLVCPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEN 204 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKSGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR+ D E + + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRMLDPLVVGQEHYDIARGVQQTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|332285686|ref|YP_004417597.1| ATP synthase beta chain [Pusillimonas sp. T7-7] gi|330429639|gb|AEC20973.1| ATP synthase beta chain [Pusillimonas sp. T7-7] Length = 473 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 157/305 (51%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + ++ I P + +TGI+VID+ P G Sbjct: 91 GRIMDVLGRPIDERGPIDSEEVRA-IHQDAPKFDELSPSVELLETGIKVIDLVCPFAKGG 149 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 ++G+F G+G+GK+ L++ A++ V VGER RE +F + D Sbjct: 150 KVGLFGGAGVGKTVNMLELINNIAKAHSGLSVFAG-VGERTREGNDFYHEMAEAGVIKMD 208 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 NLK+S V V +E P R L+ +T+AE F +G ++L +D+I R+ + E++ Sbjct: 209 NLKESKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVS 268 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + Sbjct: 269 ALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQ 326 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D +E V+ + + R++E RDI Sbjct: 327 HLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDI 386 Query: 390 RLIGG 394 I G Sbjct: 387 IAILG 391 >gi|218290061|ref|ZP_03494228.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius LAA1] gi|218239895|gb|EED07083.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius LAA1] Length = 467 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 164/327 (50%), Gaps = 16/327 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + + I P + + F+TGI+V+D+ P G Sbjct: 88 LGRIFNVLGETIDEKGPV-QAAQRWPIHRPAPAFGDLTTKTEIFETGIKVVDLLAPYVKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + + + + VGER RE + + L K+ Sbjct: 147 GKVGLFGGAGVGKTVLIQELIHNIAKEHGGYSVFAGVGERTREGNDLYHEMKESGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L+ +T+AEYF + +VL +D+I RF + E++ G + Sbjct: 207 CMVFGQMNEPPGARLRVALSGLTLAEYFRDVEQRDVLFFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +G+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--ASTVRGSITSIQAVYVPADDYTDPAPANTFTHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGY 395 VL R +A+ G YP VDPLAS SR +E V+ + ++ R+ E +DI I G Sbjct: 325 VLERRIADMGLYPAVDPLASTSRALQPDIVGEEHYQVARGVQAVLQRYRELQDIIAILGM 384 Query: 396 RPGVD---LILDKAVHQVPIIYDFLKQ 419 D LI+ +A I +FL Q Sbjct: 385 DELTDEDRLIVSRARK----IQNFLSQ 407 >gi|46909237|gb|AAT06136.1| ATP synthase beta subunit [Ephydatia cooperensis] Length = 427 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 89/276 (32%), Positives = 147/276 (53%), Gaps = 16/276 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P Sbjct: 61 AKTLGRIMNVIGEPIDERGPI-LSEKKAAIHAEAPEFVEMSVEQEILVTGIKVVDLLAPY 119 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDY----- 209 G +IG+F G+G+GK+ L+ + A++ V VGER RE + + Sbjct: 120 AKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIVSKV 178 Query: 210 --LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 L D+ K +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 179 ISLKDDTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAG 238 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +++ + ER + +KG+IT+V ++ V D+ DP Sbjct: 239 SEVSALLGRIPSAVGYQPTLATDMGTMQERT--TTTKKGSITSVQAIYVPADDLTDPAPA 296 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + + LD VL+R+++E G YP VDPL S SR+ D Sbjct: 297 TTFAHLDATTVLSRAISELGIYPAVDPLDSTSRIMD 332 >gi|183206636|gb|ACC54516.1| ATP synthase beta subunit [Siphocodon debilis] Length = 472 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 110/366 (30%), Positives = 175/366 (47%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + + G V G + GR Sbjct: 32 KGQDTLGQPINVTCEVQQLLGNNRVRAVSMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 91 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 92 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 148 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 149 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKASGVINEQ 207 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 208 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 267 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 268 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 325 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 326 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYKELQD 385 Query: 389 IRLIGG 394 I I G Sbjct: 386 IITILG 391 >gi|168186669|ref|ZP_02621304.1| V-type ATP synthase beta chain [Clostridium botulinum C str. Eklund] gi|169295344|gb|EDS77477.1| V-type ATP synthase beta chain [Clostridium botulinum C str. Eklund] Length = 460 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 87/285 (30%), Positives = 154/285 (54%), Gaps = 15/285 (5%) Query: 98 SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 S GRV + +G+P DG + + D++ E ++ +R + +TGI ID Sbjct: 82 SEDMLGRVFDGMGRPKDGGPKIIPEERRDINGEPLN----PFSRDYPSEFIQTGISAIDG 137 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIED 208 L GQ++ VF+GSG+ + L + AR SD V+ + +G E + FI+D Sbjct: 138 LNTLVRGQKLPVFSGSGLPHAELAAQIARQAKVLGSDSKFAVVFAAMGITFEEAQFFIQD 197 Query: 209 YLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266 + ++ ++V+ + +++ + R P A+T AE+ + KG +VL+I+ +T +A ++ Sbjct: 198 FTKTGSIDRTVLFMNLANDPAVERIATPRIALTTAEFLAYEKGMHVLVIMTDMTNYAEAL 257 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 RE++ E+P RGYP ++++L L ER G + + G+IT + + + D+ PI D Sbjct: 258 REVSAARKEVPGRRGYPGYLYTDLSTLYERAGRVKGKPGSITQIPILTMPEDDKTHPIPD 317 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 I +G I+L+R L ++G PP+D L S+SRL DK D+ + Sbjct: 318 LTGYITEGQIILSRELYKKGIMPPIDVLPSLSRLKDKGIGKDKTR 362 >gi|269101119|ref|YP_003289267.1| ATP synthase CF1, subunit beta [Ectocarpus siliculosus] gi|266631627|emb|CAV31298.1| ATP synthase CF1, subunit beta [Ectocarpus siliculosus] gi|270118757|emb|CAT18848.1| ATP synthase CF1, subunit beta [Ectocarpus siliculosus] Length = 481 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D D S G+ ++ I P + + F+TGI+V+D+ P G Sbjct: 96 LGRIFNVLGQPVD-DLSASVGEETLPIHRPAPAFTDLETKPAIFETGIKVVDLLAPYRRG 154 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +K+S V+ Sbjct: 155 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESGVIN 212 Query: 222 ATS-------------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 S +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 213 EKSLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 272 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP + Sbjct: 273 EVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTNQGSITSIQAVYVPADDLTDPAPAT 330 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + DE K + + R++E Sbjct: 331 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYKEL 390 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 391 QDIIAILG 398 >gi|254874081|ref|ZP_05246791.1| atpD, ATP synthase beta chain [Francisella tularensis subsp. tularensis MA00-2987] gi|254840080|gb|EET18516.1| atpD, ATP synthase beta chain [Francisella tularensis subsp. tularensis MA00-2987] Length = 372 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 155/296 (52%), Gaps = 12/296 (4%) Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRI 164 +N LG+PID + + + + PPA + + +TGI+V+D+ P G ++ Sbjct: 1 MNVLGEPIDEAGPIEYTE--KRSIHQAPPAYDELALSTEILETGIKVVDLICPFAKGGKV 58 Query: 165 GVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 G+F G+G+GK+ L++ A+ V VGER RE +F + N L K + Sbjct: 59 GLFGGAGVGKTVTMMELINNIAKEHSGYSVFAG-VGERTREGNDFYYEMKDSNVLDKVSL 117 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 V +E P R L+ +TIAE F + +VL+ +D+I R+ + E++ G +P A Sbjct: 118 VYGQMNEPPGNRLRVALSGLTIAEGFRDEKRDVLMFIDNIYRYTLAGTEVSALLGRMPSA 177 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 GY ++ +E+ L ERI + + G+IT+V +V V D+ DP + S LD IVL+ Sbjct: 178 VGYQPTLAAEMGALQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFSHLDATIVLS 235 Query: 340 RSLAEEGRYPPVDPLASVSRLADK-AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 R +AE G YP VDPL S SR D D + ++ ++ R++E +DI I G Sbjct: 236 RQIAELGIYPAVDPLDSTSRQLDPLVVGQDHYETARAVQKVLQRYKELKDIIAILG 291 >gi|72162806|ref|YP_290463.1| F0F1 ATP synthase subunit beta [Thermobifida fusca YX] gi|118573772|sp|Q47M82|ATPB_THEFY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|71916538|gb|AAZ56440.1| ATP synthase F1, beta subunit [Thermobifida fusca YX] Length = 480 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 161/296 (54%), Gaps = 16/296 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPL 158 G V NALG+P D + K +L ++ + + PA ++ + + TGI+VID+ TP Sbjct: 102 GHVFNALGEPQD----IPKSELQVKEYWPIHRPAPAFDQLEAKTEMLVTGIKVIDLLTPY 157 Query: 159 CHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ M R + F V + + VGER RE + F+E L Sbjct: 158 VRGGKIGLFGGAGVGKTVLIQEMITRIARNFGGVSVFAGVGERTREGTDLFLEMQEMGVL 217 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 + +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 218 PDTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLL 277 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 278 GRMPSAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLD 335 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 L+R ++++G YP VDPL S SR+ D + E ++ + ++ R + +D Sbjct: 336 ATTELSRPISQKGIYPAVDPLTSTSRILDPQYVGQEHYEVAQRVKEILQRNHDLQD 391 >gi|260774524|ref|ZP_05883437.1| ATP synthase beta chain [Vibrio metschnikovii CIP 69.14] gi|260610430|gb|EEX35636.1| ATP synthase beta chain [Vibrio metschnikovii CIP 69.14] Length = 467 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 152/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G + + I P + + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDERGEIG-AEETYSIHRLAPSYEEQSNSTELLETGVKVIDLICPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYHEMQEAGVVNIEK 204 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E V+ + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQSTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|146271661|emb|CAL25312.1| atpD beta synthase chain [Pseudomonas koreensis] Length = 284 Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 83/250 (33%), Positives = 136/250 (54%), Gaps = 7/250 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 36 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 95 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 96 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 155 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ Sbjct: 156 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 213 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD +VL+R +A G YP VDPL S SR D D + ++ Sbjct: 214 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQDHYDTARGVQYV 273 Query: 380 IHRFEETRDI 389 + R++E +DI Sbjct: 274 LQRYKELKDI 283 >gi|29336977|sp|Q9MTG8|ATPB_RAPSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|8052352|emb|CAB92327.1| ATPase beta subunit [Raphanus sativus] Length = 498 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 112/366 (30%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D S I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214 +IG+F G+G+GK++L+ + A++ V + ER RE +E E + + L Sbjct: 167 KIGLFGGAGVGKTSLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEL 225 Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 226 NLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +E + + + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IIAILG 409 >gi|268619096|gb|ACZ13324.1| ATP synthase beta chain [Bursaphelenchus xylophilus] Length = 533 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/277 (34%), Positives = 148/277 (53%), Gaps = 18/277 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+IN +G+PID + + + I + P + ++ TGI+V+D+ P Sbjct: 145 AETLGRIINVIGEPIDERGPIPTQNFA-PIHADAPEFVEMSVEQEILVTGIKVVDLLAPY 203 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE--- 207 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 204 AKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGV 262 Query: 208 -DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 D G N K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 263 IDLKGKNSKVSLVY-GQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQA 321 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP Sbjct: 322 GSEVSALLGRIPSAVGYQPTLATDMGGMQERI--TTTKKGSITSVQAIYVPADDLTDPAP 379 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + + LD VL+R +AE YP VDPL S SR+ D Sbjct: 380 ATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMD 416 >gi|313837674|gb|EFS75388.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL037PA2] gi|314972613|gb|EFT16710.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL037PA3] Length = 489 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/269 (33%), Positives = 144/269 (53%), Gaps = 9/269 (3%) Query: 133 PPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFD 188 PP + E + +TGI+V+D+ TP G +IG+F G+G+GK+ L+ M R + Sbjct: 138 PPTFDDLEPETEMLETGIKVLDLLTPYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGG 197 Query: 189 KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 + + VGER RE + I + LK + +V DE P R LT +T+AEYF Sbjct: 198 TSVFAGVGERTREGNDLINEMDEAGVLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRD 257 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF+ + E++T G +P A GY ++ E+ +L ERI + + Sbjct: 258 VQNQDVLLFIDNIFRFSQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHS 315 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ +V V D++ DP + + LD L+R +A G YP VDPL S SR+ D + Sbjct: 316 ITSMQAVYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAVDPLTSTSRILDPLYV 375 Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + + ++ R +E +DI I G Sbjct: 376 GQEHYDTATQVKQILQRNKELQDIIAILG 404 >gi|164566109|gb|ABY61197.1| ATP synthase beta subunit [Danaea media] Length = 394 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 161/308 (52%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|326335856|ref|ZP_08202035.1| ATP synthase F1 sector beta subunit [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692000|gb|EGD33960.1| ATP synthase F1 sector beta subunit [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 504 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG +L K G+ + I P + V + TGI+VID+ P G Sbjct: 90 GRLFNVIGDGIDGLGNLPKSGENGLPIHRPAPKFEDLSTVTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIRYG 209 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D K+ V +E P R L+ +TIAEYF Sbjct: 210 DEFMHSMEEGGWDLSKVDKKALKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 270 EEEGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + + L+ ++E +DI I G Sbjct: 388 LGKEHYECAQRVKELLQHYKELQDIIAILG 417 >gi|307343614|emb|CBJ19224.1| atpD synthase beta subunit [Micromonospora chokoriensis] Length = 302 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + D ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQDHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|78779915|ref|YP_398027.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT 9312] gi|118573719|sp|Q318V4|ATPB_PROM9 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|78713414|gb|ABB50591.1| ATP synthase F1 subcomplex beta subunit [Prochlorococcus marinus str. MIT 9312] Length = 486 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + D + I P + + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVKTKD-TAPIHRAAPKLTDLETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L +S V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + + DE K ++ + R++E Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYKTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|194333718|ref|YP_002015578.1| F0F1 ATP synthase subunit beta [Prosthecochloris aestuarii DSM 271] gi|194311536|gb|ACF45931.1| alternate F1F0 ATPase, F1 subunit beta [Prosthecochloris aestuarii DSM 271] Length = 493 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 97/294 (32%), Positives = 155/294 (52%), Gaps = 13/294 (4%) Query: 104 RVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 R+ + G PID G+ G + + + PP+++R+ F+TGI++ID+ TPL G Sbjct: 97 RMFDVFGNPIDRGEPPEG---VQWRPVHRNPPSLSRRSTHSEVFQTGIKIIDLLTPLERG 153 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKS 217 + G+F G+G+GK+ LL+ + +S+ +GER RE E + L Sbjct: 154 GKSGLFGGAGVGKTVLLTEMIHNMVSHHRGVSIFCGIGERCREGEELYREMKAAGVLDNM 213 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 V+V +E P R A+T+AEYF + +VLL++D+I RF + EI+ G++ Sbjct: 214 VMVFGQMNEPPGSRFRVGHAALTMAEYFRDDEHRDVLLLIDNIFRFIQAGSEISGMMGQM 273 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P GY ++ +EL +L ERI + G+IT++ +V V D+ DP A S L I Sbjct: 274 PSRLGYQPTMGTELSKLEERI--ANTGTGSITSIQAVYVPADDFTDPAAVHTFSHLSSSI 331 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 VL+R A EG +P VDPL SVS++A L + ++ ++ E +DI Sbjct: 332 VLSRKRAGEGLFPAVDPLQSVSKMASPTGIGHRHYNLSRDIRKVLAQYNELKDI 385 >gi|293603080|ref|ZP_06685514.1| ATP synthase F1 sector beta subunit [Achromobacter piechaudii ATCC 43553] gi|292818474|gb|EFF77521.1| ATP synthase F1 sector beta subunit [Achromobacter piechaudii ATCC 43553] Length = 467 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I P + +TGI+VID+ P G Sbjct: 92 GRIMDVLGRPIDEAGPI-QHEEKRGIHQSAPRFDELSPSVELLETGIKVIDLVCPFAKGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 151 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 209 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 210 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 270 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ + + R++E RDI I G Sbjct: 328 LSRDIASLGIYPAVDPLDSSSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILG 385 >gi|156530127|gb|ABU75160.1| AtpB [Eurycoma apiculata] Length = 498 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTSSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|183206522|gb|ACC54459.1| ATP synthase beta subunit [Triodanis coloradoensis] Length = 477 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPID---NLGPVDTLTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + + VGER RE + ++ Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKXHGGVSVFGGVGERTREGNDLYKEMKDSG 199 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 200 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 260 AGSEVSAXLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPA 317 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R+ Sbjct: 318 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRY 377 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 378 KELQDIITILG 388 >gi|146271653|emb|CAL25308.1| atpD beta synthase chain [Pseudomonas reinekei] gi|146271659|emb|CAL25311.1| atpD beta synthase chain [Pseudomonas jessenii] Length = 284 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 83/250 (33%), Positives = 136/250 (54%), Gaps = 7/250 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 36 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 95 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 96 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 155 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ Sbjct: 156 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 213 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHL 379 DP + + LD +VL+R +A G YP VDPL S SR D D + ++ Sbjct: 214 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLDPNVIGQDHYDTARGVQYV 273 Query: 380 IHRFEETRDI 389 + R++E +DI Sbjct: 274 LQRYKELKDI 283 >gi|119350545|gb|ABL63223.1| AtpB [Selenastrum capricornutum] Length = 387 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 36 ATLGRIFNVLGEPVD---ELGPVKNEATLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAP 92 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 93 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 152 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF Sbjct: 153 IVEKNLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLFFIDNIFRFV 210 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 211 QAGAEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDP 268 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W +K + + Sbjct: 269 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGDKHYDCAQRVKITLQ 327 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 328 RYKELQDIIAILG 340 >gi|2623222|gb|AAB86421.1| ATP synthase beta-subunit [Mus musculus] Length = 529 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 92/280 (32%), Positives = 148/280 (52%), Gaps = 16/280 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFIEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L+ + A++ V VGE+ RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGEKTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGAPTRVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 + LD VL+R++AE G YP VDPL S SR+ D +E Sbjct: 377 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNE 416 >gi|83746948|ref|ZP_00943994.1| ATP synthase beta chain [Ralstonia solanacearum UW551] gi|300702513|ref|YP_003744113.1| ATP synthase, f1 sector subunit beta [Ralstonia solanacearum CFBP2957] gi|83726368|gb|EAP73500.1| ATP synthase beta chain [Ralstonia solanacearum UW551] gi|299070174|emb|CBJ41465.1| ATP synthase, F1 sector, beta subunit [Ralstonia solanacearum CFBP2957] Length = 469 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 153/302 (50%), Gaps = 18/302 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+++ LG+PID G ++ E I K P +TGI+VID+ P Sbjct: 94 GRIMDVLGRPIDE-----AGPIACEEKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPF 148 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A+ V VGER RE +F + N Sbjct: 149 AKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNV 207 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ Sbjct: 208 LDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALL 267 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD Sbjct: 268 GRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLD 325 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 +VL+R +A G YP VDPL S SR D E ++ + + R++E RDI I Sbjct: 326 STVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAI 385 Query: 393 GG 394 G Sbjct: 386 LG 387 >gi|114561|sp|P26532|ATPB_PYLLI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|14181|emb|CAA42899.1| beta subunit of ATPase [Pylaiella littoralis] Length = 481 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D DS+G+ ++ I P + + F+TGI+V+D+ P Sbjct: 94 ATLGRIFNVLGQPVDNLSDSVGED--TLPIHRSAPAFTDLETKPAIFETGIKVVDLLAPY 151 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV 218 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +K+S Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESG 209 Query: 219 VVVATS-------------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 V+ T+ +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 210 VINETNLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 269 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPA 327 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE K + + R+ Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRY 387 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 388 KELQDIIAILG 398 >gi|311103598|ref|YP_003976451.1| ATP synthase F1 subunit beta [Achromobacter xylosoxidans A8] gi|310758287|gb|ADP13736.1| ATP synthase F1, beta subunit [Achromobacter xylosoxidans A8] Length = 466 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 153/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I P + +TGI+VID+ P G Sbjct: 91 GRIMDVLGRPIDEAGPI-QHEEKRGIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGG 149 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 269 SAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ + + R++E RDI I G Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILG 384 >gi|227487993|ref|ZP_03918309.1| ATP synthase beta chain [Corynebacterium glucuronolyticum ATCC 51867] gi|227542635|ref|ZP_03972684.1| ATP synthase beta chain [Corynebacterium glucuronolyticum ATCC 51866] gi|227092084|gb|EEI27396.1| ATP synthase beta chain [Corynebacterium glucuronolyticum ATCC 51867] gi|227181833|gb|EEI62805.1| ATP synthase beta chain [Corynebacterium glucuronolyticum ATCC 51866] Length = 480 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + LG+ I PP + + +TGI+VID+ TP G Sbjct: 100 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFSELEGKTEILETGIKVIDLLTPYVKGG 158 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + S VGER RE + F+E L+ + Sbjct: 159 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFSGVGERTREGTDLFLEMEEMGVLQDTA 218 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 219 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 278 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 279 SAVGYQPTLADEMGILQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATTE 336 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L+R +A +G YP V+PL S SR+ + + + V+ + ++ + +E +DI I G Sbjct: 337 LDRGIASKGIYPAVNPLTSTSRILEPSIVGERHYNVAQRVIGILQKNKELQDIIAILG 394 >gi|269103803|ref|ZP_06156500.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae CIP 102761] gi|268163701|gb|EEZ42197.1| ATP synthase beta chain [Photobacterium damselae subsp. damselae CIP 102761] Length = 468 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/333 (29%), Positives = 162/333 (48%), Gaps = 16/333 (4%) Query: 75 VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 +G + + G V + GR + GR++N LG ID +G+ + I P Sbjct: 58 MGTSDGLRRGLSVENTGRPIEVPVGTATLGRIMNVLGDAIDERGDIGEEE-RYAIHRAAP 116 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 + + +TG++VID+ P G +IG+F G+G+GK+ + + +S Sbjct: 117 SYEEQSNTTEMLETGVKVIDLICPFAKGGKIGLFGGAGVGKTVNMMELINNIAIQHSGLS 176 Query: 194 L---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIA 242 + VGER RE +F + + K +V +E P R LT +T+A Sbjct: 177 VFAGVGERTREGNDFYFEMQEAGVVNVENPAESKVAMVYGQMNEPPGNRLRVALTGLTMA 236 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ERI + Sbjct: 237 EKFRDEGRDVLLFIDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TST 294 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + G+IT+V +V V D+ DP + + LD +VL+R +A G YP +DPL S SR+ D Sbjct: 295 KSGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGLYPAIDPLDSTSRMLD 354 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + + ++ R++E +DI I G Sbjct: 355 PLVVGQEHYDIARGVQSILQRYKELKDIIAILG 387 >gi|168040544|ref|XP_001772754.1| predicted protein [Physcomitrella patens subsp. patens] gi|162675979|gb|EDQ62468.1| predicted protein [Physcomitrella patens subsp. patens] Length = 553 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/279 (34%), Positives = 152/279 (54%), Gaps = 26/279 (9%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+ ID +GD+S E I + P +++ + +TGI+V+D+ Sbjct: 162 ATLGRIINVIGEAIDE-----RGDISREHVLGIHREAPAFVDQGTEMEILETGIKVVDLL 216 Query: 156 TPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE 207 P G +IG+F G+G+GK+ L+ + A++ V VGER RE +E IE Sbjct: 217 APYQRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGFSVFAG-VGERTREGNDLYKEMIE 275 Query: 208 D---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 LGD +S +V +E P R LT +T+AE+F ++G +VL +D+I R Sbjct: 276 SGVIKLGDKQMESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLFFIDNIFR 335 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ Sbjct: 336 FTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTQKGSITSVQAIYVPADDLT 393 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 DP + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 394 DPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRM 432 >gi|94266419|ref|ZP_01290114.1| ATP synthase F1, beta subunit [delta proteobacterium MLMS-1] gi|93452961|gb|EAT03460.1| ATP synthase F1, beta subunit [delta proteobacterium MLMS-1] Length = 358 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 93/271 (34%), Positives = 143/271 (52%), Gaps = 9/271 (3%) Query: 131 KVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK 189 K P Q E +TGI+VID+ P G ++G+F G+G GK+ ++ + Sbjct: 5 KPAPLFTEQDTEVHVLETGIKVIDLLVPFPRGGKMGLFGGAGCGKTVIMMEMVNNIAMHH 64 Query: 190 VIISL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 IS+ VGER RE + + L K+ +V E P R LT ++ AEYF Sbjct: 65 GGISVFCGVGERTREGNDLYHEMKESGVLPKAALVYGQMTEPPGARSRVALTGLSAAEYF 124 Query: 246 -SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 +G +VLL +D+I RF + +E++ G +P A GY ++ ++L L ERI + K Sbjct: 125 RDEEGQDVLLFVDNIFRFTQAGQEVSALLGRIPSAVGYQPTLGTDLGGLQERI--TSTNK 182 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+ITAV V V D+ DP + + LDG +VL+R +AE G YP VDPL S SR+ D Sbjct: 183 GSITAVQCVYVPADDLTDPAPATTFAHLDGTVVLSRQIAELGIYPAVDPLDSTSRILDPN 242 Query: 365 WSADEKKLVSSLTHL-IHRFEETRDIRLIGG 394 ++ LV+ + + ++++ +DI I G Sbjct: 243 VLGEDHYLVARGVQMTLQKYKDLQDIIAILG 273 >gi|14717944|gb|AAK72714.1| ATP synthase beta subunit [Asimina triloba] Length = 384 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/278 (34%), Positives = 148/278 (53%), Gaps = 23/278 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +K+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGAVGERTREGNDLYM--EMKE 209 Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 S V+ +A S +E P R LTA+T+AEYF G NVLL +D+I RF Sbjct: 210 SGVINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGXNVLLFIDNIFRF 269 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ D Sbjct: 270 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTD 327 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 P + + LD VL+R LA +G YP VDPL S S + Sbjct: 328 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTM 365 >gi|69245112|ref|ZP_00603236.1| Sodium-transporting two-sector ATPase [Enterococcus faecium DO] gi|257879674|ref|ZP_05659327.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,230,933] gi|257882670|ref|ZP_05662323.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,231,502] gi|257883979|ref|ZP_05663632.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,231,501] gi|257890340|ref|ZP_05669993.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,231,410] gi|257892948|ref|ZP_05672601.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,231,408] gi|260559664|ref|ZP_05831844.1| sodium-transporting two-sector ATPase [Enterococcus faecium C68] gi|261208729|ref|ZP_05923166.1| sodium-transporting two-sector ATPase [Enterococcus faecium TC 6] gi|289565587|ref|ZP_06446034.1| V-type ATP synthase subunit B [Enterococcus faecium D344SRF] gi|293553106|ref|ZP_06673744.1| V-type ATP synthase beta chain [Enterococcus faecium E1039] gi|293560066|ref|ZP_06676570.1| V-type ATP synthase beta chain [Enterococcus faecium E1162] gi|293568808|ref|ZP_06680122.1| V-type ATP synthase beta chain [Enterococcus faecium E1071] gi|293572464|ref|ZP_06683444.1| V-type ATP synthase beta chain [Enterococcus faecium E980] gi|294614383|ref|ZP_06694299.1| V-type ATP synthase beta chain [Enterococcus faecium E1636] gi|294617541|ref|ZP_06697171.1| V-type ATP synthase beta chain [Enterococcus faecium E1679] gi|294622742|ref|ZP_06701697.1| V-type ATP synthase beta chain [Enterococcus faecium U0317] gi|314938127|ref|ZP_07845432.1| ATP synthase ab [Enterococcus faecium TX0133a04] gi|314943833|ref|ZP_07850568.1| ATP synthase ab [Enterococcus faecium TX0133C] gi|314949791|ref|ZP_07853101.1| ATP synthase ab [Enterococcus faecium TX0082] gi|314951199|ref|ZP_07854257.1| ATP synthase ab [Enterococcus faecium TX0133A] gi|314994430|ref|ZP_07859714.1| ATP synthase ab [Enterococcus faecium TX0133B] gi|314995626|ref|ZP_07860720.1| ATP synthase ab [Enterococcus faecium TX0133a01] gi|68195955|gb|EAN10388.1| Sodium-transporting two-sector ATPase [Enterococcus faecium DO] gi|257813902|gb|EEV42660.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,230,933] gi|257818328|gb|EEV45656.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,231,502] gi|257819817|gb|EEV46965.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,231,501] gi|257826700|gb|EEV53326.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,231,410] gi|257829327|gb|EEV55934.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,231,408] gi|260074332|gb|EEW62654.1| sodium-transporting two-sector ATPase [Enterococcus faecium C68] gi|260077231|gb|EEW64951.1| sodium-transporting two-sector ATPase [Enterococcus faecium TC 6] gi|289162669|gb|EFD10522.1| V-type ATP synthase subunit B [Enterococcus faecium D344SRF] gi|291588525|gb|EFF20359.1| V-type ATP synthase beta chain [Enterococcus faecium E1071] gi|291592691|gb|EFF24284.1| V-type ATP synthase beta chain [Enterococcus faecium E1636] gi|291596147|gb|EFF27410.1| V-type ATP synthase beta chain [Enterococcus faecium E1679] gi|291597793|gb|EFF28930.1| V-type ATP synthase beta chain [Enterococcus faecium U0317] gi|291602697|gb|EFF32911.1| V-type ATP synthase beta chain [Enterococcus faecium E1039] gi|291605933|gb|EFF35363.1| V-type ATP synthase beta chain [Enterococcus faecium E1162] gi|291607526|gb|EFF36868.1| V-type ATP synthase beta chain [Enterococcus faecium E980] gi|313590214|gb|EFR69059.1| ATP synthase ab [Enterococcus faecium TX0133a01] gi|313591202|gb|EFR70047.1| ATP synthase ab [Enterococcus faecium TX0133B] gi|313596678|gb|EFR75523.1| ATP synthase ab [Enterococcus faecium TX0133A] gi|313597557|gb|EFR76402.1| ATP synthase ab [Enterococcus faecium TX0133C] gi|313642474|gb|EFS07054.1| ATP synthase ab [Enterococcus faecium TX0133a04] gi|313643864|gb|EFS08444.1| ATP synthase ab [Enterococcus faecium TX0082] Length = 458 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 102/317 (32%), Positives = 160/317 (50%), Gaps = 15/317 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116 GQV+ + D +V I G + + F + S GRV + LG+P D G Sbjct: 42 GQVLEVQEDKAMVQIFEGTSGINLRDSSVRFLGHPLELGVSEDMIGRVFDGLGRPKDNGP 101 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + L + L +I +V + R ++ +TGI ID L GQ++ VF+GSG+ Sbjct: 102 EILPEKHL--DINGEVINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKE 159 Query: 177 LLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228 L + AR SD F V+ + +G E F+ED+ + +SV+ + +++ Sbjct: 160 LAAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLANDPA 218 Query: 229 ILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 I R P A+T AEY + KG +VL+I+ +T +A ++REI+ E+P RGYP ++ Sbjct: 219 IERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLY 278 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + L L ER G KG++T + + + D+ PI D I +G I+L R L + G Sbjct: 279 TNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGI 338 Query: 348 YPPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 339 QPPIDVLPSLSRLKDKG 355 >gi|51473969|ref|YP_067726.1| F0F1 ATP synthase subunit beta [Rickettsia typhi str. Wilmington] gi|81826277|sp|Q68VU8|ATPB_RICTY RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|51460281|gb|AAU04244.1| ATP synthase [Rickettsia typhi str. Wilmington] Length = 474 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 94/309 (30%), Positives = 156/309 (50%), Gaps = 17/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PIDG + +S I P +N+ TGI+V+D+ P Sbjct: 86 ATLGRIMNVVGEPIDGKGEIKSSTIS-SIYKPAPDFINQSTERDILVTGIKVVDLLAPYT 144 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD---N 213 G +IG+F G+G+GK+ L+ + + + VGER RE + + + N Sbjct: 145 KGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIASGVIN 204 Query: 214 LK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSI 266 L+ K +V +E P R L+ +TIAE F + G +VL +D+I RF + Sbjct: 205 LEAPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNIFRFTQAG 264 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP Sbjct: 265 AEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADDLTDPAPS 322 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + + LD VL+R +AE G YP VDPL S S++ D +E V+ + ++ ++ Sbjct: 323 TSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQVLQTYKS 382 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 383 LQDIIAILG 391 >gi|19552435|ref|NP_600437.1| F0F1 ATP synthase subunit beta [Corynebacterium glutamicum ATCC 13032] gi|21903378|sp|P42464|ATPB_CORGL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21323979|dbj|BAB98605.1| F0F1-type ATP synthase beta subunit [Corynebacterium glutamicum ATCC 13032] Length = 483 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 165/300 (55%), Gaps = 11/300 (3%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG +D D SL ++ + + PP+ ++ + + +TGI+VID+ TP Sbjct: 103 GHVFNALGDCLD-DVSLNNNPEIERWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYVK 161 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ Sbjct: 162 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQD 221 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G Sbjct: 222 TALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGR 281 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 282 MPSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDAT 339 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L+RS+A +G YP V+PL S SR+ + A + VS + ++ + +E +DI I G Sbjct: 340 TELDRSIASKGIYPAVNPLTSTSRILEPAIVGERHYEVSQRVIGILQKNKELQDIIAILG 399 >gi|170294003|gb|ACB13095.1| ATP synthase beta subunit [Chaetomorpha linum] Length = 366 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GR+ N +G+P+DG ++ + S+ I P ++ F+TGI+V+D+ P Sbjct: 18 ATTLGRIFNVVGQPVDGLENSAH-EKSLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPY 76 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 136 Query: 212 --DNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +NL K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 NENNLLDSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAG 196 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 197 SEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPA 254 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LDG VL+R LA +G YP VDPL S S + + +E ++ + R++E Sbjct: 255 TTFAHLDGTTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGEEHYNTARAVQSTLQRYKE 314 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 315 LQDIIAILG 323 >gi|33594186|ref|NP_881830.1| F0F1 ATP synthase subunit beta [Bordetella pertussis Tohama I] gi|81836194|sp|Q7VU44|ATPB_BORPE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|33564261|emb|CAE43553.1| ATP synthase beta chain [Bordetella pertussis Tohama I] gi|332383600|gb|AEE68447.1| F0F1 ATP synthase subunit beta [Bordetella pertussis CS] Length = 466 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I P + +TGI+VID+ P G Sbjct: 91 GRIMDVLGRPIDEAGPIAS-DEKRAIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGG 149 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 269 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E ++ + + R++E RDI I G Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYQVARGVQQTLQRYKELRDIIAILG 384 >gi|161529198|ref|YP_001583024.1| V-type ATP synthase subunit B [Nitrosopumilus maritimus SCM1] gi|238686916|sp|A9A2Q9|VATB_NITMS RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|160340499|gb|ABX13586.1| Sodium-transporting two-sector ATPase [Nitrosopumilus maritimus SCM1] Length = 461 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 165/309 (53%), Gaps = 20/309 (6%) Query: 102 CGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV + LG+P DG D + D ++I + R+ + +TG+ VID L Sbjct: 90 LGRVFDGLGRPKDGLPDPIA--DQFIDINGEPMNPEQREYPKDFIQTGVSVIDGMITLVR 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN 213 GQ++ +F+GSG+ + L + AR D F V+ + +G + E E+ L ++ Sbjct: 148 GQKLPIFSGSGMSHNLLAAQIARQASVIGTQDDF-AVVFAAIGVQYSEA-EYFRRSLEES 205 Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIA 270 LK+SV+ + T+D+ I R + P A+T+AEY + + G +VL+IL +T +A ++REI+ Sbjct: 206 GALKRSVLFLNTADDPAIERIITPRVALTVAEYLAFELGMHVLVILTDMTNYAEALREIS 265 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P +GYP ++++L + ER G +KG++T V + + D+ PI D Sbjct: 266 AAREEVPGRKGYPGYLYTDLSTIYERAGKLNGKKGSVTQVPILSMPSDDITHPIPDLTGY 325 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEE 385 I +G IVL R L +G YPPV+ L S+SRL + + AD ++ + + R +E Sbjct: 326 ITEGQIVLGRDLFRQGVYPPVNILMSLSRLMKDGIGEGSTRADHGEISNQVYDAYSRAQE 385 Query: 386 TRDIRLIGG 394 R + I G Sbjct: 386 VRALAGIVG 394 >gi|326799697|ref|YP_004317516.1| ATP synthase subunit beta [Sphingobacterium sp. 21] gi|326550461|gb|ADZ78846.1| ATP synthase subunit beta [Sphingobacterium sp. 21] Length = 501 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 106/330 (32%), Positives = 163/330 (49%), Gaps = 42/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHG 161 GRV N +G IDG L K + + +PP E + TGI+VID+ P G Sbjct: 89 GRVFNVVGDAIDGIKELDKSN--GRPIHNLPPKFEDLSTETEVLYTGIKVIDLLEPYAKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + + + + + VGER RE +RE IE Sbjct: 147 GKIGLFGGAGVGKTVLIQELINNIAKAYSGLSVFAGVGERTREGNDLLREMIESGIIKYG 206 Query: 208 -DYL-----GD-NLK----------KSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 ++L GD NL+ K+ V +E P R L+ +TIAEYF Sbjct: 207 DEFLHSMEKGDWNLEQVDTDALKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGDG 266 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 267 EGAGKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TSTKRG 324 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ + Sbjct: 325 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILNPTI 384 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + + R++E +DI I G Sbjct: 385 LGDEHYNTAQRVKETLQRYKELQDIIAILG 414 >gi|269216175|ref|ZP_06160029.1| ATP synthase F1, beta subunit [Slackia exigua ATCC 700122] gi|269130434|gb|EEZ61512.1| ATP synthase F1, beta subunit [Slackia exigua ATCC 700122] Length = 485 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 158/298 (53%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+P+D + + + M I P + + F+TGI+ ID+ P G Sbjct: 106 GRIWNVMGQPVD-EKPMPEVSGYMPIHRPAPDYESLSTTTEIFETGIKAIDLIEPFIRGG 164 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 + G+F G+G+GK+ L++ A+ V VGER RE + F+E ++K+ Sbjct: 165 KTGLFGGAGVGKTVIIQELINNLAQEHSGTSVFTG-VGERTREGTDLFLEMSESGVVEKT 223 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L +T AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 224 CLVYGQMNEPPGARLRVGLAGLTEAEYFRDQGQDVLLFIDNIFRFTQAGSEVSALLGRMP 283 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD V Sbjct: 284 SAVGYQPTLATEMGDLQERI--TSTTTGSITSVQAVYVPADDLTDPAPATTFTHLDAKTV 341 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+RS+AE G YP VDPL S SR + A +E ++ + + L+ +++ +DI I G Sbjct: 342 LSRSIAELGIYPAVDPLESTSRALEPAIVGEEHYRVATGIQELLQNYKDLQDIIAILG 399 >gi|118917348|dbj|BAF40460.1| ATP synthase beta subunit [Pycnocoma cornuta] Length = 489 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + IS+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGISVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|62390100|ref|YP_225502.1| F0F1 ATP synthase subunit beta [Corynebacterium glutamicum ATCC 13032] gi|145295351|ref|YP_001138172.1| F0F1 ATP synthase subunit beta [Corynebacterium glutamicum R] gi|166201698|sp|A4QDH3|ATPB_CORGB RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|560817|emb|CAA54202.1| ATPase beta-subunit [Corynebacterium glutamicum] gi|9757621|dbj|BAB08157.1| H+-ATPase beta subunit [Corynebacterium glutamicum] gi|10039452|dbj|BAB13360.1| H+-ATPase beta subunit [Brevibacterium flavum] gi|41325436|emb|CAF19916.1| ATP SYNTHASE ALPHA SUBUNIT [Corynebacterium glutamicum ATCC 13032] gi|140845271|dbj|BAF54270.1| hypothetical protein [Corynebacterium glutamicum R] Length = 483 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 165/300 (55%), Gaps = 11/300 (3%) Query: 103 GRVINALGKPIDGDDSLGKG-DLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCH 160 G V NALG +D D SL ++ + + PP+ ++ + + +TGI+VID+ TP Sbjct: 103 GHVFNALGDCLD-DVSLNNNPEIERWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYVK 161 Query: 161 GQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ Sbjct: 162 GGKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQD 221 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G Sbjct: 222 TALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGR 281 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 282 MPSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDAT 339 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L+RS+A +G YP V+PL S SR+ + A + VS + ++ + +E +DI I G Sbjct: 340 TELDRSIASKGIYPAVNPLTSTSRILEPAIVGERHYEVSQRVIGILQKNKELQDIIAILG 399 >gi|183206596|gb|ACC54496.1| ATP synthase beta subunit [Prismatocarpus diffusus] Length = 488 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 209 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIITILG 399 >gi|164566051|gb|ABY61168.1| ATP synthase beta subunit [Danaea alata] gi|164566053|gb|ABY61169.1| ATP synthase beta subunit [Danaea alata] Length = 394 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 161/308 (52%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|122919647|pdb|2C61|A Chain A, Crystal Structure Of The Non-Catalytic B Subunit Of A-Type Atpase From M. Mazei Go1 gi|122919648|pdb|2C61|B Chain B, Crystal Structure Of The Non-Catalytic B Subunit Of A-Type Atpase From M. Mazei Go1 gi|240104341|pdb|3DSR|A Chain A, Adp In Transition Binding Site In The Subunit B Of The Energy Converter A1ao Atp Synthase gi|240104342|pdb|3DSR|B Chain B, Adp In Transition Binding Site In The Subunit B Of The Energy Converter A1ao Atp Synthase Length = 469 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 30/361 (8%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINA 108 + G + GQV+ + DIV + G G ++F ++ S GR+++ Sbjct: 41 IKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLDKDCGVIFTGETLKLPASVDLLGRILSG 100 Query: 109 LGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 G+P DG D L +M +++PP K F +TGI ID L G Sbjct: 101 SGEPRDGGPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 Q++ +F+ SG+ + + AR S+ V+ + +G E + F+ D+ L Sbjct: 153 QKLPIFSASGLPHNEIALQIARQASVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGAL 212 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273 +++VV + +D+ + R + P A+T AEY + G +VL+IL IT +A ++R++ Sbjct: 213 ERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAAR 272 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 E+P RGYP ++++L L ER G + KG++T + + + GD+ PI D I + Sbjct: 273 NEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITE 332 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDI 389 G IV+ R L +G YPP++ L S+SRL + A ++ K VS + + E RD+ Sbjct: 333 GQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSD--QMYAGYAEGRDL 390 Query: 390 R 390 R Sbjct: 391 R 391 >gi|314927445|gb|EFS91276.1| ATP synthase F1, beta subunit [Propionibacterium acnes HL044PA1] gi|328907530|gb|EGG27296.1| ATP synthase F1, beta subunit [Propionibacterium sp. P08] Length = 484 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/269 (33%), Positives = 144/269 (53%), Gaps = 9/269 (3%) Query: 133 PPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFD 188 PP + E + +TGI+V+D+ TP G +IG+F G+G+GK+ L+ M R + Sbjct: 133 PPTFDDLEPETEMLETGIKVLDLLTPYVKGGKIGLFGGAGVGKTVLIQEMIYRIAHNFGG 192 Query: 189 KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS 247 + + VGER RE + I + LK + +V DE P R LT +T+AEYF Sbjct: 193 TSVFAGVGERTREGNDLINEMDEAGVLKDTALVFGQMDEPPGTRLRIALTGLTMAEYFRD 252 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 + +VLL +D+I RF+ + E++T G +P A GY ++ E+ +L ERI + + Sbjct: 253 VQNQDVLLFIDNIFRFSQAGSEVSTLLGRMPSAVGYQPNLADEMGQLQERI--TSTRGHS 310 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ +V V D++ DP + + LD L+R +A G YP VDPL S SR+ D + Sbjct: 311 ITSMQAVYVPADDYTDPAPATTFAHLDATTELSREIASRGLYPAVDPLTSTSRILDPLYV 370 Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + + ++ R +E +DI I G Sbjct: 371 GQEHYDTATQVKQILQRNKELQDIIAILG 399 >gi|55056890|emb|CAF21946.1| ATP synthase beta subunit [Araucaria araucana] Length = 448 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 107/365 (29%), Positives = 178/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K+ + GQ+I++ ++ V + + + G VF G + A GR Sbjct: 23 KDKNTAGQLIQVTCEVQQLLGNNKVRAIAMSATDGLMRGMKVFDTGAPLSVPVGAATLGR 82 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D LG + + + + PA + + F+TGI+V+D+ P G Sbjct: 83 IFNVLGEPVD---DLGPVNARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGG 139 Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ L+ + V + S VGER RE + + + Sbjct: 140 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQN 199 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 200 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 259 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 260 ALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 317 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + + +E + + + R++E +DI Sbjct: 318 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDI 377 Query: 390 RLIGG 394 I G Sbjct: 378 IAILG 382 >gi|268609336|ref|ZP_06143063.1| V-type ATP synthase subunit B [Ruminococcus flavefaciens FD-1] Length = 458 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 97/329 (29%), Positives = 168/329 (51%), Gaps = 16/329 (4%) Query: 81 ISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR 138 I+L D +VF + + S GRV + LG+PID + D M++ + R Sbjct: 63 INLQDSSVVFSGHQMELGVSEDMLGRVFDGLGRPIDDGPEIIP-DKRMDVNGLPMNPVAR 121 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVII 192 + ++ +TG+ ID L GQ++ +F+ SG+ + + AR D V+ Sbjct: 122 KYPQEFIQTGVSAIDGLNTLVRGQKLPIFSASGLPHAQFAAQIARQAKVRGKDEQFAVVF 181 Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGD 250 + +G E F++ + L ++V+ + +++S I R P A+T AEY + KG Sbjct: 182 AAMGITFEESEFFVKSFRETGALDRTVLFINLANDSAIERLATPKMALTAAEYLAFEKGM 241 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VL+IL IT +A ++RE++ E+P RGYP ++++L + ER G ++G+IT + Sbjct: 242 HVLVILTDITNYADALREVSAARKEVPGRRGYPGYMYTDLATIYERAGRQADKEGSITMI 301 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----W 365 + + D+ PI D I +G I+L+R L +G PPVD L S+SRL DK Sbjct: 302 PILTMPEDDKTHPIPDLTGYITEGQIILSRELYRKGINPPVDVLPSLSRLKDKGIGEGKT 361 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 SAD ++ L R ++ +++ ++ G Sbjct: 362 SADHSDTMNQLFSAYARGKDAKELMVVLG 390 >gi|258616717|ref|ZP_05714487.1| V-type ATP synthase subunit B [Enterococcus faecium DO] Length = 413 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 102/317 (32%), Positives = 160/317 (50%), Gaps = 15/317 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116 GQV+ + D +V I G + + F + S GRV + LG+P D G Sbjct: 42 GQVLEVQEDKAMVQIFEGTSGINLRDSSVRFLGHPLELGVSEDMIGRVFDGLGRPKDNGP 101 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + L + L +I +V + R ++ +TGI ID L GQ++ VF+GSG+ Sbjct: 102 EILPEKHL--DINGEVINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKE 159 Query: 177 LLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228 L + AR SD F V+ + +G E F+ED+ + +SV+ + +++ Sbjct: 160 LAAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLANDPA 218 Query: 229 ILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 I R P A+T AEY + KG +VL+I+ +T +A ++REI+ E+P RGYP ++ Sbjct: 219 IERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGYLY 278 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + L L ER G KG++T + + + D+ PI D I +G I+L R L + G Sbjct: 279 TNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKSGI 338 Query: 348 YPPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 339 QPPIDVLPSLSRLKDKG 355 >gi|268315651|ref|YP_003289370.1| ATP synthase F1, beta subunit [Rhodothermus marinus DSM 4252] gi|262333185|gb|ACY46982.1| ATP synthase F1, beta subunit [Rhodothermus marinus DSM 4252] Length = 501 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/325 (31%), Positives = 161/325 (49%), Gaps = 36/325 (11%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+ IDG + + I + PP + +TGI+VID+ P+ G Sbjct: 93 GRLFNVVGQAIDGLPQ-PQAEGYRPIHAPAPPFEELATRVEMLETGIKVIDLIQPVMRGG 151 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212 ++G+F G+G+GK+ L+ + +S+ VGER RE +RE +E + GD Sbjct: 152 KVGLFGGAGVGKTVLIMELINNIAKAHEGLSVFAGVGERTREGNDLLREMLESKVIRYGD 211 Query: 213 -------------------NLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGD 250 LKKS +V +E P R LT + IAEYF G Sbjct: 212 AFLESMKAGGWDLSKVDFEELKKSQATLVFGQMNEPPGARARVALTGLAIAEYFRDLGGR 271 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI + + G IT+ Sbjct: 272 DVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERI--TSTKHGAITSF 329 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 ++ V D+ DP + + LD VL+R LA +G YP VDPL S SR+ D +E Sbjct: 330 QAIYVPADDLTDPAPATTFAHLDATTVLSRQLAAQGIYPAVDPLESTSRILDPNIVGEEH 389 Query: 371 -KLVSSLTHLIHRFEETRDIRLIGG 394 ++ + ++ R++E +DI I G Sbjct: 390 YRVAQEVKQILQRYKELQDIIAILG 414 >gi|227501705|ref|ZP_03931754.1| F0F1 ATP synthase subunit beta [Corynebacterium accolens ATCC 49725] gi|306835882|ref|ZP_07468877.1| ATP synthase F1 sector beta subunit [Corynebacterium accolens ATCC 49726] gi|227077730|gb|EEI15693.1| F0F1 ATP synthase subunit beta [Corynebacterium accolens ATCC 49725] gi|304568247|gb|EFM43817.1| ATP synthase F1 sector beta subunit [Corynebacterium accolens ATCC 49726] Length = 481 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 165/299 (55%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D + LG+ D + + PPA ++ + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 281 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 338 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A +G YP V+PL S SR+ + ++ ++ + ++ + +E +DI I G Sbjct: 339 ELDRAIASKGIYPAVNPLTSTSRILEPGIVGEKHYEVAQRVIGILQKNKELQDIIAILG 397 >gi|2493102|sp|Q48333|VATB_HALVO RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|496905|emb|CAA56052.1| membrane ATPase [Haloferax volcanii] gi|1098058|prf||2115218E ATPase:SUBUNIT=beta Length = 468 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/274 (31%), Positives = 141/274 (51%), Gaps = 14/274 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+PIDG + D +I+ +R+ E+ +TG+ ID L G Sbjct: 84 LGRVLDGSGQPIDGGPEIVP-DERRDIVGAAINPYSREYPEEFIQTGVSAIDGMNTLVRG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYL 210 Q++ +F+ SG+ + L AR V+ +G E EF+ED+ Sbjct: 143 QKLPIFSASGLPHNDLALQIARQATVPEDEESGEESEFAVVFGAMGITQEEANEFMEDFE 202 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268 L++SVV +D+ + R + P A+T AEY + D +VL+IL +T + ++RE Sbjct: 203 RTGALERSVVFTNLADDPAVERTVTPRLALTTAEYLAFDKDYHVLVILTDMTNYCEALRE 262 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I E+P RGYP ++++L +L ER G + G++T + + + GD+ PI D Sbjct: 263 IGAAREEVPGRRGYPGYMYTDLAQLYERAGRIQGRDGSVTQIPILTMPGDDDTHPIPDLT 322 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 I +G I ++R L +G PP++PL S+SRL D Sbjct: 323 GYITEGQIYIDRDLNSQGIRPPINPLPSLSRLMD 356 >gi|195160213|ref|XP_002020970.1| GL25088 [Drosophila persimilis] gi|194118083|gb|EDW40126.1| GL25088 [Drosophila persimilis] Length = 661 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 111/345 (32%), Positives = 173/345 (50%), Gaps = 26/345 (7%) Query: 68 DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 +IV + E I G V G R++ GR++N +G PID +G++ Sbjct: 159 NIVRCVAMDATEGIKRGQKVVDTGYPIRVAVGKAVLGRILNVVGDPIDE-----RGEVKS 213 Query: 127 EIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178 E S + P + V+ TGI+VID+ P G +IG+F G+G+GK+ L+ Sbjct: 214 EYHSFIHTEAPVLTELSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELI 273 Query: 179 SMFARSDCFDKVIISLVGERGRE----VREFIEDY---LGDNLKKSVVVVATSDESPILR 231 + A++ V + GER RE E IE L ++ K V+V +E P R Sbjct: 274 NNIAKAHGGYSVFVG-AGERTREGNDLYHEMIESKVISLEEDTSKVVLVFGQMNEPPGAR 332 Query: 232 KMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 LT +TIAEYF G +VLL +D+I RF + E++ G +P A GY ++ +++ Sbjct: 333 SRVVLTGLTIAEYFRDIDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDM 392 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 + ERI + G+IT+V +V V D+ +DP + + LD VL+R +AE G YP Sbjct: 393 GTMQERI--TSTRNGSITSVQAVYVPADDLSDPAPAATFTHLDATTVLSRPIAELGIYPA 450 Query: 351 VDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VDPL S SR+ D +E V+ ++ + ++ +DI I G Sbjct: 451 VDPLDSSSRILDPDVVGEEHYNVARAVQKTLQGYKSLQDIIAILG 495 >gi|155029335|dbj|BAF75551.1| ATP synthase beta subunit [Cocconerion minus] Length = 489 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---DLGPVDTRATYPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|28628128|gb|AAO34612.1| HrcN [Erwinia chrysanthemi] Length = 459 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/187 (41%), Positives = 111/187 (59%), Gaps = 2/187 (1%) Query: 245 FSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 F + G VLLI+DS+TRFA + REI GE G P SV++ LPRL+ER G + + Sbjct: 263 FRAAGKQVLLIIDSLTRFARAQREIGLALGEPQGRGGLPPSVYTLLPRLVERAG--QTRQ 320 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G ITA+ SVL++ D+ NDP+AD VRS++DGHIVL+R LAE YP +D L S+SR Sbjct: 321 GAITALYSVLIEQDSMNDPVADEVRSLIDGHIVLSRRLAERNHYPAIDVLMSLSRTMSNV 380 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDL 424 + + +++ L+ +++ + +G Y+PG D D AV I FL+Q+ + Sbjct: 381 VEREHTRNANAVRRLMAAYKQVEMLIRLGEYQPGHDAFTDAAVSANDDINRFLQQAMREP 440 Query: 425 SSEDVFQ 431 S D Q Sbjct: 441 QSFDFIQ 447 >gi|33598626|ref|NP_886269.1| F0F1 ATP synthase subunit beta [Bordetella parapertussis 12822] gi|33603577|ref|NP_891137.1| F0F1 ATP synthase subunit beta [Bordetella bronchiseptica RB50] gi|81579009|sp|Q7W3B0|ATPB_BORPA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81836821|sp|Q7WEM9|ATPB_BORBR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|33574755|emb|CAE39414.1| ATP synthase beta chain [Bordetella parapertussis] gi|33577702|emb|CAE34967.1| ATP synthase beta chain [Bordetella bronchiseptica RB50] Length = 466 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + D I P + +TGI+VID+ P G Sbjct: 91 GRIMDVLGRPIDEAGPIAS-DEKRAIHQPAPRFDELSPSVELLETGIKVIDLVCPFAKGG 149 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 269 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E ++ + + R++E RDI I G Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYQVARGVQQTLQRYKELRDIIAILG 384 >gi|22002079|sp|Q60187|VATB_METMA RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B Length = 460 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 30/361 (8%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINA 108 + G + GQV+ + DIV + G G ++F ++ S GR+++ Sbjct: 32 IKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLDKDCGVIFTGETLKLPASVDLLGRILSG 91 Query: 109 LGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 G+P DG D L +M +++PP K F +TGI ID L G Sbjct: 92 SGEPRDGGPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 Q++ +F+ SG+ + + AR S+ V+ + +G E + F+ D+ L Sbjct: 144 QKLPIFSASGLPHNEIALQIARQASVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGAL 203 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273 +++VV + +D+ + R + P A+T AEY + G +VL+IL IT +A ++R++ Sbjct: 204 ERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAAR 263 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 E+P RGYP ++++L L ER G + KG++T + + + GD+ PI D I + Sbjct: 264 NEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITE 323 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDI 389 G IV+ R L +G YPP++ L S+SRL + A ++ K VS + + E RD+ Sbjct: 324 GQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSD--QMYAGYAEGRDL 381 Query: 390 R 390 R Sbjct: 382 R 382 >gi|271963209|ref|YP_003337405.1| H(+)-transporting two-sector ATPase [Streptosporangium roseum DSM 43021] gi|270506384|gb|ACZ84662.1| H(+)-transporting two-sector ATPase [Streptosporangium roseum DSM 43021] Length = 475 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/254 (35%), Positives = 140/254 (55%), Gaps = 8/254 (3%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGREVR 203 TGI+VID+ TP G +IG+F G+G+GK+ L+ R + + VGER RE Sbjct: 141 TGIKVIDLLTPYVKGGKIGLFGGAGVGKTVLIQEMIRRVALKFSGTSVFAGVGERTREGN 200 Query: 204 E-FIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261 + ++E LK + +V DE P R L+A+T+AEYF + +VLL +D+I R Sbjct: 201 DLWLEMDEAGVLKDTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFR 260 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++T G +P A GY ++ E+ L ERI + +IT++ ++ V D+ Sbjct: 261 FTQAGSEVSTLLGRMPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDIT 318 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLI 380 DP + + LD VL+R ++E+G YP VDPL S SR+ D +E V+ T ++ Sbjct: 319 DPAPHNAFAHLDAQTVLSRPISEKGIYPAVDPLDSTSRILDPLILGEEHYRVAQETKRIL 378 Query: 381 HRFEETRDIRLIGG 394 +++E +DI I G Sbjct: 379 QKYKELQDIIAILG 392 >gi|15893158|ref|NP_360872.1| F0F1 ATP synthase subunit beta [Rickettsia conorii str. Malish 7] gi|15620369|gb|AAL03773.1| ATP synthase beta chain [Rickettsia conorii str. Malish 7] Length = 499 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 158/316 (50%), Gaps = 19/316 (6%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVI 152 RI GR++N +G+PIDG + ++S + K P Q E TGI+VI Sbjct: 106 RIPVGTETLGRIMNVVGEPIDGKGDIKSSNISS--IYKPAPDFTHQSTECNILVTGIKVI 163 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + + Sbjct: 164 DLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEM 223 Query: 210 LGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSI 259 + + K +V +E P R L+ +TIAE F ++G +VL +D+I Sbjct: 224 IDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNI 283 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ Sbjct: 284 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVPADD 341 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ + Sbjct: 342 LTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQ 401 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 402 VLQTYKSLQDIITILG 417 >gi|292654497|ref|YP_003534394.1| A-type ATP synthase subunit B [Haloferax volcanii DS2] gi|291371653|gb|ADE03880.1| A-type ATP synthase subunit B [Haloferax volcanii DS2] Length = 468 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/274 (31%), Positives = 141/274 (51%), Gaps = 14/274 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+PIDG + D +I+ +R+ E+ +TG+ ID L G Sbjct: 84 LGRVLDGSGQPIDGGPEIVP-DERRDIVGAAINPYSREYPEEFIQTGVSAIDGMNTLVRG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-----------KVIISLVGERGREVREFIEDYL 210 Q++ +F+ SG+ + L AR V+ +G E EF+ED+ Sbjct: 143 QKLPIFSASGLPHNDLALQIARQATVPEDEESGEESEFAVVFGAMGITQEEANEFMEDFE 202 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268 L++SVV +D+ + R + P A+T AEY + D +VL+IL +T + ++RE Sbjct: 203 RTGALERSVVFTNLADDPAVERTVTPRLALTTAEYLAFDKDYHVLVILTDMTNYCEALRE 262 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I E+P RGYP ++++L +L ER G + G++T + + + GD+ PI D Sbjct: 263 IGAAREEVPGRRGYPGYMYTDLAQLYERAGRIQGRDGSVTQIPILTMPGDDDTHPIPDLT 322 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 I +G I ++R L +G PP++PL S+SRL D Sbjct: 323 GYITEGQIYIDRDLNSQGIRPPINPLPSLSRLMD 356 >gi|212550491|ref|YP_002308808.1| F0F1 ATP synthase subunit beta [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|226739975|sp|B6YQC5|ATPB_AZOPC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|212548729|dbj|BAG83397.1| F-type ATP synthase beta subunit [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 500 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 109/337 (32%), Positives = 165/337 (48%), Gaps = 57/337 (16%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMN--RQRVEKGFKTGIRVIDIFTP 157 GR++N +G+ IDG L S E + PP VE F TGI+VID+ P Sbjct: 91 GRLLNVIGETIDGMKCL-----SYENTKSIHCDPPKFKDLSTSVEVLF-TGIKVIDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE- 207 G +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 145 YLKGGKIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIES 202 Query: 208 -----------------------DYLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIA 242 DY + LKKS +V +E P R L+ +TIA Sbjct: 203 GVIRYGKEFEEGMRLGEWDLSKIDY--EELKKSQATLVFGQMNEPPGARSSVVLSGLTIA 260 Query: 243 EYF----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 E F S G +VL +D+I RF + E++ G +P A GY ++ +E+ ++ ERI Sbjct: 261 EAFRDQSGSDGHDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGKMQERI- 319 Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358 + + G+IT++ +V V D+ DP + + LD VL+R + E G YP VDPL SVS Sbjct: 320 -TSTKNGSITSIQAVYVPADDLTDPAPATTFTFLDATTVLDRKIFELGIYPAVDPLNSVS 378 Query: 359 RLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 R+ D + + L+ R++E +DI I G Sbjct: 379 RILDPNVLGQEHYDTAQKVKQLLQRYKELQDIIAILG 415 >gi|42559020|gb|AAS20196.1| ATP synthase beta subunit [Ecdeiocolea monostachya] Length = 477 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D SLG D S I P + F+TGI+V+D+ Sbjct: 84 GATLGRIFNVLGEPVD---SLGPVDTSATFPIHRSAPAFIELDTKLAIFETGIKVVDLLA 140 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 199 Query: 213 ------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 200 GVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 259 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 317 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + S+ + R Sbjct: 318 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQSVKQTLQR 377 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 378 YKELQDIIAILG 389 >gi|170076614|ref|YP_001733253.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7002] gi|169887476|gb|ACB01184.1| ATP synthase F1, beta subunit [Synechococcus sp. PCC 7002] Length = 465 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 149/296 (50%), Gaps = 9/296 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N G+ ID L I P + + + +TGI+VID+ P+ Sbjct: 91 ALLGRMFNVFGEAIDQGKPL-TAVKHRSIHQAAIPLVQQSTQAEILETGIKVIDVLAPIE 149 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LK 215 G + G+F G+G+GK+ L++ + ISL +GER RE E + L Sbjct: 150 RGGKAGLFGGAGVGKTVLITEMIHNMVSQHQGISLFCGIGERNREAEELYREMQATGVLD 209 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSG 274 ++V++ +E P R A+TIAEYF + +VLL++D+I RF + +E++ G Sbjct: 210 QTVLLFGQMNEPPGARFRVGHAALTIAEYFRDEARQDVLLLIDNIFRFIQAGQEVSGLMG 269 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ELP GY ++ +EL L ERI + + G IT+V +V V D+ DP A L Sbjct: 270 ELPSRVGYQPTLATELAALEERI--TSTKNGAITSVQAVYVPADDFTDPAAVHTFGHLSA 327 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 IVL+R A EG YP VDPL S S++ A + ++ ++ + +EE +D+ Sbjct: 328 SIVLSRKRASEGFYPAVDPLRSSSKMLMPAIAGRRHYEIALAVRQTLATYEELKDM 383 >gi|159042990|ref|YP_001531784.1| F0F1 ATP synthase subunit beta [Dinoroseobacter shibae DFL 12] gi|190358209|sp|A8LN39|ATPB1_DINSH RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|157910750|gb|ABV92183.1| ATP synthase F1, beta subunit [Dinoroseobacter shibae DFL 12] Length = 462 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 93/295 (31%), Positives = 157/295 (53%), Gaps = 13/295 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG--FKTGIRVIDIFTPLCH 160 GR+++ G P+DG + + + PP ++ RV + +TGI+ ID+ +P+ Sbjct: 88 GRMLDMFGAPLDGAPP--PEATARRPIHRPPPVLS-DRVLRAEVLETGIKAIDLLSPIER 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKKS 217 G + G+F G+G+GK+ LLS + +SL +GER RE E + +++ Sbjct: 145 GGKTGLFGGAGVGKTVLLSELIHNTVEHHHGVSLFCGIGERSREAEELWREMGEAGVRER 204 Query: 218 VVVV-ATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 +V++ +E+P +R + +A+T+AEYF + +VLL++D+I RF + E++ G Sbjct: 205 MVMLFGQMNEAPGVRFLVGHSALTMAEYFRDDREQDVLLLIDNIFRFVQAGSEVSGLLGR 264 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P GY ++ +EL L ERI + +G IT++ +V V D+ DP A + S L Sbjct: 265 MPSRVGYQPTLATELAALQERI--ASTRRGAITSIQAVYVPADDFTDPAAAHIFSHLSAS 322 Query: 336 IVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEETRDI 389 +VL+R A EG YP VDPLAS S L + + + + +E+ RDI Sbjct: 323 VVLSRKRASEGLYPAVDPLASTSVMLTPEVVGQRHYDIARGVRRTLAEYEDLRDI 377 >gi|461568|sp|Q05373|ATPB_SYNP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|480499|pir||S36972 H+-transporting two-sector ATPase (EC 3.6.3.14) beta chain - Synechococcus sp. (PCC 6716) gi|49227|emb|CAA49882.1| ATP synthase (beta) [Synechococcus sp.] Length = 482 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 156/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + ++ I P + F+TGI+VID+ TP Sbjct: 95 ATLGRIFNVLGEPVDEKGEVNISE-TLPIHRPAPSFTELETKPSVFETGIKVIDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLGD 212 G +IG+F G+G+GK+ ++ + +S+ VGER RE E IE + D Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATQHGGVSVFAGVGERTREGNDLYNEMIESGVID 213 Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 + K +V +E P R L+ +T+AEYF +VLL +D+I RF + Sbjct: 214 KDDPSKSKIALVYGQMNEPPGARMRVGLSGLTMAEYFRDVNKQDVLLFVDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTMEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + E + ++ + R++E Sbjct: 332 TFAHLDGTTVLSRGLAAKGIYPAVDPLGSTSNMLQPDIVGSEHYQTARAVQATLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|307343720|emb|CBJ19277.1| atpD synthase beta subunit [Micromonospora sp. CR38] Length = 298 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|307343686|emb|CBJ19260.1| atpD synthase beta subunit [Micromonospora sp. GUI16] Length = 298 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|207744812|ref|YP_002261204.1| atp synthase beta chain protein [Ralstonia solanacearum IPO1609] gi|206596222|emb|CAQ63149.1| atp synthase beta chain protein [Ralstonia solanacearum IPO1609] Length = 439 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 153/302 (50%), Gaps = 18/302 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+++ LG+PID G ++ E I K P +TGI+VID+ P Sbjct: 94 GRIMDVLGRPIDE-----AGPIACEEKRGIHQKAPKFDELSPSVDLLETGIKVIDLVCPF 148 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN- 213 G ++G+F G+G+GK+ L++ A+ V VGER RE +F + N Sbjct: 149 AKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKDSNV 207 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 L K +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ Sbjct: 208 LDKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAGTEVSALL 267 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ +L ERI + + G+IT++ +V V D+ DP + LD Sbjct: 268 GRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLD 325 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLI 392 +VL+R +A G YP VDPL S SR D E ++ + + R++E RDI I Sbjct: 326 STVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVADRVKKTLQRYKELRDIIAI 385 Query: 393 GG 394 G Sbjct: 386 LG 387 >gi|183206598|gb|ACC54497.1| ATP synthase beta subunit [Merciera tenuifolia] Length = 488 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 209 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIITILG 399 >gi|307343730|emb|CBJ19282.1| atpD synthase beta subunit [Micromonospora sp. SG15] Length = 308 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 7 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 66 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 67 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 126 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ +L ERI + IT++ ++ V D+ Sbjct: 127 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGQLQERITSVRGQA--ITSMQAIYVPADD 184 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E ++ + + Sbjct: 185 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFQVATEVKR 244 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 245 ILQRYKDLQDIIAILG 260 >gi|307343728|emb|CBJ19281.1| atpD synthase beta subunit [Micromonospora sp. SG10] Length = 302 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|20467409|gb|AAL27835.1| ATPase beta subunit [Araucaria araucana] Length = 452 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 107/365 (29%), Positives = 178/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K+ + GQ+I++ ++ V + + + G VF G + A GR Sbjct: 21 KDKNTAGQLIQVTCEVQQLLGNNKVRAIAMSATDGLMRGMKVFDTGAPLSVPVGAATLGR 80 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D LG + + + + PA + + F+TGI+V+D+ P G Sbjct: 81 IFNVLGEPVD---DLGPVNARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLAPYRRGG 137 Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ L+ + V + S VGER RE + + + Sbjct: 138 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVIQEQN 197 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 198 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 257 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 258 ALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 315 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + + +E + + + R++E +DI Sbjct: 316 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQDI 375 Query: 390 RLIGG 394 I G Sbjct: 376 IAILG 380 >gi|4519348|dbj|BAA75589.1| ATP synthase beta-subunit [Vitreochlamys ordinata] Length = 376 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D ++ + ++ I P + F+TGI+V+D+ P G Sbjct: 31 LGRIFNVLGEPVDNMGNVLVEE-TLPIHRTAPAFADLDTRLSIFETGIKVVDLLAPYRRG 89 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IED 208 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 90 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEK 149 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 150 NLSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W EK S S+ + R++E Sbjct: 266 TFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWILGEKHYDSAQSVKKTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|70997705|ref|XP_753589.1| ATP synthase F1, beta subunit [Aspergillus fumigatus Af293] gi|66851225|gb|EAL91551.1| ATP synthase F1, beta subunit, putative [Aspergillus fumigatus Af293] gi|159126680|gb|EDP51796.1| ATP synthase F1, beta subunit, putative [Aspergillus fumigatus A1163] Length = 519 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K I ++ P + + TGI+V+D+ P G Sbjct: 130 LGRIVNVTGDPIDERGPI-KATKFAPIHAEAPEFTEQSTSAEILVTGIKVVDLLAPYARG 188 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L++ A++ V VGER RE + + + Sbjct: 189 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 247 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 248 EGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 307 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + Sbjct: 308 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTKKGSITSVQAVYVPADDLTDPAPATTFA 365 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D +E V++ + ++ ++ +DI Sbjct: 366 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYAVATRVQQMLQEYKSLQDI 425 Query: 390 RLIGG 394 I G Sbjct: 426 IAILG 430 >gi|257852946|gb|ACV71484.1| ATP synthase beta subunit [Cratoxylum formosum] Length = 488 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 156/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+PID D L + I P + F+TGI+V+D+ P Sbjct: 96 GATLGRIFNVLGEPID-DLGLVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L+ + +S+ VGER RE + ++ Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGVI 214 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 215 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 274 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S L K + + + + R++E Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGEEHYETAQRVKQTLQRYKE 392 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 393 LQDIIAILG 401 >gi|257387337|ref|YP_003177110.1| V-type ATP synthase subunit B [Halomicrobium mukohataei DSM 12286] gi|257169644|gb|ACV47403.1| H+transporting two-sector ATPase alpha/beta subunit central region [Halomicrobium mukohataei DSM 12286] Length = 471 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G PIDG + + D +I+ K +R+ E+ +TG+ ID L G Sbjct: 85 LGRVLSGSGDPIDGGPEI-EPDERRDIVGKAINPYSREYPEEFIQTGVSGIDGMNTLVRG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGREVREFIED 208 Q++ +F+ SG+ + L AR VI +G E EF++D Sbjct: 144 QKLPIFSASGLPHNDLALQIARQASVPEEEEGDDDEGSEFAVIFGAMGITQEEANEFMDD 203 Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266 + L++SVV + +D+ + R + P A+T AEY + KG +VL+IL +T + ++ Sbjct: 204 FERTGALERSVVFMNLADDPAVERTLTPRLALTTAEYLAFDKGYHVLVILTDMTNYCEAL 263 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REI E+P RGYP ++++L +L ER G E +G++T + + + GD+ PI D Sbjct: 264 REIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQIPILTMPGDDDTHPIPD 323 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 I +G I ++R L +G PP++ L S+SRL D Sbjct: 324 LTGYITEGQIYIDRDLNSQGIEPPINVLPSLSRLMD 359 >gi|120437867|ref|YP_863553.1| F0F1 ATP synthase subunit beta [Gramella forsetii KT0803] gi|166201708|sp|A0M791|ATPB_GRAFK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|117580017|emb|CAL68486.1| ATP synthase subunit beta [Gramella forsetii KT0803] Length = 503 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG +L K G+ + I + P + + TGI+VID+ P G Sbjct: 91 GRLFNVIGDAIDGLGNLPKAGEDGLPIHRQAPKFEDLSVSTEVLFTGIKVIDLIEPYSKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 211 DDFMHSMEEGGWDLQKVDKEVMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 270 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + + G Sbjct: 271 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKNG 328 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 388 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + L+ R++E +DI I G Sbjct: 389 LGDEHYDCAQRVKELLQRYKELQDIIAILG 418 >gi|114421|sp|P17614|ATPBM_NICPL RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|19685|emb|CAA26620.1| ATP synthase beta subunit [Nicotiana plumbaginifolia] Length = 560 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+ ID + D + I + P + + ++ TGI+V+D+ P Sbjct: 168 ATLGRIINVIGEAIDERGPITT-DHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQ 226 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE RE IE Sbjct: 227 RGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTREGNDLYREMIESGVI 285 Query: 209 YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LG+ +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF + Sbjct: 286 KLGEKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 345 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 346 NSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAP 403 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SR L+ D + ++ ++ Sbjct: 404 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYK 463 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 464 NLQDIIAILG 473 >gi|183206652|gb|ACC54524.1| ATP synthase beta subunit [Campanula persicifolia] Length = 471 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPID---NLGPVDTRTTWPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 201 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 202 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 261 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 319 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 379 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 380 YKELQDIITILG 391 >gi|113910950|gb|ABI48207.1| ATPase beta subunit [Phyllocladus aspleniifolius] Length = 456 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D S I P + F+TGI+V+D+ Sbjct: 66 GATLGRIFNVLGEPVD---DLGPVDASARSPIHRPAPAFIQLDTKFSIFETGIKVVDLLA 122 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + V + S VGER RE + + Sbjct: 123 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 182 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 183 VIREQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 242 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 300 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + +E + + + R+ Sbjct: 301 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 360 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 361 KELQDIIAILG 371 >gi|291298840|ref|YP_003510118.1| ATP synthase F1 subunit beta [Stackebrandtia nassauensis DSM 44728] gi|290568060|gb|ADD41025.1| ATP synthase F1, beta subunit [Stackebrandtia nassauensis DSM 44728] Length = 477 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 89/273 (32%), Positives = 146/273 (53%), Gaps = 8/273 (2%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--S 184 I K PP + + +TGI+V+D+ P G +IG+F G+G+GK+ L+ M R Sbjct: 121 IHRKPPPFAALEPKTEMLETGIKVLDLLAPYVKGGKIGLFGGAGVGKTVLIQEMVIRVAQ 180 Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE + I + L+++ +V DE P R L+A+T+AE Sbjct: 181 NFGGSSVFAGVGERTREGNDMIAEMKESGVLEQTALVYGQMDEPPGTRLRVALSALTMAE 240 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF K VLL +D+I RF + E++T G +P A GY ++ E+ L ERI + Sbjct: 241 YFRDVKNQEVLLFVDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERI--TSL 298 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 IT++ ++ V D++ DP + + LD L R ++++G YP VDPLAS SR+ + Sbjct: 299 RGKAITSMQAIYVPADDYTDPAPHTAFTHLDATTNLERKVSDKGIYPAVDPLASSSRILE 358 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE ++ + + ++ ++ E +DI I G Sbjct: 359 PEVVGDEHYRVAAEVKRILQKYNELQDIIAILG 391 >gi|260429053|ref|ZP_05783030.1| ATP synthase F1, beta subunit [Citreicella sp. SE45] gi|260419676|gb|EEX12929.1| ATP synthase F1, beta subunit [Citreicella sp. SE45] Length = 474 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + D I P + + TGI+VID+ P Sbjct: 84 ATLGRILNVVGEPVDEQGPV-EADEYRAIHQPAPEFDEQATDTEILVTGIKVIDLLAPYS 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESNV 200 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 DNL +S V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 201 IKPDNLSESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VLNR+++E G YP VDPL S SR+ D +E V+ + ++ R++ Sbjct: 319 ATTFAHLDATTVLNRAISELGIYPAVDPLDSNSRILDPQIVGEEHYNVARDVQGILQRYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|198443079|pdb|2RKW|A Chain A, Intermediate Position Of Atp On Its Trail To The Binding Pocket Inside The Subunit B Mutant R416w Of The Energy Converter A1ao Atp Synthase gi|198443080|pdb|2RKW|B Chain B, Intermediate Position Of Atp On Its Trail To The Binding Pocket Inside The Subunit B Mutant R416w Of The Energy Converter A1ao Atp Synthase gi|198443186|pdb|3B2Q|A Chain A, Intermediate Position Of Atp On Its Trail To The Binding Pocket Inside The Subunit B Mutant R416w Of The Energy Converter A1ao Atp Synthase gi|198443187|pdb|3B2Q|B Chain B, Intermediate Position Of Atp On Its Trail To The Binding Pocket Inside The Subunit B Mutant R416w Of The Energy Converter A1ao Atp Synthase gi|223365864|pdb|3EIU|A Chain A, A Second Transient Position Of Atp On Its Trail To The Nucleotide-Binding Site Of Subunit B Of The Motor Protein A1ao Atp Synthase gi|223365865|pdb|3EIU|B Chain B, A Second Transient Position Of Atp On Its Trail To The Nucleotide-Binding Site Of Subunit B Of The Motor Protein A1ao Atp Synthase Length = 469 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 30/361 (8%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINA 108 + G + GQV+ + DIV + G G ++F ++ S GR+++ Sbjct: 41 IKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLDKDCGVIFTGETLKLPASVDLLGRILSG 100 Query: 109 LGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 G+P DG D L +M +++PP K F +TGI ID L G Sbjct: 101 SGEPRDGGPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRG 152 Query: 162 QRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 Q++ +F+ SG+ + + AR S+ V+ + +G E + F+ D+ L Sbjct: 153 QKLPIFSASGLPHNEIALQIARQASVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGAL 212 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273 +++VV + +D+ + R + P A+T AEY + G +VL+IL IT +A ++R++ Sbjct: 213 ERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAAR 272 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 E+P RGYP ++++L L ER G + KG++T + + + GD+ PI D I + Sbjct: 273 NEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITE 332 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDI 389 G IV+ R L +G YPP++ L S+SRL + A ++ K VS + + E RD+ Sbjct: 333 GQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSD--QMYAGYAEGRDL 390 Query: 390 R 390 R Sbjct: 391 R 391 >gi|113910800|gb|ABI48132.1| ATPase beta subunit [Plagiochila porelloides] Length = 456 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 163/312 (52%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 182 Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + D N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 183 VIDEQNISZSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 242 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 243 AGSEVSALPGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 300 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 301 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 359 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 360 YKELQDIIAISG 371 >gi|307343702|emb|CBJ19268.1| atpD synthase beta subunit [Micromonospora sp. GUI41] gi|307343750|emb|CBJ19292.1| atpD synthase beta subunit [Micromonospora sp. SR2] Length = 302 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|297559316|ref|YP_003678290.1| ATP synthase F1 subunit beta [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296843764|gb|ADH65784.1| ATP synthase F1, beta subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 480 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/292 (32%), Positives = 156/292 (53%), Gaps = 8/292 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V N LG+ +D + I K P + + TGI+VID+ TP G Sbjct: 102 GHVFNTLGESLDVPTAELGVTERWPIHRKAPAFDQLESKTEMMVTGIKVIDLLTPYVRGG 161 Query: 163 RIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + F V + + VGER RE + F+E + L+ + Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIARNFGGVSVFAGVGERTREGTDLFLEMDEMEVLQDTA 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 222 LVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ +L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 282 SAVGYQPNLADEMGQLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATTE 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRD 388 L+R ++++G YP VDPL S SR+ D + +E V+ + ++ R + +D Sbjct: 340 LSRPISQKGIYPAVDPLTSTSRILDPQYVGEEHYQVAQRVKEILQRNNDLQD 391 >gi|260655794|ref|ZP_05861263.1| V-type sodium ATPase, B subunit [Jonquetella anthropi E3_33 E1] gi|260629410|gb|EEX47604.1| V-type sodium ATPase, B subunit [Jonquetella anthropi E3_33 E1] Length = 471 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/330 (31%), Positives = 166/330 (50%), Gaps = 29/330 (8%) Query: 86 LVFHWGRFRISP-SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNR 138 +V GR P SA GR+ N G+P+DG + S+ L M S+ P+ Sbjct: 71 VVRFLGRVLTLPVSADMLGRIFNGRGQPLDGGAPIIPEKSIDVNGLPMNPYSRDYPS--- 127 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVII 192 + +TGI ID P+ GQ++ +F+ SG+ + + + AR + V+ Sbjct: 128 ----EFIQTGISTIDGMNPMVRGQKLPIFSASGLPHNRMAAQLARQANVLGAKGNFAVVF 183 Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGD 250 + +G E F+ED+ L+++V+ V +D+ I R P A+T AEY + K Sbjct: 184 AAMGITFEESSFFMEDFRKTGALERTVMFVNLADDPAIERITTPRLALTAAEYLAFEKNM 243 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VL+IL +T + ++REI+ E+P RGYP ++++L L ER G G+IT V Sbjct: 244 HVLVILTDLTNYCEALREISAARKEVPGRRGYPGYLYTDLANLYERAGKLRGSTGSITQV 303 Query: 311 -ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-- 367 I + +GD + PI D I +G I+L+++L G YPPVD + S+SRL DK Sbjct: 304 PILTMPEGDKTH-PIPDLTGYITEGQIILSQTLHRRGIYPPVDVMPSLSRLKDKGIGKGK 362 Query: 368 ---DEKKLVSSLTHLIHRFEETRDIRLIGG 394 D L++ L R +E +++ +I G Sbjct: 363 TREDHADLMNQLFAAYARGKEAKELAVILG 392 >gi|255022659|ref|ZP_05294645.1| F0F1 ATP synthase subunit beta [Listeria monocytogenes FSL J1-208] Length = 456 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 119/404 (29%), Positives = 195/404 (48%), Gaps = 30/404 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN + + IGE L G V + G + G Sbjct: 33 EYETHQGTYLAEVVQHTGINT----VSAIAIGEVSGLARGAEVVNLGHPIEVPVGETVQG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG + + I + P ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGLPE-PEAKVKWPIFREQPLLRELDTNKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGRE-VREFIEDYLGDNLK 215 G+F G+G+GKS L+ SM + F V GER RE + + E L Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMMGGNSVFTGV-----GERVREGIGLYKELESSGVLP 202 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSG 274 ++ VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G Sbjct: 203 QTTVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQG 262 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 ++P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD Sbjct: 263 KIPITGGYQSTLSKEVGDFQDRIASTKN--GSITSIQCVFLPADDIDDPSAVATFSHLDS 320 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 IVL RS+A G +P V+PL S SR + + + +L + ++ R+ E ++I + Sbjct: 321 TIVLERSIAALGIFPAVNPLQSFSRALNPTFVGERHYQLAVQVKFILQRYMELQEIINVL 380 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQ----SPSDLSSEDVFQEI 433 G D K V++ I +FL Q S +E +F EI Sbjct: 381 GMAELSDED-KKLVYRARKIRNFLSQPFYVSEKFTGTEGIFVEI 423 >gi|157689164|gb|ABV65138.1| ATP synthase CF1 beta subunit [Plumbago auriculata] Length = 498 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I PP + F+TGI+V+D+ P Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHKSAPPFIQLDTKLSIFETGIKVVDLLAPY 162 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 223 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 282 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAPA 340 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + DE + + + R++E Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|33318669|gb|AAQ05218.1| ATP synthase beta subunit [Podocarpus chinensis] Length = 479 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D LG D S P PA + + F+TGI+V+D+ Sbjct: 89 GTTLGRIFNVLGEPVD---DLGPVDASTRSPIHRPAPAFTQLDTKFSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + V + S VGER RE + + Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 205 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 206 VIREQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + +E + + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|183206646|gb|ACC54521.1| ATP synthase beta subunit [Campanula peregrina] Length = 473 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 201 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 202 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 261 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 319 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 379 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 380 YKELQDIITILG 391 >gi|119367996|dbj|BAF40481.1| ATP synthase beta subunit [Cratoxylum cochinchinense] Length = 489 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 156/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+PID D L + I P + F+TGI+V+D+ P Sbjct: 96 GATLGRIFNVLGEPID-DLGLVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L+ + +S+ VGER RE + ++ Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGVI 214 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 215 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 274 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S L K + + + + R++E Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGEEHYETAQRVKQTLQRYKE 392 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 393 LQDIIAILG 401 >gi|61968281|gb|AAX57067.1| ATP synthase beta subunit [Petalodiscus fadenii] Length = 479 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 92 GATLGRIFNVLGEPVD---DLGPVDTRTTAPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGIGERTREGNDLYMEMKESG 208 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|183206670|gb|ACC54533.1| ATP synthase beta subunit [Heterochaenia ensifolia] Length = 483 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 99 GATLGRIFNVLGEPID---NLGPVDTPTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 214 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 215 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 274 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 275 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 332 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 333 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 392 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 393 YKELQDIITILG 404 >gi|7708550|emb|CAB89972.1| ATP synthase beta subunit [Plumbago zeylanica] Length = 491 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I PP + F+TGI+V+D+ P Sbjct: 97 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHKSAPPFIQLDTKLSIFETGIKVVDLLAPY 155 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 215 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 216 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 275 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAPA 333 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + DE + + + R++E Sbjct: 334 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQRYKE 393 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 394 LQDIIAILG 402 >gi|332796856|ref|YP_004458356.1| ATP synthase subunit B [Acidianus hospitalis W1] gi|332694591|gb|AEE94058.1| ATP synthase, B subunit [Acidianus hospitalis W1] Length = 466 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 160/309 (51%), Gaps = 18/309 (5%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV N LG+P+D + G+ S + PA+ R E+ +TGI ID L Sbjct: 90 MLGRVFNPLGEPLDNGPPVISGEKRDINGSAINPAV-RDYPEEFIQTGISAIDGLNSLLR 148 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIEDYLG 211 GQ++ +F+GSG+ + L + A+ V+ + +G R + R+F E+ Sbjct: 149 GQKLPIFSGSGLPANILAAQIAKQATVRGEESNFAVVFAAIGIRYDDALFFRKFFEETGA 208 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 N + + + ++E P+++ + P TA+T+AEY + + D +VL IL +T + S+REI+ Sbjct: 209 IN--RVAMFMTLANEPPVVKILTPRTALTLAEYLAFEKDMHVLAILIDMTNYCESLREIS 266 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P GYP ++++L + ER G + +KG+IT + + + D+ PI D Sbjct: 267 AAKEEVPGRGGYPGYMYTDLATIYERAGRVKGKKGSITQMPILTMPNDDMTHPIPDLTGY 326 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEE 385 I +G IVL+RSL +G YPP++ L S+SRL + D K L + L + + Sbjct: 327 ITEGQIVLDRSLYNKGIYPPINVLMSLSRLMKDGIGEGKTREDHKDLANQLFAAYAKAVD 386 Query: 386 TRDIRLIGG 394 TR + I G Sbjct: 387 TRGLAAIIG 395 >gi|21684883|emb|CAD11568.1| ATP synthase beta subunit [Ecdeiocolea monostachya] Length = 484 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D SLG D S I P + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGEPVD---SLGPVDTSATFPIHRSAPAFIELDTKLAIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 213 Query: 213 ------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 214 GVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 273 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 331 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + S+ + R Sbjct: 332 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQSVKQTLQR 391 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 392 YKELQDIIAILG 403 >gi|183206642|gb|ACC54519.1| ATP synthase beta subunit [Campanula lactiflora] Length = 466 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 198 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 376 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 377 YKELQDIITILG 388 >gi|146298581|ref|YP_001193172.1| F0F1 ATP synthase subunit beta [Flavobacterium johnsoniae UW101] gi|189081333|sp|A5FLS1|ATPB_FLAJ1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|146152999|gb|ABQ03853.1| ATP synthase F1, beta subunit [Flavobacterium johnsoniae UW101] Length = 503 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 102/330 (30%), Positives = 159/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG +L K G+ + I + P + + TGI+VID+ P G Sbjct: 91 GRLFNVVGDAIDGLGNLPKTGENGLPIHRQAPKFEDLSTSSEVLFTGIKVIDLIEPYAKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210 Query: 208 -----------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D G K+ V +E P R L+ ++IAEYF Sbjct: 211 DDFMHSMENGGWDLSKVDMPGMRESKATFVFGQMNEPPGARARVALSGLSIAEYFRDGAG 270 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 S +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + KG Sbjct: 271 SDQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTNKG 328 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPHI 388 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + ++ ++++ +DI I G Sbjct: 389 LGDEHYNCAQRVKEILQKYKQLQDIIAILG 418 >gi|22651732|gb|AAM26938.1| ATP synthase beta subunit [Dionaea muscipula] Length = 483 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 + GR+ N LG+PID +LG D + I P + + F+TGI+V+D+ Sbjct: 95 SATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI------- 206 P G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESG 211 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E +G++ K +V +E P R LTA+T+AE+F +VLL +D+I RF Sbjct: 212 VINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVLLFIDNIFRF 269 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 270 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 327 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VL+R LA +G YP VDPL S S + D+ + + + Sbjct: 328 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGDKHYETAQRVKQTLQ 387 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 388 RYKEVQDIIAILG 400 >gi|183206634|gb|ACC54515.1| ATP synthase beta subunit [Nesocodon mauritianus] Length = 467 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 198 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 376 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 377 YKELQDIITILG 388 >gi|139522706|gb|ABO77767.1| ATP synthase beta subunit [Burmeistera crassifolia] Length = 498 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|34536481|dbj|BAC87674.1| beta subunit of ATP synthase [Hafniomonas laevis] Length = 376 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + S+ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVDNMGPV-SAENSLPIHRTSPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 147 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF + +VLL +D++ R + Sbjct: 148 EKNLAESKVALVYGQMNEPPGARMRVALTALTMAEYFRDQNKQDVLLFIDNVFRLVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ + ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGAVQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 V + LD VL+R+LA +G YP VDPL S S + + W +K S+ + R++E Sbjct: 266 VFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDKHYDCAQSVKRTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|323493009|ref|ZP_08098145.1| F0F1 ATP synthase subunit beta [Vibrio brasiliensis LMG 20546] gi|323312745|gb|EGA65873.1| F0F1 ATP synthase subunit beta [Vibrio brasiliensis LMG 20546] Length = 467 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 155/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G + + I + P + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDECGEIG-AEETYSIHREAPSYEEQSNETALLETGVKVIDLVCPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLKK 216 +IG+F G+G+GK+ + + +S+ VGER RE +F +++ N++K Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVEK 204 Query: 217 S-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E + + R++E +DI Sbjct: 323 LDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDTARGVQQTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|225022778|ref|ZP_03711970.1| hypothetical protein CORMATOL_02823 [Corynebacterium matruchotii ATCC 33806] gi|305681777|ref|ZP_07404581.1| ATP synthase F1, beta subunit [Corynebacterium matruchotii ATCC 14266] gi|224944461|gb|EEG25670.1| hypothetical protein CORMATOL_02823 [Corynebacterium matruchotii ATCC 33806] gi|305658250|gb|EFM47753.1| ATP synthase F1, beta subunit [Corynebacterium matruchotii ATCC 14266] Length = 481 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + LG+ I PP + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-EPGLGRDGEQWGIHRDPPPFDQLEGKTEILETGIKVIDLLTPYVKGG 161 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 162 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDTA 221 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 222 LVFGQMDEPPGVRMRIALSGLTMAEYFRDVQHQDVLLFIDNIFRFTQAGSEVSTLLGRMP 281 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + +IT++ +V V D++ DP + + LD Sbjct: 282 SAVGYQPTLADEMGVLQERITSTRGK--SITSLQAVYVPADDYTDPAPATTFAHLDATTE 339 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP V+PL S SR+ + + ++ + +++ + +E +DI I G Sbjct: 340 LDRGIASKGIYPAVNPLTSTSRILEPGIVGERHYEVAQRVINILQKNKELQDIIAILG 397 >gi|183206518|gb|ACC54457.1| ATP synthase beta subunit [Physoplexis comosa] Length = 472 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 110/366 (30%), Positives = 174/366 (47%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + J G V G + GR Sbjct: 29 KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGJMRGMEVIDTGTPLSVPVGGATLGR 88 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 89 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 145 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 146 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 204 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 205 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 265 SAVLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE K S+ + R++E +D Sbjct: 323 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRYKELQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IITILG 388 >gi|156530135|gb|ABU75164.1| AtpB [Hannoa klaineana] gi|156530147|gb|ABU75170.1| AtpB [Odyendyea gabonensis] Length = 498 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|2605819|gb|AAC38049.1| ATP synthase beta subunit [Methanosarcina barkeri] Length = 469 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/263 (34%), Positives = 139/263 (52%), Gaps = 8/263 (3%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 PP M R + F+TGI+ ID+ PL G + G+F G+G+GK+ LL+ + + Sbjct: 120 PPLMRRSTTSEIFETGIKAIDVLVPLERGGKAGLFGGAGVGKTVLLTEMIHNVVKQHQGV 179 Query: 193 SL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SS 247 S+ +GER RE E D L +V+V +E P R TA+T+AEYF Sbjct: 180 SIFCGIGERCREGEELYRDMKDAGVLPNTVMVFGQMNEPPGARFRVGHTALTMAEYFRDD 239 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 + +VLL++D+I RF + E++ G++P GY ++ +EL L ERI S + G I Sbjct: 240 ERRDVLLLIDNIFRFIQAGSEVSGLMGQMPSRLGYQPTLGTELSELEERI--STTDAGAI 297 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 ++ +V V D+ DP A S L IVL+R A EG YP +DPL S S++A Sbjct: 298 MSIQAVYVPADDFTDPSAVHTFSHLSASIVLSRKRASEGLYPAIDPLQSNSKMATPGIVG 357 Query: 368 DEKKLVSS-LTHLIHRFEETRDI 389 + L++ + + ++ E +DI Sbjct: 358 ERHYLLAQEIRQTLAQYSELKDI 380 >gi|307343618|emb|CBJ19226.1| atpD synthase beta subunit [Micromonospora coerulea] Length = 301 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|311113395|ref|YP_003984617.1| ATP synthase F1 sector subunit beta [Rothia dentocariosa ATCC 17931] gi|310944889|gb|ADP41183.1| ATP synthase F1 sector beta subunit [Rothia dentocariosa ATCC 17931] Length = 480 Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 7/272 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG +D +S D I P + + +TGI+ ID+ TP G Sbjct: 97 GHLFNVLGNALDVPNSDIDADAYWPIHRAAPGFAELEGSTEMLETGIKSIDLLTPYIKGG 156 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 157 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFTGVGERTREGNDLWVEMEEAGVLKDTA 216 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R LT +T+AEYF K +VLL +D+I RF + E++T G +P Sbjct: 217 LVFGQMDEPPGTRLRVALTGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 276 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 277 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATTE 334 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 L+R +A G YP +DPL S SR+ D + E Sbjct: 335 LSREIASRGLYPAIDPLTSTSRILDPQYIGQE 366 >gi|237749342|ref|ZP_04579822.1| F0F1-type ATP synthase [Oxalobacter formigenes OXCC13] gi|229380704|gb|EEO30795.1| F0F1-type ATP synthase [Oxalobacter formigenes OXCC13] Length = 458 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 106/333 (31%), Positives = 168/333 (50%), Gaps = 11/333 (3%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G + + G ++ + G + P+ GR++N LG PID + D + Sbjct: 49 VVRTIALGSSDGLRRGMVIQNTGNPIMVPTGEATLGRIMNVLGDPIDEQGPIATEDRA-S 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFAR 183 I K P ++ +TGI+VID+ P G ++G+F G+G+GK+ L++ A+ Sbjct: 108 IHRKAPAYDELSPSQEILETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAK 167 Query: 184 SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242 V VGER RE +F + N L K +V +E P R LT +TIA Sbjct: 168 QHSGLSVFAG-VGERTREGNDFYHEMKESNVLDKVAMVYGQMNEPPGNRLRVALTGLTIA 226 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 E F +G +VL +D+I RF + E++ G +P A GY ++ E+ +L ERI + Sbjct: 227 ESFRDQGRDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERI--TST 284 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 G+IT++ +V V D+ DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 285 TTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLD 344 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E + + ++ R++E RDI I G Sbjct: 345 PLVVGEEHYQTARQVQGILQRYKELRDIIAILG 377 >gi|307128522|ref|YP_003880552.1| F0F1 ATP synthase subunit beta [Candidatus Sulcia muelleri CARI] gi|306482984|gb|ADM89854.1| F0F1 ATP synthase subunit beta [Candidatus Sulcia muelleri CARI] Length = 495 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 112/373 (30%), Positives = 180/373 (48%), Gaps = 49/373 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N +G IDG LG + S +I + K PP TGI+VID+ P Sbjct: 92 GRVFNVVGNTIDG---LGDLNNSKKISIHKNPPKFEELSTNINILYTGIKVIDLVEPYIK 148 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL--- 214 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + + + Sbjct: 149 GGKIGLFGGAGVGKTVLIQELINNIAKGYGGLSVFAGVGERTREGNDLLREMISSGIIKY 208 Query: 215 -------------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF--SS 247 K+ V +E P R L+ +T+AEY+ S Sbjct: 209 GSSFLEEMKNGKWDLSKVDKKELKKSKATFVFGQMNEPPGARARVVLSGLTLAEYYRDSG 268 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 KG +VL +D+I RF + E++ G +P A GY ++ SE+ + ERI + + G+I Sbjct: 269 KGRDVLFFIDNIFRFTQAGSELSALLGRMPSAVGYQPTLASEMGTMQERI--TSTKNGSI 326 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T++ +V + D+ +DP + S LD VL+R ++ G YP VDPL+S SR+ K + Sbjct: 327 TSIQAVYIPADDLSDPAPATTFSHLDATTVLSRKISSLGIYPAVDPLSSTSRILSKEFIG 386 Query: 368 DEKKLVSS-LTHLIHRFEETRDIRLIGGYR--PGVDLILDKAVHQVPIIYDFLKQSPSDL 424 ++ L + + ++ R++E +DI I G D I+ VH+ + FL Q P + Sbjct: 387 NDHYLCAQRVKQILQRYQELQDIIAILGIEELSEEDKII---VHRARRVQRFLSQ-PFHV 442 Query: 425 SSEDVFQEITKKL 437 + + F IT KL Sbjct: 443 AEQ--FTGITGKL 453 >gi|300741315|ref|ZP_07071336.1| ATP synthase F1, beta subunit [Rothia dentocariosa M567] gi|300380500|gb|EFJ77062.1| ATP synthase F1, beta subunit [Rothia dentocariosa M567] Length = 483 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 7/272 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G + N LG +D +S D I P + + +TGI+ ID+ TP G Sbjct: 100 GHLFNVLGNALDVPNSDIDADAYWPIHRAAPGFAELEGSTEMLETGIKSIDLLTPYIKGG 159 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E LK + Sbjct: 160 KIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFTGVGERTREGNDLWVEMEEAGVLKDTA 219 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R LT +T+AEYF K +VLL +D+I RF + E++T G +P Sbjct: 220 LVFGQMDEPPGTRLRVALTGLTMAEYFRDVKNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 279 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 280 SAVGYQPNLADEMGLLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLDATTE 337 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 L+R +A G YP +DPL S SR+ D + E Sbjct: 338 LSREIASRGLYPAIDPLTSTSRILDPQYIGQE 369 >gi|156530209|gb|ABU75201.1| AtpB [Simarouba glauca] Length = 475 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 88 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 204 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 205 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 383 KELQDIIAILG 393 >gi|156530137|gb|ABU75165.1| AtpB [Hannoa undulata] Length = 470 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 202 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 381 KELQDIIAILG 391 >gi|21226881|ref|NP_632803.1| V-type ATP synthase subunit B [Methanosarcina mazei Go1] gi|20905186|gb|AAM30475.1| A1AO H+ ATPase subunit B [Methanosarcina mazei Go1] Length = 478 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 30/361 (8%) Query: 50 VHQGKNSDNLGQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINA 108 + G + GQV+ + DIV + G G ++F ++ S GR+++ Sbjct: 50 IKMGDGTVRRGQVLDSSADIVVVQVFEGTGGLDKDCGVIFTGETLKLPASVDLLGRILSG 109 Query: 109 LGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 G+P DG D L +M +++PP K F +TGI ID L G Sbjct: 110 SGEPRDGGPRIVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRG 161 Query: 162 QRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 Q++ +F+ SG+ + + AR S+ V+ + +G E + F+ D+ L Sbjct: 162 QKLPIFSASGLPHNEIALQIARQASVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGAL 221 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273 +++VV + +D+ + R + P A+T AEY + G +VL+IL IT +A ++R++ Sbjct: 222 ERAVVFLNLADDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAAR 281 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 E+P RGYP ++++L L ER G + KG++T + + + GD+ PI D I + Sbjct: 282 NEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITE 341 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDI 389 G IV+ R L +G YPP++ L S+SRL + A ++ K VS + + E RD+ Sbjct: 342 GQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKTREDHKAVSD--QMYAGYAEGRDL 399 Query: 390 R 390 R Sbjct: 400 R 400 >gi|257886751|ref|ZP_05666404.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,141,733] gi|315641955|ref|ZP_07896893.1| V-type ATP synthase, subunit B [Enterococcus italicus DSM 15952] gi|257822805|gb|EEV49737.1| sodium-transporting two-sector ATPase [Enterococcus faecium 1,141,733] gi|315482377|gb|EFU72920.1| V-type ATP synthase, subunit B [Enterococcus italicus DSM 15952] Length = 458 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 162/319 (50%), Gaps = 19/319 (5%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116 GQV+ + D +V I G + + F + S GRV + LG+P D G Sbjct: 42 GQVLEVQEDKAMVQIFEGTSGINLRDSSVRFLGHPLELGVSEDMIGRVFDGLGRPKDNGP 101 Query: 117 DSLGKG--DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + L + D++ E+++ V R ++ +TGI ID L GQ++ VF+GSG+ Sbjct: 102 EILPEKYLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPH 157 Query: 175 STLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 L + AR SD F V+ + +G E F+ED+ + +SV+ + +++ Sbjct: 158 KELAAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLAND 216 Query: 227 SPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 I R P A+T AEY + KG +VL+I+ +T +A ++REI+ E+P RGYP Sbjct: 217 PAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGY 276 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 +++ L L ER G KG++T + + + D+ PI D I +G I+L R L + Sbjct: 277 LYTNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKS 336 Query: 346 GRYPPVDPLASVSRLADKA 364 G PP+D L S+SRL DK Sbjct: 337 GIQPPIDVLPSLSRLKDKG 355 >gi|255324527|ref|ZP_05365644.1| ATP synthase F1, beta subunit [Corynebacterium tuberculostearicum SK141] gi|311740603|ref|ZP_07714430.1| ATP synthase F1 sector beta subunit [Corynebacterium pseudogenitalium ATCC 33035] gi|255298433|gb|EET77733.1| ATP synthase F1, beta subunit [Corynebacterium tuberculostearicum SK141] gi|311304123|gb|EFQ80199.1| ATP synthase F1 sector beta subunit [Corynebacterium pseudogenitalium ATCC 33035] Length = 481 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/299 (32%), Positives = 165/299 (55%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D + LG+ D + + PPA ++ + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-EPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 281 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 338 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++A +G YP V+PL S SR+ + ++ ++ + ++ + +E +DI I G Sbjct: 339 ELDRAIASKGIYPAVNPLTSTSRILEPGIVGEKHYEVAQRVIGILQKNKELQDIIAILG 397 >gi|197103703|ref|YP_002129080.1| ATP synthase F1, beta subunit atpD [Phenylobacterium zucineum HLK1] gi|196477123|gb|ACG76651.1| ATP synthase F1, beta subunit atpD [Phenylobacterium zucineum HLK1] Length = 511 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 158/314 (50%), Gaps = 23/314 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + + + I + P + + TGI+VID+ P Sbjct: 117 ATLGRIMNVIGEPIDEAGPIKTTEYA-PIHREAPSFAEQSTSAEVLVTGIKVIDLMCPYT 175 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK 215 G +IG+F G+G+GK+ L++ A++ V+ VGER RE + + + N+ Sbjct: 176 KGGKIGLFGGAGVGKTVTMQELINNIAKAYGGYSVLAG-VGERTREGNDLYHEMIESNVN 234 Query: 216 -------------KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261 K +V +E P R LT +T AEYF +G +VLL +D+I R Sbjct: 235 VDPKKNNGSTEGSKCALVYGQMNEPPGARARVALTGLTQAEYFRDVEGKDVLLFVDNIFR 294 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + KG+IT+V ++ V D+ Sbjct: 295 FTQAGAEVSALLGRIPSAVGYQPTLATEMGNLQERI--TSTNKGSITSVQAIYVPADDLT 352 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LI 380 DP + + LD VL+R +A + +P VDPL S SR+ D +E V+ T ++ Sbjct: 353 DPAPATSFAHLDATTVLSRDIAAQAIFPAVDPLDSTSRIMDPLVIGEEHYQVARRTQEIL 412 Query: 381 HRFEETRDIRLIGG 394 +++ +DI I G Sbjct: 413 QQYKALKDIIAILG 426 >gi|257897933|ref|ZP_05677586.1| sodium-transporting two-sector ATPase [Enterococcus faecium Com15] gi|257835845|gb|EEV60919.1| sodium-transporting two-sector ATPase [Enterococcus faecium Com15] Length = 458 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 162/319 (50%), Gaps = 19/319 (5%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116 GQV+ + D +V I G + + F + S GRV + LG+P D G Sbjct: 42 GQVLEVQEDKAMVQIFEGTSGINLRDSSVRFLGHPLELGVSEDMIGRVFDGLGRPKDNGP 101 Query: 117 DSLGKG--DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + L + D++ E+++ V R ++ +TGI ID L GQ++ VF+GSG+ Sbjct: 102 EILPEKYLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPH 157 Query: 175 STLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 L + AR SD F V+ + +G E F+ED+ + +SV+ + +++ Sbjct: 158 KELAAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLAND 216 Query: 227 SPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 I R P A+T AEY + KG +VL+I+ +T +A ++REI+ E+P RGYP Sbjct: 217 PAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGY 276 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 +++ L L ER G KG++T + + + D+ PI D I +G I+L R L + Sbjct: 277 LYTNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKS 336 Query: 346 GRYPPVDPLASVSRLADKA 364 G PP+D L S+SRL DK Sbjct: 337 GIQPPIDVLPSLSRLKDKG 355 >gi|323483470|ref|ZP_08088857.1| hypothetical protein HMPREF9474_00606 [Clostridium symbiosum WAL-14163] gi|323691023|ref|ZP_08105309.1| V-type sodium ATPase [Clostridium symbiosum WAL-14673] gi|323403168|gb|EGA95479.1| hypothetical protein HMPREF9474_00606 [Clostridium symbiosum WAL-14163] gi|323504962|gb|EGB20738.1| V-type sodium ATPase [Clostridium symbiosum WAL-14673] Length = 456 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/316 (30%), Positives = 159/316 (50%), Gaps = 26/316 (8%) Query: 98 SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 S GRV + LG+PIDG D+ L M ++ P E+ +TGI Sbjct: 82 SEDMLGRVFDGLGRPIDGGPEILPDERRDINGLPMNPAARSYP-------EEFIQTGISA 134 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREF 205 ID L GQ++ +F+ SG+ + L + AR +D V+ + +G E F Sbjct: 135 IDGLNTLVRGQKLPIFSASGLPHANLAAQIARQARVRGTDENFAVVFAAMGITFEESNFF 194 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 IE + + ++V+ V +++ + R P A+T AEY + + D +VL+IL IT +A Sbjct: 195 IESFKETGAIDRTVLFVNLANDPAVERIATPRMALTAAEYLAFEKDMHVLVILTDITNYA 254 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 ++RE++ E+P RGYP ++++L L ER G + + G+IT + + + D+ P Sbjct: 255 DALREVSAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKSGSITMIPILTMPEDDKTHP 314 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTH 378 I D I +G I+L+R L +G PP+D L S+SRL DK AD ++ L Sbjct: 315 IPDLTGYITEGQIILSRELYRKGITPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFA 374 Query: 379 LIHRFEETRDIRLIGG 394 R +E +++ +I G Sbjct: 375 AYARGKEAKELMVILG 390 >gi|227552087|ref|ZP_03982136.1| proton (H+) or sodium (Na+) translocating V-type ATPase (V-ATPase), subunit B [Enterococcus faecium TX1330] gi|257895317|ref|ZP_05674970.1| sodium-transporting two-sector ATPase [Enterococcus faecium Com12] gi|293378188|ref|ZP_06624357.1| ATP synthase ab C-terminal domain protein [Enterococcus faecium PC4.1] gi|227178840|gb|EEI59812.1| proton (H+) or sodium (Na+) translocating V-type ATPase (V-ATPase), subunit B [Enterococcus faecium TX1330] gi|257831882|gb|EEV58303.1| sodium-transporting two-sector ATPase [Enterococcus faecium Com12] gi|292643052|gb|EFF61193.1| ATP synthase ab C-terminal domain protein [Enterococcus faecium PC4.1] Length = 458 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 162/319 (50%), Gaps = 19/319 (5%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPID-GD 116 GQV+ + D +V I G + + F + S GRV + LG+P D G Sbjct: 42 GQVLEVQEDKAMVQIFEGTSGINLRDSSVRFLGHPLELGVSEDMIGRVFDGLGRPKDNGP 101 Query: 117 DSLGKG--DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + L + D++ E+++ V R ++ +TGI ID L GQ++ VF+GSG+ Sbjct: 102 EILPEKYLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPH 157 Query: 175 STLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 L + AR SD F V+ + +G E F+ED+ + +SV+ + +++ Sbjct: 158 KELAAQIARQATVLDSSDDF-AVVFAAIGITFEEAEFFMEDFRQTGAIDRSVMFMNLAND 216 Query: 227 SPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 I R P A+T AEY + KG +VL+I+ +T +A ++REI+ E+P RGYP Sbjct: 217 PAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYAEALREISAARREVPGRRGYPGY 276 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 +++ L L ER G KG++T + + + D+ PI D I +G I+L R L + Sbjct: 277 LYTNLATLFERAGRIRGLKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQIILTRELYKS 336 Query: 346 GRYPPVDPLASVSRLADKA 364 G PP+D L S+SRL DK Sbjct: 337 GIQPPIDVLPSLSRLKDKG 355 >gi|66276263|gb|AAY44146.1| ATP synthase beta subunit [Combretocarpus rotundatus] Length = 479 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 86 GTTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSG 202 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 203 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 263 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE K + + R+ Sbjct: 321 PATTFAHLDATTVLSRRLAAKGIYPAVDPLDSTSTMLQPQIVGDEHYKTAQRVKQTLQRY 380 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 381 KELQDIIAILG 391 >gi|294496093|ref|YP_003542586.1| ATP synthase subunit beta [Methanohalophilus mahii DSM 5219] gi|292667092|gb|ADE36941.1| ATP synthase, B subunit [Methanohalophilus mahii DSM 5219] Length = 460 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/353 (28%), Positives = 179/353 (50%), Gaps = 34/353 (9%) Query: 60 GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ + D+V I G+ +E +VF ++ + GR+++ G+P+DG Sbjct: 42 GQVLDTSADMVVIQVFEGTQGLNDE---SGVVFSGETIKLPVAKDLLGRILSGSGEPLDG 98 Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 + + SM S+ PP ++ +TGI ID L GQ++ +F+G Sbjct: 99 GPRIIPEKRVDVNGASMNPFSRRPP-------DEFIQTGISTIDGTNTLVRGQKLPIFSG 151 Query: 170 SGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVA 222 SG+ + + AR S+ V+ + +G E + F+ED+ L+++ V + Sbjct: 152 SGLPHNEIALQIARQAKVPGSEEDFAVVFAAMGITNEEAQSFMEDFEKTGALERATVFLN 211 Query: 223 TSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281 +D+ + R + P A+T AEY + + D +VL+IL IT + ++R++ E+P RG Sbjct: 212 LADDPAVERIITPRMALTAAEYLAYEHDMHVLVILTDITNYCEALRQMGAAREEVPGRRG 271 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP ++++L L ER G + KG++T + + GD+ PI D I +G IV++R Sbjct: 272 YPGYMYTDLASLYERAGVIKGNKGSVTQFSILTMPGDDITHPIPDLSGYITEGQIVVSRE 331 Query: 342 LAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390 L +G YPP++ L S+SRL + + + ++ K VS L + E RD+R Sbjct: 332 LHRKGIYPPINVLPSLSRLMNSGIGEGKTREDHKAVSD--QLYAGYAEGRDLR 382 >gi|225554645|gb|EEH02941.1| ATP synthase subunit beta [Ajellomyces capsulatus G186AR] gi|240276989|gb|EER40499.1| mitochondrial ATP synthase [Ajellomyces capsulatus H143] gi|325094927|gb|EGC48237.1| mitochondrial ATP synthase [Ajellomyces capsulatus H88] Length = 522 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K I ++ P + + + TGI+V+D+ P G Sbjct: 134 LGRIMNVTGDPIDERGPI-KHTKKAPIHAEAPEYVEQATSAEVLVTGIKVVDLLAPYARG 192 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 193 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETRVIQL 251 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 252 DGESKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 311 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 312 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 369 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D +E V++ + ++ ++ +DI Sbjct: 370 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYNVATRVQQMLQEYKSLQDI 429 Query: 390 RLIGG 394 I G Sbjct: 430 IAILG 434 >gi|332878768|ref|ZP_08446484.1| ATP synthase F1, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683296|gb|EGJ56177.1| ATP synthase F1, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 502 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/330 (30%), Positives = 159/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G +DG +L K GD + I P + + TGI+VID+ P G Sbjct: 89 GRLFNVIGDGVDGLGNLPKEGDNGLPIHRPAPKFEDLSTTTEVLFTGIKVIDLIEPYAKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 149 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 208 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D K+ V +E P R L+ +T+AEYF Sbjct: 209 DAFMESMEKGGWDLSKVDKNALKESKATFVFGQMNEPPGARARVALSGLTVAEYFRDGAG 268 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + + G Sbjct: 269 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKHG 326 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 327 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 386 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + + L+ R++E +DI I G Sbjct: 387 LGKEHYECAQRVKQLLQRYKELQDIIAILG 416 >gi|170293979|gb|ACB13083.1| ATP synthase beta subunit [Prasiola calophylla] Length = 366 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/316 (32%), Positives = 163/316 (51%), Gaps = 24/316 (7%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 + PS GR+ N LG+P+D +LG D S+ I P ++ F+TGI+V+ Sbjct: 16 VGPSTL--GRIFNVLGEPVD---NLGPVDAKESLPIHRSAPAFVDLDTKLAIFETGIKVV 70 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211 D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 71 DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEM 130 Query: 212 --------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSIT 260 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I Sbjct: 131 KESKVINEDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIF 190 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ SE+ +L ERI + + G+IT++ +V V D+ Sbjct: 191 RFVQAGSEVSALLGRMPSAVGYQPTLASEMGKLQERI--TSTKDGSITSIQAVYVPADDL 248 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTH 378 DP + + LD VL+R LA +G YP VDPL S S + + W E+ ++ Sbjct: 249 TDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYACAQNVKE 307 Query: 379 LIHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 308 TLQRYKELQDIIAILG 323 >gi|20137394|sp|Q92G88|ATPB_RICCN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 473 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/319 (31%), Positives = 159/319 (49%), Gaps = 25/319 (7%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMS---KVPPAMNRQRVEKG-FKTGI 149 RI GR++N +G+PIDG KGD+ +S K P Q E TGI Sbjct: 80 RIPVGTETLGRIMNVVGEPIDG-----KGDIKSSNISSIYKPAPDFTHQSTECNILVTGI 134 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFI 206 +VID+ P G +IG+F G+G+GK+ L+ + + + VGER RE + Sbjct: 135 KVIDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLY 194 Query: 207 EDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLIL 256 + + + K +V +E P R L+ +TIAE F ++G +VL + Sbjct: 195 HEMIDSGVINLAEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNEGQDVLFFV 254 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V Sbjct: 255 DNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKYGSITSVQAIYVP 312 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-S 375 D+ DP + + LD VL+R +AE G YP VDPL S S++ D +E V+ Sbjct: 313 ADDLTDPAPATSFAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQ 372 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 373 VQQVLQTYKSLQDIITILG 391 >gi|307343606|emb|CBJ19220.1| atpD synthase beta subunit [Micromonospora auratinigra] Length = 298 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFRVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|302567345|gb|ADL41371.1| ATP synthase B subunit [Prasiola crispa] Length = 366 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 20/314 (6%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 + PS GR+ N LG+P+D +G + + I P ++ F+TGI+V+D+ Sbjct: 16 VGPSTL--GRIFNVLGEPVDNLGPVGNKE-GLPIHRSAPAFVDLDTKLAIFETGIKVVDL 72 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 73 LAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKE 132 Query: 212 ------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 133 SKVINEDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF 192 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ SE+ +L ERI + + G+IT++ +V V D+ D Sbjct: 193 VQAGSEVSALLGRMPSAVGYQPTLASEMGKLQERI--TSTKDGSITSIQAVYVPADDLTD 250 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLI 380 P + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + Sbjct: 251 PAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYACAQNVKETL 309 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 310 QRYKELQDIIAILG 323 >gi|183206614|gb|ACC54505.1| ATP synthase beta subunit [Musschia aurea] Length = 488 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 209 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 210 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIITILG 399 >gi|56236576|gb|AAV84655.1| ATP synthase beta subunit [Phyllocladus alpinus] Length = 424 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D S I P + F+TGI+V+D+ Sbjct: 34 GATLGRIFNVLGEPVD---DLGPVDASARSPIHRPAPAFIQLDTKFSIFETGIKVVDLLA 90 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + V + S VGER RE + + Sbjct: 91 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 150 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 151 VIREQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + +E + + + R+ Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|3676296|gb|AAD03392.1| mitochondrial ATPase beta subunit [Nicotiana sylvestris] Length = 556 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 161/313 (51%), Gaps = 25/313 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+IN +G+PID +GD++ + I + P + + ++ TGI+V+D+ Sbjct: 164 ATLGRIINVIGEPIDE-----RGDINTDHFLPIHREAPAFVEQATEQQILVTGIKVVDLL 218 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + S+ VGE E RE IE Sbjct: 219 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFPGVGEPSAEGNDLYREMIES 278 Query: 209 ---YLGDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRF 262 LGD +S +V +E P R LT +T+AE+F ++G +VLL +D+I RF Sbjct: 279 GVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRF 338 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ D Sbjct: 339 TQANSEVSALLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTD 396 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381 P + + LD VL+R ++E G YP VDPL S SR L+ D + ++ Sbjct: 397 PAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQ 456 Query: 382 RFEETRDIRLIGG 394 ++ +DI I G Sbjct: 457 NYKNLQDIIAILG 469 >gi|87311750|ref|ZP_01093865.1| H+-transporting ATP synthase beta chain [Blastopirellula marina DSM 3645] gi|87285534|gb|EAQ77453.1| H+-transporting ATP synthase beta chain [Blastopirellula marina DSM 3645] Length = 503 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 113/333 (33%), Positives = 173/333 (51%), Gaps = 23/333 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LG+ IDG + D + I PP + F+TGI+VID+ TP G Sbjct: 115 GRVFNVLGETIDGRGPIEADDF-LPIHRSSPPVSELSTSTEVFETGIKVIDLLTPFVRGG 173 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLGDN-- 213 + G+F G+G+GK+ +L+ + AR S + + VGER RE E + +G Sbjct: 174 KAGLFGGAGLGKTVILTELIARIASAHGGYSVFAGVGERTREGTDLWLEMQDTEIGQTGR 233 Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 ++++ +V +E P R L+A+T+AEYF + G + LL +D+I RF+ + E++ Sbjct: 234 KVIEQTCMVFGQMNEPPGARLRVALSALTMAEYFRDATGADTLLFIDNIFRFSQAGSEVS 293 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G IT+V +V V D+ DP + Sbjct: 294 ALLGRMPSAVGYQPTLATEMGGLQERI--ASTKSGAITSVQAVYVPADDPTDPAPATAFG 351 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389 LD I L RS++E+G YP VDPLAS SR+ D + A + + + R+ E +DI Sbjct: 352 QLDAFIYLERSISEKGIYPAVDPLASSSRILDPQYVGARHYAIARRVQTTLQRYRELQDI 411 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I GVD + + VH+ I FL Q Sbjct: 412 IAI----LGVDELSESDKLIVHRARRIERFLSQ 440 >gi|307343724|emb|CBJ19279.1| atpD synthase beta subunit [Micromonospora sp. SG2] Length = 302 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|170784769|ref|YP_001718685.1| ATP synthase CF1 beta subunit [Trachelium caeruleum] gi|156598793|gb|ABU85650.1| ATP synthase CF1 beta subunit [Trachelium caeruleum] gi|157267517|gb|ABV26510.1| ATP synthase CF1 beta subunit [Trachelium caeruleum] gi|183206660|gb|ACC54528.1| ATP synthase beta subunit [Trachelium caeruleum] Length = 498 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|34536483|dbj|BAC87675.1| beta subunit of ATP synthase [Hafniomonas montana] Length = 376 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + S+ I P ++ F+TGI+V+D+ P Sbjct: 29 ATLGRIFNVLGEPVDNMGPV-SAENSLPIHRTSPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYAEMKESGVIV 147 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF + +VLL +D++ R + Sbjct: 148 EKNLAESKVALVYGQMNEPPGARMRVALTALTMAEYFRDQNKQDVLLFIDNVFRLVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ + ERI + + G+IT++ +V V D+ DP + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGAVQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 V + LD VL+R+LA +G YP VDPL S S + + W +K S+ + R++E Sbjct: 266 VFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDKHYDCAQSVKRTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|309812150|ref|ZP_07705908.1| ATP synthase F1, beta subunit [Dermacoccus sp. Ellin185] gi|308433837|gb|EFP57711.1| ATP synthase F1, beta subunit [Dermacoccus sp. Ellin185] Length = 486 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 162/304 (53%), Gaps = 19/304 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-----MSKVPPAMNR-QRVEKGFKTGIRVIDIFT 156 G V NA G +D L +G+ +E+ + + PA ++ + F+TGI+VID+ T Sbjct: 105 GHVFNATGDCLD----LEEGE-KLEVNERWGIHRTAPAFDQLESKTTMFETGIKVIDLLT 159 Query: 157 PLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGD 212 P G +IG+F G+G+GK+ L+ M AR + + + VGER RE + +E Sbjct: 160 PYVQGGKIGLFGGAGVGKTVLIQEMIARVARNHGGVSVFAGVGERTREGNDLMVEMEEAG 219 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIAT 271 L ++ +V DE P R L+A+T+AEYF + +VLL +D+I RF + E++T Sbjct: 220 VLGQTALVFGQMDEPPGTRLRVALSALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVST 279 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + Sbjct: 280 LLGRMPSAVGYQPTLADEMGVLQERITSTRGH--SITSMQAIYVPADDYTDPAPATTFAH 337 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIR 390 LD L+R +A G YP VDPL S SR+ D + S + + + ++ R +E +DI Sbjct: 338 LDATTELSRDIASMGIYPAVDPLTSTSRILDPRYISKEHYETAVRIKSILQRNKELQDII 397 Query: 391 LIGG 394 I G Sbjct: 398 AILG 401 >gi|156530213|gb|ABU75203.1| AtpB [Simarouba tulae] Length = 471 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 90 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 206 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 385 KELQDIIAILG 395 >gi|156530207|gb|ABU75200.1| AtpB [Simarouba amara] Length = 465 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 81 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 137 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 197 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 198 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 257 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 315 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 316 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 375 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 376 KELQDIIAILG 386 >gi|156530151|gb|ABU75172.1| AtpB [Perriera madagascariensis] Length = 498 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|307343746|emb|CBJ19290.1| atpD synthase beta subunit [Micromonospora sp. SGB14] Length = 302 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 143/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R ++ F + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVANNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + + ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|291549078|emb|CBL25340.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus torques L2-14] Length = 457 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 156/305 (51%), Gaps = 15/305 (4%) Query: 98 SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + LG PID G L + + + P A R E+ +TG+ ID Sbjct: 82 SEDMLGRVFDGLGNPIDEGPQILPDARMDINGLPMNPAA--RCYPEEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY 209 L GQ++ +F+ SG+ + L + AR ++ F V+ + +G E FIE + Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVLGTNENF-AVVFAAMGITFEESNFFIESF 198 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 L ++V+ V +++ I R P A+T AEY + + D +VL+IL IT +A ++R Sbjct: 199 RETGALDRTVLFVNLANDPAIERIATPRMALTAAEYLAFEKDMHVLVILTDITNYADALR 258 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ E+P RGYP ++++L L ER G +KG+IT + + + D+ PI D Sbjct: 259 EVSAARKEVPGRRGYPGYLYTDLATLYERAGRQNGKKGSITMIPILTMPEDDKTHPIPDL 318 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 I +G I+L+R L +G PP+D L S+SRL DK A + + +++ L + Sbjct: 319 TGYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGIGAGKTRADHANTMNQLFAAYAR 378 Query: 386 TRDIR 390 +D + Sbjct: 379 GKDAK 383 >gi|156530187|gb|ABU75190.1| AtpB [Simaba guianensis] gi|156530199|gb|ABU75196.1| AtpB [Simaba orinocensis] gi|156530201|gb|ABU75197.1| AtpB [Simaba orinocensis] Length = 496 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|113910770|gb|ABI48117.1| ATPase beta subunit [Blepharostoma trichophyllum] Length = 455 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 184 INEDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 243 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 361 KELQDIIAILG 371 >gi|15604633|ref|NP_221151.1| F0F1 ATP synthase subunit beta [Rickettsia prowazekii str. Madrid E] gi|6226556|sp|O50290|ATPB_RICPR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|3861328|emb|CAA15227.1| ATP SYNTHASE BETA CHAIN (atpD) [Rickettsia prowazekii] Length = 474 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 17/316 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 RI GR++N +G+PIDG + +S I P +N+ TGI+V+ Sbjct: 79 IRIPVGTETLGRIMNVVGEPIDGKGEIKSATIS-SIYKPAPDFINQSTERDILVTGIKVV 137 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + + Sbjct: 138 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEM 197 Query: 210 LGD---NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSI 259 + NL+ K +V +E P R L+ +TIAE F + G +VL +D+I Sbjct: 198 IASGVINLEEPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNI 257 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ Sbjct: 258 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADD 315 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTH 378 DP + + LD VL+R +AE G YP VDPL S S++ D ++ V+ + Sbjct: 316 LTDPAPSTSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEKHYGVARQVQQ 375 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 376 VLQTYKSLQDIIAILG 391 >gi|329890939|ref|ZP_08269282.1| ATP synthase F1, beta subunit [Brevundimonas diminuta ATCC 11568] gi|328846240|gb|EGF95804.1| ATP synthase F1, beta subunit [Brevundimonas diminuta ATCC 11568] Length = 513 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/339 (30%), Positives = 170/339 (50%), Gaps = 30/339 (8%) Query: 79 EEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEI--MSKVPPA 135 E ++ G V G+ ++P GR++N +G+PID + L+ E + K P Sbjct: 97 EGLTRGQPVVDTGKSIMAPVGPGTLGRIMNVVGQPIDEAGPI----LTTEYRPIHKEAPT 152 Query: 136 MNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKV 190 + Q TGI+VID+ P G + G+F G+G+GK+ L++ A++ V Sbjct: 153 FDEQSTSAEILVTGIKVIDLICPYTKGGKTGLFGGAGVGKTVTMQELINNIAKAYGGYSV 212 Query: 191 IISLVGERGREVREFIEDYLGDNLK-------------KSVVVVATSDESPILRKMAPLT 237 + VGER RE + + + N+ K +V +E P R LT Sbjct: 213 LAG-VGERTREGNDLYHEMIESNVNVDPAKNNGSTEGSKCALVYGQMNEPPGARARVALT 271 Query: 238 AVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 ++IAEYF +G +VLL +D+I RF + E++ G +P A GY ++ +E+ L ER Sbjct: 272 GLSIAEYFRDEEGKDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGNLQER 331 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 I + +KG+IT+V ++ V D+ DP + + LD VL+R +A + +P VDPL S Sbjct: 332 I--TSTKKGSITSVQAIYVPADDLTDPAPAASFAHLDATTVLSRDIAAQAIFPAVDPLDS 389 Query: 357 VSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 SR+ D +E V+ + ++ +++ +DI I G Sbjct: 390 TSRIMDPLVIGEEHYQVARRVQEILQQYKALKDIIAILG 428 >gi|307343744|emb|CBJ19289.1| atpD synthase beta subunit [Micromonospora sp. SGA21] Length = 320 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|183206682|gb|ACC54539.1| ATP synthase beta subunit [Berenice arguta] Length = 482 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 88 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 203 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 204 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 263 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 264 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 321 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 322 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 381 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 382 YKELQDIITILG 393 >gi|254173383|ref|ZP_04880056.1| ATP synthase archaeal, B subunit [Thermococcus sp. AM4] gi|214032792|gb|EEB73621.1| ATP synthase archaeal, B subunit [Thermococcus sp. AM4] Length = 465 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/359 (28%), Positives = 180/359 (50%), Gaps = 22/359 (6%) Query: 19 LVVQGGYISSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYIC 73 +++ G S+++ +Y + + + V G+ V + GQV+ R NL IV + Sbjct: 1 MIMPGMEYSTVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVF 60 Query: 74 PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMS 130 ++ + F ++ S GR+ N +GKPIDG + + D+ ++ Sbjct: 61 EGTRDLDVKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------ 184 V A R ++ TGI ID L GQ++ +F+GSG+ + L + AR Sbjct: 121 PVARAYPRDFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGE 176 Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242 + F V+ + +G E F + + ++++V+ + +D+ I R + P A+T+A Sbjct: 177 EEQF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235 Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 EY + D VL+IL +T +A ++REI+ E+P RGYP ++++L + ER G Sbjct: 236 EYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVR 295 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 +KG+IT + + + D+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354 >gi|156530211|gb|ABU75202.1| AtpB [Simarouba glauca] Length = 484 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 159 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 219 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 220 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 398 KELQDIIAILG 408 >gi|156530113|gb|ABU75153.1| AtpB [Brucea tenuifolia] Length = 488 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|23503639|dbj|BAC20416.1| ATP synthase beta-subunit [Dunaliella parva] Length = 376 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/309 (33%), Positives = 161/309 (52%), Gaps = 24/309 (7%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S I P ++ F+TGI+V+D+ P Sbjct: 32 GRIFNVLGEPVD---NLGPCNANQSNPIHHPSPTFVDLDTRLSIFETGIKVVDLLAPYRR 88 Query: 161 GQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 89 GGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVFAG-VGERTREGNDLYGEMKESGVIQ 147 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLFFIDNIFRFVQAGA 207 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 208 EVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPASAT 265 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+RSLA +G YP VDPL S S + + W EK S++ + R++E Sbjct: 266 TFTHLDACTVLSRSLASKGIYPAVDPLDSTSTML-QPWIVGEKHYSTASNVKGTLQRYKE 324 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 325 LQDIIAILG 333 >gi|319944942|ref|ZP_08019204.1| ATP synthase F1 sector beta subunit [Lautropia mirabilis ATCC 51599] gi|319741512|gb|EFV93937.1| ATP synthase F1 sector beta subunit [Lautropia mirabilis ATCC 51599] Length = 474 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/304 (32%), Positives = 155/304 (50%), Gaps = 25/304 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GRV++ LG+PID +G + E I P + +TGI+VID+ P Sbjct: 91 GRVMDVLGRPIDE-----RGPIQTEEHRGIHQPAPKFDELSPSVELLETGIKVIDLICPF 145 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY----- 209 G +IG+F G+G+GK+ L++ A+ V VGER RE +F + Sbjct: 146 AKGGKIGLFGGAGVGKTVNMLELINNIAKEHSGLSVFAG-VGERTREGNDFYHEMSDAKV 204 Query: 210 -LGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSI 266 + D+L +S V V +E P R LT +T+AE F +G ++L +D+I R+ + Sbjct: 205 IVQDDLSQSKVAMVFGQMNEPPGNRLRVALTGLTMAERFRDEGRDILFFVDNIYRYTLAG 264 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP Sbjct: 265 TEVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKTGSITSIQAVYVPADDLTDPSPA 322 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + LD +VL+R +A G YP VDPL S SR D +E V+ + + R++E Sbjct: 323 TTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNIIGEEHYNVTRGVQATLQRYKE 382 Query: 386 TRDI 389 RDI Sbjct: 383 LRDI 386 >gi|255658916|ref|ZP_05404325.1| ATP synthase F1, beta subunit [Mitsuokella multacida DSM 20544] gi|260848866|gb|EEX68873.1| ATP synthase F1, beta subunit [Mitsuokella multacida DSM 20544] Length = 470 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 93/305 (30%), Positives = 155/305 (50%), Gaps = 9/305 (2%) Query: 97 PSACWC-GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 P C GRV N LG+ +D + + I P ++ + +TGI+V+D+ Sbjct: 82 PVGTECLGRVFNVLGQTVDHNPAPVGNKEFWPIHRPAPKFDEQETSAQVLETGIKVVDLI 141 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD 212 P G + G+F G+G+GK+ L+ + + + + VGER RE + + Sbjct: 142 APYSKGGKTGLFGGAGVGKTVLIMELIHNIATEHGGYSVFAGVGERTREGNDLWGEMTES 201 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + K+ +V +E P R LT +T+AEYF + +VLL +D+I RF + E++ Sbjct: 202 GVIDKTALVYGQMNEPPGARMRVALTGLTMAEYFRDVQHQDVLLFIDNIFRFIQAGSEVS 261 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +++ L ERI + + G+IT+V +V V D+ DP + Sbjct: 262 ALLGRMPSAVGYQPTLSTDIGALQERI--TSTKNGSITSVQAVYVPADDLTDPAPAGTFT 319 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R +AE G YP VDPL S SR+ + +E K+ + ++ +++E +DI Sbjct: 320 HLDATTVLSRQIAELGIYPAVDPLDSTSRILNAEVLGEEHYKVARGVQAVLQKYKELQDI 379 Query: 390 RLIGG 394 I G Sbjct: 380 IAILG 384 >gi|37720963|gb|AAN32484.1| ATP synthase beta subunit [Mayaca fluviatilis] Length = 482 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 89 GTTLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF G +VLL +D+I RF Sbjct: 206 VINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|268575600|ref|XP_002642779.1| C. briggsae CBR-ATP-2 protein [Caenorhabditis briggsae] gi|187022807|emb|CAP38046.1| CBR-ATP-2 protein [Caenorhabditis briggsae AF16] Length = 537 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 148/273 (54%), Gaps = 18/273 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + + + I ++ P + ++ TGI+V+D+ P G Sbjct: 151 GRIMNVIGEPIDERGPIPSKNFA-PIHAEAPEFVEMSVEQEILVTGIKVVDLLAPYAKGG 209 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIE----DYL 210 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE D Sbjct: 210 KIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIEGGVIDLK 268 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 G N K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 269 GKNSKVSLVY-GQMNEPPGARARVCLTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 327 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 328 SALLGRIPSAVGYQPTLATDMGGMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 385 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + LD VL+R +AE YP VDPL S SR+ D Sbjct: 386 AHLDATTVLSRGIAELAIYPAVDPLDSTSRIMD 418 >gi|254515887|ref|ZP_05127947.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR5-3] gi|219675609|gb|EED31975.1| ATP synthase F1, beta subunit [gamma proteobacterium NOR5-3] Length = 465 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 94/305 (30%), Positives = 154/305 (50%), Gaps = 15/305 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+++ LG PID +G+ + + I P + +TGI+VID+ P G Sbjct: 83 LGRIMDVLGNPIDERGPIGEQERA-SIHRAAPTYEELSASDDLLETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210 ++G+F G+G+GK+ + + +S+ VGER RE +F + D Sbjct: 142 GKVGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQESKVVDLE 201 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 202 NPANSKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVS 261 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 262 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFA 319 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD +VL+R +A +G YP VDPL S SR D +E + +++ R++E +DI Sbjct: 320 HLDSTVVLSRDIAAKGIYPAVDPLDSTSRQLDPLLIGNEHYDTARGVQNVLQRYKELKDI 379 Query: 390 RLIGG 394 I G Sbjct: 380 IAILG 384 >gi|156530193|gb|ABU75193.1| AtpB [Simaba guianensis] Length = 495 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 217 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 396 KELQDIIAILG 406 >gi|295084021|emb|CBK65544.1| ATP synthase, F1 beta subunit [Bacteroides xylanisolvens XB1A] Length = 505 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 161/328 (49%), Gaps = 48/328 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + D + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKGLNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYAKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE------ 207 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 208 ------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS 247 DY + L+KS V + +E P R L+ +T+AE F Sbjct: 210 GEAFKESMEKGHWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESFRD 267 Query: 248 KGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 268 AGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TST 325 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 KG+IT+V +V V D+ DP + S LD VL+R + E G YP VDPLAS SR+ D Sbjct: 326 RKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILD 385 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDI 389 E + + ++ R +E +DI Sbjct: 386 PHIVGQEHYDIAQRVKQILQRNKELQDI 413 >gi|156530131|gb|ABU75162.1| AtpB [Gymnostemon zaizou] gi|156530133|gb|ABU75163.1| AtpB [Hannoa chlorantha] Length = 494 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 216 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 395 KELQDIIAILG 405 >gi|113476898|ref|YP_722959.1| F0F1 ATP synthase subunit beta [Trichodesmium erythraeum IMS101] gi|123056409|sp|Q10Z38|ATPB_TRIEI RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|110167946|gb|ABG52486.1| ATP synthase F1, beta subunit [Trichodesmium erythraeum IMS101] Length = 484 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/310 (33%), Positives = 165/310 (53%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N +G+P+D +G D S I + P ++ + F+TGI+V+D+ P Sbjct: 95 ATLGRIFNVVGEPVDELGPVGTEDKS-PIHREAPKLVDLETQPSVFETGIKVVDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L++ A++ V + ER RE E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYNEMIESKVI 212 Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHS 265 +NL +S V V +E P R L+A+T+AEYF SK D VLL +D+I RF + Sbjct: 213 NPENLSESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVSKQD-VLLFIDNIFRFVQA 271 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 GSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTKEGSITSIQAVYVPADDLTDPAP 329 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + E V+ ++ + R++ Sbjct: 330 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSVVGKEHYDVARAVQSTLQRYK 389 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 390 ELQDIIAILG 399 >gi|89899957|ref|YP_522428.1| F0F1 ATP synthase subunit beta [Rhodoferax ferrireducens T118] gi|123091414|sp|Q21ZA6|ATPB2_RHOFD RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|89344694|gb|ABD68897.1| ATP synthase F1, beta subunit [Rhodoferax ferrireducens T118] Length = 518 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/293 (32%), Positives = 153/293 (52%), Gaps = 11/293 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 R+ + G ID + +L D+ + + PP + R+ + F+TGI+VID+ PL G Sbjct: 91 RMFDVFGNTIDRETALS--DVQWRSVHRAPPPLARRSTKSEIFETGIKVIDVLMPLERGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 + G+F G+G+GK+ LL+ + +S+ +GER RE E D L V Sbjct: 149 KAGLFGGAGVGKTVLLTEMIHNMVGQHEGVSIFCGIGERCREGEELYRDMKQAGVLPNMV 208 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 ++ A +E P R A+T+AEYF + ++LL++D+I RF + E++ G++P Sbjct: 209 MIFAQMNEPPGARFRVGHAALTMAEYFRDDEHRDMLLLIDNIFRFIQAGMEVSGLMGQMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +EL L ERI + + G IT++ +V V D+ DP A S L IV Sbjct: 269 SRLGYQPTMGTELSGLEERI--ANTDTGAITSIQAVYVPADDFTDPAAVHTFSHLSASIV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDI 389 L+R A EG YP +DPL S S++A + A L + + ++ E +DI Sbjct: 327 LSRKRASEGLYPAIDPLQSSSKMATPSIVGARHYGLAQEIRRTLAQYAELKDI 379 >gi|331084155|ref|ZP_08333261.1| V-type ATP synthase subunit beta [Lachnospiraceae bacterium 6_1_63FAA] gi|330402010|gb|EGG81583.1| V-type ATP synthase subunit beta [Lachnospiraceae bacterium 6_1_63FAA] Length = 457 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 167/332 (50%), Gaps = 27/332 (8%) Query: 98 SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + LG+PID G + L + + + P A R E+ +TG+ ID Sbjct: 82 SEDMLGRVFDGLGRPIDDGPEILPDARMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDY 209 L GQ++ +F+ SG+ + L + AR + F V+ + +G E F E + Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVRGSGENF-AVVFAAMGITFEEANFFTESF 198 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 + ++V+ + +++ + R P A+T AEY + + D +VL+IL IT +A ++R Sbjct: 199 KETGAIDRTVLFINLANDPAVERIATPKMALTAAEYLAFEKDMHVLVILTDITNYADALR 258 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ E+P RGYP ++++L + ER G + +KG+IT + + + D+ PI D Sbjct: 259 EVSAARKEVPGRRGYPGYMYTDLATMYERAGRQKGKKGSITMIPILTMPEDDKTHPIPDL 318 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHR 382 I +G I+L+R L +G PP+D L S+SRL DK AD ++ L R Sbjct: 319 TGYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFAAYAR 378 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 +E +++ +I G + A+ + IIY Sbjct: 379 GKEAKELMVILG---------EAALSDIDIIY 401 >gi|156530203|gb|ABU75198.1| AtpB [Simaba guianensis] gi|156530205|gb|ABU75199.1| AtpB [Simaba polyphylla] Length = 494 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 216 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 395 KELQDIIAILG 405 >gi|156530197|gb|ABU75195.1| AtpB [Simaba insignis] Length = 498 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|156530185|gb|ABU75189.1| AtpB [Simaba cuneata] Length = 497 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 103 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 159 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 219 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 220 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 398 KELQDIIAILG 408 >gi|118444114|ref|YP_877729.1| V-type ATP synthase subunit B [Clostridium novyi NT] gi|171460886|sp|A0PZC7|VATB_CLONN RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|118134570|gb|ABK61614.1| V-type sodium ATP synthase subunit B [Clostridium novyi NT] Length = 460 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/285 (30%), Positives = 153/285 (53%), Gaps = 15/285 (5%) Query: 98 SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 S GRV + +G+P DG + + D++ E ++ R + +TG+ ID Sbjct: 82 SEDMLGRVFDGMGRPKDGGPKIIPEERRDINGEPLN----PFARDYPSEFIQTGVSAIDG 137 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIED 208 L GQ++ VF+GSG+ + L + AR SD V+ + +G E + FI+D Sbjct: 138 LNTLVRGQKLPVFSGSGLPHAELAAQIARQAKVLGSDSKFAVVFAAMGITFEEAQFFIQD 197 Query: 209 YLGD-NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266 + ++ ++V+ + +++ + R P A+T AE+ + KG +VL+I+ +T +A ++ Sbjct: 198 FTKTGSIDRTVLFMNLANDPAVERIATPRIALTTAEFLAYEKGMHVLVIMTDMTNYAEAL 257 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 RE++ E+P RGYP ++++L L ER G + + G+IT + + + D+ PI D Sbjct: 258 REVSAARKEVPGRRGYPGYLYTDLSTLYERAGRVKGKPGSITQIPILTMPEDDKTHPIPD 317 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 I +G I+L+R L ++G PP+D L S+SRL DK D+ + Sbjct: 318 LTGYITEGQIILSRELYKKGIMPPIDVLPSLSRLKDKGIGKDKTR 362 >gi|260587501|ref|ZP_05853414.1| V-type sodium ATPase, B subunit [Blautia hansenii DSM 20583] gi|260541766|gb|EEX22335.1| V-type sodium ATPase, B subunit [Blautia hansenii DSM 20583] Length = 457 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 167/332 (50%), Gaps = 27/332 (8%) Query: 98 SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + LG+PID G + L + + + P A R E+ +TG+ ID Sbjct: 82 SEDMLGRVFDGLGRPIDDGPEILPDARMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDY 209 L GQ++ +F+ SG+ + L + AR + F V+ + +G E F E + Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVRGSGENF-AVVFAAMGITFEEANFFTESF 198 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 + ++V+ + +++ + R P A+T AEY + + D +VL+IL IT +A ++R Sbjct: 199 KETGAIDRTVLFINLANDPAVERIATPKMALTAAEYLAFEKDMHVLVILTDITNYADALR 258 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ E+P RGYP ++++L + ER G + +KG+IT + + + D+ PI D Sbjct: 259 EVSAARKEVPGRRGYPGYMYTDLATMYERAGRQKGKKGSITMIPILTMPEDDKTHPIPDL 318 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHR 382 I +G I+L+R L +G PP+D L S+SRL DK AD ++ L R Sbjct: 319 TGYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFAAYAR 378 Query: 383 FEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 +E +++ +I G + A+ + IIY Sbjct: 379 GKEAKELMVILG---------EAALSDIDIIY 401 >gi|227548012|ref|ZP_03978061.1| ATP synthase beta chain [Corynebacterium lipophiloflavum DSM 44291] gi|227079918|gb|EEI17881.1| ATP synthase beta chain [Corynebacterium lipophiloflavum DSM 44291] Length = 502 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/298 (33%), Positives = 159/298 (53%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG+ +D D S+G I P + + + +TGI+VID+ TP G Sbjct: 124 GHVFNALGECLD-DPSVGVDGERWGIHRDPPAFKDLEGKTEILETGIKVIDLLTPYVKGG 182 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L + Sbjct: 183 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEDMGVLPDTA 242 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 243 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 302 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 303 SAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATTE 360 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L+RS+A +G YP VDPL S SR+ + + V+ + ++ + +E +DI I G Sbjct: 361 LSRSIASKGIYPAVDPLTSTSRILEPGIVGERHYAVAQKVIGILQKNKELQDIIAILG 418 >gi|156530195|gb|ABU75194.1| AtpB [Simaba guianensis] Length = 498 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|171191279|gb|ACB45107.1| AtpB [Simaba suffruticosa] Length = 476 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|156530215|gb|ABU75204.1| AtpB [Simarouba versicolor] Length = 496 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|21684907|emb|CAD11580.1| ATP synthase beta subunit [Mayaca fluviatilis] Length = 491 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 98 GTTLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF G +VLL +D+I RF Sbjct: 215 VINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 392 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 393 KELQDIIAILG 403 >gi|183206570|gb|ACC54483.1| ATP synthase beta subunit [Jasione heldreichii] Length = 488 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 160/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 209 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIITILG 399 >gi|260814835|ref|XP_002602119.1| hypothetical protein BRAFLDRAFT_125760 [Branchiostoma floridae] gi|229287425|gb|EEN58131.1| hypothetical protein BRAFLDRAFT_125760 [Branchiostoma floridae] Length = 1164 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 153/306 (50%), Gaps = 18/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG+P+D + + ++ I P + + F+TGI+V+D+ P G Sbjct: 115 GRIMNVLGEPVDNQGEI-NAEQTLPIHRNAPAFKDLETKPSIFETGIKVVDLLAPYRRGG 173 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V VGER RE + E+ + Sbjct: 174 KIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYEEMKESGVINEK 232 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LT +T+AEYF +VLL +D+I RF + E+ Sbjct: 233 SLTDSKVALVYGQMNEPPGARMRVGLTGLTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 292 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + G+IT++ +V V D+ DP + Sbjct: 293 SALLGRMPSAVGYQPTLGTEMGSLQERI--TSTTNGSITSIQAVYVPADDLTDPAPATTF 350 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +E + + R++E +D Sbjct: 351 AHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPGIVGEEHYGTAQRVKSTLQRYKELQD 410 Query: 389 IRLIGG 394 I I G Sbjct: 411 IIAILG 416 >gi|156530139|gb|ABU75166.1| AtpB [Hannoa undulata] Length = 496 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|119350553|gb|ABL63227.1| AtpB [Stichococcus bacillaris] Length = 390 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 18/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D +G + + I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNLGPVGNKE-GLPIHRSAPAFVDLDTKLAIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ DN Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEDN 157 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 158 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 217 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ SE+ +L ERI + + G+IT++ +V V D+ DP + + Sbjct: 218 ALLGRMPSAVGYQPTLASEMGKLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEETRD 388 LD VL+R LA +G YP VDPL S S + + W E+ ++ + R++E +D Sbjct: 276 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYACAQNVKETLQRYKELQD 334 Query: 389 IRLIGG 394 I I G Sbjct: 335 IIAILG 340 >gi|30265987|gb|AAM33458.1| ATP synthase beta subunit [Coleochaete sp. 489a1] Length = 388 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 162/311 (52%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D S + + + PA + + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---ELGPVDTSKVSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 DNL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INSDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKKTLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|307343754|emb|CBJ19294.1| atpD synthase beta subunit [Micromonospora sp. SR6] Length = 320 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/256 (34%), Positives = 143/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R ++ F + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVANNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + + ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|282878923|ref|ZP_06287687.1| ATP synthase F1, beta subunit [Prevotella buccalis ATCC 35310] gi|281298922|gb|EFA91327.1| ATP synthase F1, beta subunit [Prevotella buccalis ATCC 35310] Length = 509 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 42/331 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+ IDG ++L K D S I + P + ++ TGI+VID+ P G Sbjct: 95 GRMMNVVGQAIDGMEALTK-DNSYPIHREPPKFEDLSTHKEMLATGIKVIDLLEPYMKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212 +IG+F G+G+GK+ L+ + + + VGER RE + I D + GD Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMIESGVIKYGD 213 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG-- 249 +K++ +V +E P R L+ +T+AE F KG Sbjct: 214 KFRKAMDEGKWDLSLVDPEALKQSQATLVYGQMNEPPGARASVALSGLTVAEQFRDKGVA 273 Query: 250 -----DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + ++ Sbjct: 274 GQGEHADIMFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGVMQERI--TSTKR 331 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD L+R + E G YP VDPL S SR+ D Sbjct: 332 GSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPL 391 Query: 365 WSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + + ++ R++E +DI I G Sbjct: 392 IVGKEHYECAQRVKQILQRYQELQDIIAILG 422 >gi|237714625|ref|ZP_04545106.1| F0F1 ATP synthase subunit beta [Bacteroides sp. D1] gi|262406490|ref|ZP_06083039.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_22] gi|294646118|ref|ZP_06723781.1| ATP synthase F1, beta subunit [Bacteroides ovatus SD CC 2a] gi|294808287|ref|ZP_06767045.1| ATP synthase F1, beta subunit [Bacteroides xylanisolvens SD CC 1b] gi|298481151|ref|ZP_06999345.1| ATP synthase F1, beta subunit [Bacteroides sp. D22] gi|229445394|gb|EEO51185.1| F0F1 ATP synthase subunit beta [Bacteroides sp. D1] gi|262355193|gb|EEZ04284.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_22] gi|292638562|gb|EFF56917.1| ATP synthase F1, beta subunit [Bacteroides ovatus SD CC 2a] gi|294444506|gb|EFG13215.1| ATP synthase F1, beta subunit [Bacteroides xylanisolvens SD CC 1b] gi|298272725|gb|EFI14292.1| ATP synthase F1, beta subunit [Bacteroides sp. D22] Length = 505 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + D + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKGLNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYAKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ K+S+ ++ +E P R L+ +T+AE F G Sbjct: 210 GEAFKESMEKGHWDLSKVDYNELEKSQVSLIFGQMNEPPGARASVALSGLTVAESFRDAG 269 Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + K Sbjct: 270 KEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTRK 327 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + S LD VL+R + E G YP VDPLAS SR+ D Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILDPH 387 Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389 E + + ++ R +E +DI Sbjct: 388 IVGQEHYDIAQRVKQILQRNKELQDI 413 >gi|183206628|gb|ACC54512.1| ATP synthase beta subunit [Legousia falcata] Length = 462 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 68 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 124 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 125 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 183 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 184 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 243 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 244 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 301 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 302 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRLVSDEHYKTAQSVKQTLQR 361 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 362 YKELQDIITILG 373 >gi|170294005|gb|ACB13096.1| ATP synthase beta subunit [Cladophora sp. CHR505640] Length = 366 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+P+DG + + S+ I P ++ F+TGI+V+D+ P G Sbjct: 21 LGRIFNVVGQPVDGLEDAAHEN-SLPIHRSAPAFVDLDTKSSIFETGIKVVDLLAPYRRG 79 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L+ + A++ V + ER RE + E+ Sbjct: 80 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVINE 138 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 139 NNFSESKVAXVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFTQAGSE 198 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 199 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKQGSITSIQAVYVPADDLTDPAPATT 256 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV--SSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + R++E Sbjct: 257 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYTCAQNVKETLQRYKEL 315 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 316 QDIIAILG 323 >gi|15921726|ref|NP_377395.1| V-type ATP synthase subunit B [Sulfolobus tokodaii str. 7] gi|21542308|sp|Q971B6|VATB_SULTO RecName: Full=V-type ATP synthase beta chain; AltName: Full=Sul-ATPase beta chain; AltName: Full=V-ATPase subunit B gi|15622513|dbj|BAB66504.1| 465aa long membrane-associated ATPase beta subunit [Sulfolobus tokodaii str. 7] Length = 465 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/322 (30%), Positives = 166/322 (51%), Gaps = 20/322 (6%) Query: 84 GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE 142 G V GR + S GR+ N LG+P+D + G+ + PA R+ E Sbjct: 71 GSKVRFLGRGLEVKISEEMLGRIFNPLGEPLDNGPPVIGGEKRNINGDPINPA-TREYPE 129 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVG 196 + +TGI ID L GQ++ +F+GSG+ +TL + A+ V+ + +G Sbjct: 130 EFIQTGISAIDGLNSLLRGQKLPIFSGSGLPANTLAAQIAKQATVRGEESNFAVVFAAIG 189 Query: 197 ERGREV---REFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NV 252 R E R+F E+ N + + V +++ P L+ + P TA+T+AEY + + D +V Sbjct: 190 VRYDEALFFRKFFEETGAIN--RVAMFVTLANDPPSLKILTPKTALTLAEYLAFEKDMHV 247 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 L IL +T + ++RE++ + E+P GYP ++++L + ER G +KG+IT + Sbjct: 248 LAILIDMTNYCEALRELSASREEVPGRGGYPGYMYTDLATIYERAGKVIGKKGSITQMPI 307 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSAD 368 + + D+ PI D I +G IVL+RSL +G YPP++ L S+SRL + + D Sbjct: 308 LTMPNDDMTHPIPDLTGYITEGQIVLDRSLFNKGIYPPINVLMSLSRLMKDGIGEGKTRD 367 Query: 369 EKKLVSSLTHLIHRFEETRDIR 390 + K +S+ L + +DIR Sbjct: 368 DHKDLSN--QLFAAYARAQDIR 387 >gi|183206644|gb|ACC54520.1| ATP synthase beta subunit [Rhigiophyllum squarrosum] Length = 480 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 201 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 202 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 261 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 319 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 379 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 380 YKELQDIITILG 391 >gi|171191283|gb|ACB45109.1| AtpB [Simarouba berteroana] Length = 495 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 217 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 396 KELQDIIAILG 406 >gi|139390159|ref|YP_001123732.1| ATP synthase CF1 beta subunit [Lobularia maritima] gi|190358677|sp|A4QLK1|ATPB_LOBMA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134286936|dbj|BAF50556.1| ATPase beta subunit [Lobularia maritima] Length = 498 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 110/363 (30%), Positives = 171/363 (47%), Gaps = 25/363 (6%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + E + G V G + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAIAMSATEGLKRGMDVIDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 + N LG+P+D + G S I P + F+TGI+V+D+ P G +I Sbjct: 110 IFNVLGEPVDNLGPVDTGTTS-PIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 168 Query: 165 GVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DNLK 215 G+F G+G+GK+ L+ + +S+ G G RE + Y+ +NL Sbjct: 169 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENLA 228 Query: 216 KSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATN 272 +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 229 ESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSAL 288 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + L Sbjct: 289 LGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFAHL 346 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRL 391 D VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 347 DATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIA 406 Query: 392 IGG 394 I G Sbjct: 407 ILG 409 >gi|7708149|emb|CAB90103.1| ATP synthase beta subunit [Annona muricata] Length = 403 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+PID +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 10 ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 66 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 67 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESG 125 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF G NVLL +D+I RF Sbjct: 126 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQNVLLFIDNIFRFVQ 185 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 186 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 243 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + A+ + + R+ Sbjct: 244 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGAEHYETAQRVKQTSQRY 303 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 304 KELQDIIAILG 314 >gi|300113694|ref|YP_003760269.1| H(+)-transporting two-sector ATPase [Nitrosococcus watsonii C-113] gi|299539631|gb|ADJ27948.1| H(+)-transporting two-sector ATPase [Nitrosococcus watsonii C-113] Length = 479 Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 110/372 (29%), Positives = 182/372 (48%), Gaps = 27/372 (7%) Query: 44 CLGDFVV---HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP--- 97 G+ VV H+G+ + GQVI + ++V V + E DL W RF P Sbjct: 26 AFGERVVIKDHRGQRRN--GQVIFTSGEVVL---VQVFEGTDDLDLERTWVRFLEEPFEI 80 Query: 98 --SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 S+ GR+ + +G P+D L L + + R ++ +TGI ID Sbjct: 81 PLSSEVLGRIFDGVGGPLDDRPPL-IASLKRNVNGAPVNPVARAYPQEFIQTGIAAIDGL 139 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDY 209 L GQ++ +F+GSG+ + L + R + V+ + +G + R F E++ Sbjct: 140 NSLVRGQKLPIFSGSGLPHNRLAAQIVRQAKLLGEETRFVVVFAAMGVTYGDARFFQEEF 199 Query: 210 LGDNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 + VV+ + +D+ PI R + P A+T AEY + + D +VL+++ +T +A ++R Sbjct: 200 ESSGVLGDVVMYLNLADDPPIKRLLLPRAALTCAEYLAFEQDLHVLVVMTDMTHYAEALR 259 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E+AT G++P +GYP ++S+L + ER G + +G+IT V V + D+ PI D Sbjct: 260 EVATAKGDVPSRKGYPGYLYSDLAEIYERAGRIKDRRGSITMVPVVSMPSDDITHPIPDL 319 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHR 382 I +G IVL+R L +G YPPVD S+SRL + D ++ S L + Sbjct: 320 TGYITEGQIVLSRELHHQGIYPPVDIPPSLSRLMKDGIGKNSTREDHPRVASQLYAAYAK 379 Query: 383 FEETRDIRLIGG 394 E R++ I G Sbjct: 380 ALEVRNLASIIG 391 >gi|183206600|gb|ACC54498.1| ATP synthase beta subunit [Prismatocarpus sessilis] Length = 481 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 210 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 211 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 270 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 271 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 328 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 329 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 388 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 389 YKELQDIITILG 400 >gi|108796901|ref|YP_636199.1| CF1 beta subunit of ATP synthase [Pseudendoclonium akinetum] gi|118573722|sp|Q3ZJ68|ATPB_PSEAK RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|56159599|gb|AAV80623.1| CF1 beta subunit of ATP synthase [Pseudendoclonium akinetum] Length = 481 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 159/306 (51%), Gaps = 18/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+DG +++ + S+ I K P ++ F+TGI+V+D+ P G Sbjct: 99 GRIFNVLGEPVDGLEAVDSKE-SLPIHRKAPAFVDLDTKLAIFETGIKVVDLLAPYRRGG 157 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 158 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIQEKN 217 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 218 MSASKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 277 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 278 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 335 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388 LD VL+R LA +G YP VDPL S S + + W E+ ++ + R++E +D Sbjct: 336 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYSCAQNVKETLQRYKELQD 394 Query: 389 IRLIGG 394 I I G Sbjct: 395 IIAILG 400 >gi|156530181|gb|ABU75187.1| AtpB [Simaba glabra] Length = 498 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|71032549|ref|XP_765916.1| ATP synthase F1 subunit beta [Theileria parva strain Muguga] gi|68352873|gb|EAN33633.1| ATP synthase F1, beta chain, putative [Theileria parva] Length = 583 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 161/317 (50%), Gaps = 28/317 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G IDG + K + + I P +++ E TGI+V+D+ P G Sbjct: 185 LGRIMNVTGDAIDGFGPI-KSEHHLPIHRPAPSFEDQKSDEALLITGIKVVDLLAPYAKG 243 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK----VIISLVGERGREVREFIEDYL------- 210 +IG+F G+G+GK T+L M ++ +K I + VGER RE E + L Sbjct: 244 GKIGLFGGAGVGK-TVLIMELINNVANKHGGYSIFAGVGERTREGNELYHEMLSTGVIKR 302 Query: 211 -------GDNL----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDS 258 GD K+ +V +E P R LT +T+AEYF + +VLL +D+ Sbjct: 303 TIKPNGKGDEADFTGSKASLVYGQMNEPPGARARVALTGLTVAEYFRDEQNQDVLLFIDN 362 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D Sbjct: 363 IFRFTQAGSEVSALLGRIPSAVGYQPTLATDLGSLQERI--TTTKKGSITSVQAIYVPAD 420 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLT 377 + DP + + LD VL+R +AE G YP VDPL S SR+ + + V+ ++ Sbjct: 421 DITDPAPATTFTHLDATTVLSRQIAELGIYPAVDPLDSTSRMLSSHIVGERQYNVARAVQ 480 Query: 378 HLIHRFEETRDIRLIGG 394 ++ ++ +DI I G Sbjct: 481 KILQDYKSLQDIIAILG 497 >gi|183206616|gb|ACC54506.1| ATP synthase beta subunit [Wahlenbergia angustifolia] Length = 479 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 200 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 201 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 260 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 261 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 318 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 319 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 378 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 379 YKELQDIITILG 390 >gi|3893824|gb|AAD03394.1| ATPase beta subunit [Nicotiana sylvestris] Length = 553 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+IN +G+ ID + K D + I + P + + ++ TGI+V+D+ P Sbjct: 161 ATLGRIINVIGEAIDERGDI-KTDHYLPIHREAPSFVEQATEQQILVTGIKVVDLLAPYQ 219 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED--- 208 G +IG+F G+G+GK+ L+ + A++ V VGER E R+ IE Sbjct: 220 KGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAG-VGERTPEGNDLYRQMIESGVI 278 Query: 209 YLGDNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 LGDN K +V +E P R LT +T+AE+F ++G +VLL +D+I RF + Sbjct: 279 NLGDNQGESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQA 338 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ + L L +RI + +KG+IT+V ++ V D+ DP Sbjct: 339 NSEVSALLGRIPSAVGYQPTLPTHLGGLQQRI--TTTKKGSITSVQAIYVPADDLTDPAP 396 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R ++E G YP VDPL S SR L+ D + ++ ++ Sbjct: 397 ATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEDHYNTARGVQKVLQNYK 456 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 457 NLQDIIAILG 466 >gi|307343652|emb|CBJ19243.1| atpD synthase beta subunit [Micromonospora pattaloongensis] Length = 302 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 143/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGRE 201 +TGI+V+D+ P G +IG+F G+G+GK+ L+ M R ++ F + + VGER RE Sbjct: 1 LETGIKVLDLLAPYVKGGKIGLFGGAGVGKTVLIQEMIIRVANNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + ++K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIEKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPSTTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEYVGAEHYAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|303234562|ref|ZP_07321199.1| ATP synthase ab C-terminal domain protein [Finegoldia magna BVS033A4] gi|302494396|gb|EFL54165.1| ATP synthase ab C-terminal domain protein [Finegoldia magna BVS033A4] Length = 458 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 112/377 (29%), Positives = 185/377 (49%), Gaps = 35/377 (9%) Query: 44 CLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99 G+ V + SD +G+V+ IN D V I G +S + + F F I+ S Sbjct: 25 SFGEVVEVKSSASDKSMVGKVVNINDDTVTIQVFGDSTGMSTQNTKVRFTQRPFEIALSE 84 Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR N +G+PID GD K + + ++R +TGI ID Sbjct: 85 DILGRKFNGIGQPIDDGGDIYAAK---RYNVNGRAINPVSRVYPRDFIQTGISSIDCLMT 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS--------DCFDKVIISLVGERGREVREFIEDY 209 L GQ++ VF+GSG+ + L + R D F ++ +G + E R F ED Sbjct: 142 LIRGQKLPVFSGSGMSHNRLAAQIVRQAKIKGANEDNF-AIVFGAIGVKHDEAR-FFEDT 199 Query: 210 LGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266 + L + V +D+S + R + P A+T AEY + K +VL+I+ +T +A ++ Sbjct: 200 FRQSGVLNNVCMFVNYADDSIMERIITPRAALTAAEYLAFEKNYHVLVIITDLTSYAEAL 259 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 RE+++ E+P +GYP ++S+L L ER G + +G++T + + + D+ PI D Sbjct: 260 REVSSKREEVPSRKGYPGYLYSDLASLYERAGMIKDAEGSVTLIPILTMPNDDITHPIPD 319 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADE-----KKLVSSLT 377 I +G IVL RSL ++ YPP++ L S+SRL + ++ ++ +L SS + Sbjct: 320 LTGYITEGQIVLERSLMQKDIYPPINVLPSLSRLMKDGIGEGYTREDHPDVSSQLFSSYS 379 Query: 378 HLIHRFEETRDIRLIGG 394 H+ +E RD+ I G Sbjct: 380 HV----QEVRDLAQIIG 392 >gi|156530183|gb|ABU75188.1| AtpB [Simaba cedron] Length = 479 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|183206618|gb|ACC54507.1| ATP synthase beta subunit [Siphocodon spartioides] Length = 443 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 59 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 115 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 116 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 174 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 175 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 234 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 235 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 292 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 293 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 352 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 353 YKELQDIITILG 364 >gi|56758584|gb|AAW27432.1| SJCHGC09424 protein [Schistosoma japonicum] Length = 514 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/284 (33%), Positives = 156/284 (54%), Gaps = 27/284 (9%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N +G+PID +G + ++MS + P ++ ++ +TGI+V+D+ P Sbjct: 131 GRIMNVIGEPIDE-----RGPIKTKMMSGIHQDAPNFIDMSTEQEILETGIKVVDLLAPY 185 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------I 206 G +IG+F G+G+GK+ L+ + AR+ V VGER RE + + Sbjct: 186 VKGGKIGLFGGAGVGKTVLIMELINNIARAHGGYSVFAG-VGERTREGNDLYHEMITTGV 244 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 D G+N K S+V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 245 IDLKGNNSKVSLVY-GQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFVDNIFRFTQA 303 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP Sbjct: 304 GSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TSTKKGSITSVQAIYVPADDLTDPAP 361 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADE 369 ++R + VL+R++AE G YP VDPL S SR+ D +E Sbjct: 362 ATLRP-FRCNPVLSRAIAELGIYPAVDPLDSNSRILDPNIVGEE 404 >gi|171191275|gb|ACB45105.1| AtpB [Simaba cuneata] Length = 495 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 217 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 396 KELQDIIAILG 406 >gi|262273112|ref|ZP_06050929.1| ATP synthase beta chain [Grimontia hollisae CIP 101886] gi|262222868|gb|EEY74176.1| ATP synthase beta chain [Grimontia hollisae CIP 101886] Length = 467 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 94/305 (30%), Positives = 155/305 (50%), Gaps = 15/305 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG ID +G+ + I + P ++ + +TG++VID+ P G Sbjct: 85 LGRIMNVLGDAIDERGDIGEKE-RYSIHREAPSYEDQSNATELLETGVKVIDLVCPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYYEMQEAGVVNVE 203 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 204 NPAESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIYRYTLAGTEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDLTDPSPATTFA 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD +VL+R++A G YP +DPL S SR D E V+ + ++ R++E +DI Sbjct: 322 HLDATVVLSRNIAALGLYPAIDPLDSTSRQLDPLVIGQEHYDVARGVQSVLQRYKELKDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|33241040|ref|NP_875982.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|81835797|sp|Q7VA76|ATPB_PROMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|33238569|gb|AAQ00635.1| ATP synthase beta subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 488 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 160/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + K + I + P + + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPV-KTKTTSPIHREAPKLTDLETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L +S V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 ADDLTQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + + DE + ++ + R++E Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|315301530|ref|ZP_07872657.1| ATP synthase F1, beta subunit [Listeria ivanovii FSL F6-596] gi|313630100|gb|EFR98106.1| ATP synthase F1, beta subunit [Listeria ivanovii FSL F6-596] Length = 456 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/354 (29%), Positives = 176/354 (49%), Gaps = 21/354 (5%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGE--EISLGDLVFHWGR-FRISPSACWCG 103 ++ HQG + Q IN + + IGE +S G +V + G + G Sbjct: 33 EYKTHQGTYLAEVVQHTGINT----VSAIAIGEVSGLSRGTIVVNLGHPIEVPVGEKVLG 88 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R++N GK IDG ++ I P ++ TGI+VID+ P+ G + Sbjct: 89 RMLNVYGKAIDGKPE-PDTEVKWPIFRDQPKLSELDTNKEILYTGIKVIDLICPILKGGK 147 Query: 164 IGVFAGSGIGKSTLLSMFARSDCF--DKVIISLVGERGRE----VREFIEDYLGDNLKKS 217 G+F G+G+GKS L+ + + + VGER RE +E E + L ++ Sbjct: 148 TGLFGGAGVGKSVLMQELINNISMLGGNAVFTGVGERVREGIGLYKELEESGV---LPQT 204 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 VV+ +ESP +R LT +TIAEY + +VLL +D++ RF + E+++ G++ Sbjct: 205 TVVLGQMNESPGVRMRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKI 264 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P+ GY +++ E+ +RI ++ G+IT++ V + D+ +DP A + S LD I Sbjct: 265 PITGGYQSTLSKEVGDFQDRIASTKD--GSITSIQCVFLPADDIDDPSAVATFSHLDSTI 322 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 VL RS+A G +P V+PL S SR + + + L + ++ R+ E ++I Sbjct: 323 VLERSIAALGIFPAVNPLQSSSRALNPNFVGERHYNLAVQVKFILQRYMELQEI 376 >gi|169824862|ref|YP_001692473.1| V-type ATP synthase subunit B [Finegoldia magna ATCC 29328] gi|297587246|ref|ZP_06945891.1| V-type two sector ATPase, V(1) subunit B [Finegoldia magna ATCC 53516] gi|302379572|ref|ZP_07268057.1| ATP synthase ab C-terminal domain protein [Finegoldia magna ACS-171-V-Col3] gi|167831667|dbj|BAG08583.1| V-type sodium ATP synthase subunit B [Finegoldia magna ATCC 29328] gi|297575227|gb|EFH93946.1| V-type two sector ATPase, V(1) subunit B [Finegoldia magna ATCC 53516] gi|302312479|gb|EFK94475.1| ATP synthase ab C-terminal domain protein [Finegoldia magna ACS-171-V-Col3] Length = 458 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 112/377 (29%), Positives = 185/377 (49%), Gaps = 35/377 (9%) Query: 44 CLGDFVVHQGKNSDN--LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99 G+ V + SD +G+V+ IN D V I G +S + + F F I+ S Sbjct: 25 SFGEVVEVKSSASDKSMVGKVVNINDDTVTIQVFGDSTGMSTQNTKVRFTQRPFEIALSE 84 Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR N +G+PID GD K + + ++R +TGI ID Sbjct: 85 DILGRKFNGIGQPIDDGGDIYAAK---RYNVNGRAINPVSRVYPRDFIQTGISSIDCLMT 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS--------DCFDKVIISLVGERGREVREFIEDY 209 L GQ++ VF+GSG+ + L + R D F ++ +G + E R F ED Sbjct: 142 LIRGQKLPVFSGSGMSHNRLAAQIVRQAKIKGANEDNF-AIVFGAIGVKHDEAR-FFEDT 199 Query: 210 LGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266 + L + V +D+S + R + P A+T AEY + K +VL+I+ +T +A ++ Sbjct: 200 FRQSGVLNNVCMFVNYADDSIMERIITPRAALTAAEYLAFEKNYHVLVIITDLTSYAEAL 259 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 RE+++ E+P +GYP ++S+L L ER G + +G++T + + + D+ PI D Sbjct: 260 REVSSKREEVPSRKGYPGYLYSDLASLYERAGMIKDAEGSVTLIPILTMPNDDITHPIPD 319 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADE-----KKLVSSLT 377 I +G IVL RSL ++ YPP++ L S+SRL + ++ ++ +L SS + Sbjct: 320 LTGYITEGQIVLERSLMQKDIYPPINVLPSLSRLMKDGIGEGYTREDHPDVSSQLFSSYS 379 Query: 378 HLIHRFEETRDIRLIGG 394 H+ +E RD+ I G Sbjct: 380 HV----QEVRDLAQIIG 392 >gi|156530189|gb|ABU75191.1| AtpB [Simaba ferruginea] Length = 495 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 217 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 395 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 396 KELQDIIAILG 406 >gi|156530191|gb|ABU75192.1| AtpB [Simaba glabra] Length = 494 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTRATSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 216 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 395 KELQDIIAILG 405 >gi|65332618|gb|AAY42233.1| ATP synthase beta subunit [Poga oleosa] Length = 480 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 110/367 (29%), Positives = 177/367 (48%), Gaps = 33/367 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G V G + GR Sbjct: 33 KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 92 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P + F+TGI+V+D+ P G Sbjct: 93 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLPPYRRGG 149 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV-- 220 +IG+F G+G+GK+ L+ + +S+ G G RE E+ L +K+S V+ Sbjct: 150 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGIGERTRE--ENDLSMEMKESGVINE 207 Query: 221 --VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268 +A S +E P R LTA+T+AEYF + +VLL +D+I RF + E Sbjct: 208 QNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSE 267 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 268 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 325 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + +E + + + R++E + Sbjct: 326 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKZTLQRYKELQ 385 Query: 388 DIRLIGG 394 DI I G Sbjct: 386 DIIAILG 392 >gi|5758897|gb|AAD50871.1| ATP synthase beta subunit [Mayaca fluviatilis] Length = 496 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GTTLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF G +VLL +D+I RF Sbjct: 221 VINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|67523719|ref|XP_659919.1| ATPB_NEUCR ATP synthase beta chain, mitochondrial precursor [Aspergillus nidulans FGSC A4] gi|40745270|gb|EAA64426.1| ATPB_NEUCR ATP synthase beta chain, mitochondrial precursor [Aspergillus nidulans FGSC A4] Length = 513 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 152/305 (49%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K I ++ P + + TGI+V+D+ P G Sbjct: 125 LGRIVNVTGDPIDERGPI-KATKYAPIHAEAPEFTEQSTTAEILVTGIKVVDLLAPYARG 183 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 184 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 242 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 243 DGESKVSLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 302 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 303 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 360 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D +E + + ++ ++ +DI Sbjct: 361 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYNTATRVQQMLQEYKSLQDI 420 Query: 390 RLIGG 394 I G Sbjct: 421 IAILG 425 >gi|307343692|emb|CBJ19263.1| atpD synthase beta subunit [Micromonospora sp. GUI27] Length = 317 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 147/273 (53%), Gaps = 8/273 (2%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--S 184 I K P + + + +TGI+VID+ P G +IG+F G+G+GK+ L+ M R Sbjct: 3 IHRKAPAFADLEPKTEMLETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVAR 62 Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE + I + + K+ +V DE P R L+A+T+AE Sbjct: 63 NFGGTSVFAGVGERTREGNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAE 122 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF K VLL +D+I RF + E++T G +P A GY ++ E+ L ERI Sbjct: 123 YFRDVKKQEVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRG 182 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LA 361 + IT++ ++ V D++ DP + + LD L RS++++G YP VDPLAS SR LA Sbjct: 183 QA--ITSMQAIYVPADDYTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILA 240 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + ++ + + ++ R+++ +DI I G Sbjct: 241 PEFVGPEHFQVATEVKRILQRYKDLQDIIAILG 273 >gi|22651726|gb|AAM26935.1| ATP synthase beta subunit [Drosera adelae] Length = 487 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 18/310 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 + GR+ N LG+PID + S + + PP + F+TGI+V+D+ P Sbjct: 96 SVTLGRIFNVLGQPIDNLGPVATPTTSP--IHRSPPDFIQLETRLSIFETGIKVVDLLAP 153 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG--- 211 G + G+F G+G+GK+ L+ + +S+ VGER RE + ++ Sbjct: 154 YRRGGKTGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYKEMKESGV 213 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 214 INEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 273 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 GSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + DE + + + R++ Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGDEHYETAQQVKQTLQRYK 391 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 392 EVQDIIAILG 401 >gi|319406291|emb|CBI79928.1| ATP synthase beta chain [Bartonella sp. AR 15-3] Length = 530 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 159/312 (50%), Gaps = 21/312 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + I + P + + + TGI+VID+ P Sbjct: 136 ATLGRIMNVIGEPVDEFGPI-MATKKRSIHQEAPTYIEQSTESEILVTGIKVIDLLAPYS 194 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G ++G+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 195 KGGKVGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYYEMIESRVN 253 Query: 212 DNLKKS--------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263 + +K +V +E P R L+ +TIAE F +G +VL +D+I RF Sbjct: 254 VDPRKHDSTAGSKCALVYGQMNEPPGARARVALSGLTIAESFRDEGQDVLFFVDNIFRFT 313 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP Sbjct: 314 QAGAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKTGSITSVQAIYVPADDLTDP 371 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 + + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + ++ R Sbjct: 372 APATSFAHLDATTVLSRSIAEKGIYPAVDPLDSFSRMLDPLIVGEEHYAVACQVQTILQR 431 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 432 YKSLQDIIAILG 443 >gi|183206568|gb|ACC54482.1| ATP synthase beta subunit [Jasione laevis] Length = 479 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 160/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 200 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 201 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 260 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 261 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 318 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 319 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 378 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 379 YKELQDIITILG 390 >gi|34500024|gb|AAQ73594.1| ATP synthase beta subunit [Bisgaard Taxon 14] Length = 445 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/297 (30%), Positives = 152/297 (51%), Gaps = 7/297 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I + P + + +TGI+VID+ P Sbjct: 84 LGRIMNVLGEPIDELGPIGEEE-RWSIHRERPSYEEQSNSTELLETGIKVIDLVCPFAKR 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDNLKKSV 218 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N+ V Sbjct: 143 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKV 202 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V P ++ T +TIAE F +G +VL +D+I R+ + E++ G +P Sbjct: 203 SLVYGQMNEPPGNRLRVRTGLTIAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPS 262 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP + + LD +VL Sbjct: 263 AVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDLTDPSPATTFAHLDATVVL 320 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +R +A G YP VDP S SR D E ++ + + R+++ +DI I G Sbjct: 321 SRQIASLGIYPAVDPFDSTSRQFDPLVVGKEHYEVARGVQSTLQRYKDLKDIIAILG 377 >gi|20269400|gb|AAM17927.1| ATP synthase beta subunit [Chimaphila umbellata] Length = 482 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + + F+TGI+V+D+ Sbjct: 103 GVTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 159 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEIKES 218 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K ++ +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 219 GVINEQNIAESKVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 278 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 279 QAGSEVSALLGRIPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 336 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + DE K+ + + R Sbjct: 337 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRRIVGDEHYKIAQRVKQTLQR 396 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 397 YKELQDIIAILG 408 >gi|13540884|ref|NP_110572.1| V-type ATP synthase subunit B [Thermoplasma volcanium GSS1] gi|21542309|sp|Q97CP9|VATB_THEVO RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|14324266|dbj|BAB59194.1| H+-transporting ATP synthase subunit B [Thermoplasma volcanium GSS1] Length = 460 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/318 (31%), Positives = 162/318 (50%), Gaps = 17/318 (5%) Query: 60 GQVI--RINLDIVYI--CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ R L IV I GIG E + + F R+ S GRV N +G+PIDG Sbjct: 43 GQVLDTRKGLAIVQIFGATTGIGTEGT--RVKFRGETARLPISEDMLGRVFNGIGEPIDG 100 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + + MEI S +R+ + +TGI ID L GQ++ +F+GSG+ + Sbjct: 101 GPEILAKE-RMEITSNAINPYSREEPSEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHN 159 Query: 176 TLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 L + AR S+ F V+ +G E F + L +SV+ + S + Sbjct: 160 QLAAQIARQAKVLDSSENF-AVVFGAMGITSEEANYFTNQFRETGALSRSVMFLNLSSDP 218 Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 + R + P A+T AEY + K ++L+IL +T + ++REI++ E+P RGYP + Sbjct: 219 SMERIILPRIALTTAEYLAFQKEMHILVILTDMTNYCEALREISSAREEVPGRRGYPGYM 278 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L + ER G + G+IT + + + GD+ P+ D I +G +V++R L +G Sbjct: 279 YTDLSTIYERAGKLKGNNGSITQIPILTMPGDDITHPVPDLTGYITEGQVVVSRDLNRKG 338 Query: 347 RYPPVDPLASVSRLADKA 364 YP +D L S+SRL ++ Sbjct: 339 IYPGIDVLLSLSRLMNQG 356 >gi|183206626|gb|ACC54511.1| ATP synthase beta subunit [Githopsis diffusa] Length = 479 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D ++ I P ++ F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPID---NLGPVDTRITAPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 200 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 201 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 260 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 261 QAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 318 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + S D + S+ + R Sbjct: 319 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDDHYETAQSVKQTLQR 378 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 379 YKELQDIITILG 390 >gi|11465583|ref|NP_045025.1| ATP synthase CF1 beta subunit [Cyanidium caldarium] gi|14547924|sp|Q9TM41|ATPB_CYACA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|6466439|gb|AAF13020.1|AF022186_194 unknown [Cyanidium caldarium] Length = 490 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 151/305 (49%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+PID + D + I P + F+TGI+V+D+ P G Sbjct: 105 GRIFNVLGEPIDEKGPVISND-KLPIHRPAPKFTQLETKPSIFETGIKVVDLLAPYRRGG 163 Query: 163 RIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGD------- 212 +IG+F G+G+GK+ L+ + + VGER RE + ++ Sbjct: 164 KIGLFGGAGVGKTVLIMELINNVAKAHGGVSVFGGVGERTREGNDLYQEMKESGVINEKD 223 Query: 213 -NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 NL K + +E P R LTA+T+AEYF NVLL +D+I RF + E++ Sbjct: 224 LNLSKVALCYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVS 283 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + G+IT++ +V V D+ DP + + Sbjct: 284 ALLGRMPSAVGYQPTLGTEMGALQERI--TSTLDGSITSIQAVYVPADDLTDPAPATTFA 341 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDI 389 LD VL+R+LA +G YP VDPL S S + +DE + + + R++E +DI Sbjct: 342 HLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPGIVSDEHYTTARKVKETLQRYKELQDI 401 Query: 390 RLIGG 394 I G Sbjct: 402 IAILG 406 >gi|327400215|ref|YP_004341054.1| V-type ATP synthase subunit beta [Archaeoglobus veneficus SNP6] gi|327315723|gb|AEA46339.1| V-type ATP synthase beta chain [Archaeoglobus veneficus SNP6] Length = 471 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/285 (32%), Positives = 150/285 (52%), Gaps = 15/285 (5%) Query: 84 GDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEK 143 GD+V R++ S GRV++ G PIDG + + I + + P RQ + Sbjct: 72 GDIV------RLACSKDMLGRVLSGSGDPIDGGPKIVPEERREIIGAAINP-YARQYPRE 124 Query: 144 GFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGE 197 +TGI ID L GQ++ +F+GSG+ + + AR VI + +G Sbjct: 125 FIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNDIALQVARQAKVRGEGEEFAVIFAAMGI 184 Query: 198 RGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLI 255 E +F++D+ L+++VV + +D+ I R + P A+T AE+ + + D +VL+I Sbjct: 185 TNEEAYQFMKDFERTGALERAVVFLNLADDPAIERLLTPRMALTAAEFLAYEYDLHVLVI 244 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 L +T + ++RE++ E+P RGYP ++++L + ER G KG IT + + + Sbjct: 245 LTDMTNYCEALREMSAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGTITQMPILTM 304 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 GD+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 305 PGDDITHPIPDLTGYITEGQIVLSRELHAKGIYPPIDVLPSLSRL 349 >gi|319952700|ref|YP_004163967.1| ATP synthase f1 subcomplex beta subunit [Cellulophaga algicola DSM 14237] gi|319421360|gb|ADV48469.1| ATP synthase F1 subcomplex beta subunit [Cellulophaga algicola DSM 14237] Length = 502 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 103/330 (31%), Positives = 159/330 (48%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG L K G + I + P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGLGDLPKAGKDGLPIHREAPKFEDLSTSTEVLFTGIKVIDLIEPYAKG 149 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 150 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 209 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D+ K+ V +E P R L+ +TIAEYF Sbjct: 210 DDFMHSMEEGGWDLSKVDKKVMKDSKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 269 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 270 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 327 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L Sbjct: 328 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTADI 387 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + ++ L+ R++E +DI I G Sbjct: 388 LGKEHYACAQNVKELLQRYKELQDIIAILG 417 >gi|116619604|ref|YP_821760.1| F0F1 ATP synthase subunit beta [Candidatus Solibacter usitatus Ellin6076] gi|122255867|sp|Q02BU1|ATPB_SOLUE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116222766|gb|ABJ81475.1| ATP synthase F1, beta subunit [Candidatus Solibacter usitatus Ellin6076] Length = 482 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQ--RVEKGFKTGIRVIDIFTPLC 159 GRV+N +G+P+D +G + P P+ Q R+E F+TGI+VID+ P Sbjct: 97 GRVLNVIGEPVD---EMGPVNAKKHYPIHRPAPSFEDQSTRLEM-FETGIKVIDLIEPYL 152 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVR----EFIEDYLGD 212 G +IG+F G+G+GK+ ++ + +S+ VGER RE EF E + D Sbjct: 153 RGGKIGLFGGAGVGKTVIIQELINNLAMKHGGVSVFAGVGERTREGNDLWLEFQESGVID 212 Query: 213 ----NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 K ++ E P R LT +T+AEYF + +VLL +D+I RF + Sbjct: 213 PHDYTKSKCALIYGQMTEPPGARLRVGLTGLTVAEYFRDEEHQDVLLFIDNIFRFTQAGS 272 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT+V ++ V D++ DP + Sbjct: 273 EVSALLGRMPSAVGYQPNLATEMGELQERI--TSTKNGSITSVQAIYVPADDYTDPAPAT 330 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEET 386 + LD L+R +A G YP VDPLAS SR+ D ++ + + + R+++ Sbjct: 331 AFAHLDATTNLSRDIAALGIYPAVDPLASTSRILDPHIVGEDHYATAQMVKGTLQRYKDL 390 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 391 QDIIAILG 398 >gi|307343632|emb|CBJ19233.1| atpD synthase beta subunit [Micromonospora endolithica] Length = 302 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|307343604|emb|CBJ19219.1| atpD synthase beta subunit [Micromonospora aurantiaca] Length = 302 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 94/283 (33%), Positives = 152/283 (53%), Gaps = 11/283 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFEVATEVKR 238 Query: 379 LIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQS 420 ++ R+++ +DI I G + DK VH+ I FL Q+ Sbjct: 239 ILQRYKDLQDIIAILGIEELSE--EDKITVHRARRIERFLSQN 279 >gi|154001282|gb|ABS57116.1| ATP synthase beta subunit [Araucaria cunninghamii] Length = 419 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D LG D + + + PA + + F+TGI+V+D+ Sbjct: 34 GATLGRIFNVLGEPVD---DLGPVDARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLA 90 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + V + S VGER RE + + Sbjct: 91 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 150 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 151 VIQEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + +E ++ + + R+ Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYEIAQGVKQTLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|148978361|ref|ZP_01814866.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3] gi|145962520|gb|EDK27798.1| F0F1 ATP synthase subunit beta [Vibrionales bacterium SWAT-3] Length = 467 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 153/305 (50%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 GR++N LG ID +G + + + P+ Q E +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDECGEIGAEEHYA--IHREAPSYEEQSNETALLETGVKVIDLVCPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYL 210 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVE 203 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 204 NPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + + Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPATTFA 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD +VLNR++A G YP +DPL S SR D E + + + R++E +DI Sbjct: 322 HLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQSTLQRYKELKDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|87080772|dbj|BAE79342.1| ATP synthase beta subunit [Carteria palmata] Length = 376 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + I P ++ F+TGI+V+D+ P Sbjct: 31 LGRIFNVLGEPVD---NLGPVNAEEKLPIHRLAPAFVDLDTRLSIFETGIKVVDLLAPYR 87 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 88 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 147 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V +E P R L+A+T+AEYF +VL +D+I RF + Sbjct: 148 EKNLTDS--KVALVYGQMNEPPGARMRVALSALTMAEYFRDVNKQDVLFFIDNIFRFVQA 205 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 206 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 263 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + LD VL+R+LA +G YP VDPL S S + + W EK S+ + R+ Sbjct: 264 AVTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYGCAQSVKKTLQRY 322 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 323 KELQDIIAILG 333 >gi|260590640|ref|ZP_05856098.1| ATP synthase F1, beta subunit [Prevotella veroralis F0319] gi|260537381|gb|EEX19998.1| ATP synthase F1, beta subunit [Prevotella veroralis F0319] Length = 507 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/330 (29%), Positives = 160/330 (48%), Gaps = 41/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PIDG + L K + + I + P + ++ +TGI+VID+ P G Sbjct: 95 GRMMNVIGQPIDGMEVL-KMEGAYPIHREAPKFEDLSTHKEMLQTGIKVIDLLEPYMKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212 +IG+F G+G+GK+ L+ + + + VGER RE + I D L GD Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIRYGD 213 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250 +K++ +V +E P R L+ +T+AE F G Sbjct: 214 KFRKAMEEGKWDLSLVDPEELQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273 Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + ++G Sbjct: 274 NGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKRG 331 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD L+R + E G YP VDPL S SR+ D Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPLI 391 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + + L+ ++ E +DI I G Sbjct: 392 VGKEHYECAQRVKQLLQKYNELQDIIAILG 421 >gi|170293973|gb|ACB13080.1| ATP synthase beta subunit [Codium platyclados] Length = 366 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+ +D +LG + D+ I P ++ F+TGI+V+D+ P Sbjct: 19 ATLGRIFNVLGETVD---NLGPVQADMGFAIHRSAPAFVDLDTKLAIFETGIKVVDLLAP 75 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 76 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 135 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NLK+S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 136 INEQNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 195 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ SE+ L ERI + + G+IT++ ++ V D+ DP Sbjct: 196 GSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKNGSITSIQAIYVPADDLTDPAP 253 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+RSLA +G YP VDPL S S + DE ++ + R++ Sbjct: 254 ATTFAHLDATTVLSRSLASKGIYPAVDPLDSTSTMLQPWIVGDEHYDCAQNVKQTLQRYK 313 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 314 ELQDIIAILG 323 >gi|20467397|gb|AAL27829.1| ATPase beta subunit [Pinus strobus] Length = 442 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ Sbjct: 75 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLA 131 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 132 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 190 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 191 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 250 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 251 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 308 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 309 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 367 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 368 RYKELQDIIAI----PGLD 382 >gi|227832900|ref|YP_002834607.1| ATP synthase beta chain [Corynebacterium aurimucosum ATCC 700975] gi|262182611|ref|ZP_06042032.1| F0F1 ATP synthase subunit beta [Corynebacterium aurimucosum ATCC 700975] gi|254808142|sp|C3PFR5|ATPB_CORA7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|227453916|gb|ACP32669.1| ATP synthase beta chain [Corynebacterium aurimucosum ATCC 700975] Length = 482 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D LG+ D + + PPA ++ + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-QPGLGR-DGEQWGIHREPPAFDQLEGKTEILETGIKVIDLLTPYVKG 160 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI S K K +IT++ +V V D++ DP + + LD Sbjct: 281 PSAVGYQPTLADEMGVLQERI-TSTKGK-SITSLQAVYVPADDYTDPAPATTFAHLDATT 338 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R +A +G YP V+PL S SR+ + + + ++ + ++ + +E +DI I G Sbjct: 339 ELDRGIASKGIYPAVNPLTSTSRILEPSIVGERHYEVAQRVIGILQKNKELQDIIAILG 397 >gi|197132376|gb|ACH47706.1| ATP synthase CF1 beta subunit [Geranium macrorrhizum] Length = 501 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 159/307 (51%), Gaps = 22/307 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 107 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPDFIQLDTKLSIFETGIKVVDLLA 163 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 164 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 222 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + ++ K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 223 GVINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFV 282 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 283 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 340 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + SA+ ++ + + R Sbjct: 341 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVSAEHYEIAQRVKETLQR 400 Query: 383 FEETRDI 389 ++E +DI Sbjct: 401 YKELQDI 407 >gi|237688477|ref|YP_002905096.1| ATP synthase CF1 beta subunit [Picea sitchensis] gi|237688609|ref|YP_002905226.1| ATP synthase CF1 beta subunit [Pinus gerardiana] gi|324986376|ref|YP_004276248.1| ATP synthase CF1 beta subunit [Pinus lambertiana] gi|226875305|gb|ACO89044.1| ATP synthase CF1 beta subunit [Picea sitchensis] gi|226876069|gb|ACO89325.1| ATP synthase CF1 beta subunit [Pinus gerardiana] gi|228016133|gb|ACP50970.1| ATP synthase CF1 beta subunit [Pinus sibirica] gi|228016199|gb|ACP51035.1| ATP synthase CF1 beta subunit [Pinus squamata] gi|228016260|gb|ACP51095.1| ATP synthase CF1 beta subunit [Pinus strobus] gi|228016640|gb|ACP51469.1| ATP synthase CF1 beta subunit [Pinus albicaulis] gi|228016771|gb|ACP51598.1| ATP synthase CF1 beta subunit [Pinus armandii] gi|228016895|gb|ACP51720.1| ATP synthase CF1 beta subunit [Pinus ayacahuite] gi|228017141|gb|ACP51962.1| ATP synthase CF1 beta subunit [Pinus cembra] gi|228017264|gb|ACP52083.1| ATP synthase CF1 beta subunit [Pinus flexilis] gi|228017329|gb|ACP52147.1| ATP synthase CF1 beta subunit [Pinus lambertiana] gi|228017522|gb|ACP52337.1| ATP synthase CF1 beta subunit [Pinus monticola] gi|228017585|gb|ACP52399.1| ATP synthase CF1 beta subunit [Pinus parviflora var. pentaphylla] gi|228017649|gb|ACP52462.1| ATP synthase CF1 beta subunit [Pinus peuce] gi|323514225|gb|ADX89772.1| ATP synthase CF1 beta subunit [Pinus lambertiana] Length = 492 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|183206520|gb|ACC54458.1| ATP synthase beta subunit [Triodanis perfoliata] Length = 468 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 74 GATLGRIFNVLGEPID---NLGPVDTLTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 130 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 131 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 189 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 190 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 249 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 250 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 307 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 308 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 367 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 368 YKELQDIITILG 379 >gi|258512716|ref|YP_003186150.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257479442|gb|ACV59761.1| ATP synthase F1, beta subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 467 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 164/327 (50%), Gaps = 16/327 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+ ID + + I P + + F+TGI+V+D+ P G Sbjct: 88 LGRIFNVLGETIDERGPVDAPE-RWPIHRPAPAFGDLTTKTEIFETGIKVVDLLAPYVKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L+ + + + + VGER RE + + L K+ Sbjct: 147 GKVGLFGGAGVGKTVLIQELIHNIAKEHGGYSVFAGVGERTREGNDLYHEMKESGVLDKT 206 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R L+ +T+AEYF + +VL +D+I RF + E++ G + Sbjct: 207 CMVFGQMNEPPGARLRVALSGLTLAEYFRDVEQRDVLFFIDNIFRFTQAGSEVSALLGRM 266 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +E+ +L ERI + +G+IT++ +V V D++ DP + + LD Sbjct: 267 PSAVGYQPTLATEMGQLQERI--ASTVRGSITSIQAVYVPADDYTDPAPANTFTHLDATT 324 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGGY 395 VL R +A+ G YP VDPLAS SR +E V+ + ++ R+ E +DI I G Sbjct: 325 VLERRIADMGLYPAVDPLASTSRALQPDIVGEEHYQVARGVQAVLQRYRELQDIIAILGM 384 Query: 396 RPGVD---LILDKAVHQVPIIYDFLKQ 419 D LI+ +A I +FL Q Sbjct: 385 DELTDEDRLIVSRARK----IQNFLSQ 407 >gi|124026543|ref|YP_001015658.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. NATL1A] gi|166201725|sp|A2C4I4|ATPB_PROM1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|123961611|gb|ABM76394.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. NATL1A] Length = 488 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D L K + I P + + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGDL-KNVTTSPIHRSAPSLTDLETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 ++L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 SEDLTKSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + + DE + ++ + R++E Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|29565615|ref|NP_817194.1| ATP synthase CF1 beta subunit [Pinus koraiensis] gi|75328468|sp|Q85X24|ATPB_PINKO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|29469714|gb|AAO74042.1| H+-ATPase beta subunit [Pinus koraiensis] Length = 490 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|307343700|emb|CBJ19267.1| atpD synthase beta subunit [Micromonospora sp. GUI40] Length = 317 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/273 (32%), Positives = 147/273 (53%), Gaps = 8/273 (2%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--S 184 I K P + + + +TGI+VID+ P G +IG+F G+G+GK+ L+ M R Sbjct: 3 IHRKAPAFADLEPKTEMLETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVAR 62 Query: 185 DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAE 243 + + + VGER RE + I + + K+ +V DE P R L+A+T+AE Sbjct: 63 NFGGTSVFAGVGERTREGNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAE 122 Query: 244 YFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 YF K VLL +D+I RF + E++T G +P A GY ++ E+ L ERI Sbjct: 123 YFRDVKKQEVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRG 182 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LA 361 + IT++ ++ V D++ DP + + LD L RS++++G YP VDPLAS SR LA Sbjct: 183 QA--ITSMQAIYVPADDYTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILA 240 Query: 362 DKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + ++ + + ++ R+++ +DI I G Sbjct: 241 PEFVGPEHFQVATEVKRILQRYKDLQDIIAILG 273 >gi|183206574|gb|ACC54485.1| ATP synthase beta subunit [Jasione crispa] Length = 480 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 160/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 201 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 202 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 261 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 319 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 379 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 380 YKELQDIITILG 391 >gi|170293997|gb|ACB13092.1| ATP synthase beta subunit [Uronema sp. CCAP384/2] Length = 366 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + + I P + F+TGI+V+D+ P Sbjct: 21 LGRIFNVLGEPVD---NLGPVETEQKLPIHRPAPAFTDLDTRLAIFETGIKVVDLLAPYR 77 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 78 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVIV 137 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 138 ESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 197 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 198 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 255 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + DE + + + R++E Sbjct: 256 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYGIAQKVKQTLQRYKEL 315 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 316 QDIIAILG 323 >gi|309322170|ref|YP_003934085.1| ATP synthase CF1 beta subunit [Geranium palmatum] gi|197132378|gb|ACH47707.1| ATP synthase CF1 beta subunit [Geranium palmatum] gi|300069263|gb|ADJ66384.1| ATP synthase CF1 beta subunit [Geranium palmatum] Length = 497 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 159/307 (51%), Gaps = 22/307 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 103 GATLGRIFNVLGEPID---NLGPVDTLTTSPIHRSAPDFIQLDTKLSIFETGIKVVDLLA 159 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 218 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + ++ K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 219 GVINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFV 278 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 279 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 336 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + SA+ ++ + + R Sbjct: 337 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVSAEHYEIAQRVKETLQR 396 Query: 383 FEETRDI 389 ++E +DI Sbjct: 397 YKELQDI 403 >gi|4063540|gb|AAC98328.1| ATP synthase beta subunit [Cistus x revolii] Length = 456 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 155/304 (50%), Gaps = 16/304 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G + I + P + + F+TGI+V+D+ P Sbjct: 78 GVTLGRIFNVLGEPVDNLGPVDTGT-TAPIHNSAPAFVQLETKLSIFETGIKVVDLLAPY 136 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 137 RRGGKIGLFGGAGVGKTVLIMELINNIAKSHGGVSVFGGVGERTREGNDLYMEMKESGVI 196 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 197 NEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 256 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 257 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 314 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S L + + ++ + + R++E Sbjct: 315 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGKEHYEIAQQVKQTLQRYKE 374 Query: 386 TRDI 389 +DI Sbjct: 375 LQDI 378 >gi|42559024|gb|AAS20198.1| ATP synthase beta subunit [Flagellaria indica] Length = 479 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 87 GATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 202 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 203 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 262 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 263 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 320 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE ++ + + R Sbjct: 321 APATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKETLQR 380 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 381 YKELQDIIAILG 392 >gi|259487710|tpe|CBF86592.1| TPA: ATP synthase beta chain, mitochondrial (Eurofung) [Aspergillus nidulans FGSC A4] Length = 518 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 152/305 (49%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K I ++ P + + TGI+V+D+ P G Sbjct: 130 LGRIVNVTGDPIDERGPI-KATKYAPIHAEAPEFTEQSTTAEILVTGIKVVDLLAPYARG 188 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 189 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 247 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 248 DGESKVSLVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 307 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 308 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 365 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D +E + + ++ ++ +DI Sbjct: 366 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGEEHYNTATRVQQMLQEYKSLQDI 425 Query: 390 RLIGG 394 I G Sbjct: 426 IAILG 430 >gi|183206510|gb|ACC54453.1| ATP synthase beta subunit [Platycodon grandiflorum] Length = 488 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + + G V G + GR Sbjct: 40 KGRDTLGQPIHVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDLGAPLSVPVGGATLGR 99 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P + F+TGI+V+D+ P G Sbjct: 100 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 217 FAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 276 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 334 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +DE ++ S+ + R++E +DI Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYEIAQSVKQTLQRYKELQDI 394 Query: 390 RLIGG 394 I G Sbjct: 395 ITILG 399 >gi|198464543|ref|XP_001353265.2| GA18845 [Drosophila pseudoobscura pseudoobscura] gi|198149765|gb|EAL30768.2| GA18845 [Drosophila pseudoobscura pseudoobscura] Length = 675 Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 110/345 (31%), Positives = 172/345 (49%), Gaps = 26/345 (7%) Query: 68 DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 +IV + E I G V G R++ GR++N +G PID +G++ Sbjct: 176 NIVRCVAMDATEGIKRGQKVVDTGYPIRVAVGKAVLGRILNVVGDPIDE-----RGEVKS 230 Query: 127 EIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178 E S + P + V+ TGI+VID+ P G +IG+F G+G+GK+ L+ Sbjct: 231 EYHSFIHTEAPVLTELSVKPEILVTGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIMELI 290 Query: 179 SMFARSDCFDKVIISLVGERGRE----VREFIEDY---LGDNLKKSVVVVATSDESPILR 231 + A++ V + GER RE E IE L ++ K V+V +E P R Sbjct: 291 NNIAKAHGGYSVFVG-AGERTREGNDLYHEMIESKVISLEEDTSKVVLVFGQMNEPPGAR 349 Query: 232 KMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 LT +TIAEYF G +VLL +D+I RF + E++ G +P A GY ++ +++ Sbjct: 350 SRVVLTGLTIAEYFRDIDGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLGTDM 409 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 + ERI + G+IT+V +V V D+ +DP + + LD VL+R +AE G YP Sbjct: 410 GTMQERI--TSTRNGSITSVQAVYVPADDLSDPAPAATFTHLDATTVLSRPIAELGIYPA 467 Query: 351 VDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VDPL S SR+ D +E + ++ + ++ +DI I G Sbjct: 468 VDPLDSSSRILDPDVVGEEHYNVARAVQKTLQGYKSLQDIIAILG 512 >gi|20467393|gb|AAL27827.1| ATPase beta subunit [Pinus peuce] Length = 442 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ Sbjct: 76 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLA 132 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 133 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 191 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 192 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 251 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 252 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 309 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 310 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 368 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 369 RYKELQDIIAI----PGLD 383 >gi|307343674|emb|CBJ19254.1| atpD synthase beta subunit [Micromonospora sp. GUI3] gi|307343676|emb|CBJ19255.1| atpD synthase beta subunit [Micromonospora sp. GUI8] gi|307343706|emb|CBJ19270.1| atpD synthase beta subunit [Micromonospora sp. GUI43] gi|307343726|emb|CBJ19280.1| atpD synthase beta subunit [Micromonospora sp. SG8] gi|307343748|emb|CBJ19291.1| atpD synthase beta subunit [Micromonospora sp. SR1] Length = 302 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGNEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|307343608|emb|CBJ19221.1| atpD synthase beta subunit [Micromonospora carbonacea] Length = 298 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K +VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQDVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|183206656|gb|ACC54526.1| ATP synthase beta subunit [Petromarula pinnata] Length = 498 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + + VGER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFGGVGERTREGNDLYKEMKDSG 220 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIITILG 409 >gi|15425592|emb|CAC60263.1| ATP synthase beta subunit [Pseudonemacladus oppositifolius] Length = 482 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTAPIHRSAPAFIELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 217 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 218 GVIKEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 395 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 396 YKELQDIITILG 407 >gi|159040926|ref|YP_001540178.1| V-type ATP synthase subunit B [Caldivirga maquilingensis IC-167] gi|157919761|gb|ABW01188.1| H+transporting two-sector ATPase alpha/beta subunit central region [Caldivirga maquilingensis IC-167] Length = 477 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 103/363 (28%), Positives = 181/363 (49%), Gaps = 18/363 (4%) Query: 43 VCLGDFVVHQGKNSD-NLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSA 99 + G+ V G + + L QVI + D I + +G S + F+ R+ S Sbjct: 32 ISYGEMGVVTGPDGEPRLIQVIEVGPDYAIAQVLTGTLGLPASGSTVRFYGTTLRLPVSE 91 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+I+ G P D S+ + +++ + R E+ +TG+ ID + Sbjct: 92 DLLGRIISGRGVPRD-SLSMPPAEDFLDVNGEPLNPYARDYPEEPIETGVSAIDGLYTMV 150 Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN 213 GQ++ +F+G+G+ + L + AR S+ ++ + +G R E FI+++ Sbjct: 151 RGQKLPIFSGTGLPHNMLAAQVARQATVRGSEEEFAIVFAAIGLRTEEALFFIDEFRRTG 210 Query: 214 LKKSVVVVATSDESPIL-RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271 + +V+V PI R + P A+TIAEY + + D +VL+IL + +A ++RE+++ Sbjct: 211 ALRRLVLVMNLASDPIAERILTPRVALTIAEYLAWQRDYHVLVILSDMLNYAEALRELSS 270 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 GELP RGYP ++++L + ER G + KG++T + + D+ P+ D I Sbjct: 271 AKGELPGRRGYPGYMYTDLASIFERAGRARGRKGSVTQFPILTMPHDDITHPVPDLTGYI 330 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA----WSADEKKLVSSLTHLIHRFEETR 387 +G +VL+RS+ +G YPP D L S+SRL A + D+ K V++ LI + Sbjct: 331 TEGQLVLSRSMWGKGIYPPFDVLMSLSRLMKDAVGEGKTRDDHKYVAN--QLISAYSRAL 388 Query: 388 DIR 390 D+R Sbjct: 389 DVR 391 >gi|193212719|ref|YP_001998672.1| F0F1 ATP synthase subunit beta [Chlorobaculum parvum NCIB 8327] gi|193086196|gb|ACF11472.1| alternate F1F0 ATPase, F1 subunit beta [Chlorobaculum parvum NCIB 8327] Length = 508 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 95/293 (32%), Positives = 155/293 (52%), Gaps = 11/293 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQ 162 R+ + G ID L +++ + PP ++R+ + + F+TGI++ID+ PL G Sbjct: 108 RMFDVFGNAIDRGGPLS--NVTWRSVHGAPPPLSRRSTKAEVFQTGIKIIDLLVPLERGG 165 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 + G+F G+G+GK+ LL+ + + +S+ +GER RE E D L V Sbjct: 166 KAGLFGGAGVGKTVLLTEMIHNMVSTESGVSIFCGIGERCREGEELYRDMSEAGVLDNMV 225 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L A+T+AEYF +VLL++D+I RF + EI+ +G++P Sbjct: 226 MVFGQMNEPPGSRFRVGLAALTMAEYFRDDLHQDVLLLIDNIFRFIQAGSEISGMTGQMP 285 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +EL L ERI + G IT++ +V V D+ DP A S L +V Sbjct: 286 SRLGYQPTIGTELSALEERI--ANTGTGAITSIQAVYVPADDFTDPAAVHTFSHLSASLV 343 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R A EG YP VDPL+S S++A ++ L + ++ ++ E +DI Sbjct: 344 LSRKRAGEGFYPAVDPLSSGSKMAGESIVGRRHYDLAREVRRVLAQYAELKDI 396 >gi|113910776|gb|ABI48120.1| ATPase beta subunit [Trichocolea tomentella] Length = 453 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 64 ATLGRIFNVLGEPVD---NLGPVDASTSFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 120 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 121 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 180 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 181 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 240 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 241 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 298 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 299 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 357 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 358 KELQDIIAISG 368 >gi|325970977|ref|YP_004247168.1| V-type ATP synthase beta chain [Spirochaeta sp. Buddy] gi|324026215|gb|ADY12974.1| V-type ATP synthase beta chain [Spirochaeta sp. Buddy] Length = 473 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/274 (31%), Positives = 143/274 (52%), Gaps = 9/274 (3%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 +S S GRV+N LGK DG ++ G ++ + R+ +TGI VID Sbjct: 96 LSVSEQMLGRVMNGLGKSRDGSGTV-HGFAERDVNGEPINPTAREYPRDFIQTGISVIDG 154 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK------VIISLVGERGREVREFIED 208 T L GQ++ +F+G+G+ + L + AR ++ + +G + R FI+ Sbjct: 155 MTTLIQGQKLPIFSGNGMDHNQLAAQIARQAKVRGSSGDFCIVFAAMGVKYDVARFFIDS 214 Query: 209 YLGDNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266 + + +V + ++ +D+ I R + P TA+T+AEY + KG VL+I+ +T + S+ Sbjct: 215 FEETGVTDNVALFLSLADDPSIERTITPKTALTLAEYLAFDKGKQVLVIMTDMTNYCESL 274 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REI T GE+P +GYP ++S L L ER G G+IT + + + D+ + P+ D Sbjct: 275 REIGTMRGEIPSRKGYPGYLYSNLAELYERSGKISGRSGSITQLPILSMPNDDISHPVPD 334 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 I +G IV R + G YPP++ L S+SRL Sbjct: 335 LTGYITEGQIVFERGMQARGIYPPINCLPSLSRL 368 >gi|307343670|emb|CBJ19252.1| atpD synthase beta subunit [Polymorphospora rubra] Length = 301 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 142/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR-SDCFDKV-IISLVGERGRE 201 +TGI+V+D+ P G +IG+F G+G+GK+ L+ M R ++ F + + VGER RE Sbjct: 1 LETGIKVLDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVANNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVINKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E V+S + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHYAVASEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|119350521|gb|ABL63211.1| AtpB [Neochloris vigensis] Length = 390 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ +D + + ++ I P ++ F+TGI+V+D+ P G Sbjct: 38 GRIFNVLGEAVDNMGPVQNME-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 96 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 97 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 156 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + E Sbjct: 157 LADS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAE 214 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 215 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 272 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W EK + S+ + R++E Sbjct: 273 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEKHYECAQSVKRTLQRYKEL 331 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 332 QDIIAILG 339 >gi|183206664|gb|ACC54530.1| ATP synthase beta subunit [Campanula cretica] Length = 498 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRVVSDEHYKTAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|113910954|gb|ABI48209.1| ATPase beta subunit [Cephalotaxus harringtonia] Length = 467 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 108/366 (29%), Positives = 177/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K++D GQ IR+ ++ V + + + G V G + GR Sbjct: 24 KDNDTTGQPIRVTCEVQQLLGNNKVRAVAMSATDGLMRGMRVIDTGAPLSVPVGETTLGR 83 Query: 105 VINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D LG G L+ + + PA + + F+TGI+V+D+ P G Sbjct: 84 IFNVLGEPVD---DLGPVGALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGG 140 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 199 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF NVLL +D+I RF + E+ Sbjct: 200 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 259 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 260 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 317 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + + +E + + + R++E +D Sbjct: 318 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQD 377 Query: 389 IRLIGG 394 I I G Sbjct: 378 IIAILG 383 >gi|21684893|emb|CAD11573.1| ATP synthase beta subunit [Flagellaria indica] Length = 491 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 213 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 214 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 273 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 331 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE ++ + + R Sbjct: 332 APATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKETLQR 391 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 392 YKELQDIIAILG 403 >gi|59713171|ref|YP_205947.1| F0F1 ATP synthase subunit beta [Vibrio fischeri ES114] gi|81310858|sp|Q5E1N7|ATPB_VIBF1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|59481272|gb|AAW87059.1| ATP synthase F1, beta subunit [Vibrio fischeri ES114] Length = 467 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 23/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N LG ID GD+ E I + P + + +TG++VID+ P Sbjct: 86 GRIMNVLGDAIDE-----CGDIDAEEHYAIHREAPSYEEQSNSTELLETGVKVIDLVCPF 140 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGD 212 G +IG+F G+G+GK+ + + +S+ VGER RE +F +++ Sbjct: 141 AKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVV 200 Query: 213 NLKKS-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 N++K +V +E P R LT +T+AE F +G +VLL +D+I R+ + Sbjct: 201 NIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGT 260 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + Sbjct: 261 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPAT 318 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD +VLNR++A G YP +DPL S SR D E + + + R++E Sbjct: 319 TFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQSTLQRYKEL 378 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 379 KDIIAILG 386 >gi|119386525|ref|YP_917580.1| F0F1 ATP synthase subunit beta [Paracoccus denitrificans PD1222] gi|190358696|sp|A1B8P0|ATPB_PARDP RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|119377120|gb|ABL71884.1| ATP synthase F1 subcomplex beta subunit [Paracoccus denitrificans PD1222] Length = 474 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 95/310 (30%), Positives = 161/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + + + I + P + + TGI+VID+ P Sbjct: 84 ATLGRILNVVGEPVDEGGPV-EATQTRAIHQQAPDFAAQATASEILVTGIKVIDLLAPYS 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG--- 211 G +IG+F G+G+GK+ L+ + KV + + VGER RE + + + Sbjct: 143 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMVESGV 200 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 D+L KS V V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 201 IKPDDLSKSQVALVYGQMNEPPGARMRVALTGLTVAEQFRDATGTDVLFFVDNIFRFTQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V D+ DP Sbjct: 261 GSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R+++E G YP VDPL S SR+ D A +E V+ + ++ +++ Sbjct: 319 ATTFAHLDATTVLSRAISELGIYPAVDPLDSNSRILDPAVVGEEHYQVARDVQGILQKYK 378 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 379 SLQDIIAILG 388 >gi|14718056|gb|AAK72769.1| ATP synthase beta subunit [Flagellaria indica] Length = 481 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 96 ATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 152 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 211 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 212 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE ++ + + R+ Sbjct: 330 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKETLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|307343712|emb|CBJ19273.1| atpD synthase beta subunit [Micromonospora sp. CR18] Length = 302 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|240102205|ref|YP_002958513.1| V-type ATP synthase subunit B [Thermococcus gammatolerans EJ3] gi|259710377|sp|C5A337|VATB_THEGJ RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|239909758|gb|ACS32649.1| Archaeal/vacuolar-type H+-ATPase, subunit B (atpB) [Thermococcus gammatolerans EJ3] Length = 463 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 104/351 (29%), Positives = 176/351 (50%), Gaps = 22/351 (6%) Query: 27 SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81 S+++ +Y + + + V G+ V + GQV+ R NL IV + +I Sbjct: 7 STVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVFEGTRDLDI 66 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138 + F ++ S GR+ N +GKPIDG + + D+ ++ V A R Sbjct: 67 KTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 126 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191 ++ TGI ID L GQ++ +F+GSG+ + L + AR + F V+ Sbjct: 127 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQF-AVV 181 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 + +G E F + + ++++V+ + +D+ I R + P A+T+AEY + D Sbjct: 182 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 241 Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VL+IL +T +A ++REI+ E+P RGYP ++++L + ER G +KG+IT Sbjct: 242 MQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQ 301 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + + D+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 302 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 352 >gi|113910840|gb|ABI48152.1| ATPase beta subunit [Archidium alternifolium] Length = 472 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ K + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYKTAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|55379722|ref|YP_137572.1| V-type ATP synthase subunit B [Haloarcula marismortui ATCC 43049] gi|74552436|sp|Q5UXY7|VATB_HALMA RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|55232447|gb|AAV47866.1| V-type sodium ATP synthase subunit B [Haloarcula marismortui ATCC 43049] Length = 470 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/276 (31%), Positives = 144/276 (52%), Gaps = 16/276 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+PIDG + D +I+ + +R+ E+ +TG+ ID L G Sbjct: 84 LGRVMDGTGQPIDGGPEIVP-DERRDIVGEAINPFSREYPEEFIQTGVSAIDGMNTLVRG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGREVREFIED 208 Q++ +F+ SG+ + L AR VI +G E EF++D Sbjct: 143 QKLPIFSASGLPHNDLALQIARQATVPEEEDGEDDEGSEFAVIFGAMGITAEEANEFMDD 202 Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 + L++SVV + +D+ + R + P A+T AEY + + D +VL+IL +T + ++ Sbjct: 203 FERTGALERSVVFMNLADDPAVERTITPRLALTTAEYLAFEKDYHVLVILTDMTNYCEAL 262 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REI E+P RGYP ++++L +L ER G E +G++T + + + GD+ PI D Sbjct: 263 REIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQLPILTMPGDDDTHPIPD 322 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 I +G I ++R L +G PP++ L S+SRL D Sbjct: 323 LTGYITEGQIYIDRDLNSQGIQPPINVLPSLSRLMD 358 >gi|307343626|emb|CBJ19230.1| atpD synthase beta subunit [Micromonospora echinaurantiaca] Length = 302 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V D+ P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDKPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + D ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQDHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|262400757|gb|ACY66246.1| ATP synthase CF1 beta subunit [Brassica napus] Length = 498 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 113/366 (30%), Positives = 179/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGD-LSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D L+ + K PA ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214 +IG+F G+G+GK+ L+ + A++ V + ER RE E E + + L Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEL 225 Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + E+ Sbjct: 226 NLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +E + + + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IIAILG 409 >gi|227827832|ref|YP_002829612.1| V-type ATP synthase subunit B [Sulfolobus islandicus M.14.25] gi|227830542|ref|YP_002832322.1| V-type ATP synthase subunit B [Sulfolobus islandicus L.S.2.15] gi|229579355|ref|YP_002837753.1| V-type ATP synthase subunit B [Sulfolobus islandicus Y.G.57.14] gi|229581885|ref|YP_002840284.1| V-type ATP synthase subunit B [Sulfolobus islandicus Y.N.15.51] gi|229585102|ref|YP_002843604.1| V-type ATP synthase subunit B [Sulfolobus islandicus M.16.27] gi|238620005|ref|YP_002914831.1| V-type ATP synthase subunit B [Sulfolobus islandicus M.16.4] gi|284998038|ref|YP_003419805.1| ATP synthase, B subunit [Sulfolobus islandicus L.D.8.5] gi|259710371|sp|C3N6D4|VATB_SULIA RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|259710372|sp|C4KHU9|VATB_SULIK RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|259710373|sp|C3MQL4|VATB_SULIL RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|259710374|sp|C3MW92|VATB_SULIM RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|259710375|sp|C3NGV2|VATB_SULIN RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|259710376|sp|C3NEU2|VATB_SULIY RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|227456990|gb|ACP35677.1| ATP synthase, B subunit [Sulfolobus islandicus L.S.2.15] gi|227459628|gb|ACP38314.1| ATP synthase, B subunit [Sulfolobus islandicus M.14.25] gi|228010069|gb|ACP45831.1| ATP synthase, B subunit [Sulfolobus islandicus Y.G.57.14] gi|228012601|gb|ACP48362.1| ATP synthase, B subunit [Sulfolobus islandicus Y.N.15.51] gi|228020152|gb|ACP55559.1| ATP synthase, B subunit [Sulfolobus islandicus M.16.27] gi|238381075|gb|ACR42163.1| ATP synthase, B subunit [Sulfolobus islandicus M.16.4] gi|284445933|gb|ADB87435.1| ATP synthase, B subunit [Sulfolobus islandicus L.D.8.5] gi|323477641|gb|ADX82879.1| ATP synthase, B subunit [Sulfolobus islandicus HVE10/4] Length = 463 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 161/312 (51%), Gaps = 18/312 (5%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S GR+ N LG +D + KG+ S + PA R+ E+ +TGI ID Sbjct: 84 SEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAA-REYPEEFIQTGISAIDGLNA 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIED 208 L GQ++ +F+GSG+ + L + A+ V+ + +G R + R+F E+ Sbjct: 143 LLRGQKLPIFSGSGLPANMLAAQIAKQATVRGEESNFAVVFAAIGARYDDALFFRKFFEE 202 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 N + ++V+ ++E P+++ + P TA+T+AEY + + D +VL IL +T + ++R Sbjct: 203 TGAIN--RVAMIVSLANEPPVMKTLTPKTALTLAEYLAFEQDMHVLAILIDMTNYCEALR 260 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ E+P GYP ++++L + ER G +KG+IT + + + D+ PI D Sbjct: 261 EISAAREEVPGRGGYPGYMYTDLATIYERAGKVLGKKGSITQMPILTMPNDDITHPIPDL 320 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHR 382 I +G IVL+R+L +G YPP++ L S+SRLA D K + + L R Sbjct: 321 TGYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTRDDHKDVSNQLFASYAR 380 Query: 383 FEETRDIRLIGG 394 +TR + I G Sbjct: 381 AVDTRGLAAIIG 392 >gi|313887580|ref|ZP_07821263.1| ATP synthase ab C terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846458|gb|EFR33836.1| ATP synthase ab C terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] Length = 463 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 105/364 (28%), Positives = 177/364 (48%), Gaps = 21/364 (5%) Query: 49 VVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVI 106 + GK S+ +GQVI+I+ D +V + +G + F F I S+ GRV Sbjct: 33 ISKDGKRSE-IGQVIKIDEDRAVVQVFGNNLGVSTKNTKVEFSAHPFEIPLSSDILGRVF 91 Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 N PID ++ D+ + P+ R+ +TGI ID L GQ++ + Sbjct: 92 NGTAVPIDKGGAIYSKDVYNINGRPINPSA-REYPRNFIQTGISSIDGLMTLIRGQKLPI 150 Query: 167 FAGSGIGKSTLLSMFARS---------DCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217 F+GSG+ + + + R D F ++ + +G + E F E + + Sbjct: 151 FSGSGLPHNEVAAQIVRQAKIADEGGKDNF-AIVFAAIGVKHDEADFFRESFKNSGVIDK 209 Query: 218 VVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGE 275 VV+ + PI+ ++ AP A+T AEY + K VL+I+ IT +A ++RE++++ E Sbjct: 210 VVMYINYADDPIMERLIAPKCALTAAEYLAFEKNMQVLVIMTDITSYAEALREVSSSREE 269 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P +GYP ++S+L L ER G + +G++T + + + D+ PI D I +G Sbjct: 270 VPSRKGYPGHLYSDLAALYERAGMIKDSEGSVTLIPILTMPNDDITHPIPDLTGYITEGQ 329 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIR 390 IV++R L +G YPP++ L S+SRL + D L S L + +ETR + Sbjct: 330 IVVSRDLFSKGVYPPINVLPSLSRLMKDGIGEGYTREDHPDLSSQLFASYSKVQETRALA 389 Query: 391 LIGG 394 I G Sbjct: 390 QIIG 393 >gi|307343610|emb|CBJ19222.1| atpD synthase beta subunit [Micromonospora chalcea] Length = 298 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E V++ + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|24940204|emb|CAD43392.1| ATP synthase beta subunit [Hydrolea sp. Chase 3245] Length = 485 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 115/371 (30%), Positives = 183/371 (49%), Gaps = 33/371 (8%) Query: 49 VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SA 99 +V QG+ D+LGQ I + ++ V + + ++ G V G P Sbjct: 39 LVVQGR--DSLGQPINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAAISVPVGG 96 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D S I P + + F+TGI+V+D+ P Sbjct: 97 STLGRIFNVLGEPVD---DLGPVDASTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAP 153 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESK 212 Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + +N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNILRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYQTAQKVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|307343658|emb|CBJ19246.1| atpD synthase beta subunit [Micromonospora rifamycinica] Length = 308 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 143/259 (55%), Gaps = 8/259 (3%) Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGER 198 ++ +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER Sbjct: 4 DRELETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGER 63 Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256 RE + I + + K+ +V DE P R L+A+T+AEYF K VLL + Sbjct: 64 TREGNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFI 123 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V Sbjct: 124 DNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVP 181 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS- 375 D++ DP + + LD L RS++++G YP VDPLAS SR+ + +E V++ Sbjct: 182 ADDYTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFTVATE 241 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ R+++ +DI I G Sbjct: 242 VKRILQRYKDLQDIIAILG 260 >gi|150020193|ref|YP_001305547.1| F0F1 ATP synthase subunit beta [Thermosipho melanesiensis BI429] gi|166222423|sp|A6LJR1|ATPB_THEM4 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|149792714|gb|ABR30162.1| ATP synthase F1, beta subunit [Thermosipho melanesiensis BI429] Length = 469 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/300 (33%), Positives = 164/300 (54%), Gaps = 11/300 (3%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N +G+PIDG + + D+ + + PP++ Q + +TGI+VID+ P Sbjct: 90 LGRMFNVIGEPIDGKEDVK--DVEYWPIHRTPPSITEQSTSVEILETGIKVIDLLAPFPK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKK 216 G +IG F G+G+GK+ L+ R+ + S+ VGER RE E D + L Sbjct: 148 GGKIGFFGGAGVGKTVLVMELIRNIAIEHHGFSMFAGVGERTREGNELYLDMQEAEVLDN 207 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 +V+V +E P R L+A+T+AEYF +G +VLL +D+I RF + E++ G Sbjct: 208 TVLVFGQMNEPPGARFRVALSALTMAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGR 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 268 MPSAVGYQPTLATDMGELQERI--TSTKKGSITSVQAIYVPADDITDPAPATTFTHLDAT 325 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R A G YP VDPL S S++ D E ++ + ++ R+++ +DI I G Sbjct: 326 VVLSRRRAALGLYPAVDPLDSTSKMLDPNVVGQEHYEVARGVQEVLQRYKDLQDIIAILG 385 >gi|307343672|emb|CBJ19253.1| atpD synthase beta subunit [Micromonospora sp. GUI2] gi|307343704|emb|CBJ19269.1| atpD synthase beta subunit [Micromonospora sp. GUI42] Length = 298 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|183206578|gb|ACC54487.1| ATP synthase beta subunit [Campanula rapunculoides] Length = 466 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 110/366 (30%), Positives = 175/366 (47%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWG-RFRISPSACWCGR 104 K DNLGQ I + ++ V + + + G V G + GR Sbjct: 23 KGRDNLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGIPLSVPVGGATLGR 82 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P ++ F+TGI+V+D+ P G Sbjct: 83 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 139 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +I +F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 140 KIXLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 198 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 199 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 258 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 259 SALFGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 316 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E +D Sbjct: 317 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQRYKELQD 376 Query: 389 IRLIGG 394 I I G Sbjct: 377 IITILG 382 >gi|313127571|ref|YP_004037841.1| ATP synthase, b subunit [Halogeometricum borinquense DSM 11551] gi|312293936|gb|ADQ68396.1| ATP synthase, B subunit [Halogeometricum borinquense DSM 11551] Length = 471 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 85/276 (30%), Positives = 144/276 (52%), Gaps = 16/276 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GRV++ G+PIDG + D + + + P +R+ E+ +TG+ +D L G Sbjct: 84 LGRVLDGSGQPIDGGPEIVPDDRHDIVGAAINP-YSREYPEEFIQTGVAAVDGMNTLVRG 142 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFD-------------KVIISLVGERGREVREFIED 208 Q++ +F+ SG+ + L AR V+ +G E EF++D Sbjct: 143 QKLPIFSASGLPHNDLALQIARQATVPEEAAEEGEEGSEFAVVFGAMGITAEEANEFMDD 202 Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 + L++SVV + +D+ + R + P A+T AEY + + D +VL+IL +T + ++ Sbjct: 203 FERTGALERSVVFMNLADDPAVERTVTPRMALTTAEYLAFEKDYHVLVILTDMTNYCEAL 262 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REI E+P RGYP ++++L +L ER G E +G++T + + + GD+ PI D Sbjct: 263 REIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQIPILTMPGDDDTHPIPD 322 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 I +G I ++R L +G PPV+ L S+SRL D Sbjct: 323 LTGYITEGQIYVDRDLHSQGVQPPVNVLPSLSRLMD 358 >gi|197132374|gb|ACH47705.1| ATP synthase CF1 beta subunit [Geranium carolinianum] Length = 498 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 159/307 (51%), Gaps = 22/307 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D ++ I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTEITSPIHRSAPDFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + ++ K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + A+ ++ + + R Sbjct: 338 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGAEHYEIAQRVKETLQR 397 Query: 383 FEETRDI 389 ++E +DI Sbjct: 398 YKELQDI 404 >gi|1199639|gb|AAC06376.1| A1AO H+ ATPase, subunit B [Methanosarcina mazei Go1] Length = 460 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 97/324 (29%), Positives = 163/324 (50%), Gaps = 29/324 (8%) Query: 86 LVFHWGRFRISPSACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQ 139 ++F ++ S GR++ G+P DG D L +M +++PP Sbjct: 69 VIFTGETLKLPASVDLLGRILFGSGEPRDGGPRIVPDQLLDINGAAMNPYARLPP----- 123 Query: 140 RVEKGF-KTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVII 192 K F +TGI ID L GQ++ +F+ SG+ + + AR S+ V+ Sbjct: 124 ---KDFIQTGISTIDGTNTLVRGQKLPIFSASGLPHNEIALQIARQASVPGSESAFAVVF 180 Query: 193 SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGD 250 + +G E + F+ D+ L+++VV + +DE + R + P A+T AEY + G Sbjct: 181 AAMGITNEEAQYFMSDFEKTGALERAVVFLNLADEPAVERIVTPRMALTAAEYLAYEHGM 240 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VL+IL IT +A ++R++ E+P RGYP ++++L L ER G + KG++T + Sbjct: 241 HVLVILTDITNYAEALRQMGAARNEVPGRRGYPGYMYTDLATLYERAGIVKGAKGSVTQI 300 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA--- 367 + + GD+ PI D I +G IV+ R L +G YPP++ L S+SRL + A Sbjct: 301 PILSMPGDDITHPIPDLSGYITEGQIVVARELHRKGIYPPINVLPSLSRLMNSGIGAGKT 360 Query: 368 -DEKKLVSSLTHLIHRFEETRDIR 390 ++ K VS + + E RD+R Sbjct: 361 REDHKAVSD--QMYAGYAEGRDLR 382 >gi|20091272|ref|NP_617347.1| F0F1 ATP synthase subunit beta [Methanosarcina acetivorans C2A] gi|19916394|gb|AAM05827.1| H(+)-transporting ATP synthase, subunit beta [Methanosarcina acetivorans C2A] Length = 484 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 11/293 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 R+ + G PID ++ + + PP + R+ F+TGI+VID+ PL G Sbjct: 107 RMFDVFGNPID--HRAPPSNVRWRTIHQAPPPLIRRSTRSEIFETGIKVIDVLVPLERGG 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 + G+F G+G+GK+ LL+ + + +S+ +GER RE E D L +V Sbjct: 165 KAGLFGGAGVGKTVLLTEMIHNVVRQQKGVSIFCGIGERCREGEELYRDMKEAGVLPNTV 224 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R A+T+AEYF + +VLL++D+I RF + E++ G++P Sbjct: 225 MVFGQMNEPPGARFRVGHVALTMAEYFRDDEHRDVLLLIDNIFRFIQAGSEVSGLMGQMP 284 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +EL L ERI S + G I ++ +V V D+ DP A S L IV Sbjct: 285 SRLGYQPTMGTELSELEERI--SNTDAGAIMSIQAVYVPADDFTDPAAVHTFSHLSASIV 342 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R A EG YP +DPL S S+++ + +L + + ++ E +DI Sbjct: 343 LSRKRASEGLYPAIDPLQSNSKMSTPGIIGERHYRLAQEIRQTLAQYAELKDI 395 >gi|183206528|gb|ACC54462.1| ATP synthase beta subunit [Legousia pentagonia] Length = 497 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 158/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 103 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 159 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 218 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261 E G++ K +V +E P R LTA+T+AEYF +VLL +D+I R Sbjct: 219 GVINEQKFGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFR 276 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ Sbjct: 277 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLT 334 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +DE K S+ + Sbjct: 335 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRVVSDEHYKTAQSVKQTL 394 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 395 QRYKELQDIITILG 408 >gi|87301228|ref|ZP_01084069.1| ATP synthase subunit B [Synechococcus sp. WH 5701] gi|87284196|gb|EAQ76149.1| ATP synthase subunit B [Synechococcus sp. WH 5701] Length = 492 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 164/312 (52%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIF 155 GR++N LG+P+D +G ++ + + + PP + + K F+TGI+VID+ Sbjct: 100 ATLGRILNVLGEPVDE-----RGPVTTNLTASIHRDPPKLTELETKPKVFETGIKVIDLL 154 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL-- 210 P G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 155 APYRQGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKES 214 Query: 211 ----GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 ++L KS V + +E P R L+A+T+AE+F +VLL +D+I RF Sbjct: 215 GVINSEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFV 274 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP Sbjct: 275 QAGSEVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDP 332 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + DE + ++ + R Sbjct: 333 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARAVQSTLQR 392 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 393 YKELQDIIAILG 404 >gi|114538|sp|P28250|ATPB_ANGLY RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|11190|emb|CAA41331.1| adenosinetriphosphatase [Angiopteris lygodiifolia] Length = 492 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + K PA + + F+TGI+V+D+ P Sbjct: 105 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 222 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 223 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ +SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 341 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 399 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 400 QDIIAILG 407 >gi|86147154|ref|ZP_01065470.1| ATP synthase subunit B [Vibrio sp. MED222] gi|218711023|ref|YP_002418644.1| F0F1 ATP synthase subunit beta [Vibrio splendidus LGP32] gi|85835038|gb|EAQ53180.1| ATP synthase subunit B [Vibrio sp. MED222] gi|218324042|emb|CAV20404.1| ATP synthase beta chain [Vibrio splendidus LGP32] Length = 467 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 156/305 (51%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 GR++N LG ID +G + + + P+ Q E +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDECGEIGAEEHYA--IHREAPSYEEQSNETALLETGVKVIDLICPFAKG 143 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLK 215 +IG+F G+G+GK+ + + +S+ VGER RE +F +++ N++ Sbjct: 144 GKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNIE 203 Query: 216 KS-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 204 KPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 264 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKAGSITSVQAVYVPADDLTDPSPATTFA 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD +VLNR++A G YP +DPL S SR D E + + + R++E +DI Sbjct: 322 HLDATVVLNRNIASMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQSTLQRYKELKDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|307343624|emb|CBJ19229.1| atpD synthase beta subunit [Micromonospora eburnea] Length = 297 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ S + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVASEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|307566500|ref|ZP_07628930.1| ATP synthase F1, beta subunit [Prevotella amnii CRIS 21A-A] gi|307344782|gb|EFN90189.1| ATP synthase F1, beta subunit [Prevotella amnii CRIS 21A-A] Length = 508 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N +G+PIDG ++L SME I + P ++ TGI+VID+ P Sbjct: 95 GRMLNVIGQPIDGMEAL-----SMEGAYPIHREAPKFEELSTRKEILSTGIKVIDLLEPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ L+ + + + VGER RE + I D L Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVI 209 Query: 211 ---------------------GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS 247 + LKKS +V +E P R L+ +T+AE F Sbjct: 210 KYGEKFHEAMQKGLWDLSLIDKEELKKSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269 Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 G +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + Sbjct: 270 HGGKDGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TS 327 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G+IT+V +V V D+ DP + S LD VL+R +AE G YP VDPLAS SR+ Sbjct: 328 TKNGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKIAELGIYPAVDPLASTSRIL 387 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D E + + + + E +DI I G Sbjct: 388 DPLIVGKEHYECAQRVKETLQHYNELQDIIAILG 421 >gi|307343734|emb|CBJ19284.1| atpD synthase beta subunit [Micromonospora sp. SGA3] Length = 302 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E V++ + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|242806501|ref|XP_002484756.1| ATP synthase F1, beta subunit, putative [Talaromyces stipitatus ATCC 10500] gi|218715381|gb|EED14803.1| ATP synthase F1, beta subunit, putative [Talaromyces stipitatus ATCC 10500] Length = 520 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 153/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K I ++ P + + TGI+V+D+ P G Sbjct: 131 LGRIMNVTGDPIDERGPI-KATKYAPIHTEPPSFAEQSTSAEVLVTGIKVVDLLAPYARG 189 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L++ A++ V VGER RE + + + Sbjct: 190 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 248 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 249 EGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 308 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 309 ALLGRIPSAVGYQPTLAVDMGVMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 366 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D + D + S + ++ ++ +DI Sbjct: 367 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGEDHYQTASRVQQMLQEYKSLQDI 426 Query: 390 RLIGG 394 I G Sbjct: 427 IAILG 431 >gi|197334159|ref|YP_002157351.1| ATP synthase F1, beta subunit [Vibrio fischeri MJ11] gi|226740689|sp|B5FCZ1|ATPB_VIBFM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|197315649|gb|ACH65096.1| ATP synthase F1, beta subunit [Vibrio fischeri MJ11] Length = 467 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 158/308 (51%), Gaps = 23/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N LG ID GD+ E I + P + + +TG++VID+ P Sbjct: 86 GRIMNVLGDAIDE-----CGDIDAEEHYAIHREAPSYEEQSNSTELLETGVKVIDLVCPF 140 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGD 212 G +IG+F G+G+GK+ + + +S+ VGER RE +F +++ Sbjct: 141 AKGGKIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVV 200 Query: 213 NLKKS-----VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 N++K +V +E P R LT +T+AE F +G +VLL +D+I R+ + Sbjct: 201 NIEKPEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGT 260 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ L ERI + ++G+IT+V +V V D+ DP + Sbjct: 261 EVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSVQAVYVPADDLTDPSPAT 318 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD +VLNR++A G YP +DPL S SR D E V+ + + R++E Sbjct: 319 TFAHLDATVVLNRNIAAMGLYPAIDPLDSTSRQLDPLVVGQEHYDVARGVQSTLQRYKEL 378 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 379 KDIIAILG 386 >gi|148240336|ref|YP_001225723.1| F0F1 ATP synthase subunit beta [Synechococcus sp. WH 7803] gi|166222422|sp|A5GNB1|ATPB_SYNPW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|147848875|emb|CAK24426.1| ATP synthase beta chain [Synechococcus sp. WH 7803] Length = 487 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + I P + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPV-NASATAPIHRSAPKLTELETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKDSGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 ++L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 AEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + A +E K ++ + R++E Sbjct: 334 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGEEHYKTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|94986145|ref|YP_605509.1| V-type ATP synthase subunit B [Deinococcus geothermalis DSM 11300] gi|123256976|sp|Q1IWP4|VATB_DEIGD RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|94556426|gb|ABF46340.1| V-type H+-ATPase subunit B [Deinococcus geothermalis DSM 11300] Length = 470 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 149/276 (53%), Gaps = 11/276 (3%) Query: 94 RISPSACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ S GR + LG+PIDG + + L++ P A R + E+ +TGI I Sbjct: 82 RLGVSREMIGRRFDGLGRPIDGLPPVVAEKRLNINGEPMNPAA--RAKPEEFIQTGISTI 139 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFI 206 D+ T L GQ++ +F+GSG+ + L + AR V+ + +G REV F Sbjct: 140 DVNTSLIRGQKLPIFSGSGLPHNELAAQIARQAKVPGHEGDFAVVFAAMGLTQREVSFFT 199 Query: 207 EDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAH 264 +++ L +SV+ + +D+ + R + P A+T AEY + G +VL+IL +T + Sbjct: 200 QEFERTGALARSVLFLNRADDPAVERLLTPRMALTTAEYLAFEHGYHVLVILTDMTNYCE 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI E+P RG+P ++++L L ER G + + G++T + + + D+ PI Sbjct: 260 ALREIGGAREEIPGRRGFPGYMYTDLASLYERAGVVQGKPGSVTQIPILSMPDDDITHPI 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 D I +G IV++R L +G +PP++PL S+SRL Sbjct: 320 PDLTGYITEGQIVVDRGLNAKGIFPPINPLPSLSRL 355 >gi|325107763|ref|YP_004268831.1| ATP synthase F1 subcomplex subunit beta [Planctomyces brasiliensis DSM 5305] gi|324968031|gb|ADY58809.1| ATP synthase F1 subcomplex beta subunit [Planctomyces brasiliensis DSM 5305] Length = 481 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 105/309 (33%), Positives = 167/309 (54%), Gaps = 24/309 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GRV N LG IDG +GD+ E I + P + + F+TGI+V+D+ TP Sbjct: 96 GRVFNVLGDTIDG-----RGDVQTEERWPIHRQAPALDDLSSKTELFETGIKVVDLLTPF 150 Query: 159 CHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLG 211 G + G+F G+G+GK+ +L+ + AR S + + VGER RE E E +G Sbjct: 151 VRGGKAGLFGGAGLGKTVILTELIARIASAHGGYSVFAGVGERTREGNDLWLEMQETKIG 210 Query: 212 DN----LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 ++++ +V +E P R L+A+T+AE+F + G + LL +D+I RF+ + Sbjct: 211 QTDRSVIEQTCMVFGQMNEPPGSRLRVALSALTMAEWFRDTTGTDTLLFVDNIFRFSQAG 270 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +EL L ERI + ++G IT+V +V V D+ DP Sbjct: 271 SEVSALLGRMPSAVGYQPTLATELGALQERI--TSTKRGAITSVQAVYVPADDPTDPAPA 328 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + S LD I L R ++E+G YP +DPLAS SR+ D + + V+ + ++ R+ E Sbjct: 329 TAFSHLDAFIYLERKISEKGIYPAIDPLASSSRILDPQYVGERHYTVARRVQQILQRYRE 388 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 389 LQDIIAILG 397 >gi|183206624|gb|ACC54510.1| ATP synthase beta subunit [Campanula exigua] Length = 477 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 198 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQSVKQTLQR 376 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 377 YKELQDIITILG 388 >gi|189502302|ref|YP_001958019.1| F0F1 ATP synthase subunit beta [Candidatus Amoebophilus asiaticus 5a2] gi|226739972|sp|B3EST8|ATPB_AMOA5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|189497743|gb|ACE06290.1| hypothetical protein Aasi_0925 [Candidatus Amoebophilus asiaticus 5a2] Length = 502 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 40/329 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+ IDG K + I P + + TGI+VID+ P G Sbjct: 89 GRLFNVIGEAIDGLPQ-PKTQQKLPIHRPAPKFKDISTATEVLYTGIKVIDLLAPYVKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE IE + G+ Sbjct: 148 KIGLFGGAGVGKTVLIMELIDNIAKSYAGLSVFAGVGERTREGNDLLREMIESGVINYGE 207 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-----S 246 +KS+ +V +ESP R LT +T AEYF Sbjct: 208 EFRKSMEAGGWDLSKVDREALNKSHATLVFGQMNESPGARARVALTGLTAAEYFRDGNGQ 267 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 KG +VLL +D+I RF + E++T G +P A GY ++ +E+ + ERI + + G+ Sbjct: 268 EKGKDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLATEMGAMQERI--TSVKNGS 325 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAW 365 IT+V +V V D+ DP + + LD VL+R +A G YP VDPL S SR+ + + Sbjct: 326 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIASLGIYPAVDPLESSSRILNPEVL 385 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + +++ R++E +DI I G Sbjct: 386 GEIHYNTAQRVKNILQRYKELQDIIAILG 414 >gi|224179490|ref|YP_002601016.1| CF1 beta subunit of ATP synthase [Monomastix sp. OKE-1] gi|217314533|gb|ACK36876.1| CF1 beta subunit of ATP synthase [Monomastix sp. OKE-1] Length = 482 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 159/309 (51%), Gaps = 20/309 (6%) Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D G S GK ++ I P ++ F+TGI+V+D+ P Sbjct: 95 LGRIFNVLGEPVDELGPVSTGKVK-TLPIHRTAPAFVDLDTKLSIFETGIKVVDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 213 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D + +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 214 TDKMSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W D K S+ + R++E Sbjct: 332 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGDDHYKAAQSVKRTLQRYKE 390 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 391 LQDIIAILG 399 >gi|183206632|gb|ACC54514.1| ATP synthase beta subunit [Githopsis pulchella] Length = 485 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D ++ I P ++ F+TGI+V+D+ Sbjct: 91 GATLGRIFNVLGEPID---NLGPVDTRITAPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 147 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 206 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 207 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 266 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 267 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 324 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + S D + S+ + R Sbjct: 325 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDDHYETAQSVKQTLQR 384 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 385 YKELQDIITILG 396 >gi|307343678|emb|CBJ19256.1| atpD synthase beta subunit [Micromonospora sp. GUI12] gi|307343696|emb|CBJ19265.1| atpD synthase beta subunit [Micromonospora sp. GUI34] Length = 301 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E V++ + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|209696443|ref|YP_002264374.1| F0F1 ATP synthase subunit beta [Aliivibrio salmonicida LFI1238] gi|226739970|sp|B6EHG4|ATPB_ALISL RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|208010397|emb|CAQ80743.1| ATP synthase beta chain [Aliivibrio salmonicida LFI1238] Length = 467 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 95/304 (31%), Positives = 154/304 (50%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G + I P + + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDECGEIG-AEEHYSIHRAAPSYEEQANSTELLETGVKVIDLICPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF---IEDYLGDNLK- 215 +IG+F G+G+GK+ + + +S+ VGER RE +F +++ N++ Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNIEH 204 Query: 216 ----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFIDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTRSGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E + ++ + R++E +DI Sbjct: 323 LDATVVLNRNIASMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARNVQSTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|183206538|gb|ACC54467.1| ATP synthase beta subunit [Pseudonemacladus oppositifolius] Length = 498 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTAPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVIKEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|311696887|gb|ADP99760.1| F0F1 ATP synthase subunit alpha [marine bacterium HP15] Length = 505 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 107/343 (31%), Positives = 170/343 (49%), Gaps = 13/343 (3%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDS 118 G V+ + D + + +G + I+ G+ V+ + F + GR+++A G P DG+ S Sbjct: 57 GVVLDLEPDRLGVILLGPSDRITAGEDVWRTHKVFSVPVGNGLLGRILDATGGPRDGNGS 116 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS--- 175 + + + P ++R V + TGI+VID P+ GQR + GK+ Sbjct: 117 VAS-TAERPVEASAPGILSRAPVNRPLATGIKVIDGAVPIGLGQRELIIGDRQTGKTSIA 175 Query: 176 --TLLSMFARSDCFDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRK 232 T+L+ ARSD I +G+RG V IE L +VVV A +++P L Sbjct: 176 IDTILNQ-ARSDVVS--IYCAIGQRGDAVARVIETLRKSGQLANTVVVAAGDEDAPGLAY 232 Query: 233 MAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPR 292 +AP A+T+AEYF+ +G +VL++ D +T A S RE++ P +P +F R Sbjct: 233 VAPYAAMTMAEYFADQGRDVLVVFDDLTHHARSYRELSLLLRRPPGREAFPGDIFYVHAR 292 Query: 293 LLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 LLER G E G+ITA+ V +N + I ++ SI DG I L+ L + ++P Sbjct: 293 LLERAGQFTPEAGGGSITALPVVETQAENLSAYIPTNLISITDGQIYLSPRLVRKNQFPA 352 Query: 351 VDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 VD SVSR+ KA +++ +L + +FEE D G Sbjct: 353 VDIGLSVSRVGGKAQHRAFREVAGNLRVTLSQFEELEDFARFG 395 >gi|307343662|emb|CBJ19248.1| atpD synthase beta subunit [Micromonospora saelicesensis] Length = 298 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADH 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGNEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|15897485|ref|NP_342090.1| V-type ATP synthase subunit B [Sulfolobus solfataricus P2] gi|284174802|ref|ZP_06388771.1| V-type ATP synthase subunit B [Sulfolobus solfataricus 98/2] gi|12585503|sp|Q9UWW8|VATB_SULSO RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|6015908|emb|CAB57735.1| atpase-beta chain (membrane-associated) [Sulfolobus solfataricus P2] gi|13813730|gb|AAK40880.1| ATP synthase subunit B (atpB) [Sulfolobus solfataricus P2] gi|261602245|gb|ACX91848.1| ATP synthase, B subunit [Sulfolobus solfataricus 98/2] Length = 463 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 95/307 (30%), Positives = 161/307 (52%), Gaps = 19/307 (6%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S GR+ N LG +D + KG+ S + PA R+ E+ +TGI ID Sbjct: 84 SEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAA-REYPEEFIQTGISAIDGLNA 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIED 208 L GQ++ +F+GSG+ + L + A+ V+ + +G R + R+F E+ Sbjct: 143 LLRGQKLPIFSGSGLPANMLAAQIAKQATVRGEESNFAVVFAAIGARYDDALFFRKFFEE 202 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 N + ++V+ ++E P+++ + P TA+T+AEY + + D +VL IL +T + ++R Sbjct: 203 TGAIN--RVAMIVSLANEPPVMKTLTPKTALTLAEYLAFEQDMHVLAILIDMTNYCEALR 260 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ E+P GYP ++++L + ER G +KG+IT + + + D+ PI D Sbjct: 261 EISAAREEVPGRGGYPGYMYTDLATIYERAGKVIGKKGSITQMPILTMPNDDITHPIPDL 320 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRF 383 I +G IVL+R+L +G YPP++ L S+SRLA + + D+ K VS+ L + Sbjct: 321 TGYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTRDDHKDVSN--QLFASY 378 Query: 384 EETRDIR 390 D R Sbjct: 379 ARAVDTR 385 >gi|183206524|gb|ACC54460.1| ATP synthase beta subunit [Legousia speculum-veneris] Length = 498 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLAIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEEKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRVVSDEHYKTAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|307343654|emb|CBJ19244.1| atpD synthase beta subunit [Micromonospora peucetia] Length = 291 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|307343634|emb|CBJ19234.1| atpD synthase beta subunit [Micromonospora fulviviridis] Length = 302 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ S + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVASEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|164566149|gb|ABY61217.1| ATP synthase beta subunit [Danaea wendlandii] Length = 394 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|84393416|ref|ZP_00992173.1| ATP synthase subunit B [Vibrio splendidus 12B01] gi|84375932|gb|EAP92822.1| ATP synthase subunit B [Vibrio splendidus 12B01] Length = 467 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 150/304 (49%), Gaps = 15/304 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N LG ID +G + I + P + +TG++VID+ P G Sbjct: 86 GRIMNVLGDAIDECGEIG-AEEHYAIHREAPSYEEQSNETSLLETGVKVIDLICPFAKGG 144 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------IEDYLG 211 +IG+F G+G+GK+ + + +S+ VGER RE +F + + Sbjct: 145 KIGLFGGAGVGKTVNMMELINNIALQHSGLSVFAGVGERTREGNDFYFEMQEAGVVNIEN 204 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE F +G +VLL +D+I R+ + E++ Sbjct: 205 PEESKVAMVYGQMNEPPGNRLRVALTGLTMAERFRDEGRDVLLFVDNIYRYTLAGTEVSA 264 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 265 LLGRMPSAVGYQPTLAEEMGVLQERI--TSTKAGSITSVQAVYVPADDLTDPSPATTFAH 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD +VLNR++A G YP +DPL S SR D E + + + R++E +DI Sbjct: 323 LDATVVLNRNIASMGLYPAIDPLDSTSRQLDPLVVGQEHYDIARGVQSTLQRYKELKDII 382 Query: 391 LIGG 394 I G Sbjct: 383 AILG 386 >gi|38422324|emb|CAE45326.1| unnamed protein product [Magnetospirillum gryphiswaldense] gi|144898923|emb|CAM75787.1| F1-ATP synthase, beta subunit [Magnetospirillum gryphiswaldense MSR-1] Length = 474 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G PID +G + I ++ P +++ + TGI+VID+ P G Sbjct: 87 LGRILNVIGDPIDERGPVGNTQ-TRPIHAEAPAFIDQSTDAEILVTGIKVIDLLAPYLKG 145 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L++ A++ V VGER RE + + + + Sbjct: 146 GKIGLFGGAGVGKTVTIMELINNVAKAHGGVSVFAG-VGERTREGNDLYHEMMESGVIKI 204 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 K +V +E P R L+ +T+AEYF +G +VL +D+I RF + E+ Sbjct: 205 DGPGSKVALVYGQMNEPPGARARVALSGLTVAEYFRDEEGQDVLFFVDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 265 SALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPAASF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE +P VDPL S SR D +E V+ + ++ ++ +D Sbjct: 323 AHLDATTVLSRSIAEMAIFPAVDPLDSTSRALDPRIVGEEHYGVAREVQRILQTYKSLQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|260174635|ref|ZP_05761047.1| F0F1 ATP synthase subunit beta [Bacteroides sp. D2] gi|315922899|ref|ZP_07919139.1| ATP synthase subunit beta [Bacteroides sp. D2] gi|313696774|gb|EFS33609.1| ATP synthase subunit beta [Bacteroides sp. D2] Length = 506 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 105/329 (31%), Positives = 162/329 (49%), Gaps = 50/329 (15%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G IDG L KG S I + P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKGLDRKGAYS--IHREPPKFEDLTTVQEVLFTGIKVIDLLEPYAKG 150 Query: 162 QRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE----- 207 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIR 208 Query: 208 -------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS 246 DY + L+KS V + +E P R L+ +T+AE F Sbjct: 209 YGEAFKEGMEKGHWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESFR 266 Query: 247 SKGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 267 DAGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TS 324 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 KG+IT+V +V V D+ DP + S LD VL+R + E G YP VDPLAS SR+ Sbjct: 325 TRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRIL 384 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDI 389 D E + + ++ R +E +DI Sbjct: 385 DPHIVGQEHYDIAQQVKQILQRNKELQDI 413 >gi|229915483|gb|ACQ90827.1| CF1 beta subunit of ATP synthase [Pedinomonas minor] Length = 480 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D +G D + I P ++ F+TGI+V+D+ P G Sbjct: 97 GRIFNVLGEPVDNLGPVGAKD-GLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 155 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------ED 208 +IG+F G+G+GK+ L+ + A++ V + ER RE + E Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEG 214 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 215 NLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 272 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 273 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 330 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + DE + + + R++E Sbjct: 331 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGDEHYQTAQRVKQTLQRYKEL 390 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 391 QDIIAILG 398 >gi|327538812|gb|EGF25459.1| F0F1 ATP synthase subunit beta [Rhodopirellula baltica WH47] Length = 484 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 14/318 (4%) Query: 81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 +S G V GR ++ GRV++ G +D +SL + + + PP +NR Sbjct: 91 LSRGTPVRSCGRSMQVPVGKPLLGRVLDVFGNTLDDGESLKS--VEHRSIHQTPPTINR- 147 Query: 140 RVEKG--FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194 R+ K F TGI+ ID+ +PL G + G+F G+G+GK+ L++ + ISL Sbjct: 148 RIAKSEVFTTGIKAIDLLSPLERGGKAGLFGGAGVGKTVLITELIHNIVGGHDGISLFCG 207 Query: 195 VGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252 +GER RE E + ++ +V+V +E P R A+T+AE F +V Sbjct: 208 IGERCREAEELYREMGAAGVRDNTVMVFGQMNEPPGARFRVGHAALTMAESFRDDAKQDV 267 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LL++D+I RF + E++ G+LP GY S+ S+L L ERI IT+V + Sbjct: 268 LLLIDNIFRFVQAGMEVSGLLGQLPSRVGYQPSLASDLAELEERI--CTTSDAAITSVQA 325 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371 V V D+ DP A + L +VL+R A EG YP +DPL S S + D K Sbjct: 326 VYVPADDFTDPSAVHTFAHLSATVVLSRKRASEGLYPAIDPLKSTSEMMLPGVVGDRHYK 385 Query: 372 LVSSLTHLIHRFEETRDI 389 S++ + +EE +DI Sbjct: 386 TASNVRQTLAGYEELKDI 403 >gi|225419877|ref|ZP_03762180.1| hypothetical protein CLOSTASPAR_06218 [Clostridium asparagiforme DSM 15981] gi|225041501|gb|EEG51747.1| hypothetical protein CLOSTASPAR_06218 [Clostridium asparagiforme DSM 15981] Length = 457 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 94/312 (30%), Positives = 161/312 (51%), Gaps = 18/312 (5%) Query: 98 SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S R+ + LG+PIDG D L + + + + P A R ++ +TG+ ID Sbjct: 82 SEDMLSRIFDGLGRPIDGGPDILPEKRMDINGLPMNPAA--RNYPQEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY 209 L GQ++ +F+ SG+ + L + AR SD F V+ + +G E F+E + Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTSDPF-AVVFAAMGITFEEANFFMESF 198 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIR 267 + +SV+ + +++ + R P A+T AEY + K +VL+IL IT +A ++R Sbjct: 199 KETGAIDRSVMFINLANDPAVERIATPRMALTAAEYLAFEKNMHVLVILTDITNYADALR 258 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ E+P RGYP ++++L L ER G + + G+IT + + + D+ PI D Sbjct: 259 EVSAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKNGSITMIPILSMPEDDKTHPIPDL 318 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHR 382 I +G I+L+R L +G PP+D L S+SRL DK AD +++ L R Sbjct: 319 TGYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGIGEGKTRADHANVMNQLFAAYAR 378 Query: 383 FEETRDIRLIGG 394 ++ +++ +I G Sbjct: 379 GKDAKELMVILG 390 >gi|184127873|gb|ACC67836.1| ATP synthase beta chain [Angiopteris smithii] Length = 402 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + K PA + + F+TGI+V+D+ P Sbjct: 15 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 72 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 73 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 132 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 133 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 192 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ +SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 193 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 250 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 251 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 309 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 310 QDIIAILG 317 >gi|73670558|ref|YP_306573.1| F0F1 ATP synthase subunit beta [Methanosarcina barkeri str. Fusaro] gi|72397720|gb|AAZ71993.1| H(+)-transporting ATP synthase, subunit beta [Methanosarcina barkeri str. Fusaro] Length = 474 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 90/263 (34%), Positives = 137/263 (52%), Gaps = 8/263 (3%) Query: 133 PPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVII 192 PP M R + F+TGI+ ID+ PL G + G+F G+G+GK+ LL+ + + Sbjct: 125 PPLMRRSTTSEIFETGIKAIDVLVPLERGGKAGLFGGAGVGKTVLLTEMIHNVVKQHQGV 184 Query: 193 SL---VGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SS 247 S+ +GER RE E D L +V+V +E P R TA+T+AEYF Sbjct: 185 SIFCGIGERCREGEELYRDMKDAGVLPHTVMVFGQMNEPPGARFRVGHTALTMAEYFRDD 244 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 + +VLL++D+I RF + E++ G++P GY ++ +EL L ERI S + G I Sbjct: 245 ERRDVLLLIDNIFRFIQAGSEVSGLMGQMPSRLGYQPTLGTELSELEERI--STTDAGAI 302 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 ++ +V V D+ DP A S L IVL+R A EG YP +DPL S S++A Sbjct: 303 MSIQAVYVPADDFTDPSAVHTFSHLSASIVLSRKRASEGLYPAIDPLQSNSKMATPGIIG 362 Query: 368 DEK-KLVSSLTHLIHRFEETRDI 389 + L + + ++ E +DI Sbjct: 363 ERHYHLAQKIRQTLAQYSELKDI 385 >gi|330850821|ref|YP_004376571.1| ATP synthase CF1 beta chain [Fistulifera sp. JPCC DA0580] gi|328835641|dbj|BAK18937.1| ATP synthase CF1 beta chain [Fistulifera sp. JPCC DA0580] Length = 475 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N +G+P+D G+ S D ++ I P + F+TGI+V+D+ P Sbjct: 91 LGRIFNVIGEPVDEQGEVSF---DETLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYR 147 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ + A++ V + ER RE + E+ + Sbjct: 148 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVI 206 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 207 NSKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAG 266 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 267 SEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPA 324 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R+LA +G YP VDPL S S + ++E ++ S+ + R++E Sbjct: 325 TTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPDIVSEEHYRIAESVKETLQRYKE 384 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 385 LQDIIAILG 393 >gi|330792833|ref|XP_003284491.1| hypothetical protein DICPUDRAFT_52984 [Dictyostelium purpureum] gi|325085521|gb|EGC38926.1| hypothetical protein DICPUDRAFT_52984 [Dictyostelium purpureum] Length = 652 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 99/340 (29%), Positives = 169/340 (49%), Gaps = 18/340 (5%) Query: 69 IVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME 127 IV + I + + G V + G + P GR++N +G+PIDG + + Sbjct: 157 IVRCVALDITDGLGRGAKVLNSGAPLMVPVGNVTLGRIMNVIGEPIDGCGPINATE--RR 214 Query: 128 IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC 186 + + PP + +TGI+VID+ P G +IG+F G+G+GK+ L+ + Sbjct: 215 PIWRSPPHFSELAPSASILETGIKVIDLLAPYARGGKIGLFGGAGVGKTVLIQELINNIA 274 Query: 187 FDK---VIISLVGERGREVREFIEDYLGDNLKKS-------VVVVATSDESPILRKMAPL 236 + + VGER RE + + + + K+ +V +E P R L Sbjct: 275 KAHGGFSVFAGVGERTREGNDLYHEMVSAGVIKTDGPGSKVALVFGQMNEPPGARARVTL 334 Query: 237 TAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 T +T+AEYF G +VLL +D+I RF + E++ G +P A GY ++ +++ + E Sbjct: 335 TGLTVAEYFRDVDGQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGSMQE 394 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI ++K G+IT+V +V V D+ DP + + LD VL+R+++E G YP VDPL Sbjct: 395 RIATTKK--GSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAISELGIYPCVDPLD 452 Query: 356 SVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 S S + D A+ + + + ++ ++ +DI I G Sbjct: 453 STSLMMDPNIIGAEHYTVATDVQKILQEYKSLQDIIAILG 492 >gi|289523020|ref|ZP_06439874.1| V-type sodium ATPase, B subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503563|gb|EFD24727.1| V-type sodium ATPase, B subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 472 Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 100/368 (27%), Positives = 178/368 (48%), Gaps = 18/368 (4%) Query: 45 LGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGR--FRISPSACWC 102 +G+ V + ++ GQ+++I D+ I G ++ + V R +I Sbjct: 35 IGEIVKIESNFGEDYGQILQIVDDLCVIQVFGETMGLAPNNTVVWLERDVVKIPLGIALQ 94 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N PIDG+ + + I R+ + +TGI ID+ L GQ Sbjct: 95 GRILNGRAMPIDGEGPISCIEKWAPIQGNAINPWRRKSPHEFIETGISTIDLMNTLVKGQ 154 Query: 163 RIGVFAGSGIGKSTLLSM---FARSDCFDK------VIISLVGERGREVREFIEDYL-GD 212 ++ +F GSG+ L + +AR+ V+ + +G RE F E + Sbjct: 155 KLPIFTGSGLPADKLAAQIVKYARTPATSADSSPFMVVFAALGITQREASYFREAFRESG 214 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIAT 271 ++ + V + + I R + P A+T+AEYF+ KG +VL++L + + ++REI++ Sbjct: 215 SIYRGVFFFNLAGDPSIERILTPRMALTVAEYFAFEKGYDVLVVLTDMLHYCEALREISS 274 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 E+P RG+P+ ++S+L + ER G KG+IT + V + D+ P+ D I Sbjct: 275 AREEIPGRRGFPSYMYSDLASIYERAGCISGIKGSITQIPIVTMPDDDLTHPVPDLTGYI 334 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRFEET 386 +G IV++R L +G YPP+D L+S+SRL +K + + L + L RF++ Sbjct: 335 TEGQIVMDRELHGKGIYPPIDVLSSLSRLMNKGIGEGSTVPEHRSLSNQLYAAYGRFKDL 394 Query: 387 RDIRLIGG 394 ++ I G Sbjct: 395 VRLKTIIG 402 >gi|290559098|gb|EFD92467.1| H+transporting two-sector ATPase alpha/beta subunit central region [Candidatus Parvarchaeum acidophilus ARMAN-5] gi|290559266|gb|EFD92603.1| H+transporting two-sector ATPase alpha/beta subunit central region [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 459 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 99/351 (28%), Positives = 174/351 (49%), Gaps = 18/351 (5%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ N ++ + G ++ D ++F F++ S GRV + LG+P DG Sbjct: 43 GQVLATNEEVTIVQVFGETTGMNTKDTKVLFKGTTFKMPVSMDMIGRVFDGLGRPRDGGI 102 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + D +I R+ + +TGI ID L GQ++ +F+GSG+ + L Sbjct: 103 PVFSED-KRDINGNPINPYAREEPSEFVQTGISSIDCMNTLVRGQKLPIFSGSGLSHNKL 161 Query: 178 LS-------MFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + + A + F V+ +G + FI ++ L+KSV+ + + + + Sbjct: 162 AAQIVKQAKILAEKEGF-YVVFGGIGINSEDANFFINEFQNSGALEKSVIFLNLAADPSM 220 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R + P +T AEY + KG +V+++L +T +A ++REI+ E+P RGYP +++ Sbjct: 221 ERVILPRLVLTTAEYLAYEKGAHVMVVLTDMTNYAEALREISAARDEVPGRRGYPGYMYT 280 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L + ER G + +KG++T + + + D+ PI D I +G IV++RSL + G Y Sbjct: 281 DLSSIFERAGKVKGKKGSVTQLPILTMPSDDITHPIPDLTGYITEGQIVMSRSLDKSGIY 340 Query: 349 PPVDPLASVSRLADK-----AWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 P VD L S+SRL ++ + D K + + R +E R + I G Sbjct: 341 PEVDVLLSLSRLMNQGVGKGSTREDHKNVSDQMYAAYARGKEIRSLTEIVG 391 >gi|228017198|gb|ACP52018.1| ATP synthase CF1 beta subunit [Pinus leiophylla var. chihuahuana] Length = 492 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 164/319 (51%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDAGITSAIHRPAPAFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|307343714|emb|CBJ19274.1| atpD synthase beta subunit [Micromonospora sp. CR21] Length = 302 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|156530165|gb|ABU75179.1| AtpB [Pierreodendron africanum] Length = 498 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + +TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTILSILETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNERDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|2104727|gb|AAB64417.1| V-ATPase B subunit [Desulfurococcus sp. SY] Length = 465 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 104/359 (28%), Positives = 180/359 (50%), Gaps = 22/359 (6%) Query: 19 LVVQGGYISSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYIC 73 +++ G S+++ +Y + + + V G+ V + GQV+ R NL IV + Sbjct: 1 MLMPGMEYSTVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVF 60 Query: 74 PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMS 130 ++ + F ++ S GR+ N +GKPIDG + + D+ ++ Sbjct: 61 EGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------ 184 V A R ++ TGI ID L GQ++ +F+GSG+ + L + AR Sbjct: 121 PVARAYPRDFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGE 176 Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242 + F V+ + +G E F + + ++++V+ + +D+ I R + P A+T+A Sbjct: 177 EEQF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235 Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 EY + D VL+IL +T +A ++REI+ E+P RGYP ++++L + ER G Sbjct: 236 EYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERGGRVR 295 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 +KG+IT + + + D+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354 >gi|307343736|emb|CBJ19285.1| atpD synthase beta subunit [Micromonospora sp. SGA5] Length = 315 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 7 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 66 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 67 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 126 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 127 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 184 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + + ++ + + Sbjct: 185 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 244 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 245 ILQRYKDLQDIIAILG 260 >gi|254797107|ref|YP_003081945.1| ATP synthase F1, beta subunit [Neorickettsia risticii str. Illinois] gi|254590344|gb|ACT69706.1| ATP synthase F1, beta subunit [Neorickettsia risticii str. Illinois] Length = 474 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 92/306 (30%), Positives = 161/306 (52%), Gaps = 17/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR+ N +G+ IDG + + + I ++ PP + Q +TGI+VID+ P G Sbjct: 88 GRIFNVVGEIIDGGGPVPEPNKVSSIYAE-PPKFDMQSTSSEILETGIKVIDLLAPYSKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL---- 214 ++G+F G+G+GK+ L+ + + + + VGER RE + + + + Sbjct: 147 GKVGLFGGAGVGKTVLIMELINNIAKAYGGFSVFAGVGERTREGNDLYNEMVESGVINKE 206 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269 K V+V +E P R ++A+T+AEYF K G +VL +D+I RF + E+ Sbjct: 207 HPEKSKVVLVYGQMNEPPGARAKVAMSALTMAEYFRDKEGQDVLFFVDNIFRFTQAGAEL 266 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +T G +P A GY ++ +++ RL ERI + + G+IT+V ++ V D+ DP + Sbjct: 267 STLLGRIPSAVGYQPTLATDMGRLQERI--TSTKHGSITSVQAIYVPADDITDPAPATSF 324 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VD LAS ++ L+ + + ++ + ++ ++ +D Sbjct: 325 AHLDSTTVLSRQVAEAGIYPAVDALASSAQILSPEVLGQEHYEVAQKVKGILQSYKSLQD 384 Query: 389 IRLIGG 394 I I G Sbjct: 385 IIAILG 390 >gi|183206610|gb|ACC54503.1| ATP synthase beta subunit [Craterocapsa tarsodes] Length = 476 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 160/312 (51%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 198 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + S + + S+ + R Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSNEHYETAQSVKQTLQR 376 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 377 YKELQDIITILG 388 >gi|125974753|ref|YP_001038663.1| V-type ATP synthase subunit B [Clostridium thermocellum ATCC 27405] gi|256005236|ref|ZP_05430203.1| H(+)-transporting two-sector ATPase [Clostridium thermocellum DSM 2360] gi|281418778|ref|ZP_06249797.1| H(+)-transporting two-sector ATPase [Clostridium thermocellum JW20] gi|171769991|sp|A3DHP1|VATB_CLOTH RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|125714978|gb|ABN53470.1| Sodium-transporting two-sector ATPase [Clostridium thermocellum ATCC 27405] gi|255990787|gb|EEU00902.1| H(+)-transporting two-sector ATPase [Clostridium thermocellum DSM 2360] gi|281407862|gb|EFB38121.1| H(+)-transporting two-sector ATPase [Clostridium thermocellum JW20] gi|316941887|gb|ADU75921.1| H+transporting two-sector ATPase alpha/beta subunit central region [Clostridium thermocellum DSM 1313] Length = 460 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 158/316 (50%), Gaps = 26/316 (8%) Query: 98 SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 S GRV + +GKP+DG D L L M ++ P+ + +TGI Sbjct: 82 SMDMLGRVFSGMGKPLDGGPNIIPDKRLDINGLPMNPAARNYPS-------EFIQTGISA 134 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREF 205 ID L GQ++ +F+GSG+ + L + AR +D V+ + VG E F Sbjct: 135 IDGLNTLVRGQKLPIFSGSGLPHAQLAAQIARQAKVLGTDSKFAVVFAAVGITFEEADYF 194 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263 I D+ + ++V+ + +++ I R P A+T AEY + KG +VL+I+ IT +A Sbjct: 195 ISDFKRTGAIDRTVLFINLANDPAIERISTPRMALTAAEYLAFDKGMHVLVIITDITNYA 254 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 ++RE++ E+P RGYP ++++L + ER G +G+IT + + + D+ P Sbjct: 255 EALREVSAARKEVPGRRGYPGYLYTDLATIYERAGRRIDSEGSITLIPILTMPEDDKTHP 314 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTH 378 I D I +G I+L+R L +G PP+D L S+SRL DK D ++ L Sbjct: 315 IPDLTGYITEGQIILSRELHRKGVTPPIDVLPSLSRLKDKGIGKGKTREDHADTMNQLFA 374 Query: 379 LIHRFEETRDIRLIGG 394 R +E +++ +I G Sbjct: 375 AYARGKEAKELAVILG 390 >gi|119350519|gb|ABL63210.1| AtpB [Neochloris aquatica] Length = 393 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ +D + + ++ I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEAVDNMGPVQNME-TLPIHRTAPAFVDLDTRLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------IEDY 209 +IG+F G+G+GK+ L+ + +S+ VGER RE + +E Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIVEKN 157 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 L D+ K +V +E P R LTA+T+AEYF +VL +D+I RF + E Sbjct: 158 LSDS--KVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLFFIDNIFRFVQAGAE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W EK + S+ + R++E Sbjct: 274 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEKHYECAQSVKRTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|108773232|ref|YP_635746.1| CF1 beta subunit of ATP synthase [Chara vulgaris] gi|118573519|sp|Q1ACK1|ATPB_CHAVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|77157888|gb|ABA61929.1| CF1 beta subunit of ATP synthase [Chara vulgaris] Length = 493 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S+ + + PA + + F+TGI+V+D+ P Sbjct: 105 LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 222 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 340 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|19033061|gb|AAL83515.1|AF408787_1 ATP synthase beta subunit [Tolypella prolifera] Length = 402 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 QDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|307343690|emb|CBJ19262.1| atpD synthase beta subunit [Micromonospora sp. GUI23] Length = 298 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + + ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGPEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|307343622|emb|CBJ19228.1| atpD synthase beta subunit [Micromonospora coxensis] Length = 302 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ S + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVASEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|307343616|emb|CBJ19225.1| atpD synthase beta subunit [Micromonospora citrea] Length = 298 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|170293975|gb|ACB13081.1| ATP synthase beta subunit [Ulva intestinalis] Length = 366 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 158/307 (51%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+P+DG + + S+ I P ++ F+TGI+V+D+ P G Sbjct: 21 LGRIFNVVGQPVDGLEDAAHEN-SLPIHRSAPAFVDLDTQLSIFETGIKVVDLLAPYRRG 79 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ D Sbjct: 80 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIQED 139 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 140 NISESKVALVYGQMNEPPGARMRVALTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 199 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 200 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 257 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV--SSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + R++E + Sbjct: 258 AHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYTCAQNVKETLQRYKELQ 316 Query: 388 DIRLIGG 394 DI I G Sbjct: 317 DIIAILG 323 >gi|154483904|ref|ZP_02026352.1| hypothetical protein EUBVEN_01609 [Eubacterium ventriosum ATCC 27560] gi|149735395|gb|EDM51281.1| hypothetical protein EUBVEN_01609 [Eubacterium ventriosum ATCC 27560] Length = 459 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 99/330 (30%), Positives = 176/330 (53%), Gaps = 24/330 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102 +F ++ G LG++I I D I E +SL + L H +SP Sbjct: 31 EFSINDGAEK-RLGRIIEIYEDKAIIQVFEGSEGMSLTNTHTKLTGHPMEVALSPE--IL 87 Query: 103 GRVINALGKPIDGDDSL--GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR N +GKPIDG + K D++ + ++ V +R+ +TGI ID T L Sbjct: 88 GRTFNGIGKPIDGLAPIVGEKRDVNGKPLNPV----SREYPRNYIRTGISAIDGLTTLIR 143 Query: 161 GQRIGVFAGSGIGKSTLLSMFARS-----DCFDK--VIISLVGERGREVREFIEDYLGDN 213 GQ++ +F+G+G+ L + D +K V+ + +G + +V +F + ++ Sbjct: 144 GQKLPIFSGNGLPHDQLAAQLVNQSSLGDDTDEKFAVVFAAMGVK-NDVADFFKRSFEES 202 Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L+ +V+ + +++ + R + P A+T+AEY + + D ++L+IL +T +A ++RE++ Sbjct: 203 GALEHTVMFLNMANDPVVERLITPKVALTVAEYLAYEKDMHILVILTDMTTYAEAMREVS 262 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 ++ GE+P +GYP ++SEL + ER G + KG++T + + + D+ PI D Sbjct: 263 SSKGEIPSRKGYPGYLYSELATIYERAGIVKGSKGSVTQIPILTMPNDDITHPIPDLTGY 322 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 I +G I L+RSL +G YPP++ L S+SRL Sbjct: 323 ITEGQITLDRSLNGQGIYPPINVLPSLSRL 352 >gi|119368012|dbj|BAF40501.1| ATP synthase beta subunit [Adenia sp. Tokuoka 261] Length = 488 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 110/365 (30%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D +GQ I + ++ V + E ++ G D++ + GR Sbjct: 42 KGRDTIGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMDVIDTGAPLSVPVGGATLGR 101 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID LG D + I P + + F+TGI+V+D+ P G Sbjct: 102 IFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLETKFSIFETGIKVVDLLAPYRRGG 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 218 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF NVLL +D+I RF + E++ Sbjct: 219 ITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEVS 278 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S L + A+ + + + R++E +DI Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGAEHYQTAQRVKQTLQRYKELQDI 396 Query: 390 RLIGG 394 I G Sbjct: 397 IAILG 401 >gi|84999258|ref|XP_954350.1| ATP synthase beta chain, mitochondrial precursor [Theileria annulata] gi|65305348|emb|CAI73673.1| ATP synthase beta chain, mitochondrial precursor, putative [Theileria annulata] Length = 583 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 106/345 (30%), Positives = 168/345 (48%), Gaps = 29/345 (8%) Query: 75 VGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 +G E + G V G I GR++N G IDG + K + + I P Sbjct: 157 MGATEGLMRGQEVLDTGSPITIPVGTATLGRIMNVTGDAIDGFGPI-KSEHQLPIHRPAP 215 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---- 189 ++ E TGI+V+D+ P G +IG+F G+G+GK T+L M ++ +K Sbjct: 216 TFEEQKSDEALLITGIKVVDLLAPYAKGGKIGLFGGAGVGK-TVLIMELINNVANKHGGY 274 Query: 190 VIISLVGERGREVREFIEDYL--------------GDNL----KKSVVVVATSDESPILR 231 I + VGER RE E + + GD K+ +V +E P R Sbjct: 275 SIFAGVGERTREGNELYHEMMSTGVIKRALKPNGKGDEADFTGSKASLVYGQMNEPPGAR 334 Query: 232 KMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 LT +T+AEYF + +VLL +D+I RF + E++ G +P A GY ++ ++L Sbjct: 335 ARVALTGLTVAEYFRDEQNQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDL 394 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 L ERI + +KG+IT+V ++ V D+ DP + + LD VL+R +AE G YP Sbjct: 395 GSLQERI--TTTKKGSITSVQAIYVPADDITDPAPATTFTHLDATTVLSRQIAELGIYPA 452 Query: 351 VDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VDPL S SR+ + + V+ ++ ++ ++ +DI I G Sbjct: 453 VDPLDSTSRMLSSHIVGERQYNVARAVQKILQDYKSLQDIIAILG 497 >gi|11467696|ref|NP_050748.1| ATP synthase CF1 beta subunit [Guillardia theta] gi|5915725|sp|O78491|ATPB_GUITH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|3603021|gb|AAC35682.1| ATP synthase CF1 subunit b [Guillardia theta] Length = 475 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 158/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D GD +L D ++ I P + F+TGI+V+D+ P Sbjct: 88 ATLGRIFNVLGQPVDNMGDVAL---DQTLPIHRGSPAFTQLETKPSIFETGIKVVDLLAP 144 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 145 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 203 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 204 VINESNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 261 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ D Sbjct: 262 VQAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTTEGSITSIQAVYVPADDLTD 319 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + S LD VL+R+LA +G YP VDPL S S + E ++ + Sbjct: 320 PAPATTFSHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQINIVGQEHYSCAQNVKETLQ 379 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 380 RYKELQDIIAILG 392 >gi|307343640|emb|CBJ19237.1| atpD synthase beta subunit [Micromonospora lupini] Length = 298 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|88608676|ref|YP_506638.1| F0F1 ATP synthase subunit beta [Neorickettsia sennetsu str. Miyayama] gi|118573703|sp|Q2GD08|ATPB_NEOSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|88600845|gb|ABD46313.1| ATP synthase F1, beta subunit [Neorickettsia sennetsu str. Miyayama] Length = 474 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 162/306 (52%), Gaps = 17/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR+ N +G+ IDG + + + I ++ PP + Q +TGI+VID+ P G Sbjct: 88 GRIFNVVGEIIDGGGPVPEPNKVSSIYAE-PPRFDMQSTSSEILETGIKVIDLLAPYSKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYLGDN- 213 ++G+F G+G+GK+ L+ + + + + VGER RE E +E + D Sbjct: 147 GKVGLFGGAGVGKTVLIMELINNIAKAYGGFSVFAGVGERTREGNDLYSEMVESGVIDKE 206 Query: 214 ---LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREI 269 K V+V +E P R ++A+T+AEYF K G +VL +D+I RF + E+ Sbjct: 207 HPEKSKVVLVYGQMNEPPGARAKVAMSALTMAEYFRDKEGQDVLFFVDNIFRFTQAGAEL 266 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +T G +P A GY ++ +++ RL ERI + + G+IT+V ++ V D+ DP + Sbjct: 267 STLLGRIPSAVGYQPTLATDMGRLQERI--TSTKNGSITSVQAIYVPADDITDPAPATSF 324 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388 + LD VL+R +AE G YP VD LAS ++ L+ + + ++ + ++ ++ +D Sbjct: 325 AHLDSTTVLSRQVAEAGIYPAVDALASSAQILSPEVLGQEHYEVAQKVKGILQSYKSLQD 384 Query: 389 IRLIGG 394 I I G Sbjct: 385 IIAILG 390 >gi|326526259|dbj|BAJ97146.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 494 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 93/305 (30%), Positives = 156/305 (51%), Gaps = 17/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G PID + + I + P + + TGI+V+D+ P G Sbjct: 106 GRIMNVIGDPIDERGPI-ETKKRYPIHREAPSFDEQGSGAEILITGIKVVDMLAPYARGG 164 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L++ A++ V VGER RE + + + + Sbjct: 165 KIGLFGGAGVGKTVVIQELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVIKIN 223 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 + ++ +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 224 QPGSRCALIYGQMNEPPGARARVGLTGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVS 283 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 284 ALLGRIPSAVGYQPTLATDLGALQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFA 341 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R+L E G YP VDPL S SR+ D ++ ++ + L+ ++ +DI Sbjct: 342 FLDATTVLSRALTELGIYPAVDPLDSTSRILDPTVVGEKHYQVARGVQKLLQDYKSLQDI 401 Query: 390 RLIGG 394 I G Sbjct: 402 IAILG 406 >gi|307343646|emb|CBJ19240.1| atpD synthase beta subunit [Micromonospora nigra] Length = 307 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 10 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 69 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 70 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 129 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 130 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 187 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + + ++ + + Sbjct: 188 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFEVATEVKR 247 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 248 ILQRYKDLQDIIAILG 263 >gi|307343636|emb|CBJ19235.1| atpD synthase beta subunit [Micromonospora halophytica] Length = 298 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|11465725|ref|NP_053869.1| ATP synthase CF1 beta subunit [Porphyra purpurea] gi|1703717|sp|P51259|ATPB_PORPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|1276725|gb|AAC08145.1| ATP synthase CF1 beta chain [Porphyra purpurea] Length = 475 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + ++ I P + F+TGI+V+D+ P Sbjct: 90 LGRIFNVLGEPVD---NLGPVSSESTLPIHRPAPAFTKLETKPSIFETGIKVVDLLAPYR 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 206 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DNLK+S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 207 EDNLKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 266 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP + Sbjct: 267 EVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTEGSITSIQAVYVPADDLTDPAPAT 324 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + D + + R++E Sbjct: 325 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVGTDHYSTAQEVKSTLQRYKEL 384 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 385 QDIIAILG 392 >gi|326426456|gb|EGD72026.1| ATP synthase subunit beta [Salpingoeca sp. ATCC 50818] Length = 516 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 24/313 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + K + ++ I ++ PP + +TGI+VID+ P G Sbjct: 113 LGRIMNVIGEPIDERGPI-KAESTLPIHAEAPPLTEMEVKPAILETGIKVIDLLAPYAKG 171 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + Sbjct: 172 GKIGLFGGAGVGKTVLIMELINNVAKAHSGYSVFAG-VGERTREGNDLYHEMQEGGVIDL 230 Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-------SSKGDNVLLILDSITRF 262 K +V +E P R LT +T+AE + +G +VL +D+I RF Sbjct: 231 ETPENSKVALVYGQMNEPPGARARVALTGLTVAESLRDLPDPSTGRGRDVLFFIDNIFRF 290 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +++ L ERI + G+IT+V +V V D+ D Sbjct: 291 TQAGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTTFGSITSVQAVYVPADDLTD 348 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIH 381 P + + LD VL+R +AE G YP VDPL S SR+ D A DE + + ++ Sbjct: 349 PAPATTFAHLDATTVLSRGIAELGIYPAVDPLDSASRVLDAAIVGDEHYACARDVQKILQ 408 Query: 382 RFEETRDIRLIGG 394 ++ +DI I G Sbjct: 409 DYKSLQDIIAILG 421 >gi|312137462|ref|YP_004004799.1| ATP synthase, b subunit [Methanothermus fervidus DSM 2088] gi|311225181|gb|ADP78037.1| ATP synthase, B subunit [Methanothermus fervidus DSM 2088] Length = 461 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 92/278 (33%), Positives = 147/278 (52%), Gaps = 15/278 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIR 150 ++ S GR+ + GKPIDG G + E + MN R+ + +TGI Sbjct: 83 KLGVSMDMMGRIFDGTGKPIDG----GPEVIPEEELDITGSPMNPSARKYPAEFIQTGIS 138 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVRE 204 ID L GQ++ +F+GSG+ + L + AR + VI + +G E Sbjct: 139 TIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLTEESEFAVIFTAMGITHEEANF 198 Query: 205 FIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262 F++++ L++ V + +D+ I R M P A+T AEYF+ + D +VL+IL +T + Sbjct: 199 FMKEFERTGALERVTVFMNLADDPAIERIMTPRMALTTAEYFAFEYDMHVLVILTDMTNY 258 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 ++REI+ E+P RGYP ++++L + ER G +KG+IT + +++ D+ Sbjct: 259 CEALREISAAREEVPGRRGYPGYMYTDLASIYERAGRVHGKKGSITQMPILVMPQDDITH 318 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 PI D I +G IVL+R L +G YPPVD L S+SRL Sbjct: 319 PIPDLTGYITEGQIVLSRELHRKGIYPPVDVLPSLSRL 356 >gi|183206536|gb|ACC54466.1| ATP synthase beta subunit [Cyphia elata] Length = 487 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 93 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 149 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 208 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 209 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 268 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 269 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 326 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 327 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 386 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 387 YKELQDIITILG 398 >gi|119350531|gb|ABL63216.1| AtpB [Planctonema sp. M110-1] Length = 393 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 18/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D +G + S+ I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNLGPVGNKE-SLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +N Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEEN 157 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 158 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 217 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ SE+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 218 ALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRD 388 LD VL+R LA +G YP VDPL S S + + W D + + R++E +D Sbjct: 276 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEDHYNCAQLVKETLQRYKELQD 334 Query: 389 IRLIGG 394 I I G Sbjct: 335 IIAILG 340 >gi|307343620|emb|CBJ19227.1| atpD synthase beta subunit [Micromonospora coriariae] gi|307343682|emb|CBJ19258.1| atpD synthase beta subunit [Micromonospora sp. GUI14] Length = 298 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + + ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGPEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|296282406|ref|ZP_06860404.1| F0F1 ATP synthase subunit beta [Citromicrobium bathyomarinum JL354] Length = 489 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 91/311 (29%), Positives = 157/311 (50%), Gaps = 21/311 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+ ID +G + + I ++ P +++ TGI+VID+ P G Sbjct: 97 LGRIMNVIGEAIDERGPIG-AEKTAPIHAEAPEFVDQSTESSILVTGIKVIDLLAPYAKG 155 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + +S+ VGER RE + ++L + Sbjct: 156 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKD 215 Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 K +V +E P R L+ +T+AEYF +G +VL +D+I RF Sbjct: 216 AEGNATSEGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDEEGQDVLFFVDNIFRFTQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 276 AGSEVSALLGRIPSAVGYQPTLATDMGNLQERI--TSTNKGSITSVQAIYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD LNR+++E G YP VDPL S SR+ + +E + + + ++ Sbjct: 334 PATSFAHLDATTTLNRAISELGIYPAVDPLDSTSRVLEPRVVGEEHYETARKVQETLQKY 393 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 394 KSLQDIIAILG 404 >gi|25027871|ref|NP_737925.1| F0F1 ATP synthase subunit beta [Corynebacterium efficiens YS-314] gi|259506262|ref|ZP_05749164.1| ATP synthase F1, beta subunit [Corynebacterium efficiens YS-314] gi|81749543|sp|Q8FQ20|ATPB_COREF RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|23493154|dbj|BAC18125.1| H+-ATPase beta subunit [Corynebacterium efficiens YS-314] gi|259166166|gb|EEW50720.1| ATP synthase F1, beta subunit [Corynebacterium efficiens YS-314] Length = 481 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 99/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNR-QRVEKGFKTGIRVIDIFTPLCHG 161 G V NALG +D LG+ D + + PP+ ++ + + +TGI+VID+ TP G Sbjct: 103 GHVFNALGDCLD-VPGLGR-DGEQWGIHREPPSFDQLEGKTEILETGIKVIDLLTPYVKG 160 Query: 162 QRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLKKS 217 +IG+F G+G+GK+ L+ M R + + + VGER RE + F+E L+ + Sbjct: 161 GKIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLFLEMEEMGVLQDT 220 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G + Sbjct: 221 ALVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRM 280 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 281 PSAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATT 338 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L+RS+A +G YP V+PL S SR+ + + + VS + ++ + +E +DI I G Sbjct: 339 ELDRSIASKGIYPAVNPLTSTSRILEPSIVGERHYEVSQRVIGILQKNKELQDIIAILG 397 >gi|307343680|emb|CBJ19257.1| atpD synthase beta subunit [Micromonospora sp. GUI13] Length = 298 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|163854647|ref|YP_001628945.1| F0F1 ATP synthase subunit beta [Bordetella petrii DSM 12804] gi|190358261|sp|A9HY42|ATPB_BORPD RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|163258375|emb|CAP40674.1| ATP synthase beta chain [Bordetella petrii] Length = 466 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 151/298 (50%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + D I P + +TGI+VID+ P G Sbjct: 91 GRIMDVLGRPIDEAGPI-ESDEKRAIHQTAPRFDELSPSVELLETGIKVIDLVCPFAKGG 149 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + L K Sbjct: 150 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESKVLDKV 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ G +P Sbjct: 209 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILFFVDNIYRYTLAGTEVSALLGRMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 269 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFQHLDSTVV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ + + R++E RDI I G Sbjct: 327 LSRDIAALGIYPAVDPLDSSSRQLDPQVVGEEHYAVARGVQQTLQRYKELRDIIAILG 384 >gi|124112038|ref|YP_001019150.1| CF1 beta subunit of ATP synthase [Chlorokybus atmophyticus] gi|190358288|sp|Q19V65|ATPB_CHLAT RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|124012154|gb|ABD62170.2| CF1 beta subunit of ATP synthase [Chlorokybus atmophyticus] Length = 485 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 163/312 (52%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG + S + + PPA + F+TGI+V+D+ P Sbjct: 97 ATLGRIFNVLGEPVD---NLGPVANKSTLPIHRDPPAFTELDTKLSIFETGIKVVDLLAP 153 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKESK 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSREMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQRVKQTLQR 389 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 390 YKELQDIIAILG 401 >gi|304322983|ref|YP_003795521.1| CF1 beta subunit of ATP synthase [Floydiella terrestris] gi|270048182|gb|ACZ58477.1| CF1 beta subunit of ATP synthase [Floydiella terrestris] Length = 489 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 157/310 (50%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + I P + F+TGI+V+D+ P Sbjct: 98 LGRIFNVLGEPVD---NLGPVNTEEKLPIHRPAPAFTDLDTRLSIFETGIKVVDLLAPYR 154 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----------VREFI 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE R + Sbjct: 155 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESRVIV 214 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHS 265 E+ LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 215 EENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDMNKQDVLLFIDNIFRFVQA 272 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ SE+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 273 GSEVSALLGRMPSAVGYQPTLASEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPSS 330 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R+LA +G YP VDPL S S + DE + + R + Sbjct: 331 VATFAHLDATTVLSRNLAAKGIYPAVDPLDSNSVMLQPYIVGDEHYSCAQRVKGTLQRLK 390 Query: 385 ETRDIRLIGG 394 E DI I G Sbjct: 391 ELNDIIAILG 400 >gi|164566039|gb|ABY61162.1| ATP synthase beta subunit [Angiopteris angustifolia] gi|164566041|gb|ABY61163.1| ATP synthase beta subunit [Angiopteris evecta] gi|164566043|gb|ABY61164.1| ATP synthase beta subunit [Angiopteris sp. MJMC-2008] Length = 394 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ +SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|46360647|gb|AAS89105.1| ATP synthase beta subunit [Anastrophyllum michauxii] Length = 382 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 2 LGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 119 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 178 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R++E Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQRYKE 295 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 296 LQDIIAILG 304 >gi|183206534|gb|ACC54465.1| ATP synthase beta subunit [Lobelia cardinalis] Length = 488 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 209 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 210 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIITILG 399 >gi|56697994|ref|YP_168365.1| F0F1 ATP synthase subunit beta [Ruegeria pomeroyi DSS-3] gi|81819934|sp|Q5LNP1|ATPB_SILPO RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|56679731|gb|AAV96397.1| ATP synthase F1, beta subunit [Ruegeria pomeroyi DSS-3] Length = 474 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 165/320 (51%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGI 149 G + A GR++N +G+P+D + + + + P+ + Q TGI Sbjct: 75 GPISVPVGAATLGRILNVIGEPVDEKGPVNATE--TRAIHQPAPSFDEQSTSSDILVTGI 132 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE--- 201 +VID+ P G +IG+F G+G+GK+ L+ + KV + + VGER RE Sbjct: 133 KVIDLLAPYSKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGND 190 Query: 202 -VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLI 255 E IE + +NL++S V V +E P R LT +T+AE F + G +VL Sbjct: 191 LYHEMIESNVIKLENLEESQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFF 250 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V Sbjct: 251 VDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKAGSITSIQAVYV 308 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374 D+ DP + + LD VL+R+++E G YP VDPL S SR+ D +E ++ Sbjct: 309 PADDLTDPAPATTFAHLDATTVLSRAISELGIYPAVDPLDSSSRILDPQVVGEEHYQVAR 368 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + ++ R++ +DI I G Sbjct: 369 DVQGILQRYKSLQDIIAILG 388 >gi|317969006|ref|ZP_07970396.1| F0F1 ATP synthase subunit beta [Synechococcus sp. CB0205] Length = 486 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + I + P + + K F+TGI+VID+ P Sbjct: 95 ATLGRIFNVLGEPVDEQGPVNT-TTTAPIHREAPKLTDLETKPKVFETGIKVIDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G +IG+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 154 QGGKIGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 213 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 ++L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 214 AEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + DE + ++ + R++E Sbjct: 332 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|325105062|ref|YP_004274716.1| ATP synthase F1 subcomplex beta subunit [Pedobacter saltans DSM 12145] gi|324973910|gb|ADY52894.1| ATP synthase F1 subcomplex beta subunit [Pedobacter saltans DSM 12145] Length = 502 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 103/330 (31%), Positives = 158/330 (47%), Gaps = 42/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GRV N +G IDG + L K + + + PP E TGI+VID+ P G Sbjct: 90 GRVFNVVGDAIDGIEELDKAN--GKSIHNAPPKFEDLSTENEILFTGIKVIDLIEPYAKG 147 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 148 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 207 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D K V +E P R L+ +T+AEYF Sbjct: 208 DEFMHSMENGGWDLSKVDKELMKDSKCTFVFGQMNEPPGARARVALSGLTVAEYFRDGED 267 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G Sbjct: 268 DGQGKDVLFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKRG 325 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ A Sbjct: 326 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPAV 385 Query: 366 SADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 E + + ++ R++E +DI I G Sbjct: 386 VGPEHYACAQRVKEILQRYKELQDIIAILG 415 >gi|2662326|dbj|BAA23755.1| proton-translocating ATPase beta subunit [Streptococcus equinus] Length = 469 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 102/317 (32%), Positives = 161/317 (50%), Gaps = 12/317 (3%) Query: 87 VFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG- 144 VF GR + GRV N LG ID D+ + D E + K PA + Sbjct: 73 VFDTGRPISVPVGKETLGRVFNVLGDTIDLDEPFAE-DAPREPIHKKAPAFDELSTSSEI 131 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ L+ + + IS+ VGER RE Sbjct: 132 LETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTRE 191 Query: 202 VRE-FIEDYLGDNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFSS-KGDNVLLILDS 258 + + E ++K+ +V +E + +M LT +TIAEYF +G +VLL +D+ Sbjct: 192 GNDLYWEMKESGVIEKTAMVFGQRNEPTLGARMRVALTGLTIAEYFRDVEGQDVLLFIDN 251 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +E+ +L ERI + +K + V D Sbjct: 252 IFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERI--TSTKKVLLHQSKPSTVPAD 309 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLT 377 ++ DP + + LD L R L + G YP VDPLAS SR LA + + ++ + + Sbjct: 310 DYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALAPEIVGQEHYEVATEVQ 369 Query: 378 HLIHRFEETRDIRLIGG 394 ++ R+ E +DI I G Sbjct: 370 RVLQRYRELQDIIAILG 386 >gi|307343638|emb|CBJ19236.1| atpD synthase beta subunit [Micromonospora inositola] Length = 302 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKHEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAAEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|183206622|gb|ACC54509.1| ATP synthase beta subunit [Campanula robinsiae] Length = 476 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 110/366 (30%), Positives = 174/366 (47%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + + G V G + GR Sbjct: 29 KGQDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGTPLSVPVGGATLGR 88 Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D S I P ++ F+TGI+V+D+ P G Sbjct: 89 IFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAPYRRGG 145 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 146 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGVINEQ 204 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 205 KFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 265 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDPAPATTF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S L + S D + ++ + R++E +D Sbjct: 323 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDDHYETAQNVKQTLQRYKELQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IITILG 388 >gi|21684905|emb|CAD11579.1| ATP synthase beta subunit [Rostkovia magellanica] Length = 498 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 152/306 (49%), Gaps = 20/306 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+PID +LG D S + + PA E F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGQPID---NLGPVDTSTTFPIHRSAPAFIELNTELSIFQTGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + +S+ VGER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFAGVGERTREGNDLYKEMKESG 220 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP V+PL S S + E + + R+ Sbjct: 339 PATTFAHLDATTVLSRPLAAKGIYPAVNPLDSTSTMLQSNIVGKEHYETAQRVKQTSQRY 398 Query: 384 EETRDI 389 +E +D+ Sbjct: 399 KELQDV 404 >gi|307343628|emb|CBJ19231.1| atpD synthase beta subunit [Micromonospora echinofusca] Length = 302 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|32473392|ref|NP_866386.1| F0F1 ATP synthase subunit beta [Rhodopirellula baltica SH 1] gi|32398072|emb|CAD78167.1| F0F1-ATPase beta chain [Rhodopirellula baltica SH 1] Length = 508 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 103/318 (32%), Positives = 158/318 (49%), Gaps = 14/318 (4%) Query: 81 ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 +S G V GR ++ GRV++ G +D +SL + + + PP +NR Sbjct: 115 LSRGTPVRSCGRSMQVPVGKPLLGRVLDVFGNTLDDGESLKS--VEHRSIHQTPPTINR- 171 Query: 140 RVEKG--FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL--- 194 R+ K F TGI+ ID+ +PL G + G+F G+G+GK+ L++ + ISL Sbjct: 172 RIAKSEVFTTGIKAIDLLSPLERGGKAGLFGGAGVGKTVLITELIHNIVGGHDGISLFCG 231 Query: 195 VGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNV 252 +GER RE E + ++ +V+V +E P R A+T+AE F +V Sbjct: 232 IGERCREAEELYREMGAAGVRDNTVMVFGQMNEPPGARFRVGHAALTMAESFRDDAKQDV 291 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LL++D+I RF + E++ G+LP GY S+ S+L L ERI IT+V + Sbjct: 292 LLLIDNIFRFVQAGMEVSGLLGQLPSRVGYQPSLASDLAELEERI--CTTSDAAITSVQA 349 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371 V V D+ DP A + L +VL+R A EG YP +DPL S S + D K Sbjct: 350 VYVPADDFTDPSAVHTFAHLSATVVLSRKRASEGLYPAIDPLKSTSEMMLPGVVGDRHYK 409 Query: 372 LVSSLTHLIHRFEETRDI 389 S++ + +EE +DI Sbjct: 410 TASNVRQTLAGYEELKDI 427 >gi|12585461|sp|Q9HM64|VATB_THEAC RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B Length = 460 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/316 (31%), Positives = 157/316 (49%), Gaps = 13/316 (4%) Query: 60 GQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ R L IV I G + F R+ S GRV N +G+PIDG Sbjct: 43 GQVLDTRKGLAIVQIFGATTGIGTQGTTVKFRGETARLPISEDMLGRVFNGIGEPIDGGP 102 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + + MEI S +R+ + +TGI ID L GQ++ +F+GSG+ + L Sbjct: 103 EIIAKE-RMEITSNAINPYSREEPSEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHNQL 161 Query: 178 LSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + AR S+ F V+ +G E F + L +SV+ + S + + Sbjct: 162 AAQIARQAKVLDSSENF-AVVFGAMGITSEEANYFTNQFRETGALSRSVMFLNLSSDPSM 220 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R + P A+T AEY + KG ++L+IL +T + ++REI+ E+P RGYP +++ Sbjct: 221 ERIILPRIALTTAEYLAFQKGMHILVILTDMTNYCEALREISAAREEVPGRRGYPGYMYT 280 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L + ER G + G+IT + + + GD+ P+ D I +G IV++R L + Y Sbjct: 281 DLSTIYERAGKLKGNNGSITQIPILTMPGDDITHPVPDLTGYITEGQIVISRDLNRKDMY 340 Query: 349 PPVDPLASVSRLADKA 364 P +D L S+SRL ++ Sbjct: 341 PGIDVLLSLSRLMNQG 356 >gi|85709193|ref|ZP_01040259.1| ATP synthase beta subunit [Erythrobacter sp. NAP1] gi|85690727|gb|EAQ30730.1| ATP synthase beta subunit [Erythrobacter sp. NAP1] Length = 485 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 91/311 (29%), Positives = 157/311 (50%), Gaps = 21/311 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+ ID +G D++ I ++ P +++ TGI+VID+ P G Sbjct: 93 LGRIMNVVGEAIDERGPVG-ADMTSPIHAEAPAFVDQSTEADILVTGIKVIDLLAPYAKG 151 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + +S+ VGER RE + ++L + Sbjct: 152 GKIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEFLDAGVIAKD 211 Query: 215 ---------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAH 264 K +V +E P R L+ +T+AEYF +G +VL +D+I RF Sbjct: 212 EDGNAISEGSKVALVFGQMNEPPGARARVALSGLTMAEYFRDQEGQDVLFFVDNIFRFTQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ V D+ DP Sbjct: 272 AGSEVSALLGRIPSAVGYQPTLSTDMGNLQERI--TSTTKGSITSVQAIYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD L+R+++E G YP VDPL S SR L + + + + + ++ Sbjct: 330 PATSFAHLDATTTLSRAISELGIYPAVDPLDSTSRVLEPRVVGQEHYETARRVQETLQKY 389 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 390 KSLQDIIAILG 400 >gi|190358734|sp|A2C6Z4|ATPB_PROM3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 488 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + D + I P + F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVTT-DATAPIHRPAPKLTELETKPTVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 SDDLSKSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + + DE + S+ + R++E Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARSVQATLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|154001284|gb|ABS57117.1| ATP synthase beta subunit [Wollemia nobilis] Length = 424 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D LG D + + + PA + + F+TGI+V+D+ Sbjct: 34 GATLGRIFNVLGEPVD---DLGPVDARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLA 90 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + V + S VGER RE + + Sbjct: 91 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 150 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 151 VIQEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + +E + + + R+ Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|307343742|emb|CBJ19288.1| atpD synthase beta subunit [Micromonospora sp. SGA18] Length = 302 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|225569878|ref|ZP_03778903.1| hypothetical protein CLOHYLEM_05972 [Clostridium hylemonae DSM 15053] gi|225161348|gb|EEG73967.1| hypothetical protein CLOHYLEM_05972 [Clostridium hylemonae DSM 15053] Length = 457 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 97/315 (30%), Positives = 161/315 (51%), Gaps = 13/315 (4%) Query: 61 QVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPI-DGDD 117 +V+ IN + +V + G +S + F + S GRV + LG+PI DG + Sbjct: 43 KVLEINGNDALVQLFESATGINLSNSKVRFLGRSMELGVSGDMLGRVFDGLGRPIDDGPE 102 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + + + P A R E+ +TG+ ID L GQ++ +F+ SG+ + L Sbjct: 103 ILPEERRDINGLPMNPAA--RSYPEEFIQTGVSAIDGLNTLVRGQKLPIFSASGLPHANL 160 Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 + AR +D V+ + +G E F+E + + ++V+ V +++ I Sbjct: 161 AAQIARQAKVRGTDENFAVVFAAMGITFEESNFFVESFKETGAIDRTVLFVNLANDPAIE 220 Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R P A+T AEY + + D +VL+IL IT +A ++RE++ E+P RGYP ++++ Sbjct: 221 RISTPRMALTAAEYLAFEKDMHVLVILTDITNYADALREVSAARKEVPGRRGYPGYMYTD 280 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 L L ER G +KG+IT + + + D+ PI D I +G I+L+R L +G P Sbjct: 281 LASLYERAGRQNGKKGSITMIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYRKGIQP 340 Query: 350 PVDPLASVSRLADKA 364 P+D L S+SRL DK Sbjct: 341 PIDVLPSLSRLKDKG 355 >gi|167758634|ref|ZP_02430761.1| hypothetical protein CLOSCI_00974 [Clostridium scindens ATCC 35704] gi|167663830|gb|EDS07960.1| hypothetical protein CLOSCI_00974 [Clostridium scindens ATCC 35704] Length = 457 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 95/311 (30%), Positives = 160/311 (51%), Gaps = 16/311 (5%) Query: 98 SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + LG+PID G + L + + + P A R E+ +TG+ ID Sbjct: 82 SGDMLGRVFDGLGRPIDDGPEILPEERRDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ +F+ SG+ + L + AR +D V+ + +G E F+E + Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTDENFAVVFAAMGITFEESNFFVESFK 199 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268 + ++V+ + +++ I R P A+T AEY + + D +VL+IL IT +A ++RE Sbjct: 200 ETGAIDRTVLFINLANDPAIERISTPRMALTAAEYLAFEKDMHVLVILTDITNYADALRE 259 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ E+P RGYP ++++L L ER G + +KG+IT + + + D+ PI D Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKKGSITMIPILTMPEDDKTHPIPDLT 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383 I +G I+L+R L +G PP+D L S+SRL DK AD ++ L R Sbjct: 320 GYITEGQIILSRDLYRKGVQPPIDVLPSLSRLKDKGIGEGKTRADHSNTLNQLFAAYARG 379 Query: 384 EETRDIRLIGG 394 ++ +++ I G Sbjct: 380 KDAKELMTILG 390 >gi|119350529|gb|ABL63215.1| AtpB [Planctonema lauterbornii] Length = 393 Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 156/306 (50%), Gaps = 18/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D +G + S+ I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNLGPVGNKE-SLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +N Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEEN 157 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 158 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 217 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ SE+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 218 ALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRD 388 LD VL+R LA +G YP VDPL S S + + W D + + R++E +D Sbjct: 276 HLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEDHYNCAQLVKETLQRYKELQD 334 Query: 389 IRLIGG 394 I I G Sbjct: 335 IIAILG 340 >gi|254553613|gb|ACT67265.1| ATP synthase CF1 beta subunit [Joinvillea plicata] Length = 491 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 22/307 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 213 Query: 213 ------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 214 GVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 273 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 331 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + + R Sbjct: 332 APATTFAHLDATTVLSRGLAAKGXYPAVDPLDSTSTMLQPRIVGEEHYEXAQRVKQTLXR 391 Query: 383 FEETRDI 389 ++E +DI Sbjct: 392 YKELQDI 398 >gi|307343718|emb|CBJ19276.1| atpD synthase beta subunit [Micromonospora sp. CR36] Length = 306 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|305671679|gb|ADM63149.1| ATP synthase beta subunit [Centranthus ruber] Length = 489 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTRFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 329 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + A D+ + + + R Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPAIVGDKHYETAQRVKQTLQR 389 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 390 YKELQDIIAILG 401 >gi|170293967|gb|ACB13077.1| ATP synthase beta subunit [Pedinomonas minor] Length = 367 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D +G D + I P ++ F+TGI+V+D+ P G Sbjct: 21 LGRIFNVLGEPVDNLGPVGAKD-GLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRG 79 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------E 207 +IG+F G+G+GK+ L+ + A++ V + ER RE + E Sbjct: 80 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINE 138 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 139 GNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 196 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 197 SEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 254 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + DE + + + R++E Sbjct: 255 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGDEHYQTAQRVKQTLQRYKE 314 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 315 LQDIIAILG 323 >gi|119487855|ref|ZP_01621352.1| ATP synthase F1, beta subunit [Lyngbya sp. PCC 8106] gi|119455431|gb|EAW36569.1| ATP synthase F1, beta subunit [Lyngbya sp. PCC 8106] Length = 482 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 162/312 (51%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG + + I P + F+TGI+V+D+ P Sbjct: 95 ATLGRIFNVLGEPVD---NLGPVNAETTFSIHRSAPAFTELETKPAVFETGIKVLDLLAP 151 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED- 208 G +IG+F G+G+GK+ L++ A++ V + ER RE +E IE Sbjct: 152 YRRGGKIGLFGGAGVGKTVIMMELVNNIAKAHGGVSVFGGVG-ERTREGNDLYQEMIESG 210 Query: 209 --YLGDNLKKSVVVV-ATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFA 263 L D K + +V +E P R L+A+ +AEYF SK D VLL +D+I RF Sbjct: 211 VINLEDRTKSKIALVYGQMNEPPGARMRVGLSALAMAEYFRDVSKQD-VLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLGTDMGELQERI--TSTKEGSITSVQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R+LA +G YP VDPL S S + + DE + ++ + R Sbjct: 328 APATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQSSVVGDEHYQTARAVQATLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIIAILG 399 >gi|307343716|emb|CBJ19275.1| atpD synthase beta subunit [Micromonospora sp. CR30] Length = 302 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|307343710|emb|CBJ19272.1| atpD synthase beta subunit [Micromonospora sp. GUI63] Length = 302 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|183206532|gb|ACC54464.1| ATP synthase beta subunit [Solenopsis minuta] Length = 498 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTHTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|16081191|ref|NP_393483.1| V-type ATP synthase subunit B [Thermoplasma acidophilum DSM 1728] gi|10639152|emb|CAC11154.1| probable ATP synthase (subunit B) [Thermoplasma acidophilum] Length = 476 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 98/316 (31%), Positives = 157/316 (49%), Gaps = 13/316 (4%) Query: 60 GQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ R L IV I G + F R+ S GRV N +G+PIDG Sbjct: 59 GQVLDTRKGLAIVQIFGATTGIGTQGTTVKFRGETARLPISEDMLGRVFNGIGEPIDGGP 118 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + + MEI S +R+ + +TGI ID L GQ++ +F+GSG+ + L Sbjct: 119 EIIAKE-RMEITSNAINPYSREEPSEFIETGISAIDGMNTLVRGQKLPIFSGSGLPHNQL 177 Query: 178 LSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + AR S+ F V+ +G E F + L +SV+ + S + + Sbjct: 178 AAQIARQAKVLDSSENF-AVVFGAMGITSEEANYFTNQFRETGALSRSVMFLNLSSDPSM 236 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R + P A+T AEY + KG ++L+IL +T + ++REI+ E+P RGYP +++ Sbjct: 237 ERIILPRIALTTAEYLAFQKGMHILVILTDMTNYCEALREISAAREEVPGRRGYPGYMYT 296 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L + ER G + G+IT + + + GD+ P+ D I +G IV++R L + Y Sbjct: 297 DLSTIYERAGKLKGNNGSITQIPILTMPGDDITHPVPDLTGYITEGQIVISRDLNRKDMY 356 Query: 349 PPVDPLASVSRLADKA 364 P +D L S+SRL ++ Sbjct: 357 PGIDVLLSLSRLMNQG 372 >gi|332523630|ref|ZP_08399882.1| ATP synthase alpha/beta chain, C-terminal domain protein [Streptococcus porcinus str. Jelinkova 176] gi|332314894|gb|EGJ27879.1| ATP synthase alpha/beta chain, C-terminal domain protein [Streptococcus porcinus str. Jelinkova 176] Length = 460 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 93/315 (29%), Positives = 160/315 (50%), Gaps = 11/315 (3%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ ++ D +V + G ++ + F ++ S GRV + +G+P+DG Sbjct: 44 GQVLEVHHDKAVVQLFEGSSGINLAKSKVRFTGHPLELAVSEDMVGRVFDGMGRPLDGGP 103 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + ++I + ++R ++ +TGI ID L GQ++ VF+GSG+ + L Sbjct: 104 EL-IAEKFLDIDGQAINPISRDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNEL 162 Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 + AR D V+ + +G E F+ED + +SV+ + +++ I Sbjct: 163 AAQIARQATVLGDDGKFAVVFAAIGITFEEAEFFMEDLRKTGAISRSVLFINLANDPAIE 222 Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R P A+T AEY + KG +VL+I+ +T + ++REI+ E+P RGYP +++ Sbjct: 223 RIATPRIALTTAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTN 282 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 L L ER G + G++T + + + D+ PI D I +G I+L+ +L G P Sbjct: 283 LSTLYERAGRLVGKAGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSHALYNSGLEP 342 Query: 350 PVDPLASVSRLADKA 364 P+D L S+SRL DK Sbjct: 343 PIDILPSLSRLKDKG 357 >gi|283782164|ref|YP_003372919.1| ATP synthase F1, beta subunit [Pirellula staleyi DSM 6068] gi|283440617|gb|ADB19059.1| ATP synthase F1, beta subunit [Pirellula staleyi DSM 6068] Length = 482 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/333 (33%), Positives = 173/333 (51%), Gaps = 23/333 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV N LG+PID + ++ I + P + + F+TGI+VID+ TP G Sbjct: 96 GRVFNLLGEPIDARGPVSAKEM-WPIHREAPKLEDLSTSTELFETGIKVIDLLTPFVRGG 154 Query: 163 RIGVFAGSGIGKSTLLS-MFARSDCFDK--VIISLVGERGREVR----EFIEDYLGDN-- 213 + G+F G+G+GK+ +L + AR + + VGER RE E E +G Sbjct: 155 KAGLFGGAGLGKTVILQELIARVAATHGGYSVFAGVGERTREGTDLWIEMQEAEIGQTGR 214 Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 ++++ +V +E P R L+A+T+AEYF + G + LL +D+I RF+ + E++ Sbjct: 215 KVIEQTCMVFGQMNEPPGARLRVALSALTMAEYFRDTTGKDTLLFVDNIFRFSQAGSEVS 274 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG IT+V +V V D+ DP + Sbjct: 275 ALLGRMPSAVGYQPTLATEMGALQERI--ASTKKGAITSVQAVYVPADDPTDPAPATAFG 332 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD I L RS++E+G YP VDPLAS SR+ D A + + ++ R+ E +DI Sbjct: 333 QLDAFIYLERSISEKGIYPAVDPLASSSRILDPNIVGARHYAIARRVQGILQRYRELQDI 392 Query: 390 RLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I GVD + + VH+ I FL Q Sbjct: 393 IAI----LGVDELSEDDKLVVHRARRIERFLSQ 421 >gi|117926732|ref|YP_867349.1| F0F1 ATP synthase subunit beta [Magnetococcus sp. MC-1] gi|254808157|sp|A0LDA0|ATPB_MAGSM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|117610488|gb|ABK45943.1| ATP synthase F1 subcomplex beta subunit [Magnetococcus sp. MC-1] Length = 474 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 91/314 (28%), Positives = 155/314 (49%), Gaps = 16/314 (5%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 R+ GR++N +G+P D + + ++ I P + + +TGI+VID Sbjct: 79 RVPVGRQTLGRILNVVGEPQDEKGPVETTE-TLPIHRPAPAFAQQATSAEILETGIKVID 137 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL 210 + P G ++G+F G+G+GK+ L+ + + + + VGER RE + + Sbjct: 138 LLAPYAKGGKVGLFGGAGVGKTVLIMELINNVAQEHGGYSVFAGVGERTREGNDLYHEMA 197 Query: 211 GDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITR 261 + K+ ++ +E P R LT +T+AEYF G +VL +D+I R Sbjct: 198 ESGVIDPNSWENSKAALIYGQMNEPPGARARVALTGLTVAEYFRDLGGQDVLFFVDNIFR 257 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ L ERI + + G+IT+V +V V D+ Sbjct: 258 FTQAGAEVSALLGRIPSAVGYQPTLGTDMGALQERI--TTTKTGSITSVQAVYVPADDLT 315 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLI 380 DP + S LD VLNR+++E G YP VDPL S SR+ D K + + ++ Sbjct: 316 DPAPATTFSHLDATTVLNRAISEMGIYPAVDPLDSTSRVLDPKVVGEEHYHTAREVQRIL 375 Query: 381 HRFEETRDIRLIGG 394 ++ +DI I G Sbjct: 376 QTYKSLQDIIAILG 389 >gi|255692505|ref|ZP_05416180.1| ATP synthase F1, beta subunit [Bacteroides finegoldii DSM 17565] gi|260621780|gb|EEX44651.1| ATP synthase F1, beta subunit [Bacteroides finegoldii DSM 17565] Length = 505 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 103/328 (31%), Positives = 161/328 (49%), Gaps = 48/328 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + + + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKGLDR-EGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYAKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE------ 207 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 208 ------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS 247 DY + L+KS V V +E P R L+ +T+AE F Sbjct: 210 GEAFKEGMEKGHWDLSKVDY--NELEKSQVSLVFGQMNEPPGARASVALSGLTVAESFRD 267 Query: 248 KGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 268 AGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TST 325 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 KG+IT+V +V V D+ DP + S LD VL+R + E G YP VDPLAS SR+ D Sbjct: 326 RKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILD 385 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDI 389 E + + ++ R +E +DI Sbjct: 386 PHIVGQEHYDVAQQVKQILQRNKELQDI 413 >gi|156530149|gb|ABU75171.1| AtpB [Odyendyea zimmermannii] Length = 480 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 202 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380 Query: 384 EETRDIRLIGG 394 +E DI I G Sbjct: 381 KELPDIIAILG 391 >gi|313676739|ref|YP_004054735.1| ATP synthase f1 subcomplex beta subunit [Marivirga tractuosa DSM 4126] gi|312943437|gb|ADR22627.1| ATP synthase F1 subcomplex beta subunit [Marivirga tractuosa DSM 4126] Length = 502 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/331 (30%), Positives = 159/331 (48%), Gaps = 42/331 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G IDG D +G + I P + + TGI+VID+ P G Sbjct: 90 GRLFNVIGDAIDGIDQ-PEGKTKLPIHRDAPRFEDLSTSSEVLYTGIKVIDLIEPYSKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + GD Sbjct: 149 KIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIVKYGD 208 Query: 213 NL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF------ 245 K+ V +E P R L+ +T+AEY+ Sbjct: 209 EFMHSMEEGKWDLSKVDKEALKESKATFVFGQMNEPPGARARVALSGLTLAEYYRDGDKD 268 Query: 246 -SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 + G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + + Sbjct: 269 SNETGKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKN 326 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + S LD VL+R +AE G YP VDPL S SR+ +++ Sbjct: 327 GSITSVQAVYVPADDLTDPAPATTFSHLDATTVLSRKIAELGIYPAVDPLDSTSRILERS 386 Query: 365 WSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + ++ R++E +DI I G Sbjct: 387 IVGDEHYDCAQRVKEILQRYKELQDIIAILG 417 >gi|307343612|emb|CBJ19223.1| atpD synthase beta subunit [Micromonospora chersina] Length = 302 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E V++ + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|139388101|ref|YP_001123293.1| ATPase beta subunit [Barbarea verna] gi|190358259|sp|A4QKB2|ATPB_BARVE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134286492|dbj|BAF50117.1| ATPase beta subunit [Barbarea verna] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|88797167|ref|ZP_01112757.1| ATP synthase subunit B [Reinekea sp. MED297] gi|88780036|gb|EAR11221.1| ATP synthase subunit B [Reinekea sp. MED297] Length = 466 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 93/305 (30%), Positives = 155/305 (50%), Gaps = 15/305 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID + + S+ I + P + ++ +TGI+VID+ P G Sbjct: 83 LGRIMNVLGEPIDERGEIQTDERSV-IHADAPSYAEQAHSQEILETGIKVIDLVCPFAKG 141 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL---- 214 ++G+F G+G+GK+ + + + +S+ VGER RE +F + + Sbjct: 142 GKVGLFGGAGVGKTVNMLELINNIATEHSGLSVFAGVGERTREGNDFYHEMSDAGVIQLE 201 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ Sbjct: 202 KLEESKVAMVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVS 261 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + Sbjct: 262 ALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKNGSITSVQAVYVPADDLTDPSPATTFA 319 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D + D + ++ +++E +DI Sbjct: 320 HLDATVVLSRDIAALGIYPAVDPLDSSSRQLDPQIIGNDHYNTARGVQGVLQKYKELKDI 379 Query: 390 RLIGG 394 I G Sbjct: 380 IAILG 384 >gi|56236584|gb|AAV84659.1| ATP synthase beta subunit [Cephalotaxus harringtonia] Length = 423 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG G L+ + + PA + + F+TGI+V+D+ P Sbjct: 35 TTLGRIFNVLGEPVD---DLGPVGALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAP 91 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 92 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 150 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 151 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 210 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 268 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + +E + + + R+ Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|150035735|gb|ABR67213.1| ATP synthase beta subunit [Joinvillea plicata] Length = 427 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 34 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 90 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 91 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 149 Query: 213 ------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 150 GVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 209 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 210 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 267 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + + R Sbjct: 268 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQR 327 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 328 YKELQDIIAILG 339 >gi|329766069|ref|ZP_08257628.1| V-type ATP synthase subunit B [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137340|gb|EGG41617.1| V-type ATP synthase subunit B [Candidatus Nitrosoarchaeum limnia SFB1] Length = 461 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 163/309 (52%), Gaps = 20/309 (6%) Query: 102 CGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV + LG+P DG D + D ++I + R+ + +TG+ VID L Sbjct: 90 LGRVFDGLGRPKDGLPDPIA--DKFIDINGEPMNPEQREYPKDFIQTGVSVIDGMITLVR 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN 213 GQ++ +F+GSG+ + L + AR D F V+ + +G + E E+ L ++ Sbjct: 148 GQKLPIFSGSGMSHNILAAQIARQASVVGTKDDF-AVVFAAIGVQYSEA-EYFRRSLEES 205 Query: 214 --LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270 LK+SV+ + T+D+ I R + P A+T+AEY + G +VL+IL +T +A ++REI+ Sbjct: 206 GALKRSVLFLNTADDPAIERIITPRVALTVAEYLAFDLGMHVLVILTDMTNYAEALREIS 265 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P +GYP ++++L + ER G KG++T V + + D+ PI D Sbjct: 266 AAREEVPGRKGYPGYLYTDLSTIYERAGKLNGRKGSVTQVPILSMPSDDITHPIPDLTGY 325 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEE 385 I +G +VL R L +G YPP++ L S+SRL + + AD ++ + + R +E Sbjct: 326 ITEGQVVLGRDLFRQGVYPPINILMSLSRLMKDGIGEGSTRADHSEVSNQVYDAYSRAQE 385 Query: 386 TRDIRLIGG 394 R + I G Sbjct: 386 VRALAGIVG 394 >gi|113910794|gb|ABI48129.1| ATPase beta subunit [Scapania nemorea] Length = 470 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|15425572|emb|CAC60324.1| ATP synthase beta subunit [Dialypetalum sp. Gustafsson 244] Length = 495 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 101 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 216 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 217 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 276 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 277 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 334 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 335 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 394 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 395 YKELQDIITILG 406 >gi|164566127|gb|ABY61206.1| ATP synthase beta subunit [Danaea nodosa] Length = 394 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSSPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDRYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSSML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|139389103|ref|YP_001123821.1| ATP synthase CF1 beta subunit [Nasturtium officinale] gi|190358687|sp|A4QLU0|ATPB_NASOF RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134287026|dbj|BAF50645.1| ATPase beta subunit [Nasturtium officinale] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGSPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|114762051|ref|ZP_01441519.1| F0F1 ATP synthase subunit beta [Pelagibaca bermudensis HTCC2601] gi|114545075|gb|EAU48078.1| F0F1 ATP synthase subunit beta [Roseovarius sp. HTCC2601] Length = 474 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 161/314 (51%), Gaps = 28/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIF 155 GR++N +G+P+D +G + E + + P + Q + TGI+VID+ Sbjct: 84 ATLGRILNVVGEPVDE-----QGPVEAEEYRAIHQPAPEFDEQATDTEILVTGIKVIDLL 138 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFI 206 P G +IG+F G+G+GK+ L+ + KV + + VGER RE E I Sbjct: 139 APYSKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMI 196 Query: 207 EDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261 E + DNL S V V +E P R LT +T+AE F + G +VL +D+I R Sbjct: 197 ESNVIKPDNLSDSQVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFR 256 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ + ERI + + G+IT++ +V V D+ Sbjct: 257 FTQAGSEVSALLGRIPSAVGYQPTLATDMGAMQERI--TSTKNGSITSIQAVYVPADDLT 314 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLI 380 DP + + LD VLNR+++E G YP VDPL S SR+ D E V+ + ++ Sbjct: 315 DPAPATTFAHLDATTVLNRAISELGIYPAVDPLDSNSRILDPQVVGQEHYDVAREVQGIL 374 Query: 381 HRFEETRDIRLIGG 394 R++ +DI I G Sbjct: 375 QRYKSLQDIIAILG 388 >gi|89053540|ref|YP_508991.1| F0F1 ATP synthase subunit beta [Jannaschia sp. CCS1] gi|118573688|sp|Q28TJ6|ATPB_JANSC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|88863089|gb|ABD53966.1| ATP synthase F1 subcomplex beta subunit [Jannaschia sp. CCS1] Length = 474 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 161/308 (52%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + + I P ++ + TGI+V+D+ P G Sbjct: 86 LGRILNVVGEPVDEGGPV-DAEERRGIHQDAPEFADQSTEAEVLVTGIKVVDLLAPYSKG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGRE----VREFIED--YL 210 +IG+F G+G+GK+ L+ + KV + + VGER RE E IE + Sbjct: 145 GKIGLFGGAGVGKTVLIMELINN--IAKVHSGVSVFAGVGERTREGNDLYHEMIESGVIV 202 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIR 267 DNL +S +V +E P R L+ +T+AE F + G +VL +D+I RF + Sbjct: 203 PDNLPESKIALVYGQMNEPPGARMRIALSGLTLAEQFRDATGADVLFFIDNIFRFTQAGS 262 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ + ERI + ++G+IT++ +V V D+ DP + Sbjct: 263 EVSALLGRIPSAVGYQPTLATDMGTMQERI--TSTKRGSITSIQAVYVPADDLTDPAPAT 320 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 + LD VL+R+++E G YP VDPL S SRL D DE V+ + ++ R++ Sbjct: 321 TFAHLDATTVLSRAISELGIYPAVDPLDSSSRLMDPTIVGDEHYQVARDVQGILQRYKSL 380 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 381 QDIIAILG 388 >gi|75330509|sp|Q8MBQ4|ATPB_IPOCC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21633251|gb|AAM52100.1| ATP synthase beta subunit [Ipomoea coccinea] Length = 490 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + S I P + F+TGI+V+D+ P Sbjct: 102 GSTLGRIFNVLGQPVDNLGPVNTNTTS-PIHKSAPAFIQLDTKLSIFETGIKVVDLLPPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G G+GK+ L+ + +S+ G G RE + YL Sbjct: 161 RRGGKIGLFGGXGVGKTLLIMELINNIAKAHGGLSVFGGVGERTREGNDLYLEMKESGVI 220 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 221 NEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|56236582|gb|AAV84658.1| ATP synthase beta subunit [Araucaria bidwillii] Length = 424 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 A GR+ N LG+P+D LG + + + + PA + + F+TGI+V+D+ Sbjct: 34 AATLGRIFNVLGEPVD---DLGPVNARAKSPIHRAAPAFTQLDTKFSIFETGIKVVDLLA 90 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + V + S VGER RE + + Sbjct: 91 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 150 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 151 VIQEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + +E + + + R+ Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|221633211|ref|YP_002522436.1| ATP synthase F1 subunit beta [Thermomicrobium roseum DSM 5159] gi|221156187|gb|ACM05314.1| ATP synthase F1, beta subunit [Thermomicrobium roseum DSM 5159] Length = 473 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 102/302 (33%), Positives = 168/302 (55%), Gaps = 15/302 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCH 160 GR+ N +G+PID + GD + + P+ Q + + F+TG++VID+ P Sbjct: 93 LGRIFNVVGEPIDEQGPV-PGDAPRWPIHRPAPSFEEQSTQVEVFETGLKVIDLVAPFTK 151 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYLGDN 213 G ++GVF G+G+GK+ ++ R+ + S+ VGER RE RE E + D Sbjct: 152 GGKVGVFGGAGVGKTVIIMELIRNIAAEHGGYSVFCGVGERTREGTQLWREMRESGVID- 210 Query: 214 LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNS 273 K+V+V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 211 --KTVLVFGQMNEPPGARLRVGLTGLTMAEYFRDEGRDVLLFIDNIFRFVQAGSEVSVLL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ +++ +L ERI + ++G+IT+V ++ V D++ DP + + LD Sbjct: 269 GRMPSAVGYQPTLGTDMGQLQERI--TSTKRGSITSVQAIYVPADDYTDPAPATTFAHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 I L RS+AE+G YP VDPLAS SR+ D + ++ + ++ R+ + +DI I Sbjct: 327 ATIALERSIAEQGLYPAVDPLASTSRILDPNIVGVEHYRVAREVQRVLQRYRDLQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|126665453|ref|ZP_01736435.1| F0F1 ATP synthase subunit alpha [Marinobacter sp. ELB17] gi|126630081|gb|EBA00697.1| F0F1 ATP synthase subunit alpha [Marinobacter sp. ELB17] Length = 549 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 109/330 (33%), Positives = 164/330 (49%), Gaps = 17/330 (5%) Query: 75 VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSME--IMSK 131 +G E I LG+ V + P GRV++A+G P DG LG E + ++ Sbjct: 112 LGPSEHIRLGEDVRRTRKVISVPVGPALLGRVVDAVGLPRDG---LGVIAAVAEHPVEAE 168 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS-----TLLSMFARSDC 186 P ++R + K TGI+ ID P+ GQR + GK+ T+L+ RSD Sbjct: 169 APGVLSRSAIFKPLATGIKAIDAAVPVGLGQRELIIGDRQTGKTSIAVDTMLNQI-RSDV 227 Query: 187 FDKVIISLVGERGREVREFIEDYL-GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF 245 I +G+RG V I GD + +S+V+ A +E+P L +AP A+T+AEYF Sbjct: 228 I--CIYCAIGQRGDAVSRVIGALKKGDMMARSIVMSAGDEETPGLAYIAPYAAMTMAEYF 285 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE-- 303 +G +VL+I D +T A S RE++ P +P +F RLLER G +E Sbjct: 286 CDQGRDVLIIFDDLTHHARSYRELSLLLRRPPGREAFPGDIFYVHARLLERAGQFTEEVG 345 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+ITA+ V +N + I ++ SI DG I L+ L ++ ++P V SVSR+ K Sbjct: 346 GGSITALPVVETQAENLSAYIPTNLISITDGQIYLSPQLVQKNQFPAVHQGLSVSRVGSK 405 Query: 364 AWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 A S +K+ +L + +FEE D G Sbjct: 406 AQSRALRKVAGNLRVTLSQFEELEDFARFG 435 >gi|55056912|emb|CAF21957.1| ATP synthase beta subunit [Torreya californica] Length = 441 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG G L+ + + PA + + F+TGI+V+D+ P Sbjct: 72 TTLGRIFNVLGEPVD---DLGPVGALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAP 128 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 129 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 187 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 188 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 247 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 248 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 305 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + +E + + + R+ Sbjct: 306 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 365 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 366 KELQDIIAILG 376 >gi|209525902|ref|ZP_03274437.1| ATP synthase F1, beta subunit [Arthrospira maxima CS-328] gi|209493711|gb|EDZ94031.1| ATP synthase F1, beta subunit [Arthrospira maxima CS-328] Length = 485 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 104/312 (33%), Positives = 165/312 (52%), Gaps = 28/312 (8%) Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N +G+PID +LG D + I P ++ + F+TGI+V+D+ P Sbjct: 97 LGRIFNVVGEPID---NLGPVPNDETSSIHRPAPAFVDLETSPSVFETGIKVVDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIE---- 207 G +IG+F G+G+GK+ L++ A++ V + ER RE E IE Sbjct: 154 RGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYNEMIESGVI 212 Query: 208 --DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFA 263 + LG + K +V +E P R L+A+T+AEYF SK D VLL +D+I RF Sbjct: 213 NKEDLGQS--KVALVYGQMNEPPGARMRVALSALTMAEYFRDVSKQD-VLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTKEGSITSIQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+RSLA +G YP VDPL S S + + +E + ++ + R Sbjct: 328 APATTFAHLDATTVLSRSLASKGIYPAVDPLDSSSTMLQPSVVGEEHYQTARAVQSTLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIIAILG 399 >gi|75330428|sp|Q8MBG4|ATPB_CUSSA RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21633449|gb|AAM52199.1| ATP synthase beta subunit [Cuscuta sandwichiana] gi|66876462|gb|AAY58014.1| AtpB [Cuscuta sandwichiana] Length = 494 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + LS I PP + F+TGI+V+D+ P G Sbjct: 104 LGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLKLDTRLSIFETGIKVVDLLAPYRRG 162 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGDNL 214 ++G+F G+G+GK+ L+ + + VGER RE E E + + Sbjct: 163 GKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGGVGERTREGNDLYMEMKESGVINQQ 222 Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 223 KLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFIDNIFRFVQAGSEV 282 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 340 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RSLA +G YP VDPL S S + ++ K + + R++E +D Sbjct: 341 AHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQIVGEQHYKTAQRVKQTLQRYKELQD 400 Query: 389 IRLIGG 394 I I G Sbjct: 401 IIAILG 406 >gi|139389425|ref|YP_001123122.1| ATP synthase CF1 beta subunit [Olimarabidopsis pumila] gi|190358694|sp|A4QJU0|ATPB_OLIPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134286319|dbj|BAF49946.1| ATPase beta subunit [Olimarabidopsis pumila] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|56808687|ref|ZP_00366409.1| COG1156: Archaeal/vacuolar-type H+-ATPase subunit B [Streptococcus pyogenes M49 591] gi|209558709|ref|YP_002285181.1| V-type ATP synthase subunit B [Streptococcus pyogenes NZ131] gi|238058280|sp|B5XJH4|VATB_STRPZ RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|209539910|gb|ACI60486.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes NZ131] Length = 471 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 167/334 (50%), Gaps = 13/334 (3%) Query: 41 QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98 Y L D +H G+ GQV+ + D +V + G ++ + F ++ S Sbjct: 27 HYNELVDITLHNGERRK--GQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHSLELAVS 84 Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ + +G+PIDG L + ++I + + R ++ +TGI ID L Sbjct: 85 EDMVGRIFDGMGQPIDGGPELIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212 GQ++ VF+GSG+ + L + AR SD V+ + +G E F+ D Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDDNFAVVFAAMGITFEEAEFFMNDLRET 203 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270 + +SV+ + +++ I R P A+T AEY + KG +VL+I+ +T + ++RE++ Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKGMHVLVIMTDMTNYCEALREVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P RGYP +++ L L ER G +KG++T + + + D+ PI D Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLIGKKGSVTQIPILTMPEDDITHPIPDLTGY 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L++ L + G PP++ L S+SRL DK Sbjct: 324 ITEGQIILSQELYKNGFRPPINVLPSLSRLKDKG 357 >gi|307343740|emb|CBJ19287.1| atpD synthase beta subunit [Micromonospora sp. SGA16] Length = 306 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 5 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 64 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 65 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 124 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 125 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 182 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E V++ + Sbjct: 183 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFAVATEVKR 242 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 243 ILQRYKDLQDIIAILG 258 >gi|297837941|ref|XP_002886852.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297332693|gb|EFH63111.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|139522589|gb|ABO77689.1| ATP synthase beta subunit [Siphocampylus affinis] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRXTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMEXINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|6687737|emb|CAB65057.1| ATP synthase beta subunit [Hydrolea ovata] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 115/371 (30%), Positives = 183/371 (49%), Gaps = 33/371 (8%) Query: 49 VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SA 99 +V QG+ D+LGQ I + ++ V + + ++ G V G P Sbjct: 47 LVVQGR--DSLGQPINVTCEVQQLLGNNRVRTVAMSATDGLTRGMEVIDTGAAISVPVGG 104 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D S I P + + F+TGI+V+D+ P Sbjct: 105 STLGRIFNVLGEPVD---DLGPVDASTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESK 220 Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + +N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYQTAQKVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|15422202|emb|CAC60316.1| ATP synthase beta subunit [Abrophyllum ornans] Length = 496 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 217 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 218 GVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE K + + R Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYKTAQRVKQTLQR 395 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 396 YKELQDIITILG 407 >gi|305671677|gb|ADM63148.1| ATP synthase beta subunit [Patrinia triloba] Length = 442 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 55 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 111 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 112 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 170 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 171 GVINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 230 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 231 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 288 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + D+ + + + R Sbjct: 289 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGDKHYETAQRVKQTLQR 348 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 349 YKELQDIIAILG 360 >gi|228016078|gb|ACP50916.1| ATP synthase CF1 beta subunit [Pinus rzedowskii] Length = 492 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRPAPTFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|148553547|ref|YP_001261129.1| F0F1 ATP synthase subunit beta [Sphingomonas wittichii RW1] gi|190358706|sp|A5V3X5|ATPB_SPHWW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|148498737|gb|ABQ66991.1| ATP synthase F1, beta subunit [Sphingomonas wittichii RW1] Length = 484 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 93/321 (28%), Positives = 158/321 (49%), Gaps = 21/321 (6%) Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 + R+ GR++N +G+PID + S I ++ P +++ TGI+V Sbjct: 81 QIRVPVGPQTLGRILNVIGEPIDERGPVNATQTS-PIHAEAPLFVDQSTDASILVTGIKV 139 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIED 208 ID+ P G +IG+F G+G+GK+ L+ + + + VGER RE + + Sbjct: 140 IDLLAPYAKGGKIGLFGGAGVGKTVLIQELINNIAKGHGGTSVFAGVGERTREGNDLYHE 199 Query: 209 YLGDNL-------------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLL 254 +L + K +V +E P R L+ +TIAEYF +G +VL Sbjct: 200 FLDAGVIAKDADGNPTPEGSKVALVFGQMNEPPGARARVALSGLTIAEYFRDVEGQDVLF 259 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ L ERI + KG+IT+V ++ Sbjct: 260 FVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTDMGALQERI--TSTNKGSITSVQAIY 317 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373 V D+ DP + + LD LNR+++E G YP VDPL S SR+ + E + Sbjct: 318 VPADDLTDPAPATSFAHLDATTNLNRAISELGIYPAVDPLDSTSRMLEPRIVGQEHYETA 377 Query: 374 SSLTHLIHRFEETRDIRLIGG 394 ++ + +++ +DI I G Sbjct: 378 RAVQETLQKYKSLQDIIAILG 398 >gi|56236586|gb|AAV84660.1| ATP synthase beta subunit [Torreya californica] Length = 423 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG G L+ + + PA + + F+TGI+V+D+ P Sbjct: 35 TTLGRIFNVLGEPVD---DLGPVGALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAP 91 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 92 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 150 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 151 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 210 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 268 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + +E + + + R+ Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|33327747|gb|AAQ09237.1| ATP synthase beta subunit [Euonymus alatus] Length = 490 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S ++ K PA + + F+TGI+V+D+ P Sbjct: 98 ATLGRIFNVLGEPVD---NLGPVDTSTTSLIHKSAPAFIQLETKLSIFETGIKVVDLLAP 154 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 214 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 215 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 274 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 332 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 392 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 393 ELQDIIAILG 402 >gi|319778925|ref|YP_004129838.1| ATP synthase beta chain [Taylorella equigenitalis MCE9] gi|317108949|gb|ADU91695.1| ATP synthase beta chain [Taylorella equigenitalis MCE9] Length = 467 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + + + I P + +TGI+VID+ P G Sbjct: 93 GRIMDVLGRPIDEAGPI-EHEEKRSIHQPAPKFDELSPSVELLETGIKVIDLVCPFAKGG 151 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ L++ A+ V VGER RE +F + N L K Sbjct: 152 KVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMEESNVLDKV 210 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G ++LL +D+I R+ + E++ G +P Sbjct: 211 AMVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDILLFIDNIYRYTLAGTEVSALLGRMP 270 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT++ +V V D+ DP + LD +V Sbjct: 271 SAVGYQPTLAEEMGVLQERI--TSTKTGSITSIQAVYVPADDLTDPSPATTFLHLDSTVV 328 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G YP VDPL S SR D +E V+ ++ + R+++ RDI I G Sbjct: 329 LSRDIASLGIYPAVDPLDSSSRQLDPHVVGEEHYSVARAVQQTLQRYKDLRDIIAILG 386 >gi|288922995|ref|ZP_06417152.1| ATP synthase F1, beta subunit [Frankia sp. EUN1f] gi|288345671|gb|EFC80043.1| ATP synthase F1, beta subunit [Frankia sp. EUN1f] Length = 479 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 14/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 G V N LG P+D D K D + I P + + F TGI+VID+ P Sbjct: 105 GHVFNVLGNPLDVD----KVDAATYWPIHRSAPTFDQLESKTEMFTTGIKVIDLLAPYVR 160 Query: 161 GQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKK 216 G +IG+F G+G+GK+ ++ R + F V + + VGER RE + F+E ++ Sbjct: 161 GGKIGLFGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVIED 220 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGE 275 + +V DE P R L A+T+AEYF + +VLL +D+I RF + E++T G Sbjct: 221 TALVFGQMDEPPGTRLRVALGALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGR 280 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD Sbjct: 281 MPSAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDAQ 338 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 VL+RS+++ G YP V PL S SR+ D + + ++ R+++ +DI I G Sbjct: 339 TVLDRSISDLGIYPAVSPLDSNSRILDPRYIGQTHYDTAREVQRILQRYKDLQDIIAILG 398 >gi|139522595|gb|ABO77693.1| ATP synthase beta subunit [Centropogon aequatorialis] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|6687280|emb|CAB64905.1| ATP synthase beta subunit [Codonopsis pilosula] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIITILG 409 >gi|224024062|ref|ZP_03642428.1| hypothetical protein BACCOPRO_00779 [Bacteroides coprophilus DSM 18228] gi|224017284|gb|EEF75296.1| hypothetical protein BACCOPRO_00779 [Bacteroides coprophilus DSM 18228] Length = 508 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 101/327 (30%), Positives = 163/327 (49%), Gaps = 45/327 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N +G+ IDG L + D I + P + ++ TGI+VID+ P G Sbjct: 95 GRVMNVVGETIDGMKELDRTD-GFPIHREPPKFEDLATTQEVLFTGIKVIDLLEPYLKGG 153 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 154 KIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 211 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSK- 248 GD KS+ +V +E P R+ L+ +T+AE F + Sbjct: 212 GDEFLKSMEEGNWDLSKVDYNEVEKSQVAMVFGQMNEPPGARQSVALSGLTLAESFRDRK 271 Query: 249 -GDN----VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 GDN +L +D+I RF + E++ G +P A GY ++ +E+ ++ ERI + + Sbjct: 272 TGDNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TSTK 329 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 330 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 389 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389 E + + ++ R +E +DI Sbjct: 390 LIVGKEHYETAQRVKQILQRNKELQDI 416 >gi|224179401|ref|YP_002600811.1| CF1 beta subunit of ATP synthase [Pycnococcus provasolii] gi|217314444|gb|ACK36786.1| CF1 beta subunit of ATP synthase [Pycnococcus provasolii] Length = 482 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 162/311 (52%), Gaps = 26/311 (8%) Query: 103 GRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D GD S D ++ I K P + F++GI+V+D+ P Sbjct: 98 GRIFNVLGEPVDSMGDVSTA-ADGTLPIHRKAPAFADLDTNLAIFESGIKVVDLLAPYRR 156 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 157 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESGVIN 215 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E+ L D+ K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 216 ENKLTDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 273 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 274 GAEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 331 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W + + ++ ++ R+ Sbjct: 332 ATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYDVAQNIKQILQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|5758881|gb|AAD50855.1| ATP synthase beta subunit [Globba curtisii] Length = 496 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G V G I GR Sbjct: 50 KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSIPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D S I PP + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTSTTSPIHRPAPPFIELDTKFSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + NVLL +D+I RF + E++ Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|139522631|gb|ABO77717.1| ATP synthase beta subunit [Burmeistera lutosa] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|19033051|gb|AAL83510.1|AF408782_1 ATP synthase beta subunit [Chara connivens] Length = 402 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S+ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|88807398|ref|ZP_01122910.1| ATP synthase subunit B [Synechococcus sp. WH 7805] gi|88788612|gb|EAR19767.1| ATP synthase subunit B [Synechococcus sp. WH 7805] Length = 487 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 156/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + I P + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPV-NASATAPIHRSAPKLTELETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKDSGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 ++L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 AEDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + A D K ++ + R++E Sbjct: 334 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGEDHYKTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|183206592|gb|ACC54494.1| ATP synthase beta subunit [Microcodon glomeratum] Length = 486 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 92 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 207 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 208 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 267 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 268 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 325 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + S + + S+ + R Sbjct: 326 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSHEHYETAQSVKQTLQR 385 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 386 YKELQDIITILG 397 >gi|139522541|gb|ABO77657.1| ATP synthase beta subunit [Lobelia polyphylla] gi|139522544|gb|ABO77659.1| ATP synthase beta subunit [Lobelia excelsa] gi|139522547|gb|ABO77661.1| ATP synthase beta subunit [Lobelia tupa] gi|139522550|gb|ABO77663.1| ATP synthase beta subunit [Lobelia bridgesii] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|113910804|gb|ABI48134.1| ATPase beta subunit [Nowellia curvifolia] Length = 454 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 69 LGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 125 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 185 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 186 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 245 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 246 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 303 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 304 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 362 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 363 LQDIIAILG 371 >gi|7708288|emb|CAB90068.1| ATP synthase beta subunit [Euonymus alatus] Length = 484 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S ++ K PA + + F+TGI+V+D+ P Sbjct: 98 ATLGRIFNVLGEPVD---NLGPVDTSTTSLIHKSAPAFIQLETKLSIFETGIKVVDLLAP 154 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 214 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 215 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 274 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 332 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 392 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 393 ELQDIIAILG 402 >gi|294678490|ref|YP_003579105.1| ATP synthase F1 subunit beta [Rhodobacter capsulatus SB 1003] gi|2493025|sp|P72247|ATPB_RHOCA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|1524324|emb|CAA67910.1| FoF1 ATP synthase [Rhodobacter capsulatus] gi|294477310|gb|ADE86698.1| ATP synthase F1, beta subunit [Rhodobacter capsulatus SB 1003] Length = 472 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 94/310 (30%), Positives = 159/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+P+D + K + + I P + + TGI+VID+ P Sbjct: 83 ATLGRILNVIGEPVDERGDVSKAE-ARAIHQPAPDFAAQSTESQILVTGIKVIDLLAPYS 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLGD-- 212 G +IG+F G+G+GK+ L+ + KV + + VGER RE + + + Sbjct: 142 KGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGFSVFAGVGERTREGNDLYHEMIESGV 199 Query: 213 -NLKK-----SVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 NL+K +V +E P R LT +T+AE F + G +VL +D+I RF + Sbjct: 200 INLEKLEESKVALVYGQMNEPPGARARVALTGLTLAEQFRDQSGTDVLFFVDNIFRFTQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP Sbjct: 260 GSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGSITSVQAIYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R+++E G YP VDPL S SR+ D +E ++ + ++ R++ Sbjct: 318 ATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPQVVGEEHYQVARDVQGMLQRYK 377 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 378 SLQDIIAILG 387 >gi|307343708|emb|CBJ19271.1| atpD synthase beta subunit [Micromonospora sp. GUI61] Length = 298 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K V L +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVSLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYSPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|156530129|gb|ABU75161.1| AtpB [Eurycoma longifolia] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTSSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ + + L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTXMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|14717935|gb|AAK72710.1| ATP synthase beta subunit [Androstachys johnsonii] Length = 485 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + K F+TGI+V+D+ Sbjct: 97 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIELDTKLKIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211 P G +IG+F G+G+GK+ L+ + + + VGER RE + ++ Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGVSVFGGVGERTREGNDLYKEMKESG 213 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 273 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 331 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + D+ ++ + + R+ Sbjct: 332 PATTFAHLDATTVLSRKLAAKGIYPAVDPLDSTSTMLQPNIVGDDHYEIAQKVKQTLQRY 391 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 392 KELQDIIAILG 402 >gi|307343738|emb|CBJ19286.1| atpD synthase beta subunit [Micromonospora sp. SGA9] Length = 307 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+ + +DI I G Sbjct: 239 ILQRYRDLQDIIAILG 254 >gi|71277378|gb|AAZ29869.1| ATP synthase beta subunit [Chara zeylanica] Length = 349 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S+ + + PA + + F+TGI+V+D+ P Sbjct: 28 LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 84 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 85 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 145 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 322 LQDIIAILG 330 >gi|139522565|gb|ABO77673.1| ATP synthase beta subunit [Centropogon baezanus] Length = 498 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|158312878|ref|YP_001505386.1| F0F1 ATP synthase subunit beta [Frankia sp. EAN1pec] gi|226740202|sp|A8L3W5|ATPB_FRASN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|158108283|gb|ABW10480.1| ATP synthase F1, beta subunit [Frankia sp. EAN1pec] Length = 479 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 153/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V N LG P+D D + I P + + F TGI+VID+ P G Sbjct: 105 GHVFNVLGNPLDVDKV--DAETYWPIHRSAPAFDQLESKTEMFTTGIKVIDLLAPYVRGG 162 Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+ G+G+GK+ ++ R + F V + + VGER RE + F+E ++ + Sbjct: 163 KIGLMGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVIEDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRLRVALGALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD + V Sbjct: 283 SAVGYQPTLADEMGALQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDANTV 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++++ G YP V PL S SR+ D + E + ++ R+++ +DI I G Sbjct: 341 LDRAISDLGIYPAVSPLDSNSRILDARYIGQEHYDTAREVQRILQRYKDLQDIIAILG 398 >gi|72382808|ref|YP_292163.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. NATL2A] gi|118573720|sp|Q46J68|ATPB_PROMT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|72002658|gb|AAZ58460.1| ATP synthase F1 subcomplex beta subunit [Prochlorococcus marinus str. NATL2A] Length = 488 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D L K + I P + + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGDL-KNVTTSPIHRSAPSLTDLETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 ++L KS + + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 SEDLTKSKLALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGELQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + + DE + ++ + R++E Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|29346121|ref|NP_809624.1| F0F1 ATP synthase subunit beta [Bacteroides thetaiotaomicron VPI-5482] gi|253568455|ref|ZP_04845866.1| ATP synthase subunit beta [Bacteroides sp. 1_1_6] gi|298385487|ref|ZP_06995045.1| ATP synthase F1, beta subunit [Bacteroides sp. 1_1_14] gi|81842285|sp|Q8A9V4|ATPB_BACTN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|29338015|gb|AAO75818.1| ATP synthase beta chain [Bacteroides thetaiotaomicron VPI-5482] gi|251842528|gb|EES70608.1| ATP synthase subunit beta [Bacteroides sp. 1_1_6] gi|298261628|gb|EFI04494.1| ATP synthase F1, beta subunit [Bacteroides sp. 1_1_14] Length = 505 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 104/328 (31%), Positives = 162/328 (49%), Gaps = 48/328 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG SL + + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKSLDRTG-AYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYAKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE------ 207 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 208 ------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS 247 DY + L+KS V + +E P R L+ +T+AE F Sbjct: 210 GEAFKESMEKGDWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESFRD 267 Query: 248 KGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 268 AGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TST 325 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 KG+IT+V +V V D+ DP + S LD VL+R + E G YP VDPLAS SR+ D Sbjct: 326 RKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILD 385 Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDI 389 E V+ + ++ R +E +DI Sbjct: 386 PHIVGQEHYDVAQRVKQILQRNKELQDI 413 >gi|317502818|ref|ZP_07960921.1| ATP synthase F1 sector beta subunit [Prevotella salivae DSM 15606] gi|315666058|gb|EFV05622.1| ATP synthase F1 sector beta subunit [Prevotella salivae DSM 15606] Length = 508 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 101/334 (30%), Positives = 158/334 (47%), Gaps = 49/334 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR++N +GKPIDG +L+ME + + P ++ K TGI+VID+ P Sbjct: 95 GRMMNVIGKPIDG-----MAELNMEGAYPIHRPAPTFDQLSTHKEMLATGIKVIDLLEPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ L+ + + + VGER RE + + D L Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLLRDMLDSGVI 209 Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247 G+ KK++ +V +E P R L+ +T+AE F Sbjct: 210 KYGEAFKKAMEEGRWDLSLVDKKELSESQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269 Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 G +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + Sbjct: 270 HGGKDGESADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TS 327 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G+IT+V +V V D+ DP + S LD L+R +AE G YP VDPL S SR+ Sbjct: 328 TKNGSITSVQAVYVPADDLTDPAPATTFSHLDATTELSRKIAELGIYPAVDPLGSTSRIL 387 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D E + L+ R+ E +DI I G Sbjct: 388 DPLIVGKEHYNCAQRVKQLLQRYNELQDIIAILG 421 >gi|228016707|gb|ACP51535.1| ATP synthase CF1 beta subunit [Pinus aristata] Length = 492 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRPAPTFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|15425570|emb|CAC60321.1| ATP synthase beta subunit [Dampiera spicigera] Length = 489 Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + + ++ G D++ + GR Sbjct: 41 KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVGGATLGR 100 Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D LG D S I P + F+TGI+V+D+ P G Sbjct: 101 IFNVLGEPVD---DLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 157 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 158 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQN 217 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF G +VLL +D+I RF + E++ Sbjct: 218 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQAGSEVS 277 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 278 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 335 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 336 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 395 Query: 390 RLIGG 394 I G Sbjct: 396 IAILG 400 >gi|119350483|gb|ABL63192.1| AtpB [Draparnaldia plumosa] Length = 388 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 155/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + + I P + F+TGI+V+D+ P Sbjct: 34 LGRIFNVLGEPVD---NLGPVEAEQKLPIHRSAPAFTDLDTRLAIFETGIKVVDLLAPYR 90 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD---- 212 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 91 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVIN 150 Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 151 ESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 210 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 211 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 268 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + DE + + R++E Sbjct: 269 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYGCAQQVKQTLQRYKEL 328 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 329 QDIIAILG 336 >gi|71370908|gb|AAZ30683.1| ATP synthase beta subunit [Crepidula fornicata] Length = 350 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 88/279 (31%), Positives = 145/279 (51%), Gaps = 14/279 (5%) Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I + P ++ ++ +TGI+V+D+ P G +IG+F G+G+GK+ L+ + Sbjct: 12 IHQEAPDYVDMSVEQEILETGIKVVDMLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAK 71 Query: 188 DK---VIISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPLT 237 + + VGER RE + + L D+ K +V +E P R LT Sbjct: 72 AHRGYSVFAGVGERTREGNDLYHEMITSRVISLDDDTSKVSLVYGQMNEPPGARARVALT 131 Query: 238 AVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 +T+AEYF +G +VLL +D+I RF + E++ G +P A GY ++ +++ + ER Sbjct: 132 GLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQER 191 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 I + KG+IT+V ++ V D+ DP + + LD VL+R +AE G YP VDPL S Sbjct: 192 I--TTTNKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRGIAELGIYPAVDPLDS 249 Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 SR+ D +E K ++ ++ F+ +DI I G Sbjct: 250 TSRILDPNIVGEEHYKTARAVQKILQDFKSLQDIIAILG 288 >gi|139522559|gb|ABO77669.1| ATP synthase beta subunit [Centropogon granulosus subsp. nutans] gi|139522562|gb|ABO77671.1| ATP synthase beta subunit [Centropogon granulosus subsp. granulosus] gi|139522568|gb|ABO77675.1| ATP synthase beta subunit [Centropogon solanifolius] gi|139522571|gb|ABO77677.1| ATP synthase beta subunit [Centropogon solanifolius] gi|139522574|gb|ABO77679.1| ATP synthase beta subunit [Siphocampylus tupaeformis] gi|139522577|gb|ABO77681.1| ATP synthase beta subunit [Siphocampylus ecuadorensis] gi|139522580|gb|ABO77683.1| ATP synthase beta subunit [Siphocampylus ecuadorensis] gi|139522583|gb|ABO77685.1| ATP synthase beta subunit [Centropogon sp. UCBG 902279] gi|139522586|gb|ABO77687.1| ATP synthase beta subunit [Centropogon tessmannii] gi|139522592|gb|ABO77691.1| ATP synthase beta subunit [Siphocampylus giganteus] gi|139522598|gb|ABO77695.1| ATP synthase beta subunit [Centropogon sodiroanus] gi|139522601|gb|ABO77697.1| ATP synthase beta subunit [Centropogon sodiroanus] gi|139522604|gb|ABO77699.1| ATP synthase beta subunit [Centropogon grandidentatus] gi|139522607|gb|ABO77701.1| ATP synthase beta subunit [Centropogon llanganatensis] gi|139522610|gb|ABO77703.1| ATP synthase beta subunit [Centropogon glabrifilis] gi|139522613|gb|ABO77705.1| ATP synthase beta subunit [Centropogon medusa] gi|139522616|gb|ABO77707.1| ATP synthase beta subunit [Centropogon salviiformis] gi|139522619|gb|ABO77709.1| ATP synthase beta subunit [Centropogon comosus] gi|139522622|gb|ABO77711.1| ATP synthase beta subunit [Centropogon nigricans] gi|139522634|gb|ABO77719.1| ATP synthase beta subunit [Burmeistera ceratocarpa] Length = 498 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|139389649|ref|YP_001123206.1| ATPase beta subunit [Arabis hirsuta] gi|190358254|sp|A4QK25|ATPB_ARAHI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134286404|dbj|BAF50030.1| ATPase beta subunit [Arabis hirsuta] Length = 498 Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|183206504|gb|ACC54450.1| ATP synthase beta subunit [Codonopsis lanceolata] Length = 482 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 88 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 205 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 264 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 322 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R+ Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRY 382 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 383 KELQDIITILG 393 >gi|139522553|gb|ABO77665.1| ATP synthase beta subunit [Lysipomia pumila] Length = 498 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|20384955|gb|AAM19144.1| ATP synthase beta subunit [Chara rusbyana] Length = 402 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S+ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQRTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|57641538|ref|YP_184016.1| V-type ATP synthase subunit B [Thermococcus kodakarensis KOD1] gi|73920417|sp|Q5JIR2|VATB_PYRKO RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|57159862|dbj|BAD85792.1| archaeal/vacuolar-type H+-ATPase, subunit B [Thermococcus kodakarensis KOD1] Length = 465 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 103/359 (28%), Positives = 180/359 (50%), Gaps = 22/359 (6%) Query: 19 LVVQGGYISSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYIC 73 +++ G S+++ +Y + + + V G+ V + GQV+ R ++ IV + Sbjct: 1 MIMPGMEYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEAREDMAIVQVF 60 Query: 74 PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMS 130 +I + F ++ S GR+ N +GKPIDG + + D+ ++ Sbjct: 61 EGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------ 184 V A R ++ TGI ID L GQ++ +F+GSG+ + L + AR Sbjct: 121 PVARAYPRDFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGE 176 Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242 + F V+ + +G E F + + ++++V+ + +D+ I R + P A+T+A Sbjct: 177 EEQF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235 Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 EY + D VL+IL +T +A ++REI+ E+P RGYP ++++L + ER G Sbjct: 236 EYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVR 295 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 +KG+IT + + + D+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354 >gi|282859105|ref|ZP_06268236.1| ATP synthase F1, beta subunit [Prevotella bivia JCVIHMP010] gi|282588135|gb|EFB93309.1| ATP synthase F1, beta subunit [Prevotella bivia JCVIHMP010] Length = 508 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/330 (30%), Positives = 156/330 (47%), Gaps = 41/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PIDG +SL + + I + P ++ TGI+VID+ P G Sbjct: 95 GRMLNVIGQPIDGMESLNM-EGAYPIHREAPKFEELSTRKEILSTGIKVIDLLEPYMKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL--------- 210 +IG+F G+G+GK+ L+ + + + VGER RE + I D L Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIKYGE 213 Query: 211 -----------------GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250 + LKKS +V +E P R L+ +T+AE F G Sbjct: 214 KFREAMDQGKWDLSLIDKEELKKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273 Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + + G Sbjct: 274 DGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKNG 331 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + S LD VL+R + E G YP VDPLAS SR+ D Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILDPLI 391 Query: 366 -SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 D + + + + E +DI I G Sbjct: 392 VGKDHYECAQRVKETLQHYNELQDIIAILG 421 >gi|139522628|gb|ABO77715.1| ATP synthase beta subunit [Burmeistera domingensis] Length = 498 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|139522676|gb|ABO77747.1| ATP synthase beta subunit [Burmeistera truncata] gi|139522679|gb|ABO77749.1| ATP synthase beta subunit [Burmeistera auriculata] Length = 498 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLAIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|157804173|ref|YP_001492722.1| F0F1 ATP synthase subunit beta [Rickettsia canadensis str. McKiel] gi|166222408|sp|A8F004|ATPB_RICCK RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157785436|gb|ABV73937.1| F0F1 ATP synthase subunit beta [Rickettsia canadensis str. McKiel] Length = 473 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 19/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR++N +G+ IDG + ++S + K P+ Q E+ TGI+V+D+ P Sbjct: 86 ATLGRIMNVVGESIDGKGEIKSSNVSS--IYKPAPSFTNQSSERTILVTGIKVVDLLAPY 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGD--- 212 G +IG+F G+G+GK+ L+ + + + VGER RE + + + Sbjct: 144 TKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVI 203 Query: 213 NLK-----KSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHS 265 NL+ K +V DE P R L+ +TIAE F ++G +VL +D+I RF + Sbjct: 204 NLEEPEKSKVALVYGQMDEPPGARARVALSGLTIAESFRDMNEGQDVLFFVDNIFRFTQA 263 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP Sbjct: 264 GSEVSALLGRVPSAVGYQPTLATDMGALQERI--TSTKHGSITSVQAIYVPADDLTDPAP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFE 384 + + LD VL+R +AE G YP VDPL S S++ D +E V+ + ++ ++ Sbjct: 322 ATSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQVLQTYK 381 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 382 SLQDIIAILG 391 >gi|307343642|emb|CBJ19238.1| atpD synthase beta subunit [Micromonospora matsumotoense] Length = 310 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVFGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E V++ Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFTVATEAKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|324986447|ref|YP_004276318.1| ATP synthase CF1 beta subunit [Pinus monophylla] gi|323522542|gb|ADX94884.1| ATP synthase CF1 beta subunit [Pinus monophylla] Length = 492 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRPAPTFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|261879468|ref|ZP_06005895.1| ATP synthase F1 [Prevotella bergensis DSM 17361] gi|270333893|gb|EFA44679.1| ATP synthase F1 [Prevotella bergensis DSM 17361] Length = 508 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 98/330 (29%), Positives = 159/330 (48%), Gaps = 41/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PIDG ++L + S I + P + ++ TGI+VID+ P G Sbjct: 95 GRMMNVIGQPIDGMEALSM-EGSYPIHREAPKFDDLSTNKEILTTGIKVIDLLEPYMKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212 +IG+F G+G+GK+ L+ + + + VGER RE + + D L G+ Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHEGYSVFAGVGERTREGNDLLRDMLESGVIRYGE 213 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG-- 249 K++ +V +E P R L+ +T+AE F G Sbjct: 214 KFNKAMEEGKWDLSLVDREELSKSQATLVYGQMNEPPGARASVALSGLTVAEQFRDHGGK 273 Query: 250 ----DNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +++ +D+I RF + E++ G +P A GY ++ SE+ L ERI + ++G Sbjct: 274 GGSASDIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGALQERI--TSTKRG 331 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + S LD VL+R + E G YP VDPLAS SR+ D Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRILDPLI 391 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + + + ++E +DI I G Sbjct: 392 VGKEHYECAQRVKETLQHYKELQDIIAILG 421 >gi|183206526|gb|ACC54461.1| ATP synthase beta subunit [Campanula reverchonii] Length = 480 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 201 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 202 GVINEQKFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 261 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 262 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 319 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K ++ + R Sbjct: 320 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYKTAQNVKQTLQR 379 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 380 YKELQDIITILG 391 >gi|139389808|ref|YP_001123469.1| ATP synthase CF1 beta subunit [Crucihimalaya wallichii] gi|190358662|sp|A4QKT8|ATPB_CRUWA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134286670|dbj|BAF50293.1| ATPase beta subunit [Crucihimalaya wallichii] Length = 498 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|139522670|gb|ABO77743.1| ATP synthase beta subunit [Burmeistera holm-nielsenii] Length = 498 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|19033053|gb|AAL83511.1|AF408783_1 ATP synthase beta subunit [Lamprothamnium macropogon] Length = 402 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTTITFPIHRAAPAFTQLDTQLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|332158478|ref|YP_004423757.1| V-type ATP synthase subunit B [Pyrococcus sp. NA2] gi|331033941|gb|AEC51753.1| V-type ATP synthase subunit B [Pyrococcus sp. NA2] Length = 462 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 104/351 (29%), Positives = 176/351 (50%), Gaps = 22/351 (6%) Query: 27 SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81 S+I+ +Y + + + V G+ V + GQV+ R NL IV + +I Sbjct: 6 STISKIYGPLMIVEGVKGVAYGEVVEIETETGEKRKGQVLDARENLAIVQVFEGTRDLDI 65 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138 + F ++ S GR+ N +GKPIDG + + D+ ++ V A R Sbjct: 66 RTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPINPVARAYPR 125 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191 ++ TGI ID L GQ++ +F+GSG+ + L + AR + F V+ Sbjct: 126 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF-AVV 180 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 + +G E F + + ++++V+ + +D+ I R + P A+T+AEY + + D Sbjct: 181 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFEYD 240 Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VL+IL +T + ++REI+ E+P RGYP ++++L + ER G KG+IT Sbjct: 241 MHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGSITQ 300 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + + D+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 301 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 351 >gi|139522637|gb|ABO77721.1| ATP synthase beta subunit [Burmeistera multiflora] gi|139522640|gb|ABO77723.1| ATP synthase beta subunit [Burmeistera multiflora] gi|139522646|gb|ABO77727.1| ATP synthase beta subunit [Burmeistera crispiloba] gi|139522649|gb|ABO77729.1| ATP synthase beta subunit [Burmeistera crispiloba] gi|139522652|gb|ABO77731.1| ATP synthase beta subunit [Burmeistera crispiloba] gi|139522655|gb|ABO77733.1| ATP synthase beta subunit [Burmeistera sodiroana] gi|139522658|gb|ABO77735.1| ATP synthase beta subunit [Burmeistera sodiroana] gi|139522661|gb|ABO77737.1| ATP synthase beta subunit [Burmeistera sodiroana] gi|139522664|gb|ABO77739.1| ATP synthase beta subunit [Burmeistera sodiroana] gi|139522667|gb|ABO77741.1| ATP synthase beta subunit [Burmeistera sodiroana] gi|139522673|gb|ABO77745.1| ATP synthase beta subunit [Burmeistera rubrosepala] gi|139522682|gb|ABO77751.1| ATP synthase beta subunit [Burmeistera oyacachensis] gi|139522685|gb|ABO77753.1| ATP synthase beta subunit [Burmeistera borjensis] gi|139522688|gb|ABO77755.1| ATP synthase beta subunit [Burmeistera refracta] gi|139522691|gb|ABO77757.1| ATP synthase beta subunit [Burmeistera refracta] gi|139522694|gb|ABO77759.1| ATP synthase beta subunit [Burmeistera refracta] gi|139522697|gb|ABO77761.1| ATP synthase beta subunit [Burmeistera glabrata] gi|139522700|gb|ABO77763.1| ATP synthase beta subunit [Burmeistera cylindrocarpa] gi|139522703|gb|ABO77765.1| ATP synthase beta subunit [Burmeistera cylindrocarpa] gi|139522709|gb|ABO77769.1| ATP synthase beta subunit [Burmeistera resupinata subsp. resupinata] gi|139522718|gb|ABO77775.1| ATP synthase beta subunit [Burmeistera succulenta] gi|139522721|gb|ABO77777.1| ATP synthase beta subunit [Burmeistera succulenta] Length = 498 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|139388917|ref|YP_001123644.1| ATP synthase CF1 beta subunit [Lepidium virginicum] gi|190358676|sp|A4QLB3|ATPB_LEPVR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134286847|dbj|BAF50468.1| ATPase beta subunit [Lepidium virginicum] Length = 502 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 173/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 54 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 113 Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D I P + F+TGI+V+D+ P G Sbjct: 114 IFNVLGEPVD---NLGPVDNRTKAPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 170 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 171 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 230 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 231 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 290 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 291 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 348 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 349 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 408 Query: 390 RLIGG 394 I G Sbjct: 409 IAILG 413 >gi|170293985|gb|ACB13086.1| ATP synthase beta subunit [Pseudochlorella sp. CCAP 211/1A] Length = 367 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 106/309 (34%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG P+D ++ D + I P ++ F+TGI+V+D+ P G Sbjct: 21 LGRIFNVLGDPVDNLGNVETKD-GLPIHRAAPAFVDLDTKLSIFETGIKVVDLLAPYRRG 79 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD- 212 +IG+F G+G+GK+ L+ + A++ V + ER RE E E + D Sbjct: 80 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESGVIDE 138 Query: 213 -NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF SK D VLL +D+I RF + Sbjct: 139 SNLSQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDISKRD-VLLFIDNIFRFVQAGS 197 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 198 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 255 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 S LD VL+R+LA +G YP VDPL S S + + W EK + ++ + R++E Sbjct: 256 TFSHLDATTVLSRALASKGIYPAVDPLDSTSTML-QPWIVSEKHYECAQNVKQTLQRYKE 314 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 315 LQDIIAILG 323 >gi|139522712|gb|ABO77771.1| ATP synthase beta subunit [Burmeistera smaragdi] gi|139522715|gb|ABO77773.1| ATP synthase beta subunit [Burmeistera succulenta] Length = 498 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|61196976|gb|AAX39473.1| ATP synthase beta subunit [Chlorokybus atmophyticus] Length = 402 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 163/312 (52%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG + S + + PPA + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---NLGPVANKSTLPIHRDPPAFTELDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKESK 153 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 154 VINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQ 213 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 214 AGSEVSALLGRMPSAVGYQPTLSREMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 271 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R Sbjct: 272 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQRVKQTLQR 330 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 331 YKELQDIIAILG 342 >gi|159106801|ref|YP_001531221.1| ATP synthase CF1 beta subunit [Cuscuta obtusiflora] gi|190358664|sp|A8W3J1|ATPB_CUSOB RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|158142525|gb|ABW20566.1| ATP synthase CF1 beta subunit [Cuscuta obtusiflora] Length = 494 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + LS I PP + F+TGI+V+D+ P G Sbjct: 104 LGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLKLDTRLSIFETGIKVVDLLAPYRRG 162 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGDNL 214 ++G+F G+G+GK+ L+ + + VGER RE E E + + Sbjct: 163 GKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGGVGERTREGNDLYMEMKESGVINQQ 222 Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 223 KLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFIDNIFRFVQAGSEV 282 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 340 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RSLA +G YP VDPL S S + ++ K + + R++E +D Sbjct: 341 AHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQIVGEQHYKTAQRVKQTLQRYKELQD 400 Query: 389 IRLIGG 394 I I G Sbjct: 401 IIAILG 406 >gi|113910866|gb|ABI48165.1| ATPase beta subunit [Grimmia sp. Qiu 01090] Length = 472 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 101/320 (31%), Positives = 163/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D +LG D S + + PA + + F+TG Sbjct: 74 GPLSVPVGEATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETG 130 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208 I+V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + Sbjct: 131 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 190 Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256 Y+ +N+ +S V V +E P R LTA+T+AEYF +VLL + Sbjct: 191 YMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFI 250 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 251 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVP 308 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + W E+ + Sbjct: 309 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQ 367 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 368 GVKQTLQRYKELQDIIAILG 387 >gi|113910798|gb|ABI48131.1| ATPase beta subunit [Lophocolea heterophylla] Length = 472 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 163/312 (52%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 198 Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + D N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 VIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 258 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 376 YKELQDIIAILG 387 >gi|7708302|emb|CAB90078.1| ATP synthase beta subunit [Eucommia ulmoides] Length = 489 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 217 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 218 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + A + + + R Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGAGHYNIAQQVKQTLQR 395 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 396 YKELQDIIAILG 407 >gi|291547292|emb|CBL20400.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus sp. SR1/5] Length = 457 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 16/311 (5%) Query: 98 SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + LG+PID G + L + + + P A R E+ +TG+ ID Sbjct: 82 SGDMLGRVFDGLGRPIDDGPEILPEERRDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ +F+ SG+ + L + AR D V+ + +G E F+E + Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVRGKDEQFAVVFAAMGITFEESNFFVESFK 199 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268 + ++V+ V +++ + R P A+T AEY + + D +VL+IL IT +A ++RE Sbjct: 200 ETGAIDRTVLFVNLANDPAVERIATPRMALTAAEYLAFEKDMHVLVILTDITNYADALRE 259 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ E+P RGYP ++++L L ER G + + G+IT V + + D+ PI D Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKSGSITMVPILTMPEDDKTHPIPDLT 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383 I +G I+L+R L +G PP+D L S+SRL DK AD ++ L R Sbjct: 320 GYITEGQIILSRELYRKGITPPIDVLPSLSRLKDKGIGEGKTRADHANTMNQLFAAYARG 379 Query: 384 EETRDIRLIGG 394 +E +++ I G Sbjct: 380 KEAKELMTILG 390 >gi|255037511|ref|YP_003088132.1| F0F1 ATP synthase subunit beta [Dyadobacter fermentans DSM 18053] gi|254950267|gb|ACT94967.1| ATP synthase F1, beta subunit [Dyadobacter fermentans DSM 18053] Length = 504 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 99/333 (29%), Positives = 164/333 (49%), Gaps = 48/333 (14%) Query: 103 GRVINALGKPIDG----DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N +G+ IDG D S G + I P + TGI+VID+ P Sbjct: 92 GRLFNVIGEAIDGLTPLDSSTG-----ISIHRAAPKFEELATATEVLFTGIKVIDLLAPY 146 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L+ + + + + + VGER RE +RE IE + Sbjct: 147 VKGGKIGLFGGAGVGKTVLIQELINNIAKAYSGLSVFAGVGERTREGNDLMREMIEAGII 206 Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-- 245 G++ K S+ V +E P R L+ +T+AEYF Sbjct: 207 KYGEDFKHSMEEGGWDISKVDYNTLKDSQATFVFGQMNEPPGARARVALSGLTMAEYFRD 266 Query: 246 ---SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 +G ++L +D+I RF + E++ G +P A GY ++ +E+ ++ ERI + Sbjct: 267 GDGEGQGRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TST 324 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 ++G+IT+V +V V D+ DP + + LD VL+R ++E+G YP VDPL S SR+ + Sbjct: 325 KRGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKVSEKGIYPAVDPLDSASRILN 384 Query: 363 -KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + A + +++ R++E +DI I G Sbjct: 385 AETLGAAHYDCAQRVKNILQRYKELQDIIAILG 417 >gi|139389957|ref|YP_001123557.1| ATPase beta subunit [Draba nemorosa] gi|190358668|sp|A4QL26|ATPB_DRANE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134286759|dbj|BAF50381.1| ATPase beta subunit [Draba nemorosa] Length = 498 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGSPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|21684885|emb|CAD11569.1| ATP synthase beta subunit [Lachnocaulon anceps] Length = 491 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG PID +LG D S I P + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGXPID---NLGPVDTSATSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 215 VINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE ++ + + R+ Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKETLQRY 392 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 393 KELQDIIAILG 403 >gi|62958733|gb|AAY23677.1| ATP synthase beta subunit [Neohodgsonia mirabilis] Length = 382 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 22/310 (7%) Query: 101 WCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 + GR+ N LG+P+D +LG D++ + + PA + + F+TGI+V+D+ P Sbjct: 1 YSGRIFNVLGEPVD---NLGPVDVTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPY 57 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ L+ + + VGER RE E E + Sbjct: 58 RRGGKIGLFGGAGVGKTVLIMELINNIANAHGGVSVFGGVGERTREGNDLYMEMKESKVI 117 Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 + K K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 118 NEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 177 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 178 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 235 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 236 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 294 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 295 ELQDIIAILG 304 >gi|302418868|ref|XP_003007265.1| ATP synthase subunit beta [Verticillium albo-atrum VaMs.102] gi|261354867|gb|EEY17295.1| ATP synthase subunit beta [Verticillium albo-atrum VaMs.102] Length = 517 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 152/298 (51%), Gaps = 27/298 (9%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PID + K ++ I ++ P ++ + TGI+V+D+ P G Sbjct: 130 GRIMNVTGDPIDERGPI-KTKKTLPIHAEPPAFTDQSTTAEILVTGIKVVDLLAPYARGG 188 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV 218 +IG+F G+G+GK+ L++ A++ V VGER R R Sbjct: 189 KIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTRRPR--------------- 232 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 + + DE P R LT +TIAEYF +G +VLL +D+I RF + E++ G +P Sbjct: 233 --LRSDDEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIP 290 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ ++ + ERI + +KG+IT+V +V V D+ DP + + LD V Sbjct: 291 SAVGYQPTLAIDMGGMQERI--TTTQKGSITSVQAVYVPADDLTDPAPATTFAHLDATTV 348 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R ++E G YP VDPL S SR+ D E S++ ++ ++ +DI I G Sbjct: 349 LSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYDTASAVQQILQEYKSLQDIIAILG 406 >gi|139387259|ref|YP_001123380.1| ATP synthase CF1 beta subunit [Capsella bursa-pastoris] gi|190358274|sp|A4QKJ9|ATPB_CAPBU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134286580|dbj|BAF50204.1| ATPase beta subunit [Capsella bursa-pastoris] Length = 498 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 176/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + E + G V G+ + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGKPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDTAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|113910792|gb|ABI48128.1| ATPase beta subunit [Marsupella emarginata] Length = 472 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 160/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 86 GRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 142 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 202 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 203 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 262 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 263 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 320 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 321 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 379 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 380 QDIIAISG 387 >gi|15425584|emb|CAC60329.1| ATP synthase beta subunit [Levenhookia pauciflora] Length = 496 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E K S+ + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKTAQSVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|170293995|gb|ACB13091.1| ATP synthase beta subunit [Chaetopeltis orbicularis] Length = 366 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + I P ++ F+TGI+V+D+ P Sbjct: 21 LGRIFNVLGEPVD---NLGPVNAEEKLPIHRPAPAFVDLDTRLSIFETGIKVVDLLAPYR 77 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 78 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESKVIV 137 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DNL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 138 EDNLSESKVSLVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFVDNIFRFVQAGS 197 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 198 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPSSVA 255 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI-HRFEET 386 + LD VL+R+LA +G YP VDPL S S + DE + + R++E Sbjct: 256 TFAHLDATTVLSRNLAAKGIYPAVDPLDSASIMLQPYIVGDEHYGTAQRVKITPQRYKEL 315 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 316 QDIIAILG 323 >gi|218264981|ref|ZP_03478605.1| hypothetical protein PRABACTJOHN_04315 [Parabacteroides johnsonii DSM 18315] gi|218221649|gb|EEC94299.1| hypothetical protein PRABACTJOHN_04315 [Parabacteroides johnsonii DSM 18315] Length = 506 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PIDG L K S+ I + P + + TGI+VID+ P G Sbjct: 94 GRLMNVTGNPIDGMTELDKKG-SLPIHREPPKFEDLTTSREVLYTGIKVIDLLEPYSKGG 152 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ +++ F + + VGER RE +RE I+ + Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF---S 246 G+ KKS+ +V +E P R L+ +TIAE F + Sbjct: 211 GEEFKKSMEAGHWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDLA 270 Query: 247 SKGD--NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 ++G+ ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + +K Sbjct: 271 AEGETKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388 Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389 E + + ++ R +E +DI Sbjct: 389 IVGKEHYETAQRVKQILQRNKELQDI 414 >gi|139522625|gb|ABO77713.1| ATP synthase beta subunit [Burmeistera sp. Muchhala 142] Length = 498 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|139390355|ref|YP_001122953.1| ATPase beta subunit [Aethionema cordifolium] gi|190358249|sp|A4QJC2|ATPB_AETCO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134286148|dbj|BAF49777.1| ATPase beta subunit [Aethionema cordifolium] Length = 490 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|89574005|gb|ABD77228.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Didelphis virginiana] Length = 321 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 4 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 62 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 63 NDLYHEMIESGVINLKDTTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 122 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 123 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 180 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D +E V+ Sbjct: 181 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVA 240 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 241 RGVQKILQDYKSLQDIIAILG 261 >gi|90023606|ref|YP_529433.1| F0F1 ATP synthase subunit beta [Saccharophagus degradans 2-40] gi|118573741|sp|Q21DK8|ATPB_SACD2 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|89953206|gb|ABD83221.1| ATP synthase F1, beta subunit [Saccharophagus degradans 2-40] Length = 470 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 100/339 (29%), Positives = 165/339 (48%), Gaps = 16/339 (4%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V +G E +S G V + G + GR+++ LG PID + + + + Sbjct: 49 VVRAIAMGGSEGVSRGLAVENTGAPINVPVGTATLGRIMDVLGNPIDEKGPINETERA-S 107 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF 187 I K P E+ TGI+VID+ P G ++G+F G+G+GK+ + + Sbjct: 108 IHRKAPKYDELAASEELLATGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELINNIAT 167 Query: 188 DKVIISL---VGERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPL 236 + +S+ VGER RE +F + + K +V +E P R L Sbjct: 168 EHSGLSVFAGVGERTREGNDFYFEMQEAGVVNVDKFDESKVAMVYGQMNEPPGNRLRVAL 227 Query: 237 TAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 T +T+AE F +G +VLL +D+I R+ + E++ G +P A GY ++ E+ L ER Sbjct: 228 TGLTMAEKFRDEGKDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQER 287 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 I + + G+IT++ +V V D+ DP + + LD +VL+R +A +G YP +DPL S Sbjct: 288 I--TSTKTGSITSIQAVYVPADDLTDPSPATTFAHLDSTVVLSRDIAAKGIYPAIDPLDS 345 Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 SR D E + ++ R++E +DI I G Sbjct: 346 SSRQLDPLIIGQEHYDTARGVQSVLQRYKELKDIIAILG 384 >gi|212224904|ref|YP_002308140.1| V-type ATP synthase subunit B [Thermococcus onnurineus NA1] gi|229558451|sp|B6YV15|VATB_THEON RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|212009861|gb|ACJ17243.1| archaeal/vacuolar-type H+-ATPase, subunit B [Thermococcus onnurineus NA1] Length = 465 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 110/393 (27%), Positives = 192/393 (48%), Gaps = 28/393 (7%) Query: 19 LVVQGGYISSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYIC 73 +++ G S+++ +Y + + + V G+ V + GQV+ R ++ IV + Sbjct: 1 MLMPGMEYSTVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEARQDMAIVQVF 60 Query: 74 PVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMS 130 +I + F ++ S GRV N +GKPIDG + + D+ ++ Sbjct: 61 EGTRDLDIKTTRVRFTGETLKVPVSMDMLGRVFNGIGKPIDGGPEIIPEDRRDVHGAPLN 120 Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------ 184 V A R ++ TG+ ID L GQ++ +F+GSG+ + L + AR Sbjct: 121 PVARAYPRDFIQ----TGVSAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGE 176 Query: 185 -DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIA 242 + F V+ + +G E F + + ++++V+ + +D+ I R + P A+T+A Sbjct: 177 EEQF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVA 235 Query: 243 EYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 EY + D VL+IL +T +A ++REI+ E+P RGYP ++++L + ER G Sbjct: 236 EYLAFDYDMQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVR 295 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 +KG+IT + + + D+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 296 GKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRELYRKGIYPPIDVLPSLSRLM 355 Query: 362 D----KAWSADEKKLVSSLTHLIHRFEETRDIR 390 K + D+ +S L + E R +R Sbjct: 356 KDGIGKGRTRDDHPQLSQ--QLYAAYAEGRSLR 386 >gi|184127841|gb|ACC67820.1| ATP synthase beta chain [Danaea nodosa] Length = 402 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 15 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSSPAFTQLDTKLSIFETGIKVVDLLAPYRR 72 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 73 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 132 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 133 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 192 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 193 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 250 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 251 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 309 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 310 QDIIAILG 317 >gi|183206514|gb|ACC54455.1| ATP synthase beta subunit [Codonopsis kawakamii] Length = 478 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 84 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 140 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 201 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 260 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 318 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R+ Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRY 378 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 379 KELQDIITILG 389 >gi|213963371|ref|ZP_03391627.1| ATP synthase F1, beta subunit [Capnocytophaga sputigena Capno] gi|213954039|gb|EEB65365.1| ATP synthase F1, beta subunit [Capnocytophaga sputigena Capno] Length = 502 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 102/330 (30%), Positives = 158/330 (47%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G +DG +L K GD + I + P + TGI+VID+ P G Sbjct: 89 GRLFNVIGDGVDGLGNLPKDGDNGLPIHREAPKFEELSTTTEVLFTGIKVIDLIEPYAKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE IE + G Sbjct: 149 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMIESGIIKYG 208 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D K+ V +E P R L+ +TIAEYF Sbjct: 209 DAFVESMEKGGWDLSKVDRKVLKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 268 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + + G Sbjct: 269 EGQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKHG 326 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 327 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 386 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + + L+ +++ +DI I G Sbjct: 387 LGKEHYECAQRVKELLQHYKQLQDIIAILG 416 >gi|14521959|ref|NP_127436.1| V-type ATP synthase subunit B [Pyrococcus abyssi GE5] gi|12585510|sp|Q9UXU8|VATB_PYRAB RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|5459179|emb|CAB50665.1| atpB archaeal/vacuolar-type H+-transporting ATP synthase, subunit B [Pyrococcus abyssi GE5] Length = 465 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 103/351 (29%), Positives = 175/351 (49%), Gaps = 22/351 (6%) Query: 27 SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81 S+I+ +Y + + + V G+ V + GQV+ R NL IV + ++ Sbjct: 9 STISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDV 68 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138 + F ++ S GR+ N +GKPIDG + + D+ ++ V A R Sbjct: 69 KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 128 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191 ++ TGI ID L GQ++ +F+GSG+ + L + AR + F V+ Sbjct: 129 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF-AVV 183 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 + +G E F + + ++++V+ + +D+ I R + P A+T+AEY + D Sbjct: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243 Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VL+IL +T + ++REI+ E+P RGYP ++++L + ER G +KG+IT Sbjct: 244 MQVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGKKGSITQ 303 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + + D+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354 >gi|260584736|ref|ZP_05852482.1| V-type sodium ATPase, B subunit [Granulicatella elegans ATCC 700633] gi|260157759|gb|EEW92829.1| V-type sodium ATPase, B subunit [Granulicatella elegans ATCC 700633] Length = 458 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 95/317 (29%), Positives = 163/317 (51%), Gaps = 15/317 (4%) Query: 60 GQVIRINLDI----VYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ ++ D ++ P GI I + F ++ S GR+ + +G IDG Sbjct: 42 GQVLEVHEDKAMVQIFEGPSGIN--IRDSKVRFKGKPLSLNVSEDMVGRIFDGMGNVIDG 99 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 L + S+++ + ++R ++ +TGI ID L GQ++ VF+GSG+ Sbjct: 100 GPEL-LPEASLDVNGQAINPVSRDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHK 158 Query: 176 TLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228 L + AR SD V+ + +G E F+ED+ + +SV+ + +++ Sbjct: 159 ELAAQIARQATVLNSDEKFAVVFAAMGITFDEAEYFMEDFRKTGAIDRSVMFINLANDPA 218 Query: 229 ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 I R P A+T AEY + + D +VL+I+ +T + ++REI+ E+P RGYP ++ Sbjct: 219 IERIATPKIALTTAEYLAYEKDMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLY 278 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + L L ER G KG++T + + + D+ PI D I +G I+L+R+L ++G Sbjct: 279 TNLSTLYERAGRLVGRKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILDRALDKQGI 338 Query: 348 YPPVDPLASVSRLADKA 364 PP++ L S+SRL DK Sbjct: 339 QPPINVLPSLSRLKDKG 355 >gi|113910780|gb|ABI48122.1| ATPase beta subunit [Lepidozia reptans] Length = 472 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 163/312 (52%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 198 Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + D N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 VIDEQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 258 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 376 YKELQDIIAILG 387 >gi|203033|gb|AAA40778.1| F1-ATPase beta subunit [Rattus norvegicus] Length = 358 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 14 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 72 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE + D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 73 NDLYHEMIESGVIKVKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 132 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 133 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 190 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 191 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 250 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++H ++ +DI I G Sbjct: 251 RGVQKILHVYKSLQDIIAILG 271 >gi|160940090|ref|ZP_02087435.1| hypothetical protein CLOBOL_04979 [Clostridium bolteae ATCC BAA-613] gi|158436670|gb|EDP14437.1| hypothetical protein CLOBOL_04979 [Clostridium bolteae ATCC BAA-613] Length = 457 Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 94/311 (30%), Positives = 159/311 (51%), Gaps = 16/311 (5%) Query: 98 SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S R+ + +GKPIDG D L + + + + P A R E+ +TG+ ID Sbjct: 82 SEDMLSRMFDGMGKPIDGGPDILPEKRMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ +F+ SG+ + L + AR +D V+ + +G E F+E + Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTDESFAVVFAAMGITFEEANFFMESFR 199 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268 + +SV+ + +++ + R P A+T AEY + K +VL+IL IT +A S+RE Sbjct: 200 ETGAIDRSVMFINLANDPAVERIATPRMALTAAEYLAFEKNMHVLVILTDITNYADSLRE 259 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I+ E+P RGYP ++++L L ER G + + G+IT + + + D+ PI D Sbjct: 260 ISAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKNGSITMIPILTMPEDDKTHPIPDLT 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383 I +G I+L+R L + PP+D L S+SRL DK AD +++ L R Sbjct: 320 GYITEGQIILSRELYRKNVTPPIDVLPSLSRLKDKGIGEGKTRADHADVMNQLFAAYARG 379 Query: 384 EETRDIRLIGG 394 ++ +++ +I G Sbjct: 380 KDAKELMIILG 390 >gi|183206508|gb|ACC54452.1| ATP synthase beta subunit [Codonopsis dicentrifolia] Length = 478 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 91 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 147 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 208 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 267 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 325 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R+ Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRY 385 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 386 KELQDIITILG 396 >gi|198274977|ref|ZP_03207509.1| hypothetical protein BACPLE_01136 [Bacteroides plebeius DSM 17135] gi|198272424|gb|EDY96693.1| hypothetical protein BACPLE_01136 [Bacteroides plebeius DSM 17135] Length = 509 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 102/327 (31%), Positives = 162/327 (49%), Gaps = 45/327 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N +G IDG L K D I + P + ++ TGI+VID+ P G Sbjct: 96 GRVMNVVGDTIDGMKELDKTD-GFPIHREPPKFEDLATTQEVLFTGIKVIDLLEPYLKGG 154 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 155 KIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 212 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSK- 248 GD KS+ +V +E P R+ L+ +T+AE F + Sbjct: 213 GDEFLKSMEEGNWDLSKVDYNEVEKSQVAMVFGQMNEPPGARQSVALSGLTLAESFRDRQ 272 Query: 249 -GDN----VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 GDN +L +D+I RF + E++ G +P A GY ++ +E+ ++ ERI + + Sbjct: 273 TGDNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TSTK 330 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 331 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLDSTSRILDP 390 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389 E + + ++ R +E +DI Sbjct: 391 LIVGKEHYETAQRVKQILQRNKELQDI 417 >gi|61196962|gb|AAX39466.1| ATP synthase beta subunit [Lamprothamnium heraldii] Length = 402 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTTITFPIHRAAPAFTQLDTQLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|119944239|ref|YP_941919.1| F0F1 ATP synthase subunit beta [Psychromonas ingrahamii 37] gi|190358213|sp|A1SS55|ATPB1_PSYIN RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|119862843|gb|ABM02320.1| ATP synthase F1, beta subunit [Psychromonas ingrahamii 37] Length = 485 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 95/293 (32%), Positives = 151/293 (51%), Gaps = 11/293 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 R+ + G ID L ++ + + PP ++++ + F TGI+VID+ PL G Sbjct: 94 RMFDVFGNTIDNGPLLN--NVQWRSVHRAPPTLSQRSTQSEIFVTGIKVIDVLVPLERGG 151 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ LL+ + IS+ +GER RE E + E L V Sbjct: 152 KAGLFGGAGVGKTVLLTEMIHNMVSHHNGISIFCGIGERSREGEELYREMKEAGVLPNMV 211 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 ++ +E P R A+T+AEYF + +VLL++D+I RF + EI+ G++P Sbjct: 212 MIFGQMNEPPGARFRVGHAALTMAEYFRDDESRDVLLLIDNIFRFIQAGSEISGLMGQMP 271 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ SEL L ERI + E G IT++ +V V D+ DP A S L IV Sbjct: 272 SRLGYQPTMGSELSSLEERI--ANTEDGAITSIQAVYVPADDFTDPAAVHTFSHLSASIV 329 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R A EG YP +DPL S S++A + L + + ++++ +DI Sbjct: 330 LSRQRASEGLYPSIDPLQSSSKMATAGIIGERHYNLAQEVRRTLAKYDDLKDI 382 >gi|33863718|ref|NP_895278.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT 9313] gi|81835692|sp|Q7V5U2|ATPB_PROMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|33635301|emb|CAE21626.1| ATP synthase beta subunit, central region [Prochlorococcus marinus str. MIT 9313] Length = 488 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + D + I P + F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVTT-DATAPIHRPSPKLTELETKPTVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 SDDLSKSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + + DE + S+ + R++E Sbjct: 334 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARSVQATLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|255994419|ref|ZP_05427554.1| V-type sodium ATPase, B subunit [Eubacterium saphenum ATCC 49989] gi|255993132|gb|EEU03221.1| V-type sodium ATPase, B subunit [Eubacterium saphenum ATCC 49989] Length = 457 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 95/316 (30%), Positives = 162/316 (51%), Gaps = 13/316 (4%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLV--FHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+V+ I+ D + I+L D F + S GRV + LG+PID Sbjct: 42 GKVLEIDADRAMVQVFEGSSGINLPDTTVRFLGHPLELGVSEDMIGRVFDGLGRPIDDGP 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L D+ M+I ++R + +TGI ID L GQ++ +F+GSG+ + + Sbjct: 102 KLVP-DMKMDINGAPINPVSRDYPSEFIQTGISCIDGLNTLVRGQKLPIFSGSGLPHNNV 160 Query: 178 LSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + AR ++ F V+ + +G E + F+++ + +SV+ + +D+ I Sbjct: 161 AAQIARQAQVLGQNEKF-MVVFAAMGITFEESKFFVDNLTETGAIDRSVLFINLADDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEYF+ KG VL+I+ IT +A ++RE++ E+P RGYP +++ Sbjct: 220 ERIATPKMALTCAEYFAFEKGMQVLVIMTDITNYADALREVSAARKEVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L + ER G + G+IT + + + D+ PI D I +G I+L+R L ++G Sbjct: 280 DLAGMYERAGKISGKPGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELHKKGNN 339 Query: 349 PPVDPLASVSRLADKA 364 PP++ + S+SRL DK Sbjct: 340 PPINIVPSLSRLKDKG 355 >gi|307343660|emb|CBJ19247.1| atpD synthase beta subunit [Micromonospora rosaria] Length = 302 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGDLQERITSVRGQA--ITSLQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|139522643|gb|ABO77725.1| ATP synthase beta subunit [Burmeistera cyclostigmata] Length = 498 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + S+ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQSVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|113910806|gb|ABI48135.1| ATPase beta subunit [Odontoschisma denudatum] Length = 454 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 184 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 243 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 361 KELQDIIAILG 371 >gi|293369732|ref|ZP_06616308.1| ATP synthase F1, beta subunit [Bacteroides ovatus SD CMC 3f] gi|292635154|gb|EFF53670.1| ATP synthase F1, beta subunit [Bacteroides ovatus SD CMC 3f] Length = 510 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 52/330 (15%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCH 160 GR++N +G IDG L KG S+ + PP + V++ TGI+VID+ P Sbjct: 93 GRLMNVVGDSIDGMKGLDRKGAYSIH---RDPPKFEDLTTVQEVLFTGIKVIDLLEPYAK 149 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE---- 207 G +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 150 GGKIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVI 207 Query: 208 --------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF 245 DY + L+KS V + +E P R L+ +T+AE F Sbjct: 208 RYGEAFKEGMEKGHWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESF 265 Query: 246 SSKGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 266 RDAGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--T 323 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 KG+IT+V +V V D+ DP + S LD VL+R + E G YP VDPLAS SR+ Sbjct: 324 STRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRI 383 Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 D E + + ++ R +E +DI Sbjct: 384 LDPHIVGQEHYDVAQQVKQILQRNKELQDI 413 >gi|164566065|gb|ABY61175.1| ATP synthase beta subunit [Danaea cartilaginea] gi|164566073|gb|ABY61179.1| ATP synthase beta subunit [Danaea erecta] gi|164566099|gb|ABY61192.1| ATP synthase beta subunit [Danaea kalevala] gi|164566105|gb|ABY61195.1| ATP synthase beta subunit [Danaea longicaudata] Length = 394 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|124022212|ref|YP_001016519.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT 9303] gi|123962498|gb|ABM77254.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT 9303] Length = 532 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + D + I P + F+TGI+VID+ P Sbjct: 141 ATLGRIFNVLGEPVDEQGPVTT-DATAPIHRPAPKLTELETKPTVFETGIKVIDLLAPYR 199 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 200 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 259 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 260 SDDLSKSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 319 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 320 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 377 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R+LA +G YP VDPL S S + + DE + S+ + R++E Sbjct: 378 TFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARSVQATLQRYKEL 437 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 438 QDIIAILG 445 >gi|19033097|gb|AAL83533.1|AF408805_1 ATP synthase beta subunit [Chlorokybus atmophyticus] Length = 402 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 163/312 (52%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG + S + + PPA + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---NLGPVANKSTLPIHRDPPAFTELDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKESK 153 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 154 VINEENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQ 213 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 214 AGSEVSALLGRMPSAVGYQPTLSREMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 271 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R Sbjct: 272 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQRVKQTLQR 330 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 331 YKELQDIIAILG 342 >gi|164566063|gb|ABY61174.1| ATP synthase beta subunit [Danaea carillensis] gi|164566067|gb|ABY61176.1| ATP synthase beta subunit [Danaea crispa] gi|164566093|gb|ABY61189.1| ATP synthase beta subunit [Danaea jenmanii] gi|164566095|gb|ABY61190.1| ATP synthase beta subunit [Danaea jenmanii] gi|164566097|gb|ABY61191.1| ATP synthase beta subunit [Danaea jenmanii] gi|164566107|gb|ABY61196.1| ATP synthase beta subunit [Danaea mazeana] gi|164566147|gb|ABY61216.1| ATP synthase beta subunit [Danaea urbanii] Length = 394 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|15674363|ref|NP_268537.1| V-type ATP synthase subunit B [Streptococcus pyogenes M1 GAS] gi|21909657|ref|NP_663925.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS315] gi|28895035|ref|NP_801385.1| V-type ATP synthase subunit B [Streptococcus pyogenes SSI-1] gi|50913525|ref|YP_059497.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS10394] gi|71909946|ref|YP_281496.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS5005] gi|94987765|ref|YP_595866.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS9429] gi|94989643|ref|YP_597743.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS10270] gi|94991634|ref|YP_599733.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS2096] gi|94993533|ref|YP_601631.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS10750] gi|139473008|ref|YP_001127723.1| V-type ATP synthase subunit B [Streptococcus pyogenes str. Manfredo] gi|306828172|ref|ZP_07461435.1| exopolyphosphatase [Streptococcus pyogenes ATCC 10782] gi|73920418|sp|Q7CFI7|VATB_STRP3 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|73920419|sp|Q5XE49|VATB_STRP6 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|73920439|sp|Q9A1Q2|VATB_STRP1 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|122987050|sp|Q1JIX4|VATB_STRPD RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|123080270|sp|Q1JDW9|VATB_STRPB RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|123080440|sp|Q1JNS7|VATB_STRPC RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|123257658|sp|Q1J8S4|VATB_STRPF RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|167016638|sp|A2RC98|VATB_STRPG RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|13621450|gb|AAK33258.1| putative V-type Na+ -ATPase subunit B [Streptococcus pyogenes M1 GAS] gi|21903839|gb|AAM78728.1| putative V-type Na+ -ATPase subunit B [Streptococcus pyogenes MGAS315] gi|28810280|dbj|BAC63218.1| putative V-type Na+ -ATPase subunit B [Streptococcus pyogenes SSI-1] gi|50902599|gb|AAT86314.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes MGAS10394] gi|71852728|gb|AAZ50751.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes MGAS5005] gi|94541273|gb|ABF31322.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes MGAS9429] gi|94543151|gb|ABF33199.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes MGAS10270] gi|94545142|gb|ABF35189.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes MGAS2096] gi|94547041|gb|ABF37087.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes MGAS10750] gi|134271254|emb|CAM29470.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes str. Manfredo] gi|304429709|gb|EFM32755.1| exopolyphosphatase [Streptococcus pyogenes ATCC 10782] Length = 471 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 167/334 (50%), Gaps = 13/334 (3%) Query: 41 QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98 Y L D +H G+ GQV+ + D +V + G ++ + F ++ S Sbjct: 27 HYNELVDITLHNGERRK--GQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVS 84 Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ + +G+PIDG L + ++I + + R ++ +TGI ID L Sbjct: 85 EDMVGRIFDGMGQPIDGGPELIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212 GQ++ VF+GSG+ + L + AR SD V+ + +G E F+ D Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDDNFAVVFAAMGITFEEAEFFMNDLRET 203 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270 + +SV+ + +++ I R P A+T AEY + KG +VL+I+ +T + ++RE++ Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKGMHVLVIMTDMTNYCEALREVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P RGYP +++ L L ER G +KG++T + + + D+ PI D Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLIGKKGSVTQIPILTMPEDDITHPIPDLTGY 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L++ L + G PP++ L S+SRL DK Sbjct: 324 ITEGQIILSQELYKNGFRPPINVLPSLSRLKDKG 357 >gi|160884429|ref|ZP_02065432.1| hypothetical protein BACOVA_02413 [Bacteroides ovatus ATCC 8483] gi|299146013|ref|ZP_07039081.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_23] gi|156110168|gb|EDO11913.1| hypothetical protein BACOVA_02413 [Bacteroides ovatus ATCC 8483] gi|298516504|gb|EFI40385.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_23] Length = 506 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 163/330 (49%), Gaps = 52/330 (15%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCH 160 GR++N +G IDG L KG S+ + PP + V++ TGI+VID+ P Sbjct: 93 GRLMNVVGDSIDGMKGLDRKGAYSIH---RDPPKFEDLTTVQEVLFTGIKVIDLLEPYAK 149 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE---- 207 G +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 150 GGKIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVI 207 Query: 208 --------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF 245 DY + L+KS V + +E P R L+ +T+AE F Sbjct: 208 RYGEAFKEGMEKGHWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESF 265 Query: 246 SSKGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 266 RDAGKEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--T 323 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 KG+IT+V +V V D+ DP + S LD VL+R + E G YP VDPLAS SR+ Sbjct: 324 STRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRI 383 Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 D E + + ++ R +E +DI Sbjct: 384 LDPHIVGQEHYDVAQQVKQILQRNKELQDI 413 >gi|124302913|ref|YP_001023708.1| ATP synthase CF1 beta subunit [Angiopteris evecta] gi|190358253|sp|A2T340|ATPB_ANGEV RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|110628311|gb|ABG79607.1| ATP synthase CF1 beta subunit [Angiopteris evecta] Length = 492 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + K PA + + F+TGI+V+D+ P Sbjct: 105 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 162 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 222 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 223 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ +SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 341 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 399 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 400 QDIIAILG 407 >gi|156618911|ref|YP_001430047.1| ATP synthase CF1 beta subunit [Cuscuta gronovii] gi|75330427|sp|Q8MBG3|ATPB_CUSGR RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21633451|gb|AAM52200.1| ATP synthase beta subunit [Cuscuta gronovii] gi|156555949|emb|CAM98333.1| ATP synthase CF1 beta chain [Cuscuta gronovii] Length = 494 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 154/306 (50%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + LS I PP + F+TGI+V+D+ P G Sbjct: 104 LGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLKLDTRLSIFETGIKVVDLLAPYRRG 162 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGDNL 214 ++G+F G+G+GK+ L+ + + VGER RE E E + + Sbjct: 163 GKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGGVGERTREGNDLYMEMKESGVINQQ 222 Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 223 KLDESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFIDNIFRFVQAGSEV 282 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 340 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RSLA +G YP VDPL S S + ++ K + + R++E +D Sbjct: 341 AHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQIVGEQHYKTAQRVKQTLQRYKELQD 400 Query: 389 IRLIGG 394 I I G Sbjct: 401 IIAILG 406 >gi|46909271|gb|AAT06153.1| ATP synthase beta subunit [Monosiga brevicollis] Length = 426 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 158/309 (51%), Gaps = 20/309 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR++N +G+PID + K D I ++ P + + + +TGI+V+D+ P Sbjct: 62 ATLGRIMNVIGEPIDERGPI-KADKYAPIHAEAPELEDMRPEAEILETGIKVVDLLAPYA 120 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ L+ + A++ V VGER RE + + + Sbjct: 121 KGGKIGLFGGAGVGKTVLIMELINNVAKAHSGFSVFAG-VGERTREGNDLYHEMIEGGVI 179 Query: 211 ---GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 GD+ K +V +E P R LT +T+AE F +G +VLL +D+I RF Sbjct: 180 QLEGDS--KVALVYGQMNEPPGARARVALTGLTVAESFRDQGRDVLLFIDNIFRFTQDGS 237 Query: 268 EI-ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E+ A G +P A GY ++ +++ + ERI + G+IT+V +V V D+ DP Sbjct: 238 EVSALFLGRIPSAVGYQPTLATDMGAMQERI--TTTTVGSITSVQAVYVPADDLTDPAPA 295 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R +AE G YP VDPL S SR+ D + + K + ++ ++ Sbjct: 296 TTFAHLDATTVLSRGIAELGIYPAVDPLDSTSRILDVSVVGERHYKTARDVQKILQDYKS 355 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 356 LQDIIAILG 364 >gi|307343664|emb|CBJ19249.1| atpD synthase beta subunit [Micromonospora sagamiensis] Length = 309 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKRQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|164566049|gb|ABY61167.1| ATP synthase beta subunit [Danaea acuminata] gi|164566075|gb|ABY61180.1| ATP synthase beta subunit [Danaea falcata] Length = 394 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|324986519|ref|YP_004276389.1| ATP synthase CF1 beta subunit [Pinus nelsonii] gi|323522707|gb|ADX94955.1| ATP synthase CF1 beta subunit [Pinus nelsonii] Length = 492 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 104/319 (32%), Positives = 162/319 (50%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARIKSPIHRPAPTFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|12585392|sp|O06505|VATB_DESSY RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B Length = 463 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 103/351 (29%), Positives = 176/351 (50%), Gaps = 22/351 (6%) Query: 27 SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81 S+++ +Y + + + V G+ V + GQV+ R NL IV + ++ Sbjct: 7 STVSKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLEARENLAIVQVFEGTRDLDV 66 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138 + F ++ S GR+ N +GKPIDG + + D+ ++ V A R Sbjct: 67 KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 126 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191 ++ TGI ID L GQ++ +F+GSG+ + L + AR + F V+ Sbjct: 127 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQF-AVV 181 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 + +G E F + + ++++V+ + +D+ I R + P A+T+AEY + D Sbjct: 182 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 241 Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VL+IL +T +A ++REI+ E+P RGYP ++++L + ER G +KG+IT Sbjct: 242 MQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERGGRVRGKKGSITQ 301 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + + D+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 302 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 352 >gi|307343684|emb|CBJ19259.1| atpD synthase beta subunit [Micromonospora sp. GUI15] Length = 302 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 85/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTDSGVINKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKPEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + E ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|183206500|gb|ACC54448.1| ATP synthase beta subunit [Canarina canariensis] Length = 480 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSG 202 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 203 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R+ Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIISDEHYETAQSVKQTLQRY 380 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 381 KELQDIITILG 391 >gi|62902871|gb|AAY19350.1| ATP synthase beta subunit [Larrea tridentata] Length = 474 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 203 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKETLQRY 380 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 381 KELQDIIAILG 391 >gi|7525040|ref|NP_051066.1| ATP synthase CF1 beta subunit [Arabidopsis thaliana] gi|6686269|sp|P19366|ATPB_ARATH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|5881701|dbj|BAA84392.1| ATPase beta subunit [Arabidopsis thaliana] Length = 498 Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|288925053|ref|ZP_06418989.1| ATP synthase F1, beta subunit [Prevotella buccae D17] gi|315608092|ref|ZP_07883085.1| ATP synthase F1 sector beta subunit [Prevotella buccae ATCC 33574] gi|288338243|gb|EFC76593.1| ATP synthase F1, beta subunit [Prevotella buccae D17] gi|315250561|gb|EFU30557.1| ATP synthase F1 sector beta subunit [Prevotella buccae ATCC 33574] Length = 508 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 99/340 (29%), Positives = 159/340 (46%), Gaps = 41/340 (12%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 R+ GR++N +G+PIDG L + + I + P ++ TGI+VI Sbjct: 85 IRMPAGEQIKGRMMNVIGQPIDGMKQLDM-EGAYPIHREAPKFDELSTHKEMLATGIKVI 143 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDY 209 D+ P G +IG+F G+G+GK+ L+ + + + VGER RE + I D Sbjct: 144 DLLEPYMKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDM 203 Query: 210 L-------GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTI 241 L G+ +K++ +V +E P R L+ +T+ Sbjct: 204 LESGVIKYGEKFRKAMDEGKWDLSLVDPEELSKSQATLVYGQMNEPPGARASVALSGLTV 263 Query: 242 AEYFSSKGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 AE F G +++ +D+I RF + E++ G +P A GY ++ SE+ + E Sbjct: 264 AEEFRDHGGKDGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGSMQE 323 Query: 296 RIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 RI + +KG+IT+V +V V D+ DP + + LD L+R +AE G YP VDPL Sbjct: 324 RI--TSTKKGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKIAELGIYPAVDPLG 381 Query: 356 SVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 S SR+ D E + + L+ R+ E +DI I G Sbjct: 382 STSRILDPLIVGKEHYECAQRVKQLLQRYNELQDIIAILG 421 >gi|16416734|gb|AAL18391.1|AF313543_1 ATP synthase beta chain [Angiopteris lygodiifolia] gi|149384675|gb|ABR25146.1| ATP synthase beta chain [Angiopteris evecta] gi|164566045|gb|ABY61165.1| ATP synthase beta subunit [Archangiopteris itoi] gi|164566151|gb|ABY61218.1| ATP synthase beta subunit [Angiopteris smithii] Length = 394 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ +SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|307343644|emb|CBJ19239.1| atpD synthase beta subunit [Micromonospora mirobrigensis] Length = 302 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E V++ + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|300777877|ref|ZP_07087735.1| ATP synthase F1 sector beta subunit [Chryseobacterium gleum ATCC 35910] gi|300503387|gb|EFK34527.1| ATP synthase F1 sector beta subunit [Chryseobacterium gleum ATCC 35910] Length = 502 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 40/329 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G IDG + K D + I P + TGI+VID+ P G Sbjct: 91 GRLFNVVGDAIDGLQDISK-DGGLPIHRPAPKFDQLSTSAEVLFTGIKVIDLVEPYAKGG 149 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + GD Sbjct: 150 KIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYGD 209 Query: 213 NL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF-----S 246 + K+ V +E P R L+ +T+AEY+ S Sbjct: 210 DFMHSMENGGWDLSKVDLEAMKDSKAAFVFGQMNEPPGARARVALSGLTLAEYYRDGGES 269 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G +VL +D+I RF + E++ G +P A GY ++ SE+ + ERI + + G+ Sbjct: 270 GQGRDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKNGS 327 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAW 365 IT+V +V V D+ DP + + LD VL+R +A G YP VDPLAS SR LA + Sbjct: 328 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLDRKIASLGIYPAVDPLASTSRILAPEVI 387 Query: 366 SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 D + ++ R++ +DI I G Sbjct: 388 GHDHYNCAQRVKEILQRYKALQDIIAILG 416 >gi|171704669|sp|A1RX20|VATB_THEPD RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B Length = 460 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 102/357 (28%), Positives = 178/357 (49%), Gaps = 17/357 (4%) Query: 53 GKNS-DNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALG 110 GK+S + G+V+ ++ + +G E + L+ F F+I S GRV N Sbjct: 36 GKDSRERFGRVLETSIGQAVVQVLGDREGLETDTLLKFTGSTFKIRVSEDVIGRVFNGRF 95 Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170 +PIDG + G+L EI + ++R+ +TG+ ID + GQ++ +F+ S Sbjct: 96 EPIDGLPPILSGELR-EITGEPINPISREYPHDFIQTGVSAIDGLFSMVRGQKLPIFSVS 154 Query: 171 GIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223 G+ + L + AR V+ + +G R E F+E + +++ V V+ Sbjct: 155 GLPHNLLAAQVARQATVRGEGEQFAVVFAGIGLRKTEAEFFLEQFRETGAIERLVAVLNM 214 Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGY 282 +D+ + R M P A+T+AEY + D +VL+I+ +T + ++RE+++ GE+P GY Sbjct: 215 ADDPAVERLMTPRIALTVAEYLAFDLDMHVLVIMSDMTNYCEALREVSSARGEIPGRLGY 274 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P ++S+L + ER G + +KG+IT + + G + PI D I +G I L++ + Sbjct: 275 PGYMYSDLATIYERAGVIKGKKGSITLFPILTMPGGDLRHPIPDLTGYITEGQIFLSQEM 334 Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDI-RLIG 393 +G YPP++ L S+SRL D + L L R + RD+ R+IG Sbjct: 335 YAQGIYPPINILPSLSRLMKSGIGPGKTREDHRYLADQLYDAYSRGVKARDLARIIG 391 >gi|164566115|gb|ABY61200.1| ATP synthase beta subunit [Danaea nodosa] gi|164566117|gb|ABY61201.1| ATP synthase beta subunit [Danaea nodosa] gi|164566119|gb|ABY61202.1| ATP synthase beta subunit [Danaea nodosa] gi|164566121|gb|ABY61203.1| ATP synthase beta subunit [Danaea nodosa] gi|164566123|gb|ABY61204.1| ATP synthase beta subunit [Danaea nodosa] Length = 394 Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSSPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|307343630|emb|CBJ19232.1| atpD synthase beta subunit [Micromonospora echinospora] Length = 302 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 87/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAISVPADH 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + + ++ S + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVASEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|21684923|emb|CAD11588.1| ATP synthase beta subunit [Xyris involucrata] Length = 482 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 102/308 (33%), Positives = 157/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S I P + + + F+TGI+V+D+ P Sbjct: 90 LGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPTFIELETRLEIFETGIKVVDLLAPYR 146 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYVEMKESGVIN 206 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF + Sbjct: 207 EKNLTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGS 266 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 267 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 324 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S L + + + + + R++E Sbjct: 325 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKETLQRYKEL 384 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 385 QDIIAILG 392 >gi|87082848|gb|ABD18900.1| NtpB [Caloramator fervidus] Length = 461 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 95/318 (29%), Positives = 161/318 (50%), Gaps = 17/318 (5%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+V+ IN D ++ + G + + F + S GRV + LG+P DG Sbjct: 42 GKVLEINGDKALIQLFESSAGINLQGSKVRFLGKTLELGVSIDMLGRVFDGLGRPKDGGP 101 Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + K D++ ++ V R + +TGI ID L GQ++ +F+GSG+ Sbjct: 102 KIIPEKKLDINGNPLNPVA----RDYPSEFIQTGISAIDGLNTLVRGQKLPIFSGSGLPH 157 Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 S L + AR +D V+ + +G E FI D+ + ++V+ + +++ Sbjct: 158 SRLAAQIARQARVLNADSKFAVVFAAMGITFEEAEFFISDFKKTGAIDRAVLFINLANDP 217 Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 I R P A+T AE+ + KG +VL+I+ +T + ++REI+ E+P RGYP + Sbjct: 218 AIERIATPRMALTTAEFLAFEKGMHVLVIMTDMTNYCEALREISAARKEVPGRRGYPGYL 277 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L L ER G + ++G+IT + + + D+ PI D I +G I+L+R L +G Sbjct: 278 YTDLSTLYERAGKIKGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYRKG 337 Query: 347 RYPPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 338 VNPPIDVLPSLSRLKDKG 355 >gi|78186925|ref|YP_374968.1| F0F1 ATP synthase subunit beta [Chlorobium luteolum DSM 273] gi|123743669|sp|Q3B406|ATPB2_PELLD RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|78166827|gb|ABB23925.1| ATP synthase F1, beta subunit [Chlorobium luteolum DSM 273] Length = 468 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 154/293 (52%), Gaps = 11/293 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 R+ + G+PID D+ + ++PP + R+ F+TGI++ID+ +PL G Sbjct: 92 RMFDVFGRPID--RGAPPPDVEWRGVHRMPPPLGRRSTRSEVFETGIKIIDLLSPLERGG 149 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKKSVV 219 + G+F G+G+GK+ LL+ + +S+ +GER RE E D + S+V Sbjct: 150 KAGLFGGAGVGKTVLLTEMIHNMVHRHHGVSIFCGIGERCREGEELYRDMRDAGVLDSMV 209 Query: 220 VV-ATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R L A+T+AEYF + ++VLL++D+I RF + EI+ G++P Sbjct: 210 MVFGQMNEPPGSRFRVGLAALTMAEYFRDDQHEDVLLLIDNIFRFIQAGSEISGMMGQMP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +EL +L ERI + G IT++ +V V D+ DP A S L + Sbjct: 270 SRLGYQPTMGTELSQLEERI--ANTGTGAITSIQAVYVPADDFTDPAAVHTFSHLSASLT 327 Query: 338 LNRSLAEEGRYPPVDPLASVSRL-ADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L+R A EG +P +DPL S S++ A L + ++ ++ E +DI Sbjct: 328 LSRKRAGEGFFPAIDPLQSGSKMTAPSIIGRRHYDLSRQIRRVLAQYSELKDI 380 >gi|184127875|gb|ACC67837.1| ATP synthase beta chain [Archangiopteris itoi] Length = 399 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + K PA + + F+TGI+V+D+ P Sbjct: 12 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 69 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 70 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 129 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 130 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 189 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ +SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 190 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 247 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 248 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 306 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 307 QDIIAILG 314 >gi|164566113|gb|ABY61199.1| ATP synthase beta subunit [Danaea nodosa] Length = 394 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|154496323|ref|ZP_02035019.1| hypothetical protein BACCAP_00611 [Bacteroides capillosus ATCC 29799] gi|150274406|gb|EDN01483.1| hypothetical protein BACCAP_00611 [Bacteroides capillosus ATCC 29799] Length = 459 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 148/283 (52%), Gaps = 11/283 (3%) Query: 98 SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV N +G+PIDG + L + + ++ P A R + +TGI ID Sbjct: 82 SGDMLGRVFNGMGRPIDGGPEILAEERRDINGLAMNPAA--RDYPNEFIQTGISTIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR-SDCFD-----KVIISLVGERGREVREFIEDYL 210 L GQ++ +F+GSG+ + L + AR + D V+ + +G E F+E++ Sbjct: 140 TLVRGQKLPIFSGSGLPHAALAAQIARQAKVLDGASNFAVVFAAIGITFEESNFFVEEFR 199 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268 + ++V+ +++ + R P A+T AEY + KG +VL+IL IT +A ++RE Sbjct: 200 RTGAIDRTVLFTNLANDPAVERISTPRMALTAAEYLAFEKGMHVLVILTDITNYAEALRE 259 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ E+P RGYP ++++L + ER G G+IT + + + D+ PI D Sbjct: 260 VSAAKKEVPGRRGYPGYLYTDLATMYERAGRRLGCPGSITMIPILTMPEDDKTHPIPDLT 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 I +G I+L+R L +G PPVD L S+SRL DK A + + Sbjct: 320 GYITEGQIILSRELFRKGIIPPVDVLPSLSRLKDKGIGAGKTR 362 >gi|61968331|gb|AAX57092.1| ATP synthase beta subunit [Drypetes madagascariensis] Length = 478 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D ++ I P + F+TGI+V+D+ Sbjct: 92 GATLGRIFNVLGEPVD---DLGPVDTRITSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 G+N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 209 VINGENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L K + + + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGKEHYETAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|302567347|gb|ADL41372.1| ATP synthase B subunit [Stichococcus sp. CU336] Length = 366 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P ++ F+TGI+V+D+ P Sbjct: 19 ATLGRIFNVLGEPVD---NLGPVDNKEGLPIHRSAPAFVDLDTKLAIFETGIKVVDLLAP 75 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 76 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 135 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 136 IDQDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 195 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ SE+ +L ERI + + G+IT++ +V V D+ DP Sbjct: 196 GSEVSALLGRMPSAVGYQPTLASEMGKLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 253 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + R+ Sbjct: 254 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYDCAQNVKETLQRY 312 Query: 384 EETRDIRLIGG 394 E +DI I G Sbjct: 313 NELQDIIAILG 323 >gi|332665057|ref|YP_004447845.1| ATP synthase subunit beta [Haliscomenobacter hydrossis DSM 1100] gi|332333871|gb|AEE50972.1| ATP synthase subunit beta [Haliscomenobacter hydrossis DSM 1100] Length = 501 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 106/333 (31%), Positives = 164/333 (49%), Gaps = 46/333 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N +G+ IDG + + D S + + PPA K TGI+VID+ P Sbjct: 88 GRLFNVVGQAIDG---IPQPDGSQVYPIHRKPPAYEDLSTNKEILYTGIKVIDLIEPYMK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIE------ 207 G +IG+F G+G+GK+ L+ + +D + + + VGER RE +RE +E Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKGYDGISVFAGVGERTREGNDLMREMLEAGIINY 204 Query: 208 -------------DYLG---DNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFS--- 246 D G D+LK K+ V +E P R L+ +TIAEY+ Sbjct: 205 GEKFMHSMEEGGWDLSGVTVDDLKQSKATFVFGQMNEPPGARARVALSGLTIAEYYRDGD 264 Query: 247 ----SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 + G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 265 LSDPTGGRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGLMQERI--TST 322 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +G+IT+V +V V D+ DP + + LD VL+R +A G YP VDPL S SR+ D Sbjct: 323 RRGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIASLGIYPAVDPLDSTSRILD 382 Query: 363 KAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + +L+ R+ E +DI I G Sbjct: 383 PRIIGDEHYNTAQRVKNLLQRYNELQDIIAILG 415 >gi|111283716|gb|ABH09208.1| ATPase beta subunit [Triandrophyllum subtrifidum] Length = 470 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|158602259|gb|ABW74596.1| ATP synthase beta subunit [Ceratocephala pungens] Length = 497 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 109/366 (29%), Positives = 174/366 (47%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + E + G V + G + GR Sbjct: 49 KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVINTGAPLSVPVGGATLGR 108 Query: 105 VINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 + N LG+P+D + G S I P + F+TGI+V+D+ P G +I Sbjct: 109 IFNFLGEPVDNLGPVXTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKI 167 Query: 165 GVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------EDYL 210 G+F G+G+GK+ L+ + A++ V + ER RE + E+ L Sbjct: 168 GLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEENL 226 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269 G++ K +V +E P R LTA+T+AEYF + NVLL +D+I RF + E+ Sbjct: 227 GES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEV 284 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 285 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 342 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +E + + R++E +D Sbjct: 343 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQD 402 Query: 389 IRLIGG 394 I I G Sbjct: 403 IIAILG 408 >gi|184127871|gb|ACC67835.1| ATP synthase beta chain [Angiopteris evecta] Length = 402 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + K PA + + F+TGI+V+D+ P Sbjct: 15 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 72 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 73 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 132 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 133 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 192 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ +SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 193 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 250 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 251 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 309 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 310 QDIIAILG 317 >gi|119024938|gb|ABL59887.1| ATP synthase beta subunit [Chlainomonas kolii] Length = 366 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG K + ++ I P ++ F+TGI+V+D+ P Sbjct: 19 ATLGRIFNVLGEPVD---NLGPVKAEATLPIHRSAPAFVDLDTRLSIFETGIKVVDLLAP 75 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF--------- 205 G +IG+F G+G+GK+ L+ + +S+ VGER RE + Sbjct: 76 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGV 135 Query: 206 -IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +E L D+ K +V +E P R LTA+T+AE+F +VL +D+I RF Sbjct: 136 IVEKSLSDS--KVALVYGQMNEPPGARMRVALTALTMAEFFRDFNKQDVLFFIDNIFRFV 193 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ SE+ L ERI + + G+IT++ +V V D+ DP Sbjct: 194 QAGAEVSALLGRMPSAVGYQPTLASEMGVLQERI--TSTKDGSITSIQAVYVPADDLTDP 251 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 S LD VL+R LA +G YP V PL S S + + + EK + + + Sbjct: 252 APAVTFSHLDATTVLSRDLASKGIYPAVSPLESTSTML-QPFIVGEKHYNVAQDVKKTLQ 310 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 311 RYKELQDIIAILG 323 >gi|113910856|gb|ABI48160.1| ATPase beta subunit [Ceratodon purpureus] Length = 456 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 184 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 243 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 361 KELQDIIAILG 371 >gi|193237707|dbj|BAG50117.1| ATP synthase beta subunit [Takakia lepidozioides] gi|193237729|dbj|BAG50133.1| ATP synthase beta subunit [Takakia lepidozioides] Length = 492 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D+S + + PA + + F+TGI+V+D+ P Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 219 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 220 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|183206620|gb|ACC54508.1| ATP synthase beta subunit [Heterocodon rariflorum] Length = 484 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 90 GATLGRIFNVLGEPID---NLGPVDTLTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 205 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 206 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 265 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 266 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 323 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 324 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 383 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 384 YKELQDIITILG 395 >gi|113910874|gb|ABI48169.1| ATPase beta subunit [Leptobryum pyriforme] gi|113910876|gb|ABI48170.1| ATPase beta subunit [Bartramia pomiformis] Length = 472 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|113910788|gb|ABI48126.1| ATPase beta subunit [Solenostoma hyalinum] Length = 472 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTSFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQXNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|113910864|gb|ABI48164.1| ATPase beta subunit [Hymenostylium recurvirostre] Length = 472 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|20467373|gb|AAL27817.1| ATPase beta subunit [Ephedra intermedia] Length = 435 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 73 LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 129 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 130 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 189 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 190 EKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 249 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 250 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 307 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S L + ++ + + R++E Sbjct: 308 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRXXGEXHYEIAQEVKQTLQRYKEL 367 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 368 QDIIAILG 375 >gi|46360661|gb|AAS89112.1| ATP synthase beta subunit [Diplophyllum obtusifolium] gi|46360716|gb|AAS89139.1| ATP synthase beta subunit [Scapania nemorea] Length = 382 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 2 LGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 119 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 178 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 296 LQDIIAILG 304 >gi|55056894|emb|CAF21948.1| ATP synthase beta subunit [Hesperocyparis arizonica] Length = 443 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 104/366 (28%), Positives = 178/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLG---------DLVFHWGRFRISPSACWCGR 104 KN+D GQ I + ++ + +++ ++ G + GR Sbjct: 19 KNNDTTGQPISVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGGPLSVPVGETTLGR 78 Query: 105 VINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D L+ + + PA + + F+TGI+V+D+ P G Sbjct: 79 IFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAPYRRGG 135 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 136 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 194 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 195 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 254 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 255 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 312 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + + +E + + + R++E +D Sbjct: 313 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKELQD 372 Query: 389 IRLIGG 394 I I G Sbjct: 373 IIAILG 378 >gi|307343668|emb|CBJ19251.1| atpD synthase beta subunit [Micromonospora viridifaciens] Length = 320 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + + ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGQEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|7708446|emb|CAB89916.1| ATP synthase beta subunit [Impatiens repens] Length = 425 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 154/313 (49%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 90 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216 P G +IG+F G+G+G + L+ + +S+ G E + Y+ +KK Sbjct: 147 PYRRGGKIGLFGGAGVGXTVLIMELINNIAKAHGSVSVFGGXXERTPEXNDLYM--EMKK 204 Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262 S +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 205 SGVINEQNFGESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 264 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 265 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTD 322 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 323 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQ 382 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 383 RYKELQDIIAILG 395 >gi|184127869|gb|ACC67834.1| ATP synthase beta chain [Angiopteris evecta] Length = 400 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + K PA + + F+TGI+V+D+ P Sbjct: 13 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQLDTKLSIFETGIKVVDLSAPYRR 70 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 71 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 130 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 131 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 190 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ +SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 191 VSASSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 248 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 249 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 307 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 308 QDIIAILG 315 >gi|171462853|ref|YP_001796966.1| ATP synthase F1, beta subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|226740659|sp|B1XSD4|ATPB_POLNS RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|171192391|gb|ACB43352.1| ATP synthase F1, beta subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 466 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 154/305 (50%), Gaps = 18/305 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV-PPAMNRQRVEKG---FKTGIRVIDIF 155 GR+++ LG+PID G ++ E + PA + +TGI+VID+ Sbjct: 89 ATLGRIMDVLGRPIDD-----AGPIATEERRAIHQPAPKFDELSPSVDLLETGIKVIDLV 143 Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 P G ++G+F G+G+GK+ L++ A+ V VGER RE +F + Sbjct: 144 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKE 202 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 N + K +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ Sbjct: 203 SNVIDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILFFVDNIYRYTLAGTEVS 262 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ +L ERI + + G++T++ +V V D+ DP + Sbjct: 263 ALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSVTSIQAVYVPADDLTDPSPATTFL 320 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + R++E RDI Sbjct: 321 HLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVARDVQMTLQRYKELRDI 380 Query: 390 RLIGG 394 I G Sbjct: 381 IAILG 385 >gi|113910750|gb|ABI48107.1| ATPase beta subunit [Riella helicophylla] Length = 456 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D+S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 184 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 243 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 361 KELQDIIAILG 371 >gi|323345611|ref|ZP_08085834.1| ATP synthase F1 sector beta subunit [Prevotella oralis ATCC 33269] gi|323093725|gb|EFZ36303.1| ATP synthase F1 sector beta subunit [Prevotella oralis ATCC 33269] Length = 508 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 99/330 (30%), Positives = 155/330 (46%), Gaps = 41/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +GKPIDG +L + S I P ++ TGI+VID+ P G Sbjct: 95 GRMMNVIGKPIDGMSALNM-EGSYPIHRAAPKFDELSTHKEMLATGIKVIDLLEPYMKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212 +IG+F G+G+GK+ L+ + + + VGER RE + + D L GD Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLLRDMLESGVIRYGD 213 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250 +K++ +V +E P R L+ +T+AE F G Sbjct: 214 KFRKAMEEGKWDLSLVDPEEVQKSQATLVYGQMNEPPGARASVALSGLTVAEGFRDHGGQ 273 Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + +KG Sbjct: 274 NGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKKG 331 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD L+R +AE G YP VDPL S SR+ D Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKIAELGIYPAVDPLGSTSRILDPLI 391 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + L+ R+ E +DI I G Sbjct: 392 VGKAHYDCAQRVKQLLQRYNELQDIIAILG 421 >gi|164566135|gb|ABY61210.1| ATP synthase beta subunit [Danaea simplicifolia] Length = 394 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRRLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|115349966|ref|YP_764399.1| CF1 beta subunit of ATP synthase [Stigeoclonium helveticum] gi|122165149|sp|Q06SG7|ATPB_STIHE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|98990180|gb|ABF60147.1| CF1 beta subunit of ATP synthase [Stigeoclonium helveticum] Length = 484 Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 100/307 (32%), Positives = 155/307 (50%), Gaps = 20/307 (6%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + + + I P + F+TGI+V+D+ P Sbjct: 99 GRIFNVLGEPVD---NLGPVETEQKLPIHRSAPAFTDLDTRLAIFETGIKVVDLLAPYRR 155 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGD----- 212 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 156 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVINE 215 Query: 213 -NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 216 SNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 275 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 276 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 333 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + DE + + R++E + Sbjct: 334 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYACAQKVKETLQRYKELQ 393 Query: 388 DIRLIGG 394 DI I G Sbjct: 394 DIIAILG 400 >gi|330861087|emb|CBX71354.1| hypothetical protein YEW_KR45460 [Yersinia enterocolitica W22703] Length = 169 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 71/161 (44%), Positives = 95/161 (59%), Gaps = 1/161 (0%) Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF++LP L+ER G G+ITA +VL +GD+ DPIADS R+ILD Sbjct: 3 GEPPATKGYPPSVFAKLPALVERAGNGMSGGGSITAFYTVLTEGDDQQDPIADSARAILD 62 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GH+VL+R LAE G YP +D AS+SR + V L+ F+ RD+ +G Sbjct: 63 GHVVLSRRLAESGHYPAIDIEASISRAMTSLIDENHYSKVRQFKQLLASFQRNRDLVSVG 122 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS-EDVFQEI 433 Y G D +LDKA+ P + FL+Q + SS ED Q + Sbjct: 123 AYAAGSDPLLDKAIALYPQMEIFLQQGMFERSSYEDACQHL 163 >gi|307343666|emb|CBJ19250.1| atpD synthase beta subunit [Micromonospora siamensis] Length = 301 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 3 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 62 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL +D+I Sbjct: 63 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIDNI 122 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 123 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 180 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTH 378 + DP + + LD L RS++++G YP VDPLAS SR+ + +E V++ + Sbjct: 181 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGEEHFAVATEVKR 240 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 241 ILQKYKDLQDIIAILG 256 >gi|21684897|emb|CAD11575.1| ATP synthase beta subunit [Joinvillea gaudichaudiana] Length = 491 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 213 Query: 213 ------NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 214 GVINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 273 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 274 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 331 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + + R Sbjct: 332 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEXAQRVKQTLXR 391 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 392 YKELQDIIAILG 403 >gi|21684903|emb|CAD11578.1| ATP synthase beta subunit [Marsippospermum grandiflorum] Length = 491 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 151/306 (49%), Gaps = 20/306 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+PID +LG D S + + PA E F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGQPID---NLGPVDTSTTFPIHRSAPAFIELNTELSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + +S+ VGER RE + ++ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFAGVGERTREGNDLYKEMKESG 214 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 215 VINEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP V PL S S + E + + R+ Sbjct: 333 PATTFAHLDATTVLSRPLAAKGIYPAVSPLDSTSTMLQSNIVGKEHYETAQRVKQTSQRY 392 Query: 384 EETRDI 389 +E +D+ Sbjct: 393 KELQDV 398 >gi|8517656|emb|CAB94375.1| ATP synthase beta subunit [Polygala cruciata] Length = 481 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKES 211 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 212 GVINEKNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 329 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + + + R Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQR 389 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 390 YKELQDIIAILG 401 >gi|14591711|ref|NP_143799.1| V-type ATP synthase subunit B [Pyrococcus horikoshii OT3] gi|12585423|sp|O57729|VATB_PYRHO RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|3258418|dbj|BAA31101.1| 465aa long hypothetical H(+)-transporting ATP synthase subunit B [Pyrococcus horikoshii OT3] Length = 465 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 103/351 (29%), Positives = 175/351 (49%), Gaps = 22/351 (6%) Query: 27 SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81 S+I+ +Y + + + V G+ V + GQV+ R N+ IV + +I Sbjct: 9 STISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENMAIVQVFEGTRDLDI 68 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138 + F ++ S GR+ N +GKPIDG + + D+ ++ V A R Sbjct: 69 KTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 128 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191 ++ TGI ID L GQ++ +F+GSG+ + L + AR + F V+ Sbjct: 129 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVLGEEESF-AVV 183 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 + +G E F + + ++++V+ + +D+ I R + P A+T+AEY + D Sbjct: 184 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 243 Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 +VL+IL +T + ++REI+ E+P RGYP ++++L + ER G KG+IT Sbjct: 244 MHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRIRGRKGSITQ 303 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + + D+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 304 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 354 >gi|157826257|ref|YP_001493977.1| F0F1 ATP synthase subunit beta [Rickettsia akari str. Hartford] gi|166201729|sp|A8GPZ4|ATPB_RICAH RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157800215|gb|ABV75469.1| F0F1 ATP synthase subunit beta [Rickettsia akari str. Hartford] Length = 473 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 92/307 (29%), Positives = 155/307 (50%), Gaps = 19/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 GR++N +G+PIDG + ++S + K P Q E+ TGI+V+D+ P G Sbjct: 89 GRIMNVVGEPIDGKGDIKSSNISA--IYKSAPDFTNQSTERNILVTGIKVVDLLAPYIKG 146 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + + + VGER RE + + + + Sbjct: 147 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIDSGVIDLE 206 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIRE 268 K +V + P R L+ +TIAE F + G +VL +D+I RF + E Sbjct: 207 KPENSKVALVYGQMNAPPGARARVALSGLTIAESFRDMNGGQDVLFFVDNIFRFTQAGSE 266 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP + Sbjct: 267 VSALLGRIPSAVGYQPTLATDMGELQERI--TSTKHGSITSVQAIYVPADDLTDPAPATS 324 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD VL+R +AE G YP VDPL S S++ D +E V+ + ++ ++ + Sbjct: 325 FAHLDATTVLSRQIAEFGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQVLQTYKSLQ 384 Query: 388 DIRLIGG 394 DI I G Sbjct: 385 DIIAILG 391 >gi|307343698|emb|CBJ19266.1| atpD synthase beta subunit [Micromonospora sp. GUI37] Length = 298 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|183206572|gb|ACC54484.1| ATP synthase beta subunit [Leptocodon gracilis] Length = 460 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 153/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+PID + G S I P + F+TGI+V+D+ P Sbjct: 80 GATLGRIFNVLGEPIDNLGPVDSGTTS-PIHRSAPAFIELDTKLSIFETGIKVVDLLAPY 138 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 139 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 198 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 N +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 199 NEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 258 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 259 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPAPA 316 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++E Sbjct: 317 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYKE 376 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 377 LQDIITILG 385 >gi|312131445|ref|YP_003998785.1| ATP synthase f1 subcomplex beta subunit [Leadbetterella byssophila DSM 17132] gi|311907991|gb|ADQ18432.1| ATP synthase F1 subcomplex beta subunit [Leadbetterella byssophila DSM 17132] Length = 501 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 101/329 (30%), Positives = 159/329 (48%), Gaps = 41/329 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+ IDG + +S I P + + TGI+VID+ P G Sbjct: 90 GRLFNVVGEAIDGLGEVKTKGIS--IHRSAPKFEDLATSTEVLFTGIKVIDLLAPYVKGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE IE + GD Sbjct: 148 KIGLFGGAGVGKTVLIQELINNIAKAYAGLSVFAGVGERTREGNDLLREMIESGIVKYGD 207 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-----S 246 K S+ + +E P R L+ +T+AEYF Sbjct: 208 EFKHSMEEGGWDLSKVDRELLKDSQATFIFGQMNEPPGARARVALSGLTVAEYFRDGDGE 267 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 KG ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI +++ G+ Sbjct: 268 GKGRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERIASTKR--GS 325 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ Sbjct: 326 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRILTAEVL 385 Query: 367 ADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 D + + +L+ R++E +DI I G Sbjct: 386 GDAHYACAQRVKNLLQRYKELQDIIAILG 414 >gi|254780615|ref|YP_003065028.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254040292|gb|ACT57088.1| F0F1 ATP synthase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 478 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 96/334 (28%), Positives = 166/334 (49%), Gaps = 25/334 (7%) Query: 81 ISLGDLVFHWG-RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 +S GD V G + + GR++N +G+P+D ++ + + + P+ Q Sbjct: 69 LSRGDCVIDTGTQITVPVGEATLGRIMNVIGEPVDDQGAIISSE--KRAIHQPSPSYTEQ 126 Query: 140 RVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISL 194 + TGI+VID+ +P G +IG+F G+G+GK+ L+ + A++ V Sbjct: 127 STDASILTTGIKVIDLISPYQKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG- 185 Query: 195 VGERGREVREFIEDYLGDNLK-------------KSVVVVATSDESPILRKMAPLTAVTI 241 VGER RE + + + + K ++ +E P R LT +T+ Sbjct: 186 VGERTREGNDLYHEMIDSKVNIDPRKNNGSAVGSKCSLLYGQMNEPPGARSRVALTGLTV 245 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AE+F +G +VL +D+I RF + EI+ G +P A GY +++ E+ L ERI + Sbjct: 246 AEHFRDQGQDVLFFVDNIFRFTQANSEISALLGRIPSAVGYQSTLALEMGELQERI--TT 303 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 KG+IT+V ++ V D+ DP + + LD VL+R ++E+G YP +DPL S S + Sbjct: 304 TLKGSITSVQAIYVPADDLTDPAPATSFTHLDATTVLSRQISEKGIYPAIDPLDSNSSML 363 Query: 362 DKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 + E V+ + ++ R++ +DI I G Sbjct: 364 EIDIVGQEHYDVARRVQEILQRYKSLQDIIAILG 397 >gi|113910880|gb|ABI48172.1| ATPase beta subunit [Ptychomitrium incurvum] Length = 472 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 85 LGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 201 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 202 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 261 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 262 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 319 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 320 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 378 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 379 LQDIIAILG 387 >gi|119719258|ref|YP_919753.1| V-type ATP synthase subunit B [Thermofilum pendens Hrk 5] gi|119524378|gb|ABL77750.1| Sodium-transporting two-sector ATPase [Thermofilum pendens Hrk 5] Length = 472 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 102/357 (28%), Positives = 178/357 (49%), Gaps = 17/357 (4%) Query: 53 GKNS-DNLGQVIRINLDIVYICPVGIGEEISLGDLV-FHWGRFRISPSACWCGRVINALG 110 GK+S + G+V+ ++ + +G E + L+ F F+I S GRV N Sbjct: 48 GKDSRERFGRVLETSIGQAVVQVLGDREGLETDTLLKFTGSTFKIRVSEDVIGRVFNGRF 107 Query: 111 KPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGS 170 +PIDG + G+L EI + ++R+ +TG+ ID + GQ++ +F+ S Sbjct: 108 EPIDGLPPILSGELR-EITGEPINPISREYPHDFIQTGVSAIDGLFSMVRGQKLPIFSVS 166 Query: 171 GIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLGDN-LKKSVVVVAT 223 G+ + L + AR V+ + +G R E F+E + +++ V V+ Sbjct: 167 GLPHNLLAAQVARQATVRGEGEQFAVVFAGIGLRKTEAEFFLEQFRETGAIERLVAVLNM 226 Query: 224 SDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGY 282 +D+ + R M P A+T+AEY + D +VL+I+ +T + ++RE+++ GE+P GY Sbjct: 227 ADDPAVERLMTPRIALTVAEYLAFDLDMHVLVIMSDMTNYCEALREVSSARGEIPGRLGY 286 Query: 283 PTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSL 342 P ++S+L + ER G + +KG+IT + + G + PI D I +G I L++ + Sbjct: 287 PGYMYSDLATIYERAGVIKGKKGSITLFPILTMPGGDLRHPIPDLTGYITEGQIFLSQEM 346 Query: 343 AEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDI-RLIG 393 +G YPP++ L S+SRL D + L L R + RD+ R+IG Sbjct: 347 YAQGIYPPINILPSLSRLMKSGIGPGKTREDHRYLADQLYDAYSRGVKARDLARIIG 403 >gi|223931068|ref|YP_002586929.1| ATP synthase CF1 beta subunit [Syntrichia ruralis] gi|219562282|gb|ACL27613.1| ATP synthase CF1 beta subunit [Syntrichia ruralis] Length = 492 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 219 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 220 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|113910870|gb|ABI48167.1| ATPase beta subunit [Bryum argenteum] Length = 449 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 184 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 243 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 361 KELQDIIAILG 371 >gi|111283724|gb|ABH09212.1| ATPase beta subunit [Trichotemnoma corrugatum] Length = 452 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 63 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 119 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 120 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 179 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 180 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 239 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 240 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 297 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 298 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 356 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 357 KELQDIIAILG 367 >gi|332880270|ref|ZP_08447948.1| ATP synthase F1, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332681715|gb|EGJ54634.1| ATP synthase F1, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 507 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 102/330 (30%), Positives = 165/330 (50%), Gaps = 44/330 (13%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GRV+N +G+ IDG +L + + I P + ++ TGI+VID+ P Sbjct: 91 AQIRGRVMNVVGEAIDGMQALNETG-AFPIHRDPPKFEDLSTTQEVLFTGIKVIDLLEPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 150 LKGGKIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESG 207 Query: 210 L---GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF 245 + GD KS+ +V +E P R L+ +T+AE F Sbjct: 208 VIKYGDEFLKSMETGHWDLSKVDMDEVEKSQVAMVFGQMNEPPGARSSVALSGLTLAESF 267 Query: 246 --SSKGD---NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 ++KGD ++L +D+I RF + E++ G +P A GY ++ SE+ ++ ERI + Sbjct: 268 RDNNKGDGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGQMQERI--T 325 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ Sbjct: 326 STKNGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRI 385 Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 D E + + ++ R +E +DI Sbjct: 386 LDPLIVGQEHYETAQRVKQILQRNKELQDI 415 >gi|309322239|ref|YP_003934317.1| ATP synthase CF1 beta subunit [Monsonia speciosa] gi|197132380|gb|ACH47708.1| ATP synthase CF1 beta subunit [Monsonia speciosa] gi|300069332|gb|ADJ66452.1| ATP synthase CF1 beta subunit [Monsonia speciosa] Length = 498 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + ++ K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINDQKLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE ++ + + R Sbjct: 338 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGDEHYEIAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|119350465|gb|ABL63183.1| AtpB [Carteria sp. UTEX2] Length = 379 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + I P ++ F+TGI+V+D+ P Sbjct: 34 LGRIFNVLGEPVD---NLGPVNAEEKLPIHRLAPAFVDLDTRLSIFETGIKVVDLLAPYR 90 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREF----------I 206 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 91 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYTEMKESGVIV 150 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E L D+ K +V E P+ L+A+T+AEYF +VL +D+I RF + Sbjct: 151 EKNLTDS--KVALVYGQMXEPPVAXMRVALSALTMAEYFRDVNKQDVLFFIDNIFRFVQA 208 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 209 GAEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 266 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS--SLTHLIHRF 383 + LD VL+R+LA +G YP VDPL S S + + W EK S ++ + R+ Sbjct: 267 AVTFAHLDATTVLSRNLAAKGIYPAVDPLESTSTML-QPWIVGEKHYGSAQAVKKTLQRY 325 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 326 KELQDIIAILG 336 >gi|118917428|dbj|BAF40530.1| ATP synthase beta subunit [Ionidium commune] Length = 489 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 212 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 213 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGDEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIITILG 401 >gi|113910842|gb|ABI48153.1| ATPase beta subunit [Buxbaumia aphylla] Length = 465 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D+S P PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDVSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|304315093|ref|YP_003850240.1| A1AO ATPase, subunit B [Methanothermobacter marburgensis str. Marburg] gi|12585396|sp|O27035|VATB_METTH RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|302588552|gb|ADL58927.1| A1AO ATPase, subunit B [Methanothermobacter marburgensis str. Marburg] Length = 463 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 17/310 (5%) Query: 94 RISPSACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 +I S GR+ + GKPIDG + + + +L + P A R+ + +TGI I Sbjct: 83 KIGVSLDMMGRIFDGTGKPIDGGPEIIPEKELDINGSPMNPAA--REFPAEFIQTGISTI 140 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFI 206 D L GQ++ +F+GSG+ + L + AR + VI + +G E F+ Sbjct: 141 DGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLAEESEFAVIFAAMGITHEEANYFM 200 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 D+ L++ V + +D+ I R + P A+T AEYF+ + D +VL+IL +T + Sbjct: 201 RDFERTGALERVTVFMNLADDPAIERIITPRMALTTAEYFAFEHDMHVLVILTDLTNYCE 260 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI+ E+P RGYP ++++L L ER G ++G+IT + +++ D+ PI Sbjct: 261 ALREISAAREEVPGRRGYPGYMYTDLASLYERAGRIVGKEGSITQMPILVMPQDDITHPI 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLI 380 D I +G IVL+R L +G YPPVD L S+SRL + + ++ VS L Sbjct: 321 PDLTGYITEGQIVLSRDLHRKGIYPPVDVLPSLSRLMSGGIGEGRTREDHSGVSD--QLY 378 Query: 381 HRFEETRDIR 390 + E RD+R Sbjct: 379 SAYAEGRDLR 388 >gi|113910802|gb|ABI48133.1| ATPase beta subunit [Tylimanthus saccatus] Length = 456 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 164/312 (52%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 182 Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + D N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 183 VIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 242 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 300 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R Sbjct: 301 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQR 359 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 360 YKELQDIIAILG 371 >gi|113910860|gb|ABI48162.1| ATPase beta subunit [Rhabdoweisia fugax] Length = 456 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 184 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 243 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 361 KELQDIIAILG 371 >gi|75330429|sp|Q8MBG5|ATPB_CUSPE RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21633447|gb|AAM52198.1| ATP synthase beta subunit [Cuscuta pentagona] Length = 487 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/306 (32%), Positives = 153/306 (50%), Gaps = 16/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + LS I PP + F+TGI+V+D+ P G Sbjct: 104 LGRIFNVLGEPVDQLGPVETNQLS-PIHRSAPPFLKLDTRLSIFETGIKVVDLLAPYRRG 162 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGDNL 214 ++G+F G+G+GK+ L+ + + VGER RE E E + + Sbjct: 163 GKVGLFGGAGVGKTVLIMELINNIAKAYGGVSVFGGVGERTREGNDLYMEMKESGVINQQ 222 Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 223 KLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNRQDVLLFIDNIFRFVQAGSEV 282 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 340 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEETRD 388 + LD VL+RSLA +G YP VDPL S S L + K + + R++E +D Sbjct: 341 AHLDATTVLSRSLAAKGIYPAVDPLDSTSMMLQPQIVGKQHYKTAQRVKQTLQRYKELQD 400 Query: 389 IRLIGG 394 I I G Sbjct: 401 IIAILG 406 >gi|15678972|ref|NP_276089.1| V-type ATP synthase subunit B [Methanothermobacter thermautotrophicus str. Delta H] gi|2622051|gb|AAB85450.1| ATP synthase, subunit B [Methanothermobacter thermautotrophicus str. Delta H] Length = 465 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 17/310 (5%) Query: 94 RISPSACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 +I S GR+ + GKPIDG + + + +L + P A R+ + +TGI I Sbjct: 85 KIGVSLDMMGRIFDGTGKPIDGGPEIIPEKELDINGSPMNPAA--REFPAEFIQTGISTI 142 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFI 206 D L GQ++ +F+GSG+ + L + AR + VI + +G E F+ Sbjct: 143 DGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVLAEESEFAVIFAAMGITHEEANYFM 202 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 D+ L++ V + +D+ I R + P A+T AEYF+ + D +VL+IL +T + Sbjct: 203 RDFERTGALERVTVFMNLADDPAIERIITPRMALTTAEYFAFEHDMHVLVILTDLTNYCE 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++REI+ E+P RGYP ++++L L ER G ++G+IT + +++ D+ PI Sbjct: 263 ALREISAAREEVPGRRGYPGYMYTDLASLYERAGRIVGKEGSITQMPILVMPQDDITHPI 322 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLI 380 D I +G IVL+R L +G YPPVD L S+SRL + + ++ VS L Sbjct: 323 PDLTGYITEGQIVLSRDLHRKGIYPPVDVLPSLSRLMSGGIGEGRTREDHSGVSD--QLY 380 Query: 381 HRFEETRDIR 390 + E RD+R Sbjct: 381 SAYAEGRDLR 390 >gi|307343648|emb|CBJ19241.1| atpD synthase beta subunit [Micromonospora olivasterospora] Length = 298 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|61196960|gb|AAX39465.1| ATP synthase beta subunit [Chara australis] Length = 402 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTTITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|89574003|gb|ABD77227.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Monodelphis domestica] Length = 320 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 4 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 62 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 63 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 122 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 123 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 180 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D +E V+ Sbjct: 181 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVA 240 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 241 RGVQKILQDYKSLQDIIAILG 261 >gi|56236578|gb|AAV84656.1| ATP synthase beta subunit [Saxegothaea conspicua] Length = 424 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D LG + S + + PA + + F+TGI+V+D+ Sbjct: 34 GATLGRIFNVLGEPVD---DLGPVNASTRSPIHRSAPAFTQLDTKFSIFETGIKVVDLLA 90 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + V + S VGER RE + + Sbjct: 91 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESG 150 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 151 VIKEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + +E + + + R+ Sbjct: 269 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|71277372|gb|AAZ29866.1| ATP synthase beta subunit [Chara vulgaris] gi|71277374|gb|AAZ29867.1| ATP synthase beta subunit [Chara vulgaris] Length = 348 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S+ + + PA + + F+TGI+V+D+ P Sbjct: 28 LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 84 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 85 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 145 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKHDVLLFIDNIFRFVQAGS 204 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 322 LQDIIAILG 330 >gi|194476695|ref|YP_002048874.1| ATP synthase subunit B [Paulinella chromatophora] gi|171191702|gb|ACB42664.1| ATP synthase subunit B [Paulinella chromatophora] Length = 488 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 157/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + I P Q K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVNT-TTTAPIHRAAPKLTELQTKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +L KS V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 SKDLSKSKVALCYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ +L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + DE + ++ + R++E Sbjct: 334 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGDEHYRTARAVQANLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|89574039|gb|ABD77245.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Canis lupus familiaris] Length = 321 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 10 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 68 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 69 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 128 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 129 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 186 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D +E V+ Sbjct: 187 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVA 246 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 247 RGVQKILQDYKSLQDIIAILG 267 >gi|7706844|emb|CAB90038.1| ATP synthase beta subunit [Actinidia chinensis] Length = 489 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 96/310 (30%), Positives = 156/310 (50%), Gaps = 18/310 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G ++ I P + + F+TGI+V+D+ P Sbjct: 95 GATLGRIFNVLGEPVDNLGPVDTG-ITSPIHRSAPAFVQLETKLSIFETGIKVVDLLAPY 153 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 154 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGV 212 Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 213 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 272 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 330 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S L + S + + + + R++ Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSNEHYETAQRVKQTLQRYK 390 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 391 ELQDIITILG 400 >gi|20467371|gb|AAL27816.1| ATPase beta subunit [Ephedra sp. CR33] Length = 446 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 159/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 77 LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 133 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 134 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 193 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 194 EKNITESKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 253 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 254 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 311 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S L + ++ + + R++E Sbjct: 312 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 371 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 372 QDIIAILG 379 >gi|5758870|gb|AAD50844.1| ATP synthase beta subunit [Cyanastrum cordifolium] Length = 496 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|34501408|ref|NP_904195.1| ATP synthase CF1 beta subunit [Physcomitrella patens subsp. patens] gi|38258930|sp|P80658|ATPB_PHYPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|34494778|dbj|BAC85045.1| ATP synthase beta subunit [Physcomitrella patens subsp. patens] Length = 494 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 102/326 (31%), Positives = 165/326 (50%), Gaps = 22/326 (6%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEK 143 D+V + GR+ N LG+P+D +LG D S + + PA + + Sbjct: 90 DVVDTGAALSVPVGEATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKL 146 Query: 144 G-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 F+TGI+V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G Sbjct: 147 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 206 Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGD 250 RE + Y+ +N+ +S V V +E P R LTA+T+AEYF Sbjct: 207 REGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQ 266 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ Sbjct: 267 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 324 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +V V D+ DP + + LD VL+R LA +G YP VDPL S S + + W E+ Sbjct: 325 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 383 Query: 371 --KLVSSLTHLIHRFEETRDIRLIGG 394 + + + R++E +DI I G Sbjct: 384 HYETAQGVKETLQRYKELQDIIAILG 409 >gi|307343752|emb|CBJ19293.1| atpD synthase beta subunit [Micromonospora sp. SR4] Length = 305 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 86/259 (33%), Positives = 143/259 (55%), Gaps = 8/259 (3%) Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGER 198 ++ +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER Sbjct: 7 DRELETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGER 66 Query: 199 GREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256 RE + I + + K+ +V DE P R L+A+T+AEYF + VLL + Sbjct: 67 TREGNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFI 126 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V Sbjct: 127 DNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVP 184 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSS 375 D++ DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + Sbjct: 185 ADDYTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATE 244 Query: 376 LTHLIHRFEETRDIRLIGG 394 + ++ ++++ +DI I G Sbjct: 245 VKRILQKYKDLQDIIAILG 263 >gi|260911875|ref|ZP_05918441.1| ATP synthase F1 [Prevotella sp. oral taxon 472 str. F0295] gi|260633991|gb|EEX52115.1| ATP synthase F1 [Prevotella sp. oral taxon 472 str. F0295] Length = 509 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 49/334 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N +GKPIDG +L+ME I + P ++ TGI+VID+ P Sbjct: 95 GRMMNVIGKPIDG-----MSELNMEGAYPIHREAPKFEELSTHKEMLATGIKVIDLLEPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ L+ + + + VGER RE + I D + Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMIESGVI 209 Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247 GD +K++ +V +E P R L+ +T+AE F Sbjct: 210 RYGDKFRKAMEEGKWDLSLVDPEELRQSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269 Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 G +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + Sbjct: 270 HGGKDGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TS 327 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 ++G+IT+V +V V D+ DP + + LD L+R + E G YP VDPL S SR+ Sbjct: 328 TKRGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRIL 387 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D E + + ++ R++E +DI I G Sbjct: 388 DPLIVGKEHYECAQRVKQILQRYKELQDIIAILG 421 >gi|115531922|ref|YP_784078.1| ATP synthase CF1 beta subunit [Pelargonium x hortorum] gi|122164272|sp|Q06FV3|ATPB_PELHO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|112382076|gb|ABI17269.1| ATP synthase CF1 beta subunit [Pelargonium x hortorum] Length = 498 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 103/313 (32%), Positives = 162/313 (51%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PPA + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDNRTTSPIHKSPPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +K+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 218 Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 S V+ VA S +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 219 SGVINEQKVAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 278 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ D Sbjct: 279 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTD 336 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 337 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGNEHYEIAQRVKQTLQ 396 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 397 RYKELQDIIAILG 409 >gi|44885332|dbj|BAD11909.1| ATP synthase beta subunit [Nitella acuminata] Length = 340 Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S+ + + PA + + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|145588215|ref|YP_001154812.1| F0F1 ATP synthase subunit beta [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|189081337|sp|A4SUT4|ATPB_POLSQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|145046621|gb|ABP33248.1| ATP synthase F1 subcomplex beta subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 466 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 154/305 (50%), Gaps = 18/305 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKV-PPAMNRQRVEKG---FKTGIRVIDIF 155 GR+++ LG+PID G ++ E + PA + +TGI+VID+ Sbjct: 89 ATLGRIMDVLGRPIDD-----AGPIATEERRAIHQPAPKFDELSPSVDLLETGIKVIDLV 143 Query: 156 TPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG 211 P G ++G+F G+G+GK+ L++ A+ V VGER RE +F + Sbjct: 144 CPFAKGGKVGLFGGAGVGKTVNMMELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMKE 202 Query: 212 DN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIA 270 N + K +V +E P R LT +T+AE F +G ++L +D+I R+ + E++ Sbjct: 203 SNVIDKVAMVFGQMNEPPGNRLRVALTGLTMAEAFRDEGRDILFFVDNIYRYTLAGTEVS 262 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ E+ +L ERI + + G++T++ +V V D+ DP + Sbjct: 263 ALLGRMPSAVGYQPTLAEEMGKLQERI--TSTKTGSVTSIQAVYVPADDLTDPSPATTFL 320 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHL-IHRFEETRDI 389 LD +VL+R +A G YP VDPL S SR D E V+ + + R++E RDI Sbjct: 321 HLDSTVVLSRDIAALGIYPAVDPLDSTSRQLDPQVVGQEHYEVARDVQMTLQRYKELRDI 380 Query: 390 RLIGG 394 I G Sbjct: 381 IAILG 385 >gi|113910850|gb|ABI48157.1| ATPase beta subunit [Tetraphis pellucida] Length = 465 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D+S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|75338126|sp|Q9TJR9|ATPB_PROWI RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|5748664|emb|CAB53102.1| ATP synthase CF1 beta chain [Prototheca wickerhamii] Length = 481 Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 25/329 (7%) Query: 84 GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQR 140 G VF G ++ GR+ N LG+ ID +LG D S + I P ++ Sbjct: 78 GMTVFDTGDVLKVPVGRSTLGRIFNVLGETID---NLGPADTSNQLPIHRSAPKFIDLDT 134 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVG 196 F+TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V + Sbjct: 135 KLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKTHGGVSVFGGVG- 193 Query: 197 ERGREVREFIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS- 247 ER RE + + + K +V +E P R LTA+T+AEYF Sbjct: 194 ERTREGNDLYMEMKESGIINEALISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDV 253 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +VLL +D+I RF + E++ G LP A GY ++ SE+ L ERI + + G+I Sbjct: 254 SSQDVLLFIDNIFRFLQAGSEVSALLGRLPSAVGYQPTLASEMGALQERI--TSTKDGSI 311 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 T++ +V + D+ DP + + LD VL+R LA +G YP VDPL S S + + W Sbjct: 312 TSIQAVYIPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLESTSTML-QPWIV 370 Query: 368 DEK--KLVSSLTHLIHRFEETRDIRLIGG 394 E+ K ++ + R++E +DI I G Sbjct: 371 GEEHYKCSQNVKQTLQRYKELQDIIAILG 399 >gi|289450764|ref|YP_003475681.1| ATP synthase ab C-terminal domain-containing protein [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185311|gb|ADC91736.1| ATP synthase ab C-terminal domain protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 463 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 93/305 (30%), Positives = 156/305 (51%), Gaps = 14/305 (4%) Query: 98 SACWCGRVINALGKPIDGDDSL-GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + +G P DG L + + + + P A R ++ +TG+ ID Sbjct: 82 SEDMLGRVFDGMGHPADGGPELIPEARMDVNGLPLNPTA--RDYPDEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DK-----VIISLVGERGREVREFIEDY 209 L GQ++ +F+ SG+ S L + AR DK V+ + +G E FI+D+ Sbjct: 140 TLVRGQKLPIFSASGLPHSQLGAQIARQAKVIGDKEQKFAVVFAAMGITFEEADYFIKDF 199 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 + ++V+ + +D+ I R P A+T AEY + K D +VL+I+ IT +A ++R Sbjct: 200 QRTGAIDRTVLFINLADQPAIERIATPRMALTCAEYLAFKKDMHVLVIMTDITYYAEALR 259 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ E+P RGYP ++++L + ER G + +KG+IT V + + ++ PI D Sbjct: 260 EVSAARKEVPGRRGYPGYLYTDLATMYERAGRVKGKKGSITMVPILTMPDEDKTHPIPDL 319 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEE 385 I +G I+L+R L ++G PPVD L S+SRL DK + + ++ L + Sbjct: 320 TGYITEGQIILSRELYKKGLRPPVDVLPSLSRLKDKGIGEGKTREDHAGTMNQLFAAYSR 379 Query: 386 TRDIR 390 +D R Sbjct: 380 GKDAR 384 >gi|150035729|gb|ABR67210.1| ATP synthase beta subunit [Pharus lappulaceus] Length = 484 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 91 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 147 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 207 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 208 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 267 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 325 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 326 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 385 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 386 KELQDIIAILG 396 >gi|14718009|gb|AAK72746.1| ATP synthase beta subunit [Cleome hassleriana] Length = 498 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + E ++ G V G + GR Sbjct: 50 KGRDTVGQEINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDMGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|19745324|ref|NP_606460.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS8232] gi|73920438|sp|Q8P2U5|VATB_STRP8 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|19747425|gb|AAL96959.1| putative V-type Na+ -ATPase subunit B [Streptococcus pyogenes MGAS8232] Length = 471 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 13/334 (3%) Query: 41 QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98 Y L D +H G GQV+ + D +V + G ++ + F ++ S Sbjct: 27 HYNELVDITLHNGARRK--GQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVS 84 Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ + +G+PIDG L + ++I + + R ++ +TGI ID L Sbjct: 85 EDMVGRIFDGMGQPIDGGPELIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212 GQ++ VF+GSG+ + L + AR SD V+ + +G E F+ D Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDDNFAVVFAAMGITFEEAEFFMNDLRET 203 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270 + +SV+ + +++ I R P A+T AEY + KG +VL+I+ +T + ++RE++ Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKGMHVLVIMTDMTNYCEALREVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P RGYP +++ L L ER G +KG++T + + + D+ PI D Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLIGKKGSVTQIPILTMPEDDITHPIPDLTGY 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L++ L + G PP++ L S+SRL DK Sbjct: 324 ITEGQIILSQELYKNGFRPPINVLPSLSRLKDKG 357 >gi|307343694|emb|CBJ19264.1| atpD synthase beta subunit [Micromonospora sp. GUI28] Length = 302 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|307343650|emb|CBJ19242.1| atpD synthase beta subunit [Micromonospora pallida] Length = 302 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|297612839|ref|NP_001066388.2| Os12g0207500 [Oryza sativa Japonica Group] gi|255670138|dbj|BAF29407.2| Os12g0207500 [Oryza sativa Japonica Group] Length = 336 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 16 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHISAPAFIELDTKLSIFQTGIKVVDLLA 72 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 73 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 132 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 133 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 192 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E+++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 193 AGSEVSSLLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVHADDLTDPA 250 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 251 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 310 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 311 KELQDIIAILG 321 >gi|6687550|emb|CAB65004.1| ATP synthase beta subunit [Eremosyne pectinata] Length = 498 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 223 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + A +E ++ + + R++E Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPAIVGEEHYEIAQRVKQTLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|118411012|ref|YP_874407.1| ATP synthase CF1 beta chain [Phaeodactylum tricornutum] gi|125987719|sp|A0T0D2|ATPB_PHATC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116739759|gb|ABK20630.1| ATP synthase CF1 beta chain [Phaeodactylum tricornutum] Length = 475 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/307 (30%), Positives = 155/307 (50%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+P+D + K D ++ I P + F+TGI+V+D+ P G Sbjct: 91 LGRIFNVIGEPVDEQGEV-KYDETLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYRRG 149 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + E+ + Sbjct: 150 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVINE 208 Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 209 KNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAGSE 268 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP + Sbjct: 269 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPATT 326 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + +E + ++ + R++E + Sbjct: 327 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQVGIVTEEHYATAENVKETLQRYKELQ 386 Query: 388 DIRLIGG 394 DI I G Sbjct: 387 DIIAILG 393 >gi|291568724|dbj|BAI90996.1| ATP synthase beta chain [Arthrospira platensis NIES-39] Length = 485 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 166/310 (53%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N +G+PID +LG D + I P ++ + F+TGI+V+D+ P Sbjct: 97 LGRIFNVVGEPID---NLGPVPNDETSSIHRPAPAFVDLETSPSVFETGIKVVDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L++ A++ V + ER RE E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYNEMIESGVI 212 Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHS 265 ++L +S V V +E P R L+A+T+AEYF SK D VLL +D+I RF + Sbjct: 213 NKEDLPQSKVALVYGQMNEPPGARMRVALSALTMAEYFRDVSKQD-VLLFIDNIFRFVQA 271 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 GSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTKEGSITSIQAVYVPADDLTDPAP 329 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R+LA +G YP VDPL S S + + +E + ++ + R++ Sbjct: 330 ATTFAHLDATTVLSRALASKGIYPAVDPLDSSSTMLQPSVVGEEHYQTARAVQSTLQRYK 389 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 390 ELQDIIAILG 399 >gi|297527269|ref|YP_003669293.1| H(+)-transporting two-sector ATPase [Staphylothermus hellenicus DSM 12710] gi|297256185|gb|ADI32394.1| H(+)-transporting two-sector ATPase [Staphylothermus hellenicus DSM 12710] Length = 469 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/336 (29%), Positives = 169/336 (50%), Gaps = 26/336 (7%) Query: 43 VCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA 99 V G+ V V G LGQVI ++ D I G +I L + + ++ Sbjct: 30 VSYGEVVEVVLGSGEAKLGQVIDVSKDATIIQVFGGVSDIDLKVSKVRYRGETLKLPVGI 89 Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 GR+ + LG+PIDG +D L + S++PP+ + +TGI ID Sbjct: 90 DMLGRIFDGLGRPIDGGPPIVPEDYLDINGSPINPASRLPPS-------EFIETGISAID 142 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206 + GQ++ +F+GSG+ + + + R + F V+ + +G + FI Sbjct: 143 GLNSIVRGQKLPIFSGSGLPHNRIAAQIVRQARVRGKEEKF-AVVFAAIGVSYDDAMFFI 201 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMA-PLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 E++ ++ V + +SP++ ++A P A+T AE+ + K D +VL+IL +T + Sbjct: 202 ENFKNYGALENAVAFINTADSPVIERIAIPRVALTAAEFLAWKHDMHVLVILTDMTNYCE 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++RE++ E+P RGYP ++++L + ER G E +KG+IT + + + D+ PI Sbjct: 262 ALRELSAAREEVPSRRGYPGYMYTDLATIYERAGRVEGKKGSITQMPILTMPNDDITHPI 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 D I +G +VL+R L +G YPP D L S+SRL Sbjct: 322 PDLTGYITEGQLVLSRQLWLKGIYPPFDILMSLSRL 357 >gi|57868958|gb|AAW57475.1| ATP synthase beta subunit [Galax urceolata] Length = 475 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 216 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 217 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 276 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 277 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 334 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 335 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEEHYQTAQRVKQTLQ 393 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 394 RYKELQDIIAILG 406 >gi|307343756|emb|CBJ19295.1| atpD synthase beta subunit [Micromonospora sp. SR15] Length = 320 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 141/256 (55%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF + VLL +D+I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVQKQEVLLFIDNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSLQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + A+ + + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGAEHFAVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ ++++ +DI I G Sbjct: 239 ILQKYKDLQDIIAILG 254 >gi|77165547|ref|YP_344072.1| V-type ATP synthase subunit B [Nitrosococcus oceani ATCC 19707] gi|254434189|ref|ZP_05047697.1| ATP synthase alpha/beta family, nucleotide-binding domain protein [Nitrosococcus oceani AFC27] gi|123730639|sp|Q3J9F4|VATB_NITOC RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|76883861|gb|ABA58542.1| Sodium-transporting two-sector ATPase [Nitrosococcus oceani ATCC 19707] gi|207090522|gb|EDZ67793.1| ATP synthase alpha/beta family, nucleotide-binding domain protein [Nitrosococcus oceani AFC27] Length = 479 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 106/362 (29%), Positives = 176/362 (48%), Gaps = 24/362 (6%) Query: 51 HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-----SACWCGRV 105 H+G+ + GQVI + ++V V + E DL W RF P S GR+ Sbjct: 36 HRGRRRN--GQVIFTSGEVVL---VQVFEGTDDLDLERTWVRFLEEPFEIPLSPDVLGRI 90 Query: 106 INALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIG 165 + +G P D D L + + R ++ +TGI ID L GQ++ Sbjct: 91 FDGVGAPRD-DRPPMIAPLKRNVNGAPVNPVARAYPQEFIQTGIAAIDGLNSLVRGQKLP 149 Query: 166 VFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSV 218 +F+GSG+ + L + R + ++ + +G + R F E++ L K V Sbjct: 150 IFSGSGLPHNRLAAQIVRQAKLLGEETRFVMVFAAMGVTYSDARFFQEEFENSGVLGKVV 209 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277 + + +D+ PI R + P TA+ AEY + + D +VL+++ +T +A ++RE+AT G++P Sbjct: 210 MYLNLADDPPIKRLLLPRTALACAEYLAFEQDLHVLVVMTDMTHYAEALREVATAKGDVP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP ++S+L + ER G + +G+IT V V + D+ PI D I +G IV Sbjct: 270 SRKGYPGYLYSDLAEIYERAGRIKNRRGSITMVPVVSMPSDDITHPIPDLTGYITEGQIV 329 Query: 338 LNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 L+R L +G YPPV+ S+SRL + D ++ S L + E R++ I Sbjct: 330 LSRELHHQGIYPPVNIPPSLSRLMKDGIGKNSTREDHPRVASQLYAAYAKALEVRNLASI 389 Query: 393 GG 394 G Sbjct: 390 IG 391 >gi|62085223|gb|AAX63014.1| ATP synthase beta subunit [Euonymus alatus] Length = 470 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + ++ K PA + + F+TGI+V+D+ P Sbjct: 89 ATLGRIFNVLGEPVD---NLGPVDTRTTSLIHKSAPAFIQLETKLSIFETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 205 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 206 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 265 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 266 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 323 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 324 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 383 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 384 ELQDIIAILG 393 >gi|183206512|gb|ACC54454.1| ATP synthase beta subunit [Cyananthus lobatus] Length = 488 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 211 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKKGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +DE + ++ + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQNVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIITILG 399 >gi|284053202|ref|ZP_06383412.1| F0F1 ATP synthase subunit beta [Arthrospira platensis str. Paraca] Length = 485 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 166/310 (53%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N +G+PID +LG D + I P ++ + F+TGI+V+D+ P Sbjct: 97 LGRIFNVVGEPID---NLGPVPNDETSSIHRPAPAFVDLETSPSVFETGIKVVDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L++ A++ V + ER RE E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYNEMIESGVI 212 Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHS 265 ++L +S V V +E P R L+A+T+AEYF SK D VLL +D+I RF + Sbjct: 213 NKEDLPQSKVALVYGQMNEPPGARMRVALSALTMAEYFRDVSKQD-VLLFIDNIFRFVQA 271 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 GSEVSALLGRMPSAVGYQPTLGTEMGELQERI--TSTKEGSITSIQAVYVPADDLTDPAP 329 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R+LA +G YP VDPL S S + + +E + ++ + R++ Sbjct: 330 ATTFAHLDATTVLSRALASKGIYPAVDPLDSSSTMLQPSVVGEEHYQTARAVQSTLQRYK 389 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 390 ELQDIIAILG 399 >gi|124487966|gb|ABN12066.1| putative ATP synthase beta subunit [Maconellicoccus hirsutus] Length = 362 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 139/261 (53%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 19 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 77 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 78 NDLYNEMIESGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 137 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 138 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIY 195 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLV 373 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D A+ Sbjct: 196 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNTA 255 Query: 374 SSLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 256 RGVQKILQDYKSLQDIIAILG 276 >gi|75336517|sp|Q9MS49|ATPB_BRANA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|8745523|gb|AAF78949.1|AF267641_1 ATP synthase beta subunit [Brassica napus] Length = 498 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 112/366 (30%), Positives = 179/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGD-LSMEIMSKVPPA-MNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P++ +LG D L+ + K PA ++ F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVN---NLGPVDTLTTSPIHKSAPAFIDLDTTLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGDNL 214 +IG+F G+G+GK+ L+ + A++ V + ER RE E E + + L Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEL 225 Query: 215 K----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + E+ Sbjct: 226 NLADSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSAEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +E + + + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IIAILG 409 >gi|289522918|ref|ZP_06439772.1| V-type sodium ATPase, B subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503942|gb|EFD25106.1| V-type sodium ATPase, B subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 476 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/350 (28%), Positives = 177/350 (50%), Gaps = 16/350 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+V+ I+ D +V + G ++ + F I S GR+ N G+PID Sbjct: 43 GRVLEISTDRALVQVFEGTTGIDLENTKVRFLGKVLMIPVSRGLLGRIFNGRGEPIDDGP 102 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 ++ + ++I +R + +TGI ID P+ GQ++ +F+GSG+ + + Sbjct: 103 AIIP-EKHLDINGYPINPYSRDYPSEFIQTGISTIDGMNPIVRGQKLPIFSGSGMPHNKM 161 Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 + AR S V+ + +G E F++D+ ++++V+ + +D+ I Sbjct: 162 AAQIARQATVLGSQEGFAVVFAAMGITFEEASFFMDDFRRTGAIERAVMFLNLADDPAIE 221 Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R P A+T AEY + + D +VL+IL +T + ++REI+ E+P RGYP ++++ Sbjct: 222 RITTPRLALTCAEYLAFELDMHVLVILTDMTNYCEALREISAARKEVPGRRGYPGYLYTD 281 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 L + ER G KG+IT + + + D+ PI D I +G I+L+R L +G YP Sbjct: 282 LATMYERAGRLRGYKGSITQLPILTMPEDDITHPIPDLTGYITEGQIILSRGLHRKGIYP 341 Query: 350 PVDPLASVSRLADKAWSADEKK-----LVSSLTHLIHRFEETRDIRLIGG 394 PVD L S+SRL DK D+ + L++ L R +E +++ +I G Sbjct: 342 PVDVLPSLSRLKDKGIGRDKTREDHADLLNQLFAAYARGKEAKELAVILG 391 >gi|170293977|gb|ACB13082.1| ATP synthase beta subunit [Ulva lactuca] Length = 366 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 157/307 (51%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+DG + + S+ I P ++ F+TGI+V+D+ P G Sbjct: 21 LGRIFNVLGEPVDGLEDAAHEN-SLPIHRSAPAFVDLDTQLSIFETGIKVVDLLAPYRRG 79 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GD 212 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ + Sbjct: 80 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINSN 139 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 N +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 140 NFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 199 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 200 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 257 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLV--SSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + R++E + Sbjct: 258 AHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYTCAQNVKETLQRYKELQ 316 Query: 388 DIRLIGG 394 DI I G Sbjct: 317 DIIAILG 323 >gi|119368038|dbj|BAF40532.1| ATP synthase beta subunit [Euonymus hamiltonianus var. sieboldianus] Length = 477 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + ++ K PA + + F+TGI+V+D+ P Sbjct: 97 ATLGRIFNVLGEPVD---NLGPVDTRTTSLIHKSAPAFIQLETKLSIFETGIKVVDLLAP 153 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 214 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 331 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 391 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 392 ELQDIIAILG 401 >gi|113910772|gb|ABI48118.1| ATPase beta subunit [Ptilidium pulcherrimum] Length = 472 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDIAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|239624937|ref|ZP_04667968.1| H/transporting two-sector ATPase alpha/beta subunit central region [Clostridiales bacterium 1_7_47_FAA] gi|239521323|gb|EEQ61189.1| H/transporting two-sector ATPase alpha/beta subunit central region [Clostridiales bacterium 1_7_47FAA] Length = 457 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/312 (30%), Positives = 160/312 (51%), Gaps = 18/312 (5%) Query: 98 SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S R+ + +GKPIDG D L + + + + P A R E+ +TG+ ID Sbjct: 82 SEDMLSRMFDGMGKPIDGGPDILPEKRMDINGLPMNPAA--RSYPEEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY 209 L GQ++ +F+ SG+ + L + AR S+ F V+ + +G E F+E + Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTSEPF-AVVFAAMGITFEEANFFMESF 198 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIR 267 + +SV+ + +++ + R P A+T AEY + K +VL+IL IT +A S+R Sbjct: 199 RETGAIDRSVMFINLANDPAVERIATPRMALTAAEYLAFEKNMHVLVILTDITNYADSLR 258 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ E+P RGYP ++++L L ER G + + G+IT + + + D+ PI D Sbjct: 259 EISAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKNGSITMIPILTMPEDDKTHPIPDL 318 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHR 382 I +G I+L+R L + PP+D L S+SRL DK AD +++ L R Sbjct: 319 TGYITEGQIILSRDLYRKNVTPPIDVLPSLSRLKDKGIGEGKTRADHADVMNQLFAAYAR 378 Query: 383 FEETRDIRLIGG 394 ++ +++ +I G Sbjct: 379 GKDAKELMVILG 390 >gi|56675678|emb|CAB63585.2| atp synthase beta subunit [Brassica balearica] Length = 499 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 108/366 (29%), Positives = 174/366 (47%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + + + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSFFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------IEDYL 210 +IG+F G+G+GK+ L+ + A++ V + ER RE + + + L Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEL 225 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + E+ Sbjct: 226 NXAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +E + + + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IIAILG 409 >gi|14717970|gb|AAK72727.1| ATP synthase beta subunit [Brassica balearica] Length = 475 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 108/366 (29%), Positives = 174/366 (47%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + + + G D+V + GR Sbjct: 28 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMDVVDMGNPLSVPVGGATLGR 87 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 88 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSFFETGIKVVDLLAPYRRGG 144 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF--------IEDYL 210 +IG+F G+G+GK+ L+ + A++ V + ER RE + + + L Sbjct: 145 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVINEL 203 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + E+ Sbjct: 204 NXAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 263 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 264 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 321 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + +E + + + R++E +D Sbjct: 322 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQD 381 Query: 389 IRLIGG 394 I I G Sbjct: 382 IIAILG 387 >gi|126700574|ref|YP_001089471.1| V-type ATP synthase subunit B [Clostridium difficile 630] gi|254976500|ref|ZP_05272972.1| V-type ATP synthase subunit B [Clostridium difficile QCD-66c26] gi|255093884|ref|ZP_05323362.1| V-type ATP synthase subunit B [Clostridium difficile CIP 107932] gi|255102066|ref|ZP_05331043.1| V-type ATP synthase subunit B [Clostridium difficile QCD-63q42] gi|255307934|ref|ZP_05352105.1| V-type ATP synthase subunit B [Clostridium difficile ATCC 43255] gi|255315637|ref|ZP_05357220.1| V-type ATP synthase subunit B [Clostridium difficile QCD-76w55] gi|255518297|ref|ZP_05385973.1| V-type ATP synthase subunit B [Clostridium difficile QCD-97b34] gi|255651415|ref|ZP_05398317.1| V-type ATP synthase subunit B [Clostridium difficile QCD-37x79] gi|255656878|ref|ZP_05402287.1| V-type ATP synthase subunit B [Clostridium difficile QCD-23m63] gi|260684474|ref|YP_003215759.1| V-type ATP synthase subunit B [Clostridium difficile CD196] gi|260688133|ref|YP_003219267.1| V-type ATP synthase subunit B [Clostridium difficile R20291] gi|296452285|ref|ZP_06893990.1| V-type ATP synthase, subunit B [Clostridium difficile NAP08] gi|296877636|ref|ZP_06901666.1| V-type ATP synthase, subunit B [Clostridium difficile NAP07] gi|306521244|ref|ZP_07407591.1| V-type ATP synthase subunit B [Clostridium difficile QCD-32g58] gi|123174108|sp|Q184E3|VATB_CLOD6 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|115252011|emb|CAJ69847.1| V-type ATP synthase beta chain (V-type ATPase subunit B) [Clostridium difficile] gi|260210637|emb|CBA65316.1| V-type sodium ATP synthase subunit B [Clostridium difficile CD196] gi|260214150|emb|CBE06368.1| V-type sodium ATP synthase subunit B [Clostridium difficile R20291] gi|296258888|gb|EFH05778.1| V-type ATP synthase, subunit B [Clostridium difficile NAP08] gi|296431397|gb|EFH17214.1| V-type ATP synthase, subunit B [Clostridium difficile NAP07] Length = 457 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 88/280 (31%), Positives = 146/280 (52%), Gaps = 11/280 (3%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVI 152 F +SP GRV + +G+PIDG + D ++I R + +TG+ I Sbjct: 79 FGVSPD--ILGRVFSGMGRPIDGGPEIIP-DKRLDINGAPINPAARDYPAEFIQTGVSAI 135 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFI 206 D L GQ++ +F+GSG+ + L AR +D V+ + VG + FI Sbjct: 136 DGLNTLVRGQKLPIFSGSGLPHANLAVQIARQAKVRGTDSKFAVVFAAVGITFEDAEFFI 195 Query: 207 EDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 D+ + +SVV V +++ + R P A+T AEY + + D +VL+I+ IT +A Sbjct: 196 SDFKATGAIDRSVVFVNLANDPAVERVSTPRMALTAAEYLAFEQDMHVLVIITDITNYAE 255 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++RE++ E+P RGYP ++++L + ER G + +G+IT + + + D+ PI Sbjct: 256 ALREVSAAKKEVPGRRGYPGYLYTDLATMYERAGKMKGHEGSITMIPILTMPEDDKTHPI 315 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 D I +G I+L+R L ++ PP+D L S+SRL DK Sbjct: 316 PDLTGYITEGQIILSRELYKKDIQPPIDVLPSLSRLKDKG 355 >gi|169261005|gb|ACA52102.1| ATP synthase beta subunit [Saccoloma inaequale] Length = 290 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 93/283 (32%), Positives = 145/283 (51%), Gaps = 20/283 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + L+ I P F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NLGPVENSLTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGAGERTREGNDLYMEMKESKVIN 123 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 124 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 + LD VL+R LA +G YP VDPL S S + + W E+ Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEE 283 >gi|71902796|ref|YP_279599.1| V-type ATP synthase subunit B [Streptococcus pyogenes MGAS6180] gi|123747806|sp|Q48VL2|VATB_STRPM RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|71801891|gb|AAX71244.1| V-type sodium ATP synthase subunit B [Streptococcus pyogenes MGAS6180] Length = 471 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 166/334 (49%), Gaps = 13/334 (3%) Query: 41 QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98 Y L D +H G+ GQV+ + D +V + G ++ + F ++ S Sbjct: 27 HYNELVDITLHNGERRK--GQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVS 84 Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ + +G PIDG L + ++I + + R ++ +TGI ID L Sbjct: 85 EDMVGRIFDGMGHPIDGGPELIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212 GQ++ VF+GSG+ + L + AR SD V+ + +G E F+ D Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDDNFAVVFAAMGITFEEAEFFMNDLRET 203 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIA 270 + +SV+ + +++ I R P A+T AEY + KG +VL+I+ +T + ++RE++ Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKGMHVLVIMTDMTNYCEALREVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P RGYP +++ L L ER G +KG++T + + + D+ PI D Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLIGKKGSVTQIPILTMPEDDITHPIPDLTGY 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L++ L + G PP++ L S+SRL DK Sbjct: 324 ITEGQIILSQELYKNGFRPPINVLPSLSRLKDKG 357 >gi|57868962|gb|AAW57477.1| ATP synthase beta subunit [Shortia uniflora] Length = 489 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 329 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEEHYQTAQRVKQTLQ 388 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 389 RYKELQDIIAILG 401 >gi|299830346|ref|YP_003734561.1| ATP synthase CF1 beta subunit [Kryptoperidinium foliaceum] gi|297385048|gb|ADI40346.1| ATP synthase CF1 beta subunit [Kryptoperidinium foliaceum] Length = 475 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 157/309 (50%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N +G+P+D GD S D ++ I P + F+TGI+V+D+ P Sbjct: 91 LGRIFNVIGEPVDEQGDVSY---DETLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYR 147 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + E+ Sbjct: 148 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVI 206 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 207 NENNFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAG 266 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 267 SEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPA 324 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEE 385 + + LD VL R LA +G YP VDPL S S + S ++ S+ + R++E Sbjct: 325 TTFAHLDATTVLARGLAAKGIYPAVDPLDSTSTMLQPGIVSETHYEVAESVKETLQRYKE 384 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 385 LQDIIAILG 393 >gi|190893716|ref|YP_001980258.1| H(+)-transporting ATP synthase, beta subunit [Rhizobium etli CIAT 652] gi|226740664|sp|B3PQ68|ATPB_RHIE6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190698995|gb|ACE93080.1| H(+)-transporting ATP synthase protein, beta subunit [Rhizobium etli CIAT 652] Length = 475 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D L I P + + + TGI+V+D+ P G Sbjct: 90 LGRIMNVIGEPVDEAGPLNTAH-KRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYARG 148 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 149 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 207 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +T+AE+F +G +VL +D+I RF + E+ Sbjct: 208 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 267 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + G+IT+V ++ V D+ DP + Sbjct: 268 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 325 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 326 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 385 Query: 389 IRLIGG 394 I I G Sbjct: 386 IIAILG 391 >gi|34420370|gb|AAQ67427.1| ATP synthase beta [Drosophila melanogaster] gi|34420372|gb|AAQ67428.1| ATP synthase beta [Drosophila melanogaster] gi|34420374|gb|AAQ67429.1| ATP synthase beta [Drosophila melanogaster] gi|34420376|gb|AAQ67430.1| ATP synthase beta [Drosophila melanogaster] gi|34420378|gb|AAQ67431.1| ATP synthase beta [Drosophila melanogaster] gi|34420380|gb|AAQ67432.1| ATP synthase beta [Drosophila melanogaster] gi|34420382|gb|AAQ67433.1| ATP synthase beta [Drosophila melanogaster] gi|34420384|gb|AAQ67434.1| ATP synthase beta [Drosophila melanogaster] gi|34420386|gb|AAQ67435.1| ATP synthase beta [Drosophila melanogaster] gi|34420388|gb|AAQ67436.1| ATP synthase beta [Drosophila melanogaster] gi|34420390|gb|AAQ67437.1| ATP synthase beta [Drosophila melanogaster] gi|34420392|gb|AAQ67438.1| ATP synthase beta [Drosophila melanogaster] gi|34420394|gb|AAQ67439.1| ATP synthase beta [Drosophila melanogaster] gi|34420396|gb|AAQ67440.1| ATP synthase beta [Drosophila melanogaster] gi|34420398|gb|AAQ67441.1| ATP synthase beta [Drosophila melanogaster] gi|34420400|gb|AAQ67442.1| ATP synthase beta [Drosophila melanogaster] gi|34420402|gb|AAQ67443.1| ATP synthase beta [Drosophila melanogaster] gi|34420404|gb|AAQ67444.1| ATP synthase beta [Drosophila melanogaster] gi|34420406|gb|AAQ67445.1| ATP synthase beta [Drosophila melanogaster] gi|34420408|gb|AAQ67446.1| ATP synthase beta [Drosophila melanogaster] gi|34420410|gb|AAQ67447.1| ATP synthase beta [Drosophila melanogaster] gi|34420412|gb|AAQ67448.1| ATP synthase beta [Drosophila melanogaster] gi|34420416|gb|AAQ67450.1| ATP synthase beta [Drosophila melanogaster] Length = 379 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 93/285 (32%), Positives = 149/285 (52%), Gaps = 16/285 (5%) Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178 D + I ++ P + ++ TGI+V+D+ P G +IG+F G+G+GK+ L+ Sbjct: 12 DKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 71 Query: 179 SMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLKKSVVVVATSDESPILR 231 + A++ V VGER RE E IE L D K +V +E P R Sbjct: 72 NNVAKAHGGYSVFAG-VGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGAR 130 Query: 232 KMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 LT +T+AEYF +G +VLL +D+I RF + E++ G +P A GY ++ +++ Sbjct: 131 ARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM 190 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 + ERI + +KG+IT+V ++ V D+ DP + + LD VL+R++AE G YP Sbjct: 191 GSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA 248 Query: 351 VDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VDPL S SR+ D E V+ + ++ ++ +DI I G Sbjct: 249 VDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILG 293 >gi|46360720|gb|AAS89141.1| ATP synthase beta subunit [Sphaerocarpos texanus] Length = 382 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D+S + + PA + + F+TGI+V+D+ P Sbjct: 2 LGRIFNVLGEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 296 LQDIIAILG 304 >gi|3929531|gb|AAC79943.1| ATP synthase beta subunit [Anisoptera marginata] Length = 447 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 113/365 (30%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104 K D LGQ I + ++ V + E + G V G P GR Sbjct: 24 KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGALLSVPVGGLTLGR 83 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + + + PA R + F+TGI+V+D+ P G Sbjct: 84 IFNVLGEPID---NLGPVDTDTTSPIHRPAPAFIRLATKLSIFETGIKVVDLLAPYRRGG 140 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 200 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 201 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 319 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|333030305|ref|ZP_08458366.1| ATP synthase subunit beta [Bacteroides coprosuis DSM 18011] gi|332740902|gb|EGJ71384.1| ATP synthase subunit beta [Bacteroides coprosuis DSM 18011] Length = 506 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+ IDG SL + D + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGESIDGLSSLDRED-AYPIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ R + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKRLNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF---- 245 GD KKS+ +V +E P R L+ +T+AE F Sbjct: 210 GDEFKKSMEAGHWDLSKVDYDEVAKSQATLVFGQMNEPPGARSSVALSGLTVAESFRDMA 269 Query: 246 -SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 + ++L +D+I RF + E++ G +P A GY ++ SE+ + ERI + Sbjct: 270 AQTGSKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERIASTRN-- 327 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITEMGIYPAVDPLESSSRILDPH 387 Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389 + ++ ++ R +E +DI Sbjct: 388 IVGKAHYETAQRVSQILQRNKELQDI 413 >gi|104|emb|CAA29094.1| beta-subunit [Bos taurus] Length = 357 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 141/261 (54%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P+ G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 14 TGIKVVDLLAPIAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 72 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 73 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 132 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 133 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 190 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 191 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 250 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 251 RGVQKILQDYKSLQDIIAILG 271 >gi|3023341|sp|O03069|ATPB_EQUAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|1934690|gb|AAB51732.1| ATP synthase beta chain [Equisetum arvense] Length = 473 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D ++G + + + I P M+ + F+TGI+V+D+ P Sbjct: 107 LGRIFNVLGEPVD---NMGPVEATAKSPIHKPAPAFMDLETTVSIFETGIKVVDLLAPYR 163 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 223 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 224 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 283 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 284 EVSALLGRMPSAVGYQPTLATEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 341 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R++E Sbjct: 342 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTVL-QPWIVGEEHYEVAQGVKQTLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|212896662|gb|ACJ38534.1| membrane-bound ATP synthase subunit B [Galactia striata] Length = 470 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/304 (31%), Positives = 153/304 (50%), Gaps = 22/304 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ P Sbjct: 90 LGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 146 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + + Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESGVI 205 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF NVLL +D+I RF + Sbjct: 206 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAG 265 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 266 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 323 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + + DE + + + R++E Sbjct: 324 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRWIVGDEHYETAQRVKQTLQRYKE 383 Query: 386 TRDI 389 +DI Sbjct: 384 LQDI 387 >gi|126466064|ref|YP_001041173.1| V-type ATP synthase subunit B [Staphylothermus marinus F1] gi|171770012|sp|A3DNQ5|VATB_STAMF RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|126014887|gb|ABN70265.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region [Staphylothermus marinus F1] Length = 469 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/336 (29%), Positives = 169/336 (50%), Gaps = 26/336 (7%) Query: 43 VCLGDFV-VHQGKNSDNLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSA 99 V G+ V V G LGQVI ++ D I G +I L + + ++ S Sbjct: 30 VSYGEVVEVVLGSGETRLGQVIDVSRDATIIQVFGGVSDIDLKISKVRYRGETLKLPVSI 89 Query: 100 CWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 GR+ + LG+PIDG +D L + S++PP+ + +TGI ID Sbjct: 90 DMLGRIFDGLGRPIDGGPPIVPEDYLDINGSPINPASRLPPS-------EFIETGISAID 142 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFI 206 + GQ++ +F+GSG+ + + + R + F V+ + +G + FI Sbjct: 143 GLNSIVRGQKLPIFSGSGLPHNRIAAQIVRQARVRGKEEKF-AVVFAAIGVSYDDAMFFI 201 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMA-PLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 E++ ++ V + +SP++ ++A P A+T AE+ + K D +VL IL +T + Sbjct: 202 ENFKNYGALENAVAFINTADSPVIERIAIPRIALTAAEFLAWKHDMHVLAILTDMTNYCE 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 ++RE++ E+P RGYP ++++L + ER G E +KG++T + + + D+ PI Sbjct: 262 ALRELSAAREEVPSRRGYPGYMYTDLATIYERAGRVEGKKGSVTQMPILTMPNDDITHPI 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 D I +G +VL+R L +G YPP D L S+SRL Sbjct: 322 PDLTGYITEGQLVLSRQLWLKGIYPPFDILMSLSRL 357 >gi|86742388|ref|YP_482788.1| F0F1 ATP synthase subunit beta [Frankia sp. CcI3] gi|118573536|sp|Q2J6N3|ATPB_FRASC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|86569250|gb|ABD13059.1| ATP synthase F1 subcomplex beta subunit [Frankia sp. CcI3] Length = 479 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 94/298 (31%), Positives = 153/298 (51%), Gaps = 10/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V N LG P+D + + I P + + F TGI+VID+ P G Sbjct: 105 GHVFNVLGTPLDVKQI--EAETYWPIHRSAPAFDQLESKTEMFTTGIKVIDLLAPYVRGG 162 Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVRE-FIEDYLGDNLKKSV 218 +IG+F G+G+GK+ ++ R + F V + + VGER RE + F+E ++ + Sbjct: 163 KIGLFGGAGVGKTVIIQEMIRRVAKEFGGVSVFAGVGERTREGNDLFLEMTEAGVIEDTA 222 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P R L A+T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 223 LVFGQMDEPPGTRLRVALGALTMAEYFRDVQKQDVLLFIDNIFRFTQAGSEVSTLLGRMP 282 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + +IT++ ++ V D+ DP + + LD V Sbjct: 283 SAVGYQPTLADEMGVLQERI--TSTRGHSITSLQAIYVPADDLTDPAPATTFTHLDATTV 340 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 L+R++++ G YP V PL S SR+ D + E + ++ R+++ +DI I G Sbjct: 341 LDRAISDLGIYPAVSPLDSNSRILDARYLGQEHYDTAREVQRILQRYKDLQDIIAILG 398 >gi|57868960|gb|AAW57476.1| ATP synthase beta subunit [Shortia soldanelloides] Length = 493 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 161/312 (51%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 101 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLAP 157 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 158 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 216 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 276 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 334 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEEHYQTAQRVKQTLQR 393 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 394 YKELQDIIAILG 405 >gi|330850637|ref|YP_004376518.1| ATP synthase CF1 beta subunit [Ptilidium pulcherrimum] gi|302024766|gb|ADK89612.1| ATP synthase CF1 beta subunit [Ptilidium pulcherrimum] Length = 492 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 219 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 220 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDIAQGVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|209963710|ref|YP_002296625.1| ATP synthase F1, alpha subunit [Rhodospirillum centenum SW] gi|209957176|gb|ACI97812.1| ATP synthase F1, alpha subunit [Rhodospirillum centenum SW] Length = 520 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 105/342 (30%), Positives = 161/342 (47%), Gaps = 7/342 (2%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDS 118 G + ++ D + +G G +S G V G R+ GRV++ LG+P+DG Sbjct: 64 GLAMTLDRDTIGCVLLGDGARLSAGGTVHGSGAIVRVPVGPGLLGRVLDPLGRPLDGGPP 123 Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178 L+ + P R V + TG+ V+D P+ GQR + GK+ L Sbjct: 124 PHASRLN-PVERPAPAIAERAEVTQPLHTGLTVVDAMFPIGRGQRELIIGDRATGKTALA 182 Query: 179 --SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAP 235 +M A+ D I + + ++ VRE +E G L++S+VVVA+ D P L+ +AP Sbjct: 183 LDAMLAQRDGDVVCIYAAIAQKASSVREVVEALRAGGMLERSIVVVASPDAPPGLQWLAP 242 Query: 236 LTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLE 295 A+T+AE+F G + L++LD +T+ A R+IA + P +P VF RLLE Sbjct: 243 YAAMTMAEFFRDSGGHALVVLDDLTKHAAIHRQIALLLRQPPGREAFPGDVFYLHSRLLE 302 Query: 296 RIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 R + G++TA+ N + I ++ SI DG IVL+ L +G+ P VD Sbjct: 303 RSAKLSDAQGGGSLTALPVAETLAGNLSAYIPTNLISITDGQIVLDTKLFHQGQKPAVDV 362 Query: 354 LASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGY 395 SVSR+ K S + L SL +F E GG Sbjct: 363 GRSVSRVGGKTQSRSLRPLAESLRLDYAQFAELEAFTRFGGM 404 >gi|157502840|gb|ABV58386.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502843|gb|ABV58388.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502846|gb|ABV58390.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502849|gb|ABV58392.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502852|gb|ABV58394.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502855|gb|ABV58396.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502858|gb|ABV58398.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502861|gb|ABV58400.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502864|gb|ABV58402.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502867|gb|ABV58404.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502870|gb|ABV58406.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502873|gb|ABV58408.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502876|gb|ABV58410.1| ATP synthase CF1 beta subunit [Lobelia macrodon] gi|157502882|gb|ABV58414.1| ATP synthase CF1 beta subunit [Lobelia roughii] gi|157502885|gb|ABV58416.1| ATP synthase CF1 beta subunit [Lobelia roughii] Length = 498 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQNFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + ++ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQNVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|77921155|gb|ABB05343.1| AtpD [Micavibrio sp. EPB] Length = 425 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 94/304 (30%), Positives = 152/304 (50%), Gaps = 16/304 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ +G PID + I P +++ + TGI+V+D+ P G Sbjct: 67 GRILDVIGNPID-NLPAPNAKKRYPIHRPAPEFVDQATEAEQLVTGIKVVDLLCPYLKGG 125 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 +IG+F G+G+GK+ L++ A+ V VGER RE + + + D Sbjct: 126 KIGLFGGAGVGKTVTIQELINNIAKGHGGVSVFAG-VGERTREGNDLYHEMMDAGVIKLD 184 Query: 213 NLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +++AEYF +G +VL +D++ RF + E++ Sbjct: 185 GESKVGLVFGQMNEPPGARARVALTGLSMAEYFRDEEGQDVLFFMDNVFRFTQAGAEVSA 244 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ DP + S Sbjct: 245 LLGRIPSAVGYQPTLATDMGALQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFSH 302 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD VL+R +AE G YP VDPL S SR+ D +E K + + + ++ +DI Sbjct: 303 LDATTVLSRQIAELGIYPAVDPLDSTSRILDPRIVGEEHYKCAADVQKTLQTYKALQDII 362 Query: 391 LIGG 394 I G Sbjct: 363 AILG 366 >gi|20467405|gb|AAL27833.1| ATPase beta subunit [Thujopsis dolabrata] Length = 452 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D +LG D L+ + + PA + + F+TG Sbjct: 67 GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDTKFSIFETG 123 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 124 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 182 Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255 ++ + K +V +E P R LTA+T+AEYF +VLL Sbjct: 183 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 242 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 243 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 300 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + +E + Sbjct: 301 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 360 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 361 GVKQTLQRYKELQDIIAILG 380 >gi|157502825|gb|ABV58376.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007] gi|157502828|gb|ABV58378.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007] gi|157502831|gb|ABV58380.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007] gi|157502834|gb|ABV58382.1| ATP synthase CF1 beta subunit [Lobelia linnaeoides] gi|157502837|gb|ABV58384.1| ATP synthase CF1 beta subunit [Lobelia linnaeoides] Length = 498 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + ++ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQNVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|153805610|ref|YP_001382193.1| ATP synthase CF1 beta subunit [Leptosira terrestris] gi|190358675|sp|A6YGB6|ATPB_LEPTE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134270141|gb|ABO69330.1| CF1 beta subunit of ATP synthase [Leptosira terrestris] Length = 482 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 157/306 (51%), Gaps = 18/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+ +D ++G + I P ++ F+TGI+V+D+ P G Sbjct: 98 GRIFNVLGETVDNLGTVGNKQ-GLPIHRPAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GDN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +N Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINAEN 216 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 217 LSESKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 276 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ SE+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 277 ALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 334 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETRD 388 LD VL+R LA +G YP VDPL S S + + W S + + ++ + R++E +D Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVSKEHYECAQNVKQTLQRYKELQD 393 Query: 389 IRLIGG 394 I I G Sbjct: 394 IIAILG 399 >gi|111283728|gb|ABH09214.1| ATPase beta subunit [Neogrollea notabilis] Length = 443 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 59 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 115 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 116 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 175 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 176 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 235 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 236 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 293 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 294 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 352 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 353 KELQDIIAILG 363 >gi|305671655|gb|ADM63137.1| ATP synthase beta subunit [Valeriana jatamansi] Length = 489 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + KG+IT++ +V V D+ DP Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTTKGSITSIQAVYVPADDLTDP 329 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + D+ + + + R Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGDKHYETAQRVKQTLQR 389 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 390 YKELQDIIAILG 401 >gi|183206640|gb|ACC54518.1| ATP synthase beta subunit [Wahlenbergia linifolia] Length = 470 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 155/310 (50%), Gaps = 18/310 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+ ID + G S I P ++ F+TGI+V+D+ P Sbjct: 86 GATLGRIFNVLGETIDNLGPVDTGTTS-PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPY 144 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 145 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGV 203 Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 204 INEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 263 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 264 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R++ Sbjct: 322 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYK 381 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 382 ELQDIITILG 391 >gi|20269406|gb|AAM17930.1| ATP synthase beta subunit [Diapensia lapponica] Length = 470 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEEHYQTAQRVKQTLQ 396 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 397 RYKELQDIIAILG 409 >gi|325695308|gb|EGD37208.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK150] Length = 464 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/326 (30%), Positives = 162/326 (49%), Gaps = 15/326 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G S GQV+ + D +V + G + + F + S GR+ N Sbjct: 36 LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGHPLELPVSEDMVGRIFN 93 Query: 108 ALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 +GKPIDG D L + L ++ + P A R ++ +TGI ID L GQ++ V Sbjct: 94 GMGKPIDGGPDILPEKYLDIDGQAINPIA--RDYPDEFIQTGISAIDHLNTLVRGQKLPV 151 Query: 167 FAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 F+GSG+ L + AR SD V+ + +G E F+ D + +SV+ Sbjct: 152 FSGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVL 211 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPV 278 + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P Sbjct: 212 FINLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPG 271 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGYP +++ L L ER G +KG++T + + + D+ PI D I +G I+L Sbjct: 272 RRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIIL 331 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKA 364 +R L G PP++ L S+SRL DK Sbjct: 332 SRDLYNSGYRPPINVLPSLSRLKDKG 357 >gi|193216470|ref|YP_001999712.1| F0F1 ATP synthase subunit alpha [Mycoplasma arthritidis 158L3-1] gi|226739913|sp|B3PLV6|ATPA_MYCA5 RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP synthase F1 sector subunit alpha; AltName: Full=F-ATPase subunit alpha gi|193001793|gb|ACF07008.1| ATP synthase alpha subunit [Mycoplasma arthritidis 158L3-1] Length = 527 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 108/336 (32%), Positives = 165/336 (49%), Gaps = 13/336 (3%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117 LG + + D+V I +G I G+LV + +P GRV+NAL KPIDG Sbjct: 60 LGMTMNLEEDLVGIVVMGDDRSIVEGNLVKRMRQVISTPVGDELLGRVVNALAKPIDGK- 118 Query: 118 SLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 GK + S I P M RQ V + +TGI ID P+ GQR + GK+ Sbjct: 119 --GKINTSYHAPIFKVAPGVMARQEVNEPLETGILAIDAMIPIGKGQRELIIGDRQTGKT 176 Query: 176 TLL--SMFARSDCFDKVIISLVGERGREVREFIEDYLG--DNLKKSVVVVATSDESPILR 231 + ++ + I +G++ + + + D L D LK + ++ A++ ES L+ Sbjct: 177 AIAIDTILNQKGKHVYCIYIAIGQKNSTISQIV-DILNKHDALKYTTIISASAAESAPLQ 235 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 +AP T VTIAE + +KG +VL+I D +++ A + R ++ P YP VF Sbjct: 236 YIAPYTGVTIAEEWMAKGKDVLVIYDDLSKHAVAYRTLSLLLRRPPGREAYPGDVFYLHS 295 Query: 292 RLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 +LLER KE G+ITA+ + ++ + I +V SI DG I SL G+ P Sbjct: 296 QLLERAARLNKENGGGSITALPIIETQAEDISAYIPTNVISITDGQIFTKESLFNSGQRP 355 Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 +D SVSR+ A + KK+VSSL + ++ E Sbjct: 356 AIDIGYSVSRVGSAAQTKLMKKVVSSLKLELAQYNE 391 >gi|71277376|gb|AAZ29868.1| ATP synthase beta subunit [Chara zeylanica] Length = 349 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S+ + + PA + + F+TGI+V+D+ P Sbjct: 28 LGRIFNVLGEPVD---NLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 84 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 85 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144 Query: 212 -DNL--KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 145 EENICESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 322 LQDIIAILG 330 >gi|139522556|gb|ABO77667.1| ATP synthase beta subunit [Lysipomia sphagnophila] Length = 498 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 18/310 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+PID + G S I P + F+TGI+V+D+ P Sbjct: 104 GATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAPAFIELDTKLSIFETGIKVVDLLAPY 162 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E + Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRESGV 221 Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 + K K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 222 INEKKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + ++ + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEAAQNVKQTLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIITILG 409 >gi|159042997|ref|YP_001531791.1| ATP synthase F1 subunit alpha [Dinoroseobacter shibae DFL 12] gi|190358142|sp|A8LN46|ATPA1_DINSH RecName: Full=ATP synthase subunit alpha 1; AltName: Full=ATP synthase F1 sector subunit alpha 1; AltName: Full=F-ATPase subunit alpha 1 gi|157910757|gb|ABV92190.1| ATP synthase F1, alpha subunit [Dinoroseobacter shibae DFL 12] Length = 509 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/323 (29%), Positives = 163/323 (50%), Gaps = 5/323 (1%) Query: 75 VGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP 133 +G + +++G+ V GR P GRV++ALG+P D D + L+ + ++ P Sbjct: 79 LGPSQNVAMGEDVRRTGRVVSVPVGPATLGRVVDALGRPRDERDPVTDSPLA-PVEAEAP 137 Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFARSDCFDKVI 191 ++R V + TG++ +D P+ GQR + GK+++ ++ + D I Sbjct: 138 DILSRTPVSRPLATGLKAVDAAVPVGLGQRQLIIGDRQTGKTSIAVDTILNQKDTGVICI 197 Query: 192 ISLVGERGREVREFIEDYLGDNLKKSVVVVATSDE-SPILRKMAPLTAVTIAEYFSSKGD 250 +G+RG V + I G + VV+A DE +P L +AP A+++AE F+++G Sbjct: 198 YCAIGQRGDAVAKVIGALQGGEMLGQTVVIAAGDEDAPGLAYIAPYAAMSVAESFAAQGR 257 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VL++LD +T A + RE++ P +P +F RLLER G + G+ITA+ Sbjct: 258 DVLVVLDDLTHHARTYRELSLLLRRPPGREAFPGDIFYVHARLLERAGQFGEGAGSITAL 317 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 V +N + I ++ SI DG I L+ L ++P VD SVSR+ KA + + Sbjct: 318 PVVETQAENLSAYIPTNLISITDGQIYLSPKLVRTNQFPAVDLGVSVSRVGGKAQARAFR 377 Query: 371 KLVSSLTHLIHRFEETRDIRLIG 393 + +L + +FEE + G Sbjct: 378 AVGGNLRVTLSQFEELEEFARFG 400 >gi|4995183|emb|CAB44042.1| H(+)-transporting ATP synthase [Hermannia erodioides] Length = 484 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 110/365 (30%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + E ++ G V G + GR Sbjct: 39 KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 98 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I + P + F+TGI+V+D+ P G Sbjct: 99 IFNVLGEPVD---NLGPVDTRTTSPIHKRAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 155 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 215 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 216 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 275 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 276 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 333 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 334 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 393 Query: 390 RLIGG 394 I G Sbjct: 394 IAILG 398 >gi|86359451|ref|YP_471343.1| F0F1 ATP synthase subunit beta [Rhizobium etli CFN 42] gi|118573730|sp|Q2K3H0|ATPB_RHIEC RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|86283553|gb|ABC92616.1| H(+)-transporting ATP synthase protein, beta subunit [Rhizobium etli CFN 42] Length = 475 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D L I P + + + TGI+V+D+ P G Sbjct: 90 LGRIMNVIGEPVDEAGPLNTAH-KRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYAKG 148 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 149 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 207 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +T+AE+F +G +VL +D+I RF + E+ Sbjct: 208 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 267 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + G+IT+V ++ V D+ DP + Sbjct: 268 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 325 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 326 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 385 Query: 389 IRLIGG 394 I I G Sbjct: 386 IIAILG 391 >gi|116009025|gb|ABJ52181.1| AtpB [Phyllostachys edulis] Length = 495 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P +R LTA+T+AEYF +VLL +D+I RF Sbjct: 219 VINEKNIEESKVALVYGQMNEPPGVRMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|113910878|gb|ABI48171.1| ATPase beta subunit [Rhizogonium paramattense] Length = 456 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 164/310 (52%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 69 LGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAPYR 125 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 126 RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 184 Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 185 NEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 244 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 245 SEVSASLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 302 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 303 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 361 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 362 ELQDIIAILG 371 >gi|83592562|ref|YP_426314.1| F0F1 ATP synthase subunit beta [Rhodospirillum rubrum ATCC 11170] gi|114564|sp|P05038|ATPB_RHORU RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573735|sp|Q2RV18|ATPB_RHORT RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|46368|emb|CAA26340.1| unnamed protein product [Rhodospirillum rubrum] gi|83575476|gb|ABC22027.1| ATP synthase F1, beta subunit [Rhodospirillum rubrum ATCC 11170] Length = 474 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 152/306 (49%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + I + P + + TGI+VID+ P G Sbjct: 87 LGRIMNVIGEPVDERGPVVTAQ-RYPIHRQAPTFAEQATETEILVTGIKVIDLIAPYTKG 145 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIE----DYL 210 ++G+F G+G+GK+ L+ + + + VGER RE E I+ D Sbjct: 146 GKVGLFGGAGVGKTVLIQELINNVAKGHGGYSVFAGVGERTREGNDLYHEMIDAGIIDLE 205 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 GD K +V +E P R L +T AEYF +G +VL +D+I RF + E+ Sbjct: 206 GDK-SKVALVYGQMNEPPGARARVALAGLTQAEYFRDEEGQDVLFFVDNIFRFTQAGSEV 264 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 265 SALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPAASF 322 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD LNRS+AE G YP VDPL S SR D +E K+ + ++ ++ +D Sbjct: 323 AHLDATTTLNRSIAELGIYPAVDPLDSTSRALDPLVVGEEHYKVAREVQRVLQTYKSLQD 382 Query: 389 IRLIGG 394 I I G Sbjct: 383 IIAILG 388 >gi|15827576|ref|NP_301839.1| F0F1 ATP synthase subunit beta [Mycobacterium leprae TN] gi|221230053|ref|YP_002503469.1| F0F1 ATP synthase subunit beta [Mycobacterium leprae Br4923] gi|1168578|sp|P45823|ATPB_MYCLE RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|699347|gb|AAA63108.1| atpD [Mycobacterium leprae] gi|13093126|emb|CAC31526.1| ATP synthase [beta] chain [Mycobacterium leprae] gi|219933160|emb|CAR71240.1| ATP synthase [beta] chain [Mycobacterium leprae Br4923] Length = 485 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 97/301 (32%), Positives = 160/301 (53%), Gaps = 15/301 (4%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNR--QRVEKGFKTGIRVIDIFTPLC 159 G V NALG +D G GD + + PP+ R E +TG++V+D+ TP Sbjct: 106 GHVFNALGYCLD---EPGYGDEFEHWSIHRKPPSFEELEPRTEM-LETGLKVVDLLTPYV 161 Query: 160 HGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNLK 215 G +I +F G+G+GK+ L+ M R + + + VGER RE + ++E + LK Sbjct: 162 RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELQEVNVLK 221 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSG 274 + +V DE P R L+A+T+AE+F + +VLL +D+I RF + E++T G Sbjct: 222 DTALVFGQMDEPPGTRMRVALSALTMAEWFRDEASQDVLLFIDNIFRFTQAGSEVSTLLG 281 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 +P A GY ++ E+ L ERI + +IT++ +V V D++ DP + + LD Sbjct: 282 RMPSAVGYQPTLADEMGELQERITSTRGR--SITSMQAVYVPADDYTDPAPATTFAHLDA 339 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIG 393 L+RS+ +G +P VDPLAS S + D +E ++ + ++ R+++ +DI I Sbjct: 340 TTELSRSVFAKGIFPAVDPLASSSTILDPGIVGEEHYRVAQEVIRILQRYKDLQDIIAIL 399 Query: 394 G 394 G Sbjct: 400 G 400 >gi|288928045|ref|ZP_06421892.1| ATP synthase F1, beta subunit [Prevotella sp. oral taxon 317 str. F0108] gi|288330879|gb|EFC69463.1| ATP synthase F1, beta subunit [Prevotella sp. oral taxon 317 str. F0108] Length = 509 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 49/334 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N +GKPIDG +L+ME I + P ++ TGI+VID+ P Sbjct: 95 GRMLNVIGKPIDG-----MSELNMEGAYPIHREAPKFDELSTHKEMLATGIKVIDLLEPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ L+ + + + VGER RE + I D + Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMIESGVI 209 Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247 GD +K++ +V +E P R L+ +T+AE F Sbjct: 210 RYGDKFRKAMEEGKWDLSLVDPEELRQSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269 Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 G +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + Sbjct: 270 HGGKDGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TS 327 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 ++G+IT+V +V V D+ DP + + LD L+R + E G YP VDPL S SR+ Sbjct: 328 TKRGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRIL 387 Query: 362 DKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 D E + + ++ R++E +DI I G Sbjct: 388 DPLIVGKEHYECAQRVKQILQRYKELQDIIAILG 421 >gi|183206694|gb|ACC54545.1| ATP synthase beta subunit [Campanula scouleri] Length = 477 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 198 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + G+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTXNGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQR 376 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 377 YKELQDIITILG 388 >gi|113910844|gb|ABI48154.1| ATPase beta subunit [Diphyscium foliosum] Length = 448 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 66 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 122 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 123 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 182 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 183 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 242 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 359 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 360 KELQDIIAILG 370 >gi|34420418|gb|AAQ67451.1| ATP synthase beta [Drosophila simulans] gi|34420420|gb|AAQ67452.1| ATP synthase beta [Drosophila simulans] gi|34420422|gb|AAQ67453.1| ATP synthase beta [Drosophila simulans] gi|34420424|gb|AAQ67454.1| ATP synthase beta [Drosophila simulans] gi|34420426|gb|AAQ67455.1| ATP synthase beta [Drosophila simulans] Length = 376 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 93/285 (32%), Positives = 149/285 (52%), Gaps = 16/285 (5%) Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178 D + I ++ P + ++ TGI+V+D+ P G +IG+F G+G+GK+ L+ Sbjct: 12 DKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 71 Query: 179 SMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLKKSVVVVATSDESPILR 231 + A++ V VGER RE E IE L D K +V +E P R Sbjct: 72 NNVAKAHGGYSVFAG-VGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGAR 130 Query: 232 KMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 LT +T+AEYF +G +VLL +D+I RF + E++ G +P A GY ++ +++ Sbjct: 131 ARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM 190 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 + ERI + +KG+IT+V ++ V D+ DP + + LD VL+R++AE G YP Sbjct: 191 GSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA 248 Query: 351 VDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VDPL S SR+ D E V+ + ++ ++ +DI I G Sbjct: 249 VDPLDSTSRIMDPNIIGQEHYNVARGVQKILQDYKSLQDIIAILG 293 >gi|7708321|emb|CAB90087.1| ATP synthase beta subunit [Guaiacum sanctum] Length = 475 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 90 GVTLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 207 VINEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 324 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 385 KELQDIIAILG 395 >gi|46360677|gb|AAS89120.1| ATP synthase beta subunit [Herbertus alpinus] Length = 382 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 2 LGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 178 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 296 LQDIIAILG 304 >gi|195183507|dbj|BAG66967.1| ATP synthase beta subunit [Hybanthus galeottii] Length = 489 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 97 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + NVLL +D+I RF + Sbjct: 214 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQA 273 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 331 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 391 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 392 ELQDIIAILG 401 >gi|184127843|gb|ACC67821.1| ATP synthase beta chain [Christensenia aesculifolia] Length = 402 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + K PA + + F+TGI+V+D+ P Sbjct: 15 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQSDTKLSIFETGIKVVDLLAPYRR 72 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 73 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 132 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 133 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 192 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 193 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 250 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 251 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 309 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 310 QDIIAILG 317 >gi|123966850|ref|YP_001011931.1| F0F1 ATP synthase subunit beta [Prochlorococcus marinus str. MIT 9515] gi|166201726|sp|A2BYG3|ATPB_PROM5 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|123201216|gb|ABM72824.1| ATP synthase F1, beta subunit [Prochlorococcus marinus str. MIT 9515] Length = 486 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 158/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + D + I P + + K F+TGI+VID+ P Sbjct: 97 ATLGRIFNVLGEPVDEQGPVKTSD-TAPIHRSAPKLTDLETKPKVFETGIKVIDLLAPYR 155 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL------ 210 G ++G+F G+G+GK+ L+ + + + VGER RE + E++ Sbjct: 156 QGGKVGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVIN 215 Query: 211 GDNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 ++L +S V + +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 216 AEDLSQSKVALCFGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFVDNIFRFVQAGS 275 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 276 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 333 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL R LA +G YP VDPL S S + + D+ K ++ + R++E Sbjct: 334 TFAHLDATTVLARGLAAKGIYPAVDPLDSTSTMLQPSVVGDDHYKTARAVQSTLQRYKEL 393 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 394 QDIIAILG 401 >gi|21673859|ref|NP_661924.1| F0F1 ATP synthase subunit beta [Chlorobium tepidum TLS] gi|81860080|sp|Q8KDL4|ATPB1_CHLTE RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|21646993|gb|AAM72266.1| ATP synthase F1, beta subunit [Chlorobium tepidum TLS] Length = 480 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/293 (32%), Positives = 153/293 (52%), Gaps = 11/293 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 R+ + G ID + +++ + PP ++R+ + F+TGI++ID+ PL G Sbjct: 91 RMFDVFGNAIDRRGPVT--NVTWRSVHGAPPQLSRRSTKSEVFETGIKIIDLLVPLERGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 + G+F G+G+GK+ LL+ + + +S+ +GER RE E D L V Sbjct: 149 KAGLFGGAGVGKTVLLTEMIHNMVSKESGVSIFCGIGERCREGEELYRDMSEAGVLDNMV 208 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LTA+T+AEYF VLL++D+I RF + EI+ G++P Sbjct: 209 MVFGQMNEPPGSRFRVGLTALTMAEYFRDDLHQEVLLLIDNIFRFIQAGSEISGMIGQMP 268 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +EL L ERI + G IT++ +V V D+ DP A S L +V Sbjct: 269 SRLGYQPTIGTELSALEERI--ANTGTGAITSIQAVYVPADDFTDPAAVHTFSHLSASLV 326 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R A EG YP VDPL+S S++A ++ L + ++ ++ E +DI Sbjct: 327 LSRKRAGEGFYPAVDPLSSGSKMAGESIVGRRHYDLAREVRRVLAQYAELKDI 379 >gi|328871057|gb|EGG19428.1| ATP synthase beta chain [Dictyostelium fasciculatum] Length = 656 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 105/342 (30%), Positives = 171/342 (50%), Gaps = 20/342 (5%) Query: 68 DIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSM 126 +IV + I + ++ G V + G ++ GR++N +G+PIDG + D + Sbjct: 154 NIVRCVALEITDGLARGTTVLNTGAPLKVPVGRPTLGRIMNVIGEPIDGRGPI-ISDTYL 212 Query: 127 EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----A 182 I + P TGI+VID+ TP G +IG+F G+G+GK+ L+ A Sbjct: 213 PIWREPPRFDELAPSASILVTGIKVIDLLTPYARGGKIGLFGGAGVGKTVLIQELINNVA 272 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYL--------GDNLKKSVVVVATSDESPILRKMA 234 +S V VGER RE + + + G+ K S+V +E P R Sbjct: 273 KSHGGFSVFAG-VGERTREGNDLWNEMITAGVIKLDGEGSKVSLVF-GQMNEPPGARARV 330 Query: 235 PLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 LT +T+AEYF + +VLL +D+I RF + E++ G +P A GY ++ +++ + Sbjct: 331 TLTGLTVAEYFRDVENQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLATDMGSM 390 Query: 294 LERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDP 353 ERI + + G+IT+V +V V D+ DP + + LD VL+R+++E G YP VDP Sbjct: 391 QERI--TTTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAVSELGIYPAVDP 448 Query: 354 LASVSRLADKAWSADEKKLV-SSLTHLIHRFEETRDIRLIGG 394 L S S + D E V +S+ ++ ++ +DI I G Sbjct: 449 LDSTSLMLDPNIIGQEHYTVATSVQKILQEYKGLQDIIAILG 490 >gi|330928210|ref|XP_003302169.1| hypothetical protein PTT_13892 [Pyrenophora teres f. teres 0-1] gi|311322642|gb|EFQ89755.1| hypothetical protein PTT_13892 [Pyrenophora teres f. teres 0-1] Length = 517 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 152/305 (49%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G+PID + K I + P + + TGI+V+D+ P G Sbjct: 129 LGRIMNVTGEPIDERGPI-KATKYAPIHADPPEFTEQSTSAEVLVTGIKVVDLLAPYARG 187 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 188 GKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYHEMQETSVIQL 246 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ Sbjct: 247 DGDSKVALVFGQMNEPPGARARVALTGLTVAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 306 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 307 ALLGRIPSAVGYQPTLAIDMGIMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 364 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 365 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVIGEDHYNTATRVQQILQEYKSLQDI 424 Query: 390 RLIGG 394 I G Sbjct: 425 IAILG 429 >gi|157689152|gb|ABV65132.1| ATP synthase CF1 beta subunit [Euonymus americanus] Length = 498 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 160/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + ++ K PA + + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSLIHKSAPAFIQLETKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|126644128|ref|XP_001388200.1| ATP synthase beta chain, mitochondrial precursor [Cryptosporidium parvum Iowa II] gi|126117273|gb|EAZ51373.1| ATP synthase beta chain, mitochondrial precursor, putative [Cryptosporidium parvum Iowa II] Length = 540 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/342 (28%), Positives = 169/342 (49%), Gaps = 39/342 (11%) Query: 77 IGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPA 135 + E +S G+ V G P GR++N +G IDG + + I P Sbjct: 115 VTEGLSRGEKVIDTGSPICVPVGKATLGRMVNVMGNAIDGCGEI-NAKVKKPIHRTAPEY 173 Query: 136 MNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS----------- 184 M + TGI+ ID+ TP G +IG+F G+G+GK+ L+ + Sbjct: 174 MEQVMEPSLIVTGIKAIDLLTPFIKGGKIGLFGGAGVGKTVLIMELINNIAKKYGGYSVY 233 Query: 185 -----------DCFDKVII------SLVGER--GREVREFIEDYLGDNLKKSVVVVATSD 225 D +++++ S+VG R + R+ I D+LG K+ +V + Sbjct: 234 TGVGERIREGYDLYNEMLANGVNKKSIVGSRVDSKHKRQPIYDFLGS---KTALVYGQMN 290 Query: 226 ESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 E+P R LT +T+AEYF S +VL +D+I RF + E++ G LP GY Sbjct: 291 ETPGARARVALTGLTMAEYFRDSMMQDVLFFVDNIYRFTQAGSEVSALLGLLPTEIGYQP 350 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 ++ ++L +L ERI + + G+IT++ ++ + D+ NDP + + LD IVL+R ++E Sbjct: 351 TLATDLGKLQERI--TTTKNGSITSIQALYIPSDDINDPAPVAAFTHLDSTIVLSRKMSE 408 Query: 345 EGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEE 385 G +P +DPL S S++ D+ +E VS+ + ++ R+++ Sbjct: 409 VGIFPSIDPLESRSKVLDRNIIGEEHYKVSTEVLSILQRYKQ 450 >gi|20467401|gb|AAL27831.1| ATPase beta subunit [Thuja plicata] Length = 448 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D +LG D L+ + + PA + + F+TG Sbjct: 63 GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTKSPIHRSAPAFTQLDTKFSIFETG 119 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 120 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 178 Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255 ++ + K +V +E P R LTA+T+AEYF +VLL Sbjct: 179 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 238 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 239 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 296 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + +E + Sbjct: 297 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 356 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 357 GVKQTLQRYKELQDIIAILG 376 >gi|157502879|gb|ABV58412.1| ATP synthase CF1 beta subunit [Lobelia arnhemiaca] Length = 498 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + ++ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQNVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|71277380|gb|AAZ29870.1| ATP synthase beta subunit [Nitella acuminata] Length = 353 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S+ + + PA + + F+TGI+V+D+ P Sbjct: 28 LGRIFNVLGEPVD---NLGPVDTSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 84 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 85 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 145 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 322 LQDIIAILG 330 >gi|157488193|gb|ABV57773.1| ATP synthase CF1 beta subunit [Isotoma fluviatilis subsp. fluviatilis] Length = 498 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + ++ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQNVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|37543311|gb|AAL92720.1| ATP synthase beta subunit [Coleochaete sp. 201d1] Length = 402 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + + + + PA + + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---ELGPVDTTKVSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INADNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|289596935|ref|YP_003483631.1| H(+)-transporting two-sector ATPase [Aciduliprofundum boonei T469] gi|289534722|gb|ADD09069.1| H(+)-transporting two-sector ATPase [Aciduliprofundum boonei T469] Length = 459 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/330 (29%), Positives = 170/330 (51%), Gaps = 14/330 (4%) Query: 43 VCLGDFVVHQGKN-SDNLGQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA 99 V G+ V +G + + LGQV+ R N+ IV + G ++ + F +I S Sbjct: 24 VAYGEVVKIRGPDGKERLGQVLEARENMAIVQVFEGTRGLDVKSTTVKFLGETLKIGVSL 83 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV + G+PIDG + ++ + P+ R+ + +TGI ID L Sbjct: 84 EMLGRVFDGTGRPIDGGPDIIPEEMRDINGYPINPSA-REYPREFIQTGISTIDGMNTLV 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDY-LG 211 GQ++ +F+GSG+ + + + AR + F V +++ G E F +++ Sbjct: 143 RGQKLPIFSGSGMPHNEIAAQIARQAKLRGKGEKFAVVFVAM-GITAEEANFFRKEFERT 201 Query: 212 DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L+++V+ + +++ I R + P +T+AEY + D +VL+IL +T + ++REI+ Sbjct: 202 GALERTVLFLNLANDPAIERIVIPRMGLTVAEYLAYAKDMHVLVILTDMTNYCEALREIS 261 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P RGYP ++++L + ER G +KG+IT + + + D+ PI D Sbjct: 262 AAREEVPGRRGYPGYMYTDLATIYERAGRIIGKKGSITQIPILTMPDDDMTHPIPDLTGY 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 I +G IVL+R L G YPP++PL S+SRL Sbjct: 322 ITEGQIVLSRPLHRRGIYPPINPLLSLSRL 351 >gi|256819749|ref|YP_003141028.1| F0F1 ATP synthase subunit beta [Capnocytophaga ochracea DSM 7271] gi|315225151|ref|ZP_07866968.1| ATP synthase F1 sector beta subunit [Capnocytophaga ochracea F0287] gi|256581332|gb|ACU92467.1| ATP synthase F1, beta subunit [Capnocytophaga ochracea DSM 7271] gi|314944834|gb|EFS96866.1| ATP synthase F1 sector beta subunit [Capnocytophaga ochracea F0287] Length = 504 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 158/330 (47%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G +DG +L K GD + I + P + TGI+VID+ P G Sbjct: 89 GRLFNVIGDGVDGLGNLPKDGDNGLPIHREAPKFEELSTTTEVLFTGIKVIDLIEPYAKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---G 211 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E + G Sbjct: 149 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 208 Query: 212 DNL---------------------KKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 + K+ V +E P R L+ +TIAEYF Sbjct: 209 EGFMESMEKGGWDLSKVDRKALKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAG 268 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + + G Sbjct: 269 EGHGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKHG 326 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 327 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 386 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + + L+ R+++ +DI I G Sbjct: 387 LGKEHYECAQRVKELLQRYKQLQDIIAILG 416 >gi|4063532|gb|AAC98324.1| ATP synthase beta subunit [Brownlowia elata] Length = 456 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG-- 211 P G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINTIAKAHGCVSVFGGVGERTREGNDLYXEMXESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDN-VLLILDSITRFAH 264 NL +S V V +E P R L+A+T+AEYF + V L +D+I RF Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLSALTMAEYFRDVNEQXVXLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|57868930|gb|AAW57461.1| ATP synthase beta subunit [Impatiens auricoma] Length = 493 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 100 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 215 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E G++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 216 GVINEQNFGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 273 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 274 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLT 331 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 332 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 391 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 392 QRYKELQDIIAILG 405 >gi|189095386|ref|YP_001936399.1| ATP synthase CF1 beta subunit [Heterosigma akashiwo] gi|157694729|gb|ABV66005.1| ATP synthase CF1 beta chain [Heterosigma akashiwo] gi|157777960|gb|ABV70146.1| ATP synthase CF1 beta chain [Heterosigma akashiwo] Length = 474 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 154/306 (50%), Gaps = 17/306 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG P+D + ++ I P + F+TGI+V+D+ P G Sbjct: 91 GRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGG 150 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYL------GD 212 +IG+F G+G+GK+ L++ A++ V + ER RE + E+ Sbjct: 151 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVINKQ 209 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AE+F +VLL +D+I RF + E+ Sbjct: 210 NLPESKVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNKQDVLLFIDNIFRFVQAGSEV 269 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP + Sbjct: 270 SALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPATTF 327 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + K+ + ++ + R++E +D Sbjct: 328 AHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQKSIVGELHYATAQAVQKTLQRYKELQD 387 Query: 389 IRLIGG 394 I I G Sbjct: 388 IIAILG 393 >gi|6724287|gb|AAB51733.2| ATP synthase beta chain [Ophioglossum reticulatum] Length = 458 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 106/330 (32%), Positives = 165/330 (50%), Gaps = 21/330 (6%) Query: 81 ISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNR 138 ++ G VF G + P GR+ N LG+P+D LG D + K PA + Sbjct: 49 LTRGMQVFDTGAPLVVPVGESTLGRIFNVLGEPVD---ELGPVDADETSPIHKPAPAFTQ 105 Query: 139 QRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGE 197 + F+TGI+V+D+ P G +IG+F G+G+GK+ L+ + +S+ G Sbjct: 106 LDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGG 165 Query: 198 RGREVREFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS 246 G RE + Y+ N+ +S V V +ESP R LTA+T+AEYF Sbjct: 166 VGERTREGNDLYMEMKESKVINEQNVSESKVALVYGQMNESPGARMRVGLTALTMAEYFR 225 Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G Sbjct: 226 DVNKQDVLLSIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEG 283 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT++ +V V D+ DP + + LD VL+R LA +G YP VDPL S S + Sbjct: 284 SITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLI 343 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 +E K + + R++E +DI I G Sbjct: 344 VGEEHYKTAQGVKQTLQRYKELQDIIAILG 373 >gi|164566055|gb|ABY61170.1| ATP synthase beta subunit [Danaea antillensis] Length = 394 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D+ ++ + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NLGPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRHVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAILG 309 >gi|111283718|gb|ABH09209.1| ATPase beta subunit [Temnoma pulchellum] Length = 449 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPIDTSTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 184 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 243 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 302 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 361 KELQDIIAILG 371 >gi|164566047|gb|ABY61166.1| ATP synthase beta subunit [Christensenia aesculifolia] Length = 394 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNLGPVDAGTTSP--IHKSAPAFTQSDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|119368022|dbj|BAF40514.1| ATP synthase beta subunit [Picrodendron baccatum] Length = 489 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIELDTKLEIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211 P G +IG+F G+G+GK+ L+ + + + VGER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKNYGGVSVFGGVGERTREGNDLYKEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + S LD VL+R LA +G YP VDPL S S L S+ + + + R+ Sbjct: 331 PATTFSHLDATTVLSRKLAAKGIYPAVDPLDSTSTMLQPNIVSSKHYETAQKVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|118573538|sp|Q2PQH4|ATPB_FUCVE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|83596390|gb|ABC25543.1| ATP synthase CF1 beta subunit [Fucus vesiculosus] gi|269991277|emb|CAX12455.1| ATP synthase CF1 beta chain [Fucus vesiculosus] Length = 476 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID +LG + ++ I P + + F+TGI+V+D+ P Sbjct: 89 TTLGRIFNVLGQPID---NLGDTPSNETLPIHRSAPAFTDLETRPAIFETGIKVVDLLAP 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 205 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 206 INEKNLLESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 265 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 266 GSEVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTNQGSITSIQAVYVPADDLTDPAP 323 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + DE K + + R++ Sbjct: 324 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPLIVGDEHYKTAQLVKETLQRYK 383 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 384 ELQDIIAILG 393 >gi|157488196|gb|ABV57775.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007a] gi|157488199|gb|ABV57777.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007a] gi|157488202|gb|ABV57779.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007b] gi|157488205|gb|ABV57781.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007b] gi|157488208|gb|ABV57783.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007b] gi|157488211|gb|ABV57785.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007c] gi|157488214|gb|ABV57787.1| ATP synthase CF1 beta subunit [Lobelia sp. EBK-2007d] Length = 498 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMRES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEKNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + ++ + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQNVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIITILG 409 >gi|61196970|gb|AAX39470.1| ATP synthase beta subunit [Tolypella nidifica] gi|61196972|gb|AAX39471.1| ATP synthase beta subunit [Tolypella porteri] Length = 402 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ I P + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTTVTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|20467379|gb|AAL27820.1| ATPase beta subunit [Ephedra californica] Length = 449 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 78 LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLXINLAIFETGIKVVDLLAPYR 134 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + + Sbjct: 135 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVI 193 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 194 NEKNIIESKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 253 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 254 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 311 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S L + ++ + + R++E Sbjct: 312 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKE 371 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 372 LQDIIAILG 380 >gi|290490162|gb|ADD31488.1| ATP synthase CF1 beta subunit protein [Rhododendron simsii] Length = 498 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPLDTRTTSPIHRSAPAFIELETKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKET 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + D+ K+ + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYKIAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|291615436|ref|YP_003525593.1| ATP synthase F1, subunit beta [Sideroxydans lithotrophicus ES-1] gi|291585548|gb|ADE13206.1| ATP synthase F1, beta subunit [Sideroxydans lithotrophicus ES-1] Length = 473 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 153/308 (49%), Gaps = 23/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+PID + K D I P +TGI+VID+ P G Sbjct: 91 GRIMDVLGRPIDEVGPI-KSDEKRSIHQAAPKFDELSPSVDLLETGIKVIDLVCPFAKGG 149 Query: 163 RIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-----------E 207 ++G+F G+G+GK+ L++ A+ V VGER RE +F E Sbjct: 150 KVGLFGGAGVGKTVNMLELINNIAKQHSGLSVFAG-VGERTREGNDFYHEMSDAGVIDKE 208 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIR 267 D+ K +V +E P R L+ +T+AE F +G ++L +D+I R+ + Sbjct: 209 DF---TKSKVAMVFGQMNEPPGNRLRVALSGLTMAEKFRDEGRDILFFVDNIYRYTLAGT 265 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ E+ RL ERI + + G+IT++ +V V D+ DP + Sbjct: 266 EVSALLGRMPSAVGYQPTLAEEMGRLQERI--TSTKVGSITSIQAVYVPADDLTDPSPAT 323 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEET 386 LD +VL+R +A G YP VDPL S SR D +E V+ S+ + R++E Sbjct: 324 TFLHLDSTVVLSRDIASLGIYPAVDPLDSTSRQLDPLVVGEEHYSVARSVQQTLQRYKEL 383 Query: 387 RDIRLIGG 394 RDI I G Sbjct: 384 RDIIAILG 391 >gi|61968317|gb|AAX57085.1| ATP synthase beta subunit [Securinega durissima] Length = 479 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 157/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG P+D LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGDPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----------VR 203 G +IG+F G+G+GK+ L+ + A++ V + ER RE R Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESR 208 Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262 E+ +G++ K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 209 VINEENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRF 266 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ D Sbjct: 267 VQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTD 324 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIH 381 P + + LD VL+R LA +G YP VDPL S S L K + + + + Sbjct: 325 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGEEHYETAQRVKQTLQ 384 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 385 RYKEVQDIIAILG 397 >gi|182626103|ref|ZP_02953864.1| V-type ATPase, B subunit [Clostridium perfringens D str. JGS1721] gi|177908624|gb|EDT71145.1| V-type ATPase, B subunit [Clostridium perfringens D str. JGS1721] Length = 460 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 96/318 (30%), Positives = 161/318 (50%), Gaps = 17/318 (5%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+V+ +N D +V + G + + F I S GRV + +G+P D Sbjct: 42 GKVLEVNGDKAMVQLFEGSAGINLKNTKVRFLGRPLEIGVSEDMLGRVFDGMGRPKDNGP 101 Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 ++ + D++ E ++ V R + +TGI ID L GQ++ VF+GSG+ Sbjct: 102 NIIPEKRLDINGEAINPVA----RNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPH 157 Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 L + AR SD VI + +G E F++++ + +SV+ + + + Sbjct: 158 KELAAQIARQAKVLNSDSKFAVIFAAIGITFEEAEFFVDEFTKTGAIDRSVLFMNLASDP 217 Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 I R P A+T AEY + KG +VL+I+ IT + ++RE++ E+P RGYP + Sbjct: 218 AIERIATPRMALTTAEYLAYEKGMHVLVIMTDITNYCEALREVSAARKEVPGRRGYPGYL 277 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L L ER G ++G+IT + + + D+ PI D I +G I+L+R L ++G Sbjct: 278 YTDLSTLYERAGRLVGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKKG 337 Query: 347 RYPPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 338 IMPPIDVLPSLSRLKDKG 355 >gi|154489796|ref|ZP_02030057.1| hypothetical protein PARMER_00024 [Parabacteroides merdae ATCC 43184] gi|154089521|gb|EDN88565.1| hypothetical protein PARMER_00024 [Parabacteroides merdae ATCC 43184] Length = 505 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/326 (30%), Positives = 165/326 (50%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G PIDG L K ++ I + P + + TGI+VID+ P G Sbjct: 94 GRLMNVTGNPIDGMTELDKKG-ALPIHREPPKFEDLTTSREVLYTGIKVIDLLEPYSKGG 152 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ +++ F + + VGER RE +RE I+ + Sbjct: 153 KIGLFGGAGVGKTVLIMELINNIAKKNNGFS--VFAGVGERTREGNDLLREMIQSGVIRY 210 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF---S 246 G+ KKS+ +V +E P R L+ +TIAE F + Sbjct: 211 GEEFKKSMEAGHWDLSKIDYDELAKSQATLVFGQMNEPPGARSSVALSGLTIAESFRDLA 270 Query: 247 SKGD--NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 ++G+ ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + +K Sbjct: 271 AEGETKDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKK 328 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 329 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPL 388 Query: 365 WSADEK-KLVSSLTHLIHRFEETRDI 389 E + + ++ R +E +DI Sbjct: 389 IVGKEHYETAQRVKQILQRNKELQDI 414 >gi|89574043|gb|ABD77247.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Diceros bicornis] Length = 327 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 6 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 64 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 65 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 124 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 125 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 182 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E ++ Sbjct: 183 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYEVA 242 Query: 374 SSLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 243 RGVQKILQDYKSLQDIIAILG 263 >gi|56675681|emb|CAB63705.2| atp synthase beta subunit [Stanleya pinnata] Length = 499 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LG+ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGEEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|7708491|emb|CAB89939.1| ATP synthase beta subunit [Megacarpaea polyandra] Length = 482 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 40 KGRDILGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 99 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 217 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 334 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 394 Query: 390 RLIGG 394 I G Sbjct: 395 IAILG 399 >gi|34582340|sp|Q9MRR9|ATPB_BRASC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|7687964|emb|CAB89702.1| ATP synthase beta subunit [Brasenia schreberi] gi|14717968|gb|AAK72726.1| ATP synthase beta subunit [Brasenia schreberi] Length = 498 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 C GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GCTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|89574041|gb|ABD77246.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Ceratotherium simum] Length = 327 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 89/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 6 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 64 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 65 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 124 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 125 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 182 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E ++ Sbjct: 183 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYEVA 242 Query: 374 SSLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 243 RGVQKILQDYKSLQDIIAILG 263 >gi|5758907|gb|AAD50881.1| ATP synthase beta subunit [Ravenala madagascariensis] Length = 496 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 154/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTSQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|183206608|gb|ACC54502.1| ATP synthase beta subunit [Wahlenbergia gloriosa] Length = 488 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P ++ F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER E + ++ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTPEGNDLYKEMKDS 209 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 210 GVINEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 269 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 327 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R Sbjct: 328 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYQTAQSVKQTLQR 387 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 388 YKELQDIITILG 399 >gi|147843974|emb|CAN81591.1| hypothetical protein VITISV_004549 [Vitis vinifera] Length = 487 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/300 (31%), Positives = 152/300 (50%), Gaps = 9/300 (3%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGE 275 +V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ G Sbjct: 221 XALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGR 280 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + LD Sbjct: 281 MPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDAT 338 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 VL+R LA +G YP VDPL S S + +E + + + R++E +DI I G Sbjct: 339 TVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILG 398 >gi|20269438|gb|AAM17946.1| ATP synthase beta subunit [Shortia exappendiculata] Length = 490 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRXAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGTDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWILGEEHYQTAQRVKQTLQ 396 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 397 RYKELQDIIAILG 409 >gi|213646872|ref|ZP_03376925.1| F0F1 ATP synthase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 363 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 85/255 (33%), Positives = 135/255 (52%), Gaps = 7/255 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 30 LETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 89 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N + K +V +E P R LT +T+AE F +G +VLL +D+I Sbjct: 90 GNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIY 149 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + + G+IT+V +V V D+ Sbjct: 150 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKTGSITSVQAVYVPADDL 207 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379 DP + + LD +VL+R +A G YP VDPL S SR D E + + Sbjct: 208 TDPSPATTFAHLDATVVLSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDTARGVQSI 267 Query: 380 IHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 268 LQRYQELKDIIAILG 282 >gi|184127877|gb|ACC67838.1| ATP synthase beta chain [Equisetum ramosissimum subsp. debile] Length = 389 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D ++G + + + I P M+ + F+TGI+V+D+ P Sbjct: 1 LGRIFNVLGEPVD---NMGPVEATAKSPIHKPAPAFMDLETTVSIFETGIKVVDLLAPYR 57 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 58 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 117 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 118 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 177 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 178 EVSALLGRMPSAVGYQPTLATEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 235 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R++E Sbjct: 236 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTVL-QPWIVGEEHYEVAQGVKQTLQRYKE 294 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 295 LQDIIAILG 303 >gi|113910810|gb|ABI48137.1| ATPase beta subunit [Porella pinnata] Length = 473 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + + PA + + F+TGI+V+D+ P Sbjct: 84 ATLGRIFNVLGEPVD---NLGPVDASTTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 140 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 141 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 200 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 201 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 261 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + R+ Sbjct: 319 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQRY 377 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 378 KELQDIIAILG 388 >gi|183206638|gb|ACC54517.1| ATP synthase beta subunit [Wahlenbergia berteroi] Length = 462 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 18/310 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+ ID + G S I P ++ F+TGI+V+D+ P Sbjct: 86 GATLGRIFNVLGETIDNLGPVDTGTTS-PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPY 144 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL 214 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 145 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDSGV 203 Query: 215 --------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 204 INEQKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 263 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 264 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA G YP VDPL S S + +DE + S+ + R++ Sbjct: 322 ATTFAHLDATTVLSRGLAXXGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRYK 381 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 382 ELQDIITILG 391 >gi|33318667|gb|AAQ05217.1| ATP synthase beta subunit [Metasequoia glyptostroboides] Length = 478 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D +LG D L+ + + PA + + F+TG Sbjct: 81 GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDTKFSIFETG 137 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 138 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 196 Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255 ++ + K +V +E P R LTA+T+AEYF +VLL Sbjct: 197 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 256 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 257 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 314 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + +E + Sbjct: 315 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 374 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 375 GVKQTLQRYKELQDIIAILG 394 >gi|71277390|gb|AAZ29875.1| ATP synthase beta subunit [Lychnothamnus barbatus] Length = 354 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 23 LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 79 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 80 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 139 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 140 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 199 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 200 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 257 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 258 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 316 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 317 LQDIIAILG 325 >gi|21684927|emb|CAD11590.1| ATP synthase beta subunit [Streptochaeta spicata] Length = 451 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 215 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKETLQRY 392 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 393 KELQDIIAILG 403 >gi|19033055|gb|AAL83512.1|AF408784_1 ATP synthase beta subunit [Lychnothamnus barbatus] gi|61196964|gb|AAX39467.1| ATP synthase beta subunit [Lychnothamnus barbatus] Length = 402 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|108796774|ref|YP_636388.1| CF1 beta subunit of ATP synthase [Staurastrum punctulatum] gi|118573758|sp|Q32RY8|ATPB_STAPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|61393542|gb|AAX45683.1| CF1 beta subunit of ATP synthase [Staurastrum punctulatum] Length = 493 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D LG + ++ ++ + PA + + F+TGI+V+D+ P Sbjct: 105 LGRIFNVLGEPVD---ELGPVNATITSVIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 222 EENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 282 EVSALLGRMPSAVGYQPTLGTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W A+ + + + R++E Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKKTLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|11466794|ref|NP_039390.1| ATP synthase CF1 beta subunit [Oryza sativa Japonica Group] gi|11991|emb|CAA34003.1| unnamed protein product [Oryza sativa Japonica Group] gi|344014|dbj|BAA00334.1| ATP synthetase beta subunit [Oryza sativa Japonica Group] gi|226612|prf||1603356AJ ATPase beta Length = 498 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|212538521|ref|XP_002149416.1| ATP synthase F1, beta subunit, putative [Penicillium marneffei ATCC 18224] gi|210069158|gb|EEA23249.1| ATP synthase F1, beta subunit, putative [Penicillium marneffei ATCC 18224] Length = 519 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 152/305 (49%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G PID + K I ++ P + + TGI+V+D+ P G Sbjct: 130 LGRIMNVTGDPIDERGPI-KATKFAPIHAEPPSFAEQSTSAEVLVTGIKVVDLLAPYARG 188 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L++ A++ V VGER RE + + + Sbjct: 189 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 247 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 248 EGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 307 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 308 ALLGRIPSAVGYQPTLAVDMGIMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 365 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 366 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVVGEDHYHTATRVQQMLQEYKSLQDI 425 Query: 390 RLIGG 394 I G Sbjct: 426 IAILG 430 >gi|18976555|ref|NP_577912.1| V-type ATP synthase subunit B [Pyrococcus furiosus DSM 3638] gi|25091537|sp|Q8U4A5|VATB_PYRFU RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|18892112|gb|AAL80307.1| ATPase subunit B [Pyrococcus furiosus DSM 3638] Length = 462 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 19/315 (6%) Query: 60 GQVI--RINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ R NL IV + +I + F ++ S GR+ N +GKPIDG Sbjct: 42 GQVLDARENLAIVQVFEGTRDLDIKTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGP 101 Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 + + D+ ++ V A R ++ TGI ID L GQ++ +F+GSG+ Sbjct: 102 EIIPEDRRDVHGAPLNPVARAYPRDFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPH 157 Query: 175 STLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDE 226 + L + AR + F V+ + +G E F + + ++++V+ + +D+ Sbjct: 158 NKLAAQIARQAKVLGEEESF-AVVFAAMGITYEEANFFKKSFEETGAIERAVLFLNLADD 216 Query: 227 SPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTS 285 I R + P A+T+AEY + D +VL+IL +T + ++REI+ E+P RGYP Sbjct: 217 PAIERIITPRMALTVAEYLAFDYDMHVLVILTDMTNYCEALREISAAREEVPGRRGYPGY 276 Query: 286 VFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEE 345 ++++L + ER G +KG+IT + + + D+ PI D I +G IVL+R L Sbjct: 277 MYTDLATIYERAGRVRGKKGSITQMPILTMPDDDITHPIPDLTGYITEGQIVLSRDLHRR 336 Query: 346 GRYPPVDPLASVSRL 360 G YPP+D L S+SRL Sbjct: 337 GIYPPIDVLPSLSRL 351 >gi|303240207|ref|ZP_07326727.1| H(+)-transporting two-sector ATPase [Acetivibrio cellulolyticus CD2] gi|302592298|gb|EFL62026.1| H(+)-transporting two-sector ATPase [Acetivibrio cellulolyticus CD2] Length = 461 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 155/308 (50%), Gaps = 16/308 (5%) Query: 101 WCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV + LG+P+DG + + L M + P A N + +TG+ ID L Sbjct: 85 MLGRVFSGLGRPVDGGPNVIPDTRLDMNGIPMNPAARNYP--SEFIQTGVSAIDGLNTLV 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN 213 GQ++ +F+GSG+ + L + AR +D V+ + +G E FI D+ Sbjct: 143 RGQKLPIFSGSGLPHAQLAAQIARQAKVLGTDSKFAVVFAAIGITFEEADFFISDFKRTG 202 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271 + ++V+ + +++ I R P A+T AEY + + D +VL+IL IT +A ++RE++ Sbjct: 203 AIDRTVLFINLANDPAIERIATPRMALTAAEYLAFEKDMHVLVILTDITNYAEALREVSA 262 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 E+P RGYP ++++L L ER G + G+IT + + + D+ PI D I Sbjct: 263 ARKEVPGRRGYPGYLYTDLATLYERAGRKVSKDGSITLIPILTMPEDDKTHPIPDLTGYI 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEET 386 +G I+L R L + PP+D L S+SRL DK D ++ L R +E Sbjct: 323 TEGQIILGRELHRKAITPPIDVLPSLSRLKDKGIGKGKTREDHADTMNQLFAAYARGKEA 382 Query: 387 RDIRLIGG 394 +++ +I G Sbjct: 383 KELAVILG 390 >gi|257853486|gb|ACV71745.1| ATP synthase beta subunit [Ochthocosmus longipedicellatus] Length = 482 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID + G S I P + F+TGI+V+D+ P Sbjct: 90 ATLGRIFNVLGEPIDDLGPVDTGTTS-PIHRAAPAFIQLDTKFSIFETGIKVVDLLAPYR 148 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 208 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 DN+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 209 EDNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 268 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 269 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 326 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 327 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKEL 386 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 387 QDIIAILG 394 >gi|20467421|gb|AAL27841.1| ATPase beta subunit [Sequoiadendron giganteum] Length = 398 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D +LG D L+ + + PA + + F+TG Sbjct: 16 GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDTKFSIFETG 72 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 73 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 131 Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255 ++ + K +V +E P R LTA+T+AEYF +VLL Sbjct: 132 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 191 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 192 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 249 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + +E + Sbjct: 250 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 309 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 310 GVKQTLQRYKELQDIIAILG 329 >gi|44885334|dbj|BAD11910.1| ATP synthase beta subunit [Nitella pulchella] gi|44885336|dbj|BAD11911.1| ATP synthase beta subunit [Nitella pulchella] Length = 340 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|28202179|ref|NP_777420.1| ATP synthase CF1 beta subunit [Anthoceros formosae] gi|3915617|sp|Q31794|ATPB_ANTFO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|2760294|dbj|BAA24160.1| ATPase beta subunit [Anthoceros formosae] gi|27807881|dbj|BAC55356.1| ATPase beta subunit [Anthoceros formosae] gi|27808010|dbj|BAC55452.1| ATPase beta subunit [Anthoceros formosae] Length = 492 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D+S + + PA + + F+TGI+V+D+ P Sbjct: 105 LGRIFNVLGEPVD---NLGAIDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +K+S V Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESKV 219 Query: 220 -------------VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 220 INEQDISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|170293989|gb|ACB13088.1| ATP synthase beta subunit [Pseudococcomyxa simplex] Length = 367 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D SLG D + I P ++ F+TGI+V+D+ P Sbjct: 21 LGRIFNVLGEPVD---SLGPVDSKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYR 77 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 78 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESKVI 136 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 DNL S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 DEDNLSASKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 196 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 197 SEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 254 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + R++ Sbjct: 255 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKETLQRYK 313 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 314 ELQDIIAILG 323 >gi|156530119|gb|ABU75156.1| AtpB [Castela erecta] Length = 488 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K+ D +GQ+I + ++ V + E ++ G V G + GR Sbjct: 48 KSRDTVGQLINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 107 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I + P + F+TGI+V+D+ P G Sbjct: 108 IFNVLGEPVD---NLGPVDTRTTSPIHKRAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 165 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 224 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 225 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 284 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 285 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 342 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 343 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 402 Query: 390 RLIGG 394 I G Sbjct: 403 IAILG 407 >gi|149918543|ref|ZP_01907032.1| F0F1 ATP synthase subunit beta [Plesiocystis pacifica SIR-1] gi|149820619|gb|EDM80031.1| F0F1 ATP synthase subunit beta [Plesiocystis pacifica SIR-1] Length = 540 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 158/317 (49%), Gaps = 37/317 (11%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K + I K P ++ + F TGI+VID+ P G Sbjct: 137 LGRIMNVVGEPVDEQGEI-KTEEFRPIHRKAPEFTDQSVKVEPFVTGIKVIDLLAPYRRG 195 Query: 162 QRIGVFAGSGIGKSTLL--------------SMFAR--------SDCFDKVIISLV---- 195 +IG+F G+G+GK+ LL S+FA +D + ++I S V Sbjct: 196 GKIGLFGGAGVGKTVLLMELINNVGKTHGGYSVFAGVGERTREGNDLYFEMIESDVIDAD 255 Query: 196 -GERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVL 253 E REV E D K +V +E P R L+A+T AEYF G +V+ Sbjct: 256 WNEDTREVHEIKSDS-----SKVALVYGQMNEPPGARARVALSALTQAEYFRDDMGQDVM 310 Query: 254 LILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISV 313 L +D+I RF + E++ G +P A GY ++ +E+ L ERI + KG+IT+V ++ Sbjct: 311 LFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLSTEMGALQERI--TTTTKGSITSVQAI 368 Query: 314 LVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKL 372 V D+ DP + + LD VLNR+L E G YP VDPL S S L + + Sbjct: 369 YVPADDLTDPAPATTFAHLDATTVLNRALTEIGIYPAVDPLDSSSTILTPEVVGERHYGV 428 Query: 373 VSSLTHLIHRFEETRDI 389 ++ ++ +++E +DI Sbjct: 429 ARAVQQILQKYKELQDI 445 >gi|6815115|dbj|BAA90397.1| ATP synthase beta subunit [Oryza sativa (japonica cultivar-group)] Length = 498 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|77553343|gb|ABA96139.1| ATP synthase beta chain, putative [Oryza sativa Japonica Group] Length = 410 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 90 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHISAPAFIELDTKLSIFQTGIKVVDLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 207 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 266 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E+++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 267 AGSEVSSLLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVHADDLTDPA 324 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 325 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 384 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 385 KELQDIIAILG 395 >gi|148260678|ref|YP_001234805.1| F0F1 ATP synthase subunit beta [Acidiphilium cryptum JF-5] gi|190358247|sp|A5FZ54|ATPB_ACICJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|146402359|gb|ABQ30886.1| ATP synthase F1 subcomplex beta subunit [Acidiphilium cryptum JF-5] Length = 476 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 95/307 (30%), Positives = 156/307 (50%), Gaps = 18/307 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PID + + I + P + + TGI+V+D+ P G Sbjct: 88 GRILNVIGEPIDERGPI-PTTRTAPIHRQAPSFDEQATSAEILVTGIKVVDLLAPYLKGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY-------LGD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE + + LG+ Sbjct: 147 KIGLFGGAGVGKTVLIQELINNIAKGHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLGE 206 Query: 213 NL---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 K +V +E P R L+ +T+AEYF +G +VL +D+I RF + E Sbjct: 207 GTTEGSKVALVYGQMNEPPGARMRVGLSGLTMAEYFRDEEGQDVLFFVDNIFRFTQAGAE 266 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 267 VSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPATS 324 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETR 387 S LD LNR++AE+G YP VDPL S SR D +E V+ + ++ ++ + Sbjct: 325 FSHLDATTTLNRAIAEKGIYPAVDPLDSTSRALDPRIVGEEHYNVAREVQRILQSYKSLQ 384 Query: 388 DIRLIGG 394 DI I G Sbjct: 385 DIIAILG 391 >gi|222139893|ref|YP_002519961.1| ATP synthase CF1 beta chain [Ephedra equisetina] gi|220983562|dbj|BAH11329.1| ATP synthase CF1 beta chain [Ephedra equisetina] Length = 489 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 111 LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 167 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + + VGER RE + + + Sbjct: 168 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 227 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 228 EKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 287 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 288 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 345 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S L + ++ + + R++E Sbjct: 346 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 405 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 406 QDIIAILG 413 >gi|6688704|emb|CAB65233.1| ATP synthase beta subunit [Myoporum mauritianum] Length = 498 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D+S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDISTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|58081512|gb|AAW65231.1| AtpB [Pellia appalachiana] Length = 382 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/315 (31%), Positives = 157/315 (49%), Gaps = 26/315 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + I P F+TGI+V+D+ P Sbjct: 2 LGRIFNVLGEPVD---NLGPVNANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLSAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S G G RE + Y+ Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSAFGGVGERTREGNDLYMEMKESKVIN 118 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEY +VLL +D+I RF + Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYSRDVNKQDVLLFIDNIFRFVQAGS 178 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295 Query: 386 TRDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 296 LQDIIAI----PGLD 306 >gi|50233978|ref|YP_052756.1| ATP synthase CF1 beta subunit [Oryza nivara] gi|68565033|sp|Q6ENG7|ATPB_ORYNI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|148886912|sp|P0C2Z8|ATPB_ORYSI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|148886914|sp|P12085|ATPB_ORYSJ RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|148897909|sp|P0C2Z7|ATPB_ORYSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|49615002|dbj|BAD26785.1| ATPase beta subunit [Oryza nivara] Length = 498 Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|16416730|gb|AAL18389.1|AF313541_1 ATP synthase beta chain [Equisetum x ferrissii] Length = 395 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D ++G + + + I P M+ + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NMGPVEATAKSPIHKPAPAFMDLETTVSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSALLGRMPSAVGYQPTLATEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R++E Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTVL-QPWIVGEEHYEVAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAILG 309 >gi|212896664|gb|ACJ38535.1| membrane-bound ATP synthase subunit B [Tephrosia rhodesica] Length = 470 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 87 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + S+ + R+ Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQSVKQTLQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|153815572|ref|ZP_01968240.1| hypothetical protein RUMTOR_01808 [Ruminococcus torques ATCC 27756] gi|317502175|ref|ZP_07960349.1| V-type sodium ATPase [Lachnospiraceae bacterium 8_1_57FAA] gi|331088740|ref|ZP_08337650.1| V-type ATP synthase subunit beta [Lachnospiraceae bacterium 3_1_46FAA] gi|145847214|gb|EDK24132.1| hypothetical protein RUMTOR_01808 [Ruminococcus torques ATCC 27756] gi|316896384|gb|EFV18481.1| V-type sodium ATPase [Lachnospiraceae bacterium 8_1_57FAA] gi|330407263|gb|EGG86766.1| V-type ATP synthase subunit beta [Lachnospiraceae bacterium 3_1_46FAA] Length = 456 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/311 (30%), Positives = 158/311 (50%), Gaps = 16/311 (5%) Query: 98 SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + LG+PID G + L + + + P A R E+ +TG+ ID Sbjct: 82 SEDMLGRVFDGLGRPIDDGPEILPDARMDINGLPMNPAA--RCYPEEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ +F+ SG+ + L + AR +D V+ + +G E F+E + Sbjct: 140 TLVRGQKLPIFSASGLPHAQLAAQIARQAKVLGTDENFAVVFAAMGITFEESNFFVESFR 199 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268 L ++V+ + +++ I R P A+T AEY + K +VL+IL IT +A ++RE Sbjct: 200 ETGALDRTVLFINLANDPAIERIATPKMALTAAEYLAFEKEMHVLVILTDITNYADALRE 259 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ E+P RGYP ++++L + ER G + G+IT + + + D+ PI D Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLASIYERAGRQNGKNGSITMIPILTMPEDDKTHPIPDLT 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383 I +G I+L+R L +G PP+D L S+SRL DK AD ++ L R Sbjct: 320 GYITEGQIILSRDLYRKGVTPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFSAYARG 379 Query: 384 EETRDIRLIGG 394 ++ +++ +I G Sbjct: 380 KDAKELMVILG 390 >gi|119350467|gb|ABL63184.1| AtpB [Chaetophora incrassata] Length = 390 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 24/309 (7%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + + + I P + F+TGI+V+D+ P Sbjct: 39 GRIFNVLGEPVD---NLGPVETEQKLPIHRSAPAFTDLDTRLAIFETGIKVVDLLAPYRR 95 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFI----------E 207 G +IG+F G+G+GK+ L+ + +S+ VGER RE + E Sbjct: 96 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVINE 155 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 LG++ K +V +E P R LTA+T+AEYF +VLL +D+I F + Sbjct: 156 SNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFPFVQAG 213 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 214 SEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPA 271 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + DE + + R++E Sbjct: 272 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYACAQQVKQTLQRYKE 331 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 332 LQDIIAILG 340 >gi|6467943|gb|AAF13242.1|AF197609_1 ATPase beta subunit [Thottea tomentosa] Length = 493 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 173/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104 K D LGQ IR+ ++ V + + + G V G P GR Sbjct: 47 KGQDTLGQQIRVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAALSVPVGGATLGR 106 Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D S I P + F+TGI+V+D+ P G Sbjct: 107 IFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 163 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 164 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 223 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 224 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 283 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 284 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 341 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + R++E +DI Sbjct: 342 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 401 Query: 390 RLIGG 394 I G Sbjct: 402 IAILG 406 >gi|228016834|gb|ACP51660.1| ATP synthase CF1 beta subunit [Pinus attenuata] Length = 492 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 160/317 (50%), Gaps = 24/317 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G ++ I P F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219 Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + D VL+R LA +G YP VDPL S S + + W E+ ++ + + R+ Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQRY 396 Query: 384 EETRDIRLIGGYRPGVD 400 +E +DI I PG+D Sbjct: 397 KELQDIIAI----PGLD 409 >gi|124006346|ref|ZP_01691180.1| ATP synthase F1, beta subunit [Microscilla marina ATCC 23134] gi|123988003|gb|EAY27674.1| ATP synthase F1, beta subunit [Microscilla marina ATCC 23134] Length = 505 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 107/357 (29%), Positives = 173/357 (48%), Gaps = 47/357 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+ IDG ++ K D + I P + TGI+VID+ P G Sbjct: 90 GRLFNVVGEAIDGIEN-PKTDRRVSIHRAAPTFDQLTTETEVLFTGIKVIDLLEPYAKGG 148 Query: 163 RIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE----VREFIEDYL---GD 212 +IG+F G+G+GK+ L+ + + V + + VGER RE +RE IE + G+ Sbjct: 149 KIGLFGGAGVGKTVLIQELINNIAKAYAGVSVFAGVGERTREGNDLLREMIESGIVNYGE 208 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-----S 246 +K++ V +E P R L+ ++IAEYF + Sbjct: 209 EFEKALHEGGWPLDKIDREKLKESKATFVFGQMNEPPGARARVALSGLSIAEYFRDGDGT 268 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 KG+++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G+ Sbjct: 269 GKGNDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGVMQERI--TSTKRGS 326 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT+V ++ V D+ DP + + LD VL+R LA G YP VDPL S SR+ Sbjct: 327 ITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRKLASLGIYPAVDPLDSTSRILTADIL 386 Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILD---KAVHQVPIIYDFLKQ 419 +E + + + R+ E +DI I G+D + D K V++ I FL Q Sbjct: 387 GEEHYNIAQRVKETLQRYNELQDIIAI----LGLDELSDDDRKVVNKARRIQRFLSQ 439 >gi|113910868|gb|ABI48166.1| ATPase beta subunit [Physcomitrella patens] Length = 417 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 35 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 91 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 92 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 151 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 152 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 211 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 212 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 269 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 270 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|89574033|gb|ABD77242.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Tupaia glis] Length = 320 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 8 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 66 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 67 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 126 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 127 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 184 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 185 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 244 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 245 RGVQKILQDYKSLQDIIAILG 265 >gi|44885330|dbj|BAD11908.1| ATP synthase beta subunit [Nitella mirabilis] Length = 340 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|21633431|gb|AAM52190.1| ATP synthase beta subunit [Erycibe hellwigii] Length = 490 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LGKP+D + G S I + P + F+TGI+V+D+ P Sbjct: 102 GSTLGRIFNVLGKPVDNLGPVDTGTTS-PIHRRAPAFIQLDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 221 NEENIAESKVALVYGPMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|5001591|gb|AAD37042.1|AF092116_1 ATP synthase beta subunit [Circaeaster agrestis] Length = 486 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + S I P ++ F+TGI+V+D+ P Sbjct: 92 GATLGRIXNVLGEPVDNLGPVXTXTTS-PIHRSAPAFIDLDTKLSIFETGIKVVDLLAPY 150 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 210 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + NVLL +D+I RF + Sbjct: 211 NEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAG 270 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 271 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 328 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S L + + K ++ + R++E Sbjct: 329 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYKTAQNVKQTLQRYKE 388 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 389 LQDIIAILG 397 >gi|257852986|gb|ACV71504.1| ATP synthase beta subunit [Hua gabonii] Length = 491 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 153/306 (50%), Gaps = 22/306 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 220 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGAITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + DE K + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRRIVGDEHYKTAQRVKQTLQRY 398 Query: 384 EETRDI 389 +E +DI Sbjct: 399 KELQDI 404 >gi|119350491|gb|ABL63196.1| AtpB [Fusochloris perforata] Length = 393 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 161/308 (52%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D +G + + I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNLGPVGNKE-GLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 +IG+F G+G+GK+ L+ + AR+ V + ER RE + + + Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIARAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINEE 156 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIRE 268 N+ +S V V +E P R LTA+T+AEYF SK D VLL +D+I RF + E Sbjct: 157 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDFSKQD-VLLFIDNIFRFVQAGSE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + R++E Sbjct: 274 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKQTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|288806596|gb|ADC54203.1| RE21838p [Drosophila melanogaster] gi|288856373|gb|ADC55502.1| SD19625p [Drosophila melanogaster] Length = 353 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 10 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 68 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 69 NDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 128 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 129 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIY 186 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 187 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVA 246 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 247 RGVQKILQDYKSLQDIIAILG 267 >gi|241206625|ref|YP_002977721.1| F0F1 ATP synthase subunit beta [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860515|gb|ACS58182.1| ATP synthase F1, beta subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 478 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/306 (30%), Positives = 159/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D L I + P + + + TGI+V+D+ P G Sbjct: 93 LGRIMNVIGEPVDEAGPLVTAH-KRSIHQEAPSYVEQSTESQILVTGIKVVDLLAPYARG 151 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK- 216 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + N+ K Sbjct: 152 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESNVNKH 210 Query: 217 -------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 + +V +E P R LT +T+AE+F +G +VL +D+I RF + E+ Sbjct: 211 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 270 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + G+IT+V ++ V D+ DP + Sbjct: 271 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 328 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E V+ + + R++ +D Sbjct: 329 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYDVARKVQSTLQRYKALQD 388 Query: 389 IRLIGG 394 I I G Sbjct: 389 IIAILG 394 >gi|118917410|dbj|BAF40516.1| ATP synthase beta subunit [Drypetes littoralis] Length = 489 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D LG D + + K PA + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 G+N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINGENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L K + + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGKEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|89574021|gb|ABD77236.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Cavia porcellus] Length = 330 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 9 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 67 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 68 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 127 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 128 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 185 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 186 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 245 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 246 RGVQKILQDYKSLQDIIAILG 266 >gi|61968333|gb|AAX57093.1| ATP synthase beta subunit [Putranjiva zeylanica] Length = 478 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D LG D + + K PA + + F+TGI+V+D+ Sbjct: 92 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 G+N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 209 VINGENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L K + + + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGKEHYETAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|219853231|ref|YP_002467663.1| V-type ATP synthase subunit B [Methanosphaerula palustris E1-9c] gi|254764989|sp|B8GFQ7|VATB_METPE RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|219547490|gb|ACL17940.1| ATP synthase, B subunit [Methanosphaerula palustris E1-9c] Length = 464 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/348 (28%), Positives = 177/348 (50%), Gaps = 24/348 (6%) Query: 60 GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ + D+V + GIG++ + F ++ GR+++ GKPIDG Sbjct: 41 GQVLDTSDDLVVVQVFETTTGIGKD---SGVRFTGETIKMPVGRDMLGRILSGSGKPIDG 97 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + + ++I R +TGI ID L GQ++ +F+G+G+ + Sbjct: 98 GPEIVP-EKRLDITGAAINPYARASPSDFIETGISTIDGTNTLVRGQKLPIFSGAGLPHN 156 Query: 176 TLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227 + AR ++ F V+ + +G E F++D+ L+++VV + +D+ Sbjct: 157 NVALQIARQAKVPGSTEEF-AVVFAAMGITQEEANYFMQDFERTGALERAVVFLNLADDP 215 Query: 228 PILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 + R + P A+T AEY + + G +VL+IL +T + ++R+I E+P RGYP + Sbjct: 216 AVERIITPRLALTTAEYLAFELGMHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYM 275 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L L ER G + +KG++T + + + GD+ PIAD I +G IV++R L +G Sbjct: 276 YTDLASLYERAGIIKGQKGSVTQIPILTMPGDDITHPIADLTGYITEGQIVISRELHRKG 335 Query: 347 RYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390 YPP++ L S+SRL + K + ++ K VS + + E D+R Sbjct: 336 IYPPINVLPSLSRLMNLGIGKGHTREDHKKVSD--QMYAAYAEGNDLR 381 >gi|164566111|gb|ABY61198.1| ATP synthase beta subunit [Danaea nodosa] Length = 394 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 160/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VD L S S + + W E+ + + + R++E Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDGLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|119350471|gb|ABL63186.1| AtpB ['Chlorella' luteoviridis] Length = 392 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG P+D +G + + I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGDPVDNLGDVGAKE-GLPIHRPAPAFVDLDTKLAIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + + + Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESKVINEE 156 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIRE 268 K +V +E P R LTA+T+AEYF SK D VLL +D+I RF + E Sbjct: 157 DLSSSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDISKRD-VLLFIDNIFRFVQAGSE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEET 386 S LD VL+R+LA +G YP VDPL S S + + W EK + + + R++E Sbjct: 274 FSHLDATTVLSRALASKGIYPAVDPLDSTSTML-QPWIVGEKHYACAQDVKQTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|307343656|emb|CBJ19245.1| atpD synthase beta subunit [Micromonospora purpureochromogenes] Length = 298 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 140/256 (54%), Gaps = 8/256 (3%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGRE 201 +TGI+VID+ P G +IG+F G+G+GK+ L+ M R + + + VGER RE Sbjct: 1 LETGIKVIDLLAPYVKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTRE 60 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSI 259 + I + + K+ +V DE P R L+A+T+AEYF K VLL + +I Sbjct: 61 GNDLIAEMTESGVIDKTALVYGQMDEPPGTRLRVALSALTMAEYFRDVKKQEVLLFIYNI 120 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 RF + E++T G +P A GY ++ E+ L ERI + IT++ ++ V D+ Sbjct: 121 FRFTQAGSEVSTRLGRMPSAVGYQPTLADEMGELQERITSVRGQA--ITSMQAIYVPADD 178 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTH 378 + DP + + LD L RS++++G YP VDPLAS SR LA + + ++ + + Sbjct: 179 YTDPAPATTFAHLDATTNLERSISDKGIYPAVDPLASSSRILAPEFVGPEHFQVATEVKR 238 Query: 379 LIHRFEETRDIRLIGG 394 ++ R+++ +DI I G Sbjct: 239 ILQRYKDLQDIIAILG 254 >gi|111283730|gb|ABH09215.1| ATPase beta subunit [Leiomitra lanata] Length = 471 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPIDTSTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGAKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|313891210|ref|ZP_07824829.1| ATP synthase ab C terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120573|gb|EFR43693.1| ATP synthase ab C terminal domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 460 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 92/315 (29%), Positives = 159/315 (50%), Gaps = 11/315 (3%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ ++ D +V + G ++ + F ++ S GR+ + +GKP+DG Sbjct: 44 GQVLEVHHDKAVVQLFEGSSGINLAKSKVRFTGHPLELAVSEDMVGRIFDGMGKPLDGGP 103 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + ++I + ++R ++ +TGI ID L GQ++ VF+GSG+ + L Sbjct: 104 EL-IAEKFLDIDGQAINPISRDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNEL 162 Query: 178 LSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 + AR D V+ + +G E F+ED + +SV+ + +++ I Sbjct: 163 AAQIARQATVLGDDGKFAVVFAAIGITFEEAEFFMEDLRKTGAISRSVLFINLANDPAIE 222 Query: 231 RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R P A+T AEY + K +VL+I+ +T + ++REI+ E+P RGYP +++ Sbjct: 223 RIATPRIALTTAEYLAYEKNMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTN 282 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 L L ER G + G++T + + + D+ PI D I +G I+L+ +L G P Sbjct: 283 LSTLYERAGRLVGKAGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSHALYNSGLEP 342 Query: 350 PVDPLASVSRLADKA 364 P+D L S+SRL DK Sbjct: 343 PIDILPSLSRLKDKG 357 >gi|237688677|ref|YP_002905293.1| ATP synthase CF1 beta subunit [Pinus krempfii] gi|226951134|gb|ACO94197.1| ATP synthase CF1 beta subunit [Pinus krempfii] Length = 492 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/319 (32%), Positives = 163/319 (51%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRTAPAFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD V +R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|12585410|sp|O32467|VATB_THESI RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|2605628|dbj|BAA23343.1| ATPase beta subunit [Thermococcus sp.] Length = 463 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 102/351 (29%), Positives = 176/351 (50%), Gaps = 22/351 (6%) Query: 27 SSITSVYYTVTCLS--QYVCLGDFV-VHQGKNSDNLGQVI--RINLDIVYICPVGIGEEI 81 S+++ +Y + + + V G+ V + GQV+ R ++ IV + +I Sbjct: 7 STVSKIYGPLMIVQGVKGVAYGEVVEIETESGEKRKGQVLEAREDMAIVQVFEGTRDLDI 66 Query: 82 SLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNR 138 + F ++ S GR+ N +GKPIDG + + D+ ++ V A R Sbjct: 67 KTTRVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPR 126 Query: 139 QRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVI 191 ++ TGI ID L GQ++ +F+GSG+ + L + AR + F V+ Sbjct: 127 DFIQ----TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQF-AVV 181 Query: 192 ISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD 250 + +G E F + + ++++V+ + +D+ I R + P A+T+AEY + D Sbjct: 182 FAAMGITYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYD 241 Query: 251 -NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITA 309 VL+IL +T +A ++REI+ E+P RGYP ++++L + ER G +KG+IT Sbjct: 242 MQVLVILTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGKKGSITQ 301 Query: 310 VISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + + + D+ PI D I +G IVL+R L +G YPP+D L S+SRL Sbjct: 302 MPILTMPDDDITHPIPDLTGYITEGQIVLSRELHRKGIYPPIDVLPSLSRL 352 >gi|156598640|gb|ABU85576.1| ATP synthase CF1 beta subunit [Scaevola aemula] Length = 498 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPID---NLGTVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 220 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E K + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKTAQEVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|111283720|gb|ABH09210.1| ATPase beta subunit [Geocalyx caledonicus] Length = 449 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 60 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 116 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 117 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 176 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 177 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 236 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 237 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 294 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 295 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 353 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 354 KELQDIIAILG 364 >gi|183206506|gb|ACC54451.1| ATP synthase beta subunit [Codonopsis viridis] Length = 488 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N +S V V +E P R LTA+T+ EYF +VLL +D+I RF Sbjct: 211 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMGEYFRDVNKQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +DE + S+ + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSDEHYETAQSVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIITILG 399 >gi|56236588|gb|AAV84661.1| ATP synthase beta subunit [Cunninghamia lanceolata] Length = 423 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 161/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D LG D L+ + + PA + + F+TG Sbjct: 26 GPLSVPVGESTLGRIFNVLGEPVD---DLGPVDALTTSPIHRSAPAFTQLETKFSIFETG 82 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 83 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 141 Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255 ++ + K +V +E P R LTA+T+AEYF +VLL Sbjct: 142 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 201 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 202 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 259 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + +E + Sbjct: 260 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 319 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 320 GVKQTLQRYKELQDIIAILG 339 >gi|108773322|ref|YP_635877.1| CF1 beta subunit of ATP synthase [Oltmannsiellopsis viridis] gi|118573711|sp|Q20EW8|ATPB_OLTVI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|82541904|gb|ABB81945.1| CF1 beta subunit of ATP synthase [Oltmannsiellopsis viridis] Length = 481 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 104/328 (31%), Positives = 162/328 (49%), Gaps = 26/328 (7%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQR 140 D+V + GR+ N LG+P+D GD+S E I P ++ Sbjct: 80 DVVDTGAPLTVPVGTSTLGRIFNVLGEPVDN-----LGDVSNEGGLPIHRPAPLFVDLDT 134 Query: 141 VEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVG 196 FKTGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V + Sbjct: 135 QLSIFKTGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG- 193 Query: 197 ERGREVREFIEDYLG------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS- 247 ER RE + + DNL +S V V +E P R LTA+T+AEYF Sbjct: 194 ERTREGNDLYAEMKESKVINEDNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDI 253 Query: 248 KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNI 307 +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI + + G+I Sbjct: 254 NKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSI 311 Query: 308 TAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWS 366 T++ +V V D+ DP + + LD VL+R+LA +G YP VDPL S S L + Sbjct: 312 TSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPQTLG 371 Query: 367 ADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + ++ + R++E +DI I G Sbjct: 372 EEHYGCAQAVKTTLQRYKELQDIIAILG 399 >gi|21684871|emb|CAD11562.1| ATP synthase beta subunit [Lyginia barbata] Length = 491 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LGKP+D +LG D S I P + + F+TGI+V+D+ Sbjct: 98 GVTLGRIFNVLGKPVD---NLGPVDTSTISPIHRSAPAFIELETKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 214 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 215 VINERNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 393 KELQDIIAILG 403 >gi|297840991|ref|XP_002888377.1| ATPase beta subunit [Arabidopsis lyrata subsp. lyrata] gi|297334218|gb|EFH64636.1| ATPase beta subunit [Arabidopsis lyrata subsp. lyrata] Length = 498 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +++I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFINNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|42559030|gb|AAS20201.1| ATP synthase beta subunit [Strelitzia reginae] Length = 478 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 154/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 212 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 271 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 329 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + R Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQR 389 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 390 YKELQDIIAILG 401 >gi|37543468|gb|AAM08915.1| ATP synthase beta subunit [Cliftonia monophylla] Length = 464 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 159/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 193 Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + +N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 194 RVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 253 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 254 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 311 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + + + + + R Sbjct: 312 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKQTLQR 371 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 372 YKELQDIIAILG 383 >gi|111283722|gb|ABH09211.1| ATPase beta subunit [Paraschistochila tuloides] Length = 472 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S P PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|332105881|gb|AEE01403.1| ATP synthase beta chain [Malva pusilla] Length = 486 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 99 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 214 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E LG++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 215 GVINEQKLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 272 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 273 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 330 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 331 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 390 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 391 QRYKELQDIIAILG 404 >gi|113910858|gb|ABI48161.1| ATPase beta subunit [Dicranella heteromalla] Length = 470 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 161/312 (51%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 81 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 137 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 138 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 196 Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 197 VINEEKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 256 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 315 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 373 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 374 YKELQDIIAILG 385 >gi|297837989|ref|XP_002886876.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region [Arabidopsis lyrata subsp. lyrata] gi|297332717|gb|EFH63135.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region [Arabidopsis lyrata subsp. lyrata] Length = 608 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 112/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGQEINVTCEVQQLLGNNRVRDVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|71277388|gb|AAZ29874.1| ATP synthase beta subunit [Lychnothamnus barbatus] Length = 359 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 28 LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 84 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 85 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 145 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 322 LQDIIAILG 330 >gi|19920171|gb|AAM08603.1|AC092750_37 Putative atpB; ATPase beta subunit from chromosome 10 chloroplast insertion [Oryza sativa Japonica Group] gi|21327363|gb|AAM48268.1|AC122148_21 Putative atpB; ATPase beta subunit from chromosome 10 chloroplast insertion [Oryza sativa Japonica Group] gi|110288944|gb|ABB47307.2| ATP synthase beta chain, putative, expressed [Oryza sativa Japonica Group] Length = 498 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPTVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|327188928|gb|EGE56120.1| H(+)-transporting ATP synthase protein, beta subunit [Rhizobium etli CNPAF512] Length = 493 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D L I P + + + TGI+V+D+ P G Sbjct: 108 LGRIMNVIGEPVDEAGPLNTAH-KRAIHQDAPAYVEQSTEAQILVTGIKVVDLLAPYARG 166 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 167 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 225 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +T+AE+F +G +VL +D+I RF + E+ Sbjct: 226 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + G+IT+V ++ V D+ DP + Sbjct: 286 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 344 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IIAILG 409 >gi|113910824|gb|ABI48144.1| ATPase beta subunit [Blasia pusilla] Length = 461 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 102/320 (31%), Positives = 161/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D +LG D S P PA + + F+TG Sbjct: 63 GPLSVPVGEATLGRIFNVLGEPVD---NLGPVDASTTFPIHRPAPAFTQLDTKLSIFETG 119 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208 I+V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + Sbjct: 120 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 179 Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256 Y+ N+ +S V V +E P R LTA+T+AEYF +VLL + Sbjct: 180 YMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFI 239 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 240 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVP 297 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + W E+ + Sbjct: 298 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQ 356 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 357 GVKETLQRYKELQDIIAILG 376 >gi|89574045|gb|ABD77248.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Bos taurus] Length = 322 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 6 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 64 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 65 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 124 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 125 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 182 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 183 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 242 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 243 RGVQKILQDYKSLQDIIAILG 263 >gi|37543315|gb|AAL92722.1| ATP synthase beta subunit [Coleochaete sp. 40D2] Length = 391 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + + + + PA + + F+TGI+V+D+ P Sbjct: 32 ATLGRIFNVLGEPVD---ELGPVDTTKLSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 88 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 89 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 148 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 149 INSDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 208 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 209 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 266 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + R+ Sbjct: 267 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKKTLQRY 325 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 326 KELQDIIAILG 336 >gi|195183504|dbj|BAG66965.1| ATP synthase beta subunit [Hybanthus elatus] Length = 489 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGDEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|73537129|gb|AAZ77708.1| ATP synthase beta subunit [Nitella inversa] Length = 348 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + F+TGI+V+D+ P Sbjct: 28 LGRIFNVLGEPVD---NLGPVDTTLTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 84 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 85 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 145 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 322 LQDIIAILG 330 >gi|71277386|gb|AAZ29873.1| ATP synthase beta subunit [Nitella mirabilis] Length = 348 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 163/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 28 LGRIFNVLGEPVD---NLGPVDTTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 84 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 85 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 145 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 204 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 322 LQDIIAILG 330 >gi|119350565|gb|ABL63233.1| AtpB [Uronema belkae] Length = 383 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + + I P + F+ GI+V+D+ P Sbjct: 38 LGRIFNVLGEPVD---NLGPVETEQKLPIHRSAPAFTDLDTRLAIFERGIKVVDLLAPYR 94 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDY------L 210 G +IG+F G+G+GK+ L+ + +S+ VGER RE + + + Sbjct: 95 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYMEMKESGVIV 154 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 ESNLSESKVALVYGPMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 214 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + DE V+ + + R++E Sbjct: 273 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYGVAQKVKQTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|55056880|emb|CAF22240.1| ATP synthase beta subunit [Enkianthus chinensis] Length = 475 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKNGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE K+ + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYKIAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|44885338|dbj|BAD11912.1| ATP synthase beta subunit [Nitella furcata] gi|44885340|dbj|BAD11913.1| ATP synthase beta subunit [Nitella furcata] gi|44885342|dbj|BAD11914.1| ATP synthase beta subunit [Nitella inversa] gi|56342283|dbj|BAD74003.1| ATP synthase beta subunit [Nitella furcata] gi|56342285|dbj|BAD74004.1| ATP synthase beta subunit [Nitella japonica] gi|56342287|dbj|BAD74005.1| ATP synthase beta subunit [Nitella japonica] gi|56342289|dbj|BAD74006.1| ATP synthase beta subunit [Nitella japonica] Length = 340 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ + + PA + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTLTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|257852966|gb|ACV71494.1| ATP synthase beta subunit [Marathrum cf. oxycarpum Cachoeirc 9/1996] Length = 495 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 155/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID + L D + I P F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPID-NLGLVDNDTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 163 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 223 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 224 EENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 283 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 284 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 341 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S L K ++ + + + R++E Sbjct: 342 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGSEHYETAQKVKQTLQRYKEL 401 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 402 QDIIAILG 409 >gi|89574049|gb|ABD77250.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Hippopotamus amphibius] Length = 330 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 9 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 67 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 68 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 127 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 128 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 185 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 186 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 245 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 246 RGVQKILQDYKSLQDIIAILG 266 >gi|89574017|gb|ABD77234.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Rattus norvegicus] Length = 343 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 140/261 (53%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 19 TGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 77 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 78 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 137 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 138 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 195 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 196 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVA 255 Query: 375 -SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 256 RGVQKILQDYKSLQDIIAILG 276 >gi|169786011|ref|XP_001827466.1| ATP synthase F1-sector subunit beta [Aspergillus oryzae RIB40] gi|238506943|ref|XP_002384673.1| ATP synthase F1, beta subunit, putative [Aspergillus flavus NRRL3357] gi|83776214|dbj|BAE66333.1| unnamed protein product [Aspergillus oryzae] gi|220689386|gb|EED45737.1| ATP synthase F1, beta subunit, putative [Aspergillus flavus NRRL3357] Length = 517 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 94/305 (30%), Positives = 153/305 (50%), Gaps = 16/305 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N G P+D + K I ++ P + + + TGI+V+D+ P G Sbjct: 128 LGRILNVTGDPVDERGPV-KATKYAPIHAEAPEFVEQSTEGEILVTGIKVVDLLAPYARG 186 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L++ A++ V VGER RE + + + Sbjct: 187 GKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTG-VGERTREGNDLYHEMQETGVIQL 245 Query: 215 ---KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIA 270 K +V +E P R LT +TIAEYF +G +VLL +D+I RF + E++ Sbjct: 246 EGESKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVS 305 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + + Sbjct: 306 ALLGRIPSAVGYQPTLAVDMGGMQERI--TTTTKGSITSVQAVYVPADDLTDPAPATTFA 363 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDI 389 LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ +DI Sbjct: 364 HLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQDHYDTATRVQQMLQEYKSLQDI 423 Query: 390 RLIGG 394 I G Sbjct: 424 IAILG 428 >gi|158340798|ref|YP_001521966.1| F0F1 ATP synthase subunit beta [Acaryochloris marina MBIC11017] gi|190358282|sp|A8ZNR6|ATPB_ACAM1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|158311039|gb|ABW32652.1| ATP synthase F1, beta subunit [Acaryochloris marina MBIC11017] Length = 456 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/293 (32%), Positives = 144/293 (49%), Gaps = 10/293 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR N G PIDG L KG + + + P R TGI+ ID+ PL G Sbjct: 72 GRAFNVFGDPIDGLGPL-KG-MKRSLHGQAVPLHQRTTGTDILVTGIKAIDLLAPLERGS 129 Query: 163 RIGVFAGSGIGKSTLLSMFARS--DCFDKV-IISLVGERGREVREFIEDYLGDN-LKKSV 218 + G+F G+G+GK+ L++ + +D V I +GER RE E + L +V Sbjct: 130 KAGLFGGAGVGKTVLITEMIHNIVSRYDGVSIFCGIGERSREGEELYREMKAAGVLNNTV 189 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R A+T+AEYF + +VLL++D++ RF + E++ G+LP Sbjct: 190 MVFGQMNEPPGSRFRVGHAALTMAEYFRDQAHRDVLLMIDNVFRFIQAGSEVSGLMGQLP 249 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +EL L ERI G IT+V +V + D+ DP A S L IV Sbjct: 250 SRVGYQPTLATELAELEERI--CSTAHGAITSVQAVYIPADDLTDPAAVHTFSHLSASIV 307 Query: 338 LNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETRDI 389 L+R EG YP VDPL S S+ L ++ ++ + +E+ +DI Sbjct: 308 LSRKRTSEGLYPAVDPLQSGSKMLTPSVVGQRHYQVAQAVRKTLAEYEDLKDI 360 >gi|113910832|gb|ABI48148.1| ATPase beta subunit [Riccardia latifrons] Length = 472 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 154/310 (49%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG +++ I P F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVNANITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + LD VL+R LA +G YP VDPL S S + DE + + + R++ Sbjct: 318 ATTFGHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPWIVGDEHYETAQGVKQTLQRYK 377 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 378 ELQDIIAISG 387 >gi|46360708|gb|AAS89135.1| ATP synthase beta subunit [Podomitrium phyllanthus] Length = 382 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 2 LGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 296 LQDIIAILG 304 >gi|110915622|gb|ABH02599.1| ATP synthase beta subunit [Desmazeria sicula] Length = 490 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG + + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+K+S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEENIKESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|19033059|gb|AAL83514.1|AF408786_1 ATP synthase beta subunit [Nitella opaca] Length = 402 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ P PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTTITFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|257076362|ref|ZP_05570723.1| V-type ATP synthase subunit B [Ferroplasma acidarmanus fer1] Length = 458 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/292 (28%), Positives = 150/292 (51%), Gaps = 9/292 (3%) Query: 88 FHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKT 147 F F++ S GR+ N G+P+D + D ++I +R+ + +T Sbjct: 73 FTGSTFKLPVSDDMLGRIFNGFGEPVDNGPKIYSKD-KVDITGAAINPYSREEPSEFIET 131 Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDK------VIISLVGERGRE 201 GI ID L GQ++ +F+G+G+ + L + A+ K V+ +G E Sbjct: 132 GISTIDGMNTLVMGQKLPIFSGAGLSHNRLATQIAKQAKTLKGGEKFGVVFGAIGITSEE 191 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSI 259 F++ + L +SV+ + + + + R + P A+T AEY + + D N+L+IL + Sbjct: 192 ANYFMKQFESSGALSESVIFLNLASDPSMDRIILPRVALTTAEYLAYEKDMNMLVILTDM 251 Query: 260 TRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDN 319 T + ++REI+++ E+P RGYP ++++L + ER G + G+IT + + + GD+ Sbjct: 252 TNYCEALREISSSREEIPGRRGYPGYMYTDLSTIYERAGKIKGRNGSITQIPILTMPGDD 311 Query: 320 HNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK 371 +P+ D I +G I L+R L+ + YP VD L S+SRL ++ +D + Sbjct: 312 ITNPVPDLTGYITEGQITLSRDLSRKDIYPEVDVLLSLSRLMNQGIGSDHTR 363 >gi|305671685|gb|ADM63152.1| ATP synthase beta subunit [Dipelta yunnanensis] Length = 489 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + KG+IT++ +V V D+ DP Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTTKGSITSIQAVYVPADDLTDP 329 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + D+ + + + R Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGDKHYETAQRVKQTLQR 389 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 390 YKELQDIIAILG 401 >gi|170293991|gb|ACB13089.1| ATP synthase beta subunit [Microthamnion kuetzingianum] Length = 367 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D +G + + I P ++ F+TGI+V+D+ P G Sbjct: 21 LGRIFNVLGEPVDNLGPVGNKE-GLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRG 79 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 +IG+F G+G+GK+ L+ + AR+ V + ER RE + + Sbjct: 80 GKIGLFGGAGVGKTVLIMELINNIARAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINE 138 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF SK D VLL +D+I RF + Sbjct: 139 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDISKQD-VLLFIDNIFRFVQAGS 197 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 198 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 255 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + R++E Sbjct: 256 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKQTLQRYKE 314 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 315 LQDIIAILG 323 >gi|145553116|ref|XP_001462233.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430071|emb|CAK94860.1| unnamed protein product [Paramecium tetraurelia] Length = 499 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/312 (30%), Positives = 160/312 (51%), Gaps = 39/312 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G PID + + + I + P +++ + TGI+V+D+ P G Sbjct: 120 GRIMNVIGDPIDERGPI-ETKIRYPIHREAPSFVDQGSGAEILITGIKVVDLLAPYARGG 178 Query: 163 RIGVFAGSGIGKSTLL--------------SMFA-RSDCFDKVIISLVGERGREVREFIE 207 +IG+F G+G+GK+ L+ S+FA R+D + +++ S V Sbjct: 179 KIGLFGGAGVGKTVLIQELINNVAKAHGGYSVFAGRNDLYHEMVASGV------------ 226 Query: 208 DYLGDNLK---KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFA 263 NL + ++ +E P R LT +T+AEYF +G +VLL +D+I RF Sbjct: 227 ----INLSGGSRCALIYGQMNEPPGARARVGLTGLTVAEYFRDEEGKDVLLFIDNIFRFT 282 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ ++L +L ERI + +KG+IT+V ++ V D+ DP Sbjct: 283 QACSEVSALLGRIPSAVGYQPTLATDLGQLQERI--TTTKKGSITSVQAIYVPADDLTDP 340 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHR 382 + + LD VL+R+L E G YP VDPL S SR+ D ++ V+ + L+ Sbjct: 341 APATTFAHLDATTVLSRALTELGIYPAVDPLDSSSRMMDPNIVGEKHYTVTRGVQKLLQD 400 Query: 383 FEETRDIRLIGG 394 ++ +DI I G Sbjct: 401 YKSLQDIIAILG 412 >gi|113910884|gb|ABI48174.1| ATPase beta subunit [Hedwigia ciliata] Length = 472 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|20467389|gb|AAL27825.1| ATPase beta subunit [Ephedra andina] Length = 461 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 83 LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 139 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + + VGER RE + + + Sbjct: 140 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 199 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 200 EKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 259 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 260 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 317 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S L + ++ + + R++E Sbjct: 318 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 377 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 378 QDIIAILG 385 >gi|20467369|gb|AAL27815.1| ATPase beta subunit [Ephedra frustillata] Length = 458 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 80 LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 136 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + + VGER RE + + + Sbjct: 137 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 196 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 197 EKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 256 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 257 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 314 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S L + ++ + + R++E Sbjct: 315 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 374 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 375 QDIIAILG 382 >gi|330996920|ref|ZP_08320785.1| ATP synthase F1, beta subunit [Paraprevotella xylaniphila YIT 11841] gi|329571994|gb|EGG53665.1| ATP synthase F1, beta subunit [Paraprevotella xylaniphila YIT 11841] Length = 507 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/330 (31%), Positives = 164/330 (49%), Gaps = 44/330 (13%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 A GRV+N +G IDG +L + S I P + ++ TGI+VID+ P Sbjct: 91 AQIRGRVMNVVGDAIDGMPALDESGAS-PIHRDPPKFEDLSTTQEVLFTGIKVIDLLEPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 150 LKGGKIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESG 207 Query: 210 L---GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF 245 + GD KS+ +V +E P R L+ +T+AE F Sbjct: 208 VIKYGDEFLKSMEAGHWDLSKVDMNEVEKSQVAMVFGQMNEPPGARSSVALSGLTLAESF 267 Query: 246 --SSKGD---NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 ++KGD ++L +D+I RF + E++ G +P A GY ++ SE+ ++ ERI + Sbjct: 268 RDNNKGDGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGQMQERI--T 325 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ Sbjct: 326 STKNGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRI 385 Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 D E + + ++ R +E +DI Sbjct: 386 LDPLIVGQEHYETAQRVKQILQRNKELQDI 415 >gi|21684869|emb|CAD11561.1| ATP synthase beta subunit [Anarthria scabra] Length = 491 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 154/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LGKP+D +LG D S I P + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGKPVD---NLGPVDTSTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 214 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 215 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKLNVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKGGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQKVKQTLQRY 392 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 393 KELQDIIAILG 403 >gi|7708141|emb|CAB89940.1| ATP synthase beta subunit [Afrostyrax sp. Cheek 5007] Length = 491 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 153/306 (50%), Gaps = 22/306 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ P Sbjct: 102 ATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 158 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 217 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 218 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 277 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G IT++ +V V D+ DP Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGAITSIQAVYVPADDLTDPA 335 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + DE K + + R+ Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQRRIVGDEHYKTAQRVKQTLQRY 395 Query: 384 EETRDI 389 +E +DI Sbjct: 396 KELQDI 401 >gi|20092952|ref|NP_619027.1| V-type ATP synthase subunit B [Methanosarcina acetivorans C2A] gi|25091536|sp|Q8TIJ0|VATB_METAC RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|19918265|gb|AAM07507.1| H(+)-transporting ATP synthase, subunit B [Methanosarcina acetivorans C2A] Length = 460 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 30/351 (8%) Query: 60 GQVIRINLDIVYICPV-GIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG--- 115 GQV+ + DIV + G G ++F ++ S GR+++ G P DG Sbjct: 42 GQVLDSSSDIVVVQVFEGTGGLDKDCGVIFTGETLKLPASIDLLGRILSGSGDPRDGGPR 101 Query: 116 ---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHGQRIGVFAGSG 171 D L +M +++PP K F +TGI ID L GQ++ +F+ SG Sbjct: 102 IVPDQLLDINGAAMNPYARLPP--------KDFIQTGISTIDGTNTLVRGQKLPIFSASG 153 Query: 172 IGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224 + + + AR S+ V+ + +G E + F+ D+ L+++VV + + Sbjct: 154 LPHNEIALQIARQASVPGSESAFAVVFAAMGITNEEAQYFMSDFEKTGALERAVVFLNLA 213 Query: 225 DESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 D+ + R + P A+T AEY + G +VL+IL IT +A ++R++ E+P RGYP Sbjct: 214 DDPAVERIVTPRMALTAAEYLAYEHGMHVLVILTDITNYAEALRQMGAARNEVPGRRGYP 273 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 ++++L L ER G + KG++T + + + GD+ PI D I +G IV+ R L Sbjct: 274 GYMYTDLATLYERAGIVKGAKGSVTQIPILSMPGDDITHPIPDLSGYITEGQIVVARELH 333 Query: 344 EEGRYPPVDPLASVSRLADKAW----SADEKKLVSSLTHLIHRFEETRDIR 390 +G YPP++ L S+SRL + + ++ K VS + + E RD+R Sbjct: 334 RKGIYPPINVLPSLSRLMNSGIGPGKTREDHKAVSD--QMYAGYAEGRDLR 382 >gi|153806532|ref|ZP_01959200.1| hypothetical protein BACCAC_00796 [Bacteroides caccae ATCC 43185] gi|149131209|gb|EDM22415.1| hypothetical protein BACCAC_00796 [Bacteroides caccae ATCC 43185] Length = 505 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 105/330 (31%), Positives = 162/330 (49%), Gaps = 52/330 (15%) Query: 103 GRVINALGKPIDGDDSLG-KGDLSMEIMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPLCH 160 GR++N +G IDG L KG S+ + PP + V++ TGI+VID+ P Sbjct: 93 GRLMNVVGDSIDGMKELDRKGAYSIH---RDPPKFEDLTTVQEVLFTGIKVIDLLEPYAK 149 Query: 161 GQRIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE---- 207 G +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 150 GGKIGLFGGAGVGKTVLIQELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVI 207 Query: 208 --------------------DYLGDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYF 245 DY + L+KS V + +E P R L+ +T+AE F Sbjct: 208 RYGEAFKESMEKGDWDLSKVDY--NELEKSQVSLIFGQMNEPPGARASVALSGLTVAESF 265 Query: 246 SSKGD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPS 300 G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 266 RDAGSEGEKRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--T 323 Query: 301 EKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 KG+IT+V +V V D+ DP + S LD VL+R + E G YP VDPLAS SR+ Sbjct: 324 STRKGSITSVQAVYVPADDLTDPAPATTFSHLDATTVLDRKITELGIYPAVDPLASTSRI 383 Query: 361 ADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 D E + ++ R +E +DI Sbjct: 384 LDPHIVGQEHYDTAQRVKQILQRNKELQDI 413 >gi|113910828|gb|ABI48146.1| ATPase beta subunit [Pallavicinia lyellii] Length = 472 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDTGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAISG 387 >gi|113910752|gb|ABI48108.1| ATPase beta subunit [Sphaerocarpos donnellii] Length = 457 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D+S + + PA + + F+TGI+V+D+ P Sbjct: 68 ATLGRIFNVLGEPVD---NLGPVDVSTIFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 124 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 125 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 184 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 185 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 244 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 245 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 302 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 303 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 361 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 362 KELQDIIAILG 372 >gi|6688861|emb|CAB65308.1| ATP synthase beta subunit [Nolana humifusa] Length = 498 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S M + + PA + + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|6688962|emb|CAB65337.1| ATP synthase beta subunit [Petunia axillaris] Length = 498 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S M + + PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|14718149|gb|AAK72813.1| ATP synthase beta subunit [Nolana humifusa] Length = 483 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S M + + PA + + F+TGI+V+D+ P Sbjct: 90 ATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 146 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 206 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 207 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 266 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 267 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 324 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 325 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 384 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 385 ELQDIIAILG 394 >gi|156530117|gb|ABU75155.1| AtpB [Castela erecta] Length = 493 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K+ D +GQ+I + ++ V + E ++ G V G + GR Sbjct: 45 KSRDTVGQLINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 104 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I + P + F+TGI+V+D+ P G Sbjct: 105 IFNVLGEPVD---NLGPVDTRTTSPIHKRAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 161 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 162 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 221 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 222 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 281 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 282 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 339 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 340 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 399 Query: 390 RLIGG 394 I G Sbjct: 400 IAILG 404 >gi|44885328|dbj|BAD11907.1| ATP synthase beta subunit [Nitella flexilis] Length = 340 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D ++ P PA + + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTITFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|255961390|ref|YP_003097583.1| ATP synthase CF1 subunit beta [Dendrocalamus latiflorus] gi|255040267|gb|ACT99927.1| ATP synthase CF1 subunit beta [Dendrocalamus latiflorus] Length = 498 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|118917408|dbj|BAF40512.1| ATP synthase beta subunit [Aristogeitonia monophylla] Length = 480 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + + F+TGI+V+D+ Sbjct: 87 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIELDTKLEIFETGIKVVDLLA 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211 P G +IG+F G+G+GK+ L+ + + + VGER RE + ++ Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGVSVFGGVGERTREGNDLYKEMKESG 203 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 204 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L +D + + + R+ Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGSDHYETAQKVKQTLQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|61968315|gb|AAX57084.1| ATP synthase beta subunit [Savia dictyocarpa] Length = 479 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/311 (33%), Positives = 158/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE RE E Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYREMKESG 208 Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + +NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 209 VINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|5758916|gb|AAD50890.1| ATP synthase beta subunit [Strelitzia nicolai] Length = 496 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 154/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|73920440|sp|Q4J8L8|VATB_SULAC RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B Length = 466 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/307 (30%), Positives = 161/307 (52%), Gaps = 19/307 (6%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S GR+ LG+P+D + G+ S + P++ R+ E+ +TG+ ID T Sbjct: 87 SEEMLGRIFTPLGEPLDNGPQVLSGEKRDINGSPLNPSV-REYPEEFIQTGVSAIDGLTS 145 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIED 208 L GQ++ +F+GSG+ + L + A+ V+ + +G R E R F E+ Sbjct: 146 LLRGQKLPIFSGSGLPANQLAAQIAKQATVRGEESNFAVVFAAIGIRYDEALFFRRFFEE 205 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 N + + V +++ P L+ + P TA+T+AEY + + D ++L IL +T + ++R Sbjct: 206 TGAIN--RVAMFVTLANDPPSLKILTPKTALTLAEYLAYEKDMHILAILIDMTNYCEALR 263 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + E+P GYP ++++L ER G +KG+IT + + + D+ PI D Sbjct: 264 ELSASKEEVPGRGGYPGYMYTDLAVTYERAGKVRGKKGSITQMPILTMPNDDITHPIPDL 323 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA----DKAWSADEKKLVSSLTHLIHRF 383 I +G IVL+RSL +G YPP++ LAS+SRL + + D+ K +S+ L + Sbjct: 324 TGYITEGQIVLDRSLFNKGIYPPINVLASLSRLMRDGIGEGKTRDDHKDLSN--QLFAAY 381 Query: 384 EETRDIR 390 +DIR Sbjct: 382 ARAQDIR 388 >gi|113910848|gb|ABI48156.1| ATPase beta subunit [Polytrichum juniperinum] Length = 448 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 66 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 122 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 123 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 182 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 183 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 242 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRY 359 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 360 KELQDIIAILG 370 >gi|116254139|ref|YP_769977.1| F0F1 ATP synthase subunit beta [Rhizobium leguminosarum bv. viciae 3841] gi|118573731|sp|Q1MAZ2|ATPB_RHIL3 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|115258787|emb|CAK09893.1| putative ATP synthase beta chain [Rhizobium leguminosarum bv. viciae 3841] Length = 478 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/306 (30%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D L I P + + + TGI+V+D+ P G Sbjct: 93 LGRIMNVIGEPVDEAGPLVTAH-KRAIHQDAPSYVEQSTESQILVTGIKVVDLLAPYARG 151 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK- 216 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + N+ K Sbjct: 152 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESNVNKH 210 Query: 217 -------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 + +V +E P R LT +T+AE+F +G +VL +D+I RF + E+ Sbjct: 211 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 270 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + G+IT+V ++ V D+ DP + Sbjct: 271 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 328 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 329 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 388 Query: 389 IRLIGG 394 I I G Sbjct: 389 IIAILG 394 >gi|62902813|gb|AAY19321.1| ATP synthase beta subunit [Lepidobotrys staudtii] Length = 480 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 87 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDSKLSIFETGIKVVDLLA 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 204 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|253729564|ref|YP_003029747.1| AtpB [Bambusa oldhamii] gi|246367074|gb|ACS94685.1| AtpB [Bambusa oldhamii] Length = 498 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|164566089|gb|ABY61187.1| ATP synthase beta subunit [Danaea grandifolia] gi|164566091|gb|ABY61188.1| ATP synthase beta subunit [Danaea grandifolia] gi|164566125|gb|ABY61205.1| ATP synthase beta subunit [Danaea nodosa] Length = 394 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|8452749|emb|CAB89990.1| ATP synthase beta subunit [Simarouba glauca] Length = 477 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 G + N LG+P+D +LG B + + K PA + + F+TGI+V+B+ Sbjct: 90 GATLGXIFNVLGEPVD---NLGPVBTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVBLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSIFGGVGERTREGNDLYMEMKESG 206 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 385 KELQDIIAILG 395 >gi|62902843|gb|AAY19336.1| ATP synthase beta subunit [Stackhousia monogyna] Length = 488 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELETKFSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|7708262|emb|CAB90053.1| ATP synthase beta subunit [Cyrilla racemiflora] Length = 464 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 77 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 133 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 192 Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 193 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 252 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 253 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 310 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + + + + + R Sbjct: 311 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKQTLQR 370 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 371 YKELQDIIAILG 382 >gi|7019707|emb|CAB75846.1| ATP synthase beta chain [Amphidinium operculatum] Length = 548 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 84/270 (31%), Positives = 144/270 (53%), Gaps = 22/270 (8%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE 201 F+TGI+V+D+ TP G ++G+F G+G+GK+ L+ R+ + +SL +GER RE Sbjct: 208 FETGIKVVDVLTPYKKGGKVGLFGGAGVGKTVLIMELIRNLAYSHNGLSLFSGIGERSRE 267 Query: 202 VREFIEDYLGDNL---------------KKSVVVVATSDESPILRKMAPLTAVTIAEYFS 246 + + + K +V +++P R A+T+AEYF Sbjct: 268 ANDLYVEMQESGIILLAEDSSNPYFSAESKVALVFGQMNDTPGARFRVANAALTMAEYFR 327 Query: 247 S-KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 G ++L+ +D+I RF + E++T G +P A GY ++ +E+ L ERI P+ G Sbjct: 328 DVNGQDLLVFMDNIFRFVQAGSELSTLLGRMPSAVGYQPTLATEMGTLQERIVPT--LFG 385 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT++ +V V D+ DP ++ + LD VL+R LA +G YP VDPLAS S+ ++ Sbjct: 386 SITSIQAVYVPADDITDPAPVAIFTHLDAITVLSRGLAAKGIYPAVDPLASTSKALTASF 445 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + + S+ ++R++E +D+ I G Sbjct: 446 VGERHYNVAQSIIQCLNRYKELQDLIAILG 475 >gi|11467384|ref|NP_043241.1| ATP synthase CF1 beta subunit [Cyanophora paradoxa] gi|1352028|sp|P48081|ATPB_CYAPA RecName: Full=ATP synthase subunit beta, cyanelle; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|1016185|gb|AAA81272.1| beta subunit of the F1 portion of ATP synthase [Cyanophora paradoxa] Length = 485 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/303 (33%), Positives = 157/303 (51%), Gaps = 22/303 (7%) Query: 103 GRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D LG D ++ I P + F+TGI+V+D+ P Sbjct: 98 GRIFNVLGEPVD---ELGAVVCDSTLPIHRPSPAFTQLETKSSIFETGIKVVDLLAPYRR 154 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD 212 G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E + D Sbjct: 155 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKESKVID 213 Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 214 ENNLPASKVALVYGQMNEPPGARMRVALTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + KG+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTTKGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + ++ + + ++ R++E Sbjct: 332 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVGEKHYACAQRVKGILQRYKEL 391 Query: 387 RDI 389 +DI Sbjct: 392 QDI 394 >gi|294101976|ref|YP_003553834.1| H(+)-transporting two-sector ATPase [Aminobacterium colombiense DSM 12261] gi|293616956|gb|ADE57110.1| H(+)-transporting two-sector ATPase [Aminobacterium colombiense DSM 12261] Length = 459 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 18/351 (5%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHWGR--FRISPSACWCGRVINALGKPIDGDD 117 GQ+++I DI I ++ G+ R ++ G+V+N G+ IDG Sbjct: 44 GQILQIQDDICVIQVFDGTMGLNTGETTVWLERDVVKMPVGLSLVGQVLNGRGRSIDGTP 103 Query: 118 -SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 S DL + M P + R +TGI ID+ L GQ++ +F+GSG+ + Sbjct: 104 LSFIDKDLPITGMPINP--VRRTSPNAYVETGISSIDMMNTLVRGQKLPIFSGSGLPANE 161 Query: 177 LLSMFARSDCFDK------VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + + + VI + +G RE R FI+ + + + + + +S + Sbjct: 162 IAAQIVQQAAVPGRETDFLVIFAAMGITRREARYFIDTFESTGAINNGIFFMNLASDSAV 221 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R + P A+T AEYF+ KG +VL+I+ + + S+REI+ E+P RGYP ++S Sbjct: 222 ERLLTPRMALTAAEYFAFEKGYDVLVIMTDMLYYCESLREISAAREEVPGRRGYPGYMYS 281 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L + ER G E +G+IT + + + D+ P+ D I +G IVL+R + + G Y Sbjct: 282 DLAEIYERAGCVENCQGSITQIPIITMPDDDMTHPVVDLSGYITEGQIVLDRGIHDRGAY 341 Query: 349 PPVDPLASVSRLADKAWSADE-----KKLVSSLTHLIHRFEETRDIRLIGG 394 PP++ L S+SRL +K + + L L R E +RLI G Sbjct: 342 PPINVLPSLSRLMNKGIGKGKTFDYHRALADQLYASYARALELSRLRLIVG 392 >gi|288803179|ref|ZP_06408614.1| ATP synthase F1, beta subunit [Prevotella melaninogenica D18] gi|302346236|ref|YP_003814534.1| ATP synthase F1, beta subunit [Prevotella melaninogenica ATCC 25845] gi|288334440|gb|EFC72880.1| ATP synthase F1, beta subunit [Prevotella melaninogenica D18] gi|302151189|gb|ADK97450.1| ATP synthase F1, beta subunit [Prevotella melaninogenica ATCC 25845] Length = 507 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 49/334 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR++N +G+PIDG ++L SME I + P + ++ +TGI+VID+ P Sbjct: 95 GRMMNVIGQPIDGMEAL-----SMEGAYPIHREAPKFEDLSTHKEMLQTGIKVIDLLEPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL----- 210 G +IG+F G+G+GK+ L+ + + + VGER RE + I D L Sbjct: 150 MKGGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVI 209 Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSS 247 G+ +K++ +V +E P R L+ +T+AE F Sbjct: 210 RYGEKFRKAMDEGKWDLSLVDQEELQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRD 269 Query: 248 KGD------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 G +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + Sbjct: 270 HGGKNGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGTMQERI--TS 327 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA 361 + G+IT+V +V V D+ DP + + LD L+R + E G YP VDPL S SR+ Sbjct: 328 TKHGSITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRIL 387 Query: 362 DKAW-SADEKKLVSSLTHLIHRFEETRDIRLIGG 394 D D + + L+ + E +DI I G Sbjct: 388 DPLIVGKDHYECAQRVKQLLQHYNELQDIIAILG 421 >gi|139389271|ref|YP_001123037.1| ATPase beta subunit [Aethionema grandiflorum] gi|190358250|sp|A4QJK6|ATPB_AETGR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134286233|dbj|BAF49861.1| ATPase beta subunit [Aethionema grandiflorum] Length = 490 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D LG+ I + ++ V + E + G D+V + GR Sbjct: 50 KGRDTLGEEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGTPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|57868950|gb|AAW57471.1| ATP synthase beta subunit [Rhododendron impeditum] Length = 493 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 100 GATLGRIFNVLGEPVD---NLGPLDTRTTSPIHRSAPAFIELETKLLIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKET 215 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 216 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 275 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 276 QAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 333 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + D+ K+ + + R Sbjct: 334 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYKIAQRVKQTLQR 393 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 394 YKELQDIIAILG 405 >gi|183206658|gb|ACC54527.1| ATP synthase beta subunit [Legousia hybrida] Length = 497 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+ ID +LG D + I P ++ F+TGI+V+D+ Sbjct: 103 GATLGRIFNVLGETID---NLGPVDTRTTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLA 159 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKDS 218 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 219 GVINEEKFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 278 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 279 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKNGSITSIQAVYVPADDLTDP 336 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +DE K S+ + R Sbjct: 337 APATTFAHLDATTVLSRGLAAKGIYPAVDPLXSTSTMLQPRVVSDEHYKTAQSVKQTLQR 396 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 397 YKELQDIITILG 408 >gi|155029339|dbj|BAF75553.1| ATP synthase beta subunit [Elateriospermum tapos] Length = 486 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 155/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 94 ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF + Sbjct: 211 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQA 270 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 328 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 388 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 389 ELQDIIAILG 398 >gi|195183499|dbj|BAG66963.1| ATP synthase beta subunit [Hybanthus bigibbosus] Length = 489 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 109/366 (29%), Positives = 175/366 (47%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + E + G V G + GR Sbjct: 42 KGRDTIGQQINVTCEVQQLLGNNRVRTVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 101 Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D ++ I P + F+TGI+V+D+ P G Sbjct: 102 IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG------D 212 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEE 217 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF + E+ Sbjct: 218 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 277 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 335 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + E + + + R++E +D Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGKEHYETAQRVKQTLQRYKELQD 395 Query: 389 IRLIGG 394 I I G Sbjct: 396 IITILG 401 >gi|34420414|gb|AAQ67449.1| ATP synthase beta [Drosophila melanogaster] Length = 379 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 87/252 (34%), Positives = 136/252 (53%), Gaps = 15/252 (5%) Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL---- 178 D + I ++ P + ++ TGI+V+D+ P G +IG+F G+G+GK+ L+ Sbjct: 12 DKTAAIHAEAPEFVQMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELI 71 Query: 179 SMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLKKSVVVVATSDESPILR 231 + A++ V VGER RE E IE L D K +V +E P R Sbjct: 72 NNVAKAHGGYSVFAG-VGERTREGNDLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGAR 130 Query: 232 KMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 LT +T+AEYF +G +VLL +D+I RF + E++ G +P A GY ++ +++ Sbjct: 131 ARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDM 190 Query: 291 PRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPP 350 + ERI + +KG+IT+V ++ V D+ DP + + LD VL+R++AE G YP Sbjct: 191 GSMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPA 248 Query: 351 VDPLASVSRLAD 362 VDPL S SR+ D Sbjct: 249 VDPLDSTSRIMD 260 >gi|62085186|gb|AAX62997.1| ATP synthase beta subunit [Pogonophora schomburgkiana] Length = 482 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D LG D + + + PA + + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRAAPAFIQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|150035723|gb|ABR67207.1| ATP synthase beta subunit [Phragmites australis] Length = 472 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 79 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 135 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 195 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 196 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 255 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 313 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 314 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 373 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 374 KELQDIIAILG 384 >gi|14718099|gb|AAK72789.1| ATP synthase beta subunit [Koeberlinia spinosa] Length = 480 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 206 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|16416732|gb|AAL18390.1|AF313542_1 ATP synthase beta chain [Equisetum telmateia] Length = 395 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 163/310 (52%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D ++G + + + I P M+ + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NMGPVEATTKSPIHKPAPAFMDLETKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESKVI 122 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 123 NEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 182 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 183 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 240 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R++ Sbjct: 241 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEVAQGVKQTLQRYK 299 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 300 ELQDIIAILG 309 >gi|28261724|ref|NP_783239.1| ATP synthase CF1 beta subunit [Atropa belladonna] gi|50400576|sp|Q8S8W8|ATPB_ATRBE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|20068338|emb|CAC88051.1| ATPase beta subunit [Atropa belladonna] Length = 498 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S M + + PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTMSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|126662937|ref|ZP_01733935.1| H(+)-transporting two-sector ATPase, beta subunit [Flavobacteria bacterium BAL38] gi|126624595|gb|EAZ95285.1| H(+)-transporting two-sector ATPase, beta subunit [Flavobacteria bacterium BAL38] Length = 503 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/330 (30%), Positives = 157/330 (47%), Gaps = 40/330 (12%) Query: 103 GRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G IDG L K G + I P + + TGI+VID+ P G Sbjct: 91 GRLFNVIGDAIDGLGDLPKAGANGLPIHRTAPKFEDLSTSSEVLFTGIKVIDLIEPYAKG 150 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIE------- 207 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE +E Sbjct: 151 GKIGLFGGAGVGKTVLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYG 210 Query: 208 -----------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF----- 245 D G K+ V +E P R L+ ++IAEYF Sbjct: 211 DDFMHSMENGGWDLSKVDMPGMRESKATFVFGQMNEPPGARARVALSGLSIAEYFRDGAG 270 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 S +G +VL +D+I RF + E++ G +P A GY ++ +E+ + ERI + +KG Sbjct: 271 SDQGKDVLFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKKG 328 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKA 364 +IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR L + Sbjct: 329 SITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSTSRILTPEI 388 Query: 365 WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + + ++ ++++ +DI I G Sbjct: 389 LGNEHYDCAQRVKEILQKYKQLQDIIAILG 418 >gi|68139363|gb|AAY86046.1| ATP synthase beta subunit [Cananga odorata] Length = 454 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 76 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 132 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 133 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESR 192 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF G +VLL +D+I RF Sbjct: 193 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQ 252 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 253 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 310 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + R+ Sbjct: 311 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 370 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 371 KELQDIIAILG 381 >gi|62085232|gb|AAX63018.1| ATP synthase beta subunit [Ruptiliocarpon caracolito] Length = 490 Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 161/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|288559959|ref|YP_003423445.1| A1A0 archaeal ATP synthase subunit B AhaB [Methanobrevibacter ruminantium M1] gi|288542669|gb|ADC46553.1| A1A0 archaeal ATP synthase subunit B AhaB [Methanobrevibacter ruminantium M1] Length = 461 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/307 (30%), Positives = 157/307 (51%), Gaps = 11/307 (3%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 +I S GR+ + GKPIDG + + ++I +R+ + +TGI ID Sbjct: 83 KIGVSKDMMGRIFDGTGKPIDGGPEIIP-EQELDINGNPMNPASREFPAEFIQTGISTID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIE 207 L GQ++ +F+GSG+ + L + AR SD VI + +G E F+ Sbjct: 142 GMNTLVRGQKLPIFSGSGLPHNDLAAQIARQAKVVGSDDDFAVIFAAMGITHEEANFFMR 201 Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHS 265 D+ L+K V + +D+ I R + P A+T AEY + + G +VL+IL ++ + + Sbjct: 202 DFERTGALEKVTVFMNLADDPAIERILTPKMALTTAEYMAFELGMHVLVILTDLSNYCEA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 +REI+ E+P RGYP ++++L + ER G ++G+IT + +++ D+ PI Sbjct: 262 LREISAARDEVPGRRGYPGYMYTDLAGIYERAGRIAGKEGSITQMPILVMPQDDITHPIP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRF 383 D I +G IVL+R + +G YPPVD L S+SRL D+ + S L + Sbjct: 322 DLTGYITEGQIVLSRDIHRKGIYPPVDVLPSLSRLMSGGIGGDKTRDDHSGVSDQLYSAY 381 Query: 384 EETRDIR 390 E R++R Sbjct: 382 AEGRNLR 388 >gi|209551224|ref|YP_002283141.1| F0F1 ATP synthase subunit beta [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226740665|sp|B5ZSN7|ATPB_RHILW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|209536980|gb|ACI56915.1| ATP synthase F1, beta subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 478 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/306 (30%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D L I P + + + TGI+V+D+ P G Sbjct: 93 LGRIMNVIGEPVDEAGPLVTAH-KRAIHQDAPSYVEQSTEAQILVTGIKVVDLLAPYARG 151 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK- 216 +IG+F G+G+GK+ L+ + A++ V VGER RE + + + N+ K Sbjct: 152 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESNVNKH 210 Query: 217 -------SVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 + +V +E P R LT +T+AE+F +G +VL +D+I RF + E+ Sbjct: 211 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAEHFRDQGQDVLFFVDNIFRFTQAGSEV 270 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + G+IT+V ++ V D+ DP + Sbjct: 271 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 328 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 329 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 388 Query: 389 IRLIGG 394 I I G Sbjct: 389 IIAILG 394 >gi|75332718|sp|Q95DR6|ATPB_AGAAF RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|16943654|emb|CAD10751.1| ATP synthase, beta subunit [Agapanthus africanus] Length = 498 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVSERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|282882839|ref|ZP_06291444.1| V-type ATP synthase beta chain 2 [Peptoniphilus lacrimalis 315-B] gi|281297250|gb|EFA89741.1| V-type ATP synthase beta chain 2 [Peptoniphilus lacrimalis 315-B] Length = 462 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 105/374 (28%), Positives = 183/374 (48%), Gaps = 21/374 (5%) Query: 36 VTCLSQYVCLGDFVVHQGKNSD--NLGQVIRI--NLDIVYICPVGIGEEISLGDLVFHWG 91 VT L Q V G+ V + K +D +G+V++I N +V + +G + L F Sbjct: 18 VTNLHQ-VSYGEVVKIKSKTTDETQVGEVVKIDDNKALVQVYGTNMGVSGNNTGLEFTGV 76 Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 F + S GRV N + KPID + G + P + R+ +TGI Sbjct: 77 PFEVPLSKEILGRVFNGIAKPIDRGGDIYSGKFYNVSGRPINP-VAREYPRNFIQTGISS 135 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DK-----VIISLVGERGREVRE 204 ID L GQ++ +F+GSG+ + L + R DK ++ + +G + E Sbjct: 136 IDGLMTLIRGQKLPIFSGSGLDHNQLAAQIVRQAKISGDKNENFAIVFAAIGVKHDEADF 195 Query: 205 FIEDYLGDNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRF 262 F E + + + VV+ + PI+ ++ P A+T AEY + + +VL+I+ IT + Sbjct: 196 FREAFKNAGVNERVVMYINYADDPIMERLITPKCALTAAEYLAYEENTHVLVIMTDITSY 255 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A ++RE+++ E+P +GYP ++S+L L ER G + G++T + + + D+ Sbjct: 256 AEALREVSSGREEVPSRKGYPGHLYSDLAALYERAGMIKGIDGSVTLIPILTMPSDDITH 315 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTH 378 PIAD I +G IVL+R L YPP++ L S+SRL + ++ ++ +S+ Sbjct: 316 PIADLTGYITEGQIVLSRDLQGSDIYPPINILPSLSRLMKDGIGEGYTREDHADLSA--Q 373 Query: 379 LIHRFEETRDIRLI 392 L + +D+R + Sbjct: 374 LFSSYSRVQDVRAL 387 >gi|44885376|dbj|BAD11931.1| ATP synthase beta subunit [Nitella moriokae] gi|44885378|dbj|BAD11932.1| ATP synthase beta subunit [Nitella moriokae] Length = 340 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|305671645|gb|ADM63132.1| ATP synthase beta subunit [Weigela hortensis] Length = 489 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + + VGER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFGGVGERTREGNDLYKEMKESG 212 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKRGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + D+ + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGDKHYQTAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|150035715|gb|ABR67203.1| ATP synthase beta subunit [Chasmanthium latifolium] Length = 422 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 39 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 95 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 96 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 156 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 215 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 273 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 274 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 333 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 334 KELQDIIAILG 344 >gi|164566071|gb|ABY61178.1| ATP synthase beta subunit [Danaea moritziana] Length = 394 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|19033069|gb|AAL83519.1|AF408791_1 ATP synthase beta subunit [Coleochaete sieminskiana] Length = 402 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + + + + PA + + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---ELGPVDTTKVSPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INSDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKKTLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|87043021|ref|YP_492635.1| ATP synthase F0 subunit 1 [Dictyostelium citrinum] gi|122110182|sp|Q2LCQ7|ATPAM_DICCI RecName: Full=ATP synthase subunit alpha, mitochondrial gi|84682121|gb|ABC60386.1| ATPase subunit 1 [Dictyostelium citrinum] Length = 519 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 117/424 (27%), Positives = 201/424 (47%), Gaps = 27/424 (6%) Query: 7 TLAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRIN 66 TL ++ Y K L ++ G + V+ LSQ + +G+ V GKN + +N Sbjct: 35 TLNNVSNKYGKVLFIKDGVVK--------VSGLSQ-IKIGEKVEFVGKNLFGMA----LN 81 Query: 67 LDIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG--K 121 L+ + V GE+ ++ G +V + F I GRV++ LG+PIDG L K Sbjct: 82 LEATSVGIVIFGEDTAIYEGVIVKRCEQNFAIKVDKTMLGRVVDVLGQPIDGLGELKDTK 141 Query: 122 GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 M + K P + R+ V + TG++++D P+ GQR + GKS + Sbjct: 142 TTRVMSVERKAPGIVTRKSVHESMLTGVKMVDALLPIGRGQRELIIGDRQTGKSAIAVDA 201 Query: 182 ARSDCFDKVIISL---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLT 237 + +K I+ + VG++ VR +E L+ ++VVV+T+ ++ L+ +AP T Sbjct: 202 ILNQQVNKDIVCIYVAVGQKKSTVRRLVEMLNTKGALEYTIVVVSTASDAAPLQFLAPYT 261 Query: 238 AVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERI 297 TI EYF +G + L++ D +++ A + R+++ P YP VF RLLER Sbjct: 262 GCTIGEYFRDEGKHALIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERA 321 Query: 298 GPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLA 355 ++ G++TA V + + I ++ SI DG I L + L +G P V+ Sbjct: 322 AKLNEKYGCGSLTAFPIVETQAGDVSAYIPTNIISITDGQIFLEKELFNKGIRPAVNVGL 381 Query: 356 SVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYD 415 SVSR+ A SA KKL +L + ++ R++ + D + + + + + + Sbjct: 382 SVSRVGSAAQSAVMKKLAGALKLELAQY---RELARFEQFSSNADAVTTQILKKGKLTIE 438 Query: 416 FLKQ 419 LKQ Sbjct: 439 LLKQ 442 >gi|323148837|ref|YP_004221930.1| ATP synthase CF1 beta subunit [Erodium carvifolium] gi|316926301|gb|ADU58154.1| ATP synthase CF1 beta subunit [Erodium carvifolium] Length = 498 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPDFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 220 GVINEQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R Sbjct: 338 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|281190731|ref|YP_003330968.1| ATP synthase CF1 beta subunit [Parthenium argentatum] gi|269924844|gb|ACZ52717.1| ATP synthase CF1 beta subunit [Parthenium argentatum] Length = 498 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G D++ + GR Sbjct: 50 KGRDTVGQSINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D S I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + DE + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|260576484|ref|ZP_05844474.1| ATP synthase F1, beta subunit [Rhodobacter sp. SW2] gi|259021367|gb|EEW24673.1| ATP synthase F1, beta subunit [Rhodobacter sp. SW2] Length = 476 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR++N +G+P+D + + + + PA + Q E TGI+VID+ P Sbjct: 86 ATLGRILNVIGEPVDEKGPVNATE--YRAIHQPAPAFSEQATESLILVTGIKVIDLLAPY 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV-----IISLVGERGREVREFIEDYLG-- 211 G +IG+F G+G+GK+ L+ + KV + + VGER RE + + + Sbjct: 144 SKGGKIGLFGGAGVGKTVLIMELINN--IAKVHSGYSVFAGVGERTREGNDLYHEMIESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264 DNL +S V V +E P R L+ +T+AE F + G +VL +D+I RF Sbjct: 202 VINIDNLAESKVALVYGQMNEPPGARLRVALSGLTLAEQFRDQSGTDVLFFVDNIFRFTQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +++ L ERI + + G+IT+V ++ V D+ DP Sbjct: 262 AGSEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKAGSITSVQAIYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R+++E G YP VDPL S SR+ D E + ++ ++ R+ Sbjct: 320 PATSFAHLDATTVLSRAISELGIYPAVDPLDSTSRILDPVVVGVEHYETARAVQGVLQRY 379 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 380 KSLQDIIAILG 390 >gi|110915580|gb|ABH02578.1| ATP synthase beta subunit [Aniselytron treutleri] Length = 490 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY + +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSXLLGRMPXAXGYQPTFSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAIXG 401 >gi|325297375|ref|YP_004257292.1| ATP synthase subunit beta [Bacteroides salanitronis DSM 18170] gi|324316928|gb|ADY34819.1| ATP synthase subunit beta [Bacteroides salanitronis DSM 18170] Length = 509 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/327 (30%), Positives = 162/327 (49%), Gaps = 45/327 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N +G IDG L K + I + P + ++ TGI+VID+ P G Sbjct: 96 GRVMNVVGDAIDGMKELDKAE-GFPIHREPPKFEDLATSQEVLFTGIKVIDLLEPYLKGG 154 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 155 KIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 212 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSK- 248 GD KS+ +V +E P R+ L+ +T+AE F + Sbjct: 213 GDEFLKSMEEGNWDLSKVDYKEVEKSQVSMVFGQMNEPPGARQSVALSGLTLAESFRDRD 272 Query: 249 -GDN----VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 G+N +L +D+I RF + E++ G +P A GY ++ +E+ ++ ERI + + Sbjct: 273 TGENGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TSTK 330 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + + LD VL+R +AE G YP VDPL S SR+ D Sbjct: 331 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKIAELGIYPAVDPLDSTSRILDP 390 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389 E + ++ R +E +DI Sbjct: 391 LVVGKEHYDTAQRVKQILQRNKELQDI 417 >gi|164566133|gb|ABY61209.1| ATP synthase beta subunit [Danaea simplicifolia] gi|164566137|gb|ABY61211.1| ATP synthase beta subunit [Danaea simplicifolia] Length = 394 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|157689150|gb|ABV65131.1| ATP synthase CF1 beta subunit [Bulnesia arborea] Length = 491 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GVTLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINETNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQQVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|323715494|gb|ADY04815.1| ATP synthase beta subunit [Schizophragma hydrangeoides] Length = 483 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ TP Sbjct: 93 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLTPY 151 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 211 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 212 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 271 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 329 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 330 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 389 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 390 LQDIIAILG 398 >gi|262340861|ref|YP_003283716.1| ATP synthase F1 subunit beta [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272198|gb|ACY40106.1| ATP synthase F1 subunit beta [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 501 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 105/334 (31%), Positives = 156/334 (46%), Gaps = 49/334 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GRV N LG IDG GD+ I + PPA E TGI+VID+ P Sbjct: 93 GRVFNVLGNCIDG-----LGDIDRSITRPIHSEPPAFKDLSTETEILYTGIKVIDLIEPY 147 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFD---KVIISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L+ + + + + VGER RE +RE +E + Sbjct: 148 PKGGKIGLFGGAGVGKTVLIQELINNVAKGHGGRSVFAGVGERSREGNDLLREMLESGII 207 Query: 211 --GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-- 245 GD+ KS+ V +E P R L+ +T+AEY+ Sbjct: 208 KYGDSFMKSMRKGYWDISKIDKEALKESKAAFVFGQMNEPPGARARVALSGLTLAEYYRD 267 Query: 246 ----SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 KG +VL +D+I RF + E++ G +P + GY ++ SE+ + ERI + Sbjct: 268 QYVEGKKGQDVLFFIDNIFRFTQAGSEVSALLGRIPSSVGYQPTLSSEMGSMQERI--TS 325 Query: 302 KEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-L 360 +KG+IT+V +V V D+ DP S LD VL+R +A G YP VDPL S SR L Sbjct: 326 TKKGSITSVQAVYVPADDLTDPAPSITFSHLDATTVLSRKIASLGIYPAVDPLDSTSRIL 385 Query: 361 ADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 + D + ++ ++ +DI I G Sbjct: 386 SPDIIDKDHYNCAQRVKEILQKYNSLQDIIAILG 419 >gi|20467361|gb|AAL27811.1| ATPase beta subunit [Ephedra gerardiana] Length = 429 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 158/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 67 LGRIFNVLGEPVD---DLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 123 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + + Sbjct: 124 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVI 182 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 183 NEKNIIXSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 242 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 243 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 300 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + ++ ++ + + R++E Sbjct: 301 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMXQPRIVGEKHYEIAQEVKQTLQRYKE 360 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 361 LQDIIAILG 369 >gi|21684891|emb|CAD11572.1| ATP synthase beta subunit [Paepalanthus fasciculatus] Length = 485 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG PID +LG D S I P + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGDPID---NLGPVDSSATSPIHRSAPAFIQLDTRLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 215 VINENNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGNEHYEIAQRVKQTLQRY 392 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 393 KELQDIIAILG 403 >gi|70607285|ref|YP_256155.1| V-type ATP synthase subunit B [Sulfolobus acidocaldarius DSM 639] gi|68567933|gb|AAY80862.1| V-type ATP synthase beta chain [Sulfolobus acidocaldarius DSM 639] Length = 452 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 93/307 (30%), Positives = 161/307 (52%), Gaps = 19/307 (6%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S GR+ LG+P+D + G+ S + P++ R+ E+ +TG+ ID T Sbjct: 73 SEEMLGRIFTPLGEPLDNGPQVLSGEKRDINGSPLNPSV-REYPEEFIQTGVSAIDGLTS 131 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIED 208 L GQ++ +F+GSG+ + L + A+ V+ + +G R E R F E+ Sbjct: 132 LLRGQKLPIFSGSGLPANQLAAQIAKQATVRGEESNFAVVFAAIGIRYDEALFFRRFFEE 191 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 N + + V +++ P L+ + P TA+T+AEY + + D ++L IL +T + ++R Sbjct: 192 TGAIN--RVAMFVTLANDPPSLKILTPKTALTLAEYLAYEKDMHILAILIDMTNYCEALR 249 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + E+P GYP ++++L ER G +KG+IT + + + D+ PI D Sbjct: 250 ELSASKEEVPGRGGYPGYMYTDLAVTYERAGKVRGKKGSITQMPILTMPNDDITHPIPDL 309 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLA----DKAWSADEKKLVSSLTHLIHRF 383 I +G IVL+RSL +G YPP++ LAS+SRL + + D+ K +S+ L + Sbjct: 310 TGYITEGQIVLDRSLFNKGIYPPINVLASLSRLMRDGIGEGKTRDDHKDLSN--QLFAAY 367 Query: 384 EETRDIR 390 +DIR Sbjct: 368 ARAQDIR 374 >gi|256751891|ref|ZP_05492762.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermoanaerobacter ethanolicus CCSD1] gi|256749196|gb|EEU62229.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermoanaerobacter ethanolicus CCSD1] Length = 459 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/365 (28%), Positives = 174/365 (47%), Gaps = 26/365 (7%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 + G GQV+ +N D +V + G I+ + F + S GRV + Sbjct: 32 IETGTGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSIDMLGRVFD 91 Query: 108 ALGKPIDGDDSLGKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 LG+P D KG + ++I R + +TGI ID L GQ Sbjct: 92 GLGRPRD------KGPMIIPEKRLDINGNPINPTARDYPSEFIQTGISAIDGLNTLVRGQ 145 Query: 163 RIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 ++ +F+GSG+ + L + AR SD V+ + +G E FI D+ + Sbjct: 146 KLPIFSGSGLPHAQLAAQIARQAKVLGSDSKFAVVFAAMGITFEEADYFISDFRRTGAID 205 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSG 274 +SV+ + +++ I R P A+T AE+ + K +VL+I+ +T + ++RE++ Sbjct: 206 RSVLFINLANDPAIERIATPRMALTCAEFLAYEKEMHVLVIMTDMTNYCEALREVSAARK 265 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E+P RGYP ++++L + ER G + KG+IT + + + D+ PI D I +G Sbjct: 266 EVPGRRGYPGYLYTDLATIYERAGRIKGRKGSITQIPILTMPEDDKTHPIPDLTGYITEG 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDI 389 I+L+R L +G YPP+D L S+SRL DK D L++ L R ++ +++ Sbjct: 326 QIILSRDLYRKGIYPPIDVLPSLSRLKDKGIGQGKTREDHADLMNQLFASYARGKQAKEL 385 Query: 390 RLIGG 394 +I G Sbjct: 386 AVILG 390 >gi|292490912|ref|YP_003526351.1| H(+)-transporting two-sector ATPase [Nitrosococcus halophilus Nc4] gi|291579507|gb|ADE13964.1| H(+)-transporting two-sector ATPase [Nitrosococcus halophilus Nc4] Length = 475 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 104/333 (31%), Positives = 165/333 (49%), Gaps = 22/333 (6%) Query: 44 CLGDFVV---HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP--- 97 G+ VV HQG+ + GQVI + V V I E DL W RF P Sbjct: 26 AFGERVVVKDHQGRRRN--GQVILTSDKGVL---VQIFEGTDDLDLERTWVRFLEEPFEI 80 Query: 98 --SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 S GR+ + +G P D + L + + R ++ +TGI ID Sbjct: 81 PLSPDVLGRIFDGVGAPRDNRPPI-VAPLKRNVNGAPANPVARAYPQEFIQTGISTIDGL 139 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDY 209 L GQ++ +F+GSG+ + L + R + V+ + +G + R F E++ Sbjct: 140 NSLVRGQKLPIFSGSGLPHNRLAAQIVRQAKLLGEETRFVVVFAAMGVTYGDARFFQEEF 199 Query: 210 LGDNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 + +VV+ + +D+ PI R + P TA+T AEY + + D +VL+++ +T +A ++R Sbjct: 200 ESSGVLGNVVMYLNLADDPPIKRLILPRTALTCAEYLAFEQDLHVLVVMTDMTHYAEALR 259 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E+AT G++P +GYP ++S+L + ER G + G+IT V V + D+ PI D Sbjct: 260 EVATAKGDVPSRKGYPGYLYSDLAEIYERAGRIKNRHGSITMVPVVSMPSDDITHPIPDL 319 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 I +G IVL+R L +G YPPV S+SRL Sbjct: 320 TGYITEGQIVLSRELYHQGIYPPVSIPPSLSRL 352 >gi|257066504|ref|YP_003152760.1| H+transporting two-sector ATPase alpha/beta subunit central region [Anaerococcus prevotii DSM 20548] gi|256798384|gb|ACV29039.1| H+transporting two-sector ATPase alpha/beta subunit central region [Anaerococcus prevotii DSM 20548] Length = 582 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 82/279 (29%), Positives = 146/279 (52%), Gaps = 18/279 (6%) Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 P M +EK F+TG RV+D+F PL G + + G G GK+ L A+ D +I Sbjct: 195 PVMANMPIEKLFETGQRVLDVFFPLAKGGTVAIPGGFGTGKTMLQHQLAQYSDVDIIIYI 254 Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245 GERG E+ + +E++ G L + +++A + P+ + A + T +T+AEYF Sbjct: 255 GCGERGNEMTQVLEEFPDLIDPNTGKGLMERTILIANTSNMPVAAREASIYTGITMAEYF 314 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--- 302 G +V L+ DS +R+A ++REI+ E+P GYP + S L + ER G + Sbjct: 315 RDMGYDVALMADSSSRWAEALREISGRLEEIPAEEGYPAYLGSRLSQFYERAGYFKNLNG 374 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +G++T + +V G + ++P+ ++ R ++ + L+R LA YP ++ L+S S + Sbjct: 375 SEGSVTLIGAVSPSGGDFSEPVTENTRRCVNVFLGLDRKLAYSRHYPAINWLSSYSNYIE 434 Query: 363 KAWSADEKKL-------VSSLTHLIHRFEETRDIRLIGG 394 K + E++L + L +++ +E R I ++ G Sbjct: 435 KIRAYYEERLGKDIIAIRNELMNVLLEEDEVRSIMMLVG 473 >gi|18860318|ref|NP_569636.1| ATP synthase CF1 beta subunit [Psilotum nudum] gi|20141186|sp|O03081|ATPB_PSINU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|18389471|dbj|BAB84223.1| ATP synthase beta subunit [Psilotum nudum] Length = 492 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D I P F+TGI+V+D+ P Sbjct: 103 ATLGRIFNVLGEPVD---NLGPINADKKSSIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 159 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESK 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL +S V V +E P R LTA+TIAEYF +VLL +D+I RF Sbjct: 219 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 395 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 396 YKELQDIIAILG 407 >gi|313183924|ref|YP_004021778.1| ATP synthase CF1 beta subunit [Equisetum arvense] gi|281371644|gb|ADA63577.1| ATP synthase CF1 beta subunit [Equisetum arvense] Length = 489 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 162/310 (52%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D ++G + + + I P M + F+TGI+V+D+ P Sbjct: 101 LGRIFNVLGEPVD---NMGPVEATTKSPIHKPAPAFMELETKLSIFETGIKVVDLLAPYR 157 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 158 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESKVI 216 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 217 NEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 276 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 277 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 334 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R++ Sbjct: 335 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEVAQGVKQTLQRYK 393 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 394 ELQDIIAILG 403 >gi|167769512|ref|ZP_02441565.1| hypothetical protein ANACOL_00846 [Anaerotruncus colihominis DSM 17241] gi|167668480|gb|EDS12610.1| hypothetical protein ANACOL_00846 [Anaerotruncus colihominis DSM 17241] Length = 458 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 90/304 (29%), Positives = 156/304 (51%), Gaps = 13/304 (4%) Query: 98 SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S RV + LG+PIDG + L + L++ + P A R ++ +TG+ ID Sbjct: 82 SEDMLSRVFDGLGRPIDGGPEILPEKRLNINGLPMNPAA--RNYPQEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ +F+ SG+ + L + AR +D V+ + +G E F + + Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTDEPFAVVFAAMGITFEEANFFTDSFR 199 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268 L +S++ + +++ + R P A+T AEY + K +VL+IL IT +A ++RE Sbjct: 200 ETGALDRSIMFINLANDPAVERIATPKMALTAAEYLAFDKNMHVLVILTDITNYADALRE 259 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I+ E+P RGYP ++++L L ER G + + G+IT + + + D+ PI D Sbjct: 260 ISAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKNGSITLIPILTMPEDDKTHPIPDLT 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEET 386 I +G I+L+R L +G PP+D L S+SRL DK A + + +++ L + Sbjct: 320 GYITEGQIILSRELYRKGIAPPIDVLPSLSRLKDKGIGAGKTRADHANTMNQLFAAYSRG 379 Query: 387 RDIR 390 +D + Sbjct: 380 KDAK 383 >gi|256828748|ref|YP_003157476.1| alternate F1F0 ATPase, F1 subunit alpha [Desulfomicrobium baculatum DSM 4028] gi|256577924|gb|ACU89060.1| alternate F1F0 ATPase, F1 subunit alpha [Desulfomicrobium baculatum DSM 4028] Length = 585 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 107/386 (27%), Positives = 187/386 (48%), Gaps = 14/386 (3%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLG--DFVVHQGKNSDNLGQVIRI 65 ++ + E ++ L ++ + +ITSV + +S +G + V+ G D G + Sbjct: 17 ISHVRETFTPQLTLR--EVGTITSVATGIAKVSGLPGVGYDELVMFPG---DVPGIAFNV 71 Query: 66 NLDIVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDL 124 + D + + +G + GD V GR ++ GRVI+ LG+P+DG+ + G+ Sbjct: 72 DEDEIGVVLLGEYWHLQAGDEVRRTGRVMDVAVGDSLLGRVIDPLGRPLDGNGPVA-GNR 130 Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL--SMFA 182 + + PP M+R V + +TG++VID P+ GQR + GK+ + ++ Sbjct: 131 RLPVERTAPPIMDRSPVTEPLQTGLKVIDALIPVGRGQRELILGDRQTGKTAIAMDTILN 190 Query: 183 RSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTI 241 + D + +G+R V + + + ++ +V+VV ++ P L +AP A +I Sbjct: 191 QRDQDVLCVYCAIGQRASAVAKAVATLQKNGAMEYTVIVVTEGNDPPGLAYIAPYAATSI 250 Query: 242 AEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSE 301 AEYF G +VL++ D +T A + RE++ P +P +F RLLER Sbjct: 251 AEYFMEAGRDVLIVYDDLTHHARAYRELSLLLRRPPGREAFPGDIFYIHSRLLERATHLR 310 Query: 302 KEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 +E G++TA+ + + + + I ++ SI DG I L+ SL E G P VD SVSR Sbjct: 311 EEAGGGSLTALPVIETEAQDISAYIPTNLISITDGQIYLSPSLFELGVLPAVDVGKSVSR 370 Query: 360 LADKAWSADEKKLVSSLTHLIHRFEE 385 + KA A + + L +FEE Sbjct: 371 VGGKAQRAAYRAVAGDLKLAYAQFEE 396 >gi|113910826|gb|ABI48145.1| ATPase beta subunit [Pellia epiphylla] Length = 464 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 160/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 78 GRIFNVLGEPVD---NLGPVDANTTFPIHRCAPAFTQLDTKLSIFETGIKVVDLLAPYRR 134 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 194 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 195 QNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 254 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 255 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 312 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 313 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 371 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 372 QDIIAILG 379 >gi|6706178|emb|CAB65908.1| ATP synthase beta subunit [Gerbera jamesonii] Length = 490 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQQVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|6017787|gb|AAF01628.1| ATP synthase beta subunit [Geranium cinereum] Length = 489 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/305 (32%), Positives = 153/305 (50%), Gaps = 18/305 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+PID S I P + F+TGI+V+D+ P Sbjct: 95 GATLGRIFNVLGEPIDNXXXXXXXTXS-PIHRSAPDFIQLDTKLSIFETGIKVVDLLAPY 153 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E + Sbjct: 154 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGV 212 Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 ++ K K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 213 INDQKIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 272 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 GSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 330 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S L + A+ + + + R++ Sbjct: 331 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGAEHYETAQRVKQTLQRYK 390 Query: 385 ETRDI 389 E +DI Sbjct: 391 ELQDI 395 >gi|62902839|gb|AAY19334.1| ATP synthase beta subunit [Quetzalia occidentalis] Length = 480 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 87 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHKSAPAFIQLDTKLSIFETGIKVVDLLAPY 145 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 205 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 206 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 265 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 266 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPA 323 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 324 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 383 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 384 LQDIIAILG 392 >gi|6724285|gb|AAB51730.2| ATP synthase beta chain [Psilotum nudum] Length = 460 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D I P F+TGI+V+D+ P Sbjct: 71 ATLGRIFNVLGEPVD---NLGPINADKKSSIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 127 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 128 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESK 186 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL +S V V +E P R LTA+TIAEYF +VLL +D+I RF Sbjct: 187 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 246 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 247 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 304 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 305 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 363 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 364 YKELQDIIAILG 375 >gi|18310619|ref|NP_562553.1| V-type ATP synthase subunit B [Clostridium perfringens str. 13] gi|110799637|ref|YP_696322.1| V-type ATP synthase subunit B [Clostridium perfringens ATCC 13124] gi|110801886|ref|YP_698924.1| V-type ATP synthase subunit B [Clostridium perfringens SM101] gi|168207147|ref|ZP_02633152.1| V-type ATPase, B subunit [Clostridium perfringens E str. JGS1987] gi|168209292|ref|ZP_02634917.1| V-type ATPase, B subunit [Clostridium perfringens B str. ATCC 3626] gi|168213606|ref|ZP_02639231.1| V-type ATPase, B subunit [Clostridium perfringens CPE str. F4969] gi|168216922|ref|ZP_02642547.1| V-type ATPase, B subunit [Clostridium perfringens NCTC 8239] gi|169342879|ref|ZP_02863910.1| V-type ATPase, B subunit [Clostridium perfringens C str. JGS1495] gi|81767023|sp|Q8XJW6|VATB_CLOPE RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|122956653|sp|Q0SSI3|VATB_CLOPS RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|122958833|sp|Q0TPW8|VATB_CLOP1 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|18145300|dbj|BAB81343.1| V-type sodium ATP synthase subunit B [Clostridium perfringens str. 13] gi|110674284|gb|ABG83271.1| V-type ATPase, B subunit [Clostridium perfringens ATCC 13124] gi|110682387|gb|ABG85757.1| V-type ATPase, B subunit [Clostridium perfringens SM101] gi|169299136|gb|EDS81208.1| V-type ATPase, B subunit [Clostridium perfringens C str. JGS1495] gi|170661480|gb|EDT14163.1| V-type ATPase, B subunit [Clostridium perfringens E str. JGS1987] gi|170712527|gb|EDT24709.1| V-type ATPase, B subunit [Clostridium perfringens B str. ATCC 3626] gi|170714960|gb|EDT27142.1| V-type ATPase, B subunit [Clostridium perfringens CPE str. F4969] gi|182380961|gb|EDT78440.1| V-type ATPase, B subunit [Clostridium perfringens NCTC 8239] Length = 460 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/318 (29%), Positives = 161/318 (50%), Gaps = 17/318 (5%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+V+ +N D +V + G + + F I S GRV + +G+P D Sbjct: 42 GKVLEVNGDKAMVQLFEGSAGINLKNTKVRFLGRPLEIGVSEDMLGRVFDGMGRPKDNGP 101 Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 ++ + D++ E ++ V R + +TGI ID L GQ++ VF+GSG+ Sbjct: 102 NIIPEKRLDINGEAINPVA----RNYPSEFIQTGISAIDGLNTLVRGQKLPVFSGSGLPH 157 Query: 175 STLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 L + AR SD V+ + +G E F++++ + +SV+ + + + Sbjct: 158 KELAAQIARQAKVLNSDSKFAVVFAAIGITFEEAEFFVDEFTKTGAIDRSVLFMNLASDP 217 Query: 228 PILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 I R P A+T AEY + KG +VL+I+ IT + ++RE++ E+P RGYP + Sbjct: 218 AIERIATPRMALTTAEYLAYEKGMHVLVIMTDITNYCEALREVSAARKEVPGRRGYPGYL 277 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L L ER G ++G+IT + + + D+ PI D I +G I+L+R L ++G Sbjct: 278 YTDLSTLYERAGRLVGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRELYKKG 337 Query: 347 RYPPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 338 IMPPIDVLPSLSRLKDKG 355 >gi|312210461|emb|CBX90548.1| similar to mitochondrial ATP synthase beta subunit [Leptosphaeria maculans] Length = 519 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 152/308 (49%), Gaps = 24/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N G PID +G + + + PPA Q + TGI+V+D+ P Sbjct: 132 GRIMNVTGDPIDE-----RGPIKATKYAPIHADPPAFTEQATSAEVLVTGIKVVDLLAPY 186 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--- 211 G +IG+F G+G+GK+ L++ A++ V VGER RE + + Sbjct: 187 ARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGFSVFTG-VGERTREGNDLYHEMQETSV 245 Query: 212 ---DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D K +V +E P R LT +T+ EYF G +VLL +D+I RF + Sbjct: 246 IQLDGESKVALVFGQMNEPPGARARVALTGLTLCEYFRDVDGQDVLLFIDNIFRFTQAGS 305 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ ++ + ERI + KG+IT+V +V V D+ DP + Sbjct: 306 EVSALLGRIPSAVGYQPTLAIDMGLMQERI--TTTSKGSITSVQAVYVPADDLTDPAPAT 363 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R ++E G YP VDPL S SR+ D + D + + ++ ++ Sbjct: 364 TFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRVIGDDHYNTATKVQQILQEYKSL 423 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 424 QDIIAILG 431 >gi|113910846|gb|ABI48155.1| ATPase beta subunit [Atrichum angustatum] Length = 472 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S P PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|108773137|ref|YP_635646.1| ATP synthase CF1 beta subunit [Solanum tuberosum] gi|118573751|sp|Q2VEH0|ATPB_SOLTU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|82754634|gb|ABB90048.1| ATP synthase CF1 beta chain [Solanum tuberosum] gi|88656811|gb|ABD47064.1| ATP synthase CF1 beta subunit [Solanum tuberosum] Length = 498 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 111/370 (30%), Positives = 180/370 (48%), Gaps = 31/370 (8%) Query: 49 VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99 +V QG+ D++GQ I + ++ V + + ++ G V G R+ Sbjct: 47 LVVQGR--DSVGQPINVACEVQQLLGNNRVRAVAMSATDGLTRGMAVIDTGAPIRVPVGG 104 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|227786|prf||1711264A CF1 ATPase:SUBUNIT=beta Length = 498 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|113910782|gb|ABI48123.1| ATPase beta subunit [Bazzania trilobata] Length = 472 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 161/312 (51%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 140 YRRGGKIGSFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 198 Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + D N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF Sbjct: 199 VIDEQNISESKVALVYGQMNEPPGARMRVGLTASTMAEYFRDINKQDVLLFIDNIFRFVQ 258 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 376 YKELQDIIAISG 387 >gi|94502498|ref|YP_588124.1| ATP synthase CF1 beta subunit [Helianthus annuus] gi|118573542|sp|Q1KXV2|ATPB_HELAN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|88656902|gb|ABD47153.1| ATP synthase CF1 beta subunit [Helianthus annuus] Length = 498 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G D++ + GR Sbjct: 50 KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D S I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + DE + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|55957071|emb|CAB64751.2| ATP synthase beta subunit [Zabelia triflora] Length = 403 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 152/306 (49%), Gaps = 22/306 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTXTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + BVLL +D+I RF Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQBVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTTKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + DE + + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGDEHYETAQRVKQTLQR 397 Query: 383 FEETRD 388 ++E +D Sbjct: 398 YKELQD 403 >gi|167038637|ref|YP_001666215.1| V-type ATP synthase subunit B [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320117029|ref|YP_004187188.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|238687684|sp|B0K8E7|VATB_THEP3 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|166857471|gb|ABY95879.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319930120|gb|ADV80805.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 459 Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 102/365 (27%), Positives = 175/365 (47%), Gaps = 26/365 (7%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 + G GQV+ +N D +V + G I+ + F + S GRV + Sbjct: 32 IETGTGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSIDMLGRVFD 91 Query: 108 ALGKPIDGDDSLGKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 LG+P D KG + ++I R + +TGI ID L GQ Sbjct: 92 GLGRPRD------KGPMIIPEKRLDINGNPINPTARDYPSEFIQTGISAIDGLNTLVRGQ 145 Query: 163 RIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 ++ +F+GSG+ + L + AR SD V+ + +G E FI D+ + Sbjct: 146 KLPIFSGSGLPHAQLAAQIARQAKVLGSDSKFAVVFAAMGITFEEADYFISDFRRTGAID 205 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSG 274 +SV+ + +++ I R P A+T AE+ + + + +VL+I+ +T + ++RE++ Sbjct: 206 RSVLFINLANDPAIERIATPRMALTCAEFLAYEKEMHVLVIMTDMTNYCEALREVSAARK 265 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E+P RGYP ++++L + ER G + KG+IT + + + D+ PI D I +G Sbjct: 266 EVPGRRGYPGYLYTDLATIYERAGRIKGRKGSITQIPILTMPEDDKTHPIPDLTGYITEG 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDI 389 I+L+R L +G YPP+D L S+SRL DK D L++ L R ++ +++ Sbjct: 326 QIILSRDLYRKGIYPPIDVLPSLSRLKDKGIGQGKTREDHADLMNQLFASYARGKQAKEL 385 Query: 390 RLIGG 394 +I G Sbjct: 386 AVILG 390 >gi|300814096|ref|ZP_07094379.1| ATP synthase ab C-terminal domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511753|gb|EFK38970.1| ATP synthase ab C-terminal domain protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 462 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 105/374 (28%), Positives = 183/374 (48%), Gaps = 21/374 (5%) Query: 36 VTCLSQYVCLGDFVVHQGKNSD--NLGQVIRI--NLDIVYICPVGIGEEISLGDLVFHWG 91 VT L Q V G+ V + K +D +G+V++I N +V + +G + L F Sbjct: 18 VTNLHQ-VSYGEVVKIKSKTTDETQVGEVVKIDDNRALVQVYGTNMGVSGNNTGLEFTGV 76 Query: 92 RFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 F + S GRV N + KPID + G + P + R+ +TGI Sbjct: 77 PFEVPLSKEILGRVFNGIAKPIDRGGDIYSGKFYNVSGRPINP-VAREYPRNFIQTGISS 135 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCF--DK-----VIISLVGERGREVRE 204 ID L GQ++ +F+GSG+ + L + R DK ++ + +G + E Sbjct: 136 IDGLMTLIRGQKLPIFSGSGLDHNQLAAQIVRQAKISGDKNENFAIVFAAIGVKHDEADF 195 Query: 205 FIEDYLGDNLKKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRF 262 F E + + + VV+ + PI+ ++ P A+T AEY + + +VL+I+ IT + Sbjct: 196 FREAFKNAGVNERVVMYINYADDPIMERLITPKCALTAAEYLAYEENTHVLVIMTDITSY 255 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A ++RE+++ E+P +GYP ++S+L L ER G + G++T + + + D+ Sbjct: 256 AEALREVSSGREEVPSRKGYPGHLYSDLAALYERAGMIKGIDGSVTLIPILTMPSDDITH 315 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTH 378 PIAD I +G IVL+R L YPP++ L S+SRL + ++ ++ +S+ Sbjct: 316 PIADLTGYITEGQIVLSRDLQGSDIYPPINILPSLSRLMKDGIGEGYTREDHADLSA--Q 373 Query: 379 LIHRFEETRDIRLI 392 L + +D+R + Sbjct: 374 LFSSYSRVQDVRAL 387 >gi|169837580|ref|ZP_02870768.1| V-type ATP synthase subunit B [candidate division TM7 single-cell isolate TM7a] Length = 444 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 164/333 (49%), Gaps = 11/333 (3%) Query: 42 YVCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD-LVFHWGR-FRISPSA 99 + CL + K G+V+ +N D + I+L D V GR + S Sbjct: 4 FACLRLVEIETQKGELRRGRVLEVNGDKAVVQLFENSAGINLKDSKVRFLGRPLSLGVSE 63 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GRV + LG+P D + + +++I + R + +TG+ ID L Sbjct: 64 DMIGRVFDGLGRPKDNGPKIIP-EKTLDINGTAINPVARDYPSEFIQTGVSAIDGLNTLV 122 Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN 213 GQ++ +F+GSG+ + L AR +D V+ +G E + F ED++ Sbjct: 123 RGQKLPIFSGSGLPHAELALQIARQAKVLGTDSKFAVVFGAIGITFEEAQTFTEDFIKTG 182 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIAT 271 + ++V+ + +++ I R P A+T AEY + KG +VL+IL +T + ++RE++ Sbjct: 183 AIDRAVLFMNLANDPAIERLSTPKMALTCAEYLAFEKGMHVLVILTDLTNYCEALREVSA 242 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 E+P RGYP ++++L + ER G + +G+IT + + + D+ PI D I Sbjct: 243 ARKEVPGRRGYPGYLYTDLSTIYERAGRIKGREGSITQIPILTMPEDDKTHPIPDLTGYI 302 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 +G I+L+R L ++ PP+D L S+SRL DK Sbjct: 303 TEGQIILSRDLYKQNLMPPIDVLPSLSRLKDKG 335 >gi|62902845|gb|AAY19337.1| ATP synthase beta subunit [Tripterococcus brunonis] Length = 488 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 158/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ P Sbjct: 96 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKFSIFETGIKVVDLLAP 152 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 213 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 330 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 390 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 391 ELQDIIAILG 400 >gi|319441099|ref|ZP_07990255.1| F0F1 ATP synthase subunit beta [Corynebacterium variabile DSM 44702] Length = 476 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 95/298 (31%), Positives = 157/298 (52%), Gaps = 9/298 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 G V NALG +D + LG+ I P + + +TGI+VID+ TP G Sbjct: 98 GHVFNALGDCLD-EPGLGRDGEQWGIHRDAPAFDQLEGRTELMETGIKVIDLLTPYVKGG 156 Query: 163 RIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVREF-IEDYLGDNLKKSV 218 +IG+F G+G+GK+ L+ M R + + + VGER RE + +E L+ + Sbjct: 157 KIGLFGGAGVGKTVLIQEMITRIAREFSGTSVFAGVGERTREGTDLRLEMEEMGVLQDTA 216 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGELP 277 +V DE P +R L+ +T+AEYF + +VLL +D+I RF + E++T G +P Sbjct: 217 LVFGQMDEPPGVRMRVALSGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMP 276 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI ++ +IT++ +V V D++ DP + + LD Sbjct: 277 SAVGYQPTLADEMGVLQERITSTKGR--SITSLQAVYVPADDYTDPAPATTFAHLDATTE 334 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLIGG 394 L+R++A +G YP V+PL S SR+ + + V+ + ++ + +E +DI I G Sbjct: 335 LDRAIASKGIYPAVNPLTSTSRILEPGIVGERHYAVAQRVIGILQKNKELQDIIAILG 392 >gi|228016323|gb|ACP51157.1| ATP synthase CF1 beta subunit [Pinus taeda] Length = 492 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 103/319 (32%), Positives = 163/319 (51%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDAGITSAIHRPAPAFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + D VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|113910818|gb|ABI48141.1| ATPase beta subunit [Leucolejeunea clypeata] Length = 468 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 157/312 (50%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D S+ + + I P F+TGI+V+D+ P Sbjct: 81 ATLGRIFNVLGEPVDNLGSV-EASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 139 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 140 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 198 Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 E+ + D+ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 NEESISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 256 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 314 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 315 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 373 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 374 YKELQDIIAILG 385 >gi|56675900|emb|CAB90089.2| ATP synthase beta subunit [Hymenanthera alpina] Length = 486 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFVQLETKLLIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYEIAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|184200630|ref|YP_001854837.1| F0F1 ATP synthase subunit beta [Kocuria rhizophila DC2201] gi|183580860|dbj|BAG29331.1| ATP synthase beta chain [Kocuria rhizophila DC2201] Length = 488 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 95/302 (31%), Positives = 155/302 (51%), Gaps = 16/302 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME----IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 G + N LG +D L +L ++ I K P + + +TGI+ ID+ TP Sbjct: 105 GHIFNVLGDALD----LPTDELDIQERWPIHRKAPSFAELEGSTEMMETGIKSIDLLTPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVRE-FIEDYLGDNL 214 G +IG+F G+G+GK+ L+ M R + + + VGER RE + ++E L Sbjct: 161 IKGGKIGLFGGAGVGKTVLIQEMITRVARNFGGTSVFAGVGERTREGNDLWVEMEEAGVL 220 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNS 273 K + +V DE P R LT +T+AEYF + +VLL +D+I RF + E++T Sbjct: 221 KDTALVFGQMDEPPGTRLRVALTGLTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLL 280 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ E+ L ERI + +IT++ ++ V D++ DP + + LD Sbjct: 281 GRIPSAVGYQPTLADEMGVLQERI--TSTRGHSITSMQAIYVPADDYTDPAPATTFAHLD 338 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS-LTHLIHRFEETRDIRLI 392 L+R +A G YP +DPL+S SR+ D + V++ + ++ +E +DI I Sbjct: 339 ATTELSREIASRGLYPAIDPLSSTSRILDPQYVGQTHYDVATRVKSILQENKELQDIIAI 398 Query: 393 GG 394 G Sbjct: 399 LG 400 >gi|113910812|gb|ABI48138.1| ATPase beta subunit [Frullania dilatata] Length = 463 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 28/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 74 ATLGRIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 130 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 131 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 189 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E+ + D+ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 190 VINEENISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF 247 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 248 VQAGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 305 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380 P + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 306 PAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTL 364 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 365 QRYKELQDIIAILG 378 >gi|58081504|gb|AAW65227.1| AtpB [Frullania eboracensis] Length = 389 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 162/312 (51%), Gaps = 28/312 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 2 SGRIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 117 Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 E+ + D+ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 118 NEENISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 175 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 176 AGSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 233 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 234 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 292 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 293 YKELQDIIAILG 304 >gi|4063536|gb|AAC98326.1| ATP synthase beta subunit [Capparis spinosa] Length = 456 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 176/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + + G V G + GR Sbjct: 24 KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDMGTPLSVPVGGATLGR 83 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 84 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 140 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 200 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 201 LPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 319 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|150035727|gb|ABR67209.1| ATP synthase beta subunit [Pseudosasa japonica] Length = 482 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D+ + I P + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPID---NLGPVDINATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N ++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 206 VINEKNFEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|114571341|ref|YP_758021.1| F0F1 ATP synthase subunit beta [Maricaulis maris MCS10] gi|122315071|sp|Q0AKW0|ATPB_MARMM RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|114341803|gb|ABI67083.1| ATP synthase F1 subcomplex beta subunit [Maricaulis maris MCS10] Length = 479 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/314 (30%), Positives = 159/314 (50%), Gaps = 29/314 (9%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR+++ G+PID GD+ + + + P+ + Q E + TGI+V+D+ P Sbjct: 87 GRIMSVTGQPIDE-----AGDVPHTMKAPIHRPAPSFDEQATEAEVLPTGIKVVDLLCPY 141 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVR----EFIEDYLG 211 G +IG+F G+G+GK+ L+ + F + + VGER RE E IE + Sbjct: 142 AKGGKIGLFGGAGVGKTVLIQELINNIAKLFGGYSVFAGVGERTREGNDLYWEMIESGVN 201 Query: 212 DNLK---------KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITR 261 + K + +V +E P R L+ + AEYF +G +VL +D+I R Sbjct: 202 KDPKEHDGSTEGSRCALVFGQMNEPPGARARVALSGLAQAEYFRDEEGKDVLFFVDNIFR 261 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +++ L ERI + KG+IT+V +V V D+ Sbjct: 262 FTQAGSELSALLGRIPSAVGYQPTLATDMGALQERI--TSTTKGSITSVQAVYVPADDMT 319 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VLNR+++E+G YP VDPL S SR+ + +E + ++ Sbjct: 320 DPAPATTFAHLDATTVLNRAISEKGIYPAVDPLDSTSRILEPRIVGEEHYGTARRVQEIL 379 Query: 381 HRFEETRDIRLIGG 394 R++ +DI I G Sbjct: 380 QRYKALQDIIAILG 393 >gi|61196966|gb|AAX39468.1| ATP synthase beta subunit [Nitellopsis obtusa] Length = 402 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|113910762|gb|ABI48113.1| ATPase beta subunit [Lunularia cruciata] Length = 470 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 81 ATLGRIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 137 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 138 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 197 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 198 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 257 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 258 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 315 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 316 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 374 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 375 KELQDIIAILG 385 >gi|7708658|emb|CAB89995.1| ATP synthase beta subunit [Stackhousia minima] Length = 486 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELETKFSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|16416758|gb|AAL18402.1|AF313556_1 ATP synthase beta chain [Polytrichastrum pallidisetum] Length = 394 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 5 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 61 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 62 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 121 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 122 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 181 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 182 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 239 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 240 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRY 298 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 299 KELQDIIAILG 309 >gi|61098498|gb|AAX37448.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098500|gb|AAX37449.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098502|gb|AAX37450.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098504|gb|AAX37451.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098506|gb|AAX37452.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098508|gb|AAX37453.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098510|gb|AAX37454.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098512|gb|AAX37455.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098514|gb|AAX37456.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098516|gb|AAX37457.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098518|gb|AAX37458.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098520|gb|AAX37459.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098522|gb|AAX37460.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098524|gb|AAX37461.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098526|gb|AAX37462.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098528|gb|AAX37463.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098530|gb|AAX37464.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098532|gb|AAX37465.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098534|gb|AAX37466.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098536|gb|AAX37467.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098538|gb|AAX37468.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098540|gb|AAX37469.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098542|gb|AAX37470.1| ATP synthase beta subunit [Phlomis lychnitis] gi|61098544|gb|AAX37471.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098546|gb|AAX37472.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098548|gb|AAX37473.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098550|gb|AAX37474.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098552|gb|AAX37475.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098554|gb|AAX37476.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098556|gb|AAX37477.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098558|gb|AAX37478.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098560|gb|AAX37479.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098562|gb|AAX37480.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098564|gb|AAX37481.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098566|gb|AAX37482.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098568|gb|AAX37483.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098570|gb|AAX37484.1| ATP synthase beta subunit [Phlomis crinita subsp. malacitana] gi|61098572|gb|AAX37485.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita] gi|61098574|gb|AAX37486.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita] gi|61098576|gb|AAX37487.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita] gi|61098578|gb|AAX37488.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita] gi|61098580|gb|AAX37489.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita] gi|61098582|gb|AAX37490.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita] gi|61098584|gb|AAX37491.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita] gi|61098586|gb|AAX37492.1| ATP synthase beta subunit [Phlomis crinita subsp. crinita] gi|61098588|gb|AAX37493.1| ATP synthase beta subunit [Phlomis crinita subsp. mauritanica] gi|61098590|gb|AAX37494.1| ATP synthase beta subunit [Phlomis crinita subsp. mauritanica] gi|61098592|gb|AAX37495.1| ATP synthase beta subunit [Phlomis crinita subsp. mauritanica] gi|61098594|gb|AAX37496.1| ATP synthase beta subunit [Phlomis purpurea] Length = 486 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+++S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|56675902|emb|CAB89967.2| ATP synthase beta subunit [Fallopia sachalinensis] Length = 488 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 212 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + +E K+ + + R+ Sbjct: 330 PATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|21633401|gb|AAM52175.1| ATP synthase beta subunit [Calycobolus glaber] Length = 490 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTXXIHISAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P HG +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRHGGKIGLFGGAGLGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|224539735|ref|ZP_03680274.1| hypothetical protein BACCELL_04644 [Bacteroides cellulosilyticus DSM 14838] gi|224518658|gb|EEF87763.1| hypothetical protein BACCELL_04644 [Bacteroides cellulosilyticus DSM 14838] Length = 506 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/327 (29%), Positives = 161/327 (49%), Gaps = 45/327 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKELDRAG-AYPIHRDPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQHGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ KKS+ ++ +E P R+ L+ +T+AE F +G Sbjct: 210 GEEFKKSMEEGNWDLSKVDYSEVEKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDQG 269 Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 270 AETGGSRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389 +E ++ + ++ R +E +DI Sbjct: 388 HVVGEEHYEVAQRVKQILQRNKELQDI 414 >gi|195183524|dbj|BAG66975.1| ATP synthase beta subunit [Melicytus novae-zelandiae] gi|195468867|dbj|BAG66973.1| ATP synthase beta subunit [Melicytus latifolius] Length = 489 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFVQLETKLLIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYEIAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|552857|gb|AAA84588.1| atpB gene product [Oryza sativa] Length = 498 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAH 264 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVIKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|6689410|emb|CAB65478.1| ATP synthase beta subunit [Tagetes sp. Nickrent 3061] Length = 498 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|325269432|ref|ZP_08136049.1| ATP synthase F1 sector beta subunit [Prevotella multiformis DSM 16608] gi|324988353|gb|EGC20319.1| ATP synthase F1 sector beta subunit [Prevotella multiformis DSM 16608] Length = 507 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 41/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PIDG + L K + + I + P ++ +TGI+VID+ P G Sbjct: 95 GRMMNVIGQPIDGMEPL-KMEGAYPIHREAPKFEELSTHKEMLQTGIKVIDLLEPYMKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212 +IG+F G+G+GK+ L+ + + + VGER RE + I D L G+ Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIRYGE 213 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250 +K++ +V +E P R L+ +T+AE F G Sbjct: 214 KFRKAMEEGKWDLSLVDQEELQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273 Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + ++G Sbjct: 274 NGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKRG 331 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD L+R + E G YP VDPL S SR+ D Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPLI 391 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + L+ + E +DI I G Sbjct: 392 VGKEHYDCAQRVKQLLQHYNELQDIIAILG 421 >gi|303235040|ref|ZP_07321664.1| ATP synthase ab C-terminal domain protein [Finegoldia magna BVS033A4] gi|302493895|gb|EFL53677.1| ATP synthase ab C-terminal domain protein [Finegoldia magna BVS033A4] Length = 462 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 94/316 (29%), Positives = 164/316 (51%), Gaps = 13/316 (4%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117 G+V+ I+ DI + + I+L + + GR + S GRV + LG+PID Sbjct: 42 GRVVEIDHDIAMVQVFEGTKGINLQETTVRFLGRPLELGVSEDMIGRVFDGLGRPIDNGP 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + D ++I ++R + +TG+ ID L GQ++ +F+GSG+ + L Sbjct: 102 KIIPED-KVDINGSSINPVSRDYPSEFIETGVSTIDGLNTLVRGQKLPIFSGSGLPHNKL 160 Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + AR D F V+ + +G E + FI D+ + ++V+ + +D+ I Sbjct: 161 AAQIARQAKVLGKDDKF-AVVFAAMGITFEEAQYFIGDFNKTGAIDRAVLFMNLADDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AE+ + KG +VL+I+ +T +A ++RE++ E+P RGYP +++ Sbjct: 220 ERLSTPKMALTCAEFLAFEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L L ER G +G+IT + + + D+ PI D I +G I+L+R L ++G Sbjct: 280 DLATLYERAGKIVGREGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKKGYE 339 Query: 349 PPVDPLASVSRLADKA 364 PP++ + S+SRL DK Sbjct: 340 PPINAIPSLSRLKDKG 355 >gi|291542393|emb|CBL15503.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus bromii L2-63] Length = 457 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 93/306 (30%), Positives = 157/306 (51%), Gaps = 17/306 (5%) Query: 98 SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 S RV + LG PIDG +L + D++ M+ PA R ++ +TGI ID Sbjct: 82 SPDMLSRVFDGLGNPIDGGPALIPEKRLDINGTPMN---PAA-RNYPQEFIQTGISAIDG 137 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIED 208 L GQ++ +F+ SG+ + L + AR D V+ + +G E F++ Sbjct: 138 LNTLVRGQKLPIFSASGLPHAQLAAQIARQAAVRGKDEQFAVVFAAMGITFEESDYFVQS 197 Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266 + + ++V+ V +++ I R P A+T AEY + +G +VL+I+ IT +A ++ Sbjct: 198 FKETGAIDRTVMFVNLANDPAIERIATPKMALTAAEYLAFDRGMHVLVIMTDITNYADAL 257 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 RE++ E+P RGYP ++++L L ER G + ++G+IT + + + D+ PI D Sbjct: 258 REVSAARKEVPGRRGYPGYMYTDLATLYERAGRLKGKEGSITLIPILTMPEDDKTHPIPD 317 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD--EKKLVSSLTHLIHRFE 384 I +G I+L+R L +G PP+D L S+SRL DK D K +++ L + Sbjct: 318 LTGYITEGQIILSRELYRKGITPPIDVLPSLSRLKDKGIGPDRTRKDHAATMNQLFAAYA 377 Query: 385 ETRDIR 390 +D R Sbjct: 378 RGKDAR 383 >gi|327313276|ref|YP_004328713.1| ATP synthase F1 subunit beta [Prevotella denticola F0289] gi|326945149|gb|AEA21034.1| ATP synthase F1, beta subunit [Prevotella denticola F0289] Length = 507 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 41/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PIDG + L K + + I + P ++ +TGI+VID+ P G Sbjct: 95 GRMMNVIGQPIDGMEPL-KMEGAYPIHREAPKFEELSTHKEMLQTGIKVIDLLEPYMKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212 +IG+F G+G+GK+ L+ + + + VGER RE + I D L G+ Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIRYGE 213 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250 +K++ +V +E P R L+ +T+AE F G Sbjct: 214 KFRKAMEEGKWDLSLVDQEEIQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273 Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + ++G Sbjct: 274 NGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKRG 331 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD L+R + E G YP VDPL S SR+ D Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPLI 391 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + L+ + E +DI I G Sbjct: 392 VGKEHYDCAQRVKQLLQHYNELQDIIAILG 421 >gi|323149174|ref|YP_004222003.1| ATP synthase CF1 beta subunit [Coccomyxa sp. C-169] gi|317467230|gb|ADV29851.1| ATP synthase CF1 beta subunit [Coccomyxa sp. C-169] Length = 483 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 24/309 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG D + I P ++ F+TGI+V+D+ P Sbjct: 98 GRIFNVLGEPVD---NLGPVDSKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 154 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 155 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYAEMKESKVID 213 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DNL S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 214 EDNLSASKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + R++E Sbjct: 332 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKETLQRYKE 390 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 391 LQDIIAILG 399 >gi|150035717|gb|ABR67204.1| ATP synthase beta subunit [Aristida adscensionis] Length = 432 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 39 GTTLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 95 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 96 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 155 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 156 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 215 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 216 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 273 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 274 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 333 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 334 KELQDIIAILG 344 >gi|57868948|gb|AAW57470.1| ATP synthase beta subunit [Empetrum hermaphroditum] Length = 493 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 100 GVTLGRIFNVLGEPVD---NLGPLDTHTTSPIHRSAPAFIELETKLLIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKET 215 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 216 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 275 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 276 QAGSEVSALLGRIPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 333 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + D+ K+ + + R Sbjct: 334 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYKIAQRVKQTLQR 393 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 394 YKELQDIIAILG 405 >gi|324990017|gb|EGC21958.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK353] Length = 464 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G S GQV+ + D +V + G + + F + S GR+ N Sbjct: 36 LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 +GKPIDG ++ + ++I + + R ++ +TGI ID L GQ++ VF Sbjct: 94 GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ L + AR SD V+ + +G E F+ D + +SV+ Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP +++ L L ER G +KG++T + + + D+ PI D I +G I+L+ Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332 Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364 R L G PP++ L S+SRL DK Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357 >gi|184127879|gb|ACC67839.1| ATP synthase beta chain [Psilotum nudum] Length = 403 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 156/312 (50%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D I P F+TGI+V+D+ P Sbjct: 14 ATLGRIFNVLGEPVD---NLGPINADKKSSIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 70 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG-- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 71 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESK 129 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL +S V V +E P R LTA+TIAEYF +VLL +D+I RF Sbjct: 130 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 189 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 190 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 247 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 248 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 306 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 307 YKELQDIIAILG 318 >gi|118614499|ref|YP_899414.1| ATP synthase CF1 beta subunit [Sorghum bicolor] gi|125987720|sp|A1E9T1|ATPB_SORBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118201133|gb|ABK79503.1| ATP synthase CF1 beta subunit [Sorghum bicolor] Length = 498 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|61968285|gb|AAX57069.1| ATP synthase beta subunit [Phyllanthus calycinus] Length = 479 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPVD---ELGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 DN+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 INEDNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 388 ELQDIIAILG 397 >gi|150035725|gb|ABR67208.1| ATP synthase beta subunit [Brachyelytrum aristosum] Length = 457 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 87 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 204 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 322 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|48478778|ref|YP_024386.1| ATP synthase CF1 beta subunit [Saccharum hybrid cultivar SP-80-3280] gi|50812535|ref|YP_054638.1| ATP synthase CF1 beta subunit [Saccharum officinarum] gi|75323362|sp|Q6ENV6|ATPB_SACOF RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|75324213|sp|Q6L392|ATPB_SACHY RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|48478680|gb|AAT44700.1| ATP synthase CF1 beta chain [Saccharum hybrid cultivar SP80-3280] gi|49659519|dbj|BAD27300.1| ATP synthase beta subunit [Saccharum hybrid cultivar NCo 310] Length = 498 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|110915626|gb|ABH02601.1| ATP synthase beta subunit [Dichelachne micrantha] Length = 490 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|62085198|gb|AAX63003.1| ATP synthase beta subunit [Tetracoccus dioicus] Length = 482 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIELDTKLEIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211 P G +IG+F G+G+GK+ L+ + + + VGER RE + ++ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGVSVFGGVGERTREGNDLYKEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L +D + + + R+ Sbjct: 324 PATTFAHLDATTVLSRKLAAKGIYPAVDPLDSTSTMLQPNIVGSDHYETARKVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|332365327|gb|EGJ43090.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1059] Length = 464 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G S GQV+ + D +V + G + + F + S GR+ N Sbjct: 36 LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 +GKPIDG ++ + ++I + + R ++ +TGI ID L GQ++ VF Sbjct: 94 GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ L + AR SD V+ + +G E F+ D + +SV+ Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP +++ L L ER G +KG++T + + + D+ PI D I +G I+L+ Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332 Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364 R L G PP++ L S+SRL DK Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357 >gi|325854995|ref|ZP_08171711.1| ATP synthase F1, beta subunit [Prevotella denticola CRIS 18C-A] gi|325483973|gb|EGC86913.1| ATP synthase F1, beta subunit [Prevotella denticola CRIS 18C-A] Length = 507 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 41/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+PIDG + L K + + I + P ++ +TGI+VID+ P G Sbjct: 95 GRMMNVIGQPIDGMEPL-KMEGAYPIHREAPKFEELSTHKEMLQTGIKVIDLLEPYMKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212 +IG+F G+G+GK+ L+ + + + VGER RE + I D L G+ Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIRYGE 213 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250 +K++ +V +E P R L+ +T+AE F G Sbjct: 214 KFRKAMEEGKWDLSLVDQEEIQKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273 Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + ++G Sbjct: 274 NGEPADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKRG 331 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD L+R + E G YP VDPL S SR+ D Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPLI 391 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + L+ + E +DI I G Sbjct: 392 VGKEHYDCAQRVKQLLQHYNELQDIIAILG 421 >gi|323350925|ref|ZP_08086583.1| V-type ATP synthase, subunit B [Streptococcus sanguinis VMC66] gi|322122907|gb|EFX94613.1| V-type ATP synthase, subunit B [Streptococcus sanguinis VMC66] gi|332363688|gb|EGJ41468.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK49] Length = 464 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G S GQV+ + D +V + G + + F + S GR+ N Sbjct: 36 LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 +GKPIDG ++ + ++I + + R ++ +TGI ID L GQ++ VF Sbjct: 94 GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ L + AR SD V+ + +G E F+ D + +SV+ Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP +++ L L ER G +KG++T + + + D+ PI D I +G I+L+ Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332 Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364 R L G PP++ L S+SRL DK Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357 >gi|89242526|gb|ABD64621.1| ATPase beta subunit [Cananga odorata] Length = 436 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 57 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESR 173 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF G +VLL +D+I RF Sbjct: 174 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNGQDVLLFIDNIFRFVQ 233 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 291 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + R+ Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 351 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 352 KELQDIIAILG 362 >gi|59857506|dbj|BAD89754.1| ATP synthase beta subunit [Nitella oligospira] gi|59857508|dbj|BAD89755.1| ATP synthase beta subunit [Nitella oligospira] Length = 340 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|7524659|ref|NP_042413.1| ATP synthase CF1 beta subunit [Pinus thunbergii] gi|1168580|sp|P41622|ATPB_PINTH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|1262653|dbj|BAA04370.1| H+-ATPase beta subunit [Pinus thunbergii] gi|228016394|gb|ACP51227.1| ATP synthase CF1 beta subunit [Pinus thunbergii] Length = 492 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 24/317 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G ++ I P F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219 Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGGYRPGVD 400 +E +DI I PG+D Sbjct: 397 KELQDIIAI----PGLD 409 >gi|11467199|ref|NP_043032.1| ATP synthase CF1 beta subunit [Zea mays] gi|114551|sp|P00827|ATPB_MAIZE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|552732|gb|AAA85356.1| coupling factor beta-subunit [Zea mays] gi|902229|emb|CAA60293.1| ATPase beta subunit [Zea mays] Length = 498 Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|296532596|ref|ZP_06895301.1| ATP synthase F1 sector beta subunit [Roseomonas cervicalis ATCC 49957] gi|296267087|gb|EFH13007.1| ATP synthase F1 sector beta subunit [Roseomonas cervicalis ATCC 49957] Length = 480 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 94/310 (30%), Positives = 157/310 (50%), Gaps = 21/310 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I + P ++ + TGI+V+D+ P G Sbjct: 90 LGRILNVIGEPIDERGPVPHAK-TYTIHREAPAFEDQATAAEILVTGIKVVDLLAPYLKG 148 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDY-------L 210 +IG+F G+G+GK+ L++ A+ V VGER RE + + L Sbjct: 149 GKIGLFGGAGVGKTVTIQELINNIAKGHGGVSVFAG-VGERTREGNDLYHEMVDAGVIKL 207 Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHS 265 G+N K +V +E P R L+ +++AEYF +G +VL +D+I RF + Sbjct: 208 GENGSTEGSKVALVYGQMNEPPGARARVALSGLSMAEYFRDEQGQDVLFFIDNIFRFTQA 267 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + +KG+IT+V ++ V D+ DP Sbjct: 268 GAEVSALLGRIPSAVGYQPTLATDMGALQERI--TSTKKGSITSVQAIYVPADDLTDPAP 325 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+RS+AE+ +P VDPL S SR D +E K + ++ ++ Sbjct: 326 ATSFAHLDATTVLSRSIAEQAIFPAVDPLDSTSRALDPRIIGEEHYKTAREVQRILQTYK 385 Query: 385 ETRDIRLIGG 394 +DI I G Sbjct: 386 SLQDIIAILG 395 >gi|328944760|gb|EGG38921.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1087] Length = 464 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G S GQV+ + D +V + G + + F + S GR+ N Sbjct: 36 LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 +GKPIDG ++ + ++I + + R ++ +TGI ID L GQ++ VF Sbjct: 94 GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ L + AR SD V+ + +G E F+ D + +SV+ Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP +++ L L ER G +KG++T + + + D+ PI D I +G I+L+ Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332 Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364 R L G PP++ L S+SRL DK Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357 >gi|113910920|gb|ABI48192.1| ATPase beta subunit [Helminthostachys zeylanica] Length = 468 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 157/308 (50%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D LG D S + K PA R + F+TGI+V+D+ P Sbjct: 82 GRIFNVLGEPVD---DLGPVDASETSPIHKPAPAFTRLDTKLSIFETGIKVVDLLAPYRR 138 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + + Sbjct: 139 GGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 197 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 K +V +ESP R LTA+T+AEYF +VLL +D+I RF + Sbjct: 198 EQNISESKVALVYGQMNESPGARTRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 257 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 258 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 315 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + +E + + + R++E Sbjct: 316 TFAHPDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKEL 375 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 376 QDIIAILG 383 >gi|7708177|emb|CAB90029.1| ATP synthase beta subunit [Brexia madagascariensis] Length = 478 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 92 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 209 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|108796670|ref|YP_636546.1| CF1 beta subunit of ATP synthase [Zygnema circumcarinatum] gi|118573783|sp|Q32RI0|ATPB_ZYGCR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|61393654|gb|AAX45796.1| CF1 beta subunit of ATP synthase [Zygnema circumcarinatum] Length = 489 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+PID +LG D + + + + PA + + F+TGI+V+D+ P Sbjct: 105 LGRIFNVLGEPID---NLGPVDAATTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 222 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 281 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W + + + R++E Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGTEHYDTAQGVKQTLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|119350515|gb|ABL63208.1| AtpB [Myrmecia israelensis] Length = 393 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 158/307 (51%), Gaps = 20/307 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + D I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNLGPVDNKD-GFPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD-- 212 +IG+F G+G+GK+ L+ + A++ V + ER RE E E + D Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIDEQ 156 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 N+ S V V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 157 NISNSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 216 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 217 SALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTF 274 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + + W E+ + ++ +HR++E + Sbjct: 275 AHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKSTLHRYKELQ 333 Query: 388 DIRLIGG 394 DI I G Sbjct: 334 DIIAILG 340 >gi|113910814|gb|ABI48139.1| ATPase beta subunit [Cololejeunea biddlecomiae] Length = 471 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 28/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 84 ATLGRIFNVLGEPVD---NLGPVEASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 140 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 141 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKESK 199 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E+ + D+ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 200 VINEENIPDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF 257 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 258 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 315 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380 P + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 316 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTL 374 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 375 QRYKELQDIIAILG 388 >gi|4063552|gb|AAC98334.1| ATP synthase beta subunit [Muntingia calabura] Length = 456 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGSVDTRTTAPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|62902808|gb|AAY19319.1| ATP synthase beta subunit [Dicarpellum pancheri] Length = 488 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETQLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|11467760|ref|NP_050811.1| ATP synthase CF1 beta subunit [Nephroselmis olivacea] gi|17432924|sp|Q9TL34|ATPB_NEPOL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|5880689|gb|AAD54782.1|AF137379_5 CF1 beta subunit of ATP synthase [Nephroselmis olivacea] Length = 491 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 156/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D +G + ++ I + P ++ F+TGI+V+D+ P G Sbjct: 98 LGRIFNVLGEPVDNMGPVGN-EKTLPIHREAPAFVDLDTKLSIFETGIKVVDLLAPYRRG 156 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + + + Sbjct: 157 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMCESKVINK 215 Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 216 ADVKSSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGSE 275 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 276 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 333 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + + W D + + R++E Sbjct: 334 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWILGDDHYGTAQRVKQTLQRYKEL 392 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 393 QDIIAILG 400 >gi|327488659|gb|EGF20459.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1058] Length = 464 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G S GQV+ + D +V + G + + F + S GR+ N Sbjct: 36 LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 +GKPIDG ++ + ++I + + R ++ +TGI ID L GQ++ VF Sbjct: 94 GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ L + AR SD V+ + +G E F+ D + +SV+ Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP +++ L L ER G +KG++T + + + D+ PI D I +G I+L+ Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332 Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364 R L G PP++ L S+SRL DK Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357 >gi|189465910|ref|ZP_03014695.1| hypothetical protein BACINT_02273 [Bacteroides intestinalis DSM 17393] gi|189434174|gb|EDV03159.1| hypothetical protein BACINT_02273 [Bacteroides intestinalis DSM 17393] Length = 506 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/327 (29%), Positives = 161/327 (49%), Gaps = 45/327 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKELDRAG-AYPIHRDPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQHGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ KKS+ ++ +E P R+ L+ +T+AE F +G Sbjct: 210 GEEFKKSMEEGNWDLSKVDYNEVEKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDQG 269 Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 270 AETGGSRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389 +E ++ + ++ R +E +DI Sbjct: 388 HVVGEEHYEVAQRVKQILQRNKELQDI 414 >gi|124486043|ref|YP_001030659.1| V-type ATP synthase subunit B [Methanocorpusculum labreanum Z] gi|167016629|sp|A2SST6|VATB_METLZ RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|124363584|gb|ABN07392.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region [Methanocorpusculum labreanum Z] Length = 458 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 102/359 (28%), Positives = 176/359 (49%), Gaps = 36/359 (10%) Query: 60 GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ + D+V + G+G + + F F++ S GR+++ GKPIDG Sbjct: 41 GQVLDTSEDLVVVQCFETTTGLGRDTGV---RFLGETFKMPVSKTMLGRILSGGGKPIDG 97 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 ++ D ++I R +TGI ID L GQ++ +F+ +G+ + Sbjct: 98 GPAIVP-DKRLDINGAAINPYARGTPRDFIQTGISTIDGTNTLVRGQKLPIFSSAGLPHN 156 Query: 176 TLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227 + AR SD F V+ + +G E F+ D+ L+++VV + +D+ Sbjct: 157 EIALQIARQAKVPGSSDEF-AVVFAAMGITREEANYFMADFERTGALERAVVFLNLADDP 215 Query: 228 PILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 + R + P A+T AEY + + G +VL+IL +T + ++R+I E+P RGYP + Sbjct: 216 AVERTVTPRLALTTAEYLAYELGYHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYM 275 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L + ER G + KG++T + + + GD+ PI D I +G IV++ L +G Sbjct: 276 YTDLASIYERAGIIKGLKGSVTQIPILTMPGDDITHPIPDLTGYITEGQIVISPELHRKG 335 Query: 347 RYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDL 401 YPP++ L S+SRL + K + ++ K VS + + GY GVDL Sbjct: 336 IYPPINVLPSLSRLMNLGIGKGMTREDHKKVSDMMY--------------SGYAEGVDL 380 >gi|19033057|gb|AAL83513.1|AF408785_1 ATP synthase beta subunit [Nitellopsis obtusa] Length = 402 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|156530121|gb|ABU75157.1| AtpB [Castela retusa] Length = 496 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K+ D +GQ+I + ++ V + E ++ G V G + GR Sbjct: 48 KSRDTVGQLINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 107 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I + P + F+TGI+V+D+ P G Sbjct: 108 IFNVLGEPVD---NLGPVDTRTTSPIHKRAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 165 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 224 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 225 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 284 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 285 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 342 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 343 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLXRYKELQDI 402 Query: 390 RLIGG 394 I G Sbjct: 403 IAILG 407 >gi|4995647|emb|CAB44210.1| H(+)-transporting ATP synthase [Malva canariensis] Length = 482 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 162/314 (51%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 210 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E+ LG++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 211 GVINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 268 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 269 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 326 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 327 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 386 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 387 QRYKELQDIIAILG 400 >gi|4063558|gb|AAC98337.1| ATP synthase beta subunit [Pelargonium cotyledonis] Length = 456 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 193 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 194 GVINEQKVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 253 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 254 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 311 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + D+ ++ + + R Sbjct: 312 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDQHYEIAQRVKQTLQR 371 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 372 YKELQDIIAILG 383 >gi|147919747|ref|YP_686507.1| V-type ATP synthase subunit B [uncultured methanogenic archaeon RC-I] gi|121687897|sp|Q0W362|VATB_UNCMA RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|110621903|emb|CAJ37181.1| A(1)A(0)-type ATP synthase, subunit B [uncultured methanogenic archaeon RC-I] Length = 458 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 102/361 (28%), Positives = 183/361 (50%), Gaps = 23/361 (6%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC 102 + L D V +G+ D+ V+ + V+ GI + S+ F ++ S Sbjct: 31 IVLSDGTVKRGQVLDSSNDVVAVQ---VFEGTSGISRDSSVK---FLGETIKMPVSKDML 84 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ G+P+DG ++ + +EI+ +R++ + +TGI ID L GQ Sbjct: 85 GRILSGSGEPLDGGPAIIP-EKRLEIVGAAINPYSRRQPKDFIQTGISTIDGMNTLVRGQ 143 Query: 163 RIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNL 214 ++ +F+GSG+ + + AR ++ F V+ +G E + F++D+ L Sbjct: 144 KLPIFSGSGLPHNEIALQIARQAKVVGSTEPF-AVVFCAMGITAEEAQTFMKDFERTGAL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNS 273 +++VV + +D+ I R + P A+T AEY + + D +VL+I +T + ++R+I Sbjct: 203 ERAVVFLNLADDPAIERIITPRLALTTAEYLAFEHDMHVLVIYTDMTNYCEALRQIGAAR 262 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 E+P RGYP ++++L +L ER G E +KG+IT V + + GD+ PI D I + Sbjct: 263 EEVPGRRGYPGYMYTDLAQLYERAGIIEGKKGSITQVPILTMPGDDITHPIPDLTGYITE 322 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA----DEKKLVSSLTHLIHRFEETRDI 389 G IV+ R L + YPP++ S+SRL A ++ K VS + + E +D+ Sbjct: 323 GQIVVARDLHRKNIYPPINVSPSLSRLMSLGIGAGKTREDHKAVSDQCY--SAYAEGKDL 380 Query: 390 R 390 R Sbjct: 381 R 381 >gi|327472216|gb|EGF17653.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK408] Length = 464 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G S GQV+ + D +V + G + + F + S GR+ N Sbjct: 36 LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 +GKPIDG ++ + ++I + + R ++ +TGI ID L GQ++ VF Sbjct: 94 GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ L + AR SD V+ + +G E F+ D + +SV+ Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP +++ L L ER G +KG++T + + + D+ PI D I +G I+L+ Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332 Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364 R L G PP++ L S+SRL DK Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357 >gi|237688540|ref|YP_002905158.1| ATP synthase CF1 beta subunit [Pinus contorta] gi|226875368|gb|ACO89106.1| ATP synthase CF1 beta subunit [Pinus contorta] Length = 492 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 24/317 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G ++ I P F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219 Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGGYRPGVD 400 +E +DI I PG+D Sbjct: 397 KELQDIIAI----PGLD 409 >gi|184127863|gb|ACC67831.1| ATP synthase beta chain [Marattia fraxinea] Length = 403 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D+ + + K PA + + F+TGI+V+D+ P Sbjct: 16 LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 72 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 73 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 132 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 133 QENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 192 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 193 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 250 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 251 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 309 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 310 LQDIIAILG 318 >gi|118561664|dbj|BAF37582.1| ATP synthase beta subunit [Nitella comptonii] gi|118561666|dbj|BAF37583.1| ATP synthase beta subunit [Nitella comptonii] gi|118561669|dbj|BAF37584.1| ATP synthase beta subunit [Nitella comptonii] Length = 340 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|61196968|gb|AAX39469.1| ATP synthase beta subunit [Nitella hyalina] Length = 402 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|323474900|gb|ADX85506.1| ATP synthase, B subunit [Sulfolobus islandicus REY15A] Length = 463 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 94/307 (30%), Positives = 160/307 (52%), Gaps = 19/307 (6%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 S GR+ N LG +D + KG+ S + PA R+ E+ +TGI ID Sbjct: 84 SEEMLGRIFNPLGDSLDNGPPVIKGEKRDINGSPLNPAA-REYPEEFIQTGISAIDGLNA 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV---REFIED 208 L GQ++ +F+GSG+ + L + A+ V+ + +G R + R+F E+ Sbjct: 143 LLRGQKLPIFSGSGLPANMLAAQIAKQATVRGEESNFAVVFAAIGARYDDALFFRKFFEE 202 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 N + ++V+ ++E +++ + P TA+T+AEY + + D +VL IL +T + ++R Sbjct: 203 TGAIN--RVAMIVSLANEPSVMKTLTPKTALTLAEYLAFEQDMHVLAILIDMTNYCEALR 260 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 EI+ E+P GYP ++++L + ER G +KG+IT + + + D+ PI D Sbjct: 261 EISAAREEVPGRGGYPGYMYTDLATIYERAGKVLGKKGSITQMPILTMPNDDITHPIPDL 320 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRF 383 I +G IVL+R+L +G YPP++ L S+SRLA + + D+ K VS+ L + Sbjct: 321 TGYITEGQIVLDRALYNKGIYPPINVLMSLSRLAKDGIGEGKTRDDHKDVSN--QLFASY 378 Query: 384 EETRDIR 390 D R Sbjct: 379 ARAVDTR 385 >gi|57868956|gb|AAW57474.1| ATP synthase beta subunit [Bruinsmia styracoides] Length = 492 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 99 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 214 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 215 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNAQNVLLFIDNIFRFV 274 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 275 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 332 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L + + + + R Sbjct: 333 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYETAQRVKQTLQR 392 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 393 YKELQDIIAILG 404 >gi|44885358|dbj|BAD11922.1| ATP synthase beta subunit [Nitella pseudoflabellata] gi|44885360|dbj|BAD11923.1| ATP synthase beta subunit [Nitella pseudoflabellata] gi|44885362|dbj|BAD11924.1| ATP synthase beta subunit [Nitella pseudoflabellata] gi|44885364|dbj|BAD11925.1| ATP synthase beta subunit [Nitella megaspora] gi|56342291|dbj|BAD74007.1| ATP synthase beta subunit [Nitella megaspora] gi|59857510|dbj|BAD89756.1| ATP synthase beta subunit [Nitella imperialis] Length = 340 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|192289475|ref|YP_001990080.1| F0F1 ATP synthase subunit alpha [Rhodopseudomonas palustris TIE-1] gi|192283224|gb|ACE99604.1| ATP synthase F1, alpha subunit [Rhodopseudomonas palustris TIE-1] Length = 517 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 7/320 (2%) Query: 81 ISLGDLVFHWGRF-RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQ 139 I GD V G R+ GR+++ LG+P+DG + D+ I + P ++R Sbjct: 86 IEAGDRVRGTGDVVRVPVGPALLGRIVDPLGRPLDGKGPVAT-DMLEPIDAPAPAIVDRD 144 Query: 140 RVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL-LSMFARSDCFDKVIISL-VGE 197 V + +TG+ V+D L GQR + IGK+T+ + D + + + VG+ Sbjct: 145 LVTQPVQTGLVVVDTLFALGRGQRELIIGDRAIGKTTIAIDTIVNQKTSDIICVYVAVGQ 204 Query: 198 RGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLIL 256 + VR I+ + ++ ++VVA S SP L+ +AP A ++AEYF +G + L+++ Sbjct: 205 KTASVRRAIDAIMAFGAPERCIIVVAGSSSSPGLQWIAPFAAFSMAEYFRDRGQHALIVV 264 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK--GNITAVISVL 314 D +++ A S REI+ + + P YP +F RLLER KEK G++TA+ Sbjct: 265 DDLSKHAASHREISLLTRQSPGREAYPGDIFYVHARLLERAAKLSKEKGGGSLTALPIAE 324 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS 374 D N + I ++ SI DG IVL+ L EG+ P VD SVSR+ K + ++ Sbjct: 325 TDAGNLSAYIPTNLISITDGQIVLDARLFHEGQKPAVDVGTSVSRVGGKTQAQALREAAE 384 Query: 375 SLTHLIHRFEETRDIRLIGG 394 ++ +F E GG Sbjct: 385 TVRLDYAQFLELETFTRFGG 404 >gi|157149878|ref|YP_001449458.1| V-type ATP synthase subunit B [Streptococcus gordonii str. Challis substr. CH1] gi|262281770|ref|ZP_06059539.1| V-type sodium ATP synthase [Streptococcus sp. 2_1_36FAA] gi|189030164|sp|A8AUJ8|VATB_STRGC RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|157074672|gb|ABV09355.1| v-type sodium ATP synthase, chain B [Streptococcus gordonii str. Challis substr. CH1] gi|262262224|gb|EEY80921.1| V-type sodium ATP synthase [Streptococcus sp. 2_1_36FAA] gi|324992667|gb|EGC24588.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK405] gi|324995804|gb|EGC27715.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK678] gi|325686390|gb|EGD28420.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK72] gi|325689172|gb|EGD31179.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK115] gi|325697249|gb|EGD39135.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK160] gi|327460070|gb|EGF06409.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1] gi|327463436|gb|EGF09755.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1057] gi|327467960|gb|EGF13450.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK330] gi|332360179|gb|EGJ37993.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK1056] gi|332364949|gb|EGJ42717.1| V-type ATP synthase, subunit B [Streptococcus sanguinis SK355] Length = 464 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 13/325 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G S GQV+ + D +V + G + + F + S GR+ N Sbjct: 36 LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 +GKPIDG ++ + ++I + + R ++ +TGI ID L GQ++ VF Sbjct: 94 GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ L + AR SD V+ + +G E F+ D + +SV+ Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSVLF 212 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP +++ L L ER G +KG++T + + + D+ PI D I +G I+L+ Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332 Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364 R L G PP++ L S+SRL DK Sbjct: 333 RDLYNSGYRPPINVLPSLSRLKDKG 357 >gi|228017024|gb|ACP51847.1| ATP synthase CF1 beta subunit [Pinus canariensis] gi|228017716|gb|ACP52528.1| ATP synthase CF1 beta subunit [Pinus pinaster] Length = 492 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 24/317 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G ++ I P F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219 Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGGYRPGVD 400 +E +DI I PG+D Sbjct: 397 KELQDIIAI----PGLD 409 >gi|183217748|ref|YP_001837367.1| ATP synthase CF1 beta subunit [Guizotia abyssinica] gi|179366263|gb|ACB86534.1| ATP synthase CF1 beta subunit [Guizotia abyssinica] Length = 498 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 110/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G D+V + GR Sbjct: 50 KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVVDTGAPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D S I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + DE + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|20467363|gb|AAL27812.1| ATPase beta subunit [Ephedra monosperma] Length = 449 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 159/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 73 LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 129 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 130 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 189 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 190 EKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 249 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 250 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 307 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL++ LA +G YP VDPL S S L + ++ + + R++E Sbjct: 308 TFAHLDATTVLSKGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 367 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 368 QDIIAILG 375 >gi|110915608|gb|ABH02592.1| ATP synthase beta subunit [Calotheca brizoides] gi|110915612|gb|ABH02594.1| ATP synthase beta subunit [Briza subaristata] gi|110915632|gb|ABH02604.1| ATP synthase beta subunit [Echinopogon caespitosus] gi|110915650|gb|ABH02613.1| ATP synthase beta subunit [Gymnachne koelerioides] Length = 490 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|56675904|emb|CAB90001.2| ATP synthase beta subunit [Salacia pallescens] Length = 482 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|228016461|gb|ACP51293.1| ATP synthase CF1 beta subunit [Pinus torreyana subsp. insularis] Length = 492 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 24/317 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G ++ I P F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219 Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGGYRPGVD 400 +E +DI I PG+D Sbjct: 397 KELQDIIAI----PGLD 409 >gi|58081510|gb|AAW65230.1| AtpB [Lunularia cruciata] Length = 382 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ P Sbjct: 2 SGRIFNVLGEPVD---NLGPVDANTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 119 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 296 LQDIIAILG 304 >gi|66276291|gb|AAY44160.1| ATP synthase beta subunit [Schizopepon bryoniifolius] Length = 481 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 88 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y G Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYTGMKESG 204 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 205 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 383 KELQDIIAILG 393 >gi|154484206|ref|ZP_02026654.1| hypothetical protein EUBVEN_01917 [Eubacterium ventriosum ATCC 27560] gi|149734683|gb|EDM50600.1| hypothetical protein EUBVEN_01917 [Eubacterium ventriosum ATCC 27560] Length = 458 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 94/311 (30%), Positives = 157/311 (50%), Gaps = 16/311 (5%) Query: 98 SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + LG PIDG D L + + ++ P A R + +TGI ID Sbjct: 82 SPDMLGRVFDGLGNPIDGGPDILPEERRDINGVAMNPAA--RNYPSEFIQTGISAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ +F+ SG+ + L + A+ +D V+ + VG E FI + Sbjct: 140 TLVRGQKLPIFSASGLPHANLAAQIAKQAKVIGTDEPFAVVFAAVGITFEESNFFINSFK 199 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268 + ++V+ + +++ + R P A+T AEY + KG +VL+I+ IT +A ++RE Sbjct: 200 ETGAIDRTVLFINLANDPAVERIATPRMALTAAEYLAFEKGMHVLVIITDITNYADALRE 259 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ E+P RGYP ++++L + ER G + G+IT + + + D+ PI D Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLATMYERAGRQRGKDGSITMIPILTMPEDDKTHPIPDLT 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRF 383 I +G I+L+R L +G PP+D L S+SRL DK AD +++ L R Sbjct: 320 GYITEGQIILSRDLYRKGITPPIDVLPSLSRLKDKGIGEGKTRADHSNVMNQLFSAYARG 379 Query: 384 EETRDIRLIGG 394 +E +++ I G Sbjct: 380 KEAKELMTILG 390 >gi|62085099|gb|AAX62956.1| ATP synthase beta subunit [Austrobuxus megacarpus] Length = 482 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211 P G +IG+F G+G+GK+ L+ + + + VGER RE + ++ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKEHGGVSVFGGVGERTREGNDLYKEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + E + S+ + R+ Sbjct: 324 PATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTSTMLQPTIVGKEHYETAQSVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|44885366|dbj|BAD11926.1| ATP synthase beta subunit [Nitella hyalina] gi|44885368|dbj|BAD11927.1| ATP synthase beta subunit [Nitella hyalina] gi|44885370|dbj|BAD11928.1| ATP synthase beta subunit [Nitella gracillima] gi|56342293|dbj|BAD74008.1| ATP synthase beta subunit [Nitella gracillima] gi|59857512|dbj|BAD89757.1| ATP synthase beta subunit [Nitella vieillardii] gi|59857514|dbj|BAD89758.1| ATP synthase beta subunit [Nitella vieillardii] gi|59857516|dbj|BAD89759.1| ATP synthase beta subunit [Nitella hyalina] gi|59857518|dbj|BAD89760.1| ATP synthase beta subunit [Nitella morongii] Length = 340 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|56751796|ref|YP_172497.1| F0F1 ATP synthase subunit beta [Synechococcus elongatus PCC 6301] gi|81301124|ref|YP_401332.1| F0F1 ATP synthase subunit beta [Synechococcus elongatus PCC 7942] gi|114569|sp|P07890|ATPB_SYNP6 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118573769|sp|Q31KS4|ATPB_SYNE7 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|48024|emb|CAA29362.1| unnamed protein product [Synechococcus elongatus PCC 6301] gi|56686755|dbj|BAD79977.1| ATP synthase beta subunit [Synechococcus elongatus PCC 6301] gi|81170005|gb|ABB58345.1| ATP synthase F1, beta subunit [Synechococcus elongatus PCC 7942] Length = 484 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 159/308 (51%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + S I P + + K F+TGI+VID+ P Sbjct: 95 ATLGRIFNVLGEPVDELGPVNAATTS-PIHRDAPKLTDLETKPKVFETGIKVIDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGRE----VREFIEDYLGD 212 G +IG+F G+G+GK+ L+ + + + VGER RE +EF E + D Sbjct: 154 QGGKIGLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYQEFKESGVID 213 Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ S V V +E P R L+A+T+AE+F +VLL +D+I RF + Sbjct: 214 EKNIANSKVALVYGQMNEPPGARMRVGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ +L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGQLQERI--TSTLEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + +E + ++ + R++E Sbjct: 332 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPSIVGEEHYRTARAVQSTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|326790468|ref|YP_004308289.1| H+transporting two-sector ATPase alpha/subunit beta central region [Clostridium lentocellum DSM 5427] gi|326541232|gb|ADZ83091.1| H+transporting two-sector ATPase alpha/beta subunit central region [Clostridium lentocellum DSM 5427] Length = 461 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/329 (29%), Positives = 164/329 (49%), Gaps = 30/329 (9%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+VI++ V + IS G+ + F ++ S GR N +G+PIDG Sbjct: 42 GKVIKVEGKTVVVQVFEGTAGISTGNASVKFTGEPLKLPLSKEILGRSFNGIGEPIDG-- 99 Query: 118 SLGKGDLSMEIMSKVPPAMN-------RQRVEKGF-KTGIRVIDIFTPLCHGQRIGVFAG 169 + +I+SK +N +R + F +TG+ ID L GQ++ +F+G Sbjct: 100 -------AYQIISKDKYNVNGRPINPVARRYPRNFIQTGVSAIDALMTLIRGQKLPIFSG 152 Query: 170 SGIGKSTLLSMF--------ARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221 +GI + L A +D F V+ +G R + F + + VV+ Sbjct: 153 NGIAHNELAVQIVKQAKIEGANADNF-AVVFGAMGVRHDDASYFTRSFEAAGVLDHVVMY 211 Query: 222 ATSDESPILRKMA-PLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279 + PI +++ P A+T AEY + + D +VL++L +T ++ ++RE+++ GE+P Sbjct: 212 LNLADDPITERISTPRCALTAAEYLAFEQDMHVLVVLTDMTSYSEALREMSSTRGEVPSR 271 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 +GYP ++S+L + ER G E ++G+IT + + + D+ PI D I +G IVLN Sbjct: 272 KGYPGYLYSDLSTIYERAGMLEGKQGSITLIPILTMPNDDITHPIPDLTGFITEGQIVLN 331 Query: 340 RSLAEEGRYPPVDPLASVSRLADKAWSAD 368 R L ++G YPP+D L S+SRL D Sbjct: 332 RVLNQKGIYPPIDILPSLSRLMKDGIGED 360 >gi|27435896|gb|AAO13276.1| ATP synthase beta subunit [Sagittaria latifolia] Length = 489 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ KS V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENITKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|62085227|gb|AAX63016.1| ATP synthase beta subunit [Gymnosporia senegalensis] Length = 483 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|325529707|gb|EGD06569.1| type III secretion apparatus H+-transporting two-sector ATPase [Burkholderia sp. TJI49] Length = 276 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 82/202 (40%), Positives = 114/202 (56%), Gaps = 3/202 (1%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGDD 117 L +V+ + + P+G +S V GR + P GRV++ LG+P+D D Sbjct: 76 LAEVVGFSRQTTLLTPLGDVAGLSPETTVVPSGREHVFPVGDGLFGRVLDGLGRPLD-DR 134 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 G + P + R+ ++ F TG+RVID L GQR+G+FA SG+GKSTL Sbjct: 135 GPVAGAAWVSTQQDPPNPLARKMIDTPFPTGVRVIDGLMTLGVGQRVGIFAPSGVGKSTL 194 Query: 178 LSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLK-KSVVVVATSDESPILRKMAPL 236 L M AR D +I+LVGERGREVREFIE L ++ +S+VVV+TSD + R + L Sbjct: 195 LGMIARGAQADVNVIALVGERGREVREFIEHSLSPEVRARSIVVVSTSDRPAMERVKSAL 254 Query: 237 TAVTIAEYFSSKGDNVLLILDS 258 A IAE+F G VLL++DS Sbjct: 255 VATAIAEHFRDAGRRVLLLVDS 276 >gi|4995717|emb|CAB44232.1| H(+)-transporting ATP synthase [Muntingia calabura] Length = 488 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGSVDTRTTAPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|62085229|gb|AAX63017.1| ATP synthase beta subunit [Paxistima canbyi] Length = 483 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|228016009|gb|ACP50848.1| ATP synthase CF1 beta subunit [Pinus resinosa] Length = 492 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 103/319 (32%), Positives = 161/319 (50%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRPAPAFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + D VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|209963703|ref|YP_002296618.1| F0F1 ATP synthase subunit beta [Rhodospirillum centenum SW] gi|209957169|gb|ACI97805.1| ATP synthase F1, beta subunit [Rhodospirillum centenum SW] Length = 487 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 156/293 (53%), Gaps = 8/293 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ LG+P D + + I PP + F+TGI+VID+ PL G Sbjct: 94 GRLVDVLGRPGDAGEPITAEAPRWPIHRPAPPLAGQTPRRDVFETGIKVIDLLAPLARGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 + G+F G+G+GK+ L++ + + +S+ +GER RE +E +E+ L+++ Sbjct: 154 KGGMFGGAGVGKTVLVTELIHNMVAQQTGLSVFAGIGERSREGQELLEEMRRSGVLERTA 213 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LTA+TIAE+F + +VLL++D++ RF + E++ G LP Sbjct: 214 LVFGQMNEPPGARWRVGLTALTIAEWFRDEARRDVLLLMDNVFRFVQAGAEVSGLLGRLP 273 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +E+ L ERI + +TA+ +V V D+ DP + LD IV Sbjct: 274 SRVGYQPTLITEIAELEERI--ASVPGATVTAIQAVYVPADDFTDPAVAELFGHLDSAIV 331 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+RS+A EG YP VDPLAS S L D +E + + L+ + E +DI Sbjct: 332 LSRSMAAEGLYPAVDPLASSSALLDPLVVGEEHYRTAEDVRALLAHYRELQDI 384 >gi|126178239|ref|YP_001046204.1| V-type ATP synthase subunit B [Methanoculleus marisnigri JR1] gi|167016632|sp|A3CS72|VATB_METMJ RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|125861033|gb|ABN56222.1| ATP synthase, B subunit [Methanoculleus marisnigri JR1] Length = 461 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/361 (27%), Positives = 176/361 (48%), Gaps = 23/361 (6%) Query: 43 VCLGDFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWC 102 + D V +G+ D +++ + V+ GIG + + F ++ Sbjct: 31 IVTADGTVKRGQVLDTSDEIVVVQ---VFETTAGIGRD---SGIRFTGETIKMPVGKDML 84 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+++ GKPIDG + + +EI R E +TGI ID L GQ Sbjct: 85 GRILSGGGKPIDGGPDIVP-EKRLEITGAAINPYARSSPEDFIQTGISTIDGTNTLVRGQ 143 Query: 163 RIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-L 214 ++ +F+ SG+ + + AR ++ F V+ + +G E F+ D+ L Sbjct: 144 KLPIFSASGLPHNDVALQIARQAKVPGSTEEF-AVVFAAMGITREEANYFMADFEKTGAL 202 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNS 273 ++SVV + +D+ + R + P A+T AEY + G +VL+IL +T + ++R+I Sbjct: 203 ERSVVFLNLADDPAVERTITPRLALTTAEYLAFDLGYHVLVILTDMTNYCEALRQIGAAR 262 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 E+P RGYP ++++L + ER G + KG++T + + + GD+ PI D I + Sbjct: 263 EEVPGRRGYPGYMYTDLASIYERAGIIKGVKGSVTQIPILTMPGDDITHPIPDLTGYITE 322 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDI 389 G IV+NR L +G YPP++ L S+SRL + + + ++ K VS L + E D+ Sbjct: 323 GQIVVNRELHRKGIYPPINVLPSLSRLMNLGIGEGHTREDHKKVSD--QLYAAYAEGNDL 380 Query: 390 R 390 R Sbjct: 381 R 381 >gi|7688411|emb|CAB89743.1| ATP synthase beta subunit [Utricularia gibba] Length = 481 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|62085217|gb|AAX63011.1| ATP synthase beta subunit [Denhamia celastroides] Length = 481 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|150035733|gb|ABR67212.1| ATP synthase beta subunit [Streptochaeta angustifolia] Length = 479 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 87 ATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 143 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 144 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 203 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 204 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 263 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 264 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 322 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 381 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 382 ELQDIIAILG 391 >gi|123778432|sp|Q0QEP2|ATPB_MESAU RecName: Full=ATP synthase subunit beta, mitochondrial gi|89574019|gb|ABD77235.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Mesocricetus auratus] Length = 362 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 95/299 (31%), Positives = 156/299 (52%), Gaps = 17/299 (5%) Query: 109 LGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFA 168 +G+PI+ + + I ++ P +N ++ TGI+V+D+ P G +IG+F Sbjct: 1 IGEPINERGPIKTKQFA-PIHAEAPDFLNMSVDQEILVTGIKVVDLLAPYAKGGKIGLFG 59 Query: 169 GSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YLGDNLKKS 217 G+ +GK+ L+ + A++ V VGER RE E IE L D K Sbjct: 60 GAVVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINLKDATSKV 118 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276 +V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G + Sbjct: 119 ALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRI 178 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + + LD Sbjct: 179 PSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATT 236 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 VL+R++AE G YP VDPL S SR+ D +E V+ + ++ ++ +DI I G Sbjct: 237 VLSRAIAELGIYPAVDPLDSTSRIMDPNIVGNEHYDVARGVQKILQDYKSLQDIIAILG 295 >gi|44885372|dbj|BAD11929.1| ATP synthase beta subunit [Nitella spiciformis] gi|44885374|dbj|BAD11930.1| ATP synthase beta subunit [Nitella spiciformis] Length = 340 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|306832293|ref|ZP_07465447.1| V-type ATP synthase, subunit B [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304425732|gb|EFM28850.1| V-type ATP synthase, subunit B [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 464 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 163/334 (48%), Gaps = 13/334 (3%) Query: 41 QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98 Y L + +H G+ GQV+ + D +V + G + + F + S Sbjct: 27 HYNELVEIKLHNGEVRQ--GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGHPLELPVS 84 Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N +GKPIDG L + ++I + + R ++ +TGI ID L Sbjct: 85 EDMVGRIFNGMGKPIDGGPDLIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212 GQ++ VF+GSG+ + L + AR SD V+ + +G E F+ D Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRQT 203 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +SV+ + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKDMHVLVIMTDMTNYCEALREVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P RGYP +++ L L ER G +KG++T + + + D+ PI D Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGY 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L+ L G PP++ L S+SRL DK Sbjct: 324 ITEGQIILSHELYNSGYRPPINVLPSLSRLKDKG 357 >gi|153853533|ref|ZP_01994913.1| hypothetical protein DORLON_00902 [Dorea longicatena DSM 13814] gi|149753688|gb|EDM63619.1| hypothetical protein DORLON_00902 [Dorea longicatena DSM 13814] Length = 457 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/355 (28%), Positives = 173/355 (48%), Gaps = 28/355 (7%) Query: 61 QVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG--- 115 +V+ IN + +V + G +S + F + S GRV + LG+PIDG Sbjct: 43 KVLEINGNDALVQLFESATGINLSNSKVRFLGRSMELGVSEDMLGRVFDGLGRPIDGGPE 102 Query: 116 ---DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 D+ L M ++ P E+ +TG+ ID L GQ++ +F+ SG+ Sbjct: 103 ILPDERRDINGLPMNPAARSYP-------EEFIQTGVSAIDGLNTLVRGQKLPIFSASGL 155 Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 + L + A+ S+ V+ + +G E F+E + + ++V+ V ++ Sbjct: 156 PHANLAAQIAKQAKVRGSNEKFAVVFAAMGITFEESNFFVESFKETGAIDRTVLFVNLAN 215 Query: 226 ESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 + I R P A+T AEY + + D +VL+I+ IT +A ++RE++ E+P RGYP Sbjct: 216 DPAIERISTPRMALTAAEYLAFEKDMHVLVIMTDITNYADALREVSAARKEVPGRRGYPG 275 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 ++++L L ER G +KG+IT + + + D+ PI D I +G I+L+R L Sbjct: 276 YMYTDLATLYERAGRQNGKKGSITLIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYR 335 Query: 345 EGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +G PP+D L S+SRL DK AD ++ L R ++ +++ I G Sbjct: 336 KGIKPPIDVLPSLSRLKDKGIGEGKTRADHANTMNQLFAAYARGKDAKELMTILG 390 >gi|113910816|gb|ABI48140.1| ATPase beta subunit [Lejeunea cavifolia] Length = 455 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 28/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 68 ATLGRIFNVLGEPVD---NLGPVEASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 124 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 125 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKESK 183 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E+ + D+ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 184 VINEENISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF 241 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 242 VQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTD 299 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380 P + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 300 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTL 358 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 359 QRYKELQDIIAILG 372 >gi|288932642|ref|YP_003436702.1| ATP synthase subunit beta [Ferroglobus placidus DSM 10642] gi|288894890|gb|ADC66427.1| ATP synthase, B subunit [Ferroglobus placidus DSM 10642] Length = 462 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 95/314 (30%), Positives = 158/314 (50%), Gaps = 10/314 (3%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRF-RISPSACWCGRVINALGKPID 114 S GQV+ + D+V + I V G R++ S GR+ N G+PID Sbjct: 37 STRRGQVLDTSKDVVVVQVFEGTRGIDTSSTVRFTGDIVRLNVSYDMLGRIFNGSGEPID 96 Query: 115 GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 G + + I + + P R+ + +TGI ID L GQ++ +F+GSG+ Sbjct: 97 GGPKIVPEERREIIGAAINP-YAREYPREFIQTGISAIDGMNTLVRGQKLPIFSGSGLPH 155 Query: 175 STLLSMFARSDCFD------KVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227 + + AR V+ + +G E F++D+ L+++VV + +++ Sbjct: 156 NDIALQVARQAKVRGEGEEFAVVFAAMGITHEEAHYFMQDFERTGALERAVVFLNLANDP 215 Query: 228 PILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 I R + P A+T AE+ + + D +VL+IL +T + ++REI+ E+P RGYP + Sbjct: 216 AIERLLTPRMALTAAEFLAYEYDLHVLVILTDMTNYCEALREISAAREEVPGRRGYPGYM 275 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L + ER G KG IT + + + GD+ PI D I +G IVL+R L +G Sbjct: 276 YTDLATIYERAGRIRGRKGTITQMPILTMPGDDITHPIPDLTGYITEGQIVLSRELHAKG 335 Query: 347 RYPPVDPLASVSRL 360 YPP++ L S+SRL Sbjct: 336 IYPPINVLPSLSRL 349 >gi|149384465|gb|ABR25055.1| ATP synthase beta chain [Sphaeropteris capitata] Length = 394 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 163/314 (51%), Gaps = 26/314 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 8 GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + E Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301 Query: 387 RDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 302 QDIIAI----PGLD 311 >gi|145508197|ref|XP_001440048.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124407254|emb|CAK72651.1| unnamed protein product [Paramecium tetraurelia] Length = 503 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 42/308 (13%) Query: 89 HWGRFRI------SPSACWCGRVINALGKPID---GDDSLGKGDLSMEIMSKVPPAMNRQ 139 H G R+ S G+ ++ LG PI G ++LG+ IM+ + P + Sbjct: 74 HLGDSRVRTIAMDSTEGLIRGQPVSDLGGPITIPVGPETLGR------IMNVIGPIETKI 127 Query: 140 R----------VEKG-----FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS 184 R V++G TGI+V+D+ P G +IG+F G+G+GK+ L+ + Sbjct: 128 RYPIHREAPSFVDQGSGAEILITGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIQELINN 187 Query: 185 DCFDK---VIISLVGERGREVREFIEDYLGDNL------KKSVVVVATSDESPILRKMAP 235 + + VGER RE + + + + + ++ +E P R Sbjct: 188 VAKAHGGYSVFAGVGERTREGNDLYHEMVASGVINLSGGSRCALIYGQMNEPPGARARVG 247 Query: 236 LTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLL 294 LT +T+AEYF +G +VLL +D+I RF + E++ G +P A GY ++ ++L +L Sbjct: 248 LTGLTVAEYFRDEEGKDVLLFIDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDLGQLQ 307 Query: 295 ERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPL 354 ERI + +KG+IT+V ++ V D+ DP + + LD VL+R+L E G YP VDPL Sbjct: 308 ERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRALTELGIYPAVDPL 365 Query: 355 ASVSRLAD 362 S SR+ D Sbjct: 366 DSSSRMMD 373 >gi|257852948|gb|ACV71485.1| ATP synthase beta subunit [Eliea articulata] Length = 497 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 18/310 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+PID D L + I P + F+TGI+V+D+ P Sbjct: 104 GATLGRIFNVLGEPID-DLGLVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG--- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGV 221 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + K + K + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQLKIVGEEHYKTAQRVKQTLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|197132384|gb|ACH47710.1| ATP synthase CF1 beta subunit [Pelargonium cotyledonis] Length = 498 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 220 GVINEQKVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + D+ ++ + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDQHYEIAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|18075915|emb|CAD11914.1| ATP synthase beta subunit [Columellia oblonga] Length = 489 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 109/366 (29%), Positives = 176/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + + G V G + GR Sbjct: 42 KGQDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLMRGMYVIDTGAPLSVPVGGATLGR 101 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +N Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEETRD 388 LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E +D Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDIAQRVKQTLQRYKELQD 395 Query: 389 IRLIGG 394 I I G Sbjct: 396 IIAILG 401 >gi|289651621|ref|ZP_06482964.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. aesculi str. 2250] Length = 174 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 67/153 (43%), Positives = 92/153 (60%) Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF+ LP+L+ER G +E G+ITA +VL +GD+ DPIADS R +LD Sbjct: 4 GEPPATKGYPPSVFARLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLD 63 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAEEG YP +D AS+SR+ S + L R+++TRD+ +G Sbjct: 64 GHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVG 123 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 Y G D D A+ P++ + +Q D S Sbjct: 124 AYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 156 >gi|257852952|gb|ACV71487.1| ATP synthase beta subunit [Vismia rubescens] Length = 490 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 158/306 (51%), Gaps = 22/306 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+PID LG D + + + PPA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---DLGLIDTRTTSPIHRSPPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYL-- 210 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYQEMKES 219 Query: 211 ----GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +N+ +S V V +E P R LTA+TIAEYF +VLL +D+I RF Sbjct: 220 GVINQENIAESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L K + + + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGTEHYETAQRVKQTLQR 397 Query: 383 FEETRD 388 ++E +D Sbjct: 398 YKELQD 403 >gi|239905119|ref|YP_002951858.1| ATP synthase subunit beta [Desulfovibrio magneticus RS-1] gi|239794983|dbj|BAH73972.1| ATP synthase subunit beta [Desulfovibrio magneticus RS-1] Length = 470 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/300 (33%), Positives = 162/300 (54%), Gaps = 13/300 (4%) Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR++N +G+P+D +G D M I P +++ + +TGI+VID+ P Sbjct: 95 GRILNVVGRPVD---EMGPVDSKTFMPIHRAAPAFVDQSTSIQLLETGIKVIDLLIPFPK 151 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNLKK 216 G ++G+F G+G+GK+ +L + +S+ VGER RE + ++ D L K Sbjct: 152 GGKLGLFGGAGVGKTVVLMELINNIAKHHGGLSVFAGVGERTREGNDLYNEFKEADILGK 211 Query: 217 SVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGE 275 + +V +E P R LTA+T AEYF +G +VLL +D+I RF + E++ G Sbjct: 212 ASLVYGQMNEPPGARARVALTALTCAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGR 271 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P A GY ++ ++L L ERI + KG+IT+V +V V D+ DP + S LDG Sbjct: 272 MPSAVGYQPTLGTDLGGLQERI--TSTNKGSITSVQAVYVPADDLTDPAPATTFSHLDGT 329 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLIGG 394 +VL+R +AE G YP VDPL S SR+ D + + ++ ++++ +DI I G Sbjct: 330 LVLSRQIAELGIYPAVDPLDSTSRILDPNVLGGEHYGTAREVQSILQKYKDLQDIIAILG 389 >gi|229488195|gb|ACQ73742.1| ATP synthase [Bornetella nitida] Length = 349 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D G+ + +G + I P ++ F+TGI+V+D+ P Sbjct: 2 LGRIFNVLGEPVDNLGEVATKEG---LPIHRTAPAFVDLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRVIN 118 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 119 EENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ SE+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 179 EVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 236 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + R++E Sbjct: 237 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYNCAQNVKQTLQRYKE 295 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 296 LQDIIAILG 304 >gi|225570040|ref|ZP_03779065.1| hypothetical protein CLOHYLEM_06136 [Clostridium hylemonae DSM 15053] gi|225161510|gb|EEG74129.1| hypothetical protein CLOHYLEM_06136 [Clostridium hylemonae DSM 15053] Length = 460 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 25/362 (6%) Query: 47 DFVVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWC 102 +FV+ ++ +G+++ + D I E +SL + L H +SP Sbjct: 31 EFVID--SSTRKMGRIVELYEDRAVIQVFEGTENMSLQNTHTKLTGHPMEIAVSPD--ML 86 Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGF-KTGIRVIDIFTPLCHG 161 GR N +G+PIDG + D M ++ +P R+ + + +TGI ID T L G Sbjct: 87 GRTFNGIGQPIDGLGPIVSDD--MRDVNGLPLNPVRREYPRNYIRTGISAIDGLTTLIRG 144 Query: 162 QRIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERG--REVREFIEDYLGDN-L 214 Q++ +F+G+G+ L + + D D+ + G G +V EF + ++ + Sbjct: 145 QKLPIFSGNGLPHDQLAAQIVKQASLGDNSDEQFAVVFGAMGVKHDVAEFFQKTFEESGV 204 Query: 215 KKSVVVVATSDESPILRKM-APLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATN 272 V + P++ ++ P A+T+AEY + + + ++L+IL +T FA ++RE++++ Sbjct: 205 ADHVCMFLNLANDPVVERLITPKVALTVAEYLAFEQNMHILVILTDMTSFAEAMREVSSS 264 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE+P +GYP ++SEL + ER G E G++T + + + D+ PI D I Sbjct: 265 KGEIPSRKGYPGYLYSELATIYERAGIIEGANGSVTQLPILTMPNDDITHPIPDLTGYIT 324 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETR 387 +G +VL+RSL + YPP+ L S+SRL A D + L + L + E R Sbjct: 325 EGQVVLDRSLHGQAIYPPISILPSLSRLMKDGIGAGYTREDHQDLANQLFSAYAKVGEAR 384 Query: 388 DI 389 ++ Sbjct: 385 NL 386 >gi|149384471|gb|ABR25058.1| ATP synthase beta chain [Sphaeropteris megalosora] Length = 426 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 107/336 (31%), Positives = 172/336 (51%), Gaps = 29/336 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 40 GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 96 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 156 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + E Sbjct: 157 QNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 216 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 274 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 333 Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 +DI I PG+D + ++ V + I FL Q Sbjct: 334 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 365 >gi|8452711|emb|CAB89950.2| ATP synthase beta subunit [Opilia sp. Chase 1902] Length = 481 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I PP + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPPFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INXXNIAESKVALVYGQMNEPPGARMRXGLTALTMAEYFRDINEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|5758884|gb|AAD50858.1| ATP synthase beta subunit [Hedychium flavum] Length = 496 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 110/365 (30%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G D++ I GR Sbjct: 50 KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSIPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D S I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIELDTKFSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + NVLL +D+I RF + E++ Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|288906246|ref|YP_003431468.1| V-type sodium ATP synthase, subunit B [Streptococcus gallolyticus UCN34] gi|325979219|ref|YP_004288935.1| V-type H+-transporting ATPase subunit B [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732972|emb|CBI14551.1| Putative V-type sodium ATP synthase, subunit B [Streptococcus gallolyticus UCN34] gi|325179147|emb|CBZ49191.1| V-type H+-transporting ATPase subunit B [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 464 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 97/334 (29%), Positives = 163/334 (48%), Gaps = 13/334 (3%) Query: 41 QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98 Y L + +H G+ GQV+ + D +V + G + + F + S Sbjct: 27 HYNELVEIKLHNGEVRQ--GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGHPLELPVS 84 Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N +GKPIDG L + ++I + + R ++ +TGI ID L Sbjct: 85 EDMVGRIFNGMGKPIDGGPDLIP-EKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTL 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212 GQ++ VF+GSG+ + L + AR SD V+ + +G E F+ D Sbjct: 144 VRGQKLPVFSGSGLPHNELAAQIARQATVLNSDENFAVVFAAMGITFEEAEFFMNDLRQT 203 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +SV+ + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTTAEYLAYEKDMHVLVIMTDMTNYCEALREVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P RGYP +++ L L ER G +KG++T + + + D+ PI D Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGY 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L+ L G PP++ L S+SRL DK Sbjct: 324 ITEGQIILSHELYNSGYRPPINVLPSLSRLKDKG 357 >gi|14718224|gb|AAK72850.1| ATP synthase beta subunit [Siphonodon celastrineus] Length = 485 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKFSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|6688527|emb|CAB65168.1| ATP synthase beta subunit [Solanum lycopersicum] Length = 498 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 111/370 (30%), Positives = 180/370 (48%), Gaps = 31/370 (8%) Query: 49 VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99 +V QG+ D++GQ I + ++ V + E ++ G V G + Sbjct: 47 LVVQGR--DSVGQPINVACEVQQLLGNNRVRAVAMSATEGLTRGMAVIDTGAPISVPVGG 104 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|62902810|gb|AAY19320.1| ATP synthase beta subunit [Empleuridium juniperinum] Length = 488 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|62085206|gb|AAX63007.1| ATP synthase beta subunit [Tripterygium regelii] Length = 487 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|119350493|gb|ABL63197.1| AtpB [Geminella minor] Length = 389 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 28/311 (9%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + + I P ++ F+TGI+V+D+ P Sbjct: 36 GRIFNVLGEPVD---NLGPVESKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 92 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 93 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 151 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E+ +G++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 152 EENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 209 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ SE+ L ERI + + G+IT++ +V V D+ DP Sbjct: 210 GSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 267 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + R+ Sbjct: 268 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKQTLQRY 326 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 327 KELQDIIAILG 337 >gi|42559018|gb|AAS20195.1| ATP synthase beta subunit [Cyperus papyrus] Length = 468 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 154/310 (49%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID +LG D+S I P + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPID---NLGPVDISTISPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP V PL S S + + DE + + R++ Sbjct: 318 ATTFAHLDATTVLSRPLAAKGIYPAVSPLDSTSTMLQPSIVGDEHYETAQRVKQTSQRYK 377 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 378 ELQDIIAILG 387 >gi|21684899|emb|CAD11576.1| ATP synthase beta subunit [Distichia acicularis] Length = 465 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 152/306 (49%), Gaps = 20/306 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S + I P + +TGI+V+D+ Sbjct: 98 GATLGRIFNVLGQPID---NLGPVDTSTTLPIHRSAPAFIELDTKLSILETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDY 209 P G +IG+F G+G+GK+ L+ + +S+ VGER RE +E E Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKGHGGVSVFAGVGERTREGNDLYKEMKESG 214 Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 215 VINEKKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQKDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP V+PL S S + E + + R+ Sbjct: 333 PATTFAHLDATTVLSRPLAAKGIYPAVNPLDSTSTILQSNIVGKEHYETAQRVKQTSQRY 392 Query: 384 EETRDI 389 +E +D+ Sbjct: 393 KELQDV 398 >gi|21684877|emb|CAD11565.1| ATP synthase beta subunit [Chorizandra enodis] Length = 487 Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 156/317 (49%), Gaps = 20/317 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIR 150 R+ GR+ N LG+P+D +LG D S I P + F+TGI+ Sbjct: 92 LRVPVGGVTLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFVQLDTKLSIFETGIK 148 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYI 208 Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDS 258 NL +S V V +E P R LTA+T+AEYF +VLL +D+ Sbjct: 209 EMKESGVINEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDN 268 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +E+ L ERI + +KG IT++ +V V D Sbjct: 269 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPAD 326 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377 + DP + + LD VL+R+LA +G YP V PL S S + +E + + Sbjct: 327 DLTDPAPATTFAHLDATTVLSRALAAKGIYPAVSPLDSTSTMLQPNIVGEEHYETAQEVK 386 Query: 378 HLIHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 387 QTLQRYKELQDIIAILG 403 >gi|163813969|ref|ZP_02205363.1| hypothetical protein COPEUT_00122 [Coprococcus eutactus ATCC 27759] gi|158450839|gb|EDP27834.1| hypothetical protein COPEUT_00122 [Coprococcus eutactus ATCC 27759] gi|295094162|emb|CBK83253.1| Archaeal/vacuolar-type H+-ATPase subunit B [Coprococcus sp. ART55/1] Length = 456 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 95/333 (28%), Positives = 164/333 (49%), Gaps = 29/333 (8%) Query: 98 SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 S GRV + LG+PIDG D+ L M ++ P+ + +TGI Sbjct: 82 SEDMLGRVFDGLGRPIDGGPEILPDERRDINGLPMNPAARNYPS-------EFIQTGISA 134 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREF 205 ID L GQ++ +F+ SG+ S L + AR +D V+ + +G E F Sbjct: 135 IDGLNTLVRGQKLPIFSASGLPHSQLAAQIARQAKVRGTDEPFAVVFAAMGITFEEANFF 194 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263 E + + ++V+ + +++ + R P A+T AEY + K +VL+IL IT +A Sbjct: 195 TESFKETGAIDRTVLFINLANDPAVERIATPRMALTAAEYLAFEKNMHVLVILTDITNYA 254 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 ++RE++ E+P RGYP ++++L L ER G + + G+IT + + + D+ P Sbjct: 255 DALREVSAARKEVPGRRGYPGYMYTDLATLYERAGRQKGKNGSITMIPILTMPEDDKTHP 314 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIH 381 I D I +G I+L+R L +G PP+D L S+SRL DK + + S++ L Sbjct: 315 IPDLTGYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGTGEGKTRGDHASTMNQLFA 374 Query: 382 RFEETRDIRLIGGYRPGVDLILDKAVHQVPIIY 414 + +D + + + ++ + A+ + IIY Sbjct: 375 AYSRGKDAKEL------MTILGESALSDIDIIY 401 >gi|152995978|ref|YP_001340813.1| F0F1 ATP synthase subunit beta [Marinomonas sp. MWYL1] gi|190358210|sp|A6VWP9|ATPB1_MARMS RecName: Full=ATP synthase subunit beta 1; AltName: Full=ATP synthase F1 sector subunit beta 1; AltName: Full=F-ATPase subunit beta 1 gi|150836902|gb|ABR70878.1| ATP synthase F1, beta subunit [Marinomonas sp. MWYL1] Length = 489 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 152/293 (51%), Gaps = 11/293 (3%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVE-KGFKTGIRVIDIFTPLCHGQ 162 R+ + G ID D+ D+ + PP + R+ + + F+TGI+VID+ PL G Sbjct: 96 RMFDVFGNTIDKKDA--PIDVEWRSVHNEPPPLARRSTKTEVFETGIKVIDVLMPLERGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKKSVV 219 + G+F G+G+GK+ LL+ + +S+ +GER RE E + + S+V Sbjct: 154 KAGLFGGAGVGKTVLLTEMIHNMVGQHAGVSIFCGIGERCREGEELYREMKEAGVLDSMV 213 Query: 220 VV-ATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 ++ +E P R A+T+AEYF + +VLL++D+I RF + E++ G++P Sbjct: 214 MMFGQMNEPPGARFRVGHAALTMAEYFRDDEHRDVLLLMDNIFRFIQAGMEVSGLMGQMP 273 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ +EL +L ERI + G IT++ +V V D+ DP A S L IV Sbjct: 274 ARLGYQPTMGTELSQLEERI--ANTGSGAITSIQAVYVPADDFTDPAAVHTFSHLSASIV 331 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R A EG YP +DPL S S++A + L + + ++ E +DI Sbjct: 332 LSRKRASEGLYPAIDPLQSSSKMATPSIIGKRHYDLAQEIRRTLAQYSELKDI 384 >gi|19033085|gb|AAL83527.1|AF408799_1 ATP synthase beta subunit [Zygnema peliosporum] Length = 402 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D LG + EI P F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---ELGPVNANTKFEIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W + + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGVEHYDIAQGVKQTLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|21684921|emb|CAD11587.1| ATP synthase beta subunit [Xyris capensis] Length = 441 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID +LG D S I P + + F+TGI+V+D+ P Sbjct: 56 LGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPTFVQLETRLXIFETGIKVVDLLAPYR 112 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 113 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVIN 172 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 173 EKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 232 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 233 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 290 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S L + + + + + R++E Sbjct: 291 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGTEHYETAQRVKQTLQRYKEL 350 Query: 387 RDIRLIGG 394 +D+ I G Sbjct: 351 QDMIAILG 358 >gi|3850916|gb|AAC72150.1| ATP synthase beta subunit [Conospermum mitchellii] Length = 488 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + H + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKHTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|284039966|ref|YP_003389896.1| ATP synthase F1 subunit beta [Spirosoma linguale DSM 74] gi|283819259|gb|ADB41097.1| ATP synthase F1, beta subunit [Spirosoma linguale DSM 74] Length = 508 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/329 (30%), Positives = 157/329 (47%), Gaps = 39/329 (11%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+ IDG + + I P + + TGI+VID+ P G Sbjct: 95 GRLFNVVGEAIDGIPQPTTTGVGLPIHRSAPKFEDLATSTEVLFTGIKVIDLLEPYAKGG 154 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIEDYL---GD 212 +IG+F G+G+GK+ L+ + +S+ VGER RE +RE IE + GD Sbjct: 155 KIGLFGGAGVGKTVLIQELINNIAKAYAGLSVFAGVGERTREGNDLLREMIEAGIIRYGD 214 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF-----S 246 K S+ V +E P R L+ +TIAE+F Sbjct: 215 AFKHSMEEGGWDLTKVDLQEMTNSQATFVFGQMNEPPGARARVALSGLTIAEHFRDGDGE 274 Query: 247 SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 +G ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + ++G+ Sbjct: 275 GEGRDILFFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGVMQERI--TSTKRGS 332 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT+V +V V D+ DP + + LD VL+R ++E G YP VDPL S SR+ Sbjct: 333 ITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKISELGIYPAVDPLDSTSRILSAEIL 392 Query: 367 ADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 DE + ++ R++E +DI I G Sbjct: 393 GDEHYNTAQRVKEILQRYKELQDIIAILG 421 >gi|14718134|gb|AAK72806.1| ATP synthase beta subunit [Mitchella repens] Length = 478 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 158/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPID---NLGPXDTRTTAPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELITNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + ++ + R++ Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQNVKQTLQRYK 387 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 388 ELQDIIAILG 397 >gi|62085225|gb|AAX63015.1| ATP synthase beta subunit [Gymnosporia arbutifolia] Length = 484 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|62085212|gb|AAX63009.1| ATP synthase beta subunit [Celastrus scandens] Length = 482 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|222084091|ref|YP_002519544.1| ATP synthase CF1 beta chain [Keteleeria davidiana] gi|220983643|dbj|BAH11409.1| ATP synthase CF1 beta chain [Keteleeria davidiana] Length = 487 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 164/319 (51%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVINEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDANEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD V +R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|149384669|gb|ABR25143.1| ATP synthase beta chain [Lomariopsis sorbifolia] Length = 426 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + ++ I P F+TGI+V+D+ P Sbjct: 39 LGRIFNVLGEPVD---NLGPVQSSVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGRE----VREFIEDYLGD 212 G +IG+F G+G+GK+ L++ + + VGER RE E E + D Sbjct: 96 RGGKIGLFGGAGVGKTVLITELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVID 155 Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + R++E Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQAVKQTLQRYKE 332 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 333 LQDIIAILG 341 >gi|332298328|ref|YP_004440250.1| V-type ATP synthase beta chain [Treponema brennaborense DSM 12168] gi|332181431|gb|AEE17119.1| V-type ATP synthase beta chain [Treponema brennaborense DSM 12168] Length = 465 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 107/368 (29%), Positives = 185/368 (50%), Gaps = 22/368 (5%) Query: 40 SQYVCLGDFVVHQGKNSDN-LGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRIS 96 S+ V G+ V + ++ D G+VI I+ + +V I G ++ + F + Sbjct: 22 SENVFYGEIVAVRSRSGDKRTGRVIDISEEYAVVQIFGSTTGIDLDQTRVEFLDTPMELR 81 Query: 97 PSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV--EKGFKTGIRVIDI 154 GR+ N LGKPIDG + S +I P RV +TG+ ID Sbjct: 82 VGEGLLGRIFNGLGKPIDGYPDIVS---SKKINVNGNPINPYARVYPRDFIQTGVSSIDG 138 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFARS----DCFDKVIISLVGERGR-EVREFIEDY 209 L GQ++ +F+G+G+ + L + R + ++ ++ G + +V +F + Sbjct: 139 MNTLIRGQKLPIFSGNGLPHNRLAAQIIRQAKILNADEQFVMVFAGMGIKYDVAQFFINT 198 Query: 210 LGDN--LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266 ++ L + V+ + +D I R + P A+T AEY + KG +VL++L +T + ++ Sbjct: 199 FEESGVLSRVVMFQSLADAPSIERIITPRCALTAAEYLAYEKGMHVLVVLTDMTNYCEAL 258 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 REI+T GE+P +GYP ++S+L L ER G + KG+IT + + + D+ + PI D Sbjct: 259 REISTTRGEVPGRKGYPGYLYSDLAELYERAGKIKGSKGSITQIPILTMPNDDISHPIPD 318 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHR 382 I +G IVL+R ++++G YPPV L S+SRL + + ++ K VSS L Sbjct: 319 LTGYITEGQIVLDREMSQKGMYPPVAGLPSLSRLMKDGIGEGMTREDHKDVSS--QLFAA 376 Query: 383 FEETRDIR 390 + + + IR Sbjct: 377 YSKVKSIR 384 >gi|119350497|gb|ABL63199.1| AtpB [Geminella sp. SAG 20.84] Length = 390 Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 28/311 (9%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + + I P ++ F+TGI+V+D+ P Sbjct: 37 GRIFNVLGEPVD---NLGPVESKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 93 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 94 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 152 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E+ +G++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 153 EENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 210 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ SE+ L ERI + + G+IT++ +V V D+ DP Sbjct: 211 GSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 268 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + R+ Sbjct: 269 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKQTLQRY 327 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 328 KELQDIIAILG 338 >gi|269798931|gb|ACZ43765.1| ATP synthase beta subunit [Corchoropsis crenata] Length = 473 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 88 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFVQLDTKLSIFETGIKVVDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 203 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E LG++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 204 GVINEQNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 261 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 262 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 319 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 320 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 379 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 380 QRYKELQDIIAILG 393 >gi|14718163|gb|AAK72820.1| ATP synthase beta subunit [Paropsia madagascariensis] Length = 477 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 110/365 (30%), Positives = 173/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + E ++ G V G + GR Sbjct: 37 KGRDTIGQQINVACEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 96 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID LG D + I P + F+TGI+V+D+ P G Sbjct: 97 IFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTRLSIFETGIKVVDLLAPYRRGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +N Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEEN 213 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 214 ITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 273 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 274 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 331 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + E + S+ + R++E +DI Sbjct: 332 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGKEHYETAQSVKQTLQRYKELQDI 391 Query: 390 RLIGG 394 I G Sbjct: 392 ITILG 396 >gi|6689235|emb|CAB65397.1| ATP synthase beta subunit [Symphoricarpos albus] Length = 498 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 107/366 (29%), Positives = 171/366 (46%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D GQ I + ++ V + E ++ G V G + GR Sbjct: 50 KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTQLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 225 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF NVLL +D+I RF + E+ Sbjct: 226 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 285 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 286 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 343 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + + + + + R++E +D Sbjct: 344 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGQNHYETAQRVKQTLQRYKELQD 403 Query: 389 IRLIGG 394 I I G Sbjct: 404 IIAILG 409 >gi|46360689|gb|AAS89126.1| ATP synthase beta subunit [Lepicolea attenuata] Length = 382 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 103/310 (33%), Positives = 162/310 (52%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 2 SGRNFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G +IG F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 59 RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 117 Query: 212 D--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 D N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 118 DEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAG 177 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 178 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 235 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R++ Sbjct: 236 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQRYK 294 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 295 ELQDIIAILG 304 >gi|257484914|ref|ZP_05638955.1| flagellum-specific ATP synthase [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 171 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 67/153 (43%), Positives = 92/153 (60%) Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 GE P +GYP SVF+ LP+L+ER G +E G+ITA +VL +GD+ DPIADS R +LD Sbjct: 1 GEPPATKGYPPSVFARLPKLVERAGNAEAGGGSITAFYTVLSEGDDQQDPIADSARGVLD 60 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIG 393 GHIVL+R LAEEG YP +D AS+SR+ S + L R+++TRD+ +G Sbjct: 61 GHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQQTRDLISVG 120 Query: 394 GYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSS 426 Y G D D A+ P++ + +Q D S Sbjct: 121 AYVAGGDRETDMAIALHPVLVRYQRQGLRDNES 153 >gi|115391911|ref|YP_778499.1| ATP synthase CF1 beta subunit [Jasminum nudiflorum] gi|122164964|sp|Q06RC2|ATPB_JASNU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|110456232|gb|ABG74637.1| ATPase beta subunit [Jasminum nudiflorum] Length = 498 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E K+ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|7688417|emb|CAB89734.1| ATP synthase beta subunit [Verbena scabrido-glandulosa] Length = 442 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 62 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 118 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 119 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 178 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 179 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 238 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 239 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 296 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 297 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 356 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 357 KELQDIIAILG 367 >gi|89280642|ref|YP_514859.1| ATP synthase CF1 beta chain [Solanum lycopersicum] gi|118573750|sp|Q2MI93|ATPB_SOLLC RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|84371990|gb|ABC56307.1| ATP synthase CF1 beta subunit [Solanum lycopersicum] gi|89241678|emb|CAJ32400.1| ATP synthase CF1 beta chain [Solanum lycopersicum] Length = 498 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 111/370 (30%), Positives = 180/370 (48%), Gaps = 31/370 (8%) Query: 49 VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99 +V QG+ D++GQ I + ++ V + E ++ G V G + Sbjct: 47 LVVQGR--DSVGQPINVACEVQQLLGNNRVRAVAMSATEGLTRGMAVIDTGAPISVPVGG 104 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|44885344|dbj|BAD11915.1| ATP synthase beta subunit [Nitella tumulosa] gi|44885346|dbj|BAD11916.1| ATP synthase beta subunit [Nitella tumulosa] Length = 340 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|119350499|gb|ABL63200.1| AtpB [Geminella sp. SAG 54.81] Length = 392 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 161/311 (51%), Gaps = 28/311 (9%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + + I P ++ F+TGI+V+D+ P Sbjct: 39 GRIFNVLGEPVD---NLGPVESKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRR 95 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI---------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 96 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVIN 154 Query: 207 EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 E+ +G++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 EENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 212 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ SE+ L ERI + + G+IT++ +V V D+ DP Sbjct: 213 GSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAP 270 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + R+ Sbjct: 271 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKQTLQRY 329 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 330 KELQDIIAILG 340 >gi|7708666|emb|CAB89993.1| ATP synthase beta subunit [Styrax japonicus] Length = 478 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P + F+TGI+V+D+ Sbjct: 90 GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 324 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 385 KELQDIIAILG 395 >gi|299830551|ref|YP_003734999.1| ATP synthase CF1 beta subunit [Durinskia baltica] gi|297384915|gb|ADI40214.1| ATP synthase CF1 beta subunit [Durinskia baltica] Length = 475 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 93/307 (30%), Positives = 155/307 (50%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N +G+P+D ++ + ++ I P + F+TGI+V+D+ P G Sbjct: 91 LGRIFNVIGEPVDEQGAVSVNE-TLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYRRG 149 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL--- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + E+ + Sbjct: 150 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVINS 208 Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 209 KNFSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAGSE 268 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP + Sbjct: 269 VSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPATT 326 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + S ++ ++ + R++E + Sbjct: 327 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVSETHYEVAETVKETLQRYKELQ 386 Query: 388 DIRLIGG 394 DI I G Sbjct: 387 DIIAILG 393 >gi|184127867|gb|ACC67833.1| ATP synthase beta chain [Marattia melanesica] Length = 399 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 163/310 (52%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D+ + + K PA + + F+TGI+V+D+ P Sbjct: 12 LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 69 RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 127 Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 128 NQENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAG 187 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 188 SEVSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 245 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 246 TTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 304 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 305 ELQDIIAILG 314 >gi|20467395|gb|AAL27828.1| ATPase beta subunit [Pinus mugo] Length = 432 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 103/319 (32%), Positives = 161/319 (50%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P F+TGI+V+D+ Sbjct: 64 GATLGRIFNVLGEPVD---NLGPVDACITSPIHRPAPAFTELDTKLSIFETGIKVVDLLA 120 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 121 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 179 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 180 GVIDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 239 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 240 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 297 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + D VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 298 APATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQ 356 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 357 RYKELQDIIAI----PGLD 371 >gi|62902806|gb|AAY19318.1| ATP synthase beta subunit [Canotia holacantha] Length = 488 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|44885348|dbj|BAD11917.1| ATP synthase beta subunit [Nitella gracilens] gi|44885350|dbj|BAD11918.1| ATP synthase beta subunit [Nitella gracilens] gi|44885352|dbj|BAD11919.1| ATP synthase beta subunit [Nitella gracilens] gi|44885354|dbj|BAD11920.1| ATP synthase beta subunit [Nitella gracilens] gi|44885356|dbj|BAD11921.1| ATP synthase beta subunit [Nitella gracilens] Length = 340 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + + PA + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTELDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|307277434|ref|ZP_07558526.1| ATP synthase [Enterococcus faecalis TX2134] gi|306505699|gb|EFM74877.1| ATP synthase [Enterococcus faecalis TX2134] Length = 458 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 160/320 (50%), Gaps = 21/320 (6%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ IN D + I++ D + H +SP GRV + LG+ D Sbjct: 42 GQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPD--MMGRVFDGLGRLKDN 99 Query: 116 DDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 L K D++ E+++ V R ++ +TGI ID L GQ++ VF+ SG+ Sbjct: 100 GPELLPEKKLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGL 155 Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 L + AR S+ V+ + +G +E F+ED+ + +SV+ + ++ Sbjct: 156 PHKELAAQIARQANVLNSEEEFAVVFAAIGITFKEAEYFMEDFRQTGAIDRSVLFMNLAN 215 Query: 226 ESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 + I R P A+T AEY + KG +VL+I+ +T + ++REI+ E+P RGYP Sbjct: 216 DPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPG 275 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 +++ L L ER G KG++T + + + ++ PI D I +G I+L+R L + Sbjct: 276 YLYTNLATLYERAGRIRGSKGSVTQIPILTMPEEDKTHPIPDLTGYITEGQIILSRELYK 335 Query: 345 EGRYPPVDPLASVSRLADKA 364 G PP+D L S+SRL DK Sbjct: 336 SGIQPPIDVLPSLSRLKDKG 355 >gi|309322105|ref|YP_003933921.1| ATP synthase CF1 beta subunit [Erodium texanum] gi|197132372|gb|ACH47704.1| ATP synthase CF1 beta subunit [Erodium texanum] gi|300069198|gb|ADJ66320.1| ATP synthase CF1 beta subunit [Erodium texanum] Length = 495 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 101 GSTLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPDFIELDTKFSIFETGIKVVDLLA 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 216 Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 217 GVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 276 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 277 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 334 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R Sbjct: 335 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQR 394 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 395 YKELQDIIAILG 406 >gi|164566157|gb|ABY61221.1| ATP synthase beta subunit [Marattia weinmanniifolia] Length = 394 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAILG 309 >gi|34499992|gb|AAQ73578.1| ATP synthase beta subunit [Gallibacterium genomosp. 1] Length = 444 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 8/298 (2%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N LG+PID +G+ + I P + + +TGI+VID+ P G Sbjct: 82 LGRIMNVLGEPIDERGPIGEKE-RWSIHRAAPSYEEQANSTELLETGIKVIDLVCPFAKG 140 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGREVREFIEDYLGDN-LKKS 217 ++G+F G+G+GK+ + R+ + + + VGER RE +F + N L K Sbjct: 141 GKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMQESNVLDKV 200 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R LT +T+AE F +G +VL +D+I R+ + E++ G +P Sbjct: 201 SLVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLFFVDNIYRYTRAGTEVSALLGRMP 260 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 A GY ++ E+ L ERI + + G+IT+V +V V D+ DP + + LD +V Sbjct: 261 SAVGYQPTLAEEMGVLQERI--TSNKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVV 318 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 L+R +A G Y L S SR D E V+ + ++ R++E +DI I G Sbjct: 319 LSRQIASLGIYLRWIRLDSTSRQLDPQVVGQEHYDVARGVQGILQRYKELKDIIAILG 376 >gi|169824770|ref|YP_001692381.1| V-type ATP synthase subunit B [Finegoldia magna ATCC 29328] gi|302380260|ref|ZP_07268732.1| ATP synthase ab C-terminal domain protein [Finegoldia magna ACS-171-V-Col3] gi|167831575|dbj|BAG08491.1| V-type sodium ATP synthase subunit B [Finegoldia magna ATCC 29328] gi|302312043|gb|EFK94052.1| ATP synthase ab C-terminal domain protein [Finegoldia magna ACS-171-V-Col3] Length = 462 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 93/316 (29%), Positives = 164/316 (51%), Gaps = 13/316 (4%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117 G+V+ I+ D+ + + I+L + + GR + S GRV + LG+PID Sbjct: 42 GRVVEIDHDVAMVQVFEGTKGINLQETTVRFLGRPLELGVSEDMIGRVFDGLGRPIDNGP 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + D ++I ++R + +TG+ ID L GQ++ +F+GSG+ + L Sbjct: 102 KIIPED-KVDINGSSINPVSRDYPSEFIETGVSTIDGLNTLVRGQKLPIFSGSGLPHNKL 160 Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + AR D F V+ + +G E + FI D+ + ++V+ + +D+ I Sbjct: 161 AAQIARQAKVLGKDDKF-AVVFAAMGITFEEAQYFIGDFNKTGAIDRAVLFMNLADDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AE+ + KG +VL+I+ +T +A ++RE++ E+P RGYP +++ Sbjct: 220 ERLSTPKMALTCAEFLAFEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L L ER G +G+IT + + + D+ PI D I +G I+L+R L ++G Sbjct: 280 DLATLYERAGKIVGREGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKKGYE 339 Query: 349 PPVDPLASVSRLADKA 364 PP++ + S+SRL DK Sbjct: 340 PPINAIPSLSRLKDKG 355 >gi|6689309|emb|CAB65431.1| ATP synthase beta subunit [Billardiera heterophylla] Length = 498 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 176/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + E ++ G V G + GR Sbjct: 50 KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGTTLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPIDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 +++S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 IEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|8452756|emb|CAB89994.1| ATP synthase beta subunit [Swietenia macrophylla] Length = 477 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D L+ + K PA + + F+TGI+V+D+ Sbjct: 90 GATLGRIFNVLGEPVD---NLGPVDTLTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 385 KELQDIIAILG 395 >gi|62085221|gb|AAX63013.1| ATP synthase beta subunit [Elaeodendron orientale] Length = 486 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 93 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 149 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 327 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 388 KELQDIIAILG 398 >gi|62085161|gb|AAX62985.1| ATP synthase beta subunit [Micrantheum hexandrum] Length = 488 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 110/371 (29%), Positives = 180/371 (48%), Gaps = 31/371 (8%) Query: 48 FVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPS 98 V+ +G+NS GQ I + ++ V + E + G +++ G + Sbjct: 39 LVIVKGRNST--GQQINVTCEVQQLLGNNRVRTVAMSATEGLMRGMEVIDTGGPLSVPVG 96 Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + + F+TGI+V+D+ Sbjct: 97 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLEIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211 P G +IG+F G+G+GK+ L+ + + + VGER RE + ++ Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKEYGGVSVFGGVGERTREGNDLYKEMKQSR 213 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 273 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + E + S+ + R+ Sbjct: 332 PATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTSTMLQPNIVGKEHYETAQSVKQTLQRY 391 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 392 KELQDIIAILG 402 >gi|130750316|gb|ABO32263.1| ATP synthase subunit B [Centrolepis monogyna] Length = 424 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 158/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D+S I P ++ F+TGI+V+D+ P Sbjct: 35 VTLGRIFNVLGEPVD---NLGPVDISATSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 91 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 92 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYIEMKESG 150 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 151 VINEKDLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRF 208 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + +K +IT++ +V V D+ D Sbjct: 209 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTD 266 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 267 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQ 326 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 327 RYKELQDIIAILG 339 >gi|62902831|gb|AAY19330.1| ATP synthase beta subunit [Peripterygia marginata] Length = 485 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 92 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 209 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|62085215|gb|AAX63010.1| ATP synthase beta subunit [Dapania racemosa] Length = 486 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|269798927|gb|ACZ43763.1| ATP synthase beta subunit [Corchoropsis psilocarpa] Length = 474 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFVQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 204 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E LG++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 205 GVINEQNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 262 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 263 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 320 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 321 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 380 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 381 QRYKELQDIIAILG 394 >gi|150035731|gb|ABR67211.1| ATP synthase beta subunit [Anomochloa marantoidea] Length = 479 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N ++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 202 VINEKNFEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|89574023|gb|ABD77237.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Lepus europaeus] Length = 410 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 95/306 (31%), Positives = 157/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P + ++ TGI+V+ + P Sbjct: 49 LGRIMNVIGEPIDERGPIKTKQFAA-IHAEAPEFIEMSVEQEILVTGIKVVYLLAPYAKV 107 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 ++ +F G+G+GK+ L+ + A++ V VGER RE E IE L Sbjct: 108 GKLALFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 166 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 167 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 226 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 227 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 284 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRD 388 + LD VL+R++AE G YP VDPL S SR+ D E V+ + ++ ++ +D Sbjct: 285 AHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQD 344 Query: 389 IRLIGG 394 I I G Sbjct: 345 IIAILG 350 >gi|12004111|gb|AAG43895.1|AF213764_1 ATP synthase beta subunit [Myrsine africana] Length = 486 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + D Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMDXXES 219 Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 220 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFMDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|28188339|gb|AAL92549.1| ATP synthase beta subunit [Coleochaete divergens] Length = 401 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D ++ + + + PA + + F+TGI+V+D+ P Sbjct: 37 ATLGRIFNVLGEPVD---ELGPVDSTITLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 94 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 153 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 154 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 214 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W + + + + R+ Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 330 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 331 KELQDIIAILG 341 >gi|62085210|gb|AAX63008.1| ATP synthase beta subunit [Celastrus orbiculatus] Length = 486 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|156530093|gb|ABU75143.1| AtpB [Cneorum tricoccon] Length = 480 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIXKSAPAFIQLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 203 VINEQNLAESKVALVYGQMNEPPGARMRXGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 380 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 381 KELQDIIAILG 391 >gi|14718038|gb|AAK72760.1| ATP synthase beta subunit [Durio zibethinus] Length = 478 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 92 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 209 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + + + + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|4063544|gb|AAC98330.1| ATP synthase beta subunit [Floerkea proserpinacoides] Length = 456 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D+ + I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|11908164|gb|AAD11742.2| ATP synthase beta subunit [Swietenia macrophylla] Length = 477 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D L+ + K PA + + F+TGI+V+D+ Sbjct: 90 GATLGRIFNVLGEPVD---NLGPVDTLTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 384 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 385 KELQDIIAILG 395 >gi|62902841|gb|AAY19335.1| ATP synthase beta subunit [Ruptiliocarpon caracolito] Length = 485 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 93 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIPLDTKLSIFETGIKVVDLLA 149 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 210 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 327 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 387 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 388 KELQDIIAILG 398 >gi|62085131|gb|AAX62971.1| ATP synthase beta subunit [Euphronia guianensis] Length = 497 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/306 (33%), Positives = 154/306 (50%), Gaps = 22/306 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---ELGPVDSRTTYPIHRPAPAFIQLATKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESR 220 Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G LP A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRLPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L K + ++ R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPDIVGKKHYKTAQRVKQILQRY 398 Query: 384 EETRDI 389 +E +D+ Sbjct: 399 KELQDV 404 >gi|58040602|ref|YP_192566.1| F0F1 ATP synthase subunit alpha [Gluconobacter oxydans 621H] gi|81672590|sp|Q5FNY6|ATPA2_GLUOX RecName: Full=ATP synthase subunit alpha 2; AltName: Full=ATP synthase F1 sector subunit alpha 2; AltName: Full=F-ATPase subunit alpha 2 gi|58003016|gb|AAW61910.1| ATP synthase alpha chain [Gluconobacter oxydans 621H] Length = 507 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 98/336 (29%), Positives = 167/336 (49%), Gaps = 11/336 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV++ LG+P+DG + + + + P ++R+ V + +TG ID P+ GQ Sbjct: 107 GRVVDPLGRPLDGKGPV-EAETWFPVERPAPAIIDRELVTEPVQTGTLAIDTLFPIGRGQ 165 Query: 163 RIGVFAGSGIGKSTLL--SMFARSDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVV 219 R + GK+T+ ++ A+ + +G++ V+ IE N + ++ Sbjct: 166 RELIVGDRATGKTTIAVDAILAQKSNDMICVYVAIGQKTSSVQRVIETIRTRGNPDRCII 225 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVA 279 VVA E+P L +AP A+++AEYF +G + LL++D +++ A + RE++ +G P Sbjct: 226 VVARPAEAPGLCWIAPFAAMSMAEYFRDRGQHALLVIDDLSKHAATHREVSLLTGRPPGR 285 Query: 280 RGYPTSVFSELPRLLERIG--PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 YP +F RLLER + K G++TA+ + N + I ++ SI DG IV Sbjct: 286 EAYPGDIFYVHARLLERAAKLSAAKGGGSLTALPVAETEAGNLSAYIPTNLISITDGQIV 345 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRP 397 LNR+L ++G+ P VD SVSR+ A S + V +L +F E GG Sbjct: 346 LNRTLFDQGQKPAVDVGVSVSRVGGAAQSPILRSSVGTLRLDYAQFIELEAFTRFGGL-- 403 Query: 398 GVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQEI 433 D + + + + I L+Q P + D+ QE+ Sbjct: 404 -PDTHVRQQLARGACIRATLRQGPH--APLDLLQEV 436 >gi|300866628|ref|ZP_07111316.1| ATP synthase subunit beta [Oscillatoria sp. PCC 6506] gi|300335400|emb|CBN56476.1| ATP synthase subunit beta [Oscillatoria sp. PCC 6506] Length = 482 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N +G+P+D +G + + I P + F+TGI+VID+ P Sbjct: 95 ATLGRIFNVIGEPVDNLGPVGASE-RLPIHRSAPAFTELETKPSVFETGIKVIDLLAPYR 153 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ L++ A++ V + ER RE +E IE + Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELVNNIAKAHGGVSVFGGVG-ERTREGNDLYKEMIESGVI 212 Query: 212 DNLKKS----VVVVATSDESPILRKMAPLTAVTIAEYFS--SKGDNVLLILDSITRFAHS 265 + +S +V +E P R L+A+ +AEYF SK D VLL +D+I RF + Sbjct: 213 NEEDRSKSKIALVYGQMNEPPGARMRVGLSALAMAEYFRDVSKQD-VLLFIDNIFRFVQA 271 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +++ L ERI + ++G+IT+V +V V D+ DP Sbjct: 272 GSEVSALLGRMPSAVGYQPTLGTDMGDLQERI--TSTKEGSITSVQAVYVPADDLTDPAP 329 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-WSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + A D + ++ + R++ Sbjct: 330 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPAVVGEDHYAIARAVQATLQRYK 389 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 390 ELQDIIAILG 399 >gi|2655155|gb|AAB87887.1| ATP synthase beta subunit [Drosophila subobscura] Length = 323 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 89/260 (34%), Positives = 139/260 (53%), Gaps = 16/260 (6%) Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE-- 201 GI+V+D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 1 GIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGN 59 Query: 202 --VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLI 255 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 60 DLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLF 119 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V Sbjct: 120 IDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYV 177 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS- 374 D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 178 PADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVAR 237 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 238 GVQKILQDYKSLQDIIAILG 257 >gi|44885380|dbj|BAD11933.1| ATP synthase beta subunit [Nitella axillaris] gi|44885382|dbj|BAD11934.1| ATP synthase beta subunit [Nitella axilliformis] gi|56342295|dbj|BAD74009.1| ATP synthase beta subunit [Nitella axilliformis] gi|56342297|dbj|BAD74010.1| ATP synthase beta subunit [Nitella axilliformis] gi|59857520|dbj|BAD89761.1| ATP synthase beta subunit [Nitella axilliformis] Length = 340 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 20 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTDLDTKLSIFETGIKVVDLLAPYR 76 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 77 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 136 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 137 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 196 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 197 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 254 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 255 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 313 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 314 LQDIIAILG 322 >gi|231586|sp|P29685|ATPBM_HEVBR RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor gi|18831|emb|CAA41401.1| mitochondrial ATP synthase beta-subunit [Hevea brasiliensis] Length = 562 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 25/304 (8%) Query: 109 LGKPIDGDDSLGKGDLS----MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 +G+PID +GD+ + I + P +++ ++ TGI+V+D+ P G +I Sbjct: 179 IGEPIDE-----RGDIKTSHFLPIHREAPAFVDQATEQQILVTGIKVVDLLAPYQRGGKI 233 Query: 165 GVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGRE----VREFIED---YLGDNL 214 G+F G+G+GK+ L+ + + + VGER RE RE IE LGD Sbjct: 234 GLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREMIESGVIKLGDKQ 293 Query: 215 --KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIAT 271 K +V +E P R LT +T+AE+F ++G +VLL +D+I RF + E++ Sbjct: 294 ADSKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFIDNIFRFTQANSEVSA 353 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP + + Sbjct: 354 LLGRIPSAVGYQPTLATDLGGLQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTFAH 411 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIR 390 LD VL+R ++E G YP VDPL S SR+ +E + ++ ++ +DI Sbjct: 412 LDATTVLSRQISELGIYPAVDPLDSTSRMLSPHILGEEHYNTARGVQKVLQNYKNLQDII 471 Query: 391 LIGG 394 I G Sbjct: 472 AILG 475 >gi|56236572|gb|AAV84653.1| ATP synthase beta subunit [Abies lasiocarpa] Length = 411 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 165/319 (51%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 34 GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 90 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 91 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 149 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 150 GVINEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 209 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 210 QAGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 267 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD V +R LA +G YP VDPL S S + + W E+ ++ + + Sbjct: 268 APATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQ 326 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 327 RYKELQDIIAI----PGLD 341 >gi|61968245|gb|AAX57049.1| ATP synthase beta subunit [Gonatogyne brasiliensis] Length = 479 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE RE E Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYREMKESG 208 Query: 210 L--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 + +NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 209 VINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|269798925|gb|ACZ43762.1| ATP synthase beta subunit [Corchoropsis psilocarpa] Length = 470 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 88 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFVQLDTKLSIFETGIKVVDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 203 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E LG++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 204 GVINEQNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 261 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 262 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 319 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 320 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 379 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 380 QRYKELQDIIAILG 393 >gi|124361818|gb|ABN09351.1| ATP synthase beta subunit [Styrax benzoin] Length = 465 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P + F+TGI+V+D+ Sbjct: 84 GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 201 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 318 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 378 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 379 KELQDIIAILG 389 >gi|4995191|emb|CAB44036.1| H(+)-transporting ATP synthase [Heliocarpus americanus] Length = 482 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|7524980|ref|NP_050078.1| ATPase subunit 1 [Dictyostelium discoideum] gi|74949694|sp|Q9XPJ9|ATPAM_DICDI RecName: Full=ATP synthase subunit alpha, mitochondrial gi|4958883|dbj|BAA78060.1| ATPase subunit 1 [Dictyostelium discoideum] Length = 519 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 116/423 (27%), Positives = 201/423 (47%), Gaps = 27/423 (6%) Query: 8 LAQLAEDYSKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNLGQVIRINL 67 L +++ Y K L ++ G + V+ LSQ + +G+ V GKN + +NL Sbjct: 36 LNKVSSKYGKVLFIKDGVVK--------VSGLSQ-IKIGEKVEFVGKNLYGMA----LNL 82 Query: 68 DIVYICPVGIGEEISL--GDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLG--KG 122 + + V GE+ ++ G +V + F I GRV++ LG+PIDG L K Sbjct: 83 EATSVGIVIFGEDTAIYEGVIVKRCEQNFAIKVDKTMLGRVVDVLGQPIDGLGELKDTKT 142 Query: 123 DLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFA 182 M + K P + R+ V + TG++++D P+ GQR + GKS + Sbjct: 143 TRVMSVERKAPGIVTRKSVHESMLTGVKIVDALLPIGRGQRELIIGDRQTGKSAIAVDAI 202 Query: 183 RSDCFDKVIISL---VGERGREVREFIEDY-LGDNLKKSVVVVATSDESPILRKMAPLTA 238 + +K I+ + VG++ VR +E L+ ++VVV+T+ ++ L+ +AP T Sbjct: 203 LNQQVNKDIVCIYVAVGQKKSTVRRLVEMLNTKGALEYTIVVVSTASDAAPLQFLAPYTG 262 Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298 TI EYF +G + L++ D +++ A + R+++ P YP VF RLLER Sbjct: 263 CTIGEYFRDEGKHALIVYDDLSKHAVAYRQMSLLLRRPPGREAYPGDVFYIHSRLLERAA 322 Query: 299 PSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 ++ G++TA V + + I ++ SI DG I L + L +G P V+ S Sbjct: 323 KLNEKYGCGSLTAFPIVETQAGDVSAYIPTNIISITDGQIFLEKELFNKGIRPAVNVGLS 382 Query: 357 VSRLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDF 416 VSR+ A SA KKL +L + ++ R++ + D + + + + + + Sbjct: 383 VSRVGSAAQSAVMKKLAGALKLELAQY---RELARFEQFSSNADAVTTQILKKGKLTIEL 439 Query: 417 LKQ 419 LKQ Sbjct: 440 LKQ 442 >gi|11466372|ref|NP_038375.1| ATP synthase CF1 beta subunit [Mesostigma viride] gi|12585166|sp|Q9MUT5|ATPB_MESVI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|7259515|gb|AAF43816.1|AF166114_28 CF1 beta subunit of ATP synthase [Mesostigma viride] Length = 481 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 26/311 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV----PPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+DG GD+ + S + P + F+TGI+V+D+ P Sbjct: 96 LGRIFNVLGEPVDG-----LGDVVAKTKSPIHRNSPTFIELDTKLSIFETGIKVVDLLAP 150 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 210 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +NL S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 211 INEENLSSSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQA 270 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSREMGTLQERI--TSTKQGSITSIQAVYVPADDLTDPAP 328 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + + W E+ ++ + + R+ Sbjct: 329 ATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYGTAQRVKQTLQRY 387 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 388 KELQDIIAILG 398 >gi|309322400|ref|YP_003934480.1| ATP synthase CF1 beta chain [Cathaya argyrophylla] gi|307683326|dbj|BAJ19633.1| ATP synthase CF1 beta chain [Cathaya argyrophylla] Length = 492 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 162/319 (50%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARITSPIHRPAPAFTELDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 GVINKQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 277 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 278 QAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDP 335 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 336 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQ 394 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 395 RYKELQDIIAI----PGLD 409 >gi|281209914|gb|EFA84082.1| ATP synthase beta chain [Polysphondylium pallidum PN500] Length = 704 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 103/347 (29%), Positives = 171/347 (49%), Gaps = 25/347 (7%) Query: 69 IVYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSME 127 +V + I + +S G +V + G ++ GR++N G+PIDG + K + Sbjct: 191 VVRCVALEITDGLSRGTVVQNTGAPLKVPVGRPTLGRIMNVTGEPIDGCGPI-KASERLP 249 Query: 128 IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF----AR 183 I + P + TGI+VID+ TP G +IG+F G+G+GK+ L+ A+ Sbjct: 250 IWREPPKFDELAPSAEILVTGIKVIDLLTPYAKGGKIGLFGGAGVGKTVLIQELINNVAK 309 Query: 184 SDCFDKVIISLVGERGREVREFIEDYL----------GDNLK----KSVVVVATSDESPI 229 S V VGER RE + + + G+ K +V +E P Sbjct: 310 SHGGFSVFTG-VGERTREGNDLYHEMVTAGVIKLQGSGETFSTEGSKVSLVFGQMNEPPG 368 Query: 230 LRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R LT +T+AEYF ++ +VLL +D+I RF + E++ G +P A GY ++ + Sbjct: 369 ARARVTLTGLTVAEYFRDAENQDVLLFIDNIFRFTQAGSEMSALLGRIPSAVGYQPTLAT 428 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 ++ + ERI + + G+IT+V +V V D+ DP + + LD VL+R+++E G Y Sbjct: 429 DMGSMQERI--TTTKNGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAVSELGIY 486 Query: 349 PPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 P VDPL S S + D +E K + + ++ ++ +DI I G Sbjct: 487 PAVDPLDSTSLMLDPNIIGEEHYKTATDVQKILQEYKGLQDIIAILG 533 >gi|172072905|ref|YP_001806666.1| ATP synthase CF1 beta subunit [Cryptomeria japonica] gi|171854924|dbj|BAG16664.1| ATP synthase CF1 beta subunit [Cryptomeria japonica] gi|239794293|dbj|BAH73290.1| ATP synthase CF1 beta subunit [Cryptomeria japonica] gi|239794375|dbj|BAH73371.1| ATP synthase CF1 beta subunit [Cryptomeria japonica] Length = 491 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 160/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D LG D L+ + + PA + F+TG Sbjct: 94 GPLSVPVGETTLGRIFNVLGEPVD---DLGPVDALTRSPIHRSAPAFTQLDTRFSIFETG 150 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 151 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 209 Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255 ++ + K +V +E P R LTA+T+AEYF +VLL Sbjct: 210 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 269 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 270 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 327 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + +E + Sbjct: 328 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQ 387 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 388 GVKQTLQRYKELQDIIAILG 407 >gi|119350495|gb|ABL63198.1| AtpB [Geminella minor] Length = 380 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 161/314 (51%), Gaps = 28/314 (8%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG + + I P ++ F+TGI+V+D+ P Sbjct: 26 ATLGRIFNVLGEPVD---NLGPVESKEGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAP 82 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 83 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 141 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E+ +G++ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 142 VINEENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRF 199 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ SE+ L ERI + + G+IT++ +V V D+ D Sbjct: 200 VQAGSEVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAVYVPADDLTD 257 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380 P + + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + Sbjct: 258 PAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYQCAQNVKQTL 316 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 317 QRYKELQDIIAILG 330 >gi|19033099|gb|AAL83534.1|AF408806_1 ATP synthase beta subunit [Mesostigma viride] Length = 402 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 157/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+DG D + K I P + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVDGLGDVVAK--TKFPIHRNSPTFIELDTKLSIFETGIKVVDLLAPYRR 97 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 98 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 157 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +NL S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 158 ENLSSSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGSE 217 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 218 VSALLGRMPSAVGYQPTLSREMGTLQERI--TSTKQGSITSIQAVYVPADDLTDPAPATT 275 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSS--LTHLIHRFEET 386 + LD VL+R+LA +G YP VDPL S S + + W E+ ++ + + R++E Sbjct: 276 FAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYGTAQRVKQTLQRYKEL 334 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 335 QDIIAILG 342 >gi|22711896|ref|NP_683810.1| ATP synthase CF1 beta subunit [Chaetosphaeridium globosum] gi|23813703|sp|Q8SLY2|ATPB_CHAGL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|22416900|gb|AAM96500.1| CF1 beta subunit of ATP synthase [Chaetosphaeridium globosum] Length = 493 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 32/314 (10%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D G ++ + S + PA + + F+TGI+V+D+ P Sbjct: 105 LGRIFNVLGEPVDN-----MGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 218 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E+ LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 219 VINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 276 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 277 VQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTD 334 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380 P + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 335 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTL 393 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 394 QRYKELQDIIAILG 407 >gi|332146793|dbj|BAK19948.1| ApH+ATPase beta subunit [Aphanothece halophytica] Length = 484 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D ++ D I +P + F+TGI+VID+ P Sbjct: 95 ATLGRIFNVLGEPVDQKGAVNSDD-QFPIHRPIPQLTELETKPSIFETGIKVIDLIAPYR 153 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G + G+F G+G+GK+ L++ A++ V + ER RE + + + N+ Sbjct: 154 RGGKTGLFGGAGVGKTVIIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYSEMVESNVI 212 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG-DNVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF G +VLL +D+I RF + Sbjct: 213 NAEDLTQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVGKQDVLLFVDNIFRFVQAG 272 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +++ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 MEVSALLGRMPSAVGYQPTLGTDMGDLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 330 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + R++E Sbjct: 331 TTFAHLDATTVLSRGLASKGIYPAVDPLDSSSTMLQPDIVGEEHYGTAREVQATLQRYKE 390 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 391 LQDIIAILG 399 >gi|331268171|ref|YP_004347820.1| ATP synthase CF1 beta subunit [Chlorella variabilis] gi|325296348|gb|ADZ05068.1| ATP synthase CF1 beta subunit [Chlorella variabilis] Length = 481 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + D + I P ++ F+TGI+V+D+ P G Sbjct: 98 GRIFNVLGEPVDNLGPVNNKD-QLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINESN 216 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 217 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 276 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 277 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 334 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R+LA +G YP VDPL S S + D+ + ++ + R++E +DI Sbjct: 335 HLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDI 394 Query: 390 RLIGG 394 I G Sbjct: 395 IAILG 399 >gi|320353386|ref|YP_004194725.1| alternate F1F0 ATPase, F1 subunit alpha [Desulfobulbus propionicus DSM 2032] gi|320121888|gb|ADW17434.1| alternate F1F0 ATPase, F1 subunit alpha [Desulfobulbus propionicus DSM 2032] Length = 503 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 116/394 (29%), Positives = 178/394 (45%), Gaps = 16/394 (4%) Query: 1 MQKNLETLAQLAEDYSKNL-VVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDNL 59 +Q A LAE+ L + GY+ ++ S V L + H G Sbjct: 6 IQDMSRVFATLAEETRTALQATEVGYVVAVGSGIARVEGLPSVKSQELLLFHGGVPG--- 62 Query: 60 GQVIRINLDIVYICPVGIGE--EISLGDLVFHWGRFRISPSA-CWCGRVINALGKPIDGD 116 I N+D I + +GE I+ G V+ GR P GRVI+A G P+DG+ Sbjct: 63 ---IAFNIDPYEIGVILLGECANIAAGTKVYCTGRVVDIPVGDALLGRVISATGAPLDGE 119 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + + + + P M+R V +TGI+VID P+ GQR + GK+ Sbjct: 120 SGIEAVE-RLPVEQESPSIMDRAPVVTPLETGIKVIDALVPIGKGQRELILGDRQTGKTA 178 Query: 177 LL--SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKM 233 + ++ + + +G+RG V + I + +VV+VA DESP L+ + Sbjct: 179 IALDTIINQQGKNVLCVYCAIGQRGSAVAQLIASLRRHGAMAYTVVLVAGGDESPGLQFI 238 Query: 234 APLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRL 293 AP A +IAEYF +G +VL++ D +TR A + RE++ P YP +F RL Sbjct: 239 APYAATSIAEYFMRQGRDVLVVYDDLTRHARAYRELSLLLRRPPGREAYPGDIFYIHSRL 298 Query: 294 LERIGPSEKE--KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPV 351 LER E G++TA+ + N D I ++ SI DG I L+ ++G P V Sbjct: 299 LERSTHLRPELGGGSLTAIPILETQAQNLADYIPTNLISITDGQIYLSPDFFQKGVLPAV 358 Query: 352 DPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 D SVSR+ K + + L +FEE Sbjct: 359 DVGKSVSRVGGKTQLPAYRAITGDLRLAYAQFEE 392 >gi|257852954|gb|ACV71488.1| ATP synthase beta subunit [Cyrillopsis paraensis] Length = 490 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+PID LG D + + + PA + + F+TGI+V+D+ P Sbjct: 97 ATLGRIFNVLGEPID---DLGPVDTRTTSPIHRAAPAFIQLDTKFSIFETGIKVVDLLAP 153 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 DN+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 214 INEDNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 391 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 392 ELQDIIAILG 401 >gi|110915610|gb|ABH02593.1| ATP synthase beta subunit [Catabrosa aquatica] Length = 458 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 195 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|119350509|gb|ABL63205.1| AtpB [Micractinium pusillum] Length = 392 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + D + I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNLGPVNNKD-QLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINESN 157 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 158 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 217 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 218 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R+LA +G YP VDPL S S + D+ + ++ + R++E +DI Sbjct: 276 HLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDI 335 Query: 390 RLIGG 394 I G Sbjct: 336 IAILG 340 >gi|18077563|emb|CAC88851.1| atpD beta synthase chain [Pseudomonas marginalis] Length = 258 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 125/222 (56%), Gaps = 6/222 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 23 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 83 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + ++G+IT++++V V D+ Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSILAVYVPADDL 200 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242 >gi|256831126|ref|YP_003159854.1| ATP synthase F1 subunit beta [Desulfomicrobium baculatum DSM 4028] gi|256580302|gb|ACU91438.1| ATP synthase F1, beta subunit [Desulfomicrobium baculatum DSM 4028] Length = 469 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/302 (33%), Positives = 162/302 (53%), Gaps = 17/302 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVE-KGFKTGIRVIDIFTPL 158 GR++N +G+P+D KG +S E M + P Q + + +TG++VID+ P Sbjct: 94 GRILNVVGRPVDE-----KGPISSEKMYPIHRPAPGFTEQSTKIEVLETGVKVIDLLVPF 148 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYL-GDNL 214 G ++G+F G+G+GK+ +L + + IS+ VGER RE + + + L Sbjct: 149 PKGGKMGMFGGAGVGKTVILMEMINNIAKNHGGISVFAGVGERTREGNDLYHEMIEAGVL 208 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K+ +V +E P R LTA+ AEYF + +VLL +D+I RF + E++ Sbjct: 209 DKACLVYGQMNEPPGARSRVALTALAAAEYFRDEENQDVLLFVDNIFRFTQAGSEVSALL 268 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G +P A GY ++ ++L L ERI + + G+IT+V +V V D+ DP + S LD Sbjct: 269 GRMPSAVGYQPTLGTDLGELQERI--TSTKTGSITSVQAVYVPADDLTDPAPATTFSHLD 326 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHRFEETRDIRLI 392 G IVL+R +AE G YP VDPL S SR+ D D ++ L+ ++++ +DI I Sbjct: 327 GTIVLSRQIAELGIYPAVDPLDSTSRILDPNVIGMDHYMTARAVQRLLQKYKDLQDIIAI 386 Query: 393 GG 394 G Sbjct: 387 LG 388 >gi|269123042|ref|YP_003305619.1| H(+)-transporting two-sector ATPase [Streptobacillus moniliformis DSM 12112] gi|268314368|gb|ACZ00742.1| H(+)-transporting two-sector ATPase [Streptobacillus moniliformis DSM 12112] Length = 459 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/328 (30%), Positives = 166/328 (50%), Gaps = 21/328 (6%) Query: 59 LGQVIRINLDI----VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGRVINALGKPI 113 LG+V+ +N D ++ P GI S V GR ++ S GRV + LG+ Sbjct: 41 LGKVLEVNEDKAVLQLFESPAGINMRDSK---VRFLGRPLKLRVSEDMIGRVFDGLGREK 97 Query: 114 D-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 D G + + L + ++ P A R + +TG+ ID L GQ++ +F+GSG+ Sbjct: 98 DNGPKIVAEKSLDINGLALNPVA--RDYPSEFIQTGVSAIDGLNTLVRGQKLPIFSGSGL 155 Query: 173 GKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATS 224 + L + AR + F V+ + VG E FIED+ + ++V+ + + Sbjct: 156 PHAELAAQIARQARVLGDGEKF-AVVFAAVGITYEEAEFFIEDFKKTGAIDRAVLFINLA 214 Query: 225 DESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYP 283 ++ + R P A+T +EY + KG NVL I+ +T + ++REI+ E+P RGYP Sbjct: 215 NDPSVERIATPRMALTCSEYLAFEKGMNVLTIITDLTNYCEALREISAARKEVPGRRGYP 274 Query: 284 TSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLA 343 ++++L L ER G + + G+IT + + + D+ PI D I +G IVL+R L Sbjct: 275 GYLYTDLSTLYERAGKLKGKPGSITQIPILTMPEDDKTHPIPDLTGYITEGQIVLSRELY 334 Query: 344 EEGRYPPVDPLASVSRLADKAWSADEKK 371 ++ PP+D L S+SRL DK ++ + Sbjct: 335 KKNIMPPIDVLPSLSRLKDKGIGKNKTR 362 >gi|46360663|gb|AAS89113.1| ATP synthase beta subunit [Fossombronia angulosa] Length = 382 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 159/310 (51%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + I P F+TGI+V+D+ P Sbjct: 2 SGRIFNVLGEPVD---NLGPVSSDTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 117 Query: 212 D--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 D N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 118 DEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 177 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 178 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 235 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 236 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKRTLQRYK 294 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 295 ELQDIIAILG 304 >gi|21684879|emb|CAD11566.1| ATP synthase beta subunit [Chorizandra cymbaria] Length = 401 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S+ I P + F+TGI+V+D+ P Sbjct: 13 ATLGRIFNVLGEPVD---NLGPVDTSITFPIHRSAPAFVQLDTXLSIFETGIKVMDLLAP 69 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD- 212 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 70 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 128 Query: 213 -----NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 129 VINEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 188 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG IT++ +V V D+ DP Sbjct: 189 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPA 246 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R+LA +G YP V PL S S + +E + + + R+ Sbjct: 247 PATTFAHLDATTVLSRALAAKGIYPAVSPLDSTSTMLQPNIVGEEHYETAQKVKQTLQRY 306 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 307 KELQDIIAILG 317 >gi|28188335|gb|AAL92547.1| ATP synthase beta subunit [Coleochaete scutata] Length = 395 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---ELGPVDATITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W + + + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|325478811|gb|EGC81921.1| ATP synthase ab C terminal domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 455 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 97/318 (30%), Positives = 159/318 (50%), Gaps = 17/318 (5%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 G+VI IN D +V + G + + F + S GR N LG+PID Sbjct: 42 GRVIEINKDRAMVQLFEGSTGINLKSTSVRFLGRPLELGVSEDMIGRAFNGLGEPIDDGP 101 Query: 118 SL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGK 174 S+ K D++ ++ V +R + +TGI ID L GQ++ +F+G+G+ Sbjct: 102 SIIPEEKRDVNGTAINPV----SRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGNGLPH 157 Query: 175 STLLSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDES 227 + + + AR D V+ + +G E + F++D+ L +SV+ + +D+ Sbjct: 158 NQVAAQIARQARVLSDDEGFAVVFAAIGITFEEAQFFMDDFRKTGALDRSVLFMNLADDP 217 Query: 228 PILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 I R P A+T AEY + + D VL+I+ +T +A ++RE++ E+P RGYP + Sbjct: 218 AIERLSTPKMALTAAEYLAFEKDMQVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYL 277 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L L ER G + G IT + + + D+ PI D I +G I+L+R L +G Sbjct: 278 YTDLSTLYERAGKLRGKPGTITQIPILSMPEDDITHPIPDLTGYITEGQIILDRGLYNQG 337 Query: 347 RYPPVDPLASVSRLADKA 364 PPV L S+SRL DK Sbjct: 338 VEPPVSILPSLSRLKDKG 355 >gi|4995221|emb|CAB44060.1| H(+)-transporting ATP synthase [Hibiscus punaluuensis] Length = 485 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 160/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 92 GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 209 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + S+ + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQSVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|15425574|emb|CAC60330.1| ATP synthase beta subunit [Echinops bannaticus] Length = 494 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 100 GATLGRIFNVLGEPID---NLGPVDASTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 217 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYDIAQEVKQTLQRY 394 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 395 KELQDIIAILG 405 >gi|11466709|ref|NP_039305.1| ATP synthase CF1 beta subunit [Marchantia polymorpha] gi|114552|sp|P06284|ATPB_MARPO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|11679|emb|CAA28091.1| atpB [Marchantia polymorpha] Length = 492 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG +++ + + PA + + F+TGI+V+D+ P Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVEVTTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 159 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNILKAHGGVSVFGGVGERTREGNDLYMEMKESKV 219 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 220 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|323715458|gb|ADY04797.1| ATP synthase beta subunit [Broussaisia arguta] Length = 481 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 93 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 151 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 211 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 212 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 271 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 329 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R++E Sbjct: 330 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKE 389 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 390 LQDIIAILG 398 >gi|113910960|gb|ABI48212.1| ATPase beta subunit [Abies homolepis] Length = 472 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/319 (31%), Positives = 165/319 (51%), Gaps = 28/319 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ Sbjct: 82 GATLGRIFNVLGEPVD---NLGPVDASTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 138 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 197 Query: 209 YLGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + + K K +V +E P R LTA+T+AE+F + +VLL +D+I RF Sbjct: 198 GVINEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEHFRDVNEQDVLLFIDNIFRFV 257 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 315 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIH 381 + + LD V +R LA +G YP VDPL S S + + W E+ ++ + + Sbjct: 316 APATTFAHLDATTVPSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQGVKQTLQ 374 Query: 382 RFEETRDIRLIGGYRPGVD 400 R++E +DI I PG+D Sbjct: 375 RYKELQDIIAI----PGLD 389 >gi|4995097|emb|CAB44016.1| H(+)-transporting ATP synthase [Durio zibethinus] Length = 483 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 92 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 209 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + + + + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGKEHYETAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|306773448|emb|CBJ55300.1| putative beta subunit of chloroplast ATP synthase [Sphaeropteris polypoda] Length = 383 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 163/314 (51%), Gaps = 26/314 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 8 GRISNVLGEPVD---NLGPIESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + E Sbjct: 125 QNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301 Query: 387 RDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 302 QDIIAI----PGLD 311 >gi|269798933|gb|ACZ43766.1| ATP synthase beta subunit [Corchoropsis crenata] Length = 470 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFVQLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 200 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E LG++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 201 GVINEQNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 258 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 259 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 316 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 317 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 376 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 377 QRYKELQDIIAILG 390 >gi|269798929|gb|ACZ43764.1| ATP synthase beta subunit [Corchoropsis crenata] Length = 470 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/314 (31%), Positives = 161/314 (51%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFVQLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 201 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E LG++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 202 GVINEQNLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 259 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 260 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLT 317 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 318 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 377 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 378 QRYKELQDIIAILG 391 >gi|150035721|gb|ABR67206.1| ATP synthase beta subunit [Danthonia californica] Length = 412 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 19 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLAIFETGIKVVDLLA 75 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 76 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 135 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 136 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 195 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 196 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 253 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + R+ Sbjct: 254 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYDTAQRVKETLQRY 313 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 314 KELQDIIAILG 324 >gi|110915588|gb|ABH02582.1| ATP synthase beta subunit [Avenella flexuosa] Length = 470 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 77 ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 133 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 134 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 193 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 194 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 253 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 254 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 311 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 312 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 371 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 372 ELQDIIAILG 381 >gi|293977763|ref|YP_003543193.1| F1 ATP synthase subunit beta [Candidatus Sulcia muelleri DMIN] gi|292667694|gb|ADE35329.1| ATP synthase, F1 beta subunit [Candidatus Sulcia muelleri DMIN] Length = 496 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 116/371 (31%), Positives = 183/371 (49%), Gaps = 46/371 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N +G IDG LG + S I + + PP TGI+VID+ P Sbjct: 93 GRVFNVVGNTIDG---LGNLNNSKRISIHRNPPKFEDLSTNIDILYTGIKVIDLVEPYIK 149 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VRE--------- 204 G +IG+F G+G+GK+ L+ + +S+ VGER RE +RE Sbjct: 150 GGKIGLFGGAGVGKTVLIQELINNIAKGYGGLSVFAGVGERTREGNDLLREMISSGIIKY 209 Query: 205 ---FIEDYLG----------DNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248 F+ED + LK K+ V +E P R L+ +T+AEY+ K Sbjct: 210 GDSFLEDMKNGKWDISKVDKNELKNSKATFVFGQMNEPPGARARVVLSGLTLAEYYRDRK 269 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 G +VL +D+I RF + E++ G +P A GY ++ SE+ + ERI + + G+IT Sbjct: 270 GRDVLFFIDNIFRFTQAGSELSALLGRMPSAVGYQPTLASEMGTMQERI--TSTKNGSIT 327 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD 368 ++ +V + D+ +DP + S LD VL+R ++ G YP VDPL+S SR+ + + Sbjct: 328 SIQAVYIPADDLSDPAPATTFSHLDATTVLSRKISSLGIYPAVDPLSSTSRILSIEFIGN 387 Query: 369 EKKLVSS-LTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQSPSDLSS 426 + L + + ++ R++E +DI I G + DK VH+ + FL Q P +++ Sbjct: 388 DHYLCAQRVKQILQRYQELQDIIAILGIEELSE--EDKIIVHRARRVQRFLSQ-PFNVAE 444 Query: 427 EDVFQEITKKL 437 + F IT KL Sbjct: 445 Q--FTGITGKL 453 >gi|291537270|emb|CBL10382.1| Archaeal/vacuolar-type H+-ATPase subunit B [Roseburia intestinalis M50/1] Length = 458 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 26/362 (7%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-----SACWCG 103 +V +GK LG+++ IN D + EE+SL L H R P S G Sbjct: 32 LVVEGKQK-KLGRIVEINNDYAVVQVFESTEEMSL--LNTH-ARLTGRPLCVGLSEEILG 87 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R N LG+PIDG ++ ++ ++ + +R+ +TGI ID T L GQ+ Sbjct: 88 RTFNGLGQPIDGLGAV-HAEVVRDVNGQPMNPCSREYPRNYIRTGISAIDGLTTLIRGQK 146 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGDNL 214 + +F+G+G+ L + V+ + +G + F + + Sbjct: 147 LPIFSGNGLPHDELAAQIVEQASLGDGENEDEPFAVVFAAMGVKYDVAEYFKRRFAECGV 206 Query: 215 KKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATN 272 V + P+ ++ P A+T AEY + K ++L+IL +T FA ++RE++ Sbjct: 207 SDHVAMFLNLSNDPVAERLITPKVALTAAEYLAFEKNMHILVILTDMTSFAEAMREVSAQ 266 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE+P +GYP ++SE L ER G G++T + + + D+ PI D I Sbjct: 267 KGEIPSRKGYPGYLYSEFAALYERAGIVNGASGSVTQIPILTMPNDDITHPIPDLTGYIT 326 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETR 387 +G IVL RSL ++ YPP++ L S+SRL +K D + L + L R E R Sbjct: 327 EGQIVLERSLHQKNIYPPINVLPSLSRLMKDGIGEKYTREDHQDLANQLFSSYARVGEAR 386 Query: 388 DI 389 D+ Sbjct: 387 DL 388 >gi|21633365|gb|AAM52157.1| ATP synthase beta subunit [Evolvulus glomeratus] gi|21633367|gb|AAM52158.1| ATP synthase beta subunit [Evolvulus nuttallianus] Length = 490 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LGKP+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGKPVD---NLGPVDTKTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|7708544|emb|CAB89969.1| ATP synthase beta subunit [Plagiopteron suaveolens] Length = 487 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLETKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 215 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGALQERI--TSTKKGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 393 KELQDIIAILG 403 >gi|21684909|emb|CAD11581.1| ATP synthase beta subunit [Pharus parvifolius] Length = 481 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 215 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 333 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRVVGNEHYETAQRVKQTLQRY 392 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 393 KELQDIIAILG 403 >gi|270313033|gb|ACZ73598.1| ATP synthase beta subunit [Cneorum tricoccon] Length = 476 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 206 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|291546409|emb|CBL19517.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus sp. SR1/5] Length = 460 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 98/325 (30%), Positives = 159/325 (48%), Gaps = 20/325 (6%) Query: 51 HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVI 106 H + +G+++ I D I + +SLG+ L H +SP GR Sbjct: 33 HMEDGTQKIGRIVEIYEDKAVIQVFEGTDNMSLGNTHTRLTGHPMEIGLSPE--ILGRTF 90 Query: 107 NALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRI 164 N +G+PIDG LG+ ++S+ I + R+ TGI ID T L GQ++ Sbjct: 91 NGIGQPIDG---LGEITPEVSLNINGLPLNPVTREYPRNYINTGISAIDGLTTLIRGQKL 147 Query: 165 GVFAGSGIGKSTLL-------SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS 217 +F+G+G+ L S+ A SD ++ + +G + F + Sbjct: 148 PIFSGNGLPHDKLAAQIVQQASLGADSDEKFAIVFAAMGVKYDVAEFFRRTFEESGASDH 207 Query: 218 VVVVATSDESPIL-RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGE 275 VV+ P++ R + P A+T AEY + KG ++L+IL IT F ++RE++++ GE Sbjct: 208 VVMFLNLANDPVVERLLTPKIALTAAEYLAFEKGMHILVILTDITSFCEAMREVSSSKGE 267 Query: 276 LPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGH 335 +P +GYP ++SEL L ER G G++T + + + D+ PI D I +G Sbjct: 268 IPSRKGYPGYLYSELATLYERAGIVRGGTGSVTQIPILTMPNDDITHPIPDLTGYITEGQ 327 Query: 336 IVLNRSLAEEGRYPPVDPLASVSRL 360 IVL+R L + YPP++ L S+SRL Sbjct: 328 IVLDRQLHGQAIYPPINVLPSLSRL 352 >gi|6687662|emb|CAB65035.1| ATP synthase beta subunit [Helianthus annuus] Length = 498 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDNSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFVDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 339 PVTTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQQVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|5758908|gb|AAD50882.1| ATP synthase beta subunit [Riedelia aff. wrayii SBG 83-203] Length = 496 Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 173/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G V G I GR Sbjct: 50 KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSIPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D S I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEKN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + NVLL +D+I RF + E++ Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|329116554|ref|ZP_08245271.1| ATP synthase ab C terminal domain protein [Streptococcus parauberis NCFD 2020] gi|326906959|gb|EGE53873.1| ATP synthase ab C terminal domain protein [Streptococcus parauberis NCFD 2020] Length = 459 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/336 (29%), Positives = 168/336 (50%), Gaps = 17/336 (5%) Query: 41 QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98 Y L + +H G+ GQV+ ++ D +V + G ++ + F ++ S Sbjct: 27 HYNELVEISMHDGQKRQ--GQVLEVHEDKAMVQLFEGSSGINLAKTKVRFTGHPLEVAVS 84 Query: 99 ACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ + +GKPIDG D L + L ++ + P A R ++ +TGI ID Sbjct: 85 EDMIGRIFDGMGKPIDGGPDLLPEKYLDIDGQAINPVA--RDYPDEFIQTGISAIDHLNT 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ VF+GSG+ + L + AR D F V+ + +G E F+ D Sbjct: 143 LVRGQKLPVFSGSGLPHNELAAQIARQATVLNADDNF-AVVFAAMGITFEEAEFFMNDLR 201 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268 + +SV+ + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE Sbjct: 202 ETGAIDRSVLFMNLANDPAIERIATPRIALTTAEYLAYEKDMHVLVIMTDMTNYCEALRE 261 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I+ E+P RGYP +++ L L ER G +KG++T + + + D+ PI D Sbjct: 262 ISAARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLT 321 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L+ L G PP++ L S+SRL DK Sbjct: 322 GYITEGQIILSHELYNSGFRPPINILPSLSRLKDKG 357 >gi|189462119|ref|ZP_03010904.1| hypothetical protein BACCOP_02799 [Bacteroides coprocola DSM 17136] gi|189431200|gb|EDV00185.1| hypothetical protein BACCOP_02799 [Bacteroides coprocola DSM 17136] Length = 508 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/327 (30%), Positives = 162/327 (49%), Gaps = 45/327 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GRV+N +G+ IDG L K I + P + ++ TGI+VID+ P G Sbjct: 95 GRVMNVVGETIDGMKELDKTG-GFPIHREPPKFEDLATTQEVLFTGIKVIDLLEPYLKGG 153 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 154 KIGLFGGAGVGKTVLIKELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 211 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSK- 248 GD KS+ +V +E P R+ L+ +T+AE F + Sbjct: 212 GDEFLKSMEEGNWDLSKVDYSEVEKSQVAMVFGQMNEPPGARQSVALSGLTLAESFRDRQ 271 Query: 249 -GDN----VLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 G+N +L +D+I RF + E++ G +P A GY ++ +E+ ++ ERI + + Sbjct: 272 TGENGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TSTK 329 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 330 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 389 Query: 364 AW-SADEKKLVSSLTHLIHRFEETRDI 389 D + + ++ R +E +DI Sbjct: 390 LIVGKDHYETAQRVKQILQRNKELQDI 416 >gi|110915590|gb|ABH02583.1| ATP synthase beta subunit [Helictotrichon hookeri] Length = 477 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 199 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 200 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 317 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 318 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 377 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 378 KELQDIIAILG 388 >gi|24298790|dbj|BAC22105.1| F-ATPase beta-subunit [Thermotoga neapolitana] Length = 468 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 107/327 (32%), Positives = 173/327 (52%), Gaps = 16/327 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K I P + + + +TGI+VID+ P G Sbjct: 90 LGRILNVIGEPVDEAGEI-KSKERWPIHRPAPELIEQSTEIEILETGIKVIDLLAPFPKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG F G+G+GK+ L+ R+ + S+ VGER RE E ++E L + Sbjct: 149 GKIGFFGGAGVGKTVLVMELIRNIAIEHKGFSVFAGVGERTREGNELWLEMQESGVLGNT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 ++V +E P R LTA+TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 ILVFGQMNEPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + +G+IT+V ++ V D+ DP + + LD + Sbjct: 269 PSAVGYQPTLATDMGELQERI--TSTRRGSITSVQAIYVPADDITDPAPATTFAHLDATV 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R +AE G YP VDPL S S++ D A E ++ + ++ R+++ +DI I G Sbjct: 327 VLSRRIAELGLYPAVDPLDSSSKILDPAVVGREHYEVARGVQEVLQRYKDLQDIIAILGV 386 Query: 396 R---PGVDLILDKAVHQVPIIYDFLKQ 419 + P L+ VH+ I FL Q Sbjct: 387 KELSPEDKLV----VHRARRIQRFLSQ 409 >gi|119350441|gb|ABL63171.1| AtpB [Actinastrum hantzschii] Length = 392 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + + I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNLGPVNNNE-QLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINESN 157 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 158 LSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEVS 217 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 218 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R+LA +G YP VDPL S S + D+ + ++ + R++E +DI Sbjct: 276 HLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDI 335 Query: 390 RLIGG 394 I G Sbjct: 336 IAILG 340 >gi|118918091|dbj|BAF40435.1| ATP synthase beta subunit [Euphronia guianensis] Length = 488 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 154/307 (50%), Gaps = 22/307 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED 208 P G +IG+F G+G+GK+ L+ + A++ V + ER RE +E E Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 210 Query: 209 YL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + NL +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 211 RVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 270 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G LP A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 QAGSEVSALLGRLPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 328 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S L K + ++ R Sbjct: 329 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPDIVGKKHYKTAQRVKQILQR 388 Query: 383 FEETRDI 389 ++E +D+ Sbjct: 389 YKELQDV 395 >gi|113910838|gb|ABI48151.1| ATPase beta subunit [Andreaea rothii] Length = 456 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 162/312 (51%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D+S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPVDVSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V ER RE E E Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGXG-ERTREGNDLYMEMKESK 182 Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + D N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 183 VIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 242 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ ERI + ++G+IT++ +V V D+ DP Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLGTEMGTSQERI--TSTKEGSITSIQAVYVPADDLTDPA 300 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 301 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 359 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 360 YKELQDIIAILG 371 >gi|20384957|gb|AAM19145.1| ATP synthase beta subunit [Nitella praelonga] Length = 402 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + S+ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVNTSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 DN+ +S V V +E P R LTA+T+AEY +VLL +D+I RF + Sbjct: 157 EDNISESKVALVYGQMNEPPGARMRVGLTALTMAEYLRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 275 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|14718015|gb|AAK72749.1| ATP synthase beta subunit [Coccoloba uvifera] Length = 469 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 86 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 142 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 202 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 203 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 262 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 263 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPAP 320 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R+LA +G YP VDPL S S + +E K + + R++ Sbjct: 321 ATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKTAQRVKQTLQRYK 380 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 381 ELQDIIAILG 390 >gi|295065735|ref|YP_003587675.1| ATP synthase CF1 beta subunit [Anomochloa marantoidea] gi|251765259|gb|ACT15413.1| ATP synthase CF1 beta subunit [Anomochloa marantoidea] Length = 498 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N ++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNFEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|184127855|gb|ACC67827.1| ATP synthase beta chain [Marattia salicina] Length = 399 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D+ + + K PA + + F+TGI+V+D+ P Sbjct: 12 LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 69 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 128 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 129 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 188 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 189 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 246 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 247 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 305 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 306 LQDIIAILG 314 >gi|110915690|gb|ABH02633.1| ATP synthase beta subunit [Puccinellia distans] Length = 471 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 77 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 254 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASXKKGSITSIQAVYVPADDLTDPA 311 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 312 PATTFAHLDAXTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 371 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 372 KELQDIIAILG 382 >gi|56236590|gb|AAV84662.1| ATP synthase beta subunit [Juniperus communis] Length = 421 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 96/311 (30%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D L+ + + PA + + F+TGI+V+D+ P Sbjct: 35 TTLGRIFNVLGEPVD---NLGPVDALTRSPIHRSAPAFTQLDTKFSIFETGIKVVDLLAP 91 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 92 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 150 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 151 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 210 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 268 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + ++ + + + R+ Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEQHYETAQGVKQTLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|231597|sp|P30158|ATPB_DICDH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|11474|emb|CAA47370.1| atpB [Dictyota dichotoma] Length = 481 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 154/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+ +D + +G G+ + I P + + F+TGI+V+D+ P Sbjct: 94 ATLGRIFNVLGQTVD-NIEIGTGEDRLPIHRPAPSFTDLETKPAIFETGIKVVDLLAPYR 152 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 212 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 213 ESNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINRQDVLLFIDNIFRFVQAGS 272 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP + Sbjct: 273 EVSALLGRMPSAVGYQPTLGTEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPAT 330 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + E + L + R++E Sbjct: 331 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPVIVGSEHYDTAQLVKKTLQRYKEL 390 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 391 QDIIAILG 398 >gi|305671629|gb|ADM63124.1| ATP synthase beta subunit [Morina longifolia] Length = 437 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 54 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 110 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 111 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 169 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 170 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 229 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 230 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 287 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + + + + R Sbjct: 288 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGNNHYETAQRVKQTLQR 347 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 348 YKELQDIIAILG 359 >gi|224178028|ref|YP_002600926.1| CF1 beta subunit of ATP synthase [Pyramimonas parkeae] gi|215882695|gb|ACJ71068.1| CF1 beta subunit of ATP synthase [Pyramimonas parkeae] Length = 488 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 156/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + ++++ I + P ++ F+TGI+V+D+ P G Sbjct: 103 LGRIFNVLGEPVDEMGPVAN-EMTLPIHREAPAFVDLDTKLAIFETGIKVVDLLAPYRRG 161 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVV 221 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +K+S V+ Sbjct: 162 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKESGVIN 219 Query: 222 ATS-------------DESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 A +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 220 ANKLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNNQDVLLFIDNIFRFVQAGS 279 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 280 EVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKNGSITSIQAVYVPADDLTDPAPAT 337 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + DE + + R++E Sbjct: 338 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWILGDEHYDTAQGVKKTLQRYKEL 397 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 398 QDIIAILG 405 >gi|149798637|gb|ABR32009.1| ATP synthase beta chain [Acrostichum danaeifolium] Length = 426 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG S + + + PA + + F+TGI+V+D+ P Sbjct: 39 LGRIFNVLGEPVD---NLGPVQNSTKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 96 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 155 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 215 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+RSLA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 274 TFAHLDATTVLSRSLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 333 LQDIIAILG 341 >gi|14717960|gb|AAK72722.1| ATP synthase beta subunit [Bauhinia sp. Doyle s.n.] Length = 470 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E K + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKTAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|6688901|emb|CAB65316.1| ATP synthase beta subunit [Olea europaea] gi|6688960|emb|CAB65348.1| ATP synthase beta subunit [Phyla lanceolata] Length = 497 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|305671693|gb|ADM63156.1| ATP synthase beta subunit [Symphoricarpos sp. Donoghue & Winkworth 28] Length = 489 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 107/366 (29%), Positives = 171/366 (46%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D GQ I + ++ V + E ++ G V G + GR Sbjct: 42 KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 101 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 158 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 217 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF NVLL +D+I RF + E+ Sbjct: 218 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 277 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 335 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + + + + + R++E +D Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGQNHYETAQRVKQTLQRYKELQD 395 Query: 389 IRLIGG 394 I I G Sbjct: 396 IIAILG 401 >gi|270313041|gb|ACZ73602.1| ATP synthase beta subunit [Cneorum tricoccon] Length = 465 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|159227604|emb|CAJ80593.1| ATP synthase beta subunit [Nicandra physalodes] Length = 343 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 156/305 (51%), Gaps = 20/305 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + + F+TGI+V+D+ P Sbjct: 42 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLAP 98 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 99 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 158 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 159 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 218 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 219 GSEVSALLGRMPSAVGYQPTLSTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 276 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 277 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYK 336 Query: 385 ETRDI 389 E +DI Sbjct: 337 ELQDI 341 >gi|113910836|gb|ABI48150.1| ATPase beta subunit [Sphagnum capillifolium] Length = 472 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDAGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|164566061|gb|ABY61173.1| ATP synthase beta subunit [Danaea bipinnata] gi|164566131|gb|ABY61208.1| ATP synthase beta subunit [Danaea polymorpha] Length = 394 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D G D+ ++ + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAILG 309 >gi|163790831|ref|ZP_02185256.1| V-type ATP synthase subunit B [Carnobacterium sp. AT7] gi|159873899|gb|EDP67978.1| V-type ATP synthase subunit B [Carnobacterium sp. AT7] Length = 458 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/315 (31%), Positives = 157/315 (49%), Gaps = 11/315 (3%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDL-VFHWGR-FRISPSACWCGRVINALGKPIDGDD 117 GQV+ I+ D + I+L D V GR + S GRV + +G+ D Sbjct: 42 GQVLEIDGDKAMVQIFEGSSGINLKDTKVRFLGRPLSLDVSEDMVGRVFDGMGRVNDNGP 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 L + +++I + M R ++ +TGI ID L GQ++ VF+GSG+ L Sbjct: 102 ELIP-EKTLDINGEAINPMARDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHKEL 160 Query: 178 LSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 + AR SD V+ + +G E F+ED+ + +SV+ + +D+ I Sbjct: 161 AAQIARQATVKNSDEKFAVVFAAIGITFEEAEFFMEDFRKTGAIDRSVMFINLADDPAIE 220 Query: 231 RKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSE 289 R P A+T AEY + + D +VL+I+ +T + ++REI+ E+P RGYP +++ Sbjct: 221 RIATPKMALTAAEYLAYEKDMHVLVIMTDMTNYCEALREISAARREVPGRRGYPGYLYTN 280 Query: 290 LPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 L L ER G KG++T + + + D+ PI D I +G ++L+R L G P Sbjct: 281 LATLYERAGRLVGGKGSVTQIPILTMPEDDKTHPIPDLTGYITEGQLILSRELYNSGVQP 340 Query: 350 PVDPLASVSRLADKA 364 P+D L S+SRL DK Sbjct: 341 PIDVLPSLSRLKDKG 355 >gi|21633301|gb|AAM52125.1| ATP synthase beta subunit [Merremia aegyptia] Length = 490 Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|283798589|ref|ZP_06347742.1| V-type sodium ATPase, B subunit [Clostridium sp. M62/1] gi|291073673|gb|EFE11037.1| V-type sodium ATPase, B subunit [Clostridium sp. M62/1] gi|295090622|emb|CBK76729.1| Archaeal/vacuolar-type H+-ATPase subunit B [Clostridium cf. saccharolyticum K10] gi|295115704|emb|CBL36551.1| Archaeal/vacuolar-type H+-ATPase subunit B [butyrate-producing bacterium SM4/1] Length = 457 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/329 (29%), Positives = 161/329 (48%), Gaps = 28/329 (8%) Query: 98 SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 S GRV + LG+PIDG D+ L M ++ P ++ +TG+ Sbjct: 82 SEDMLGRVFDGLGRPIDGGPEILPDERRDINGLPMNPAARSYP-------QEFIQTGVSA 134 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREF 205 ID L GQ++ +F+ SG+ + L + AR +D V+ + +G E F Sbjct: 135 IDGLNTLVRGQKLPIFSASGLPHANLAAQIARQAKVRGTDEQFAVVFAAMGITFEESHFF 194 Query: 206 IEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFA 263 E + + ++V+ + +++ + R P A+T AEY + K +VL+IL IT +A Sbjct: 195 TESFKETGAIDRTVLFINLANDPAVERIATPKMALTAAEYLAFEKNMHVLVILTDITNYA 254 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 ++REI+ E+P RGYP ++++L + ER G + G+IT + + + D+ P Sbjct: 255 DALREISAARKEVPGRRGYPGYMYTDLASIYERAGRQNGKTGSITMIPILTMPEDDKTHP 314 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTH 378 I D I +G I+L+R L +G PP+D L S+SRL DK AD ++ L Sbjct: 315 IPDLTGYITEGQIILSRELYRKGVMPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLFA 374 Query: 379 LIHRFEETRDIRLIGGYRP--GVDLILDK 405 R +E +++ +I G VDLI K Sbjct: 375 AYARGKEAKELMVILGEAALSDVDLIYAK 403 >gi|110915576|gb|ABH02576.1| ATP synthase beta subunit [Alopecurus textilis] Length = 472 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 195 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|6017814|gb|AAF01641.1| ATP synthase beta subunit [Nelumbo lutea] gi|33327755|gb|AAQ09241.1| ATP synthase beta subunit [Nelumbo lutea] gi|194267387|gb|ACF35679.1| ATP synthase beta subunit [Nelumbo lutea] Length = 491 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D L+ + K PA + + F+TGI+V+D+ Sbjct: 97 GATLGRIFNVLGEPVD---NLGPVDTLTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 392 KELQDIIAILG 402 >gi|300709755|ref|YP_003735569.1| V-type ATP synthase subunit B [Halalkalicoccus jeotgali B3] gi|299123438|gb|ADJ13777.1| V-type ATP synthase subunit B [Halalkalicoccus jeotgali B3] Length = 496 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 94/299 (31%), Positives = 148/299 (49%), Gaps = 42/299 (14%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMN---RQRVEKGFKTGIRVIDIFTPL 158 GRV++ G PIDG G + E V A+N R+ E+ +TG+ ID L Sbjct: 84 LGRVLDGSGNPIDG----GPEIVPEERQDIVGAAINPYAREYPEEFIQTGVSSIDGMNTL 139 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARS----------DCFDK------------------- 189 GQ++ +F+ SG+ + L AR + D+ Sbjct: 140 VRGQKLPIFSASGLPHNDLALQIARQATVPEESAEDEATDEPGSEEADDGELGEGADDEG 199 Query: 190 ----VIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEY 244 VI +G E EFI+D+ L++SVV + +D+ + R++ P A+T AEY Sbjct: 200 SEFAVIFGAMGITAEEANEFIDDFERTGALERSVVFMNLADDPAVERQVTPRLALTTAEY 259 Query: 245 FS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 + KG +VL+IL +T + ++REI E+P RGYP ++++L +L ER G + Sbjct: 260 LAFEKGYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIKGR 319 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 +G++T + + + GD+ PI D I +G IV++R L +G PPVD L S+SRL D Sbjct: 320 EGSVTQIPILTMPGDDDTHPIPDLTGYITEGQIVMDRDLNSQGIEPPVDVLPSLSRLMD 378 >gi|219552182|gb|ACL26806.1| ATP synthase beta chain [Glochidion lanceolatum] gi|219552186|gb|ACL26808.1| ATP synthase beta chain [Glochidion zeylanicum] Length = 423 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D ++ I P + F+TGI+V+D+ P Sbjct: 85 ATLGRIFNVLGEPVD---ELGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 380 ELQDIIAILG 389 >gi|149384650|gb|ABR25136.1| ATP synthase beta chain [Polyphlebium borbonicum] Length = 385 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/306 (32%), Positives = 157/306 (51%), Gaps = 22/306 (7%) Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D S+ I P + F+TGI+V+D+ P G Sbjct: 1 IFNVLGEPVD---NLGPVDTSITFPIHRSAPASTQLDTKLSIFETGIKVVDLLAPYRRGG 57 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 58 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQN 117 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 118 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 177 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 178 ALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTSA 235 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388 LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E +D Sbjct: 236 HLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQD 294 Query: 389 IRLIGG 394 I I G Sbjct: 295 IIAILG 300 >gi|7708454|emb|CAB89918.1| ATP synthase beta subunit [Jasminum polyanthum] Length = 473 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E K+ + + R+ Sbjct: 320 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|71277382|gb|AAZ29871.1| ATP synthase beta subunit [Nitella axilliformis] gi|71277384|gb|AAZ29872.1| ATP synthase beta subunit [Nitella axilliformis] Length = 348 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 28 LGRIFNVLGEPVD---NLGPVDTTTTFPIHRSAPAFTDLDTKLSIFETGIKVVDLLAPYR 84 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 85 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 144 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 145 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 204 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 205 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 262 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 263 TFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKETLQRYKE 321 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 322 LQDIIAILG 330 >gi|110915664|gb|ABH02620.1| ATP synthase beta subunit [Lolium perenne] gi|110915666|gb|ABH02621.1| ATP synthase beta subunit [Lolium rigidum] Length = 472 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 79 ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 135 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 195 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 196 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 255 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 256 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 313 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 314 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 373 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 374 ELQDIIAILG 383 >gi|110915628|gb|ABH02602.1| ATP synthase beta subunit [Dielsiochloa floribunda] Length = 475 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 81 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 137 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 198 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 257 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 315 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 316 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 375 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 376 KELQDIIAILG 386 >gi|110915640|gb|ABH02608.1| ATP synthase beta subunit [Hookerochloa eriopoda] Length = 471 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 77 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 254 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 311 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 312 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 371 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 372 KELQDIIAILG 382 >gi|119350469|gb|ABL63185.1| AtpB [Pseudochlorella sp. CCAP 211/1A] Length = 392 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 159/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG D + I P ++ F+TGI+V+D+ P Sbjct: 39 GRIFNVLGEPVD---NLGPVDAKEGLPIHRSAPLFVDLDTKLSIFETGIKVVDLLAPYRR 95 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 96 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINE 155 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 DN+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 156 DNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSE 215 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 216 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 273 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + ++ + R++E Sbjct: 274 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYECAQNVKETLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|113910822|gb|ABI48143.1| ATPase beta subunit [Fossombronia pusilla] Length = 472 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 158/310 (50%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D I P F+TGI+V+D+ P Sbjct: 85 LGRIFNVLGEPVD---NLGPVSSDTMFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 141 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 142 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 200 Query: 212 D--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 D N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 201 DEQNISQSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 260 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 261 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 318 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 319 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 377 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 378 ELQDIIAILG 387 >gi|68445583|dbj|BAE03291.1| membrane-associated ATPase beta chain [Candidatus Caldiarchaeum subterraneum] Length = 466 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 16/282 (5%) Query: 91 GRFRISP-SACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148 GR +P S GRV + LG+PIDG D + + L + P R+ +TG Sbjct: 80 GRTMETPVSTEMLGRVFDGLGRPIDGLPDPIAEDVLDVNGEPINPE--QREYPSDFIQTG 137 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV 202 I ID L GQ++ +F+G+G+ + L + AR VI + VG + E Sbjct: 138 ISAIDGMNSLVRGQKLPIFSGAGLPHNMLAAQIARQATVPGKEEEFAVIFAAVGVQNDEA 197 Query: 203 REF---IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258 R F +E+ +K+S + + +D+ I R + P A+T+AEY + K G +VL+I+ Sbjct: 198 RYFRRSLEE--SGAIKRSALFLNLADDPAIERIVTPRIALTLAEYLAFKQGYHVLVIITD 255 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 IT +A ++RE++ E+P +GYP ++++L L ER G + KG++T + + + D Sbjct: 256 ITNYAEALREVSAAREEVPGRKGYPGYMYTDLASLYERAGRIKGLKGSLTQMPILSMPSD 315 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + PI D I +G IVL+R L +G YPP++ L S+SRL Sbjct: 316 DITHPIPDLTGYITEGQIVLSRDLYRKGIYPPINVLMSLSRL 357 >gi|169142694|ref|YP_001687121.1| ATP synthase beta subunit [Oenothera argillicola] gi|190358690|sp|B0Z4L0|ATPB_OENAR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|159792932|gb|ABW98688.1| ATP synthase beta subunit [Oenothera argillicola] Length = 498 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 151/306 (49%), Gaps = 20/306 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGDEHYETAQRVKETLQRY 398 Query: 384 EETRDI 389 +E +DI Sbjct: 399 KELQDI 404 >gi|55056896|emb|CAF21949.1| ATP synthase beta subunit [Juniperus chinensis] Length = 439 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLG---------DLVFHWGRFRISPSACWCGR 104 KN+D GQ I + ++ + +++ ++ G + GR Sbjct: 15 KNNDTTGQPISVTCEVQQLLGNNKVRAVAMSATDGLMRGMKVIDTGGPLSVPVGETTLGR 74 Query: 105 VINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D L+ + + PA + ++ +TGI+V+D+ P G Sbjct: 75 IFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDIKFSILETGIKVVDLLAPYRRGG 131 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 132 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 190 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 191 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 250 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 251 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 308 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + + E + + + R++E +D Sbjct: 309 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGKEHYETAQGVKQTLQRYKELQD 368 Query: 389 IRLIGG 394 I I G Sbjct: 369 IIAILG 374 >gi|149798711|gb|ABR32046.1| ATP synthase beta chain [Onychium japonicum] Length = 426 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + +++ I P F+TGI+V+D+ P Sbjct: 39 LGRIFNVLGEPVD---NLGPVRNNITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYR 95 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 96 RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 154 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 NEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAG 214 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 SEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 272 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 273 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 332 ELQDIIAILG 341 >gi|37544933|gb|AAN07065.1| ATP synthase beta subunit [Trimenia moorei] Length = 427 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 34 GSTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLLIFETGIKVVDLLA 90 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 91 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 150 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I+RF Sbjct: 151 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNISRFVQ 210 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 211 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPA 268 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 269 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGTDHYETAQRIKQTLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|164566069|gb|ABY61177.1| ATP synthase beta subunit [Danaea crispa] Length = 394 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 159/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVDVGTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V + DP + Sbjct: 185 VSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPAXDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|21684917|emb|CAD11585.1| ATP synthase beta subunit [Prionium palmita] Length = 406 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 153/310 (49%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 14 ATLGRIFNVLGEPVD---NLGAVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 70 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 71 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGV 130 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 131 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 190 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG IT++ +V V D+ DP Sbjct: 191 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAP 248 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + E + + + R++ Sbjct: 249 ATTFAHLDATTVLSRPLAAKGIYPAVDPLDSTSTMLQPGIVGKEHYETAQRVKQTLQRYK 308 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 309 ELQDIIAILG 318 >gi|6689231|emb|CAB65406.1| ATP synthase beta subunit [Scrophularia californica] Length = 498 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|14718165|gb|AAK72821.1| ATP synthase beta subunit [Pedicularis coronata] Length = 496 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|307931034|dbj|BAJ21378.1| ATP synthase CF1 beta subunit [Pterosperma cristatum] Length = 394 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 160/312 (51%), Gaps = 28/312 (8%) Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID +G D + + I P ++ F+TGI+V+D+ P Sbjct: 69 LGRIFNVLGQPID---EMGSVDYTKTLPIHRLAPEFIDLDTKLSIFETGIKVVDLLAPYR 125 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGVI 184 Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + LGD+ K +V +E P R LTA+T+AE+F +VLL +D+I RF Sbjct: 185 NDQNLGDS--KVALVYGQMNEPPGARMRVGLTALTMAEFFRDVNNQDVLLFIDNIFRFVQ 242 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 243 AGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKTGSITSIQAVYVPADDLTDPA 300 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHR 382 + + LD VL+R+LA +G YP VDPL S S + + W E+ + + + R Sbjct: 301 PATTFAHLDATTVLSRNLASKGIYPAVDPLDSTSTML-QPWIVGEEHYGVAQGVKKTLQR 359 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 360 YKELQDIIAILG 371 >gi|303237321|ref|ZP_07323891.1| ATP synthase F1, beta subunit [Prevotella disiens FB035-09AN] gi|302482708|gb|EFL45733.1| ATP synthase F1, beta subunit [Prevotella disiens FB035-09AN] Length = 508 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 97/330 (29%), Positives = 155/330 (46%), Gaps = 41/330 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +GKPIDG + L + + I + P ++ TGI+VID+ P G Sbjct: 95 GRMMNVIGKPIDGMEELHM-EGAYPIHREAPKFDELSTQKEMLATGIKVIDLLEPYMKGG 153 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL-------GD 212 +IG+F G+G+GK+ L+ + + + VGER RE + I D L G+ Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLIRDMLESGVIRYGE 213 Query: 213 NLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250 +K++ +V +E P R L+ +T+AE F G Sbjct: 214 KFRKAMDEGKWDLSLIDKEEIKKSQATLVYGQMNEPPGARASVALSGLTVAEEFRDHGGK 273 Query: 251 -----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKG 305 +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + +KG Sbjct: 274 DGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTKKG 331 Query: 306 NITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW 365 +IT+V +V V D+ DP + + LD L+R + E G YP VDPL S SR+ D Sbjct: 332 SITSVQAVYVPADDLTDPAPATTFTHLDATTELSRKITELGIYPAVDPLGSTSRILDPLV 391 Query: 366 SADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 E + L+ + E +DI I G Sbjct: 392 VGKEHYDCAQRVKQLLQHYNELQDIIAILG 421 >gi|110915672|gb|ABH02624.1| ATP synthase beta subunit [Molineriella laevis] Length = 475 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 81 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 137 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 198 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 257 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 315 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 316 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 375 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 376 KELQDIIAILG 386 >gi|110915674|gb|ABH02625.1| ATP synthase beta subunit [Parafestuca albida] Length = 473 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 80 ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 136 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 137 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 196 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 197 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 256 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 257 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPAP 314 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 315 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 374 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 375 ELQDIIAILG 384 >gi|110915594|gb|ABH02585.1| ATP synthase beta subunit [Bellardiochloa variegata] Length = 475 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 81 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 137 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 138 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 197 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 198 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 257 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 258 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 315 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 316 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 375 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 376 KELQDIIAILG 386 >gi|110915586|gb|ABH02581.1| ATP synthase beta subunit [Avena sativa] Length = 474 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 80 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 136 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 196 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 197 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 256 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 314 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 315 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 374 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 375 KELQDIIAILG 385 >gi|42559022|gb|AAS20197.1| ATP synthase beta subunit [Elegia fenestrata] Length = 478 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P ++ F+TGI+V+D+ P Sbjct: 91 ATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 147 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 148 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 207 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 208 INEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFVQA 267 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +K +IT++ +V V D+ DP Sbjct: 268 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTDPAP 325 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 326 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQRYK 385 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 386 ELQDIIAILG 395 >gi|212896644|gb|ACJ38525.1| membrane-bound ATP synthase subunit B [Lespedeza frutescens] Length = 469 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 87 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKQTLQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|164566087|gb|ABY61186.1| ATP synthase beta subunit [Danaea geniculata] Length = 394 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D G D+ ++ + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAILG 309 >gi|110915656|gb|ABH02616.1| ATP synthase beta subunit [Holcus annuus] gi|110915678|gb|ABH02627.1| ATP synthase beta subunit [Phleum pratense] Length = 476 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 318 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 377 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 378 ELQDIIAILG 387 >gi|110915582|gb|ABH02579.1| ATP synthase beta subunit [Anthoxanthum odoratum] Length = 490 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915648|gb|ABH02612.1| ATP synthase beta subunit [Graphephorum wolfii] Length = 474 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 80 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 136 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 137 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 196 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 197 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 256 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 257 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 314 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 315 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 374 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 375 KELQDIIAILG 385 >gi|110915660|gb|ABH02618.1| ATP synthase beta subunit [Leucopoa kingii] Length = 474 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 81 ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 137 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 138 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 197 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 198 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 257 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 258 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 315 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 316 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 375 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 376 ELQDIIAILG 385 >gi|119350473|gb|ABL63187.1| AtpB [Chlorella sorokiniana] Length = 389 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + D + I P ++ F+TGI+V+D+ P G Sbjct: 36 GRIFNVLGEPVDNLGPVNTKD-QLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYRRGG 94 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 95 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINESN 154 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 155 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 214 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 215 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 272 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R+LA +G YP VDPL S S + D+ + ++ + R++E +DI Sbjct: 273 HLDATTVLSRNLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDI 332 Query: 390 RLIGG 394 I G Sbjct: 333 IAILG 337 >gi|149384661|gb|ABR25139.1| ATP synthase beta chain [Lindsaea quadrangularis] Length = 426 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 39 LGRIFNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 96 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESKVIN 155 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 156 EKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 274 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 333 LQDIIAISG 341 >gi|110915598|gb|ABH02587.1| ATP synthase beta subunit [Briza minor] Length = 490 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|118411134|ref|YP_874528.1| ATP synthase CF1 beta chain [Thalassiosira pseudonana] gi|224015776|ref|XP_002297536.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|125987721|sp|A0T0R6|ATPB_THAPS RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|116739881|gb|ABK20751.1| ATP synthase CF1 beta chain [Thalassiosira pseudonana] gi|220967800|gb|EED86176.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 474 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N +G+P+D GD + D ++ I P + F+TGI+V+D+ P Sbjct: 90 LGRIFNVIGEPVDEQGDVVV---DQTLPIHRDAPAFTELETKPSIFETGIKVVDLLAPYR 146 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ + A++ V + ER RE + E+ + Sbjct: 147 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYEEMKESGVI 205 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 206 NSSNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFTQAG 265 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 266 SEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPAPA 323 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-EKKLVSSLTHLIHRFEE 385 + + LD VL+R+LA +G YP VDPL S S + ++ + ++ + R++E Sbjct: 324 TTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPGIVSEVHYETAETVKETLQRYKE 383 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 384 LQDIIAILG 392 >gi|20467387|gb|AAL27824.1| ATPase beta subunit [Ephedra equisetina] Length = 458 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 82 LGRIFNVLGEPVD---NLGPIDTSTTFXIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 138 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + + VGER RE + + + Sbjct: 139 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 198 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 K +V +E P R L A+T+AEYF + +VLL +D+I RF + Sbjct: 199 EKNIIESKVALVYGQMNEPPGARMRVGLPALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 258 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 259 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAPAT 316 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVS-RLADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S L + ++ + + R++E Sbjct: 317 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSAMLQPRIVGEKHYEIAQEVKQTLQRYKEL 376 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 377 QDIIAILG 384 >gi|14017579|ref|NP_114266.1| ATP synthase CF1 beta subunit [Triticum aestivum] gi|114574|sp|P20858|ATPB_WHEAT RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|473690|gb|AAA84726.1| ATP synthase beta subunit [Triticum aestivum] gi|13928212|dbj|BAB47041.1| ATPase beta subunit [Triticum aestivum] Length = 498 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|323715470|gb|ADY04803.1| ATP synthase beta subunit [Dichroa febrifuga] Length = 479 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 91 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 209 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 269 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 327 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R++E Sbjct: 328 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKE 387 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 388 LQDIIAILG 396 >gi|315427405|dbj|BAJ49013.1| V-type H+-transporting ATPase subunit B [Candidatus Caldiarchaeum subterraneum] Length = 465 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 16/282 (5%) Query: 91 GRFRISP-SACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148 GR +P S GRV + LG+PIDG D + + L + P R+ +TG Sbjct: 79 GRTMETPVSTEMLGRVFDGLGRPIDGLPDPIAEDVLDVNGEPINPE--QREYPSDFIQTG 136 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV 202 I ID L GQ++ +F+G+G+ + L + AR VI + VG + E Sbjct: 137 ISAIDGMNSLVRGQKLPIFSGAGLPHNMLAAQIARQATVPGKEEEFAVIFAAVGVQNDEA 196 Query: 203 REF---IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258 R F +E+ +K+S + + +D+ I R + P A+T+AEY + K G +VL+I+ Sbjct: 197 RYFRRSLEE--SGAIKRSALFLNLADDPAIERIVTPRIALTLAEYLAFKQGYHVLVIITD 254 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 IT +A ++RE++ E+P +GYP ++++L L ER G + KG++T + + + D Sbjct: 255 ITNYAEALREVSAAREEVPGRKGYPGYMYTDLASLYERAGRIKGLKGSLTQMPILSMPSD 314 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + PI D I +G IVL+R L +G YPP++ L S+SRL Sbjct: 315 DITHPIPDLTGYITEGQIVLSRDLYRKGIYPPINVLMSLSRL 356 >gi|257853488|gb|ACV71746.1| ATP synthase beta subunit [Dissiliaria muelleri] Length = 489 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211 P G +IG+F G+G+GK+ L+ + + + VGER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKEHGGVSVFGGVGERTREGNDLYKEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + E + S+ + R+ Sbjct: 331 PATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTSTMLQPNIVGTEHYETAQSVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|242399766|ref|YP_002995191.1| A1A0 ATP synthase, subunit B [Thermococcus sibiricus MM 739] gi|242266160|gb|ACS90842.1| A1A0 ATP synthase, subunit B [Thermococcus sibiricus MM 739] Length = 467 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 97/319 (30%), Positives = 160/319 (50%), Gaps = 23/319 (7%) Query: 88 FHWGRFRISPSACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKG 144 F ++ S GRV N +G+PIDG + + D+ ++ V A R ++ Sbjct: 78 FTGETLKVPVSMDMLGRVFNGIGEPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQ-- 135 Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS-------DCFDKVIISLVGE 197 TGI ID L GQ++ +F+GSG+ + L + AR + F V+ + +G Sbjct: 136 --TGISAIDGMNTLVRGQKLPIFSGSGLPHNMLAAQIARQAKVLGEEEQF-AVVFAAMGI 192 Query: 198 RGREVREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLI 255 E F + + ++++V+ + +D+ I R + P A+T+AEY + D VL+I Sbjct: 193 TYEEANFFKKSFEETGAIERAVLFLNLADDPAIERIITPRMALTVAEYLAFDYDMQVLVI 252 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 L +T +A ++REI+ E+P RGYP ++++L + ER G KG+IT + + + Sbjct: 253 LTDMTNYAEALREISAAREEVPGRRGYPGYMYTDLATIYERAGRVRGRKGSITQMPILTM 312 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKK 371 D+ PI D I +G IVL+R L +G YPP+D L S+SRL K + +E Sbjct: 313 PDDDITHPIPDLTGYITEGQIVLSRDLHRKGIYPPIDVLPSLSRLMKDGIGKGRTREEHS 372 Query: 372 LVSSLTHLIHRFEETRDIR 390 +S L + E R +R Sbjct: 373 QLSQ--QLYAAYAEGRSLR 389 >gi|241912860|gb|ACS72108.1| AtpB [Goodyera pubescens] Length = 489 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D+ + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|228015941|gb|ACP50781.1| ATP synthase CF1 beta subunit [Pinus ponderosa] Length = 492 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 24/317 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G ++ I P F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDAG-ITSPIHRPAPAFTELDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESGV 219 Query: 211 GDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 D K K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 220 IDEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPTDDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGGYRPGVD 400 +E +DI I PG+D Sbjct: 397 KELQDIIAI----PGLD 409 >gi|12004129|gb|AAG43904.1|AF213773_1 ATP synthase beta subunit [Cyclamen hederifolium] Length = 482 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 160/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 219 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E+ +G++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 220 GVINEENIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 277 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 278 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 335 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 336 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 395 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 396 QRYKELQDIIAILG 409 >gi|110915630|gb|ABH02603.1| ATP synthase beta subunit [Dupontia fisheri] Length = 474 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 81 ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 137 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 138 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 197 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 198 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 257 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 258 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 315 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 316 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 375 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 376 ELQDIIAILG 385 >gi|110915638|gb|ABH02607.1| ATP synthase beta subunit [Festuca subverticillata] Length = 490 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|20269446|gb|AAM17950.1| ATP synthase beta subunit [Vaccinium uliginosum] Length = 432 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ P Sbjct: 61 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELETKLSIFETGIKVVDLLAP 117 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 118 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKXMKETG 176 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R TA+T+AEYF +VLL +D+I RF Sbjct: 177 VINEQNIAESKVALVYGQMNEPPGARMRVXXTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 236 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 237 AGSEVSALLGRIPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 294 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + D+ K+ + + R+ Sbjct: 295 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYKIAQKVKQTLQRY 354 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 355 KELQDIIAILG 365 >gi|327537654|gb|EGF24365.1| F0F1 ATP synthase subunit beta [Rhodopirellula baltica WH47] Length = 491 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 88/268 (32%), Positives = 142/268 (52%), Gaps = 10/268 (3%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPL 158 R+ + G ID + L ++ + + PP ++R+ + F+TGI+VID+ PL Sbjct: 89 ALLSRMFDVFGNTIDRGEELS--EVERRSVHRDPPLLSRRSTKSEVFETGIKVIDVLVPL 146 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-L 214 G + G+F G+G+GK+ LL+ + + +S+ +GER RE E + L Sbjct: 147 ERGGKAGLFGGAGVGKTVLLTELIHNMVGKQKGVSIFCGIGERCREGEELYREMKDAGVL 206 Query: 215 KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNS 273 K +V +E P R A+T+AEYF + +VLL++D+I RF + E++ Sbjct: 207 KDMAMVFGQMNEPPGARFRVGHVALTMAEYFRDDEHRDVLLLIDNIFRFIQAGMEVSGLM 266 Query: 274 GELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILD 333 G++P GY ++ +EL L ERI + + G IT++ +V V D+ DP A S L Sbjct: 267 GQMPSRLGYQPTMGTELASLEERI--ANTDTGAITSIQAVYVPADDFTDPAAAHTFSHLS 324 Query: 334 GHIVLNRSLAEEGRYPPVDPLASVSRLA 361 IVL+R A EG +P +DPL S S++A Sbjct: 325 ASIVLSRKRASEGLFPAIDPLQSSSKMA 352 >gi|307289038|ref|ZP_07568994.1| ATP synthase [Enterococcus faecalis TX0109] gi|306499747|gb|EFM69108.1| ATP synthase [Enterococcus faecalis TX0109] gi|315163949|gb|EFU07966.1| ATP synthase ab [Enterococcus faecalis TX1302] Length = 458 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 21/320 (6%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ IN D + I++ D + H +SP GRV + LG+ D Sbjct: 42 GQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPD--MMGRVFDGLGRLKDN 99 Query: 116 DDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 L K D++ E+++ V R ++ +TGI ID L GQ++ VF+ SG+ Sbjct: 100 GPELLPEKKLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGL 155 Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 L + AR S+ V+ + +G E F+ED+ + +SV+ + ++ Sbjct: 156 PHKELAAQIARQANVLNSEEEFAVVFAAIGITFEEAEYFMEDFRQTGAIDRSVLFMNLAN 215 Query: 226 ESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 + I R P A+T AEY + KG +VL+I+ +T + ++REI+ E+P RGYP Sbjct: 216 DPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPG 275 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 +++ L L ER G KG++T + + + ++ PI D I +G I+L+R L + Sbjct: 276 YLYTNLATLYERAGRIRDSKGSVTQIPILTMPEEDKTHPIPDLTGYITEGQIILSRELYK 335 Query: 345 EGRYPPVDPLASVSRLADKA 364 G PP+D L S+SRL DK Sbjct: 336 SGIQPPIDVLPSLSRLKDKG 355 >gi|270313039|gb|ACZ73601.1| ATP synthase beta subunit [Cneorum tricoccon] Length = 495 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 158 PYRRGGKIGLFGGAGVGKTXLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDGNEQDVLLFIDNIFRFVQ 277 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 336 PATXFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 395 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 396 KELQDIIAILG 406 >gi|156598493|gb|ABU85505.1| ATP synthase CF1 beta subunit [Passiflora biflora] Length = 498 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---ELGPVDTRTTSPIHRSAPTFIQLDTKFSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN 213 P G +IG+F G+G+GK+ L+ + +S+ VGER RE + + Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYVEMKESG 220 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++ +IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEASITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRRLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|156530085|gb|ABU75139.1| AtpB [Swietenia mahagoni] Length = 439 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 160/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D L+ + K PA + + F+TGI+V+D+ Sbjct: 45 GATLGRIFNVLGEPVD---NLGPVDTLTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 101 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 102 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 161 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 162 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 221 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 222 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 279 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 280 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 339 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 340 KELQDIIAILG 350 >gi|21684915|emb|CAD11584.1| ATP synthase beta subunit [Restio paludosus] Length = 491 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P ++ F+TGI+V+D+ P Sbjct: 99 ATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 155 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 215 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 216 INEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFVQA 275 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +K +IT++ +V V D+ DP Sbjct: 276 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTDPAP 333 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 334 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQRYK 393 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 394 ELQDIIAILG 403 >gi|305671681|gb|ADM63150.1| ATP synthase beta subunit [Zabelia tyaihyoni] Length = 489 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFV 271 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 329 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + ++ + + + R Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGNKHYETAQRVKQTLQR 389 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 390 YKELQDIIAILG 401 >gi|270313035|gb|ACZ73599.1| ATP synthase beta subunit [Cneorum tricoccon] Length = 498 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|12004133|gb|AAG43906.1|AF213775_1 ATP synthase beta subunit [Androsace sp. Anderberg s.n.] Length = 483 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 20/317 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIR 150 R+ GR+ N LG+P+D +LG D + I P + F+TGI+ Sbjct: 98 LRVPVGGATLGRIFNVLGEPVD---NLGPVDTXTTSPIHRSAPAFIQLDTKLSIFETGIK 154 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 214 Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+ Sbjct: 215 EMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 274 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D Sbjct: 275 IFRFGQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPAD 332 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377 + DP + + LD VL+R LA +G YP VDPL S S + +E + + Sbjct: 333 DLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVK 392 Query: 378 HLIHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 393 ETLQRYKELQDIIAILG 409 >gi|5001601|gb|AAD37047.1|AF092121_1 ATP synthase beta subunit [Schumacheria sp. SH1999] Length = 494 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 100 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 217 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 334 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 335 PXTTFXHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 394 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 395 KELQDIIAILG 405 >gi|4206598|gb|AAD11730.1| ATP synthase beta subunit [Sarcomelicope simplicifolia] Length = 471 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 160/313 (51%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 86 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +K+ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 200 Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262 SVV+ +A S +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 201 SVVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 260 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 261 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 318 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 319 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 378 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 379 RYKELQDIIAILG 391 >gi|110915614|gb|ABH02595.1| ATP synthase beta subunit [Cutandia memphitica] Length = 475 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG + + I P + F+TGI+V+D+ P Sbjct: 82 ATLGRIFNVLGEPVD---NLGPVESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 138 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 139 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 198 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 199 INEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 258 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 259 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 316 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 317 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 376 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 377 ELQDIIAILG 386 >gi|110915708|gb|ABH02642.1| ATP synthase beta subunit [Vahlodea atropurpurea] Length = 490 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915572|gb|ABH02574.1| ATP synthase beta subunit [Aira cupaniana] Length = 481 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 87 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 204 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 322 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|110915592|gb|ABH02584.1| ATP synthase beta subunit [Beckmannia syzigachne] Length = 472 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 195 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|16416760|gb|AAL18403.1|AF313557_1 ATP synthase beta chain [Sphagnum palustre] Length = 394 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + PA + + F+TGI+V+D+ P Sbjct: 5 ATLGRIFNVLGEPVD---NLGPVDAGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 61 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 62 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 121 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 122 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 181 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 182 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 239 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 240 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 298 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 299 KELQDIIAILG 309 >gi|62902869|gb|AAY19349.1| ATP synthase beta subunit [Lagenaria breviflora] gi|66276283|gb|AAY44156.1| ATP synthase beta subunit [Lagenaria breviflora] Length = 488 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|293363527|ref|ZP_06610283.1| ATP synthase F1, beta subunit [Mycoplasma alligatoris A21JP2] gi|292552876|gb|EFF41630.1| ATP synthase F1, beta subunit [Mycoplasma alligatoris A21JP2] Length = 461 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 107/413 (25%), Positives = 207/413 (50%), Gaps = 26/413 (6%) Query: 23 GGYISSITSVYYTVTCLSQYVCLGDFVV--HQGKN----SDNLGQVIRINLDIVYICPVG 76 G I SI++ V +++ + + V+ H+G + L + + + + I P+ Sbjct: 2 NGIIKSISTDVVKVEFQEEFMPMANHVLTLHKGNTYLLVKNALSKTLVSAIVVYNIAPIN 61 Query: 77 IGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAM 136 +G+E+ V F + G V + G ID + + KG +E M+ + P Sbjct: 62 VGDEV-----VNTKKSFMVPVGDAAKGHVYDFTGHAID-TNPIDKGLKHVE-MNSIAPKD 114 Query: 137 NRQRV-EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDCFDKV 190 N +V E+ +TGI+V+D F P+ G ++G+F G+G+GK+ L+ + +++ + Sbjct: 115 NIIKVNEEILETGIKVVDFFIPIFKGYKLGIFGGAGVGKTVLMKEIIFNTLKQNNTNSSI 174 Query: 191 IISLVGERGREVREFIEDYLGDNL-KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-K 248 I GER RE E ++ NL S++ ++ +ESP R +T AEY + Sbjct: 175 FIG-SGERSREGIELYQELTDSNLMANSMLFISKMNESPGARMNIVPIGITSAEYLRDVQ 233 Query: 249 GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNIT 308 +NVLL +D+I R+ + E + + G+ P GY +++ S++ + +R+ ++ G+IT Sbjct: 234 NENVLLFIDNIYRYIQAGNEASASLGKKPSIGGYQSTLDSDVATIEDRLFANQN--GSIT 291 Query: 309 AVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSA 367 + +V + D+ +DP A ++ + LD +VL+R L + +P +DPLAS + + D K Sbjct: 292 SFQTVFLPMDDISDPSAVAIFNHLDSTLVLSRELTSKNIFPAIDPLASSTNIVDEKVLGH 351 Query: 368 DEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQS 420 + + + ++ ++EE D+ I G +D + VH+ + +F Q+ Sbjct: 352 EHYEAIIETKRILKKYEELEDVISIFGVD-DLDEENKEIVHKALQLQNFFTQN 403 >gi|113910808|gb|ABI48136.1| ATPase beta subunit [Radula complanata] Length = 464 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 101/312 (32%), Positives = 159/312 (50%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG ++S P PA + + F+TGI+V+D+ P Sbjct: 75 ATLGRIFNVLGEPVD---DLGPVNVSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 131 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 132 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 190 Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 191 VINEQKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 250 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 251 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 308 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + R Sbjct: 309 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDTAQGVKQTLQR 367 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 368 YKELQDIIAILG 379 >gi|313199709|ref|YP_004021323.1| ATP synthase CF1 beta subunit [Theobroma cacao] gi|309321273|gb|ADO64816.1| ATP synthase CF1 beta subunit [Theobroma cacao] Length = 498 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSTIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|160881199|ref|YP_001560167.1| V-type ATP synthase subunit B [Clostridium phytofermentans ISDg] gi|160429865|gb|ABX43428.1| H+transporting two-sector ATPase alpha/beta subunit central region [Clostridium phytofermentans ISDg] Length = 460 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 92/312 (29%), Positives = 159/312 (50%), Gaps = 18/312 (5%) Query: 98 SACWCGRVINALGKPIDGD-DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S RV + LG+PIDG + L + + + + P A R ++ +TG+ ID Sbjct: 82 SEDMLSRVFDGLGRPIDGGPEILPEKRMDINGLPMNPVA--RNYPQEFIQTGVSAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY 209 L GQ++ +F+ SG+ + L + AR ++ F V+ + +G E F E + Sbjct: 140 TLVRGQKLPIFSASGLPHAELAAQIARQAKVRGTNEAF-AVVFAAMGITFEEANFFTESF 198 Query: 210 LGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 + ++V+ V +++ + R P A+T AEY + + D +VL+IL IT +A S+R Sbjct: 199 KETGAIDRTVMFVNLANDPAVERIATPRMALTAAEYLAFEKDMHVLVILTDITNYADSLR 258 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ E+P RGYP ++++L L ER G + + G+IT + + + D+ PI D Sbjct: 259 EVSAARKEVPGRRGYPGYMYTDLASLYERAGRQKGKNGSITMIPILTMPEDDKTHPIPDL 318 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLTHLIHR 382 I +G I+L+R L +G PP+D L S+SRL DK D ++ L R Sbjct: 319 TGYITEGQIILSRDLYRQGVTPPIDVLPSLSRLKDKGIGEGKTRKDHANTMNQLFAAYAR 378 Query: 383 FEETRDIRLIGG 394 +E +++ ++ G Sbjct: 379 GKEAKELMVVLG 390 >gi|4063546|gb|AAC98331.1| ATP synthase beta subunit [Francoa appendiculata] Length = 456 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|305671621|gb|ADM63120.1| ATP synthase beta subunit [Triosteum perfoliatum] Length = 489 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 107/366 (29%), Positives = 171/366 (46%), Gaps = 31/366 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D GQ I + ++ V + E ++ G V G + GR Sbjct: 42 KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 101 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLAPYRRGG 158 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ + Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESGVINEQ 217 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF NVLL +D+I RF + E+ Sbjct: 218 NIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQAGSEV 277 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPAPATTF 335 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEETRD 388 + LD VL+R LA +G YP VDPL S S + + + + + R++E +D Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGKNHYETAQRVKQTLQRYKELQD 395 Query: 389 IRLIGG 394 I I G Sbjct: 396 IIAILG 401 >gi|110915692|gb|ABH02634.1| ATP synthase beta subunit [Rostraria pubescens] gi|110915706|gb|ABH02641.1| ATP synthase beta subunit [Trisetum cernuum subsp. canescens] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915620|gb|ABH02598.1| ATP synthase beta subunit [Deschampsia cespitosa subsp. cespitosa] Length = 472 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 79 ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 135 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 195 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 196 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 255 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 256 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPAP 313 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 314 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 373 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 374 ELQDIIAILG 383 >gi|110915578|gb|ABH02577.1| ATP synthase beta subunit [Amphibromus scabrivalvis] gi|110915604|gb|ABH02590.1| ATP synthase beta subunit [Calamagrostis arundinacea] gi|110915702|gb|ABH02639.1| ATP synthase beta subunit [Torreyochloa pallida var. pauciflora] gi|110915704|gb|ABH02640.1| ATP synthase beta subunit [Triplachne nitens] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915652|gb|ABH02614.1| ATP synthase beta subunit [Helictotrichon convolutum] gi|110915654|gb|ABH02615.1| ATP synthase beta subunit [Helictotrichon mortonianum] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|61968227|gb|AAX57040.1| ATP synthase beta subunit [Bridelia ferruginea] Length = 479 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 155/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPVD---DLGPVDTRATYPIHRSAPAFIELDTELSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKDSGV 209 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 210 INKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S L + + S+ + R++ Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGTKHYETAQSVKQTLQRYK 387 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 388 ELQDIIAILG 397 >gi|7708167|emb|CAB90026.1| ATP synthase beta subunit [Bersama lucens] Length = 485 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 96 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 152 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 213 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 330 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYK 390 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 391 ELQDIIAILG 400 >gi|20467359|gb|AAL27810.1| ATPase beta subunit [Ephedra americana] Length = 427 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 82 LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 138 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS-- 217 G +IG+F G+G+GK+ L+ + +S+ G G RE + ++ +K+S Sbjct: 139 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDPHM--EMKESGV 196 Query: 218 -----------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 197 INEKNIIESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 256 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 257 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 314 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S L + ++ + + R++ Sbjct: 315 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYK 374 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 375 ELQDIIAILG 384 >gi|323715478|gb|ADY04807.1| ATP synthase beta subunit [Hydrangea serrata] Length = 482 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 91 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 209 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 269 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 327 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R++E Sbjct: 328 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKE 387 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 388 LQDIIAILG 396 >gi|257413219|ref|ZP_04742355.2| V-type sodium ATPase, B subunit [Roseburia intestinalis L1-82] gi|257204259|gb|EEV02544.1| V-type sodium ATPase, B subunit [Roseburia intestinalis L1-82] gi|291539214|emb|CBL12325.1| Archaeal/vacuolar-type H+-ATPase subunit B [Roseburia intestinalis XB6B4] Length = 462 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 26/362 (7%) Query: 49 VVHQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-----SACWCG 103 +V +GK LG+++ IN D + EE+SL L H R P S G Sbjct: 36 LVVEGKQK-KLGRIVEINNDYAVVQVFESTEEMSL--LNTH-ARLTGRPLCVGLSEEILG 91 Query: 104 RVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQR 163 R N LG+PIDG ++ ++ ++ + +R+ +TGI ID T L GQ+ Sbjct: 92 RTFNGLGQPIDGLGAV-HAEVVRDVNGQPMNPCSREYPRNYIRTGISAIDGLTTLIRGQK 150 Query: 164 IGVFAGSGIGKSTLLSMFARSDCFD---------KVIISLVGERGREVREFIEDYLGDNL 214 + +F+G+G+ L + V+ + +G + F + + Sbjct: 151 LPIFSGNGLPHDELAAQIVEQASLGDGENEDEPFAVVFAAMGVKYDVAEYFKRRFAECGV 210 Query: 215 KKSVVVVATSDESPILRKM-APLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATN 272 V + P+ ++ P A+T AEY + K ++L+IL +T FA ++RE++ Sbjct: 211 SDHVAMFLNLSNDPVAERLITPKVALTAAEYLAFEKNMHILVILTDMTSFAEAMREVSAQ 270 Query: 273 SGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSIL 332 GE+P +GYP ++SE L ER G G++T + + + D+ PI D I Sbjct: 271 KGEIPSRKGYPGYLYSEFAALYERAGIVNGASGSVTQIPILTMPNDDITHPIPDLTGYIT 330 Query: 333 DGHIVLNRSLAEEGRYPPVDPLASVSRL-----ADKAWSADEKKLVSSLTHLIHRFEETR 387 +G IVL RSL ++ YPP++ L S+SRL +K D + L + L R E R Sbjct: 331 EGQIVLERSLHQKNIYPPINVLPSLSRLMKDGIGEKYTREDHQDLANQLFSSYARVGEAR 390 Query: 388 DI 389 D+ Sbjct: 391 DL 392 >gi|110915684|gb|ABH02630.1| ATP synthase beta subunit [Poa billardierei] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915618|gb|ABH02597.1| ATP synthase beta subunit [Dactylis glomerata subsp. hackelii] Length = 471 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 77 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY + +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 254 AGSEVSALLGRMPSAVGYQPTXSTEMGXLQERIAXTKK--GSITSIQAVYVPADDXTDPA 311 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 312 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 371 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 372 KELQDIIAILG 382 >gi|160894636|ref|ZP_02075411.1| hypothetical protein CLOL250_02187 [Clostridium sp. L2-50] gi|156863570|gb|EDO57001.1| hypothetical protein CLOL250_02187 [Clostridium sp. L2-50] Length = 456 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 95/328 (28%), Positives = 163/328 (49%), Gaps = 19/328 (5%) Query: 98 SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + LG+PID G D L + + + P A R + +TGI ID Sbjct: 82 SEDMLGRVFDGLGRPIDKGPDILPEERRDINGLPMNPAA--RNYPSEFIQTGISAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ +F+ SG+ S L + AR +D V+ + +G E F E + Sbjct: 140 TLVRGQKLPIFSASGLPHSKLAAQIARQAKVRGTDEPFAVVFAAMGITFEEANFFTESFK 199 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268 + ++V+ + +++ + R P A+T AEY + K +VL+IL IT +A ++RE Sbjct: 200 ETGAIDRTVLFINLANDPAVERIATPRMALTAAEYLAFEKNMHVLVILTDITNYADALRE 259 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ E+P RGYP ++++L L ER G + G+IT + + + D+ PI D Sbjct: 260 VSAARKEVPGRRGYPGYMYTDLATLYERAGRQRGKNGSITMIPILTMPEDDKTHPIPDLT 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRFEET 386 I +G I+L+R L +G PP+D L S+SRL DK + + S++ L + Sbjct: 320 GYITEGQIILSRELYRKGVTPPIDVLPSLSRLKDKGTGEGKTRGDHSSTMNQLFAAYSRG 379 Query: 387 RDIRLIGGYRPGVDLILDKAVHQVPIIY 414 +D + + + ++ + A+ + I+Y Sbjct: 380 KDAKEL------MTILGESALSDIDILY 401 >gi|113910760|gb|ABI48112.1| ATPase beta subunit [Conocephalum conicum] Length = 472 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + + + PA + + F+TGI+V+D+ P Sbjct: 85 LGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 141 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 201 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 202 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 261 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 262 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 319 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 320 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 378 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 379 LQDIIAILG 387 >gi|8517661|emb|CAB94382.1| ATP synthase beta subunit [Silene nutans] Length = 488 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 158/310 (50%), Gaps = 18/310 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +G S + + PA + + F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNLGPVGTHTTSP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 219 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 220 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R++ Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 397 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 398 ELQDIIAILG 407 >gi|16416728|gb|AAL18388.1|AF313540_1 ATP synthase beta chain [Danaea elliptica] gi|164566079|gb|ABY61182.1| ATP synthase beta subunit [Danaea geniculata] gi|164566083|gb|ABY61184.1| ATP synthase beta subunit [Danaea geniculata] gi|164566085|gb|ABY61185.1| ATP synthase beta subunit [Danaea geniculata] gi|164566103|gb|ABY61194.1| ATP synthase beta subunit [Danaea leprieurii] gi|164566139|gb|ABY61212.1| ATP synthase beta subunit [Danaea sp. B MJMC-2008] gi|164566141|gb|ABY61213.1| ATP synthase beta subunit [Danaea sp. C MJMC-2008] Length = 394 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D G D+ ++ + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAILG 309 >gi|76577972|gb|ABA02340.2| ATP synthase CF1 beta chain [Tetraselmis suecica] Length = 484 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/308 (32%), Positives = 158/308 (51%), Gaps = 22/308 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG D + + I P ++ F+TGI+V+D+ P Sbjct: 98 GRIFNVLGQPVD---NLGPVDSTDGLTIHRTAPAFVDLDTKLAIFETGIKVVDLLAPYRR 154 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIKE 214 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 215 SNLTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGAE 274 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 275 VSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATT 332 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + R++E Sbjct: 333 FAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEEHYSCAQNVKQTLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|15644358|ref|NP_229410.1| F0F1 ATP synthase subunit beta [Thermotoga maritima MSB8] gi|148270311|ref|YP_001244771.1| F0F1 ATP synthase subunit beta [Thermotoga petrophila RKU-1] gi|170289062|ref|YP_001739300.1| ATP synthase F1, beta subunit [Thermotoga sp. RQ2] gi|281412618|ref|YP_003346697.1| ATP synthase F1, beta subunit [Thermotoga naphthophila RKU-10] gi|3913124|sp|O50550|ATPB_THEMA RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166222424|sp|A5ILX2|ATPB_THEP1 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|226740686|sp|B1LBB9|ATPB_THESQ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|4982182|gb|AAD36677.1|AE001805_2 ATP synthase F1, subunit beta [Thermotoga maritima MSB8] gi|2687836|emb|CAA75784.1| F1F0-ATPase beta subunit [Thermotoga maritima MSB8] gi|147735855|gb|ABQ47195.1| ATP synthase F1, beta subunit [Thermotoga petrophila RKU-1] gi|170176565|gb|ACB09617.1| ATP synthase F1, beta subunit [Thermotoga sp. RQ2] gi|281373721|gb|ADA67283.1| ATP synthase F1, beta subunit [Thermotoga naphthophila RKU-10] Length = 468 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 108/327 (33%), Positives = 172/327 (52%), Gaps = 16/327 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K I P + + + +TGI+VID+ P G Sbjct: 90 LGRILNVIGEPVDEAGEI-KAKERWPIHRPAPELVEQSTEIEILETGIKVIDLLAPFPKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG F G+G+GK+ L+ R+ + S+ VGER RE E ++E L + Sbjct: 149 GKIGFFGGAGVGKTVLVMELIRNIAIEHKGFSVFAGVGERTREGNELWLEMQESGVLGNT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 V+V +E P R LTA+TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 VLVFGQMNEPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + +G+IT+V ++ V D+ DP + + LD + Sbjct: 269 PSAVGYQPTLATDMGELQERI--TSTRRGSITSVQAIYVPADDITDPAPATTFAHLDATV 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R +AE G YP VDPL S S++ D A E ++ + ++ R+++ +DI I G Sbjct: 327 VLSRRIAELGLYPAVDPLDSSSKILDPAIVGREHYEVARGVQEVLQRYKDLQDIIAILGV 386 Query: 396 R---PGVDLILDKAVHQVPIIYDFLKQ 419 P L+ VH+ I FL Q Sbjct: 387 EELSPEDKLV----VHRARRIQRFLSQ 409 >gi|315427343|dbj|BAJ48953.1| V-type H+-transporting ATPase subunit B [Candidatus Caldiarchaeum subterraneum] Length = 454 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 93/282 (32%), Positives = 150/282 (53%), Gaps = 16/282 (5%) Query: 91 GRFRISP-SACWCGRVINALGKPIDG-DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTG 148 GR +P S GRV + LG+PIDG D + + L + P R+ +TG Sbjct: 79 GRTMETPVSTEMLGRVFDGLGRPIDGLPDPIAEDVLDVNGEPINPE--QREYPSDFIQTG 136 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREV 202 I ID L GQ++ +F+G+G+ + L + AR VI + VG + E Sbjct: 137 ISAIDGMNSLVRGQKLPIFSGAGLPHNMLAAQIARQATVPGKEEEFAVIFAAVGVQNDEA 196 Query: 203 REF---IEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDS 258 R F +E+ +K+S + + +D+ I R + P A+T+AEY + K G +VL+I+ Sbjct: 197 RYFRRSLEE--SGAIKRSALFLNLADDPAIERIVTPRIALTLAEYLAFKQGYHVLVIITD 254 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 IT +A ++RE++ E+P +GYP ++++L L ER G + KG++T + + + D Sbjct: 255 ITNYAEALREVSAAREEVPGRKGYPGYMYTDLASLYERAGRIKGLKGSLTQMPILSMPSD 314 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + PI D I +G IVL+R L +G YPP++ L S+SRL Sbjct: 315 DITHPIPDLTGYITEGQIVLSRDLYRKGIYPPINVLMSLSRL 356 >gi|110915616|gb|ABH02596.1| ATP synthase beta subunit [Cynosurus cristatus] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG + + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|159106871|ref|YP_001531290.1| ATP synthase CF1 beta subunit [Lolium perenne] gi|190358678|sp|A8Y9H7|ATPB_LOLPR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|158934405|emb|CAO85983.1| ATP synthase CF1 beta subunit [Lolium perenne] Length = 498 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|119368192|dbj|BAF40439.1| ATP synthase beta subunit [Clusia rosea] Length = 489 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 96 GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 215 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYKE 392 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 393 LQDIIAILG 401 >gi|113910786|gb|ABI48125.1| ATPase beta subunit [Lophozia gillmani] Length = 456 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 67 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 123 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 124 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 183 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 184 INEENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDINKQDVLLFIDNIFRFVQA 243 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 244 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 301 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD V +R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 302 ATTFAHLDATTVSSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 360 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 361 KELQDIIAISG 371 >gi|332105865|gb|AEE01395.1| ATP synthase beta chain [Brachychiton acerifolius] Length = 493 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 99 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 393 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 394 KELQDIIAILG 404 >gi|118430395|ref|YP_874660.1| ATP synthase CF1 beta subunit [Hordeum vulgare subsp. vulgare] gi|126302525|sp|P00828|ATPB_HORVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118201049|gb|ABK79420.1| ATP synthase CF1 beta subunit [Hordeum vulgare subsp. vulgare] Length = 498 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|113910758|gb|ABI48111.1| ATPase beta subunit [Reboulia hemisphaerica] Length = 472 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG +++ + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPVD---NLGPVEVTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|71842251|ref|YP_277339.1| ATP synthase CF1 beta subunit [Emiliania huxleyi] gi|118573534|sp|Q4G3C8|ATPB_EMIHU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|52547728|gb|AAU81899.1| ATP synthase CF1 beta chain [Emiliania huxleyi] gi|60101494|gb|AAX13838.1| ATP synthase CF1 beta subunit [Emiliania huxleyi] Length = 476 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 24/309 (7%) Query: 103 GRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +G + + I P + F+TGI+V+D+ P Sbjct: 91 GRIFNVLGEPVD---EMGPCEATAGLPIHRAAPAFTDLDTKPSVFETGIKVVDLLAPYKR 147 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREF---------IE 207 G +IG+F G+G+GK+ L+ + AR+ V + ER RE + I+ Sbjct: 148 GGKIGLFGGAGVGKTVLIMELINNIARAHGGVSVFGGVG-ERTREGNDLYAEMKESGVID 206 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 + DN K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 207 EKKLDN-SKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 265 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 266 SEVSALLGRMPSAVGYQPTLATEMGVLQERI--TSTTEGSITSIQAVYVPADDLTDPAPA 323 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S L + A+ ++ + R++E Sbjct: 324 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPEIVGAEHYATAQNIKETLQRYKE 383 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 384 LQDIIAILG 392 >gi|325479306|gb|EGC82402.1| ATP synthase ab C terminal domain protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 581 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 83/282 (29%), Positives = 147/282 (52%), Gaps = 18/282 (6%) Query: 131 KVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV 190 K P + +EK F+TG RV+D+F PL G + + G G GK+ L A+ D + Sbjct: 192 KQRPVKSSMPIEKLFETGQRVLDVFFPLAKGGTVAIPGGFGTGKTMLQHQLAQYSDVDII 251 Query: 191 IISLVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIA 242 I GERG E+ + +E++ G L + +++A + P+ + A + T +T+A Sbjct: 252 IYIGCGERGNEMTQVLEEFPDLIDPNTGKGLMERTILIANTSNMPVAAREASIYTGITMA 311 Query: 243 EYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 EYF G +V L+ DS +R+A ++REI+ E+P GYP + S L + ER G + Sbjct: 312 EYFRDMGYDVALMADSSSRWAEALREISGRLEEIPAEEGYPAYLGSRLSQFYERAGYFKN 371 Query: 303 ---EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR 359 +G++T + +V G + ++P+ ++ R ++ + L+R LA YP ++ L+S S Sbjct: 372 LNGSEGSVTLIGAVSPSGGDFSEPVTENTRRCVNVFLGLDRKLAYSRHYPAINWLSSYSN 431 Query: 360 LADKAWSADEKKL-------VSSLTHLIHRFEETRDIRLIGG 394 +K S E++L + L +++ +E R I ++ G Sbjct: 432 YIEKIRSYYEERLGRDIIAIRNKLMNVLLEEDEVRSIMMLVG 473 >gi|110915606|gb|ABH02591.1| ATP synthase beta subunit [Calamagrostis canadensis] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRXAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915676|gb|ABH02626.1| ATP synthase beta subunit [Parapholis incurva] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG + + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEENIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915574|gb|ABH02575.1| ATP synthase beta subunit [Alopecurus magellanicus] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|20467381|gb|AAL27821.1| ATPase beta subunit [Ephedra fragilis] Length = 447 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 74 LGRIFNVLGEPVD---NLGPIDTSTTFPIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 130 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKS-- 217 G +IG+F G+ +GK+ L+ + +S+ G G+ RE + Y+ +K+S Sbjct: 131 RGGKIGLFGGAXVGKTVLIMELINNIAKAHGGVSVFGGVGKRTREGNDLYM--EMKESGV 188 Query: 218 -----------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 189 INEKNIIESKVALVYGQMNEPPGARMKVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 248 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 249 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 306 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S L + ++ + + R++ Sbjct: 307 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYK 366 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 367 ELQDIIAILG 376 >gi|28188329|gb|AAL92544.1| ATP synthase beta subunit [Coleochaete sp. 327d3] Length = 399 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + + + + PA + + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---ELGPVDSTTTLPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W + + + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|110915646|gb|ABH02611.1| ATP synthase beta subunit [Gaudinia hispanica] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915686|gb|ABH02631.1| ATP synthase beta subunit [Podagrostis thurberiana] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVAJVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915680|gb|ABH02628.1| ATP synthase beta subunit [Poa alpina] Length = 471 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 78 ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 134 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 194 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 195 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 254 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 255 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLXDPAP 312 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 313 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRYK 372 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 373 ELQDIIAILG 382 >gi|155029295|dbj|BAF75528.1| ATP synthase beta subunit [Argomuellera macrophylla] Length = 480 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/317 (31%), Positives = 158/317 (49%), Gaps = 20/317 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIR 150 R+ GR+ N LG+P+D LG D + I P + F+TGI+ Sbjct: 81 LRVPVGGATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIK 137 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 138 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 197 Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+ Sbjct: 198 EMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 257 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D Sbjct: 258 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPAD 315 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377 + DP + + LD VL+R LA +G YP VDPL S S + +E + + Sbjct: 316 DLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVK 375 Query: 378 HLIHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 376 QTLQRYKELQDIIAILG 392 >gi|119350481|gb|ABL63191.1| AtpB [Closteriopsis acicularis] Length = 392 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + + I P ++ F+TGI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDDLGPVNNKE-QLPIHRSAPAFVDLDTKLAIFETGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ DN Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESRVIDEDN 157 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 158 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 217 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 218 ALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + D+ + ++ + R++E +DI Sbjct: 276 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGDQHYQCAQNVKQTLQRYKELQDI 335 Query: 390 RLIGG 394 I G Sbjct: 336 IAILG 340 >gi|119368020|dbj|BAF40513.1| ATP synthase beta subunit [Oldfieldia dactylophylla] Length = 489 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + K +TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIELDTKLKILETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYLG-- 211 P G +IG+F G+G+GK+ L+ + + + VGER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKNHGGVSVFGGVGERTREGNDLYKEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L +D + + + R+ Sbjct: 331 PATTFAHLDATTVLSRKLAAKGIYPAVDPLDSTSTMLQPNIVGSDHYETAQKVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|7708648|emb|CAB89998.1| ATP synthase beta subunit [Solanum americanum subsp. nodiflorum] Length = 479 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 93 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 149 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 210 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 388 KELQDIIAILG 398 >gi|20384961|gb|AAM19147.1| ATP synthase beta subunit [Coleochaete sp. 18a1] Length = 402 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---QLGPVDSTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W + + + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|6017806|gb|AAF01637.1| ATP synthase beta subunit [Itea ilicifolia] Length = 494 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 100 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 156 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 157 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 216 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 217 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 276 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 277 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 334 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 335 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 394 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 395 KELQDIIAILG 405 >gi|50401827|sp|P62614|ATPB_AEGCR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|50401828|sp|P62626|ATPB_AEGCO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|343981|dbj|BAA01870.1| ATP synthase beta subunit [Aegilops columnaris] gi|343984|dbj|BAA01872.1| ATP synthase beta subunit [Aegilops crassa] Length = 498 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|110915596|gb|ABH02586.1| ATP synthase beta subunit [Brachypodium pinnatum] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMRESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915634|gb|ABH02605.1| ATP synthase beta subunit [Elymus trachycaulus] gi|110915662|gb|ABH02619.1| ATP synthase beta subunit [Littledalea tibetica] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|113910764|gb|ABI48114.1| ATPase beta subunit [Dumortiera hirsuta] Length = 469 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 161/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG +++ + + PA + + F+TGI+V+D+ P Sbjct: 80 ATLGRIFNVLGEPVD---NLGPVEVTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 136 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 137 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 196 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 197 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 256 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 257 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 314 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 315 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 373 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 374 KELQDIIAILG 384 >gi|113910926|gb|ABI48195.1| ATPase beta subunit [Anemia phyllitidis] Length = 419 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 63 LGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 119 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L++ A++ V + ER RE + + + Sbjct: 120 RGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVI 178 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 179 NEQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAG 238 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 239 SEVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPA 296 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 297 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 355 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 356 ELQDIIAILG 365 >gi|7708315|emb|CAB90086.1| ATP synthase beta subunit [Globularia salicina] Length = 492 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|19033071|gb|AAL83520.1|AF408792_1 ATP synthase beta subunit [Chaetosphaeridium globosum] Length = 399 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 32/314 (10%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D G ++ + S + PA + + F+TGI+V+D+ P Sbjct: 37 LGRIFNVLGEPVDN-----MGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 91 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 92 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 150 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E+ LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 151 VINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 208 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 209 VQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTD 266 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380 P + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 267 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTL 325 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 326 QRYKELQDIIAILG 339 >gi|153012228|ref|YP_001381743.1| ATP synthase CF1 beta subunit [Medicago truncatula] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 108/368 (29%), Positives = 177/368 (48%), Gaps = 27/368 (7%) Query: 49 VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99 ++ QG+ D +GQ I + ++ V + + + G +V + G + Sbjct: 47 LIVQGR--DTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMVVINTGAPLSVPVGG 104 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+PID + G S I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 163 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 164 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIN 223 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 224 EKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 283 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 284 EVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 341 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 342 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKEL 401 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 402 QDIIAILG 409 >gi|149071996|ref|YP_001293559.1| ATP synthase subunit B [Rhodomonas salina] gi|190358718|sp|A6MVY0|ATPB_RHDSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|134302947|gb|ABO70751.1| ATP synthase subunit B [Rhodomonas salina] Length = 471 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 156/312 (50%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI---MSKVPPAMNRQRVEKG-FKTGIRVIDIF 155 GR+ N LG P+D G++SME + ++ P + F+TGI+V+D+ Sbjct: 84 STLGRIFNVLGVPVDE-----MGEVSMETTLPIHRLSPRFTELETKPSIFETGIKVVDLL 138 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL----- 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 139 APYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKES 198 Query: 211 ----GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 GVINASNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLATEMGTLQERI--TSTREGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD-KAWSADEKKLVSSLTHLIHR 382 + S LD VL+R+LA +G YP VDPL S S + ++ + + R Sbjct: 317 APATTFSHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQINIVGSEHYDTAQDVKETLQR 376 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 377 YKELQDIIAILG 388 >gi|21684919|emb|CAD11586.1| ATP synthase beta subunit [Thurnia sphaerocephala] Length = 409 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 153/310 (49%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 17 ATLGRIFNVLGEPVD---NLGAVDSSXTSPIHRSAPAFIQLDTTLSIFETGIKVVDLLAP 73 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 74 XRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGV 133 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 134 INEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 193 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G P A GY ++ +E+ L ERI + +KG IT++ +V V D+ DP Sbjct: 194 GSEVSALLGRXPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAP 251 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 252 ATTFAHLDATTVLSRPLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQRYK 311 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 312 ELQDIIAILG 321 >gi|270313031|gb|ACZ73597.1| ATP synthase beta subunit [Cneorum tricoccon] Length = 498 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|296120449|ref|YP_003628227.1| ATP synthase F1 subunit beta [Planctomyces limnophilus DSM 3776] gi|296012789|gb|ADG66028.1| ATP synthase F1, beta subunit [Planctomyces limnophilus DSM 3776] Length = 481 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 104/309 (33%), Positives = 168/309 (54%), Gaps = 24/309 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME---IMSKVPPAM-NRQRVEKGFKTGIRVIDIFTPL 158 GRV N LG+PIDG +G+++ E + + PP + + + F+TGI+V+D+ P Sbjct: 96 GRVFNVLGEPIDG-----RGEVAAEDHWPIHRDPPKLEDLSSKTEIFETGIKVVDLLIPF 150 Query: 159 CHGQRIGVFAGSGIGKSTLLS-MFAR--SDCFDKVIISLVGERGREVR----EFIEDYLG 211 G + G+F G+G+GK+ +L + AR S + + VGER RE E E +G Sbjct: 151 VRGGKAGLFGGAGLGKTVILQELIARIASTHGGYSVFAGVGERTREGNDLWLEMQETQIG 210 Query: 212 DN----LKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSI 266 ++++ +V +E P R L+A+T+AE+F + G + LL +D+I RF+ + Sbjct: 211 STGRAVIEQTCMVFGQMNEPPGARLRVALSALTMAEWFRDTTGADTLLFVDNIFRFSQAG 270 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +EL L ERI + ++G IT+V +V V D+ DP Sbjct: 271 SEVSALLGRMPSAVGYQPTLSTELGALQERI--TSTKRGAITSVQAVYVPADDPTDPAPA 328 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEE 385 + S LD I L R +AE+G YP +DPLAS SR+ D + + + ++ R+ E Sbjct: 329 TAFSHLDAFIYLERKIAEKGLYPAIDPLASSSRILDPQIVGERHYACARRVQKILQRYRE 388 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 389 LQDIIAILG 397 >gi|184127837|gb|ACC67818.1| ATP synthase beta chain [Danaea elliptica] Length = 399 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D G D+ ++ + K PA + + F+TGI+V+D+ P Sbjct: 12 LGRIFNVLGEPVDNS---GPVDVDTISPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 69 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 128 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 129 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 188 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 189 EVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 246 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 247 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 305 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 306 LQDIIAILG 314 >gi|125716971|ref|YP_001034104.1| V-type ATP synthase subunit B [Streptococcus sanguinis SK36] gi|167016639|sp|A3CK49|VATB_STRSV RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|125496888|gb|ABN43554.1| V-type sodium ATPase, subunit B, putative [Streptococcus sanguinis SK36] Length = 464 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 96/325 (29%), Positives = 160/325 (49%), Gaps = 13/325 (4%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 +H G S GQV+ + D +V + G + + F + S GR+ N Sbjct: 36 LHDG--SKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFN 93 Query: 108 ALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 +GKPIDG ++ + ++I + + R ++ +TGI ID L GQ++ VF Sbjct: 94 GMGKPIDGGPAI-LPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVF 152 Query: 168 AGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVV 220 +GSG+ L + AR SD V+ +G E F+ D + +SV+ Sbjct: 153 SGSGLPHKELAAQIARQATVLNSDENFAVVFVAMGITFEEAEFFMNDLRETGAIDRSVLF 212 Query: 221 VATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVA 279 + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P Sbjct: 213 INLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGR 272 Query: 280 RGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLN 339 RGYP +++ L L ER G +KG++T + + + D+ PI D I +G I+L+ Sbjct: 273 RGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGYITEGQIILS 332 Query: 340 RSLAEEGRYPPVDPLASVSRLADKA 364 R L G PP++ L S+SRL DK Sbjct: 333 RELYNSGYRPPINVLPSLSRLKDKG 357 >gi|6686914|emb|CAB64775.1| ATP synthase beta subunit [Boopis graminea] Length = 498 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|320454991|dbj|BAJ65641.1| ATP synthase beta subunit [Metzgeria decipiens] gi|320454997|dbj|BAJ65645.1| ATP synthase beta subunit [Metzgeria temperata] Length = 492 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + G + I P F+TGI+V+D+ P Sbjct: 103 ATLGRIFNVLGEPVDNLGPVNAGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 222 EKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 281 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|305671631|gb|ADM63125.1| ATP synthase beta subunit [Lonicera japonica] gi|305671699|gb|ADM63159.1| ATP synthase beta subunit [Leycesteria formosa] Length = 489 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 271 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 329 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + + + + R Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGKNHYETAQRVKQTLQR 389 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 390 YKELQDIIAILG 401 >gi|110915600|gb|ABH02588.1| ATP synthase beta subunit [Bromus inermis] gi|110915602|gb|ABH02589.1| ATP synthase beta subunit [Bromus suksdorfii] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|19033081|gb|AAL83525.1|AF408797_1 ATP synthase beta subunit [Spirogyra maxima] Length = 402 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 156/309 (50%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D EI P F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---NLGPVDAVTKFEIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W + + + + R++E Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGPEHYETAQGVKQTLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|212896604|gb|ACJ38505.1| membrane-bound ATP synthase subunit B [Teramnus uncinatus] Length = 467 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + E ++ G V G + GR Sbjct: 33 KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 92 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P + F+TGI+V+D+ P G Sbjct: 93 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 149 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 150 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 209 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 210 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 269 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 270 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 327 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 328 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 387 Query: 390 RLIGG 394 I G Sbjct: 388 IAILG 392 >gi|159227588|emb|CAJ80585.1| ATP synthase beta subunit [Physalis aequata] Length = 343 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 20/305 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 42 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 98 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 99 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 158 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 159 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 218 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 219 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 276 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 277 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 336 Query: 385 ETRDI 389 E +DI Sbjct: 337 ELQDI 341 >gi|118430309|ref|YP_874743.1| ATP synthase CF1 beta subunit [Agrostis stolonifera] gi|125987717|sp|A1EA15|ATPB_AGRST RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|118201218|gb|ABK79587.1| ATP synthase CF1 beta subunit [Agrostis stolonifera] Length = 498 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|19033095|gb|AAL83532.1|AF408804_1 ATP synthase beta subunit [Entransia fimbriata] gi|61196974|gb|AAX39472.1| ATP synthase beta subunit [Entransia fimbriata] Length = 402 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG L+ I P + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---NLGPVNNSLTAPIHRNSPAFIQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKK--LVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYDIAQGVKETLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|21684913|emb|CAD11583.1| ATP synthase beta subunit [Elegia asperiflora] Length = 491 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P ++ F+TGI+V+D+ P Sbjct: 99 ATLGRIFNVLGEPVD---NLGPVDTSATSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 155 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 215 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 216 INEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRFVQA 275 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +K +IT++ +V V D+ DP Sbjct: 276 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTDPAP 333 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 334 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQRVKQTLQRYK 393 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 394 ELQDIIAILG 403 >gi|169260963|gb|ACA52083.1| ATP synthase beta subunit [Sphagnum sp. Lafarge Swamp 28-07-02] Length = 413 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + PA + + F+TGI+V+D+ P Sbjct: 35 ATLGRIFNVLGEPVD---NLGPVDAGTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 91 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 92 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 151 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 152 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 211 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 212 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 269 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 270 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 328 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 329 KELQDIIAILG 339 >gi|110915644|gb|ABH02610.1| ATP synthase beta subunit [Gaudinia fragilis] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915570|gb|ABH02573.1| ATP synthase beta subunit [Aira caryophyllea] Length = 499 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 105 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 161 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 221 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 222 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 281 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 282 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIASTKK--GSITSIQAVYVPADDLTDPA 339 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 340 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 399 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 400 KELQDIIAILG 410 >gi|61968287|gb|AAX57070.1| ATP synthase beta subunit [Phyllanthus cf. decipiens Hoffmann et al. 162] Length = 479 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPVD---ELGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 387 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 388 ELQDIIAILG 397 >gi|22094585|gb|AAM91922.1|AF525277_1 ATPase beta subunit [Populus tomentosa] Length = 498 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 104 GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 223 NEENIAESKVALVYGQMNEPPGARMSVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|50346789|ref|YP_053162.1| ATP synthase CF1 beta subunit [Nymphaea alba] gi|75323455|sp|Q6EW72|ATPB_NYMAL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|50250334|emb|CAF28600.1| ATPase beta subunit [Nymphaea alba] Length = 498 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRAAPAFTQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|320455016|dbj|BAJ65655.1| ATP synthase beta subunit [Metzgeria nudifrons] Length = 492 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/307 (31%), Positives = 154/307 (50%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + G + I P F+TGI+V+D+ P G Sbjct: 105 LGRIFNVLGEPVDNLGPVNAGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 163 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 164 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEK 223 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 224 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGSEV 283 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 284 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 341 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E + Sbjct: 342 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 400 Query: 388 DIRLIGG 394 DI I G Sbjct: 401 DIIAILG 407 >gi|227553301|ref|ZP_03983350.1| V family ATP synthase subunit B [Enterococcus faecalis HH22] gi|227177556|gb|EEI58528.1| V family ATP synthase subunit B [Enterococcus faecalis HH22] Length = 442 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 21/320 (6%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ IN D + I++ D + H +SP GRV + LG+ D Sbjct: 26 GQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPD--MMGRVFDGLGRLKDN 83 Query: 116 DDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 L K D++ E+++ V R ++ +TGI ID L GQ++ VF+ SG+ Sbjct: 84 GPELLPEKKLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGL 139 Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 L + AR S+ V+ + +G E F+ED+ + +SV+ + ++ Sbjct: 140 PHKELAAQIARQANVLNSEEEFAVVFAAIGITFEEAEYFMEDFRQTGAIDRSVLFMNLAN 199 Query: 226 ESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 + I R P A+T AEY + KG +VL+I+ +T + ++REI+ E+P RGYP Sbjct: 200 DPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPG 259 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 +++ L L ER G KG++T + + + ++ PI D I +G I+L+R L + Sbjct: 260 YLYTNLATLYERAGRIRGSKGSVTQIPILTMPEEDKTHPIPDLTGYITEGQIILSRELYK 319 Query: 345 EGRYPPVDPLASVSRLADKA 364 G PP+D L S+SRL DK Sbjct: 320 SGIQPPIDVLPSLSRLKDKG 339 >gi|212896598|gb|ACJ38502.1| membrane-bound ATP synthase subunit B [Bituminaria bituminosa] Length = 467 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + E ++ G V G + GR Sbjct: 31 KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 90 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P + F+TGI+V+D+ P G Sbjct: 91 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 147 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 148 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 207 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 208 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 267 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 268 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 325 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 326 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 385 Query: 390 RLIGG 394 I G Sbjct: 386 IAILG 390 >gi|110915694|gb|ABH02635.1| ATP synthase beta subunit [Festuca arundinacea] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIAXTKK--GSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|21633433|gb|AAM52191.1| ATP synthase beta subunit [Erycibe glomerata] Length = 490 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LGKP+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGKPVD---NLGPVDTNTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|52788823|gb|AAU87384.1| ATP synthase beta chain [Anemia phyllitidis] Length = 383 Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L++ A++ V + ER RE + + + Sbjct: 64 RGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVI 122 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 123 NEQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAG 182 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 183 SEVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPA 240 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 241 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 299 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 300 ELQDIIAILG 309 >gi|329955021|ref|ZP_08296002.1| ATP synthase F1, beta subunit [Bacteroides clarus YIT 12056] gi|328526311|gb|EGF53326.1| ATP synthase F1, beta subunit [Bacteroides clarus YIT 12056] Length = 506 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 45/327 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + + I + P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKELDRAG-AYPIHREPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ KK + ++ +E P R+ L+ +T+AE F G Sbjct: 210 GEEFKKGMEEGHWDLSKVDYNEVAKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDMG 269 Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 270 SETNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389 E ++ + ++ R +E +DI Sbjct: 388 HIVGQEHYEVAQRVKQILQRNKELQDI 414 >gi|222099822|ref|YP_002534390.1| ATP synthase subunit beta [Thermotoga neapolitana DSM 4359] gi|254808171|sp|B9K7U1|ATPB_THENN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|221572212|gb|ACM23024.1| ATP synthase subunit beta [Thermotoga neapolitana DSM 4359] Length = 468 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 108/327 (33%), Positives = 172/327 (52%), Gaps = 16/327 (4%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D + K I P + + + +TGI+VID+ P G Sbjct: 90 LGRILNVIGEPVDEAGEI-KSKERWPIHRPAPELIEQSTEIEILETGIKVIDLLAPFPKG 148 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVRE-FIEDYLGDNLKKS 217 +IG F G+G+GK+ L+ R+ + S+ VGER RE E ++E L + Sbjct: 149 GKIGFFGGAGVGKTVLVMELIRNIAIEHKGFSVFAGVGERTREGNELWLEMQESGVLGNT 208 Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIATNSGEL 276 V+V +E P R LTA+TIAEYF +G +VLL +D+I RF + E++ G + Sbjct: 209 VLVFGQMNEPPGARFRVALTALTIAEYFRDVEGRDVLLFIDNIFRFVQAGSEVSALLGRM 268 Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336 P A GY ++ +++ L ERI + +G+IT+V ++ V D+ DP + + LD + Sbjct: 269 PSAVGYQPTLATDMGELQERI--TSTRRGSITSVQAIYVPADDITDPAPATTFAHLDATV 326 Query: 337 VLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDIRLIGGY 395 VL+R +AE G YP VDPL S S++ D A E ++ + ++ R+++ +DI I G Sbjct: 327 VLSRRIAELGLYPAVDPLDSSSKILDPAVVGREHYEVARGVQEVLQRYKDLQDIIAILGV 386 Query: 396 R---PGVDLILDKAVHQVPIIYDFLKQ 419 P L+ VH+ I FL Q Sbjct: 387 EELSPEDKLV----VHRARRIQRFLSQ 409 >gi|154001280|gb|ABS57115.1| ATP synthase beta subunit [Agathis robusta] Length = 424 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D D I P F+TGI+V+D+ P Sbjct: 34 GATLGRIFNVLGEPVD-DLGPVAARAKSPIHRAAPDFTQLDTKFSIFETGIKVVDLLAPY 92 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ + V + S VGER RE + + + Sbjct: 93 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVI 152 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 153 QEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 212 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 213 SEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 270 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + + +E + + + R++E Sbjct: 271 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQGVKQTLQRYKE 330 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 331 LQDIIAILG 339 >gi|37543301|gb|AAL92715.1| ATP synthase beta subunit [Chaetosphaeridium sp. 314c2] Length = 402 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 32/314 (10%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D G ++ + S + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVDN-----MGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 153 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E+ LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 154 VINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 211 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 212 VQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTD 269 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380 P + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 270 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTL 328 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 329 QRYKELQDIIAILG 342 >gi|78102542|ref|YP_358683.1| ATP synthase CF1 beta subunit [Nicotiana sylvestris] gi|81238327|ref|NP_054506.2| ATP synthase CF1 beta subunit [Nicotiana tabacum] gi|118573704|sp|Q3C1J5|ATPB_NICSY RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|254777|gb|AAB23131.1| proton-adenosine triphosphatase beta subunit, proton-ATPase beta subunit, coupling factor-1 beta, CF1-beta [Nicotiana tabacum, var. Xanthi, tentoxin-resistant, Peptide Chloroplast, 498 aa] gi|76559641|emb|CAA77360.2| ATPase beta subunit [Nicotiana tabacum] gi|77799569|dbj|BAE46658.1| ATPase beta subunit [Nicotiana sylvestris] Length = 498 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 111/370 (30%), Positives = 180/370 (48%), Gaps = 31/370 (8%) Query: 49 VVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSA 99 +V QG+ D++GQ I + ++ V + E ++ G V G + Sbjct: 47 LVVQGR--DSVGQPINVACEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPISVPVGG 104 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|110915668|gb|ABH02622.1| ATP synthase beta subunit [Mibora minima] Length = 472 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 195 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|153811165|ref|ZP_01963833.1| hypothetical protein RUMOBE_01556 [Ruminococcus obeum ATCC 29174] gi|149832663|gb|EDM87747.1| hypothetical protein RUMOBE_01556 [Ruminococcus obeum ATCC 29174] Length = 460 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 94/323 (29%), Positives = 158/323 (48%), Gaps = 16/323 (4%) Query: 51 HQGKNSDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVI 106 H + +G++I I D I + +SLG+ L H +SP GR Sbjct: 33 HMDDGTQKIGRIIEIYEDKAVIQVFEGTDNMSLGNTHTRLTGHPMEIGLSPE--ILGRTF 90 Query: 107 NALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 N +G+PIDG ++ ++++ I + R+ TGI ID T L GQ++ + Sbjct: 91 NGIGQPIDGLGAITP-EVNLNINGLPLNPVTREYPRNYINTGISAIDGLTTLIRGQKLPI 149 Query: 167 FAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVV 219 F+G+G+ L + + SD ++ + +G + F + VV Sbjct: 150 FSGNGLPHDKLAAQIVQQASLGGDSDENFAIVFAAMGVKYDVAEFFRRTFEESGASDHVV 209 Query: 220 VVATSDESPIL-RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELP 277 + P++ R + P A+T AEY + KG ++L+IL IT F ++RE++++ GE+P Sbjct: 210 MFLNLANDPVVERLLTPKIALTAAEYLAFEKGMHILVILTDITSFCEAMREVSSSKGEIP 269 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 +GYP ++SEL L ER G + G++T + + + D+ PI D I +G IV Sbjct: 270 SRKGYPGYLYSELATLYERAGIVQGGTGSVTQIPILTMPNDDITHPIPDLTGYITEGQIV 329 Query: 338 LNRSLAEEGRYPPVDPLASVSRL 360 L+R L + YPP++ L S+SRL Sbjct: 330 LDRQLHGQAIYPPINVLPSLSRL 352 >gi|119350559|gb|ABL63230.1| AtpB [Asterochloris magna] Length = 391 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 154/305 (50%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + D S I P ++ F++GI+V+D+ P G Sbjct: 39 GRIFNVLGEPVDNLGPVDNKD-SFPIHRSAPAFVDLDTKLSIFESGIKVVDLLAPYRRGG 97 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------GDN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 98 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIDSSN 157 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E++ Sbjct: 158 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 217 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + + Sbjct: 218 ALLGRMPSAVGYQPTLATEMGCLQERI--TSTKDGSITSIQAVYVPADDLTDPAPATTFA 275 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R+LA +G YP VDPL S S + DE ++ + R++E +DI Sbjct: 276 HLDATTVLSRALASKGIYPAVDPLDSTSTMLQPWIVGDEHYDCAQNVKQTLQRYKELQDI 335 Query: 390 RLIGG 394 I G Sbjct: 336 IAILG 340 >gi|37543307|gb|AAL92718.1| ATP synthase beta subunit [Chaetosphaeridium sp. 7c2] gi|37543309|gb|AAL92719.1| ATP synthase beta subunit [Chaetosphaeridium sp. 539a3] Length = 402 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 32/314 (10%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D G ++ + S + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVDN-----MGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 153 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E+ LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 154 VINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 211 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 212 VQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTD 269 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380 P + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 270 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTL 328 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 329 QRYKELQDIIAILG 342 >gi|15425576|emb|CAC60327.1| ATP synthase beta subunit [Escallonia rubra] Length = 462 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 69 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 125 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 126 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 184 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E +G++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 185 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 242 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 243 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 300 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 301 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 360 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 361 QRYKELQDIIAILG 374 >gi|75339191|sp|Q4PLI6|ATPB_BETVU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|67527182|gb|AAY68361.1| ATP synthase beta subunit [Beta vulgaris] Length = 498 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNILRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|21633427|gb|AAM52188.1| ATP synthase beta subunit [Maripa repens] Length = 487 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LGKP+D +LG D + I P + F+TGI+V+D+ Sbjct: 99 GVTLGRIFNVLGKPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVYEQDVLLFIDNIFRFVQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + S + + + + R+ Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVSEEHYETAQRVKQTLQRY 393 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 394 KELQDIIAILG 404 >gi|21633437|gb|AAM52193.1| ATP synthase beta subunit [Poranopsis paniculata] Length = 490 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LGKP+D LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGKPVD---HLGPVDTNTTSHIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 217 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E+ + ++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 218 GVINEETIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 275 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 276 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 333 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 334 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 393 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 394 QRYKELQDIIAILG 407 >gi|7708300|emb|CAB90077.1| ATP synthase beta subunit [Escallonia sp. 'Chase 2499 K'] Length = 470 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 84 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 199 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E +G++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 200 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 257 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 258 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 315 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 316 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 375 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 376 QRYKELQDIIAILG 389 >gi|257852976|gb|ACV71499.1| ATP synthase beta subunit [Tricliceras longipedunculatum] Length = 377 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 91/263 (34%), Positives = 141/263 (53%), Gaps = 15/263 (5%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGRE 201 F+TGI+V+D+ P G +IG+F G+G+GK+ L+ + + V + + VGER RE Sbjct: 29 FETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAYGGVSVFAGVGERTRE 88 Query: 202 ----VREFIEDYL--GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNV 252 RE E + +NL +S V V +E P R LTA+TIAEYF +V Sbjct: 89 GNDLYREMKESGVINQENLTESKVALVYGQMNEPPGARMRVALTALTIAEYFRDINKQSV 148 Query: 253 LLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVIS 312 LL +D+I RF + E++ G +P A GY ++ +E+ L ERI + + G+IT++ + Sbjct: 149 LLFIDNIFRFVQAGSEVSALLGRIPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQA 206 Query: 313 VLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-K 371 V V D+ DP + + LD VL+R LA +G YP VDPL S S + + + + Sbjct: 207 VYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLESTSTMLQRQVVGETHYE 266 Query: 372 LVSSLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 267 TAQRVKQTLQRYKELQDIIAIMG 289 >gi|149384375|gb|ABR25010.1| ATP synthase beta chain [Anemia rotundifolia] Length = 426 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 159/310 (51%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 39 LGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95 Query: 160 HGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L++ A++ V + ER RE + + + Sbjct: 96 RGGKIGLFGGAGVGKTVPITELINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVI 154 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 155 NEQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAG 214 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 SEVSASLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPA 272 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 273 TTSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 331 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 332 ELQDIIAILG 341 >gi|150005509|ref|YP_001300253.1| F0F1 ATP synthase subunit beta [Bacteroides vulgatus ATCC 8482] gi|212695016|ref|ZP_03303144.1| hypothetical protein BACDOR_04554 [Bacteroides dorei DSM 17855] gi|237710548|ref|ZP_04541029.1| F0F1 ATP synthase subunit beta [Bacteroides sp. 9_1_42FAA] gi|237727044|ref|ZP_04557525.1| F0F1 ATP synthase subunit beta [Bacteroides sp. D4] gi|254884058|ref|ZP_05256768.1| ATP synthase F1 sector subunit beta [Bacteroides sp. 4_3_47FAA] gi|265750324|ref|ZP_06086387.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_33FAA] gi|294778711|ref|ZP_06744130.1| ATP synthase F1, beta subunit [Bacteroides vulgatus PC510] gi|319640732|ref|ZP_07995445.1| ATP synthase subunit beta [Bacteroides sp. 3_1_40A] gi|166201692|sp|A6L4L7|ATPB_BACV8 RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|149933933|gb|ABR40631.1| ATP synthase beta chain [Bacteroides vulgatus ATCC 8482] gi|212662332|gb|EEB22906.1| hypothetical protein BACDOR_04554 [Bacteroides dorei DSM 17855] gi|229433900|gb|EEO43977.1| F0F1 ATP synthase subunit beta [Bacteroides dorei 5_1_36/D4] gi|229455270|gb|EEO60991.1| F0F1 ATP synthase subunit beta [Bacteroides sp. 9_1_42FAA] gi|254836851|gb|EET17160.1| ATP synthase F1 sector subunit beta [Bacteroides sp. 4_3_47FAA] gi|263237220|gb|EEZ22670.1| ATP synthase F1, beta subunit [Bacteroides sp. 3_1_33FAA] gi|294447367|gb|EFG15948.1| ATP synthase F1, beta subunit [Bacteroides vulgatus PC510] gi|317387544|gb|EFV68410.1| ATP synthase subunit beta [Bacteroides sp. 3_1_40A] Length = 511 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/328 (30%), Positives = 165/328 (50%), Gaps = 46/328 (14%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+ +DG L K + + I + P V++ TGI+VID+ P G Sbjct: 95 GRLMNVVGEAVDGMRPLSK-EGAFPIHREPPKFDELSTVQEVLFTGIKVIDLLEPYSKGG 153 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 154 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 211 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSK- 248 G+ KKS+ +V +E P R L+ +T+AE F + Sbjct: 212 GEEFKKSMEEGHWDLSKVDYNEVEKSQATLVYGQMNEPPGARSSIALSGLTVAESFRDRK 271 Query: 249 -GD-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK 302 GD ++L +D+I RF + E++ G +P A GY ++ +E+ ++ ERI + Sbjct: 272 NGDSNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQMQERI--TST 329 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 + G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 330 KNGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILD 389 Query: 363 KAWSADEKKLVSS-LTHLIHRFEETRDI 389 E V+ + ++ R +E +DI Sbjct: 390 PLIVGQEHYDVAQRVKQILQRNKELQDI 417 >gi|37720965|gb|AAN32485.1| ATP synthase beta subunit [Palisota bogneri] Length = 484 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D ++ I P + + K F+TGI+V+D+ Sbjct: 91 GATLGRIFNVLGEPVD---DLGPVDTRITSPIHRSAPAFIQLETKLKIFETGIKVVDLLA 147 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 207 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 208 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 267 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 268 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKGGSITSIQAVYVPADDLTDPA 325 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + A + + R+ Sbjct: 326 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGAKHYETAQRVKQTSQRY 385 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 386 KELQDIIAILG 396 >gi|12004117|gb|AAG43898.1|AF213767_1 ATP synthase beta subunit [Primula meadia] Length = 404 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG P+D +LG D S I P + F+TGI+V+D+ Sbjct: 21 GATLGRIFNVLGDPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 77 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 78 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 137 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 138 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 197 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 198 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 255 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 256 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIGGEEHYETAQRVKETLQRY 315 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 316 KELQDIIAILG 326 >gi|7708147|emb|CAB89956.1| ATP synthase beta subunit [Androsace spinulifera] Length = 478 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 20/317 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIR 150 R+ GR+ N LG+P+D +LG D + I P + F+TGI+ Sbjct: 84 LRVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIK 140 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 141 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 200 Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+ Sbjct: 201 EMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 260 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D Sbjct: 261 IFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPAD 318 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377 + DP + + LD VL+R LA +G YP VDPL S S + +E + + Sbjct: 319 DLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVK 378 Query: 378 HLIHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 379 ETLQRYKELQDIIAILG 395 >gi|60391817|sp|P69369|ATPB_NICBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|60391818|sp|P69370|ATPB_NICPL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|11746|emb|CAA43609.1| ATPase subunit beta [Nicotiana quadrivalvis var. bigelovii] gi|11757|emb|CAA43613.1| ATPase subunit beta [Nicotiana plumbaginifolia] Length = 498 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|290490152|gb|ADD31483.1| ATP synthase CF1 beta subunit protein [Lonicera japonica] Length = 498 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 220 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + + + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGKNHYETAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|194033156|ref|YP_002000494.1| ATP synthase CF1 beta subunit [Brachypodium distachyon] gi|193075564|gb|ACF08647.1| ATPase beta subunit [Brachypodium distachyon] Length = 498 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMRESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|111283712|gb|ABH09206.1| ATPase beta subunit [Balantiopsis diplophylla] Length = 426 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 101/317 (31%), Positives = 162/317 (51%), Gaps = 26/317 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 48 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLSAP 104 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 105 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 164 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 165 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 224 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 225 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 282 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDP S S + + W E+ + + + R+ Sbjct: 283 ATTFAHLDATTVLSRGLAAKGIYPAVDPSDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 341 Query: 384 EETRDIRLIGGYRPGVD 400 +E +DI I PG+D Sbjct: 342 KELQDIIAI----PGLD 354 >gi|15425586|emb|CAC60320.1| ATP synthase beta subunit [Moschopsis rosulata] Length = 478 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 107/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLG-DLVFHWGRFRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G D++ + GR Sbjct: 46 KGRDTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMDVIDTGAPLSVPVGGATLGR 105 Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D S I P + F+TGI+V+D+ P G Sbjct: 106 IFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 163 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 222 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 223 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 282 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 283 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 340 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 341 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDI 400 Query: 390 RLIGG 394 I G Sbjct: 401 IAILG 405 >gi|8439470|emb|CAB89934.1| ATP synthase beta subunit [Melianthus major] Length = 484 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 96 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 152 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 213 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 330 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYK 390 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 391 ELQDIIAILG 400 >gi|14718230|gb|AAK72853.1| ATP synthase beta subunit [Spigelia marilandica] Length = 492 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 98 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 156 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 157 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 216 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 217 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 276 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 277 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 334 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 335 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 394 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 395 LQDIIAILG 403 >gi|46360704|gb|AAS89133.1| ATP synthase beta subunit [Petalophyllum ralfsii] Length = 382 Score = 129 bits (325), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 157/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + G S + + PA + + F+TGI+V+D+ P Sbjct: 2 LGRIFNVLGEPVDNLGPVDSGTTSP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 59 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S G G RE + Y+ Sbjct: 60 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSXFGGVGERTREGNDLYMEMKESGVINE 119 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 120 QNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 179 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 180 VSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 237 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 238 FAHLDATXVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 296 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 297 QDIIAILG 304 >gi|305671697|gb|ADM63158.1| ATP synthase beta subunit [Azorella caespitosa] Length = 489 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S+ I P + F+TGI+V+D+ Sbjct: 96 GTTLGRIFNVLGEPVD---NLGPVDTSITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|304440720|ref|ZP_07400604.1| V-type ATP synthase, subunit B [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370907|gb|EFM24529.1| V-type ATP synthase, subunit B [Peptoniphilus duerdenii ATCC BAA-1640] Length = 458 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 96/317 (30%), Positives = 168/317 (52%), Gaps = 15/317 (4%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDL-VFHWGR-FRISPSACWCGRVINALGKPID-GD 116 G+VI +N D + + I+L + V GR + S GR+ + LG+PID G Sbjct: 42 GRVIEVNGDKAMVQIFEGSQGINLPETKVRFLGRPLELGVSPDMIGRIFDGLGQPIDNGP 101 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + K L + S + PA +R + +TGI ID L GQ++ +F+G+G+ + Sbjct: 102 KIIPKMKLDIN-GSAINPA-SRDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGAGLPHNN 159 Query: 177 LLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228 + + AR +D F V+ + +G E + FI+D+ + ++V+ + +D+ Sbjct: 160 VAAQIARQARVLGTNDKF-AVVFAAMGITFEEAQYFIDDFTETGAIDRAVLFMNLADDPA 218 Query: 229 ILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 I R P A+T AEY + + G +VL+I+ +T +A ++RE++ E+P RGYP ++ Sbjct: 219 IERLATPKMALTCAEYLAFEMGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLY 278 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 ++L + ER G + G+IT + + + D+ PI D I +G I+L+R L ++G Sbjct: 279 TDLSTIYERAGRIKGRDGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRDLYKQGI 338 Query: 348 YPPVDPLASVSRLADKA 364 PP++ + S+SRL DK Sbjct: 339 EPPINAIPSLSRLKDKG 355 >gi|113910756|gb|ABI48110.1| ATPase beta subunit [Targionia hypophylla] Length = 456 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D +LG + + + + PA + + F+TG Sbjct: 58 GPLSVPVGEATLGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLAIFETG 114 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208 I+V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + Sbjct: 115 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 174 Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256 Y+ N+ +S V V +E P R LTA+T+AEYF +VLL + Sbjct: 175 YMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFI 234 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 235 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVP 292 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + W E+ + Sbjct: 293 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQ 351 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 352 GVKQTLQRYKELQDIIAILG 371 >gi|99640671|emb|CAJ45111.1| putative beta subunit of chloroplast ATP synthase [Azolla pinnata] Length = 395 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 96/307 (31%), Positives = 155/307 (50%), Gaps = 18/307 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D + + ++ I P F+TGI+V+D+ P G Sbjct: 7 LGRIFNVLGEPVDNMGPV-ESNIKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 65 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ + Sbjct: 66 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVINEE 125 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 NL +S V V +E P R LTA+T+AEYF +VL +D+I RF + E+ Sbjct: 126 NLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGSEV 185 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 186 SALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPATTF 243 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEETR 387 + LD VL+R A +G YP VDPL S S + + W A+ + + + R++E + Sbjct: 244 AHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKQTLQRYKELQ 302 Query: 388 DIRLIGG 394 DI I G Sbjct: 303 DIIAILG 309 >gi|22651734|gb|AAM26939.1| ATP synthase beta subunit [Drosophyllum lusitanicum] Length = 476 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|110227086|ref|YP_665565.1| ATP synthase beta subunit [Populus alba] gi|118573717|sp|Q14FF0|ATPB_POPAL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|109945524|dbj|BAE97212.1| ATP synthase beta subunit [Populus alba] Length = 498 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 104 GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 223 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|33327753|gb|AAQ09240.1| ATP synthase beta subunit [Hydrangea macrophylla] Length = 495 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 221 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R++E Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|14717984|gb|AAK72734.1| ATP synthase beta subunit [Callitriche heterophylla] Length = 483 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|6687199|emb|CAB64877.1| ATP synthase beta subunit [Callitriche heterophylla] Length = 498 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|28188325|gb|AAL92542.1| ATP synthase beta subunit [Coleochaete scutata] Length = 402 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + + + PA + + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---ELGPVDATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W + + + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|281423290|ref|ZP_06254203.1| ATP synthase F1, beta subunit [Prevotella oris F0302] gi|281402626|gb|EFB33457.1| ATP synthase F1, beta subunit [Prevotella oris F0302] Length = 508 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 156/332 (46%), Gaps = 45/332 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N +GKPIDG + L D+ + + P ++ K TGI+VID+ P Sbjct: 95 GRMMNVIGKPIDGMEEL---DMQGAYPIHRAAPTFDQLSTHKEMLATGIKVIDLLEPYMK 151 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + + + VGER RE + + D L Sbjct: 152 GGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLLRDMLESGVIKY 211 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ +K++ +V +E P R L+ +T+AE F G Sbjct: 212 GEAFRKAMEEGKWDLSLVDKKELAESQATLVYGQMNEPPGARASVALSGLTVAEEFRDHG 271 Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + + Sbjct: 272 GKNGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTK 329 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + S LD L+R +AE G YP VDPL S SR+ D Sbjct: 330 NGSITSVQAVYVPADDLTDPAPATTFSHLDATTELSRKIAELGIYPAVDPLGSTSRILDP 389 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + L+ R+ E +DI I G Sbjct: 390 LIVGKAHYDCAQRVKQLLQRYNELQDIIAILG 421 >gi|156573703|gb|ABU85184.1| ATP synthase CF1 beta subunit [Anethum graveolens] Length = 459 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 65 GTTLGRIFNVLGEPVD---NLGSVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 182 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 300 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAKRVKQTLQRY 359 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 360 KELQDIIAILG 370 >gi|110915688|gb|ABH02632.1| ATP synthase beta subunit [Polypogon monspeliensis] Length = 490 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|99640416|emb|CAJ45073.1| putative beta subunit of chloroplast ATP synthase [Alsophila hooglandii] Length = 493 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 163/314 (51%), Gaps = 26/314 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 N+ +S V V +E P R TA+T+AEYF +VLL +D+I RF + E Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399 Query: 387 RDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 400 QDIIAI----PGLD 409 >gi|18075919|emb|CAD11916.1| ATP synthase beta subunit [Forgesia racemosa] Length = 458 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 65 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 180 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E +G++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 181 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 238 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 239 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 296 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 297 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 356 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 357 QRYKELQDIIAILG 370 >gi|28188333|gb|AAL92546.1| ATP synthase beta subunit [Chaetosphaeridium globosum] Length = 402 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/314 (31%), Positives = 162/314 (51%), Gaps = 32/314 (10%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D G ++ + S + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVDN-----MGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 153 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E+ LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 154 VINEENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRF 211 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 212 VQAGSEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTD 269 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLI 380 P + + LD VL+R LA +G YP VDPL S S + + W E+ + + + Sbjct: 270 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTL 328 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 329 QRYKELQDIIAILG 342 >gi|212896638|gb|ACJ38522.1| membrane-bound ATP synthase subunit B [Lespedeza cuneata] Length = 466 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + E ++ G V G + GR Sbjct: 30 KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 89 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P + F+TGI+V+D+ P G Sbjct: 90 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 206 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 207 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 267 ALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 384 Query: 390 RLIGG 394 I G Sbjct: 385 IAILG 389 >gi|189162278|ref|YP_001936524.1| ATP synthase CF1 beta subunit [Fagopyrum esculentum subsp. ancestrale] gi|166065364|gb|ABY79739.1| ATP synthase CF1 beta subunit [Fagopyrum esculentum subsp. ancestrale] Length = 498 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + +E K + + R+ Sbjct: 339 PATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKTAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|160430737|gb|ABX44296.1| ATP synthase subunit beta [Physalis longifolia var. subglabrata] Length = 343 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 97/305 (31%), Positives = 155/305 (50%), Gaps = 20/305 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 40 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 96 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 156 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 157 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 216 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 217 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 274 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 275 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 334 Query: 385 ETRDI 389 E +DI Sbjct: 335 ELQDI 339 >gi|6689002|emb|CAB65349.1| ATP synthase beta subunit [Pentas lanceolata] Length = 498 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTAPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|12004115|gb|AAG43897.1|AF213766_1 ATP synthase beta subunit [Douglasia nivalis] Length = 487 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 20/317 (6%) Query: 93 FRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIR 150 R+ GR+ N LG+P+D +LG D + I P + F+TGI+ Sbjct: 98 LRVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIK 154 Query: 151 VIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL 210 V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 VVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM 214 Query: 211 G---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDS 258 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+ Sbjct: 215 EMKESGVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDN 274 Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318 I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D Sbjct: 275 IFRFXQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPAD 332 Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLT 377 + DP + + LD VL+R LA +G YP VDPL S S + +E + + Sbjct: 333 DLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVK 392 Query: 378 HLIHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 393 ETLQRYKELQDIIAILG 409 >gi|210160947|gb|ACJ09360.1| ATP1 [Phytophthora sojae] Length = 498 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 156/308 (50%), Gaps = 19/308 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G+ +D + + I + P + + TG++V+D+ P G Sbjct: 107 GRIMNVIGESVDERGPINAKRYA-PIHTSAPLLTEQGSGAEILVTGMKVVDLLAPYAKGG 165 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL----- 214 +IG+F G+G+GK+ ++ + + +S+ VGER RE + + + + Sbjct: 166 KIGLFGGAGVGKTVVIMELINNVANNHGGVSVFAGVGERTREGNDLYYEMIESGVIKINE 225 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF + Sbjct: 226 DGTTTGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDVEGQDVLLFVDNIFRFTQACS 285 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP + Sbjct: 286 EVSALLGRIPSAVGYQPTLATDLGALQERI--TSTKKGSITSVQAIYVPADDLTDPAPAT 343 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTH-LIHRFEET 386 S LD VL+R ++E G YP VDPL S SR+ D E V+ T L+ ++ Sbjct: 344 TFSHLDATTVLSRQISELGIYPAVDPLDSKSRMLDPRIIGQEHYDVARATQKLLQDYKGL 403 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 404 QDIIAILG 411 >gi|89242544|gb|ABD64630.1| ATPase beta subunit [Philodendron hederaceum var. oxycardium] Length = 436 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 107/365 (29%), Positives = 176/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I++ ++ V + + ++ G V G + GR Sbjct: 3 KGRDTVGQQIQVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 62 Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D ++ I P + F+TGI+V+D+ P G Sbjct: 63 IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 119 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 120 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 179 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 180 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 239 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 240 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 297 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 298 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKELQDI 357 Query: 390 RLIGG 394 I G Sbjct: 358 IAILG 362 >gi|6689074|emb|CAB65380.1| ATP synthase beta subunit [Roridula gorgonias] Length = 498 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 153/311 (49%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTDRTWPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 220 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLNSTSTMLQPQIVGKEHYETAQKVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|21633389|gb|AAM52169.1| ATP synthase beta subunit [Calycobolus nutans] Length = 487 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D S+ + S I P + F+TGI+V+D+ P Sbjct: 99 GSTLGRIFNVLGEPVDNLGSVDT-NTSSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 157 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 158 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 217 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 218 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 277 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 278 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 335 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 336 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 395 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 396 LQDIIAILG 404 >gi|20467383|gb|AAL27822.1| ATPase beta subunit [Ephedra sp. CR08] Length = 435 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 155/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D S P PA ++ + F+TGI+V+D+ P Sbjct: 82 LGRIFNVLGEPVD---NLGPIDTSTTFXIHRPAPAFSQLDINLAIFETGIKVVDLLAPYR 138 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDC---FDKVIISLVGERGREVREFIEDYLGDNL-- 214 G +IG+F G+G+GK+ L+ + + VGER E + + + Sbjct: 139 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTXEGNDLYMEMKESGVIN 198 Query: 215 ------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIR 267 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 199 EKNIIESKVALVYGQMNEPPXARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGS 258 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP + Sbjct: 259 EVSALLGRMPSAVGYQPTLSTEMGSLQERI--TFTKKGSITSIQAVYVPADDLXDPAPAT 316 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S L + ++ + + R++E Sbjct: 317 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEKHYEIAQEVKQTLQRYKEL 376 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 377 QDIIAILG 384 >gi|14717946|gb|AAK72715.1| ATP synthase beta subunit [Asteropeia micraster] Length = 483 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 97/306 (31%), Positives = 157/306 (51%), Gaps = 20/306 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ Sbjct: 93 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 149 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 387 Query: 384 EETRDI 389 +E +DI Sbjct: 388 KELQDI 393 >gi|55056902|emb|CAF21952.1| ATP synthase beta subunit [Cedrus libani] Length = 462 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 26/318 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---NLGPVDARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 206 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 324 PATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 382 Query: 383 FEETRDIRLIGGYRPGVD 400 ++E +DI I PG+D Sbjct: 383 YKELQDIIAI----PGLD 396 >gi|305671673|gb|ADM63146.1| ATP synthase beta subunit [Pterocephalodes hookeri] Length = 478 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 86 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 142 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 143 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKESG 201 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF + NVLL +D+I RF Sbjct: 202 VINEQNFAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQNVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPEIVGQKHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|212896666|gb|ACJ38536.1| membrane-bound ATP synthase subunit B [Ophrestia radicosa] Length = 461 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 87 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 204 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|195183484|dbj|BAG66957.1| ATP synthase beta subunit [Decorsella paradoxa] Length = 489 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I+ P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---DLGPVDTRTTSPILRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|156530219|gb|ABU75206.1| AtpB [Soulamea sp. JWC-20007] Length = 470 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ KS V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 203 VINEQNISKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 381 KELQDIIAILG 391 >gi|119367966|dbj|BAF40441.1| ATP synthase beta subunit [Montrouziera sphaeroidea] Length = 489 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---DLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110456744|gb|ABG74839.1| ATPase beta subunit [Menodora longiflora] Length = 498 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + + ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGPEHYEIAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|21684925|emb|CAD11589.1| ATP synthase beta subunit [Leersia oryzoides] Length = 497 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 NL++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|66276255|gb|AAY44142.1| ATP synthase beta subunit [Anisophyllea corneri] Length = 486 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 93 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 149 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 210 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 269 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 327 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 388 KELQDIIAILG 398 >gi|320454994|dbj|BAJ65643.1| ATP synthase beta subunit [Metzgeria furcata] Length = 492 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 103 ATLGRIFNVLGEPVD---NLGPVNASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 159 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 160 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 219 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 220 INEKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 279 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 337 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 338 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|299140470|ref|ZP_07033608.1| ATP synthase F1, beta subunit [Prevotella oris C735] gi|298577436|gb|EFI49304.1| ATP synthase F1, beta subunit [Prevotella oris C735] Length = 508 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/332 (29%), Positives = 156/332 (46%), Gaps = 45/332 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N +GKPIDG + L D+ + + P ++ K TGI+VID+ P Sbjct: 95 GRMMNVIGKPIDGMEEL---DMQGAYPIHRAAPTFDQLSTHKEMLATGIKVIDLLEPYMK 151 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + + + VGER RE + + D L Sbjct: 152 GGKIGLFGGAGVGKTVLIMELINNIAKGHNGYSVFAGVGERTREGNDLLRDMLESGVIKY 211 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ +K++ +V +E P R L+ +T+AE F G Sbjct: 212 GEAFRKAMEDGKWDLSLVDKKELAESQATLVYGQMNEPPGARASVALSGLTVAEEFRDHG 271 Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 +++ +D+I RF + E++ G +P A GY ++ SE+ + ERI + + Sbjct: 272 GKNGEAADIMFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLASEMGAMQERI--TSTK 329 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + S LD L+R +AE G YP VDPL S SR+ D Sbjct: 330 NGSITSVQAVYVPADDLTDPAPATTFSHLDATTELSRKIAELGIYPAVDPLGSTSRILDP 389 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDIRLIGG 394 + L+ R+ E +DI I G Sbjct: 390 LIVGKAHYDCAQRVKQLLQRYNELQDIIAILG 421 >gi|89574035|gb|ABD77243.1| mitochondrial ATP synthase, H+ transporting F1 complex beta subunit [Equus caballus] Length = 318 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 88/261 (33%), Positives = 139/261 (53%), Gaps = 16/261 (6%) Query: 147 TGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE- 201 TGI+V+D+ P +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 6 TGIKVVDLLAPYAKAGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREG 64 Query: 202 ---VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLL 254 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 65 NDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLL 124 Query: 255 ILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVL 314 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ Sbjct: 125 FIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIY 182 Query: 315 VDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLV 373 V D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E ++ Sbjct: 183 VPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGTEHYEVA 242 Query: 374 SSLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 243 RGVQKILQDYKSLQDIIAILG 263 >gi|7708493|emb|CAB89941.1| ATP synthase beta subunit [Menyanthes trifoliata] Length = 461 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 79 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 135 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 195 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 196 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 255 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 256 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 313 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + DE + + + R++ Sbjct: 314 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYDTAQMVKQTLQRYK 373 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 374 ELQDIIAILG 383 >gi|28188331|gb|AAL92545.1| ATP synthase beta subunit [Coleochaete sp. 18b3] Length = 402 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + + + PA + + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---ELGPVDATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W + + + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYETAQGVKQTLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|121605235|ref|YP_982564.1| F0F1 ATP synthase subunit beta [Polaromonas naphthalenivorans CJ2] gi|190358236|sp|A1VPR5|ATPB2_POLNA RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|120594204|gb|ABM37643.1| ATP synthase F1, beta subunit [Polaromonas naphthalenivorans CJ2] Length = 474 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 90/274 (32%), Positives = 144/274 (52%), Gaps = 9/274 (3%) Query: 123 DLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMF 181 D+ + + PPA+ R+ F TGI+VID+ PL G + G+F G+G+GK+ LL+ Sbjct: 111 DIQWRSVHRAPPALARRSTRSEVFVTGIKVIDVLLPLERGGKAGLFGGAGVGKTVLLTEM 170 Query: 182 ARSDCFDKVIISL---VGERGREVREFIEDYLGDNLKKSVVVV-ATSDESPILRKMAPLT 237 + + IS+ +GER RE E D + S+V+V +E P R Sbjct: 171 IHNMVGHQEGISIFCGIGERCREGEELYRDMKDAGVLPSMVMVFGQMNEPPGSRFRVGHA 230 Query: 238 AVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A+T+AEYF + +VLL++D+I RF + E++ G++P GY ++ +EL L ER Sbjct: 231 ALTMAEYFRDDEHRDVLLLIDNIFRFIQAGSEVSGLMGQMPSRLGYQPTMGTELSGLEER 290 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 I + + G IT++ +V V D+ DP A S L IVL+R A EG +P +DPL S Sbjct: 291 I--ANTDSGAITSIQAVYVPADDFTDPAAVHTFSHLSASIVLSRKRASEGLFPAIDPLQS 348 Query: 357 VSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 S++A + L + + ++ + +DI Sbjct: 349 SSKMATPGIVGERHYALAQEIRRTLAQYAQLKDI 382 >gi|332105859|gb|AEE01392.1| ATP synthase beta chain [Tilia americana] Length = 493 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 111/365 (30%), Positives = 176/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I I ++ V + E + G V G + GR Sbjct: 45 KGRDTVGQQINITCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 104 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 105 IFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 161 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 162 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 221 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 222 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 281 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 282 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 339 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 340 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 399 Query: 390 RLIGG 394 I G Sbjct: 400 IAILG 404 >gi|110915710|gb|ABH02643.1| ATP synthase beta subunit [Vulpia microstachys] Length = 490 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATXGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|6687627|emb|CAB65030.1| ATP synthase beta subunit [Gustavia superba] Length = 498 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|5758906|gb|AAD50880.1| ATP synthase beta subunit [Phenakospermum guyannense] Length = 496 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 153/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF VLL +D+I RF Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQKVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTSQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|123325687|gb|ABM74468.1| ATP synthase beta subunit [Microcitrus australis] Length = 466 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGXDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGDN-VLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQXVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEXYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|37543305|gb|AAL92717.1| ATP synthase beta subunit [Coleochaete scutata] Length = 402 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 159/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D LG D + + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---ELGPVDATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W + + + + R++E Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|20467411|gb|AAL27836.1| ATPase beta subunit [Cedrus libani] Length = 433 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 26/318 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 69 GATLGRIFNVLGEPVD---NLGPVDARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 125 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 126 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 185 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 186 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 245 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 246 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 303 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 304 PATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 362 Query: 383 FEETRDIRLIGGYRPGVD 400 ++E +DI I PG+D Sbjct: 363 YKELQDIIAI----PGLD 376 >gi|62902827|gb|AAY19328.1| ATP synthase beta subunit [Parnassia tenella] Length = 478 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|319940399|ref|ZP_08014749.1| V-type ATP synthase subunit beta [Streptococcus anginosus 1_2_62CV] gi|319810455|gb|EFW06797.1| V-type ATP synthase subunit beta [Streptococcus anginosus 1_2_62CV] Length = 463 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 13/316 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD- 116 GQV+ + D +V + G + + F + S GR+ N +GKPIDG Sbjct: 44 GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFNGMGKPIDGGP 103 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 D L + L ++ + P A R ++ +TGI ID L GQ++ VF+GSG+ Sbjct: 104 DILPEKYLDIDGQAINPVA--RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKE 161 Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 L + AR S+ V+ + +G E F+ D + +S++ + +++ I Sbjct: 162 LAAQIARQATVLNSEENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSILFINLANDPAI 221 Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P RGYP +++ Sbjct: 222 ERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYT 281 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 L L ER G +KG++T + + + D+ PI D I +G I+L+R L G Sbjct: 282 NLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSRDLYNSGYR 341 Query: 349 PPVDPLASVSRLADKA 364 PP++ L S+SRL DK Sbjct: 342 PPINVLPSLSRLKDKG 357 >gi|315222207|ref|ZP_07864114.1| ATP synthase [Streptococcus anginosus F0211] gi|315188710|gb|EFU22418.1| ATP synthase [Streptococcus anginosus F0211] Length = 463 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 95/316 (30%), Positives = 158/316 (50%), Gaps = 13/316 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGD- 116 GQV+ + D +V + G + + F + S GR+ N +GKPIDG Sbjct: 44 GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFNGMGKPIDGGP 103 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 D L + L ++ + P A R ++ +TGI ID L GQ++ VF+GSG+ Sbjct: 104 DILPEKYLDIDGQAINPVA--RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKE 161 Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 L + AR S+ V+ + +G E F+ D + +S++ + +++ I Sbjct: 162 LAAQIARQATVLNSEENFAVVFAAMGITFEEAEFFMNDLRETGAIDRSILFINLANDPAI 221 Query: 230 LRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + + D +VL+I+ +T + ++RE++ E+P RGYP +++ Sbjct: 222 ERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLYT 281 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 L L ER G +KG++T + + + D+ PI D I +G I+L+R L G Sbjct: 282 NLSTLYERAGRLVGKKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILSRDLYNSGYR 341 Query: 349 PPVDPLASVSRLADKA 364 PP++ L S+SRL DK Sbjct: 342 PPINVLPSLSRLKDKG 357 >gi|257852940|gb|ACV71481.1| ATP synthase beta subunit [Tapura guianensis] Length = 490 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 96 GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 215 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 392 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 393 LQDIIAILG 401 >gi|99640659|emb|CAJ45104.1| putative beta subunit of chloroplast ATP synthase [Thyrsopteris elegans] gi|99640665|emb|CAJ45105.1| putative beta subunit of chloroplast ATP synthase [Thyrsopteris elegans] Length = 493 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 107/336 (31%), Positives = 171/336 (50%), Gaps = 29/336 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 106 GRISNVLGEPVD---NLGPVESSTRFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 NL +S V V +E P R TA T+AEYF +VLL +D+I RF + E Sbjct: 223 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399 Query: 387 RDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 +DI I PG+D + ++ V + I FL Q Sbjct: 400 QDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 431 >gi|7708272|emb|CAB90057.1| ATP synthase beta subunit [Dichapetalum brownii] Length = 478 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 92 GATLGRIFNVLGEPVDDLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 150 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 210 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 211 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 270 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 328 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 329 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 388 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 389 LQDIIAILG 397 >gi|241912858|gb|ACS72107.1| AtpB [Gonatostylis vieillardii] Length = 489 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D+ + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEKNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|161723294|ref|NP_326067.2| F0F1 ATP synthase subunit beta [Mycoplasma pulmonis UAB CTIP] Length = 511 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 96/286 (33%), Positives = 152/286 (53%), Gaps = 16/286 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDS--LGKGDLSM-EIMSKVPPAMNRQRVEKGFKTGI 149 + I S GR+I+ +G+ +D +GK M E SK + +TGI Sbjct: 99 YSIPISEKLLGRIIDPVGRILDDPTHPLVGKQYAPMIETESKQTEKYKVFPKTQILETGI 158 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKV-IISLVGERGREVRE 204 +VID+ P+ G + G+ G+G+GK+ L++ F + D V + S +GER RE E Sbjct: 159 KVIDVLLPIPSGGKTGLLGGAGVGKTVVVQELINTFIKHH--DGVSVFSGIGERIREGHE 216 Query: 205 FIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261 E+ LG L K+ + +ESP LR + T V +AEYF + G NVLL +D+I R Sbjct: 217 LWEEAKELG-FLDKTTFIFGQMNESPGLRLRSGFTGVKVAEYFRNNLGKNVLLFMDNIFR 275 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 + + E+++ + P A GY + SE+ +L ERI + G+IT++ ++ + D+ Sbjct: 276 YMQAGSEVSSLLEKTPSAVGYQPMLVSEIGKLQERI--NSNNDGDITSIQAMYIPADDFT 333 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 DP A + + D I+L+R LA EG YP VDPL S S+L +++ Sbjct: 334 DPAAVAAFAHFDATIILSRQLAAEGLYPAVDPLVSSSKLLSTKFTS 379 >gi|21633305|gb|AAM52127.1| ATP synthase beta subunit [Hewittia sublobata] gi|21633307|gb|AAM52128.1| ATP synthase beta subunit [Hewittia scandens] Length = 490 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|323715508|gb|ADY04822.1| ATP synthase beta subunit [Gentiana saponaria] Length = 483 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 162/311 (52%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---NLGPVDTRTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 206 VINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|306996341|gb|ADN21390.1| ATP synthase beta subunit [Rhizobium loessense] Length = 378 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 158/306 (51%), Gaps = 17/306 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+P+D L I P +++ + TGI+V+D+ P G Sbjct: 50 LGRIMNVIGEPVDEAGPLVTAS-KRAIHQDAPSYVDQSTEAQILVTGIKVVDLLAPYAKG 108 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED----Y 209 +IG+F G+G+GK+ L+ + A++ V VGER RE E IE + Sbjct: 109 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNKH 167 Query: 210 LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREI 269 G K+ +V +E P R LT +T+AE F +G +VL +D+I RF + E+ Sbjct: 168 GGGEGSKAALVYGQMNEPPGARARVALTGLTVAENFRDQGQDVLFFVDNIFRFTQAGSEV 227 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ ++ ERI + G+IT+V ++ V D+ DP + Sbjct: 228 SALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATSF 285 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRD 388 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ +D Sbjct: 286 AHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQD 345 Query: 389 IRLIGG 394 I I G Sbjct: 346 IIAILG 351 >gi|195183509|dbj|BAG66968.1| ATP synthase beta subunit [Isodendrion laurifolium] Length = 489 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L K + + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGKEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|110915636|gb|ABH02606.1| ATP synthase beta subunit [Festuca rubra] Length = 471 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 77 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 254 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 311 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 312 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKXTLQRY 371 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 372 KELQDIIAILG 382 >gi|113910956|gb|ABI48210.1| ATPase beta subunit [Juniperus sp. Qiu 96270] Length = 448 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D +LG D L+ + + PA + ++ +TG Sbjct: 51 GPLSVPVGETTLGRIFNVLGEPVD---NLGPVDALTTSPIHRSAPAFTQLDIKFSILETG 107 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE 204 I+V+D+ P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 108 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGND 166 Query: 205 FIEDYLGDNL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLI 255 ++ + K +V +E P R LTA+T+AEYF +VLL Sbjct: 167 LYKEMKESGVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLF 226 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 227 IDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYV 284 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + E + Sbjct: 285 PADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGKEHYETAQ 344 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 345 GVKQTLQRYKELQDIIAILG 364 >gi|21633397|gb|AAM52173.1| ATP synthase beta subunit [Bonamia media] Length = 484 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|15425578|emb|CAC60250.1| ATP synthase beta subunit [Nephrophyllidium crista-galli] Length = 479 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYDTAQMVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|7708542|emb|CAB90093.1| ATP synthase beta subunit [Pittosporum fairchildii] Length = 474 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 96 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|19033063|gb|AAL83516.1|AF408788_1 ATP synthase beta subunit [Coleochaete orbicularis] gi|37543303|gb|AAL92716.1| ATP synthase beta subunit [Coleochaete scutata] Length = 402 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + + + PA + + F+TGI+V+D+ P Sbjct: 38 ATLGRIFNVLGEPVD---ELGPVDATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 154 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W + + + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|302390561|ref|YP_003826382.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermosediminibacter oceani DSM 16646] gi|302201189|gb|ADL08759.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermosediminibacter oceani DSM 16646] Length = 460 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 96/326 (29%), Positives = 160/326 (49%), Gaps = 13/326 (3%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 + G GQV+ +N D +V + G I+ + F + S GRV + Sbjct: 32 IETGDGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSTDMLGRVFD 91 Query: 108 ALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGV 166 G+P D G + + L + P A R + +TGI ID L GQ++ + Sbjct: 92 GFGRPRDKGPMIIPEKRLDINGSPINPTA--RDYPSEFIQTGISAIDGLNTLVRGQKLPI 149 Query: 167 FAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVV 219 F+GSG+ + L + AR +D V+ + +G E FI D+ + ++V+ Sbjct: 150 FSGSGLPHAQLAAQIARQAKVLGTDSKFAVVFAAMGITFEEADYFISDFRRTGAIDRTVL 209 Query: 220 VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPV 278 + +++ I R P A+T AE+ + + D +VL+IL +T + ++RE++ E+P Sbjct: 210 FINLANDPAIERIATPRMALTCAEFLAFEKDMHVLVILTDMTNYCEALREVSAARKEVPG 269 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 RGYP ++++L + ER G KG+IT + + + D+ PI D I +G I+L Sbjct: 270 RRGYPGYLYTDLSTIYERAGRIRGRKGSITQIPILTMPEDDKTHPIPDLTGYITEGQIIL 329 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKA 364 +R L +G YPP+D L S+SRL DK Sbjct: 330 SRELHRKGIYPPIDVLPSLSRLKDKG 355 >gi|56675513|emb|CAB44208.2| H(+)-transporting ATP synthase [Keraudrenia hermanniifolia] Length = 487 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+PID +LG D + + K PA + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|4995179|emb|CAB44030.1| H(+)-transporting ATP synthase [Gossypium hirsutum] Length = 476 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P Sbjct: 84 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAP 140 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 141 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 200 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 201 INEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 260 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 261 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 318 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 319 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 378 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 379 ELQDIIAILG 388 >gi|6689562|emb|CAB65490.1| ATP synthase beta subunit [Verbascum thapsus] Length = 498 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINQENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTXEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|21633403|gb|AAM52176.1| ATP synthase beta subunit [Neuropeltis acuminata] Length = 490 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 97/302 (32%), Positives = 155/302 (51%), Gaps = 20/302 (6%) Query: 103 GRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N LGKP+D +LG D + I P + F+TGI+V+D+ P Sbjct: 106 GRIFNVLGKPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLAPYRR 162 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIHE 222 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E Sbjct: 223 ENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSE 282 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 VSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 340 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S L + + + + + R++E + Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRILGEEHYETAQRVKQTLQRYKELQ 400 Query: 388 DI 389 DI Sbjct: 401 DI 402 >gi|14718066|gb|AAK72774.1| ATP synthase beta subunit [Greyia radlkoferi] Length = 483 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 97 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRY 391 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 392 KELQDIIAILG 402 >gi|315147205|gb|EFT91221.1| ATP synthase ab [Enterococcus faecalis TX4244] Length = 458 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 21/320 (6%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ IN D + I++ D + H +SP GRV + LG+ D Sbjct: 42 GQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPD--MMGRVFDGLGRLKDN 99 Query: 116 DDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 L K D++ E+++ V R ++ +TGI ID L GQ++ VF+ SG+ Sbjct: 100 GPELLPEKKLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGL 155 Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 L + AR S+ V+ + +G E F+ED+ + +SV+ + ++ Sbjct: 156 PHKELAAQIARQANVLNSEEEFAVVFAAIGITFEEAEYFMEDFRQTGAIDRSVLFMNLAN 215 Query: 226 ESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 + I R P A+T AEY + KG +VL+I+ +T + ++REI+ E+P RGYP Sbjct: 216 DPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPG 275 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 +++ L L ER G KG++T + + + ++ PI D I +G I+L+R L + Sbjct: 276 YLYTNLATLYERAGRIRGSKGSVTQIPILTMPEEDKTHPIPDLTGYITEGQIILSRELYK 335 Query: 345 EGRYPPVDPLASVSRLADKA 364 G PP+D L S+SRL DK Sbjct: 336 SGIQPPIDVLPSLSRLKDKG 355 >gi|309322341|ref|YP_003934192.1| ATP synthase CF1 beta chain [Cedrus deodara] gi|228017084|gb|ACP51906.1| ATP synthase CF1 beta subunit [Cedrus deodara] gi|307683267|dbj|BAJ19575.1| ATP synthase CF1 beta chain [Cedrus deodara] Length = 492 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 26/318 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 337 PATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 395 Query: 383 FEETRDIRLIGGYRPGVD 400 ++E +DI I PG+D Sbjct: 396 YKELQDIIAI----PGLD 409 >gi|184127851|gb|ACC67825.1| ATP synthase beta chain [Marattia douglasii] Length = 399 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 161/310 (51%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P Sbjct: 12 LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLG 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 69 RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 127 Query: 212 DNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 + K K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 128 NQEKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 187 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 188 SEVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 245 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 246 TTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 304 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 305 ELQDIIAILG 314 >gi|56675901|emb|CAB89914.2| ATP synthase beta subunit [Ipomoea mauritiana] Length = 486 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 99 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 215 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 216 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 394 KELQDIIAILG 404 >gi|21633441|gb|AAM52195.1| ATP synthase beta subunit [Dinetus truncatus] Length = 487 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 101/313 (32%), Positives = 159/313 (50%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LGKP+D +LG D + I P + F+TGI+V+D+ Sbjct: 99 GSTLGRIFNVLGKPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +K+ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 213 Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262 S V+ VA S +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 214 SGVINEETVAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 273 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 274 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 331 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 332 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 391 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 392 RYKELQDIIAILG 404 >gi|7708674|emb|CAB90012.1| ATP synthase beta subunit [Tetracera asiatica] Length = 483 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+PID +LG D + + + PA + + F TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFXQLDTKLSIFDTGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|18077537|emb|CAC88838.1| atpD beta synthase chain [Pseudomonas aeruginosa] Length = 258 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 123/222 (55%), Gaps = 6/222 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 23 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G +VLL +D+I Sbjct: 83 GNDFYHEMKDSNVLDKVALVFGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFIDNIY 142 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + +KG+IT++ +V V D+ Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDL 200 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242 >gi|75338403|sp|Q9TMQ4|ATPB_ORNLO RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|5758903|gb|AAD50877.1| ATP synthase beta subunit [Ornithogalum longebracteatum] gi|30351883|emb|CAD48093.1| ATP synthase beta subunit [Stellarioides sp. MP H608] Length = 495 Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLGSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|325958196|ref|YP_004289662.1| V-type ATP synthase subunit beta [Methanobacterium sp. AL-21] gi|325329628|gb|ADZ08690.1| V-type ATP synthase beta chain [Methanobacterium sp. AL-21] Length = 463 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 95/309 (30%), Positives = 157/309 (50%), Gaps = 15/309 (4%) Query: 94 RISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVID 153 ++ S GR+ N G PIDG + D ++I R+ + +TGI ID Sbjct: 83 KLGVSPDMLGRIFNGTGVPIDGGPEIIP-DQELDINGNPMNPSAREFPAEFIETGISTID 141 Query: 154 IFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIE 207 L GQ++ +F+GSG+ + L + AR + VI + +G E F+ Sbjct: 142 GMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVVGEETEFAVIFAAMGITHEEANYFMR 201 Query: 208 DY-LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 D+ L++ V + +D+ I R + P A+T AEYF+ + + +VL+IL +T + + Sbjct: 202 DFERTGALERVTVFMNLADDPAIERIITPKMALTTAEYFAFELNMHVLVILTDLTNYCEA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 +REI+ E+P RGYP ++++L + ER G ++G+IT + +++ D+ PI Sbjct: 262 LREISAARDEVPGRRGYPGYMYTDLATMYERAGRIVGKEGSITQMPILVMPQDDITHPIP 321 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIH 381 D I +G IVL+R L +G YPPVD L S+SRL + + ++ VS L Sbjct: 322 DLTGYITEGQIVLSRDLFRKGIYPPVDVLPSLSRLMSGGIGEGQTREDHSGVSD--QLYS 379 Query: 382 RFEETRDIR 390 + E RD+R Sbjct: 380 AYAEGRDLR 388 >gi|99640396|emb|CAJ45069.1| putative beta subunit of chloroplast ATP synthase [Alsophila capensis] Length = 493 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S P PA + + F+TGI+V+D+ P Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 N+ +S V V +E P R TA+T+AEYF +VLL +D+I RF + E Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399 Query: 387 RDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 400 QDIIAI----PGLD 409 >gi|65332600|gb|AAY42224.1| ATP synthase beta subunit [Anisophyllea disticha] Length = 479 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSFFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G ++G+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 381 KELQDIIAILG 391 >gi|7708468|emb|CAB89924.1| ATP synthase beta subunit [Lactoris fernandeziana] Length = 491 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K +N+GQ I + ++ V + + ++ G V G + GR Sbjct: 43 KGRENIGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 102 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 103 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 160 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 219 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 220 LTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 279 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 280 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 337 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 338 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 397 Query: 390 RLIGG 394 I G Sbjct: 398 IAILG 402 >gi|21633297|gb|AAM52123.1| ATP synthase beta subunit [Ipomoea pes-tigridis] Length = 490 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|17367086|sp|Q9TKI7|ATPB_MEDSA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|5679309|gb|AAD46914.1|AF163770_1 ATP synthase beta subunit [Medicago sativa] Length = 490 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+PID + G S I P + F+TGI+V+D+ P Sbjct: 104 GATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 223 NEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 283 SEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 341 TTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|212896602|gb|ACJ38504.1| membrane-bound ATP synthase subunit B [Amphicarpaea bracteata] Length = 470 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + E ++ G V G + GR Sbjct: 33 KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAPLSVPVGGATLGR 92 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P + F+TGI+V+D+ P G Sbjct: 93 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 149 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 150 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 209 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 210 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 269 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 270 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 327 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 328 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 387 Query: 390 RLIGG 394 I G Sbjct: 388 IAILG 392 >gi|222446757|gb|ACM51416.1| ATP synthase CF1 beta subunit [Caulerpa filiformis] Length = 453 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 102/309 (33%), Positives = 161/309 (52%), Gaps = 24/309 (7%) Query: 103 GRVINALGKPID--GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GR+ N L +P+D GD S K I + P ++ + F+TGI+V+D+ P Sbjct: 88 GRIFNVLREPVDNLGDVSDSK---RSSIHREAPAFVDLETTLSIFETGIKVVDLLAPYRR 144 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYLGD 212 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + D Sbjct: 145 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVID 203 Query: 213 --NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AE+F + +VLL +D+I RF + Sbjct: 204 EQNLSESKVTLVYGQMNEPPGARMRVALTALTLAEFFRDVQKQDVLLFIDNIFRFVQAGS 263 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ SE+ L ERI + + G+IT++ ++ V D+ DP + Sbjct: 264 EVSALLGRMPSAVGYQPTLASEMGGLQERI--TSTKDGSITSIQAIYVPADDLTDPAPAT 321 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + R++E Sbjct: 322 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEEHYNCAQNVQQTLQRYKE 380 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 381 LQDIIAILG 389 >gi|8132536|gb|AAF73294.1| ATP synthase beta subunit [Zamia furfuracea] Length = 486 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 107/367 (29%), Positives = 175/367 (47%), Gaps = 33/367 (8%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D GQ IR+ ++ V + + ++ G V G + GR Sbjct: 42 KGQDTAGQEIRVTCEVQQLLGNNKVRAVAMSATDGLTRGMKVIDTGAPLSVPVGGATLGR 101 Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 102 IFNVLGEPVD---NLGPVDARTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158 Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNL---- 214 +IG+F G+G+GK+ L+ + A++ V + ER RE + + + Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYVEMKESGVINEQ 217 Query: 215 ----KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREI 269 K +V +E P R LTA+T+AEYF + +VLL +D+I RF + E+ Sbjct: 218 DISRSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEV 277 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 278 SALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 335 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E + Sbjct: 336 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 394 Query: 388 DIRLIGG 394 DI I G Sbjct: 395 DIIAILG 401 >gi|21633299|gb|AAM52124.1| ATP synthase beta subunit [Merremia dissecta] Length = 490 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|14718147|gb|AAK72812.1| ATP synthase beta subunit [Neurada procumbens] Length = 476 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 90 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 384 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 385 KELQDIIAILG 395 >gi|19033073|gb|AAL83521.1|AF408793_1 ATP synthase beta subunit [Chaetosphaeridium ovalis] Length = 402 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR+ N LG+P+D D ++ I P F+TGI+V+D+ P G Sbjct: 40 LGRIFNVLGEPVD-DMGPVNATVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRG 98 Query: 162 QRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI----------E 207 +IG+F G+G+GK+ L+ + A++ V + ER RE + E Sbjct: 99 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVINE 157 Query: 208 DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 + LG++ K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 158 ENLGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 215 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 216 SEVSALLGRMPSAVGYQPTLSTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 273 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 274 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQRYK 332 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 333 ELQDIIAILG 342 >gi|330836722|ref|YP_004411363.1| V-type ATP synthase beta chain [Spirochaeta coccoides DSM 17374] gi|329748625|gb|AEC01981.1| V-type ATP synthase beta chain [Spirochaeta coccoides DSM 17374] Length = 474 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 82/271 (30%), Positives = 142/271 (52%), Gaps = 9/271 (3%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 + GRV++ LG+ DG ++ G ++ R+ +TGI VID T Sbjct: 100 TEAMLGRVMDGLGRSRDGA-AIPTGTEERDVNGTPINPTAREYPRDFIQTGISVIDAMTT 158 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFD------KVIISLVGERGREVREFIEDYLG 211 L GQ++ +F+G+G+ + L + R ++ + +G + R FI+ + Sbjct: 159 LIQGQKLPIFSGNGMDHNKLAAQIVRQAKVRGGKSEFAIVFAAMGVKYDVARYFIDSFEQ 218 Query: 212 DNLKKSVVV-VATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREI 269 + V + ++ +D+ I R + P +A+T+AE+ + K VL+I+ +T + S+REI Sbjct: 219 AGVLDDVALFLSLADDPSIERTITPRSALTLAEHLAFDKDKQVLVIMTDMTNYCESLREI 278 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 +T GE+P +GYP ++S L L ER G KG+IT + + + D+ + PI D Sbjct: 279 STQRGEIPSRKGYPGYLYSNLAELYERSGKIAGRKGSITQLPILTMPNDDISHPIPDLTG 338 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 I +G IV +R+++ G YPP+ PL S+SRL Sbjct: 339 YITEGQIVFDRTMSGRGIYPPIAPLPSLSRL 369 >gi|225572916|ref|ZP_03781671.1| hypothetical protein RUMHYD_01107 [Blautia hydrogenotrophica DSM 10507] gi|225039729|gb|EEG49975.1| hypothetical protein RUMHYD_01107 [Blautia hydrogenotrophica DSM 10507] Length = 456 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 28/317 (8%) Query: 98 SACWCGRVINALGKPIDG------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRV 151 S GRV + LG+PID D+ L M ++V P E+ +TG+ Sbjct: 82 SGDMLGRVFDGLGRPIDDGPEILPDERRDINGLPMNPAARVYP-------EEFIQTGVSA 134 Query: 152 IDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVRE 204 ID L GQ++ +F+ SG+ + L + AR S+ F V+ + +G E Sbjct: 135 IDGLNTLVRGQKLPIFSASGLPHAQLAAQIARQAKVRGTSEPF-AVVFAAMGITFEESNF 193 Query: 205 FIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRF 262 F+E + + ++V+ + +++ + R P A+T AEY + K +VL+IL IT + Sbjct: 194 FVESFKETGAIDRTVLFINLANDPAVERIATPKMALTAAEYLAFEKNMHVLVILTDITNY 253 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 A ++RE++ E+P RGYP ++++L L ER G + G+IT + + + D+ Sbjct: 254 ADALREVSAARKEVPGRRGYPGYMYTDLATLYERAGRQTGKNGSITMIPILTMPEDDKTH 313 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA-----WSADEKKLVSSLT 377 PI D I +G I+L+R L G PP+D L S+SRL DK AD ++ L Sbjct: 314 PIPDLTGYITEGQIILSRELYRRGVTPPIDVLPSLSRLKDKGIGEGKTRADHSNTMNQLF 373 Query: 378 HLIHRFEETRDIRLIGG 394 R ++ +++ I G Sbjct: 374 AAYSRGKDAKELMTILG 390 >gi|164566155|gb|ABY61220.1| ATP synthase beta subunit [Marattia laxa] Length = 394 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 24/310 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL- 210 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E + Sbjct: 64 RGGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESKVI 122 Query: 211 -GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 123 NQENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 182 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 183 SEVSASLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 240 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFE 384 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R++ Sbjct: 241 TTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYK 299 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 300 ELQDIIAILG 309 >gi|29376066|ref|NP_815220.1| V-type ATP synthase subunit B [Enterococcus faecalis V583] gi|227518691|ref|ZP_03948740.1| V family ATP synthase subunit B [Enterococcus faecalis TX0104] gi|229545889|ref|ZP_04434614.1| V family ATP synthase subunit B [Enterococcus faecalis TX1322] gi|229550082|ref|ZP_04438807.1| V family ATP synthase subunit B [Enterococcus faecalis ATCC 29200] gi|255972860|ref|ZP_05423446.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T1] gi|255975916|ref|ZP_05426502.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T2] gi|256619006|ref|ZP_05475852.1| sodium-transporting two-sector ATPase [Enterococcus faecalis ATCC 4200] gi|256762432|ref|ZP_05503012.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T3] gi|256853061|ref|ZP_05558431.1| V-type ATPase [Enterococcus faecalis T8] gi|256958917|ref|ZP_05563088.1| sodium-transporting two-sector ATPase [Enterococcus faecalis DS5] gi|256961988|ref|ZP_05566159.1| sodium-transporting two-sector ATPase [Enterococcus faecalis Merz96] gi|256965186|ref|ZP_05569357.1| sodium-transporting two-sector ATPase [Enterococcus faecalis HIP11704] gi|257078948|ref|ZP_05573309.1| sodium-transporting two-sector ATPase [Enterococcus faecalis JH1] gi|257082606|ref|ZP_05576967.1| sodium-transporting two-sector ATPase [Enterococcus faecalis E1Sol] gi|257085244|ref|ZP_05579605.1| sodium-transporting two-sector ATPase [Enterococcus faecalis Fly1] gi|257086810|ref|ZP_05581171.1| sodium-transporting two-sector ATPase [Enterococcus faecalis D6] gi|257089819|ref|ZP_05584180.1| sodium-transporting two-sector ATPase [Enterococcus faecalis CH188] gi|257416036|ref|ZP_05593030.1| sodium-transporting two-sector ATPase [Enterococcus faecalis AR01/DG] gi|257419235|ref|ZP_05596229.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T11] gi|257422684|ref|ZP_05599674.1| V-type ATPase [Enterococcus faecalis X98] gi|293382287|ref|ZP_06628226.1| V-type sodium ATPase, B subunit [Enterococcus faecalis R712] gi|293389453|ref|ZP_06633910.1| V-type sodium ATPase, B subunit [Enterococcus faecalis S613] gi|294779087|ref|ZP_06744498.1| ATP synthase ab C-terminal domain protein [Enterococcus faecalis PC1.1] gi|300861269|ref|ZP_07107356.1| ATP synthase ab C-terminal domain protein [Enterococcus faecalis TUSoD Ef11] gi|307271083|ref|ZP_07552366.1| ATP synthase [Enterococcus faecalis TX4248] gi|307273289|ref|ZP_07554535.1| ATP synthase [Enterococcus faecalis TX0855] gi|307278499|ref|ZP_07559573.1| ATP synthase [Enterococcus faecalis TX0860] gi|307291490|ref|ZP_07571373.1| ATP synthase [Enterococcus faecalis TX0411] gi|312900693|ref|ZP_07759990.1| ATP synthase ab [Enterococcus faecalis TX0470] gi|312903241|ref|ZP_07762421.1| ATP synthase [Enterococcus faecalis TX0635] gi|312907471|ref|ZP_07766462.1| ATP synthase [Enterococcus faecalis DAPTO 512] gi|312910089|ref|ZP_07768936.1| ATP synthase [Enterococcus faecalis DAPTO 516] gi|312951427|ref|ZP_07770324.1| ATP synthase [Enterococcus faecalis TX0102] gi|81722391|sp|Q834X8|VATB_ENTFA RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|29343528|gb|AAO81290.1| V-type ATPase, subunit B [Enterococcus faecalis V583] gi|227073871|gb|EEI11834.1| V family ATP synthase subunit B [Enterococcus faecalis TX0104] gi|229304786|gb|EEN70782.1| V family ATP synthase subunit B [Enterococcus faecalis ATCC 29200] gi|229308957|gb|EEN74944.1| V family ATP synthase subunit B [Enterococcus faecalis TX1322] gi|255963878|gb|EET96354.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T1] gi|255968788|gb|EET99410.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T2] gi|256598533|gb|EEU17709.1| sodium-transporting two-sector ATPase [Enterococcus faecalis ATCC 4200] gi|256683683|gb|EEU23378.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T3] gi|256711520|gb|EEU26558.1| V-type ATPase [Enterococcus faecalis T8] gi|256949413|gb|EEU66045.1| sodium-transporting two-sector ATPase [Enterococcus faecalis DS5] gi|256952484|gb|EEU69116.1| sodium-transporting two-sector ATPase [Enterococcus faecalis Merz96] gi|256955682|gb|EEU72314.1| sodium-transporting two-sector ATPase [Enterococcus faecalis HIP11704] gi|256986978|gb|EEU74280.1| sodium-transporting two-sector ATPase [Enterococcus faecalis JH1] gi|256990636|gb|EEU77938.1| sodium-transporting two-sector ATPase [Enterococcus faecalis E1Sol] gi|256993274|gb|EEU80576.1| sodium-transporting two-sector ATPase [Enterococcus faecalis Fly1] gi|256994840|gb|EEU82142.1| sodium-transporting two-sector ATPase [Enterococcus faecalis D6] gi|256998631|gb|EEU85151.1| sodium-transporting two-sector ATPase [Enterococcus faecalis CH188] gi|257157864|gb|EEU87824.1| sodium-transporting two-sector ATPase [Enterococcus faecalis ARO1/DG] gi|257161063|gb|EEU91023.1| sodium-transporting two-sector ATPase [Enterococcus faecalis T11] gi|257164508|gb|EEU94468.1| V-type ATPase [Enterococcus faecalis X98] gi|291080232|gb|EFE17596.1| V-type sodium ATPase, B subunit [Enterococcus faecalis R712] gi|291081070|gb|EFE18033.1| V-type sodium ATPase, B subunit [Enterococcus faecalis S613] gi|294453812|gb|EFG22203.1| ATP synthase ab C-terminal domain protein [Enterococcus faecalis PC1.1] gi|295112937|emb|CBL31574.1| Archaeal/vacuolar-type H+-ATPase subunit B [Enterococcus sp. 7L76] gi|300850308|gb|EFK78058.1| ATP synthase ab C-terminal domain protein [Enterococcus faecalis TUSoD Ef11] gi|306497450|gb|EFM66984.1| ATP synthase [Enterococcus faecalis TX0411] gi|306504842|gb|EFM74038.1| ATP synthase [Enterococcus faecalis TX0860] gi|306510274|gb|EFM79298.1| ATP synthase [Enterococcus faecalis TX0855] gi|306512581|gb|EFM81230.1| ATP synthase [Enterococcus faecalis TX4248] gi|310626499|gb|EFQ09782.1| ATP synthase [Enterococcus faecalis DAPTO 512] gi|310630583|gb|EFQ13866.1| ATP synthase [Enterococcus faecalis TX0102] gi|310633117|gb|EFQ16400.1| ATP synthase [Enterococcus faecalis TX0635] gi|311289362|gb|EFQ67918.1| ATP synthase [Enterococcus faecalis DAPTO 516] gi|311292174|gb|EFQ70730.1| ATP synthase ab [Enterococcus faecalis TX0470] gi|315027332|gb|EFT39264.1| ATP synthase [Enterococcus faecalis TX2137] gi|315029582|gb|EFT41514.1| ATP synthase [Enterococcus faecalis TX4000] gi|315033903|gb|EFT45835.1| ATP synthase [Enterococcus faecalis TX0017] gi|315036913|gb|EFT48845.1| ATP synthase [Enterococcus faecalis TX0027] gi|315144482|gb|EFT88498.1| ATP synthase [Enterococcus faecalis TX2141] gi|315150600|gb|EFT94616.1| ATP synthase ab [Enterococcus faecalis TX0012] gi|315152549|gb|EFT96565.1| ATP synthase ab [Enterococcus faecalis TX0031] gi|315155828|gb|EFT99844.1| ATP synthase [Enterococcus faecalis TX0043] gi|315158004|gb|EFU02021.1| ATP synthase ab [Enterococcus faecalis TX0312] gi|315160511|gb|EFU04528.1| ATP synthase ab [Enterococcus faecalis TX0645] gi|315166793|gb|EFU10810.1| ATP synthase ab [Enterococcus faecalis TX1341] gi|315169660|gb|EFU13677.1| ATP synthase ab [Enterococcus faecalis TX1342] gi|315172375|gb|EFU16392.1| ATP synthase ab [Enterococcus faecalis TX1346] gi|315575926|gb|EFU88117.1| ATP synthase [Enterococcus faecalis TX0309B] gi|315577600|gb|EFU89791.1| ATP synthase [Enterococcus faecalis TX0630] gi|315580579|gb|EFU92770.1| ATP synthase [Enterococcus faecalis TX0309A] gi|323480660|gb|ADX80099.1| V-type sodium ATPase subunit B [Enterococcus faecalis 62] gi|327535067|gb|AEA93901.1| proton (H+) or sodium (Na+) translocating V-type ATPase (V-ATPase), subunit B [Enterococcus faecalis OG1RF] gi|329571380|gb|EGG53067.1| ATP synthase [Enterococcus faecalis TX1467] Length = 458 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 159/320 (49%), Gaps = 21/320 (6%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ IN D + I++ D + H +SP GRV + LG+ D Sbjct: 42 GQVLEINGDKAMVQIFEGTSNINIRDSKVRFLGHPLELGVSPD--MMGRVFDGLGRLKDN 99 Query: 116 DDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGI 172 L K D++ E+++ V R ++ +TGI ID L GQ++ VF+ SG+ Sbjct: 100 GPELLPEKKLDINGEVINPVA----RDYPDEFIQTGISAIDHLNTLVRGQKLPVFSASGL 155 Query: 173 GKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSD 225 L + AR S+ V+ + +G E F+ED+ + +SV+ + ++ Sbjct: 156 PHKELAAQIARQANVLNSEEEFAVVFAAIGITFEEAEYFMEDFRQTGAIDRSVLFMNLAN 215 Query: 226 ESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPT 284 + I R P A+T AEY + KG +VL+I+ +T + ++REI+ E+P RGYP Sbjct: 216 DPAIERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISAARREVPGRRGYPG 275 Query: 285 SVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAE 344 +++ L L ER G KG++T + + + ++ PI D I +G I+L+R L + Sbjct: 276 YLYTNLATLYERAGRIRGSKGSVTQIPILTMPEEDKTHPIPDLTGYITEGQIILSRELYK 335 Query: 345 EGRYPPVDPLASVSRLADKA 364 G PP+D L S+SRL DK Sbjct: 336 SGIQPPIDVLPSLSRLKDKG 355 >gi|301062825|ref|ZP_07203423.1| alternate F1F0 ATPase, F1 subunit alpha [delta proteobacterium NaphS2] gi|300443087|gb|EFK07254.1| alternate F1F0 ATPase, F1 subunit alpha [delta proteobacterium NaphS2] Length = 551 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 101/337 (29%), Positives = 169/337 (50%), Gaps = 7/337 (2%) Query: 55 NSDNLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPI 113 + D G V+ I D V I G E +S G+ V GR P S GRV++ LG+P+ Sbjct: 67 DPDISGMVLDILPDRVGIILFGPSEAVSAGNQVARSGRVLDVPVSDHLIGRVVDPLGRPM 126 Query: 114 DGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIG 173 DG + + + + ++ + PP M+R V K +TG++V+D P+ GQR + G Sbjct: 127 DGKGII-EANKRLVVLREAPPIMDRAPVVKPLQTGLKVVDALFPIGRGQRELILGDRQTG 185 Query: 174 KSTL-LSMFARSDCFDKVII-SLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPIL 230 K+ L L D + I +G+R + + + + + + SVV+V D+ P L Sbjct: 186 KTALALDAIVNQKGKDVLCIYCAIGQRSSGIAKVVAELEREGAMDYSVVIVVEGDDPPGL 245 Query: 231 RKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSEL 290 + +AP A T+ E+F +G +VL++ D +TR A + R+++ P +P +F Sbjct: 246 QFIAPYAATTMGEFFMEQGKDVLIVYDDMTRHALAYRQLSLLLRRPPGREAFPGDIFYVH 305 Query: 291 PRLLERIGPSEKEK--GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 RLLER ++E+ G++TA+ + N + I ++ SI DG I L+ L ++G Sbjct: 306 SRLLERSTHLKEERGGGSLTALPIAETEAQNISAYIPTNLISITDGQIYLSPELFQKGVL 365 Query: 349 PPVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 P VD SVSR+ KA +++ L +F+E Sbjct: 366 PAVDVGKSVSRVGGKAQIPAYRQVAGDLRLSYTQFQE 402 >gi|262038362|ref|ZP_06011739.1| V-type sodium ATPase, B subunit [Leptotrichia goodfellowii F0264] gi|261747580|gb|EEY35042.1| V-type sodium ATPase, B subunit [Leptotrichia goodfellowii F0264] Length = 459 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 94/323 (29%), Positives = 164/323 (50%), Gaps = 13/323 (4%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPID-GD 116 G+V+ +N D + I+L D + F + S GR+ + LG+P D G Sbjct: 42 GRVLEVNGDKAMVQLFESSAGINLKDTKVRFLGKPLSLGVSEDMIGRIFDGLGRPKDNGP 101 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + L + ++ P A R + +TG+ ID L GQ++ +F+GSG+ + Sbjct: 102 KIIPEKSLDINGVAINPVA--RDYPSEFIQTGVSSIDGLNTLVRGQKLPIFSGSGLPHAE 159 Query: 177 LLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 L + AR S V+ +G E + FI+D+ + ++V+ + +D+ I Sbjct: 160 LAAQIARQARVLGSGSKFAVVFGAIGITFEEAQFFIDDFTKTGAIDRAVLFMNLADDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + KG +VL+IL +T + ++RE++ E+P RGYP +++ Sbjct: 220 ERIATPRMALTCAEYLAFEKGMHVLVILTDLTNYCEALREVSAARKEVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L + ER G + ++G+IT + + + D+ PI D I +G I+L+R L ++ Sbjct: 280 DLSTIYERAGKIKGKEGSITQIPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYKQNLM 339 Query: 349 PPVDPLASVSRLADKAWSADEKK 371 PPVD L S+SRL DK ++ + Sbjct: 340 PPVDVLPSLSRLKDKGIGKNKTR 362 >gi|257852934|gb|ACV71478.1| ATP synthase beta subunit [Montrouziera cauliflora] Length = 497 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|161833651|ref|YP_001597847.1| F0F1 ATP synthase subunit beta [Candidatus Sulcia muelleri GWSS] gi|152206140|gb|ABS30450.1| ATP synthase F1, beta subunit [Candidatus Sulcia muelleri GWSS] Length = 500 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 116/373 (31%), Positives = 183/373 (49%), Gaps = 48/373 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N +G IDG LG + S I + + PP TGI+VID+ P Sbjct: 95 GRVFNVVGNTIDG---LGDLNNSKRISIHRNPPKFEYLSTNIDILYTGIKVIDLVEPYIK 151 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VRE--------- 204 G +IG+F G+G+GK+ L+ + +S+ VGER RE +RE Sbjct: 152 GGKIGLFGGAGVGKTVLIQELINNIAKGYGGLSVFAGVGERTREGNDLLREMISSGIIKY 211 Query: 205 ---FIEDYLG----------DNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-- 247 F+ED + LK K+ V +E P R L+ +T+AEY+ Sbjct: 212 GDSFLEDMKNGKWDISKVDKNELKNSKATFVFGQMNEPPGARARVVLSGLTLAEYYRDSF 271 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 KG +VL +D+I RF + E++ G +P A GY ++ SE+ + ERI + + G+ Sbjct: 272 RKGRDVLFFIDNIFRFTQAGSELSALLGRMPSAVGYQPTLASEMGTMQERI--TSTKNGS 329 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ +V + D+ +DP + S LD VL+R ++ G YP VDPL+S SR+ + Sbjct: 330 ITSIQAVYIPADDLSDPAPATTFSHLDATTVLSRKISSLGIYPAVDPLSSTSRILSIEFI 389 Query: 367 ADEKKLVSS-LTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQSPSDL 424 ++ L + + ++ R++E +DI I G + DK VH+ + FL Q P ++ Sbjct: 390 GNDHYLCAQRVKQILQRYQELQDIIAILGIEELSE--EDKIIVHRARRVQRFLSQ-PFNV 446 Query: 425 SSEDVFQEITKKL 437 + + F IT KL Sbjct: 447 AEQ--FTGITGKL 457 >gi|118917322|dbj|BAF40443.1| ATP synthase beta subunit [Elatine triandra] Length = 489 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VIDEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|113910754|gb|ABI48109.1| ATPase beta subunit [Monoclea forsteri] Length = 456 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/320 (30%), Positives = 162/320 (50%), Gaps = 22/320 (6%) Query: 91 GRFRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTG 148 G + GR+ N LG+P+D +LG + + + + PA + + F+TG Sbjct: 58 GPLSVPVGEATLGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETG 114 Query: 149 IRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED 208 I+V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + Sbjct: 115 IKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDL 174 Query: 209 YLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLIL 256 Y+ N+ +S V V +E P R LTA+T+AEYF +VLL + Sbjct: 175 YMEMKESKVINEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFI 234 Query: 257 DSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD 316 D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V Sbjct: 235 DNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVP 292 Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVS 374 D+ DP + + LD VL+R LA +G YP VDPL S S + + W E+ + Sbjct: 293 ADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQ 351 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + + R++E +DI I G Sbjct: 352 GVKQTLQRYKELQDIIAILG 371 >gi|99640685|emb|CAJ45107.1| putative beta subunit of chloroplast ATP synthase [Lygodium japonicum] Length = 493 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 158/315 (50%), Gaps = 26/315 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG +G + I P F+TGI+V+D+ P Sbjct: 105 LGRIFNVLGEPVD---NLGPVEGGTTFPIHRSAPAFTQSDTKLSIFETGIKVVDLLAPYR 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 222 EQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 281 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 282 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPAT 339 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 340 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398 Query: 386 TRDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 399 LQDIIAI----PGLD 409 >gi|14717924|gb|AAK72705.1| ATP synthase beta subunit [Agave ghiesbreghtii] Length = 483 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G V G R+ GR Sbjct: 43 KGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALRVPVGGATLGR 102 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 103 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 159 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 160 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 219 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 220 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 279 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 280 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 337 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 338 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKELQDI 397 Query: 390 RLIGG 394 I G Sbjct: 398 IAILG 402 >gi|14717997|gb|AAK72740.1| ATP synthase beta subunit [Celosia argentea] Length = 483 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ Sbjct: 97 GTTLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 392 KELQDIIAILG 402 >gi|62902815|gb|AAY19322.1| ATP synthase beta subunit [Lepuropetalon spathulatum] Length = 488 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 96 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 152 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 212 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 213 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 272 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 273 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPAP 330 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 331 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 390 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 391 ELQDIIAILG 400 >gi|34582314|sp|Q8MBF7|ATPB_MONCA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21633463|gb|AAM52206.1| ATP synthase beta subunit [Montinia caryophyllacea] Length = 498 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|21633419|gb|AAM52184.1| ATP synthase beta subunit [Dicranostyles villosus] Length = 487 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/315 (31%), Positives = 159/315 (50%), Gaps = 20/315 (6%) Query: 95 ISPSACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVI 152 ++ GR+ N LG+P+D +LG D + I P + F+TGI+V+ Sbjct: 95 VAVGGATLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVV 151 Query: 153 DIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG- 211 D+ P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 152 DLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEM 211 Query: 212 --------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSIT 260 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I Sbjct: 212 KESRMINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIF 271 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 272 RFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDL 329 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHL 379 DP + + LD VL+R LA +G YP VDPL S S + +E + + Sbjct: 330 TDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQT 389 Query: 380 IHRFEETRDIRLIGG 394 + R++E +DI I G Sbjct: 390 LQRYKELQDIIAILG 404 >gi|18075929|emb|CAD11926.1| ATP synthase beta subunit [Escallonia resinosa] Length = 467 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E +G++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 212 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 269 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 270 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 327 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 328 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 387 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 388 QRYKELQDIIAILG 401 >gi|21633303|gb|AAM52126.1| ATP synthase beta subunit [Merremia vitifolia] Length = 486 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 98 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 214 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 215 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 393 KELQDIIAILG 403 >gi|16416745|gb|AAL18396.1|AF313549_1 ATP synthase beta chain [Lygodium japonicum] Length = 395 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 100/315 (31%), Positives = 158/315 (50%), Gaps = 26/315 (8%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG +G + I P F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NLGPVEGGTTFPIHRSAPAFTQSDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGSFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 124 EQNVSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDSTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 301 LQDIIAI----PGLD 311 >gi|62902819|gb|AAY19324.1| ATP synthase beta subunit [Parnassia faberi] Length = 488 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|8452718|emb|CAB89961.2| ATP synthase beta subunit [Parnassia palustris] Length = 490 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFXGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|52788863|gb|AAU87401.1| ATP synthase beta chain [Odontosoria chinensis] Length = 383 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + G + I P + F+TGI+V+D+ P Sbjct: 5 ATLGRIFNVLGEPVDNLGPVESGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 123 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 124 EKNISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAISG 309 >gi|283794975|ref|YP_003359366.1| ATPase beta subunit [Olea europaea] gi|330850750|ref|YP_004376428.1| ATPase beta subunit [Olea europaea subsp. europaea] gi|281428694|gb|ADA69933.1| ATPase beta subunit [Olea europaea] gi|291059260|gb|ADD72096.1| ATP synthase CF1 beta subunit [Olea europaea] gi|328795440|emb|CBR30322.1| ATPase beta subunit [Olea europaea subsp. europaea] Length = 498 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D+ + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDIRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|134093206|ref|YP_001109508.1| ATP synthase CF1 beta subunit [Populus trichocarpa] gi|190358701|sp|A4GYR7|ATPB_POPTR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|133712068|gb|ABO36711.1| ATPase beta subunit [Populus trichocarpa] Length = 498 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D ++ I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---DLGPVDTQITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|18077607|emb|CAD11920.1| ATP synthase beta subunit [Valdivia gayana] Length = 490 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 97 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 212 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E +G++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 213 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 270 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 271 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 328 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 329 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 388 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 389 QRYKELQDIIAILG 402 >gi|18075921|emb|CAD11922.1| ATP synthase beta subunit [Escallonia calcottiae] gi|18075923|emb|CAD11923.1| ATP synthase beta subunit [Escallonia illinita] gi|18075925|emb|CAD11924.1| ATP synthase beta subunit [Escallonia myrtoidea] gi|18075927|emb|CAD11925.1| ATP synthase beta subunit [Escallonia pulverulenta] Length = 490 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 211 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E +G++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 212 GVINEQNIGES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 269 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 270 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 327 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 328 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTL 387 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 388 QRYKELQDIIAILG 401 >gi|46360697|gb|AAS89130.1| ATP synthase beta subunit [Monoclea gottschei subsp. elongata] Length = 382 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR++N LG+P+D +LG + + + + PA + + F+TGI+V+D+ P Sbjct: 2 LGRILNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 296 LQDIIAILG 304 >gi|28188337|gb|AAL92548.1| ATP synthase beta subunit [Coleochaete nitellarum] Length = 400 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 37 ATLGRIFNVLGEPVD---ELGPVDSTITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 93 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 94 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 153 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 154 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 213 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 214 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 271 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W + + + + R+ Sbjct: 272 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYETAQGVKETLQRY 330 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 331 KELQDIIAILG 341 >gi|62902821|gb|AAY19325.1| ATP synthase beta subunit [Parnassia glauca] Length = 488 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|118917354|dbj|BAF40463.1| ATP synthase beta subunit [Trigonopleura malayana] Length = 486 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 160/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D L+ + + PA + + F+TGI+V+D+ P Sbjct: 94 ATLGRIFNVLGEPVD---DLGPVDTLTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 211 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 388 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 389 ELQDIIAILG 398 >gi|7708286|emb|CAB90071.1| ATP synthase beta subunit [Eucryphia milliganii] Length = 490 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYPRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|5758880|gb|AAD50854.1| ATP synthase beta subunit [Eustrephus latifolius] Length = 495 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|28188327|gb|AAL92543.1| ATP synthase beta subunit [Coleochaete pulvinata] Length = 396 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---ELGPVDSTVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W + + + + R++E Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|4063528|gb|AAC98322.1| ATP synthase beta subunit [Berrya javanica] Length = 456 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|305671627|gb|ADM63123.1| ATP synthase beta subunit [Kolkwitzia amabilis] gi|305671635|gb|ADM63127.1| ATP synthase beta subunit [Heptacodium miconioides] Length = 489 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 154/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 211 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 212 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFV 271 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 272 QAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKKGSITSIQAVYVPADDLTDP 329 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + + + + R Sbjct: 330 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGKKHYETAQRVKQTLQR 389 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 390 YKELQDIIAILG 401 >gi|110915568|gb|ABH02572.1| ATP synthase beta subunit [Agrostis tenerrima] Length = 490 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT + +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITXIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|113910830|gb|ABI48147.1| ATPase beta subunit [Hymenophyton flabellatum] Length = 416 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 103/312 (33%), Positives = 161/312 (51%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVP-PAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D P PA + + F+TGI+V+D+ P Sbjct: 58 ATLGRIFNVLGEPVD---NLGPVDTVTTFPIHRPAPAFTQLDTKLSIFETGIKVVDLLAP 114 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 115 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 173 Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + D N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 174 VIDEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQ 233 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 350 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 351 YKELQDIIAILG 362 >gi|37720947|gb|AAN32476.1| ATP synthase beta subunit [Narthecium ossifragum] Length = 489 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 157/313 (50%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPID---NLGPVDTSTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +K+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYM--EMKE 210 Query: 217 S-------------VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262 S +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 SGVINEKNPAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 270 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 271 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 328 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VL+R LA +G YP VDPL S S + +E ++ + Sbjct: 329 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQ 388 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 389 RYKELQDIIAILG 401 >gi|21633321|gb|AAM52135.1| ATP synthase beta subunit [Merremia peltata] Length = 490 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|32815669|gb|AAP88231.1| ATP synthase beta subunit [Celtis philippensis] Length = 457 Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|190358733|sp|A8Z6C7|ATPB_SULMW RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta Length = 496 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 116/373 (31%), Positives = 183/373 (49%), Gaps = 48/373 (12%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N +G IDG LG + S I + + PP TGI+VID+ P Sbjct: 91 GRVFNVVGNTIDG---LGDLNNSKRISIHRNPPKFEYLSTNIDILYTGIKVIDLVEPYIK 147 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VRE--------- 204 G +IG+F G+G+GK+ L+ + +S+ VGER RE +RE Sbjct: 148 GGKIGLFGGAGVGKTVLIQELINNIAKGYGGLSVFAGVGERTREGNDLLREMISSGIIKY 207 Query: 205 ---FIEDYLG----------DNLK--KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-- 247 F+ED + LK K+ V +E P R L+ +T+AEY+ Sbjct: 208 GDSFLEDMKNGKWDISKVDKNELKNSKATFVFGQMNEPPGARARVVLSGLTLAEYYRDSF 267 Query: 248 -KGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGN 306 KG +VL +D+I RF + E++ G +P A GY ++ SE+ + ERI + + G+ Sbjct: 268 RKGRDVLFFIDNIFRFTQAGSELSALLGRMPSAVGYQPTLASEMGTMQERI--TSTKNGS 325 Query: 307 ITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS 366 IT++ +V + D+ +DP + S LD VL+R ++ G YP VDPL+S SR+ + Sbjct: 326 ITSIQAVYIPADDLSDPAPATTFSHLDATTVLSRKISSLGIYPAVDPLSSTSRILSIEFI 385 Query: 367 ADEKKLVSS-LTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQSPSDL 424 ++ L + + ++ R++E +DI I G + DK VH+ + FL Q P ++ Sbjct: 386 GNDHYLCAQRVKQILQRYQELQDIIAILGIEELSE--EDKIIVHRARRVQRFLSQ-PFNV 442 Query: 425 SSEDVFQEITKKL 437 + + F IT KL Sbjct: 443 AEQ--FTGITGKL 453 >gi|110915670|gb|ABH02623.1| ATP synthase beta subunit [Milium vernale] Length = 472 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 79 ATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLAP 135 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 195 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 196 INEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 255 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ ERI ++K G+IT++ +V V D+ DP Sbjct: 256 GSEVSALLGRMPSAVGYQXTLSTEMGSXQERIASTKK--GSITSIQAVYVPADDLTDPAP 313 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R++ Sbjct: 314 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYEIAQRVKETLQRYK 373 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 374 ELQDIIAILG 383 >gi|75326810|sp|Q7H8L9|ATPB_IPOOB RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21633273|gb|AAM52111.1| ATP synthase beta subunit [Turbina corymbosa] gi|21633277|gb|AAM52113.1| ATP synthase beta subunit [Ipomoea obscura] gi|21633293|gb|AAM52121.1| ATP synthase beta subunit [Argyreia splendens] Length = 490 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|21633287|gb|AAM52118.1| ATP synthase beta subunit [Turbina oenotheroides] Length = 490 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|7708536|emb|CAB89951.1| ATP synthase beta subunit [Passiflora coccinea] Length = 470 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID LG D + I P + F+TGI+V+D+ Sbjct: 84 GATLGRIFNVLGEPID---ELGPVDTRTTSSIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+++AEYF +VLL +D+I RF Sbjct: 201 VINEKNITESKVALVYGQMNEPPGARMRVGLTALSMAEYFRDVNKQDVLLFIDNIFRFVQ 260 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKTGSITSIQAVYVPADDLTDPA 318 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + ++ K S+ + R+ Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGSEHYKTAQSVKQTLQRY 378 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 379 KELQDIIAILG 389 >gi|4063556|gb|AAC98336.1| ATP synthase beta subunit [Ochroma pyramidale] Length = 456 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|4206564|gb|AAD11713.1| ATP synthase beta subunit [Cneorum pulverulentum] Length = 475 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P Sbjct: 94 ATLGRIFNVLGEPVD---NLGPIDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAP 150 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 211 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S L + D + + + R++ Sbjct: 329 ATTXAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRYK 388 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 389 ELQDIIAILG 398 >gi|14089649|emb|CAC13409.1| ATP SYNTHASE BETA CHAIN [Mycoplasma pulmonis] Length = 698 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 96/286 (33%), Positives = 152/286 (53%), Gaps = 16/286 (5%) Query: 93 FRISPSACWCGRVINALGKPIDGDDS--LGKGDLSM-EIMSKVPPAMNRQRVEKGFKTGI 149 + I S GR+I+ +G+ +D +GK M E SK + +TGI Sbjct: 286 YSIPISEKLLGRIIDPVGRILDDPTHPLVGKQYAPMIETESKQTEKYKVFPKTQILETGI 345 Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKV-IISLVGERGREVRE 204 +VID+ P+ G + G+ G+G+GK+ L++ F + D V + S +GER RE E Sbjct: 346 KVIDVLLPIPSGGKTGLLGGAGVGKTVVVQELINTFIKHH--DGVSVFSGIGERIREGHE 403 Query: 205 FIEDY--LGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITR 261 E+ LG L K+ + +ESP LR + T V +AEYF + G NVLL +D+I R Sbjct: 404 LWEEAKELG-FLDKTTFIFGQMNESPGLRLRSGFTGVKVAEYFRNNLGKNVLLFMDNIFR 462 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 + + E+++ + P A GY + SE+ +L ERI + G+IT++ ++ + D+ Sbjct: 463 YMQAGSEVSSLLEKTPSAVGYQPMLVSEIGKLQERINSNND--GDITSIQAMYIPADDFT 520 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA 367 DP A + + D I+L+R LA EG YP VDPL S S+L +++ Sbjct: 521 DPAAVAAFAHFDATIILSRQLAAEGLYPAVDPLVSSSKLLSTKFTS 566 >gi|319902315|ref|YP_004162043.1| ATP synthase F1, beta subunit [Bacteroides helcogenes P 36-108] gi|319417346|gb|ADV44457.1| ATP synthase F1, beta subunit [Bacteroides helcogenes P 36-108] Length = 506 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/327 (29%), Positives = 161/327 (49%), Gaps = 45/327 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + + + I + P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKELDR-EGAYPIHREPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQHGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ KKS+ ++ +E P R+ L+ +T+AE F G Sbjct: 210 GEEFKKSMEEGNWDLSKVDYNEVAKSQVALIFGQMNEPPGARQSVALSGLTVAESFRDMG 269 Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 ++L +D+I RF + E++ G LP A GY ++ +E+ + ERI + Sbjct: 270 AETDGPRDILFFIDNIFRFTQAGSEVSALLGRLPSAVGYQPTLATEMGAMQERI--TSTR 327 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 SGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389 E ++ + ++ R +E +DI Sbjct: 388 HIVGREHYEVAQRVKQILQRNKELQDI 414 >gi|260677426|ref|YP_003208194.1| ATP synthase CF1 beta subunit [Coix lacryma-jobi] gi|209361364|gb|ACI43279.1| ATP synthase CF1 beta subunit [Coix lacryma-jobi] Length = 498 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTERGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|123325707|gb|ABM74478.1| ATP synthase beta subunit [Oxanthera sp. V 7758] Length = 461 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|21633323|gb|AAM52136.1| ATP synthase beta subunit [Calystegia macrostegia] Length = 490 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E+ + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGEEQYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|6688706|emb|CAB65227.1| ATP synthase beta subunit [Montinia caryophyllacea] Length = 498 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|8517408|emb|CAB94295.1| ATP synthase beta subunit [Clavija eggersiana] Length = 476 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|62902823|gb|AAY19326.1| ATP synthase beta subunit [Parnassia laxmannii] Length = 473 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKFSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|33327763|gb|AAQ09245.1| ATP synthase beta subunit [Pittosporum verrucosum] Length = 489 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 96 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|6689000|emb|CAB65354.1| ATP synthase beta subunit [Proboscidea louisianica] Length = 498 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRNAPAFIQLDTKFSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|7708313|emb|CAB90088.1| ATP synthase beta subunit [Geum sp. 'Chase 2507 K'] Length = 473 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 89 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 147 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 148 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 207 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 208 NEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 267 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 268 SEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 325 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S L + D + + + R++E Sbjct: 326 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKETLQRYKE 385 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 386 LQDIIAILG 394 >gi|21633317|gb|AAM52133.1| ATP synthase beta subunit [Operculina turpethum] Length = 490 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|15425590|emb|CAC60270.1| ATP synthase beta subunit [Phyllachne uliginosa] Length = 470 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 158/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 77 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 133 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 134 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 193 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 194 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 253 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 254 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 311 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R++ Sbjct: 312 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 371 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 372 ELQDIIAILG 381 >gi|7708576|emb|CAB89978.1| ATP synthase beta subunit [Rhodohypoxis milloides] Length = 493 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF H Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVH 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|14718136|gb|AAK72807.1| ATP synthase beta subunit [Mollugo verticillata] Length = 483 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 158/310 (50%), Gaps = 18/310 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D + G S + + PA + + F+TGI+V+D+ P Sbjct: 97 GATLGRIFNVLGEPVDNLGPVDTGTTSP--IHRSAPAFTQLDTKLSIFETGIKVVDLLAP 154 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 214 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 215 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 274 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 332 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 333 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 392 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 393 ELQDIIAILG 402 >gi|325188722|emb|CCA23253.1| unnamed protein product putative [Albugo laibachii Nc14] Length = 501 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 88/277 (31%), Positives = 147/277 (53%), Gaps = 26/277 (9%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKV---PPAMNRQRVEKG-FKTGIRVIDIFTPL 158 GR++N +G+P+D +G ++ + + + P + Q E TG++V+D+ P Sbjct: 110 GRIMNVIGEPVDE-----RGPINAKHHAPIHASAPLLTEQDSESCVLVTGLKVVDLLAPY 164 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ ++ + + +S+ VGER RE + + + + Sbjct: 165 PKGGKIGLFGGAGVGKTVVIMELINNVANNHGGVSVFAGVGERTREGNDLYYEMIESGVI 224 Query: 215 ----------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 K+ +V +E P R LT +T+AEYF +G +VLL +D+I RF Sbjct: 225 KINEDGTTKGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDVEGQDVLLFVDNIFRFT 284 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ ++L L ERI + +KG+IT+V ++ V D+ DP Sbjct: 285 QACSEVSALLGRIPSAVGYQPTLATDLGALQERI--TSTKKGSITSVQAIYVPADDLTDP 342 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRL 360 + S LD VL+R +AE G YP VDPL S SR+ Sbjct: 343 APATTFSHLDATTVLSRQIAELGIYPAVDPLDSKSRI 379 >gi|325569373|ref|ZP_08145529.1| V-type ATP synthase, subunit B [Enterococcus casseliflavus ATCC 12755] gi|325157373|gb|EGC69534.1| V-type ATP synthase, subunit B [Enterococcus casseliflavus ATCC 12755] Length = 465 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 13/316 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ I D +V I G + + F + S GRV + LG+ DG Sbjct: 42 GQVLEIQEDKALVQIFEGTGGINLRESAVRFLGHPLELGVSEQMIGRVFDGLGRVKDGGV 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + M+I +V R ++ +TGI ID L GQ++ +F+GSG+ L Sbjct: 102 EIVPEKF-MDINGEVINPAARDYPDEFIQTGISSIDHLNTLVRGQKLPIFSGSGLPHKEL 160 Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 S AR D F V+ + +G E F+ED+ + SVV + +++ I Sbjct: 161 ASQIARQAQVLNSEDDF-AVVFAGIGITFEEAEYFMEDFRQTGAIDHSVVFMNLANDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + KG +VL+I+ +T + ++REI++ E+P RGYP +++ Sbjct: 220 ERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISSARREVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 L L ER G KG++T + + + D+ PI D I +G I+L+R L + G Sbjct: 280 NLSTLYERAGRIRGLKGSVTQLPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYKNGIQ 339 Query: 349 PPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 340 PPIDVLPSLSRLKDKG 355 >gi|320100289|ref|YP_004175881.1| H+transporting two-sector ATPase alpha/beta subunit central region [Desulfurococcus mucosus DSM 2162] gi|319752641|gb|ADV64399.1| H+transporting two-sector ATPase alpha/beta subunit central region [Desulfurococcus mucosus DSM 2162] Length = 470 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 94/330 (28%), Positives = 165/330 (50%), Gaps = 23/330 (6%) Query: 58 NLGQVIRINLDIVYICPVGIGEEISL--GDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 LGQVI ++ D I G ++ L + + RI S GRV + LG+PID Sbjct: 45 KLGQVIDVSRDATVIQVFGGVADVDLLKSRVKYRGETLRIPVSIDMLGRVFDGLGRPIDN 104 Query: 116 ------DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAG 169 +D L + S++PP+ + +TGI ID + GQ++ +F+G Sbjct: 105 GPRIVPEDYLDINGAPLNPASRLPPS-------EFIETGISAIDGLFSIVRGQKLPIFSG 157 Query: 170 SGIGKSTLLSMFAR-SDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVAT 223 SG+ + + + R + K ++ + +G + FIE++ + V + Sbjct: 158 SGLPHNRIAAQIVRQARVLGKEEKFAMVFAAIGVPYDDAMFFIENFRRTGALERTVALIN 217 Query: 224 SDESPILRKMA-PLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARG 281 + SP++ ++A P A+TIAE+ + D +VL++L +T + ++RE++ E+P RG Sbjct: 218 TASSPVIERIATPRVALTIAEHLAWTHDMHVLVVLTDMTFYCEALRELSAAREEVPGRRG 277 Query: 282 YPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRS 341 YP ++++L + ER G +KG++T + + + D+ PI D I +G +VL+R Sbjct: 278 YPGYMYTDLATIYERAGRVRGKKGSVTQLPILTMPDDDITHPIPDLTGYITEGQLVLSRQ 337 Query: 342 LAEEGRYPPVDPLASVSRLADKAWSADEKK 371 L +G YPP DPL S+SRL A + + Sbjct: 338 LWMKGIYPPFDPLMSLSRLMKDGIGAGKTR 367 >gi|305671683|gb|ADM63151.1| ATP synthase beta subunit [Platysace lanceolata] Length = 489 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GTTLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|119350541|gb|ABL63221.1| AtpB [Radiofilum conjunctivum] Length = 393 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/308 (32%), Positives = 156/308 (50%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + I P ++ F+TGI+V+D+ P Sbjct: 38 LGRIFNVLGEPVD---NLGPVDAKDGLPIHRSAPAFVDLDTKLSIFETGIKVVDLLAPYR 94 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 154 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 EENLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 214 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 215 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 272 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + D + ++ + R++E Sbjct: 273 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPWIVGDTHYQTAQNVKQTLQRYKEL 332 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 333 QDIIAILG 340 >gi|37543317|gb|AAL92723.1| ATP synthase beta subunit [Coleochaete conchata] Length = 388 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 33 LGRIFNVLGEPVD---ELGPVDSTVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 89 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 90 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 149 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 150 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 209 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 210 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 267 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W + + + + R++E Sbjct: 268 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGQEHYETAQGVKQTLQRYKE 326 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 327 LQDIIAILG 335 >gi|296875441|ref|ZP_06899514.1| V-type ATP synthase, subunit B [Streptococcus parasanguinis ATCC 15912] gi|312866966|ref|ZP_07727177.1| ATP synthase ab C terminal domain protein [Streptococcus parasanguinis F0405] gi|322390615|ref|ZP_08064130.1| V-type ATP synthase, subunit B [Streptococcus parasanguinis ATCC 903] gi|296433508|gb|EFH19282.1| V-type ATP synthase, subunit B [Streptococcus parasanguinis ATCC 15912] gi|311097448|gb|EFQ55681.1| ATP synthase ab C terminal domain protein [Streptococcus parasanguinis F0405] gi|321142694|gb|EFX38157.1| V-type ATP synthase, subunit B [Streptococcus parasanguinis ATCC 903] Length = 461 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 96/334 (28%), Positives = 163/334 (48%), Gaps = 13/334 (3%) Query: 41 QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98 Y L + +H G GQV+ + D +V + G + + F + S Sbjct: 27 HYNELVEIKLHDGTTRQ--GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVS 84 Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N +GKPIDG + + ++I + ++R ++ +TGI ID L Sbjct: 85 EDMVGRIFNGMGKPIDGGPEIIP-EKYLDIDGQAINPVSRDYPDEFIQTGISAIDHLNTL 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212 GQ++ VF+GSG+ L + AR S+ V+ + +G E F+ D Sbjct: 144 VRGQKLPVFSGSGLPHKELAAQIARQATVLNSEENFAVVFAAMGITFEEAEFFMNDLRET 203 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +SV+ + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P RGYP +++ L L ER G +KG++T + + + D+ PI D Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGY 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L+R L G PP++ L S+SRL DK Sbjct: 324 ITEGQIILSRDLYNSGYRPPINVLPSLSRLKDKG 357 >gi|149384457|gb|ABR25051.1| ATP synthase beta chain [Alsophila stelligera] Length = 394 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 8 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 NL +S V V +E P R TA T+AEYF +VLL +D+I RF + E Sbjct: 125 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301 Query: 387 RDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 302 QDIIAI----PGLD 311 >gi|56236580|gb|AAV84657.1| ATP synthase beta subunit [Agathis australis] Length = 410 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D D I P F+TGI+V+D+ P Sbjct: 34 GATLGRIFNVLGEPVD-DLGPVAARAKSPIHRAAPDFTQLDTKFSIFETGIKVVDLLAPY 92 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR--SDCFDKV-IISLVGERGREVREFIEDYLGDNL- 214 G +IG+F G+G+GK+ L+ + V + S VGER RE + + + Sbjct: 93 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFSGVGERTREGNDLYMEMKESGVI 152 Query: 215 -------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSI 266 K +V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 153 QEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAG 212 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 213 SEVSALLGRMPSAVGYQPTLGTEMGCLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 270 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + + +E + + + R++E Sbjct: 271 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGEEHYETAQRVKQTLQRYKE 330 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 331 LQDIIAILG 339 >gi|16943674|emb|CAD10772.1| atp synthase, beta subunit [Eustrephus latifolius] Length = 498 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|21633281|gb|AAM52115.1| ATP synthase beta subunit [Stictocardia tiliifolia] Length = 490 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|6467934|gb|AAF13233.1|AF197600_1 ATPase beta subunit [Potamogeton berchtoldii] Length = 489 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQKVKETLQR 395 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 396 YKELQDIIAILG 407 >gi|91208909|ref|YP_538942.1| ATP synthase CF1 beta subunit [Gossypium hirsutum] gi|325210937|ref|YP_004286011.1| ATP synthase CF1 beta subunit [Gossypium thurberi] gi|118573540|sp|Q2L917|ATPB_GOSHI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|85687423|gb|ABC73635.1| ATP synthase CF1 beta subunit [Gossypium hirsutum] gi|290775799|gb|ADD62295.1| ATP synthase CF1 beta subunit [Gossypium thurberi] Length = 498 Score = 129 bits (324), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|229002314|dbj|BAH57920.1| ATP synthase beta subunit [Potamogeton compressus] gi|229002322|dbj|BAH57924.1| ATP synthase beta subunit [Potamogeton obtusifolius] gi|229002324|dbj|BAH57925.1| ATP synthase beta subunit [Potamogeton octandrus] Length = 491 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQKVKETLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|111283726|gb|ABH09213.1| ATPase beta subunit [Goebelobryum unguiculatum] Length = 449 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 60 ATLGRIFNVLGEPVD---NLGPVDASTTFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAP 116 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 117 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 176 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 177 INEQNISESKVASVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQA 236 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 237 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 294 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDP S S + + W E+ + + + R+ Sbjct: 295 ATTFAHLDATTVLSRGLAAKGIYPAVDPPDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 353 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 354 KELQDIIAILG 364 >gi|37543313|gb|AAL92721.1| ATP synthase beta subunit [Coleochaete pulvinata] Length = 399 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D LG D ++ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---ELGPVDSTVTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W + + + + R++E Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYETAQGVKQTLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|21633335|gb|AAM52142.1| ATP synthase beta subunit [Polymeria pusilla] Length = 490 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIXILG 407 >gi|295398371|ref|ZP_06808411.1| V-type ATP synthase, subunit B [Aerococcus viridans ATCC 11563] gi|294973324|gb|EFG49111.1| V-type ATP synthase, subunit B [Aerococcus viridans ATCC 11563] Length = 460 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 13/317 (4%) Query: 59 LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDGD 116 LGQV+++ + G G I+L D + F S GRV + LG D Sbjct: 41 LGQVLQVEESRAVVQIYGGGSGINLQDTKVRFQGRPLEFGVSEDMIGRVFDGLGNINDNG 100 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 + + S +I + M R ++ +TGI ID L GQ++ VF+GSG+ Sbjct: 101 PEI-IAEESRDINGQAINPMARDYPDEFIQTGISTIDHLNTLVRGQKLPVFSGSGLPHKE 159 Query: 177 LLSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESP 228 L + AR D F V+ + +G E F+E + + +SV+ + +D+ Sbjct: 160 LAAQIARQATVLGDDDQF-AVVFAAMGVTFEEAEYFMESFRETGAIDRSVLFINLADDPS 218 Query: 229 ILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVF 287 I R P A+T AEY + + D VL+I+ +T + ++RE++ E+P RGYP ++ Sbjct: 219 IERLATPKIALTAAEYLAYEKDMQVLVIMTDMTNYCEALREVSAARREVPGRRGYPGYLY 278 Query: 288 SELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGR 347 + L L ER G + KG++T + + + D+ PI D I +G I+L+R L G Sbjct: 279 TNLSTLYERAGRIKGSKGSVTQIPILTMPEDDITHPIPDLTGYITEGQIILDRDLDARGI 338 Query: 348 YPPVDPLASVSRLADKA 364 PP++ L S+SRL DK Sbjct: 339 EPPINVLPSLSRLKDKG 355 >gi|158602283|gb|ABW74608.1| ATP synthase beta subunit [Nigella damascena] Length = 476 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 157/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + + F+TGI+V+D+ Sbjct: 82 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 138 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 139 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 197 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 198 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 257 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 258 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 315 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + D+ + + + R Sbjct: 316 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYETAQRVKQTLQR 375 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 376 YKELQDIIAILG 387 >gi|164597807|ref|NP_084663.2| ATP synthase CF1 beta subunit [Oenothera elata subsp. hookeri] gi|169142844|ref|YP_001687267.1| ATP synthase beta subunit [Oenothera glazioviana] gi|169142929|ref|YP_001687351.1| ATP synthase beta subunit [Oenothera biennis] gi|169143015|ref|YP_001687435.1| ATP synthase beta subunit [Oenothera parviflora] gi|172045790|sp|Q9MTP7|ATPB_OENEH RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358691|sp|B0Z4U4|ATPB_OENBI RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358692|sp|B0Z528|ATPB_OENGL RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|190358693|sp|B0Z5B2|ATPB_OENPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|159793102|gb|ABW98856.1| ATP synthase beta subunit [Oenothera biennis] gi|159895456|gb|ABX10021.1| ATP synthase beta subunit [Oenothera glazioviana] gi|159895541|gb|ABX10105.1| ATP synthase beta subunit [Oenothera parviflora] gi|162423674|emb|CAB67128.2| ATP synthase beta subunit [Oenothera elata subsp. hookeri] Length = 498 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 151/306 (49%), Gaps = 20/306 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF NVLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQNVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKAGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + DE + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDEHYETAQRVKETLQRY 398 Query: 384 EETRDI 389 +E +DI Sbjct: 399 KELQDI 404 >gi|7582352|gb|AAF64291.1| ATP synthase beta subunit [Eustrephus latifolius] Length = 495 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 219 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 220 GVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 279 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 280 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 337 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + + R Sbjct: 338 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|21633313|gb|AAM52131.1| ATP synthase beta subunit [Operculina pteripes] Length = 490 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|20269412|gb|AAM17933.1| ATP synthase beta subunit [Fouquieria sp. Anderberg s.n.] Length = 469 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMAIQESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|7708151|emb|CAB89904.1| ATP synthase beta subunit [Anthericum liliago] Length = 480 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 94 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 152 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 212 Query: 212 --DNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S +V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 213 NEKNIAESKVAIVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 272 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 330 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 331 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 390 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 391 LQDIIAILG 399 >gi|21633309|gb|AAM52129.1| ATP synthase beta subunit [Xenostegia tridentata] Length = 490 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|110456611|gb|ABG74738.1| ATPase beta subunit [Forsythia europaea] Length = 498 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|14718115|gb|AAK72797.1| ATP synthase beta subunit [Limonium arborescens] Length = 472 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 91 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHKSAPDFIQLDTKLSIFETGIKVVDLLA 147 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 148 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 206 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 207 GVINEKNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 266 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 267 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDP 324 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + D+ + + + R Sbjct: 325 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGDKHYETAQRVKETLQR 384 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 385 YKELQDIIAILG 396 >gi|257875183|ref|ZP_05654836.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus EC20] gi|257809349|gb|EEV38169.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus EC20] Length = 465 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 13/316 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ I D +V I G + + F + S GRV + LG+ DG Sbjct: 42 GQVLEIQEDKALVQIFEGTGGINLRESAVRFLGHPLELGVSEQMIGRVFDGLGRVKDGGV 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + M+I +V R ++ +TGI ID L GQ++ +F+GSG+ L Sbjct: 102 EIVPEKF-MDINGEVINPAARDYPDEFIQTGISSIDHLNTLVRGQKLPIFSGSGLPHKEL 160 Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 S AR D F V+ + +G E F+ED+ + SVV + +++ I Sbjct: 161 ASQIARQAQVLNSEDDF-AVVFAGIGITFEEAEYFMEDFRQTGAIDHSVVFMNLANDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + KG +VL+I+ +T + ++REI++ E+P RGYP +++ Sbjct: 220 ERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISSARREVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 L L ER G KG++T + + + D+ PI D I +G I+L+R L + G Sbjct: 280 NLSTLYERAGRIRGLKGSVTQLPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYKNGIQ 339 Query: 349 PPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 340 PPIDVLPSLSRLKDKG 355 >gi|227499460|ref|ZP_03929571.1| H(+)-transporting two-sector ATPase [Anaerococcus tetradius ATCC 35098] gi|227218522|gb|EEI83765.1| H(+)-transporting two-sector ATPase [Anaerococcus tetradius ATCC 35098] Length = 581 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 18/279 (6%) Query: 134 PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIIS 193 P M +EK F+TG RV+D+F PL G + + G G GK+ L A+ D +I Sbjct: 195 PVMANLPIEKLFETGQRVLDVFFPLAKGGTVAIPGGFGTGKTMLQHQLAQYSDVDIIIYI 254 Query: 194 LVGERGREVREFIEDY-------LGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEYF 245 GERG E+ + +E++ G L + +++A + P+ + A + T +T+AEYF Sbjct: 255 GCGERGNEMTQVLEEFPDLIDPNTGKGLMERTILIANTSNMPVAAREASIYTGITMAEYF 314 Query: 246 SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEK--- 302 G +V L+ DS +R+A ++REI+ E+P GYP + S L + ER G Sbjct: 315 RDMGYDVALMADSSSRWAEALREISGRLEEIPAEEGYPAYLGSRLSQFYERAGYFRNLNG 374 Query: 303 EKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 G++T + +V G + ++P+ ++ R ++ + L+R LA YP ++ L S S + Sbjct: 375 SYGSVTLIGAVSPSGGDFSEPVTENTRRCVNVFLGLDRKLAYSRHYPAINWLTSYSNYIE 434 Query: 363 KAWSADEKKL-------VSSLTHLIHRFEETRDIRLIGG 394 K S E++L + L +++ +E R I ++ G Sbjct: 435 KIRSYYEERLGRDIIAVRNELMNVLLEEDEVRSIMMLVG 473 >gi|189170246|gb|ACD80118.1| ATP synthase beta subunit [Tetraselmis suecica] Length = 366 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/309 (32%), Positives = 158/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + I P ++ F+TGI+V+D+ P Sbjct: 21 LGRIFNVLGQPVD---NLGPVDSTNGLTIHRTAPAFVDLDTKLSIFETGIKVVDLLAPYR 77 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 78 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVIQ 137 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 138 ESNLTESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGA 197 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP + Sbjct: 198 EVSALLGRMPSAVGYQPTLATEMGGLQERI--TSTKDGSITSIQAVYVPADDLTDPAPAT 255 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKL--VSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ ++ + R++E Sbjct: 256 TFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWILGEEHYSCAQNVKETLQRYKE 314 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 315 LQDIIAILG 323 >gi|99640475|emb|CAJ45083.1| putative beta subunit of chloroplast ATP synthase [Culcita macrocarpa] Length = 395 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 107/337 (31%), Positives = 175/337 (51%), Gaps = 31/337 (9%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 8 GRISNVLGEPVD---NLGPVESSATFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVRE-FIEDYLG---- 211 G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++E Sbjct: 65 GGKIGLFGGAGVGKTVLIMESINNIAKAHGGVSVSGGVG-ERTREGNDLYMETKESKVIN 123 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V ++E P R TA T+AEYF +VLL +D+I RF + Sbjct: 124 EQNISESKVALVYGQTNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHLDATTVLSRGLAAKGTYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 +DI I PG+D + ++ V + I FL Q Sbjct: 301 PQDIIAI----PGLDELSEEDRLTVARARKIERFLSQ 333 >gi|21633275|gb|AAM52112.1| ATP synthase beta subunit [Turbina corymbosa] Length = 490 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|21633319|gb|AAM52134.1| ATP synthase beta subunit [Merremia umbellata] Length = 490 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|6687483|emb|CAB64952.1| ATP synthase beta subunit [Exacum affine] Length = 498 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 179/365 (49%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + ++ G V G + GR Sbjct: 50 KGRDTLGQSINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|7708474|emb|CAB89923.1| ATP synthase beta subunit [Lavandula bipinnata] Length = 483 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 99 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 394 KELQDIIAILG 404 >gi|7708616|emb|CAB89980.1| ATP synthase beta subunit [Rheum pinchonii] Length = 484 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 212 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S L + K+ + + R+ Sbjct: 330 PATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEAHYKIAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|332707648|ref|ZP_08427676.1| ATP synthase F1 subcomplex beta subunit [Lyngbya majuscula 3L] gi|332353557|gb|EGJ33069.1| ATP synthase F1 subcomplex beta subunit [Lyngbya majuscula 3L] Length = 482 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 95/308 (30%), Positives = 155/308 (50%), Gaps = 16/308 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + + + I P + F+TGI+VID+ TP Sbjct: 95 ATLGRIFNVLGEPVD-NRGPAESEERFPIHRPAPKLTELETKPSVFETGIKVIDLLTPYR 153 Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR---SDCFDKVIISLVGERGREVREFIEDYL------ 210 G +IG+F G+G+GK+ ++ + + VGER RE + + + Sbjct: 154 RGGKIGLFGGAGVGKTVIMMELINNIATKHGGVSVFGGVGERTREGNDLYNEMMESKVIN 213 Query: 211 GDNLKKS--VVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 D+L +S +V +E P R L+A+T+AEYF +VLL +D+I RF + Sbjct: 214 PDDLNESKIALVYGQMNEPPGARMRVGLSALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 273 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +++ L ERI + +G+IT++ +V V D+ DP + Sbjct: 274 EVSALLGRMPSAVGYQPTLGTDVGALQERI--TSTNEGSITSIQAVYVPADDLTDPAPAT 331 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW-SADEKKLVSSLTHLIHRFEET 386 + LDG VL+R LA +G YP VDPL S S + + D ++ + R++E Sbjct: 332 TFAHLDGTTVLSRGLASKGIYPAVDPLDSNSTMLQPSIVGEDHYGTARAVQATLQRYKEL 391 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 392 QDIIAILG 399 >gi|320454976|dbj|BAJ65631.1| ATP synthase beta subunit [Metzgeria americana] Length = 492 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 18/309 (5%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D + G + I P F+TGI+V+D+ P Sbjct: 103 ATLGRIFNVLGEPVDDLGPVNAGT-TFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 161 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 221 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 222 EKNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLLFIDNIFRFVQAGS 281 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 282 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 339 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 340 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|170178344|gb|ACB10591.1| ATP synthase beta subunit [Cornus disciflora] Length = 455 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D GQ I + ++ V + E ++ G V G + GR Sbjct: 11 KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70 Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D ++ I P + F+TGI+V+D+ P G Sbjct: 71 IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 127 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 128 KIGLFGGAGVGKTVLIMKLINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 187 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 188 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 247 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 248 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 305 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 306 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 365 Query: 390 RLIGG 394 I G Sbjct: 366 IAILG 370 >gi|123325613|gb|ABM74431.1| ATP synthase beta subunit [Citrus halimii] gi|123325635|gb|ABM74442.1| ATP synthase beta subunit [x Citrofortunella microcarpa] gi|123325659|gb|ABM74454.1| ATP synthase beta subunit [Limonia acidissima] gi|123325693|gb|ABM74471.1| ATP synthase beta subunit [Microcitrus papuana] Length = 461 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|123325583|gb|ABM74416.1| ATP synthase beta subunit [Bergera koenigii] gi|123325655|gb|ABM74452.1| ATP synthase beta subunit [Clausena harmandiana] Length = 466 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQGVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|110456643|gb|ABG74762.1| ATPase beta subunit [Jasminum leratii] Length = 498 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G ++G+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E K+ + + R+ Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|167040974|ref|YP_001663959.1| V-type ATP synthase subunit B [Thermoanaerobacter sp. X514] gi|300913815|ref|ZP_07131132.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermoanaerobacter sp. X561] gi|307725499|ref|YP_003905250.1| H+transporting two-sector ATPase alpha/beta subunit [Thermoanaerobacter sp. X513] gi|238687614|sp|B0K5I9|VATB_THEPX RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|166855214|gb|ABY93623.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region [Thermoanaerobacter sp. X514] gi|300890500|gb|EFK85645.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermoanaerobacter sp. X561] gi|307582560|gb|ADN55959.1| H+transporting two-sector ATPase alpha/beta subunit central region [Thermoanaerobacter sp. X513] Length = 459 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 101/365 (27%), Positives = 174/365 (47%), Gaps = 26/365 (7%) Query: 50 VHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVIN 107 + G GQV+ +N D +V + G I+ + F + S GRV + Sbjct: 32 IETGSGEIRRGQVLEVNGDKALVQLFEGSTGLNINDCKVRFVGKSIELGVSIDMLGRVFD 91 Query: 108 ALGKPIDGDDSLGKGDL-----SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 LG+P D KG + ++I R + +TGI ID L GQ Sbjct: 92 GLGRPRD------KGPMIIPEKRLDINGNPINPTARDYPSEFIQTGISAIDGLNTLVRGQ 145 Query: 163 RIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGDN-LK 215 ++ +F+GSG+ + L + AR +D V+ + +G E FI D+ + Sbjct: 146 KLPIFSGSGLPHAQLAAQIARQAKVLGTDSKFAVVFAAMGITFEEADYFISDFRRTGAID 205 Query: 216 KSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSG 274 ++V+ + +++ I R P A+T AE+ + K +VL+I+ +T + ++RE++ Sbjct: 206 RTVLFINLANDPAIERIATPRMALTCAEFLAYEKEMHVLVIMTDMTNYCEALREVSAARK 265 Query: 275 ELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDG 334 E+P RGYP ++++L + ER G + KG+IT + + + D+ PI D I +G Sbjct: 266 EVPGRRGYPGYLYTDLATIYERAGRIKGRKGSITQIPILTMPEDDKTHPIPDLTGYITEG 325 Query: 335 HIVLNRSLAEEGRYPPVDPLASVSRLADKAWSA-----DEKKLVSSLTHLIHRFEETRDI 389 I+L+R L +G YPP+D L S+SRL DK D L++ L R ++ +++ Sbjct: 326 QIILSRDLYRKGIYPPIDVLPSLSRLKDKGIGQGKTREDHADLMNQLFASYARGKQAKEL 385 Query: 390 RLIGG 394 +I G Sbjct: 386 AVILG 390 >gi|33318657|gb|AAQ05212.1| ATP synthase beta subunit [Cedrus deodara] Length = 473 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 26/318 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPVD---NLGPVDARVTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 199 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 200 VINEQNIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 317 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + D VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 318 PATTFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 376 Query: 383 FEETRDIRLIGGYRPGVD 400 ++E +DI I PG+D Sbjct: 377 YKELQDIIAI----PGLD 390 >gi|19033067|gb|AAL83518.1|AF408790_1 ATP synthase beta subunit [Coleochaete irregularis] Length = 402 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLS-MEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D S + + + PA + + F+TGI+ +D+ P Sbjct: 38 ATLGRIFNVLGEPVD---ELGPVDTSKVSPIHRPAPAFTQLDTKLSIFETGIKAVDLLAP 94 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 95 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESIV 154 Query: 211 --GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 DNL +S V V + P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 155 INSDNLSESKVALVYGQMNVPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 214 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 215 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 272 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 273 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQRY 331 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 332 KELQDIIAILG 342 >gi|9799486|gb|AAF98993.1| ATP synthase beta subunit [Paeonia californica] Length = 491 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DN+GQ I + ++ V + + + G V G + GR Sbjct: 46 KGQDNIGQPINVTCEVQQLLGNNRVRTVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 105 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 106 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 162 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 163 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 222 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 223 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 282 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 283 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 340 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 341 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 400 Query: 390 RLIGG 394 I G Sbjct: 401 IAILG 405 >gi|75332769|sp|Q95FL8|ATPB_POPTM RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|14718189|gb|AAK72833.1| ATP synthase beta subunit [Populus tremuloides] Length = 498 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 104 GATLGRIFNVLGEPVDDLRPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 223 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|21633279|gb|AAM52114.1| ATP synthase beta subunit [Lepistemon owariensis] Length = 490 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|323715476|gb|ADY04806.1| ATP synthase beta subunit [Hydrangea bretschneideri] Length = 485 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 93 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 151 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 211 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 212 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 271 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 329 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 330 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 389 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 390 LQDIIAILG 398 >gi|270313037|gb|ACZ73600.1| ATP synthase beta subunit [Harrisonia abyssinica] Length = 463 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|257865569|ref|ZP_05645222.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus EC30] gi|257871906|ref|ZP_05651559.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus EC10] gi|257799503|gb|EEV28555.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus EC30] gi|257806070|gb|EEV34892.1| sodium-transporting two-sector ATPase [Enterococcus casseliflavus EC10] Length = 465 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/316 (31%), Positives = 155/316 (49%), Gaps = 13/316 (4%) Query: 60 GQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDD 117 GQV+ I D +V I G + + F + S GRV + LG+ DG Sbjct: 42 GQVLEIQEDKALVQIFEGTGGINLRESAVRFLGHPLELGVSEQMIGRVFDGLGRVKDGGV 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + M+I +V R ++ +TGI ID L GQ++ +F+GSG+ L Sbjct: 102 EIVPEKF-MDINGEVINPAARDYPDEFIQTGISSIDHLNTLVRGQKLPIFSGSGLPHKEL 160 Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 S AR D F V+ + +G E F+ED+ + SVV + +++ I Sbjct: 161 ASQIARQAKVLNSEDDF-AVVFAGIGITFEEAEYFMEDFRQTGAIDHSVVFMNLANDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AEY + KG +VL+I+ +T + ++REI++ E+P RGYP +++ Sbjct: 220 ERIATPRMALTAAEYLAYEKGMHVLVIMTDMTNYCEALREISSARREVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 L L ER G KG++T + + + D+ PI D I +G I+L+R L + G Sbjct: 280 NLSTLYERAGRIRGLKGSVTQLPILTMPEDDKTHPIPDLTGYITEGQIILSRDLYKNGIQ 339 Query: 349 PPVDPLASVSRLADKA 364 PP+D L S+SRL DK Sbjct: 340 PPIDVLPSLSRLKDKG 355 >gi|212896660|gb|ACJ38533.1| membrane-bound ATP synthase subunit B [Clitoria ternatea] Length = 468 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGK--GDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 87 GATLGRIFNVLGEPID---NLGPVDTDTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 143 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 144 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 203 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 204 VINEENIVESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 263 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 264 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 321 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 322 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 381 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 382 KELQDIIAILG 392 >gi|219552242|gb|ACL26836.1| ATP synthase beta chain [Phyllanthus debilis] Length = 423 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 85 ATLGRIFNVLGEPVD---ELGPVDTRTTSAIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 380 ELQDIIAILG 389 >gi|46391135|gb|AAS90662.1| putative ATP synthase beta chain [Oryza sativa Japonica Group] gi|53981744|gb|AAV25021.1| putative ATP synthase beta chain [Oryza sativa Japonica Group] Length = 398 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 156/312 (50%), Gaps = 20/312 (6%) Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 S GR+ N LG+P+D +LG D S I P + F+ GI+V+D+ Sbjct: 25 SGATLGRIFNVLGEPVD---NLGPVDTSATFPIHRSAPAFIELDTKLSIFENGIKVVDLL 81 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 82 APYRRGGKIGLFGGAGVGKTGLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKES 141 Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 NL++S V V +E P R LTA+T+AEYF +VLL +++I RF Sbjct: 142 GVINEKNLEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFINNIFRFV 201 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 202 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDP 259 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + + R Sbjct: 260 APATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKQTLQR 319 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 320 YKELQDIIAILG 331 >gi|6689564|emb|CAB65488.1| ATP synthase beta subunit [Vahlia capensis] Length = 498 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104 K D +GQ I + ++ V + + ++ G V G P GR Sbjct: 50 KGRDTVGQTINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAALSVPVGGATLGR 109 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 110 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 166 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +N Sbjct: 167 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 226 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 227 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 286 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 287 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 344 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 345 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 404 Query: 390 RLIGG 394 I G Sbjct: 405 IAILG 409 >gi|52788846|gb|AAU87393.1| ATP synthase beta chain [Lophosoria quadripinnata] gi|99640603|emb|CAJ45109.1| putative beta subunit of chloroplast ATP synthase [Lophosoria quadripinnata] Length = 383 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 26/314 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S+ + + PA + + F+TGI+V+D+ P Sbjct: 8 GRISNVLGEPVD---NLGPVESSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R TA T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301 Query: 387 RDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 302 QDIIAI----PGLD 311 >gi|18077573|emb|CAC88856.1| atpD beta synthase chain [Pseudomonas tolaasii] Length = 258 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 23 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHCGYSVFAGVGERTRE 82 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 83 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 200 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242 >gi|123325629|gb|ABM74439.1| ATP synthase beta subunit [Citrus limon] gi|123325651|gb|ABM74450.1| ATP synthase beta subunit [Citrus sinensis] Length = 463 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|195183501|dbj|BAG66964.1| ATP synthase beta subunit [Hybanthus calceolaria] Length = 489 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYETAQKVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|119368024|dbj|BAF40515.1| ATP synthase beta subunit [Scagea oligostemon] Length = 489 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLEIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARS---DCFDKVIISLVGERGREVREFIEDYL--- 210 P G +IG+F G+G+GK+ L+ + + + VGER RE + ++ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKEHGGVSVFGGVGERTREGNDLYKEMKESG 212 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + E + S+ + R+ Sbjct: 331 PATTFAHLDATTVLSRPLAVKGIYPAVDPLDSTSTMLQSNIVGKEHYETAQSVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|14718140|gb|AAK72809.1| ATP synthase beta subunit [Moringa oleifera] Length = 479 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 93 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 149 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 210 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 388 KELQDIIAILG 398 >gi|319945902|ref|ZP_08020152.1| V-type ATP synthase, subunit B [Streptococcus australis ATCC 700641] gi|319747967|gb|EFW00211.1| V-type ATP synthase, subunit B [Streptococcus australis ATCC 700641] Length = 465 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 96/334 (28%), Positives = 163/334 (48%), Gaps = 13/334 (3%) Query: 41 QYVCLGDFVVHQGKNSDNLGQVIRINLD--IVYICPVGIGEEISLGDLVFHWGRFRISPS 98 Y L + +H G GQV+ + D +V + G + + F + S Sbjct: 27 HYNELVEIKLHDGTTRQ--GQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVS 84 Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N +GKPIDG + + ++I + ++R ++ +TGI ID L Sbjct: 85 EDMVGRIFNGMGKPIDGGPEIIP-EKYLDIDGQAINPVSRDYPDEFIQTGISAIDHLNTL 143 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYLGD 212 GQ++ VF+GSG+ L + AR S+ V+ + +G E F+ D Sbjct: 144 VRGQKLPVFSGSGLPHKELAAQIARQATVLNSEENFAVVFAAMGITFEEAEFFMNDLRET 203 Query: 213 N-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +SV+ + +++ I R P A+T AEY + + D +VL+I+ +T + ++RE++ Sbjct: 204 GAIDRSVLFINLANDPAIERIATPRIALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 E+P RGYP +++ L L ER G +KG++T + + + D+ PI D Sbjct: 264 AARREVPGRRGYPGYLYTNLSTLYERAGRLVGKKGSVTQIPILSMPEDDITHPIPDLTGY 323 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L+R L G PP++ L S+SRL DK Sbjct: 324 ITEGQIILSRDLYNSGYRPPINVLPSLSRLKDKG 357 >gi|306996343|gb|ADN21391.1| ATP synthase beta subunit [Rhizobium gallicum] Length = 378 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 159/307 (51%), Gaps = 19/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N +G+P+D L S + + P+ Q E TGI+V+D+ P Sbjct: 50 LGRIMNVIGEPVDEAGPLVTA--SKRAIHQDAPSYVEQSTEAQILVTGIKVVDLLAPYAK 107 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 108 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNK 166 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 + G K+ +V +E P R LT +T+AE F +G +VL +D+I RF + E Sbjct: 167 HGGGEGSKAALVYGQMNEPPGARARVALTGLTVAENFRDQGQDVLFFVDNIFRFTQAGSE 226 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ ++ ERI + G+IT+V ++ V D+ DP + Sbjct: 227 VSALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATS 284 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ + Sbjct: 285 FAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQ 344 Query: 388 DIRLIGG 394 DI I G Sbjct: 345 DIIAILG 351 >gi|61968205|gb|AAX57029.1| ATP synthase beta subunit [Andrachne ovalis] Length = 479 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 92 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 209 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYEIAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|21633343|gb|AAM52146.1| ATP synthase beta subunit [Iseia luxurians] Length = 490 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|7708628|emb|CAB89991.1| ATP synthase beta subunit [Saintpaulia ionantha] Length = 483 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|21633269|gb|AAM52109.1| ATP synthase beta subunit [Astripomoea grantii] Length = 490 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|21633337|gb|AAM52143.1| ATP synthase beta subunit [Aniseia martinicensis] Length = 490 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSXFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|242620112|ref|YP_003002116.1| ATP synthase CF1 beta chain [Aureococcus anophagefferens] gi|239997357|gb|ACS36880.1| ATP synthase CF1 beta chain [Aureococcus anophagefferens] Length = 475 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 A GR+ N LG+P+D +G D S + I P + F+TGI+V+D+ Sbjct: 88 APTLGRIFNILGQPVD---EMGPVDSSETLPIHRDAPAFTELETKPSVFETGIKVVDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204 Query: 212 ----DNLKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +NL +S V + +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 205 VINENNLPESKVALCYGQMNEPPGARMRIGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 264 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLATEMGALQERI--TSTTQGSITSIQAVYVPADDLTDPA 322 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S + D ++ ++ ++ Sbjct: 323 PATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPEIVGDTHYDTAQNVKKILQKY 382 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 383 KELQDIIAILG 393 >gi|229002316|dbj|BAH57921.1| ATP synthase beta subunit [Potamogeton oxyphyllus] gi|229002318|dbj|BAH57922.1| ATP synthase beta subunit [Potamogeton pusillus] gi|229002320|dbj|BAH57923.1| ATP synthase beta subunit [Potamogeton pusillus] gi|229002326|dbj|BAH57926.1| ATP synthase beta subunit [Potamogeton cristatus] Length = 491 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQKVKETLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|218884309|ref|YP_002428691.1| V-type ATP synthase subunit B [Desulfurococcus kamchatkensis 1221n] gi|218765925|gb|ACL11324.1| V-type ATPase subunit B [Desulfurococcus kamchatkensis 1221n] Length = 467 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 104/364 (28%), Positives = 179/364 (49%), Gaps = 37/364 (10%) Query: 16 SKNLVVQGG--YISSITSVYYTVTCLSQYVCLGDFVVHQGKNSD-NLGQVIRINLDIVYI 72 SK L QGG + +I V Y G+ V S+ LGQVI ++ + I Sbjct: 11 SKLLKAQGGLLFAETIPGVTY-----------GEIVEVTLPTSEVKLGQVIDVSKGVTVI 59 Query: 73 CPVGIGEEISLGD--LVFHWGRFRISPSACWCGRVINALGKPIDG------DDSLGKGDL 124 G ++ L + + +I S GR+ + LG+PIDG +D L Sbjct: 60 QVFGGVADVDLSRSRVKYRGETLKIPVSIDMLGRIFDGLGRPIDGGPRIIPEDYLDINGA 119 Query: 125 SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFAR- 183 + S++PP+ + +TGI ID + GQ++ +F+GSG+ + + + R Sbjct: 120 PLNPASRLPPS-------EFIETGISAIDGLFSIVRGQKLPIFSGSGLPHNRIAAQIVRQ 172 Query: 184 SDCFDK-----VIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMA-PLT 237 + K ++ + +G + FI+++ + V + + SP++ ++A P Sbjct: 173 ARVLGKEEKFAIVFAAIGVPYDDAMFFIDNFKKTGALERTVALINTASSPVIERIATPRV 232 Query: 238 AVTIAEYFSSKGD-NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLER 296 A+TIAE+ + D +VL+IL +T + ++RE++ E+P RGYP ++++L + ER Sbjct: 233 ALTIAEHLAWTHDMHVLVILTDMTFYCEALRELSAAREEVPGRRGYPGYMYTDLATIYER 292 Query: 297 IGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLAS 356 G +KG+IT + + + D+ PI D I +G +VL+R L +G YPP DPL S Sbjct: 293 AGRVHSKKGSITQLPILTMPDDDITHPIPDLTGYITEGQLVLSRQLWLKGIYPPFDPLMS 352 Query: 357 VSRL 360 +SRL Sbjct: 353 LSRL 356 >gi|7708260|emb|CAB90054.1| ATP synthase beta subunit [Cobaea scandens] Length = 484 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPVD---NLGPVDNRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|75330506|sp|Q8MBQ1|ATPB_IPOAQ RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21633257|gb|AAM52103.1| ATP synthase beta subunit [Ipomoea aquatica] Length = 490 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|28188341|gb|AAL92550.1| ATP synthase beta subunit [Coleochaete sp. 528a3] Length = 385 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + + + PA + + F+TGI+V+D+ P Sbjct: 31 ATLGRIFNVLGEPVD---ELGPVDSTTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 87 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 88 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 147 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 148 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 207 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 208 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 265 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W + + + + R+ Sbjct: 266 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGKEHYETAQGVKQTLQRY 324 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 325 KELQDIIAILG 335 >gi|15425580|emb|CAC60328.1| ATP synthase beta subunit [Forstera bellidifolia] Length = 495 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 101 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 157 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 158 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 217 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 218 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 277 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 278 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 335 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 336 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 395 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 396 KELQDIIAILG 406 >gi|75336618|sp|Q9MU26|ATPB_NYMOD RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|7688029|emb|CAB89719.1| ATP synthase beta subunit [Nymphaea odorata] Length = 498 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + + PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|4995848|emb|CAB44291.1| H(+)-transporting ATP synthase [Thomasia solanacea] Length = 483 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+PID +LG D + + K PA + + F+TGI+V+D+ Sbjct: 92 GSTLGRIFNVLGEPID---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 148 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 149 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 208 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 209 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 268 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 269 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 326 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 327 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 386 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 387 KELQDIIAILG 397 >gi|4063564|gb|AAC98340.1| ATP synthase beta subunit [Schinus molle] Length = 456 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 177/365 (48%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G V G + GR Sbjct: 24 KGRDTVGQTINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 83 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P G Sbjct: 84 IFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 140 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 200 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 201 ISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 319 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|52788827|gb|AAU87386.1| ATP synthase beta chain [Azolla filiculoides] Length = 383 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 162/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D ++G + S++ + + PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NMGPVESSIKFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 124 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLPFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSALSGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDSTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R A +G YP VDPL S S + + W A+ + + + R++E Sbjct: 242 TFAHLDATTVLSRGSAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAILG 309 >gi|11583|emb|CAA25114.1| ATPase, beta subunit [Hordeum vulgare] Length = 498 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D I RF Sbjct: 221 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDDIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|18077565|emb|CAC88852.1| atpD beta synthase chain [Pseudomonas mendocina] Length = 258 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 79/222 (35%), Positives = 123/222 (55%), Gaps = 6/222 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 23 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G +VLL +D+I Sbjct: 83 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGRDVLLFVDNIY 142 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + +KG+IT++ +V V D+ Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKKGSITSIQAVYVPADDL 200 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242 >gi|305671639|gb|ADM63129.1| ATP synthase beta subunit [Citronella suaveolens] Length = 489 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 96 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 154 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 214 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 215 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 274 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 332 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 333 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRYKE 392 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 393 LQDIIAILG 401 >gi|219552260|gb|ACL26845.1| ATP synthase beta chain [Phyllanthus ussuriensis] Length = 423 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGR 104 K D +GQ I + ++ V + E ++ G V G P GR Sbjct: 30 KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVIDTGAALSVPVGGATLGR 89 Query: 105 VINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D LG + + I P + F+TGI+V+D+ P G Sbjct: 90 IFNVLGEPVD---ELGPVETRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +N Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 206 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 207 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYKELQDI 384 Query: 390 RLIGG 394 I G Sbjct: 385 IAILG 389 >gi|8439268|emb|CAB90043.3| ATP synthase beta subunit [Chrysosplenium iowense] Length = 497 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 106/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDIVYICPVGIGEEISLG---------DLVFHWGRFRISPSACWCGR 104 K D LGQ I + ++ + +++ D++ + GR Sbjct: 49 KGRDTLGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMDVIDTGAALSVPVGGVTLGR 108 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 109 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 165 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 166 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 225 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 226 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 285 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 286 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 343 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 344 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 403 Query: 390 RLIGG 394 I G Sbjct: 404 IAILG 408 >gi|5001583|gb|AAD37038.1|AF092112_1 ATP synthase beta subunit [Cercidiphyllum japonicum] Length = 480 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIXRSAPAFIQLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 203 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 380 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 381 KELQDIIAILG 391 >gi|306996339|gb|ADN21389.1| ATP synthase beta subunit [Rhizobium endophyticum CCGE 2052] Length = 378 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/307 (31%), Positives = 159/307 (51%), Gaps = 19/307 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR++N +G+P+D L S + + P+ Q E TGI+V+D+ P Sbjct: 50 LGRIMNVIGEPVDEAGPLVTA--SKRAIHQDAPSYVEQSTEAQILVTGIKVVDLLAPYAR 107 Query: 161 GQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIED---- 208 G +IG+F G+G+GK+ L+ + A++ V VGER RE E IE Sbjct: 108 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVNK 166 Query: 209 YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIRE 268 + G K+ +V +E P R LT +T+AE F +G +VL +D+I RF + E Sbjct: 167 HGGGEGSKAALVYGQMNEPPGARARVALTGLTVAENFRDQGQDVLFFVDNIFRFTQAGSE 226 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +++ ++ ERI + G+IT+V ++ V D+ DP + Sbjct: 227 VSALLGRIPSAVGYQPTLATDMGQMQERI--TTTTTGSITSVQAIYVPADDLTDPAPATS 284 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETR 387 + LD VL+RS+AE+G YP VDPL S SR+ D +E ++ + + R++ + Sbjct: 285 FAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYEVARKVQSTLQRYKALQ 344 Query: 388 DIRLIGG 394 DI I G Sbjct: 345 DIIAILG 351 >gi|305671657|gb|ADM63138.1| ATP synthase beta subunit [Mackinlaya confusa] Length = 489 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSM--EIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 96 GTTLGRIFNVLGEPVD---NLGPVDTSTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|265763727|ref|ZP_06092295.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_16] gi|263256335|gb|EEZ27681.1| ATP synthase F1, beta subunit [Bacteroides sp. 2_1_16] Length = 505 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + D + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKELNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ K+S+ +V +E P R L+ +T+AE F G Sbjct: 210 GEAFKESMEKGHWDLSKVDYNEVEKSQATLVFGQMNEPPGARASVALSGLTVAESFRDMG 269 Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + + Sbjct: 270 AKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKT 327 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPH 387 Query: 365 WSADEKKLVSS-LTHLIHRFEETRDI 389 E V+ + ++ R +E +DI Sbjct: 388 IVGQEHYDVAQRVKQILQRNKELQDI 413 >gi|6687481|emb|CAB64951.1| ATP synthase beta subunit [Euthystachys abbreviata] Length = 498 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|7708546|emb|CAB89971.1| ATP synthase beta subunit [Platytheca verticillata] Length = 474 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 83 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 199 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 200 VINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 259 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 317 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 318 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 377 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 378 KELQDIIAILG 388 >gi|2655153|gb|AAB87886.1| ATP synthase beta subunit [Drosophila pseudoobscura] Length = 323 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 88/260 (33%), Positives = 139/260 (53%), Gaps = 16/260 (6%) Query: 148 GIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE-- 201 GI+++D+ P G +IG+F G+G+GK+ L+ + A++ V VGER RE Sbjct: 1 GIKLVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGN 59 Query: 202 --VREFIED---YLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLI 255 E IE L D K +V +E P R LT +T+AEYF +G +VLL Sbjct: 60 DLYNEMIEGGVISLKDKTSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLF 119 Query: 256 LDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLV 315 +D+I RF + E++ G +P A GY ++ +++ + ERI + +KG+IT+V ++ V Sbjct: 120 IDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERI--TTTKKGSITSVQAIYV 177 Query: 316 DGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS- 374 D+ DP + + LD VL+R++AE G YP VDPL S SR+ D E V+ Sbjct: 178 PADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGQEHYNVAR 237 Query: 375 SLTHLIHRFEETRDIRLIGG 394 + ++ ++ +DI I G Sbjct: 238 GVQKILQDYKSLQDIIAILG 257 >gi|123325653|gb|ABM74451.1| ATP synthase beta subunit [Citrus tachibana] gi|123325689|gb|ABM74469.1| ATP synthase beta subunit [Microcitrus garrowayae] Length = 462 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|124360831|gb|ABN08803.1| H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, delta/epsilon subunit [Medicago truncatula] Length = 614 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 108/370 (29%), Positives = 178/370 (48%), Gaps = 27/370 (7%) Query: 47 DFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISP 97 + ++ QG+ D +GQ I + ++ V + + + G +V + G + Sbjct: 45 NALIVQGR--DTVGQEINVTCEVQQLLGNNRVRAVAMSATDGLKRGMVVINTGAPLSVPV 102 Query: 98 SACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID + G S I P + F+TGI+V+D+ P Sbjct: 103 GGATLGRIFNVLGEPIDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLGTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 340 ATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 399 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 400 ELQDIIAILG 409 >gi|4995759|emb|CAB44244.1| H(+)-transporting ATP synthase [Neurada procumbens] Length = 484 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 90 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 146 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 206 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 207 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 266 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 267 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 324 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 325 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 384 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 385 KELQDIIAILG 395 >gi|4063538|gb|AAC98327.1| ATP synthase beta subunit [Carica papaya] Length = 456 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKFSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|91208995|ref|YP_538855.1| ATP synthase CF1 beta subunit [Solanum bulbocastanum] gi|118573749|sp|Q2MII0|ATPB_SOLBU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|84371902|gb|ABC56220.1| ATP synthase CF1 beta subunit [Solanum bulbocastanum] Length = 498 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINKENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKDGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|62085175|gb|AAX62992.1| ATP synthase beta subunit [Pera bicolor] Length = 482 Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D LG D + + K PA + + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHKAAPAFIQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 206 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|329962161|ref|ZP_08300170.1| ATP synthase F1, beta subunit [Bacteroides fluxus YIT 12057] gi|328530566|gb|EGF57433.1| ATP synthase F1, beta subunit [Bacteroides fluxus YIT 12057] Length = 506 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/327 (29%), Positives = 160/327 (48%), Gaps = 45/327 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + + I + P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKELDRQG-AYPIHREPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQHGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ KKS+ ++ +E P R+ L+ +T+AE F G Sbjct: 210 GEEFKKSMEAGNWDLSKVDYDEVAKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDMG 269 Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 270 AETDGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389 E ++ + ++ R +E +DI Sbjct: 388 HIVGQEHYEVAQRVKQILQRNKELQDI 414 >gi|89242540|gb|ABD64628.1| ATPase beta subunit [Lamium sp. Qiu 95019] Length = 436 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 57 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 113 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 114 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 173 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 174 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 233 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 234 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 291 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 292 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 351 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 352 KELQDIIAILG 362 >gi|113910904|gb|ABI48184.1| ATPase beta subunit [Heterophyllium affine] Length = 472 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+ +D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|4995798|emb|CAB44271.1| H(+)-transporting ATP synthase [Schoutenia glomerata] Length = 482 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 206 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|21633283|gb|AAM52116.1| ATP synthase beta subunit [Stictocardia incomta] Length = 490 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|113910886|gb|ABI48175.1| ATPase beta subunit [Leucodon julaceus] gi|113910908|gb|ABI48186.1| ATPase beta subunit [Climacium americanum] gi|113910912|gb|ABI48188.1| ATPase beta subunit [Myurium hochstetteri] Length = 472 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+ +D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|75330507|sp|Q8MBQ2|ATPB_IPOWR RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21633255|gb|AAM52102.1| ATP synthase beta subunit [Ipomoea wrightii] Length = 490 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|21633443|gb|AAM52196.1| ATP synthase beta subunit [Tridynamia megalantha] Length = 490 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/313 (31%), Positives = 159/313 (50%), Gaps = 24/313 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LGKP+D +LG K + + I P + F+TGI V+D+ Sbjct: 102 GSTLGRIFNVLGKPVD---NLGPVKTNXTSPIQRSAPAFIQLDTKLSIFETGIXVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKK 216 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +K+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGEXTREGNDLYM--EMKE 216 Query: 217 SVVV----VATS---------DESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRF 262 S V+ +A S +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 217 SGVINEETIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRF 276 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ D Sbjct: 277 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTD 334 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 335 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQ 394 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 395 RYKELQDIIAILG 407 >gi|7708552|emb|CAB89959.1| ATP synthase beta subunit [Plumeria obtusa] Length = 484 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|14717920|gb|AAK72703.1| ATP synthase beta subunit [Abatia parviflora] Length = 471 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|75330508|sp|Q8MBQ3|ATPB_IPOQU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21633253|gb|AAM52101.1| ATP synthase beta subunit [Ipomoea quamoclit] Length = 490 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|30468214|ref|NP_849101.1| ATP synthase CF1 beta subunit [Cyanidioschyzon merolae strain 10D] gi|75328373|sp|Q85FT2|ATPB_CYAME RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|30409314|dbj|BAC76263.1| ATP synthase CF1 beta chain [Cyanidioschyzon merolae strain 10D] Length = 467 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 95/305 (31%), Positives = 154/305 (50%), Gaps = 16/305 (5%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG +D ++ + + I + P + + F+TGI+V+D+ P G Sbjct: 85 GRIFNVLGDCVDNLGTVTRQAVQ-PIHKQAPSFVQLETKPSVFETGIKVVDLLAPYRRGG 143 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLG------DN 213 +IG+F G+G+GK+ L+ + +S+ VGER RE + E+ N Sbjct: 144 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFAGVGERTREGNDLYEEMKASGVIQSQN 203 Query: 214 LKKSVVVV--ATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 L +S V + +E P R LTA+T+AE+F +VLL +D+I RF + E++ Sbjct: 204 LSESKVALCYGQMNEPPGARMRVGLTALTMAEHFRDINKQDVLLFIDNIFRFVQAGSEVS 263 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + G+IT++ +V V D+ DP + + Sbjct: 264 ALLGRMPSAVGYQPTLATEMGALQERI--TSTVDGSITSIQAVYVPADDLTDPAPATTFA 321 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + + + S + + R++E +DI Sbjct: 322 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPNIVGEAHYQTASRVKQTLQRYKELQDI 381 Query: 390 RLIGG 394 I G Sbjct: 382 IAILG 386 >gi|290490158|gb|ADD31486.1| ATP synthase CF1 beta subunit protein [Nerium oleander] Length = 495 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDSRTTSPIHRSAPAFVQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|123325627|gb|ABM74438.1| ATP synthase beta subunit [Citrus latipes] Length = 457 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|61968293|gb|AAX57073.1| ATP synthase beta subunit [Phyllanthus nummulariifolius] gi|61968295|gb|AAX57074.1| ATP synthase beta subunit [Phyllanthus nummulariifolius] Length = 479 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 387 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 388 ELQDIIAILG 397 >gi|56675703|emb|CAB65474.2| ATP synthase beta subunit [Titanotrichum oldhamii] Length = 496 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|12004113|gb|AAG43896.1|AF213765_1 ATP synthase beta subunit [Grammadenia sp. Stahl 1579] Length = 477 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|75326812|sp|Q7H8M1|ATPB_IPOSE RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|21633259|gb|AAM52104.1| ATP synthase beta subunit [Ipomoea setosa] gi|21633261|gb|AAM52105.1| ATP synthase beta subunit [Ipomoea arborescens] Length = 490 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|21684895|emb|CAD11574.1| ATP synthase beta subunit [Trithuria submersa] Length = 492 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 157/306 (51%), Gaps = 20/306 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + ++ + PA + + F+TGI+V+D+ Sbjct: 98 GATLGRIFNVLGEPMD---NLGPVDTRTTSVIHRSAPAFTQLDTKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G ++G+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 214 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 ++ KS V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 215 VINEQDIAKSKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNQQDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 333 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392 Query: 384 EETRDI 389 +E +DI Sbjct: 393 KELQDI 398 >gi|75332461|sp|Q95AD7|ATPB_PHOTN RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|16943755|emb|CAD10768.1| atp synthase, beta subunit [Phormium tenax] Length = 498 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G++IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGRKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|21633347|gb|AAM52148.1| ATP synthase beta subunit [Tetralocularia pennellii] Length = 485 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 97 GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESR 213 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 392 KELQDIIAILG 402 >gi|4063522|gb|AAC98319.1| ATP synthase beta subunit [Acer saccharum] Length = 456 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|18077557|emb|CAC88848.1| atpD beta synthase chain [Pseudomonas fluorescens] Length = 258 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 6/222 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 23 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 83 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDL 200 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242 >gi|313576709|gb|ADR66862.1| ATP synthase beta subunit [Ternstroemia fragrans] Length = 479 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 175/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + ++ G V G + GR Sbjct: 40 KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 99 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +N Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 216 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 394 Query: 390 RLIGG 394 I G Sbjct: 395 IAILG 399 >gi|297588750|ref|ZP_06947393.1| V-type ATP synthase, subunit B [Finegoldia magna ATCC 53516] gi|297574123|gb|EFH92844.1| V-type ATP synthase, subunit B [Finegoldia magna ATCC 53516] Length = 462 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/316 (29%), Positives = 163/316 (51%), Gaps = 13/316 (4%) Query: 60 GQVIRINLDIVYICPVGIGEEISLGDLVFHW-GR-FRISPSACWCGRVINALGKPIDGDD 117 G+V+ I+ D+ + I+L + + GR + S GRV + LG+PID Sbjct: 42 GRVVEIDHDVAMVQVFEGTSGINLQETTVRFLGRPLELGVSEDMIGRVFDGLGRPIDNGP 101 Query: 118 SLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTL 177 + D ++I ++R + +TG+ ID L GQ++ +F+GSG+ + L Sbjct: 102 KIIPED-KVDINGSSINPVSRDYPSEFIETGVSTIDGLNTLVRGQKLPIFSGSGLPHNKL 160 Query: 178 LSMFARS-------DCFDKVIISLVGERGREVREFIEDYLGDN-LKKSVVVVATSDESPI 229 + AR D F V+ + +G E + FI D+ + ++V+ + +D+ I Sbjct: 161 AAQIARQAKVLGKDDKF-AVVFAAMGITFEEAQYFIGDFNKTGAIDRAVLFMNLADDPAI 219 Query: 230 LRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFS 288 R P A+T AE+ + KG +VL+I+ +T +A ++RE++ E+P RGYP +++ Sbjct: 220 ERLSTPKMALTCAEFLAFEKGMHVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLYT 279 Query: 289 ELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRY 348 +L L ER G +G+IT + + + D+ PI D I +G I+L+R L ++G Sbjct: 280 DLATLYERAGRIVGREGSITQIPILTMPEDDITHPIPDLTGYITEGQIILSRELYKKGYE 339 Query: 349 PPVDPLASVSRLADKA 364 PP++ + S+SRL DK Sbjct: 340 PPINAIPSLSRLKDKG 355 >gi|219552238|gb|ACL26834.1| ATP synthase beta chain [Phyllanthus gneissicus] Length = 423 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 85 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 380 ELQDIIAILG 389 >gi|155029317|dbj|BAF75542.1| ATP synthase beta subunit [Seidelia triandra] Length = 489 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DN+GQ I + ++ V + + + G V G + GR Sbjct: 42 KGRDNVGQEINVTCEVQQLLGNNRVRTVAMSATDGLKRGMEVIDTGAPLSVPVGGATLGR 101 Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D LG D I P + F+TGI+V+D+ P G Sbjct: 102 IFNVLGEPVD---DLGPVDTRARSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ +N Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEEN 218 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 337 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDI 396 Query: 390 RLIGG 394 I G Sbjct: 397 IAILG 401 >gi|110456680|gb|ABG74789.1| ATPase beta subunit [Jasminum abyssinicum] Length = 498 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G ++G+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKVGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E K+ + + R+ Sbjct: 339 PATTFAHLDATTVLSRVLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYKIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|46360675|gb|AAS89119.1| ATP synthase beta subunit [Hattorianthus erimonus] Length = 382 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/307 (32%), Positives = 159/307 (51%), Gaps = 22/307 (7%) Query: 104 RVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHG 161 R+ N LG+P+D +LG D M + + PA + + F+TGI+V+D+ P G Sbjct: 4 RIFNVLGEPVD---NLGPVDTGMTFPIHRAAPAFIQLDTKLSIFETGIKVVDLLAPYRRG 60 Query: 162 QRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------D 212 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 61 GKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEQ 120 Query: 213 NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREI 269 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E+ Sbjct: 121 NISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEV 180 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 181 SALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTF 238 Query: 330 SILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETR 387 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E + Sbjct: 239 AHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKELQ 297 Query: 388 DIRLIGG 394 DI I G Sbjct: 298 DIIAILG 304 >gi|332105877|gb|AEE01401.1| ATP synthase beta chain [Gossypium arboreum] Length = 493 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 99 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 394 KELQDIIAILG 404 >gi|56675712|emb|CAB64365.2| ATP synthase [Citrus x paradisi] Length = 477 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 98 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 214 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 215 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 274 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 275 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 332 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 333 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 392 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 393 KELQDIIAILG 403 >gi|52082864|gb|AAU26013.1| ATPase beta subunit [Piper umbellatum] Length = 477 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D +GQ I + ++ V + + ++ G V G + GR Sbjct: 30 KGQDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMQVIDTGAPLSVPVGGATLGR 89 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 90 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGVINEQN 206 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 L +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 207 LAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 384 Query: 390 RLIGG 394 I G Sbjct: 385 IAILG 389 >gi|6689307|emb|CAB65433.1| ATP synthase beta subunit [Sesamum indicum] Length = 498 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|14718222|gb|AAK72849.1| ATP synthase beta subunit [Shepherdia canadensis] Length = 476 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 110/365 (30%), Positives = 173/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + E + G V G + GR Sbjct: 39 KGRDTLGQEINLTCEVQQLLGNNRVRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGR 98 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P + F+TGI+V+D+ P G Sbjct: 99 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 155 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 156 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 215 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 216 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 275 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 276 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 333 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 334 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 393 Query: 390 RLIGG 394 I G Sbjct: 394 IAILG 398 >gi|6017824|gb|AAF01646.1| ATP synthase beta subunit [Rheum rhaponticum] Length = 498 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 221 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R+LA +G YP VDPL S S L + K+ + + R+ Sbjct: 339 PATTFAHLDATTVLSRALAAKGIYPAVDPLDSTSTMLQPRIVGEAHYKIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|305671633|gb|ADM63126.1| ATP synthase beta subunit [Coriandrum sativum] Length = 489 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|123325631|gb|ABM74440.1| ATP synthase beta subunit [Citrus limonia] Length = 429 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 48 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 104 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 105 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 164 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 165 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 224 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 225 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 282 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 283 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 342 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 343 KELQDIIAILG 353 >gi|119368014|dbj|BAF40502.1| ATP synthase beta subunit [Passiflora quadrangularis] Length = 487 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPID---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+ +S V V +E P R LTA+++AEYF +VLL +D+I RF Sbjct: 213 VINEKNITESKVALVYGQMNEPPGARMRVGLTALSMAEYFRDVNKQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKTGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + ++ K S+ + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGSEHYKTAQSVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|1934688|gb|AAB51731.1| ATP synthase beta chain [Tmesipteris tannensis] Length = 443 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 153/312 (49%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D I P F+TGI+V+D+ P Sbjct: 72 ATLGRIFNVLGEPVD---NLGPINADKKSPIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 128 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 129 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESK 187 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+TIAEYF +VLL +D+I RF Sbjct: 188 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 247 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 248 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTREGSITSIQAVYVPADDLTDPA 305 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 306 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQR 364 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 365 YKELQDIIAILG 376 >gi|323715492|gb|ADY04814.1| ATP synthase beta subunit [Platycrater arguta] Length = 483 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 93 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 151 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 211 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 212 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 271 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 329 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 330 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 389 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 390 LQDIIAILG 398 >gi|323715474|gb|ADY04805.1| ATP synthase beta subunit [Hydrangea peruviana] Length = 485 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 94 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 152 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 212 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 213 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 272 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 330 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 331 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 390 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 391 LQDIIAILG 399 >gi|170178346|gb|ACB10592.1| ATP synthase beta subunit [Cornus florida] Length = 445 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D GQ I + ++ V + E ++ G V G + GR Sbjct: 11 KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70 Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D ++ I P + F+TGI+V+D+ P G Sbjct: 71 IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 127 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 128 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 187 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 188 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 247 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 248 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 305 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 306 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 365 Query: 390 RLIGG 394 I G Sbjct: 366 IAILG 370 >gi|219552188|gb|ACL26809.1| ATP synthase beta chain [Glochidion obovatum] gi|219552192|gb|ACL26811.1| ATP synthase beta chain [Phyllanthus roseus] gi|219552194|gb|ACL26812.1| ATP synthase beta chain [Breynia disticha] gi|219552196|gb|ACL26813.1| ATP synthase beta chain [Breynia oblongifolia] gi|219552198|gb|ACL26814.1| ATP synthase beta chain [Breynia vitis-idaea] gi|219552200|gb|ACL26815.1| ATP synthase beta chain [Breynia retusa] gi|219552202|gb|ACL26816.1| ATP synthase beta chain [Breynia fruticosa] gi|219552204|gb|ACL26817.1| ATP synthase beta chain [Sauropus granulosus] gi|219552206|gb|ACL26818.1| ATP synthase beta chain [Sauropus androgynus] gi|219552208|gb|ACL26819.1| ATP synthase beta chain [Sauropus brevipes] gi|219552210|gb|ACL26820.1| ATP synthase beta chain [Sauropus quadrangularis] gi|219552214|gb|ACL26822.1| ATP synthase beta chain [Phyllanthus emblica] gi|219552216|gb|ACL26823.1| ATP synthase beta chain [Phyllanthus lepidocarpus] gi|219552218|gb|ACL26824.1| ATP synthase beta chain [Phyllanthus humbertii] gi|219552220|gb|ACL26825.1| ATP synthase beta chain [Phyllanthus marojejiensis] Length = 423 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 85 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 380 ELQDIIAILG 389 >gi|157325537|ref|YP_001468315.1| ATP synthase CF1 beta subunit [Ipomoea purpurea] gi|190358672|sp|A7Y3E6|ATPB_IPOPU RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|157056765|gb|ABV02355.1| ATP synthase CF1 beta subunit [Ipomoea purpurea] Length = 499 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|6687379|emb|CAB64927.1| ATP synthase beta subunit [Decumaria barbara] Length = 498 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 223 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|6686963|emb|CAB64786.1| ATP synthase beta subunit [Barleria prionitis] Length = 498 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|21633285|gb|AAM52117.1| ATP synthase beta subunit [Turbina oblongata] Length = 490 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|4206602|gb|AAD11732.1| ATP synthase beta subunit [Eremocitrus glauca] Length = 470 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 88 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 205 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 383 KELQDIIAILG 393 >gi|123325617|gb|ABM74433.1| ATP synthase beta subunit [Citrus ichangensis] Length = 466 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|19033075|gb|AAL83522.1|AF408794_1 ATP synthase beta subunit [Onychonema sp. UTEX LB 832] Length = 402 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 160/312 (51%), Gaps = 28/312 (8%) Query: 102 CGRVINALGKPIDGDDSLGK-GDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D LG + + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---ELGPVNATTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI--------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESKVI 155 Query: 207 -EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 ED + D+ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 156 NEDNISDS--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 213 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 214 AGSEVSALLGRMPSAVGYQPTLGTEMGGLQERI--TSTKEGSITSIQAVYVPADDLTDPA 271 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W A+ + + + R Sbjct: 272 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKKTLQR 330 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 331 YKELQDIIAILG 342 >gi|323715460|gb|ADY04798.1| ATP synthase beta subunit [Cardiandra alternifolia] Length = 481 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 88 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 146 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 147 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 206 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 207 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 266 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 267 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 324 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 325 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 384 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 385 LQDIIAILG 393 >gi|306773432|emb|CBJ55292.1| putative beta subunit of chloroplast ATP synthase [Alsophila havilandii] Length = 383 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 102/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 8 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 NL +S V V +E P R TA T+AEYF +VLL +D+I RF + E Sbjct: 125 QNLSESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 301 Query: 387 RDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 302 QDIIAI----PGLD 311 >gi|305671691|gb|ADM63155.1| ATP synthase beta subunit [Angelica sylvestris] Length = 489 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|219552226|gb|ACL26828.1| ATP synthase beta chain [Phyllanthus mangenotii] Length = 420 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 82 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 138 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 139 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 198 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 199 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 258 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 259 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 316 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 317 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 376 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 377 ELQDIIAILG 386 >gi|154151883|ref|YP_001405501.1| V-type ATP synthase subunit B [Candidatus Methanoregula boonei 6A8] gi|167016628|sp|A7IAU7|VATB_METB6 RecName: Full=V-type ATP synthase beta chain; AltName: Full=V-ATPase subunit B gi|154000435|gb|ABS56858.1| ATP synthase, B subunit [Methanoregula boonei 6A8] Length = 462 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/348 (28%), Positives = 174/348 (50%), Gaps = 24/348 (6%) Query: 60 GQVIRINLDIVYI----CPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDG 115 GQV+ + D+V + GIG + + F ++ GR+++ GKPIDG Sbjct: 41 GQVLDTSDDLVVVQIFETTTGIGRD---SGVRFTGETIKMPVGREMLGRILSGGGKPIDG 97 Query: 116 DDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKS 175 + + ++I R +TGI ID L GQ++ +F+G+G+ + Sbjct: 98 GPEIVP-EKRLDITGAAINPWARNSPSDFIQTGISTIDGTNTLVRGQKLPIFSGAGLPHN 156 Query: 176 TLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDY-LGDNLKKSVVVVATSDES 227 + AR ++ F V+ + +G E F++D+ L+ +VV + +D+ Sbjct: 157 NVALQIARQAKVPGSTESF-AVVFAAMGITKEEANYFMQDFERTGALEHAVVFLNLADDP 215 Query: 228 PILRKMAPLTAVTIAEYFSSK-GDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSV 286 + R + P A+T AEY + + G +VL+IL +T + ++R+I E+P RGYP + Sbjct: 216 AVERIITPRLALTTAEYLAFELGMHVLVILTDMTNYCEALRQIGAAREEVPGRRGYPGYM 275 Query: 287 FSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEG 346 +++L + ER G + +KG++T + + + GD+ PI D I +G IV+NR L +G Sbjct: 276 YTDLACIYERAGIIKGQKGSVTQIPILTMPGDDITHPIPDLTGYITEGQIVVNRELHRKG 335 Query: 347 RYPPVDPLASVSRLAD----KAWSADEKKLVSSLTHLIHRFEETRDIR 390 YPP++ L S+SRL + K + ++ K VS + + E D+R Sbjct: 336 IYPPINVLPSLSRLMNLGIGKGHTREDHKKVSD--QMYAGYAEGNDLR 381 >gi|113910902|gb|ABI48183.1| ATPase beta subunit [Hypnum imponens] Length = 465 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+ +D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 200 INEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|56675897|emb|CAB90024.2| ATP synthase beta subunit [Bouvardia ternifolia] Length = 490 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 110/372 (29%), Positives = 180/372 (48%), Gaps = 31/372 (8%) Query: 47 DFVVHQGKNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISP 97 D +V +GK D +GQ I + ++ V + + ++ G V G + Sbjct: 36 DALVVKGK--DTVGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIGTGAPLSVPV 93 Query: 98 SACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIF 155 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 94 GGATLGRIFNVLGEPVD---NLGPVDTRTTAPIHRSAPAFIQLDTKLSIFETGIKVVDLL 150 Query: 156 TPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 APYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKES 210 Query: 212 -----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 GVINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 270 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 328 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + + R Sbjct: 329 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQR 388 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 389 YKELQDIIAILG 400 >gi|24940266|emb|CAD43399.1| ATP synthase beta subunit [Tiquilia plicata] Length = 480 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 160/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D L+ + + PA + + F+TGI+V+D+ P Sbjct: 94 ATLGRIFNVLGEPVD---NLGPVDTLTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 150 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 211 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKSGSITSIQAVYVPADDLTDPAP 328 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYK 388 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 389 ELQDIIAILG 398 >gi|21633445|gb|AAM52197.1| ATP synthase beta subunit [Porana commixta] Length = 486 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/314 (31%), Positives = 158/314 (50%), Gaps = 26/314 (8%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LGKP+D +LG D + I P + F+TGI+V+D+ Sbjct: 98 GSTLGRIFNVLGKPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 154 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------ 206 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 155 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKES 213 Query: 207 ----EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITR 261 E+ + ++ K +V +E P R LTA+T+AEYF + +VLL +D+I R Sbjct: 214 GVINEETIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFR 271 Query: 262 FAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHN 321 F + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ Sbjct: 272 FVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLT 329 Query: 322 DPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLI 380 DP + + LD VL+R LA +G YP VDPL S S + +E + + + Sbjct: 330 DPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTL 389 Query: 381 HRFEETRDIRLIGG 394 R++E +DI I G Sbjct: 390 QRYKELQDIIAILG 403 >gi|7708524|emb|CAB89949.1| ATP synthase beta subunit [Ochna multiflora] Length = 484 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G LP A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRLPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|4063554|gb|AAC98335.1| ATP synthase beta subunit [Nicotiana tabacum] Length = 456 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIEVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|4063568|gb|AAC98342.1| ATP synthase beta subunit [Pavonia multiflora] Length = 456 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|57868920|gb|AAW57456.1| ATP synthase beta subunit [Hydrangea sp. JS-2005] Length = 492 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 100 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 158 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 218 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 219 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 278 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 336 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 337 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 396 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 397 LQDIIAILG 405 >gi|53713460|ref|YP_099452.1| F0F1 ATP synthase subunit beta [Bacteroides fragilis YCH46] gi|60681706|ref|YP_211850.1| F0F1 ATP synthase subunit beta [Bacteroides fragilis NCTC 9343] gi|253565448|ref|ZP_04842903.1| ATP synthase subunit beta [Bacteroides sp. 3_2_5] gi|55977771|sp|P13356|ATPB_BACFR RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|81315229|sp|Q5LD89|ATPB_BACFN RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|52216325|dbj|BAD48918.1| ATP synthase beta chain [Bacteroides fragilis YCH46] gi|60493140|emb|CAH07921.1| ATP synthase beta chain [Bacteroides fragilis NCTC 9343] gi|251945727|gb|EES86134.1| ATP synthase subunit beta [Bacteroides sp. 3_2_5] Length = 505 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + D + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKELNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ K+S+ +V +E P R L+ +T+AE F G Sbjct: 210 GEAFKESMEKGHWDLSKVDYNEVEKSQATLVFGQMNEPPGARASVALSGLTVAESFRDMG 269 Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + + Sbjct: 270 AKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKT 327 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPH 387 Query: 365 WSADEKKLVSS-LTHLIHRFEETRDI 389 E V+ + ++ R +E +DI Sbjct: 388 IVGQEHYDVAQRVKQILQRNKELQDI 413 >gi|332105885|gb|AEE01405.1| ATP synthase beta chain [Thespesia populnea] Length = 493 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 99 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 394 KELQDIIAILG 404 >gi|218130967|ref|ZP_03459771.1| hypothetical protein BACEGG_02569 [Bacteroides eggerthii DSM 20697] gi|317476278|ref|ZP_07935528.1| ATP synthase F1 [Bacteroides eggerthii 1_2_48FAA] gi|217986839|gb|EEC53171.1| hypothetical protein BACEGG_02569 [Bacteroides eggerthii DSM 20697] gi|316907552|gb|EFV29256.1| ATP synthase F1 [Bacteroides eggerthii 1_2_48FAA] Length = 506 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/327 (29%), Positives = 160/327 (48%), Gaps = 45/327 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + + I + P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKELDRTG-AYPIHREPPKFEDLTTVQEVLYTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIQELINNIAKKQNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 G+ KK + ++ +E P R+ L+ +T+AE F G Sbjct: 210 GEEFKKGMEEGHWDLSKVDYNEVAKSQVSLIFGQMNEPPGARQSVALSGLTVAESFRDMG 269 Query: 250 D------NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + Sbjct: 270 SESNGPRDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTR 327 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 NGSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDP 387 Query: 364 AWSADEK-KLVSSLTHLIHRFEETRDI 389 E ++ + ++ R +E +DI Sbjct: 388 HIVGQEHYEVAQRVKQILQRNKELQDI 414 >gi|123325667|gb|ABM74458.1| ATP synthase beta subunit [Fortunella margarita] Length = 466 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|332105879|gb|AEE01402.1| ATP synthase beta chain [Luehea divaricata] Length = 493 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 99 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 394 KELQDIIAILG 404 >gi|305671625|gb|ADM63122.1| ATP synthase beta subunit [Hydrocotyle vulgaris] Length = 464 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 74 GTTLGRIFNVLGEPVD---NLGSVDTHTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 130 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 131 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 190 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 191 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 250 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 251 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 308 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 309 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 368 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 369 KELQDIIAILG 379 >gi|257852982|gb|ACV71502.1| ATP synthase beta subunit [Brunellia acutangula] Length = 489 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPID---NLGPVDTCTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|257790799|ref|YP_003181405.1| ATP synthase F1, beta subunit [Eggerthella lenta DSM 2243] gi|317488489|ref|ZP_07947040.1| ATP synthase F1 [Eggerthella sp. 1_3_56FAA] gi|325831926|ref|ZP_08165023.1| ATP synthase F1, beta subunit [Eggerthella sp. HGA1] gi|257474696|gb|ACV55016.1| ATP synthase F1, beta subunit [Eggerthella lenta DSM 2243] gi|316912421|gb|EFV33979.1| ATP synthase F1 [Eggerthella sp. 1_3_56FAA] gi|325486247|gb|EGC88699.1| ATP synthase F1, beta subunit [Eggerthella sp. HGA1] Length = 483 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/297 (31%), Positives = 154/297 (51%), Gaps = 8/297 (2%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N +G+P+D + + + M I P + F+TGI+ ID+ P G Sbjct: 105 GRIWNVMGEPVD-EKPMPEVKGYMPIHRPAPDYDELSTTTEIFETGIKAIDLVEPFVKGG 163 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDK---VIISLVGERGREVRE-FIEDYLGDNLKKSV 218 + G+F G+G+GK+ ++ + + + + VGER RE + ++E + K+ Sbjct: 164 KTGLFGGAGVGKTVIIQELINNLAQEHGGTSVFTGVGERTREGTDLYLEMSDSGVINKTC 223 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278 +V +E P R L +T AEYF +G +VLL +D+I RF + E++ G +P Sbjct: 224 LVYGQMNEPPGARLRVGLAGLTEAEYFRDQGQDVLLFVDNIFRFTQAGSEVSALLGRMPS 283 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 A GY ++ +E+ L ERI + G+IT+V +V V D+ DP + + LD VL Sbjct: 284 AVGYQPTLATEMGDLQERI--TSTSTGSITSVQAVYVPADDLTDPAPATTFTHLDAKTVL 341 Query: 339 NRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVS-SLTHLIHRFEETRDIRLIGG 394 +RS++E G YP VDPL S SR D +E V+ + L+ +++ +DI I G Sbjct: 342 SRSISELGIYPAVDPLESTSRALDPQIVGEEHYRVAVGIQELLQNYKDLQDIIAILG 398 >gi|123325633|gb|ABM74441.1| ATP synthase beta subunit [Citrus macroptera] Length = 466 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|33327745|gb|AAQ09236.1| ATP synthase beta subunit [Cornus mas] Length = 489 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D GQ I + ++ V + E ++ G V G + GR Sbjct: 42 KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 101 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 102 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 158 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 159 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 218 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 219 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 278 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 279 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 336 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E ++ + + R++E +DI Sbjct: 337 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 396 Query: 390 RLIGG 394 I G Sbjct: 397 IAILG 401 >gi|12004159|gb|AAG43919.1|AF213788_1 ATP synthase beta subunit [Primula veitchiana] Length = 441 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 65 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 182 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 300 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKETLQRY 359 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 360 KELQDIIAILG 370 >gi|19033079|gb|AAL83524.1|AF408796_1 ATP synthase beta subunit [Gonatozygon monotaenium] Length = 402 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 161/309 (52%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D LG +++ + + PA + + F+TGI+V+D+ P Sbjct: 40 LGRIFNVLGEPVD---ELGPVNITTTSPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 96 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 97 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 156 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 157 EENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 216 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 217 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 274 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAW--SADEKKLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W A+ + + + R++E Sbjct: 275 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGAEHYETAQGVKKTLQRYKE 333 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 334 LQDIIAILG 342 >gi|7706839|emb|CAB90028.1| ATP synthase beta subunit [Averrhoa carambola] Length = 491 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 97 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 214 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFMDNIFRFVQ 273 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 392 KELQDIIAILG 402 >gi|6634488|emb|CAB64375.1| ATP synthase [Citrus trifoliata] Length = 482 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 94 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|46447304|ref|YP_008669.1| F0F1 ATP synthase subunit alpha [Candidatus Protochlamydia amoebophila UWE25] gi|81626571|sp|Q6MAK5|ATPA_PARUW RecName: Full=ATP synthase subunit alpha; AltName: Full=ATP synthase F1 sector subunit alpha; AltName: Full=F-ATPase subunit alpha gi|46400945|emb|CAF24394.1| probable H+-transporting ATP synthase (alpha chain, atpA) [Candidatus Protochlamydia amoebophila UWE25] Length = 508 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/336 (29%), Positives = 165/336 (49%), Gaps = 11/336 (3%) Query: 58 NLGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISP-SACWCGRVINALGKPIDGD 116 LG V+ + +D V + +G I D+V G+ P GRVINALG+PIDG Sbjct: 61 TLGIVLNLEIDNVGVIILGSDRNIREQDIVKRTGKIASVPVGEGMLGRVINALGQPIDGK 120 Query: 117 DSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKST 176 ++ + I S P + R+ V + +TGI+ ID P+ GQR + GK+T Sbjct: 121 GAIETKEFRA-IESSAPGVVQRKPVNEPVQTGIKAIDSMIPIGRGQRELIIGDRQTGKTT 179 Query: 177 LL--SMFARSDCFDKVIISLVGERGR---EVREFIEDYLGDNLKKSVVVVATSDESPILR 231 ++ ++ + + I +G++ +V + +E++ D +K +++V AT+ + L+ Sbjct: 180 VILDTIINQKNTGVCCIYVAIGQKSSTIAQVVKILEEH--DAMKYTIIVAATASDPAALQ 237 Query: 232 KMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELP 291 +AP +A + E+F G +V+ D +++ A + REIA P YP +F Sbjct: 238 YVAPYSATALGEHFMYNGKHVICFYDDLSKHAQAYREIALLLRRPPGREAYPGDIFYLHS 297 Query: 292 RLLERIGP--SEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYP 349 RLLER +E G++TAV + ++ I +V SI DG I L L G P Sbjct: 298 RLLERSAKLSTELGGGSLTAVPVIETQANDVTTYIPTNVISITDGQIYLESDLFYAGVRP 357 Query: 350 PVDPLASVSRLADKAWSADEKKLVSSLTHLIHRFEE 385 ++ S SR+ KA S KK+ +SL + ++ E Sbjct: 358 AINVGISASRVGGKAQSKAMKKVAASLRLDLAQYRE 393 >gi|212896634|gb|ACJ38520.1| membrane-bound ATP synthase subunit B [Cajanus cajan] Length = 470 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DN+GQ I + ++ V + + + G V G + GR Sbjct: 33 KGRDNVGQQINVTCEVQQLLGNNRVRAVAMSATDGLMRGMEVIDTGAPLSVPVGGATLGR 92 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+PID +LG D + I P + F+TGI+V+D+ P G Sbjct: 93 IFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 149 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 150 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKN 209 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 210 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 269 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 270 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 327 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 328 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 387 Query: 390 RLIGG 394 I G Sbjct: 388 IAILG 392 >gi|55957070|emb|CAB64876.2| ATP synthase beta subunit [Cyrtandra hawaiensis] Length = 498 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|62085188|gb|AAX62998.1| ATP synthase beta subunit [Poliothyrsis sp. Alford 44] Length = 484 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLETKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|229002374|dbj|BAH57911.1| ATP synthase beta subunit [Potamogeton fryeri] gi|229002376|dbj|BAH57912.1| ATP synthase beta subunit [Potamogeton natans] gi|229002382|dbj|BAH57917.1| ATP synthase beta subunit [Potamogeton praelongus] Length = 491 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 105 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 161 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 162 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 221 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 222 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQA 281 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 282 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 339 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R+ Sbjct: 340 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQKVKETLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|170178338|gb|ACB10588.1| ATP synthase beta subunit [Cornus chinensis] Length = 453 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D GQ I + ++ V + E ++ G V G + GR Sbjct: 11 KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 71 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 127 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 128 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 187 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 188 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 247 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 248 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 305 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E ++ + + R++E +DI Sbjct: 306 HLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 365 Query: 390 RLIGG 394 I G Sbjct: 366 IAILG 370 >gi|123325601|gb|ABM74425.1| ATP synthase beta subunit [Citrus aurantiifolia] Length = 466 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|113910894|gb|ABI48179.1| ATPase beta subunit [Hookeria acutifolia] Length = 472 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/312 (32%), Positives = 161/312 (51%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+ +D +LG D S+ + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGETVD---NLGPVDTSITFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L+ + A++ V + ER RE E E Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESK 198 Query: 210 LGDNLK----KSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + + K K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 VINEEKISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 258 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 376 YKELQDIIAILG 387 >gi|20514385|gb|AAM23011.1| ATP synthase beta subunit [Strasburgeria robusta] Length = 487 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 91 GATLGRIFNVLGEPVDNLGPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 149 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 209 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 269 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 327 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 328 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 387 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 388 LQDIIAILG 396 >gi|4995053|emb|CAB43983.1| H(+)-transporting ATP synthase [Adansonia rubrostipa] Length = 485 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|4206590|gb|AAD11726.1| ATP synthase beta subunit [Clausena excavata] Length = 476 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 88 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 205 VINDQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 322 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQGVKQTLQRY 382 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 383 KELQDIIAILG 393 >gi|332206766|ref|XP_003252465.1| PREDICTED: ATP synthase subunit beta, mitochondrial [Nomascus leucogenys] Length = 497 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 150/295 (50%), Gaps = 17/295 (5%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHG 161 GR++N +G+PID + + I ++ P M ++ TGI+V+D+ P G Sbjct: 141 LGRIMNVIGEPIDERGPIKTKQFA-PIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKG 199 Query: 162 QRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIED---YL 210 +IG+F G+G+GK+ L++ A++ V VGER RE E IE L Sbjct: 200 GKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG-VGERTREGNDLYHEMIESGVINL 258 Query: 211 GDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREI 269 D K +V +E P R LT +T+AEYF +G +VLL +D+I RF + E+ Sbjct: 259 KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEV 318 Query: 270 ATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVR 329 + G +P A GY ++ +++ + ERI + +KG+IT+V ++ V D+ DP + Sbjct: 319 SALLGRIPSAVGYQPTLATDMGTMQERI--TTTKKGSITSVQAIYVPADDLTDPAPATTF 376 Query: 330 SILDGHIVLNRSLAEEGRYPP-VDPLASVSRLADKAWSADEKKLVSSLTHLIHRF 383 + LD VL+R++AE G YP L + + ++E KL S I RF Sbjct: 377 AHLDATTVLSRAIAELGIYPADYKSLQDIIAILGMDELSEEDKLTVSRARKIQRF 431 >gi|301163249|emb|CBW22799.1| ATP synthase beta chain [Bacteroides fragilis 638R] Length = 505 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/326 (30%), Positives = 161/326 (49%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + D + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKELNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIEDYL--- 210 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE + Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 211 GDNLKKSV---------------------VVVATSDESPILRKMAPLTAVTIAEYF---- 245 G+ K+S+ +V +E P R L+ +T+AE F Sbjct: 210 GEAFKESMEKGHWDLSKVDYNEVEKSQATLVFGQMNEPPGARASVALSGLTVAESFRDIG 269 Query: 246 -SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 S ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + + Sbjct: 270 AKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKT 327 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPH 387 Query: 365 WSADEKKLVSS-LTHLIHRFEETRDI 389 E V+ + ++ R +E +DI Sbjct: 388 IVGQEHYDVAQRVKQILQRNKELQDI 413 >gi|229002370|dbj|BAH57909.1| ATP synthase beta subunit [Potamogeton alpinus] gi|229002372|dbj|BAH57910.1| ATP synthase beta subunit [Potamogeton distinctus] gi|229002380|dbj|BAH57916.1| ATP synthase beta subunit [Potamogeton perfoliatus] gi|229002386|dbj|BAH57915.1| ATP synthase beta subunit [Potamogeton malaianus] Length = 491 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 159/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQRVKETLQR 397 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 398 YKELQDIIAILG 409 >gi|219552246|gb|ACL26838.1| ATP synthase beta chain [Phyllanthus tenellus] Length = 423 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 85 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 380 ELQDIIAILG 389 >gi|123325579|gb|ABM74414.1| ATP synthase beta subunit [Atalantia monophylla] gi|123325587|gb|ABM74418.1| ATP synthase beta subunit [Citrus x paradisi] gi|123325591|gb|ABM74420.1| ATP synthase beta subunit [x Citrofortunella sp. PI 539802] gi|123325597|gb|ABM74423.1| ATP synthase beta subunit [Citrus maxima] gi|123325599|gb|ABM74424.1| ATP synthase beta subunit [Citrus sp. 'amboinensis'] gi|123325605|gb|ABM74427.1| ATP synthase beta subunit [Citrus aurantium] gi|123325607|gb|ABM74428.1| ATP synthase beta subunit [Citrus bergamia] gi|123325609|gb|ABM74429.1| ATP synthase beta subunit [Citrus celebica] gi|123325615|gb|ABM74432.1| ATP synthase beta subunit [Citrus hystrix] gi|123325619|gb|ABM74434.1| ATP synthase beta subunit [Citrus indica] gi|123325621|gb|ABM74435.1| ATP synthase beta subunit [Citrus jambhiri] gi|123325625|gb|ABM74437.1| ATP synthase beta subunit [Citrus latifolia] gi|123325637|gb|ABM74443.1| ATP synthase beta subunit [Citrus maxima] gi|123325639|gb|ABM74444.1| ATP synthase beta subunit [Citrus medica] gi|123325641|gb|ABM74445.1| ATP synthase beta subunit [Citrus myrtifolia] gi|123325643|gb|ABM74446.1| ATP synthase beta subunit [Citrus obovoidea] gi|123325645|gb|ABM74447.1| ATP synthase beta subunit [Citrus x paradisi] gi|123325647|gb|ABM74448.1| ATP synthase beta subunit [Citrus reticulata] gi|123325661|gb|ABM74455.1| ATP synthase beta subunit [Feroniella oblata] gi|123325671|gb|ABM74460.1| ATP synthase beta subunit [Citrus hybrid cultivar] gi|123325685|gb|ABM74467.1| ATP synthase beta subunit [Microcitrus australasica] gi|123325695|gb|ABM74472.1| ATP synthase beta subunit [Microcitrus warburgiana] Length = 466 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|123325611|gb|ABM74430.1| ATP synthase beta subunit [Citrus gracilis] Length = 466 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|110915700|gb|ABH02638.1| ATP synthase beta subunit [Sphenopus divaricatus] Length = 471 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG + + I P + F+TGI+V+D+ Sbjct: 77 GATLGRIFNVLGEPVD---NLGPVESSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 133 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 134 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 193 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 194 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 253 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +KG+IT++ +V V D+ DP Sbjct: 254 AGSEVSALLGRMPSAVGYXPTLSTEMGSLQERI--ASTKKGSITSIQAVYVPADDLTDPA 311 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 312 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 371 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 372 KELQDIIAILG 382 >gi|130750318|gb|ABO32264.1| ATP synthase subunit B [Aphelia brizula] Length = 427 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/313 (31%), Positives = 158/313 (50%), Gaps = 26/313 (8%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S+ I P ++ F+TGI+V+D+ P Sbjct: 35 ATLGRIFNVLGEPVD---NLGPVDTSVTSPIHRSAPAFIDLDTKLSIFETGIKVVDLLAP 91 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFI------- 206 G +IG+F G+G+GK+ L+ + A++ V + ER RE + Sbjct: 92 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYIEMKESG 150 Query: 207 ---EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRF 262 E L ++ K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 151 VINEKDLAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKKDVLLFIDNIFRF 208 Query: 263 AHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHND 322 + E++ G +P A GY ++ +E+ L ERI + +K +IT++ +V V D+ D Sbjct: 209 VQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKASITSIQAVYVPADDLTD 266 Query: 323 PIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIH 381 P + + LD VL+R LA +G YP VDPL S S + +E ++ + + Sbjct: 267 PAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGNEHYEIAQRVKQTLQ 326 Query: 382 RFEETRDIRLIGG 394 R++E +DI I G Sbjct: 327 RYKELQDIIAILG 339 >gi|4995059|emb|CAB43991.1| H(+)-transporting ATP synthase [Byttneria filipes] Length = 478 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 101/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+PID +LG D + + K PA + + F+TGI+V+D+ Sbjct: 88 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 144 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 145 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 204 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 205 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 264 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + + G+IT++ +V V D+ DP Sbjct: 265 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKXGSITSIQAVYVPADDLTDPA 322 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 323 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 382 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 383 KELQDIIAILG 393 >gi|21684881|emb|CAD11567.1| ATP synthase beta subunit [Coleochloa abyssinica] Length = 480 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 102/310 (32%), Positives = 153/310 (49%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID LG D S I P + F+TGI+V+D+ P Sbjct: 93 TTLGRIFNVLGEPID---DLGPVDTSTTSPIHRPAPAFVELDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESGV 209 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 NL +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 210 INEKNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + +KG IT++ +V V D+ DP Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKKGAITSIQAVYVPADDLTDPAP 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R+LA +G YP V PL S S + DE ++ + R++ Sbjct: 328 ATTFAHLDATTVLSRALAAKGIYPAVSPLDSTSTMLQPNIVGDEHYEIAQRVKQTSQRYK 387 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 388 ELQDIIAILG 397 >gi|21633339|gb|AAM52144.1| ATP synthase beta subunit [Aniseia cernua] Length = 487 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 99 GSTLGRIFNVLGEPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLAIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 215 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 216 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 394 KELQDIIAILG 404 >gi|143924|gb|AAA22901.1| ATP-synthetase beta-subunit [Bacteroides fragilis] Length = 505 Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/326 (30%), Positives = 158/326 (48%), Gaps = 44/326 (13%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N +G IDG L + D + I P + V++ TGI+VID+ P G Sbjct: 93 GRLMNVVGDSIDGMKELNR-DGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEPYSKGG 151 Query: 163 RIGVFAGSGIGKSTLL-----SMFARSDCFDKVIISLVGERGRE----VREFIE------ 207 +IG+F G+G+GK+ L+ ++ + + F + + VGER RE +RE IE Sbjct: 152 KIGLFGGAGVGKTVLIMELINNIAKKHNGFS--VFAGVGERTREGNDLLREMIESGVIRY 209 Query: 208 ------------------DYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKG 249 DY ++ +V +E P R L+ +T+AE F G Sbjct: 210 GEAFKESMEKGHWDLSKVDYNEVEKSQATLVFGQMNEPPGARASVALSGLTVAESFRDMG 269 Query: 250 D-----NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEK 304 ++L +D+I RF + E++ G +P A GY ++ +E+ + ERI + + Sbjct: 270 AKSGARDILFFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERI--TSTKT 327 Query: 305 GNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 G+IT+V +V V D+ DP + + LD VL+R + E G YP VDPL S SR+ D Sbjct: 328 GSITSVQAVYVPADDLTDPAPATTFTHLDATTVLSRKITELGIYPAVDPLESTSRILDPH 387 Query: 365 WSADEKKLVSS-LTHLIHRFEETRDI 389 E V+ + ++ R +E +DI Sbjct: 388 IVGQEHYDVAQRVKQILQRNKELQDI 413 >gi|123325669|gb|ABM74459.1| ATP synthase beta subunit [Fortunella polyandra] Length = 465 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|194267385|gb|ACF35678.1| ATP synthase beta subunit [Grevillea caleyi] Length = 487 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|110915696|gb|ABH02636.1| ATP synthase beta subunit [Sclerochloa dura] Length = 472 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLS--MEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDSSATFPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 N+++S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 195 VINEKNIEESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI ++K G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERIAFTKK--GSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGNEHYETAQRVKETLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|118917406|dbj|BAF40511.1| ATP synthase beta subunit [Phyllanthus flexuosus] Length = 489 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|113910768|gb|ABI48116.1| ATPase beta subunit [Riccia sorocarpa] Length = 456 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + + + PA + + F+TGI+V+D+ P Sbjct: 69 LGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 125 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 126 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 185 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 186 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 245 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 246 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 303 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 304 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 362 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 363 LQDIIAILG 371 >gi|7688421|emb|CAB89737.1| ATP synthase beta subunit [Viscainoa geniculata] Length = 487 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ P Sbjct: 104 ATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 160 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 220 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 221 INEKNIAESKVALVYGQXNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 280 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 338 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 339 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYK 398 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 399 ELQDIIAILG 408 >gi|4206578|gb|AAD11720.1| ATP synthase beta subunit [Severinia buxifolia] Length = 474 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 93 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 149 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 210 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 388 KELQDIIAILG 398 >gi|18077567|emb|CAC88853.1| atpD beta synthase chain [Pseudomonas putida] Length = 258 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 23 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 83 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDL 200 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242 >gi|18077547|emb|CAC88843.1| atpD beta synthase chain [Pseudomonas cichorii] gi|18077571|emb|CAC88855.1| atpD beta synthase chain [Pseudomonas syringae] Length = 258 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 6/222 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 23 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 83 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + + G+IT++ +V V D+ Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGTLQERI--TSTKNGSITSIQAVYVPADDL 200 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242 >gi|328924790|gb|ADO64897.2| ATP synthase CF1 beta subunit [Theobroma cacao] Length = 498 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|194267341|gb|ACF35657.1| ATP synthase beta subunit [Orites diversifolia] Length = 497 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|167391812|ref|YP_001671690.1| ATP synthase CF1 beta subunit [Carica papaya] gi|190358275|sp|B1A942|ATPB_CARPA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|166344139|gb|ABY86789.1| ATP synthase CF1 beta chain [Carica papaya] Length = 498 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKFSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|149384671|gb|ABR25144.1| ATP synthase beta chain [Nephrolepis hirsutula] gi|149798703|gb|ABR32042.1| ATP synthase beta chain [Nephrolepis cordifolia] Length = 426 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 156/309 (50%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + I P F+TGI+V+D+ P Sbjct: 39 LGRIFNVLGEPVD---NLGPVQSSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 95 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 96 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 155 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 156 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 215 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 216 EVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 273 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 274 TSAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 332 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 333 LQDIIAILG 341 >gi|119368506|ref|YP_913194.1| ATP synthase beta subunit [Gossypium barbadense] gi|125987718|sp|A0ZZ42|ATPB_GOSBA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|119224868|dbj|BAF41254.1| ATP synthase beta subunit [Gossypium barbadense] Length = 498 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 E +DI I G Sbjct: 399 NELQDIIAILG 409 >gi|61968203|gb|AAX57028.1| ATP synthase beta subunit [Andrachne aspera] Length = 479 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYK 387 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 388 ELQDIIAILG 397 >gi|6689056|emb|CAB65372.1| ATP synthase beta subunit [Paulownia tomentosa] Length = 498 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTFPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|4063570|gb|AAC98343.1| ATP synthase beta subunit [Tropaeolum tricolor] Length = 456 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|15828921|ref|NP_326281.1| F0F1 ATP synthase subunit beta [Mycoplasma pulmonis UAB CTIP] gi|17372627|sp|Q98QB6|ATPB2_MYCPU RecName: Full=ATP synthase subunit beta 2; AltName: Full=ATP synthase F1 sector subunit beta 2; AltName: Full=F-ATPase subunit beta 2 gi|14089864|emb|CAC13623.1| ATP SYNTHASE BETA CHAIN [Mycoplasma pulmonis] Length = 468 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/347 (28%), Positives = 178/347 (51%), Gaps = 21/347 (6%) Query: 75 VGIGEE-ISLGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLS-MEIMSK 131 + IGEE I + D+ F + + G + + LG ++ GD +E+ S Sbjct: 53 IKIGEEQIKINDIAIDTKESFNVPVGSATNGAIFDVLGNLLNEH----PGDFKKVEVDST 108 Query: 132 VPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL-----SMFARSDC 186 + + + TGI++ID F P+ G +IG+F G+G+GK+ ++ ++ + D Sbjct: 109 ISTEKHFNSDNEIINTGIKIIDFFVPIIKGSKIGIFGGAGVGKTIIIKELIFNISRQRDS 168 Query: 187 FD-KVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPL-TAVTIAEY 244 D KV GER RE +E ++ + +L KS + + P +M L +T AEY Sbjct: 169 NDVKVFFVGTGERTREAKELYDELVNSSLIKSTSLFISQMNEPSGSRMKILPVGITAAEY 228 Query: 245 F-SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 S+ +VL +D+I R+ + RE++ + G+ P GY ++ S++ + ER+ S+ Sbjct: 229 ARDSEQKDVLFFVDNIYRYLQAGRELSFSLGKKPSEAGYQATLVSDISSVQERLANSKH- 287 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LAD 362 G+IT+ +V + D+ NDP + ++ + LD +VL+R + EG +P +DPL S S L + Sbjct: 288 -GSITSFQTVFLPMDDLNDPASVAILNHLDSSLVLSREIFAEGLFPAIDPLLSNSSLLQE 346 Query: 363 KAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYR---PGVDLILDKA 406 K LV + ++H++++ ++ +I G + P LI+ KA Sbjct: 347 KIVGKRHILLVKRVKKILHKYKQLEEMIMILGVQELEPNNRLIVKKA 393 >gi|332105887|gb|AEE01406.1| ATP synthase beta chain [Grewia orientalis] Length = 476 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 86 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 142 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 143 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 202 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 203 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 262 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 263 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 320 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 321 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 380 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 381 KELQDIIAILG 391 >gi|184127849|gb|ACC67824.1| ATP synthase beta chain [Marattia alata] Length = 399 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P Sbjct: 12 LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 68 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 69 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 128 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 129 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 188 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 189 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 246 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 247 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 305 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 306 LQDIIAILG 314 >gi|61968289|gb|AAX57071.1| ATP synthase beta subunit [Phyllanthus cf. fuscoluridus Hoffmann et al. 246] Length = 479 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 387 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 388 ELQDIIAILG 397 >gi|21633393|gb|AAM52171.1| ATP synthase beta subunit [Porana volubilis] Length = 471 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 21/312 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG P+D + S I P + F+TGI+V+D+ P Sbjct: 82 GSTLGRIFNVLGAPVDNLGPVDTNTTSSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 141 Query: 159 CHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGREVREFI-------- 206 G +IG+F G+G+GK+ L++ A++ V + ER RE + Sbjct: 142 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESGV 200 Query: 207 --EDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFA 263 E+ + ++ K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 201 INEEKIAES--KVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFV 258 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 259 QAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDP 316 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + + R Sbjct: 317 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 376 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 377 YKELQDIIAILG 388 >gi|4995790|emb|CAB44267.1| H(+)-transporting ATP synthase [Reevesia thyrsoidea] Length = 486 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|62085143|gb|AAX62977.1| ATP synthase beta subunit [Spathiostemon javensis] Length = 482 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 89 GATLGRIFNVLGEPVD---DLGPVDTRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 145 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 146 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 205 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 206 VINEENLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 265 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 266 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 323 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 324 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 383 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 384 KELQDIIAILG 394 >gi|123325585|gb|ABM74417.1| ATP synthase beta subunit [Burkillanthus malaccensis] Length = 462 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|124361808|gb|ABN09346.1| ATP synthase beta subunit [Adinandra dumosa] gi|124361810|gb|ABN09347.1| ATP synthase beta subunit [Cleyera japonica] Length = 465 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + ++ G V G + GR Sbjct: 30 KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGR 89 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 90 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 146 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 147 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 206 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 207 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 266 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 267 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 324 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 325 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 384 Query: 390 RLIGG 394 I G Sbjct: 385 IAILG 389 >gi|114107140|ref|YP_740124.1| ATP synthase CF1 beta subunit [Daucus carota] gi|122233834|sp|Q0G9V5|ATPB_DAUCA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|113200915|gb|ABI32431.1| ATP synthase CF1 beta subunit [Daucus carota] Length = 498 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L + D + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQKVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|99640461|emb|CAJ45082.1| putative beta subunit of chloroplast ATP synthase [Culcita coniifolia] Length = 493 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 103/334 (30%), Positives = 165/334 (49%), Gaps = 25/334 (7%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR+ N LG+P+D + + + I P F+TGI+V+D+ P G Sbjct: 106 GRISNVLGEPVDNPGPV-ESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRRGG 164 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 165 KIGSFGGAGVGKTVLIMESTNNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINEQN 224 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIREIA 270 + +S V V ++E P R TA T+AEYF +VLL +D+I RF + E++ Sbjct: 225 ISESKVALVYGQTNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVS 284 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 285 ALSGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATTFA 342 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEETRD 388 LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E +D Sbjct: 343 HLDATTVLSRGLAAKGTYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEPQD 401 Query: 389 IRLIGGYRPGVDLILDK---AVHQVPIIYDFLKQ 419 I I PG+D + ++ V + I FL Q Sbjct: 402 IIAI----PGLDELSEEDRLTVARARKIERFLSQ 431 >gi|7708153|emb|CAB89913.1| ATP synthase beta subunit [Antirrhinum majus] Length = 489 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G + I P + F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNLGPVDTGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 221 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|62085219|gb|AAX63012.1| ATP synthase beta subunit [Dillenia philippinensis] Length = 482 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKRGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|256370597|ref|YP_003108422.1| F0F1 ATP synthase subunit beta [Candidatus Sulcia muelleri SMDSEM] gi|256009389|gb|ACU52749.1| F0F1 ATP synthase subunit beta [Candidatus Sulcia muelleri SMDSEM] Length = 550 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 117/376 (31%), Positives = 181/376 (48%), Gaps = 51/376 (13%) Query: 103 GRVINALGKPIDGDDSLGKGD-LSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GRV N +G IDG L K LS+ + PP TGI+VID+ P Sbjct: 88 GRVFNVVGDTIDGLGPLKKSKRLSIH---RDPPKFEELSTNLNILYTGIKVIDLIEPYIK 144 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGRE----VREFIED----Y 209 G +IG+F G+G+GK+ L+ + +S+ VGER RE +RE I Y Sbjct: 145 GGKIGLFGGAGVGKTVLIQELINNIAKSYGGLSVFAGVGERTREGNDLLREMISSGIIKY 204 Query: 210 LGDNLK--------------------KSVVVVATSDESPILRKMAPLTAVTIAEYF---- 245 LK K+ V +E P R L+ +T+AEY+ Sbjct: 205 GNSFLKEMTNGKWDLTKVDKTELKKSKATFVFGQMNEPPGARARVVLSGLTLAEYYRDYR 264 Query: 246 --SSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKE 303 S +G +VL +D+I RF + E++ G +P A GY ++ SE+ + ERI + + Sbjct: 265 DSSGQGRDVLFFIDNIFRFTQAGSELSALLGRMPSAVGYQPTLASEMGTMQERI--TSTK 322 Query: 304 KGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADK 363 KG+IT++ +V + D+ +DP + + LD VL+R +A G YP VDPL+S SR+ K Sbjct: 323 KGSITSIQAVYIPADDLSDPAPATTFAHLDATTVLSRKIASLGIYPAVDPLSSTSRILSK 382 Query: 364 AWSADEKKLVSS-LTHLIHRFEETRDIRLIGGYRPGVDLILDK-AVHQVPIIYDFLKQSP 421 ++ L + + ++ R++E +DI I G + DK VH+ + FL Q P Sbjct: 383 EVLGNDHYLCAQRVKKILQRYQELQDIIAILGIEELSE--EDKLIVHRARRVQRFLSQ-P 439 Query: 422 SDLSSEDVFQEITKKL 437 +++ + F IT KL Sbjct: 440 FNVAEQ--FTGITGKL 453 >gi|302874536|ref|YP_003843169.1| H+transporting two-sector ATPase alpha/beta subunit central region [Clostridium cellulovorans 743B] gi|307690852|ref|ZP_07633298.1| V-type ATP synthase subunit B [Clostridium cellulovorans 743B] gi|302577393|gb|ADL51405.1| H+transporting two-sector ATPase alpha/beta subunit central region [Clostridium cellulovorans 743B] Length = 460 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/278 (30%), Positives = 150/278 (53%), Gaps = 15/278 (5%) Query: 98 SACWCGRVINALGKPIDGDDSL---GKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDI 154 S GRV + +G+P D + + D++ E ++ PA R ++ +TG+ ID Sbjct: 82 SEDMLGRVFDGMGRPKDNGPKIMPEKRVDINGEAIN---PAA-RDYPDEFIQTGVSAIDH 137 Query: 155 FTPLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIED 208 L GQ++ VF+GSG+ + L + AR +D V+ + +G E + F++D Sbjct: 138 LNTLVRGQKLPVFSGSGLPHAELAAQIARQAKVLKADSKFAVVFAAIGITFEEAQFFVDD 197 Query: 209 YLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSI 266 + + +SV+ + +++ I R P A+T AE+ + KG +VL+IL +T + ++ Sbjct: 198 FTETGAIDRSVLFMNLANDPAIERIATPRMALTAAEFLAYEKGMHVLVILTDLTNYCEAL 257 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 RE++ E+P RGYP ++++L L ER G ++G++T + + + D+ PI D Sbjct: 258 REVSAARKEVPGRRGYPGYLYTDLSTLYERAGRIRGKEGSVTQIPILTMPEDDKTHPIPD 317 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L+R L ++G PP+D L S+SRL DK Sbjct: 318 LTGYITEGQIILSRELYKKGINPPIDVLPSLSRLKDKG 355 >gi|219552244|gb|ACL26837.1| ATP synthase beta chain [Reverchonia arenaria] Length = 423 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 84 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 201 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 378 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 379 KELQDIIAILG 389 >gi|219552222|gb|ACL26826.1| ATP synthase beta chain [Phyllanthus chamaecerasus] gi|219552224|gb|ACL26827.1| ATP synthase beta chain [Phyllanthus bourgeoisii] gi|219552228|gb|ACL26829.1| ATP synthase beta chain [Phyllanthus koniamboensis] gi|219552230|gb|ACL26830.1| ATP synthase beta chain [Phyllanthus caudatus] gi|219552232|gb|ACL26831.1| ATP synthase beta chain [Phyllanthus aeneus] gi|219552234|gb|ACL26832.1| ATP synthase beta chain [Phyllanthus guillauminii] gi|219552236|gb|ACL26833.1| ATP synthase beta chain [Phyllanthus vulcani] gi|219552248|gb|ACL26839.1| ATP synthase beta chain [Phyllanthus oligospermus] gi|219552252|gb|ACL26841.1| ATP synthase beta chain [Phyllanthus reticulatus] gi|219552254|gb|ACL26842.1| ATP synthase beta chain [Phyllanthus sp. Kawakita 23] gi|219552256|gb|ACL26843.1| ATP synthase beta chain [Phyllanthus liukiuensis] gi|219552258|gb|ACL26844.1| ATP synthase beta chain [Phyllanthus pulchroides] Length = 423 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 85 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 380 ELQDIIAILG 389 >gi|184127865|gb|ACC67832.1| ATP synthase beta chain [Marattia purpurascens] Length = 402 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D+ + + K PA + + F+TGI+V+D+ P Sbjct: 15 LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 71 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 72 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 131 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 132 QENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 191 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 192 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 249 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 250 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 308 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 309 LQDIIAILG 317 >gi|184127857|gb|ACC67828.1| ATP synthase beta chain [Marattia salicina] Length = 402 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D+ + + K PA + + F+TGI+V+D+ P Sbjct: 15 LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 71 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 72 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 131 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 132 QENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 191 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 192 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 249 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 250 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 308 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 309 LQDIIAILG 317 >gi|182417270|ref|ZP_02948621.1| V-type ATP synthase beta chain [Clostridium butyricum 5521] gi|237668253|ref|ZP_04528237.1| V-type ATP synthase beta chain (V-type ATPase subunitB) [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378867|gb|EDT76382.1| V-type ATP synthase beta chain [Clostridium butyricum 5521] gi|237656601|gb|EEP54157.1| V-type sodium ATPase, B subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 459 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 144/276 (52%), Gaps = 11/276 (3%) Query: 98 SACWCGRVINALGKPID-GDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 S GRV + +G+ D G D + + ++I + M R + +TGI ID Sbjct: 82 SEDMLGRVFDGMGRSNDNGPDIIP--EKRVDINGEAINPMARDFPSEFIQTGISAIDGLN 139 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFAR------SDCFDKVIISLVGERGREVREFIEDYL 210 L GQ++ VF+ SG+ L + AR SD ++ + +G E + F+E++ Sbjct: 140 TLVRGQKLPVFSASGLPHQELAAQIARQAKVLNSDSKFAIVFAAIGITFEEAQFFVEEFK 199 Query: 211 GDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIRE 268 + +SV+ + + + I R P A+T AEY + KG VL+I+ IT +A ++RE Sbjct: 200 STGAIDRSVLFMNLASDPAIERIATPRMALTCAEYLAYEKGMQVLVIMTDITNYAEALRE 259 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I+ E+P RGYP ++++L L ER G ++G+IT + + + D+ PI D Sbjct: 260 ISAARKEVPGRRGYPGYLYTDLSTLYERAGRLRGKEGSITQIPILTMPEDDKTHPIPDLT 319 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364 I +G I+L+R L ++G PP+D L S+SRL DK Sbjct: 320 GYITEGQIILSRELYKKGLMPPIDVLPSLSRLKDKG 355 >gi|149174223|ref|ZP_01852850.1| F0F1 ATP synthase subunit beta [Planctomyces maris DSM 8797] gi|148846768|gb|EDL61104.1| F0F1 ATP synthase subunit beta [Planctomyces maris DSM 8797] Length = 471 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 9/293 (3%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 GR++N G+ +D + + D I + P + R + F TGI+ ID+ +PL G Sbjct: 97 GRMLNVFGQTVDTGAPV-ECDHWRSIHHQSPALVERPPRSEIFSTGIKAIDLLSPLERGG 155 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDN-LKKSV 218 + G+F G+G+GK+ L++ + +SL +GER RE E + L+ +V Sbjct: 156 KAGLFGGAGVGKTVLITELIHNVVGAHKGVSLFCGIGERCREAEELYREMQDAGVLENTV 215 Query: 219 VVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGELP 277 +V +E P R A+T+AEYF + +VLL++D+I RF + E++ GELP Sbjct: 216 MVFGQMNEPPGARYRVGHAALTMAEYFRDDQRQDVLLLIDNIFRFIQAGTEVSGLMGELP 275 Query: 278 VARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIV 337 GY ++ S+L L ERI G+IT+V +V V D+ DP A + L +V Sbjct: 276 SRVGYQPTLASDLAELEERI--CTTTSGSITSVQAVYVPADDFTDPSAVHTFAHLSTSVV 333 Query: 338 LNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 L+R A EG YP +D L S S++ D ++ S+ + +E+ +DI Sbjct: 334 LSRRRASEGLYPAIDLLNSSSKMLMPPIVGDHHYQVAQSVRETLANYEDLKDI 386 >gi|32526543|emb|CAD39203.1| ATP synthase subunit B [Pennantia cunninghamii] Length = 489 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKQGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|50604352|gb|AAT79518.1| ATP synthase [Nothofagus truncata] gi|50604354|gb|AAT79519.1| ATP synthase [Nothofagus fusca] gi|50604366|gb|AAT79525.1| ATP synthase [Nothofagus solandri] Length = 451 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + F+TGI+V+D+ Sbjct: 67 GATLGRIFNVLGEPVD---NLGPVDASTRSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 123 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 124 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYIEMKESG 183 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 184 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 243 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 244 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 301 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 302 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 361 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 362 KELQDIIAILG 372 >gi|73667078|ref|YP_303094.1| F0F1 ATP synthase subunit beta [Ehrlichia canis str. Jake] gi|118573531|sp|Q3YS09|ATPB_EHRCJ RecName: Full=ATP synthase subunit beta; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|72394219|gb|AAZ68496.1| ATP synthase F1, beta subunit [Ehrlichia canis str. Jake] Length = 507 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 95/311 (30%), Positives = 159/311 (51%), Gaps = 24/311 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSME-IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCH 160 GRV + LG ID L + ++ I S++P +++ + TGI+VID+ P Sbjct: 116 LGRVFDVLGNTIDDCGPLEESKYIIKPIYSEIPKLTDQKIATEILVTGIKVIDLLAPYLK 175 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISL---VGERGREVREFIEDYLGDNL--- 214 G ++G+F G+G+GK+ L+ + +S+ VGER RE + + + + Sbjct: 176 GGKVGLFGGAGVGKTVLIMELIHNIAKAHRGVSVFAGVGERTREGNDLYHEMIESGVINL 235 Query: 215 -----KKSVVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIRE 268 ++V+V +E P R L+A+T+AEYF S+ +VL +D+I RF S E Sbjct: 236 NEKDQSQAVLVYGQMNEPPGARLRVALSALTMAEYFRDSENQDVLFFVDNIFRFTQSGSE 295 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 I+ G +P A GY ++ +E+ + ERI + G+IT+V ++ V D+ DP + Sbjct: 296 ISALLGRIPSAVGYQPTLAAEMGAMQERI--TSTNNGSITSVQAIYVPADDLTDPAPATS 353 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSAD-----EKKLVSSLTHLIHRF 383 + LD VL+R ++E G YP VDPL S S +A SAD ++ + ++ + Sbjct: 354 FAHLDSTTVLSRQISELGIYPAVDPLDSTS----QALSADIVGEEHYEVAKEVQRILQTY 409 Query: 384 EETRDIRLIGG 394 + +DI I G Sbjct: 410 KSLQDIIAILG 420 >gi|219552240|gb|ACL26835.1| ATP synthase beta chain [Phyllanthus amarus] Length = 423 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ Sbjct: 84 GATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 140 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 141 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 200 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 201 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 260 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 261 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 318 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 319 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRY 378 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 379 KELQDIIAILG 389 >gi|195183511|dbj|BAG66969.1| ATP synthase beta subunit [Isodendrion longifolium] Length = 489 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V + +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALIYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S L K + + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPKIVGKEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|155029325|dbj|BAF75546.1| ATP synthase beta subunit [Tragiella anomala] Length = 489 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D LG D+ + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---DLGPVDIRATSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|115564937|emb|CAJ70621.1| ATP synthase beta subunit [Matudaea trinervia] Length = 470 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/312 (31%), Positives = 158/312 (50%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 97 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 214 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQRVKQTLQR 390 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 391 YKELQDIIAILG 402 >gi|18077603|emb|CAD11918.1| ATP synthase beta subunit [Polyosma cunninghamii] Length = 487 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 94 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 150 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 210 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 211 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 270 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 328 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 329 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 388 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 389 KELQDIIAILG 399 >gi|5758878|gb|AAD50852.1| ATP synthase beta subunit [Ensete ventricosum] Length = 496 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D S I P + + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTSTTSPIHRPAPAFIQLETKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTSQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|68139361|gb|AAY86045.1| ATP synthase beta subunit [Alisma plantago-aquatica] Length = 452 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 109/365 (29%), Positives = 172/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D GQ I + ++ V + E ++ G V G + GR Sbjct: 24 KGRDTAGQQINVTCEVQQLLGNNRVRAVAMSATEGLTRGMQVIDTGAPLSVPVGGATLGR 83 Query: 105 VINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D S I P + F+TGI+V+D+ P G Sbjct: 84 IFNVLGEPVD---NLGPVDTSTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 140 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 141 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 200 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 201 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 260 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 261 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 318 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + R++E +DI Sbjct: 319 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDI 378 Query: 390 RLIGG 394 I G Sbjct: 379 IAILG 383 >gi|18077561|emb|CAC88850.1| atpD beta synthase chain [Pseudomonas fluorescens] Length = 258 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 23 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 83 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKEGSITSIQAVYVPADDL 200 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242 >gi|156618839|ref|YP_001430121.1| ATP synthase CF1 beta subunit [Cuscuta reflexa] gi|231596|sp|P30399|ATPB_CUSRE RecName: Full=ATP synthase subunit beta, plastid; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|58333|emb|CAA43866.1| H(+)-transporting ATP synthase [Cuscuta reflexa] gi|156556024|emb|CAM98407.1| ATP synthase CF1 beta chain [Cuscuta reflexa] Length = 490 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGEPVD---NLGPVDTNTTFTIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRLVGEEHYETAQKVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|332105863|gb|AEE01394.1| ATP synthase beta chain [Adansonia digitata] Length = 493 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 99 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 394 KELQDIIAILG 404 >gi|229002378|dbj|BAH57913.1| ATP synthase beta subunit [Potamogeton dentatus] gi|229002384|dbj|BAH57914.1| ATP synthase beta subunit [Potamogeton gramineus] Length = 488 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 102 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 158 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 218 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 219 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINEQDVLLFIDNIFRFVQA 278 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 336 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ ++ + + R+ Sbjct: 337 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYEIAQRVKETLQRY 395 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 396 KELQDIIAILG 406 >gi|123325691|gb|ABM74470.1| ATP synthase beta subunit [Microcitrus inodora] Length = 460 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 79 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 135 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL------ 210 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 136 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 195 Query: 211 ---GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 196 VINDQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 255 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 256 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 313 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 314 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 373 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 374 KELQDIIAILG 384 >gi|149384677|gb|ABR25147.1| ATP synthase beta chain [Marattia alata] Length = 394 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSM-EIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NLGPVDAGITSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAILG 309 >gi|4995177|emb|CAB44029.1| H(+)-transporting ATP synthase [Grewia occidentalis] Length = 484 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 93 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 149 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 209 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 210 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 269 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 327 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 328 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 387 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 388 KELQDIIAILG 398 >gi|4063530|gb|AAC98323.1| ATP synthase beta subunit [Bixa orellana] Length = 456 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 78 GTTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLT-HLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQIVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|4063542|gb|AAC98329.1| ATP synthase beta subunit [Cupaniopsis anacardioides] Length = 456 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 194 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|170178348|gb|ACB10593.1| ATP synthase beta subunit [Cornus nuttallii] Length = 454 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D GQ I + ++ V + E ++ G V G + GR Sbjct: 11 KGRDTAGQPINVTCEVQQLLGNNRVRAVAMSATEGLTRGMEVVDTGAPLSVPVGGATLGR 70 Query: 105 VINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D ++ I P + F+TGI+V+D+ P G Sbjct: 71 IFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 127 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 128 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 187 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 188 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 247 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 248 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 305 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 306 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 365 Query: 390 RLIGG 394 I G Sbjct: 366 IAILG 370 >gi|170178330|gb|ACB10584.1| ATP synthase beta subunit [Cornus peruviana] Length = 455 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 157/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 66 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 122 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 123 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 182 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 183 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 242 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 243 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 300 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R++ Sbjct: 301 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYK 360 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 361 ELQDIIAILG 370 >gi|111283708|gb|ABH09204.1| ATPase beta subunit [Jackiella curvata] Length = 444 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+PID +LG D++ + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGEPID---NLGPVDVNTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 140 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKV 199 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF +VL +D+I RF + Sbjct: 200 INEQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDINKQDVLSFIDNIFRFVQA 259 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 260 GSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 317 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R+ Sbjct: 318 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRY 376 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 377 KELQDIIAILG 387 >gi|61968321|gb|AAX57087.1| ATP synthase beta subunit [Thecacoris madagascariensis] Length = 479 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPVD---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTVQRYK 387 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 388 ELQDIIAILG 397 >gi|6687548|emb|CAB64990.1| ATP synthase beta subunit [Erithalis fruticosa] Length = 498 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|4995057|emb|CAB43981.1| H(+)-transporting ATP synthase [Abroma augustum] Length = 488 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|46360714|gb|AAS89138.1| ATP synthase beta subunit [Riccia huebeneriana subsp. sullivantii] Length = 382 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG + + + + PA + + F+TGI+V+D+ P Sbjct: 2 LGRIFNVLGEPVD---NLGPVEATTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYR 58 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG-------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 59 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVIN 118 Query: 212 -DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + Sbjct: 119 EQNISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 178 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 179 EVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 236 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 237 TFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 295 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 296 LQDIIAILG 304 >gi|3850988|gb|AAC72186.1| ATP synthase beta subunit [Grevillea baileyana] Length = 490 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|290490142|gb|ADD31478.1| ATP synthase CF1 beta subunit protein [Antirrhinum majus] Length = 498 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 155/309 (50%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G + I P + F+TGI+V+D+ P Sbjct: 104 GATLGRIFNVLGEPVDNLGPVDTGT-TFPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 162 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 222 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 223 NEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 282 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 283 SEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 340 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 341 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKETLQRYKE 400 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 401 LQDIIAILG 409 >gi|219552250|gb|ACL26840.1| ATP synthase beta chain [Phyllanthus flexuosus] Length = 423 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 85 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 380 ELQDIIAILG 389 >gi|164566059|gb|ABY61172.1| ATP synthase beta subunit [Danaea arbuscula] Length = 394 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/308 (31%), Positives = 158/308 (51%), Gaps = 20/308 (6%) Query: 102 CGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D + +S + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVDNSGPVNVDTISP--IHKSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 64 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL---------G 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 65 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINQ 124 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 +N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF + E Sbjct: 125 ENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 184 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 185 VSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATT 242 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 243 FAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEL 301 Query: 387 RDIRLIGG 394 +DI I G Sbjct: 302 QDIIAILG 309 >gi|99640456|emb|CAJ45081.1| putative beta subunit of chloroplast ATP synthase [Cyathea grandifolia] gi|99640486|emb|CAJ45085.1| putative beta subunit of chloroplast ATP synthase [Cyathea arborea] gi|99640492|emb|CAJ45086.1| putative beta subunit of chloroplast ATP synthase [Cyathea divergens] gi|99640498|emb|CAJ45087.1| putative beta subunit of chloroplast ATP synthase [Cyathea parvula] gi|99640503|emb|CAJ45088.1| putative beta subunit of chloroplast ATP synthase [Cyathea speciosa] Length = 493 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 26/314 (8%) Query: 103 GRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCH 160 GR+ N LG+P+D +LG + S + + PA + + F+TGI+V+D+ P Sbjct: 106 GRISNVLGEPVD---NLGPVESSTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAPYRR 162 Query: 161 GQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG--------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 163 GGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMETKESKVINE 222 Query: 212 DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIRE 268 N+ +S V V +E P R TA T+AEYF +VLL +D+I RF + E Sbjct: 223 QNISESKVALVYGQMNEPPGARMRVGSTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGSE 282 Query: 269 IATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSV 328 ++ SG +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 283 VSALSGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDPTDPAPATT 340 Query: 329 RSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEET 386 + LD VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 341 FAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKEP 399 Query: 387 RDIRLIGGYRPGVD 400 +DI I PG+D Sbjct: 400 QDIIAI----PGLD 409 >gi|14718013|gb|AAK72748.1| ATP synthase beta subunit [Cneorum pulverulentum] Length = 476 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/310 (32%), Positives = 159/310 (51%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ P Sbjct: 94 ATLGRIFNVLGEPVD---NLGPIDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLAP 150 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 151 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 210 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 211 INEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 270 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 271 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 328 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSR-LADKAWSADEKKLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S L + D + + + R++ Sbjct: 329 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEDHYETAQRVKQTLQRYK 388 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 389 ELQDIIAILG 398 >gi|6017802|gb|AAF01635.1| ATP synthase beta subunit [Hydrangea arborescens] Length = 496 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/309 (31%), Positives = 154/309 (49%), Gaps = 16/309 (5%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPL 158 GR+ N LG+P+D + G S I P + F+TGI+V+D+ P Sbjct: 102 GATLGRIFNVLGEPVDNXCPVDTGTTS-PIHRSAPAFIQLDTKLSIFETGIKVVDLLAPY 160 Query: 159 CHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------- 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 RRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVI 220 Query: 212 --DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSI 266 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 221 NEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAG 280 Query: 267 REIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIAD 326 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 SEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPA 338 Query: 327 SVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEE 385 + + LD VL+R LA +G YP VDPL S S + +E + + + R++E Sbjct: 339 TTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKE 398 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 399 LQDIIAILG 407 >gi|326200288|gb|ADZ52327.1| ATP synthase CF1 beta subunit [Asclepias syriaca] Length = 495 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDARTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLGTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPGIVGEEHYETAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|326803803|ref|YP_004321621.1| ATP synthase ab C terminal domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326650077|gb|AEA00260.1| ATP synthase ab C terminal domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 479 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/368 (26%), Positives = 180/368 (48%), Gaps = 17/368 (4%) Query: 43 VCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEISLGD--LVFHWGRFRISPSA 99 V + V + +N D+ +G+V+ + D + G G I++ D + F S Sbjct: 24 VGYNELVEIKMQNGDSRIGEVLEVQEDKAIVQIYGGGSGINIRDSRVRFQGHPLEFGVSE 83 Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLC 159 GR + LG +DG + + S ++ +V M R+ ++ +TGI ID L Sbjct: 84 DIIGRTFDGLGNVVDGGPT-PIPEQSRDVNGQVINPMAREYPDEFIQTGISTIDHMNSLV 142 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVREFIEDYLGDN 213 GQ++ +F+GSG+ L + AR D V+ + +G + + FI+ + Sbjct: 143 RGQKLPIFSGSGLPHKELAAQIARQATVLNDDENFAVVFAAMGVTFEDAQFFIDSFKETG 202 Query: 214 -LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIAT 271 + +SV+ + +D+ I R P A+T AEY + + D +VL+I+ +T + ++RE++ Sbjct: 203 AIDRSVMFINLADDPSIERLATPKVALTAAEYLAYEKDMHVLVIMTDMTNYCEALREVSA 262 Query: 272 NSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSI 331 E+P RGYP ++++L + ER G + KG++T + + + D+ PI D I Sbjct: 263 ARREVPGRRGYPGYLYTDLAGIYERAGRIKDAKGSVTQIPILTMPEDDITHPIPDLTGYI 322 Query: 332 LDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWS-----ADEKKLVSSLTHLIHRFEET 386 +G I+L++ L +G PP+D L S+SRL D D ++ L + +E Sbjct: 323 TEGQIILDKELNHQGITPPIDVLPSLSRLKDDGTGEGKTREDHADTMNQLFAAYAKGKEA 382 Query: 387 RDIRLIGG 394 R++ ++ G Sbjct: 383 RELAVVLG 390 >gi|295107819|emb|CBL21772.1| Archaeal/vacuolar-type H+-ATPase subunit B [Ruminococcus obeum A2-162] Length = 460 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 24/322 (7%) Query: 56 SDNLGQVIRINLDIVYICPVGIGEEISLGD----LVFHWGRFRISPSACWCGRVINALGK 111 + +G++I I D I + +SLG+ L H +SP GR N +G+ Sbjct: 38 TQKIGRIIEIYEDKAVIQVFEGTDNMSLGNTHTRLTGHPMEIGLSPE--ILGRTFNGIGQ 95 Query: 112 PIDGDDSLGKGDLSMEI---MSKVP-PAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVF 167 PIDG GD++ E+ ++ +P + R+ TGI ID T L GQ++ +F Sbjct: 96 PIDG-----LGDITPEVSLNINGLPLNPVKREYPRNYINTGISAIDGLTTLIRGQKLPIF 150 Query: 168 AGSGIGKSTLLSMFAR-------SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVV 220 +G+G+ L + + SD ++ + +G + F + VV+ Sbjct: 151 SGNGLPHDKLAAQIVQQASLGGDSDENFAIVFAAMGVKYDVAEFFRRTFEESGASDHVVM 210 Query: 221 VATSDESPIL-RKMAPLTAVTIAEYFS-SKGDNVLLILDSITRFAHSIREIATNSGELPV 278 P++ R + P A+T AEY + KG ++L+IL IT F ++RE++++ GE+P Sbjct: 211 FLNLANDPVVERLLTPKIALTAAEYLAFEKGMHILVILTDITSFCEAMREVSSSKGEIPS 270 Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338 +GYP ++SEL L ER G + G++T + + + D+ PI D I +G IVL Sbjct: 271 RKGYPGYLYSELATLYERAGIVQGGTGSVTQIPILTMPNDDITHPIPDLTGYITEGQIVL 330 Query: 339 NRSLAEEGRYPPVDPLASVSRL 360 +R L + YPP++ L S+SRL Sbjct: 331 DRQLHGQAIYPPINVLPSLSRL 352 >gi|170178350|gb|ACB10594.1| ATP synthase beta subunit [Cornus kousa] Length = 450 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P + F+TGI+V+D+ Sbjct: 65 GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 121 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 122 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 181 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 182 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 241 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 242 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 299 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 300 PATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 359 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 360 KELQDIIAILG 370 >gi|219552190|gb|ACL26810.1| ATP synthase beta chain [Glochidion acuminatum] Length = 423 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 85 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 141 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 201 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 202 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 261 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 319 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 320 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 379 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 380 ELQDIIAILG 389 >gi|61968223|gb|AAX57038.1| ATP synthase beta subunit [Breynia cernua] gi|61968225|gb|AAX57039.1| ATP synthase beta subunit [Breynia stipitata] gi|61968243|gb|AAX57048.1| ATP synthase beta subunit [Glochidion puberum] gi|61968309|gb|AAX57081.1| ATP synthase beta subunit [Sauropus androgynus] Length = 479 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 93 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 149 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 150 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 209 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 210 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 269 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 270 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 327 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 328 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 387 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 388 ELQDIIAILG 397 >gi|12004163|gb|AAG43921.1|AF213790_1 ATP synthase beta subunit [Trientalis europaea] Length = 468 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 158/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMETKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|14718265|gb|AAK72870.1| ATP synthase beta subunit [Xanthoceras sorbifolium] Length = 485 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 97 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTKLSIFETGIKVVDLLA 153 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 213 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 214 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 273 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 331 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 332 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 391 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 392 KELQDIIAILG 402 >gi|8517628|emb|CAB94373.1| ATP synthase beta subunit [Maesa myrsinoides] Length = 476 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQKVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|18077545|emb|CAC88842.1| atpD beta synthase chain [Pseudomonas chlororaphis] Length = 258 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 23 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 83 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDL 200 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242 >gi|119368010|dbj|BAF40500.1| ATP synthase beta subunit [Galearia filiformis] Length = 489 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|119368018|dbj|BAF40508.1| ATP synthase beta subunit [Breynia cernua] Length = 489 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 156/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D LG D + I P + F+TGI+V+D+ P Sbjct: 97 ATLGRIFNVLGEPVD---ELGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 153 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 154 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 213 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 214 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 273 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIA 325 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 274 GSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAP 331 Query: 326 DSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFE 384 + + LD VL+R LA +G YP VDPL S S + +E + + + R++ Sbjct: 332 ATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQKVKQTLQRYK 391 Query: 385 ETRDIRLIGG 394 E +DI I G Sbjct: 392 ELQDIIAILG 401 >gi|118917374|dbj|BAF40486.1| ATP synthase beta subunit [Sclerolinon digynum] Length = 489 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 155/311 (49%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKQGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|37543470|gb|AAM08916.1| ATP synthase beta subunit [Purdiaea nutans] Length = 462 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 22/312 (7%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGD--LSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D ++ I P + F+TGI+V+D+ Sbjct: 78 GATLGRIFNVLGEPVD---NLGPVDTRITSPIHRSAPAFIELDTKLSIFETGIKVVDLLA 134 Query: 157 PLCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGD 212 P G +IG+F G+G+GK+ L+ + A++ V + ER RE + ++ Sbjct: 135 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYKEMKES 193 Query: 213 NL--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFA 263 + K +V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 194 GVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFV 253 Query: 264 HSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDP 323 + E++ G +P A GY ++ +E+ ERI + +KG+IT++ +V V D+ DP Sbjct: 254 QAGSEVSALLGRMPSAVGYQPTLSTEMGTFQERI--TSTKKGSITSIQAVYVPADDLTDP 311 Query: 324 IADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + +E + + + R Sbjct: 312 APATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQR 371 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 372 YKELQDIIAILG 383 >gi|7687958|emb|CAB89701.1| ATP synthase beta subunit [Astilbe taquetii] Length = 498 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/326 (30%), Positives = 162/326 (49%), Gaps = 22/326 (6%) Query: 85 DLVFHWGRFRISPSACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVE 142 D++ + GR+ N LG+P+D +LG D + I P + Sbjct: 90 DVIDTGAALSVPVGGATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKL 146 Query: 143 KGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREV 202 F+TGI+V+D+ P G +IG+F G+G+GK+ L+ + +S+ G G Sbjct: 147 SIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERT 206 Query: 203 REFIEDYLG---------DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD- 250 RE + Y+ N+ +S V V +E P R LTA+T+AEYF + Sbjct: 207 REGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQ 266 Query: 251 NVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAV 310 +VLL +D+I RF + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ Sbjct: 267 DVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSI 324 Query: 311 ISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK 370 +V V D+ DP + + LD VL+R LA +G YP VDPL S S + + W E+ Sbjct: 325 QAVYVPADDLTDPAPATTFAHLDATTVLSRGLASKGIYPAVDPLDSTSTML-QPWIVGEE 383 Query: 371 --KLVSSLTHLIHRFEETRDIRLIGG 394 + + + R++E +DI I G Sbjct: 384 HYETAQRVKQTLQRYKELQDIIAILG 409 >gi|7708503|emb|CAB89932.1| ATP synthase beta subunit [Myriophyllum sibiricum] Length = 488 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 179/365 (49%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K DN GQ I + ++ V + + ++ G V G + GR Sbjct: 40 KGRDNAGQQINMTCEVQQLLGNNRVRAIAMSATDGLTRGMEVIDTGAPLSVPVGGVTLGR 99 Query: 105 VINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D ++ + + PA + + F+TGI+V+D+ P G Sbjct: 100 IFNVLGEPVD---NLGPVDTRTISPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E ++ + + R++E +DI Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRYKELQDI 394 Query: 390 RLIGG 394 I G Sbjct: 395 IAILG 399 >gi|16416740|gb|AAL18394.1|AF313546_1 ATP synthase beta chain [Marattia attenuata] Length = 394 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/309 (32%), Positives = 160/309 (51%), Gaps = 22/309 (7%) Query: 102 CGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFTPLC 159 GR+ N LG+P+D +LG D+ + + K PA + + F+TGI+V+D+ P Sbjct: 7 LGRIFNVLGEPVD---NLGPVDIGTTSPIHKSAPAFTQLDTKLSIFETGIKVVDLLAPYR 63 Query: 160 HGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYL--------- 210 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 64 RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVSGGVGERTREGNDLYMEMKESKVIN 123 Query: 211 GDNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAHSIR 267 +N+ +S V V +E P R LTA T+AEYF +VLL +D+I RF + Sbjct: 124 QENISESKVALVYGQMNEPPGARMRVGLTAPTMAEYFRDVNKQDVLLFIDNIFRFVQAGS 183 Query: 268 EIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADS 327 E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + Sbjct: 184 EVSALLGRMPSAVGYQPTLATEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPAT 241 Query: 328 VRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHRFEE 385 + D VL+R LA +G YP VDPL S S + + W E+ + + + R++E Sbjct: 242 TFAHSDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQRYKE 300 Query: 386 TRDIRLIGG 394 +DI I G Sbjct: 301 LQDIIAILG 309 >gi|1352029|sp|P07137|ATPB_IPOBA RecName: Full=ATP synthase subunit beta, chloroplastic; AltName: Full=ATP synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta gi|58336|emb|CAA29393.1| unnamed protein product [Ipomoea batatas] Length = 490 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDLSME--IMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 102 GSTLGRIFNVLGQPVD---NLGPVDTNTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + YL Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYLEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIPESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGYLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETARGVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|332105873|gb|AEE01399.1| ATP synthase beta chain [Fremontodendron californicum] Length = 493 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 99 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 155 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 156 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 215 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 216 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 275 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 276 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 333 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 334 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 393 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 394 KELQDIIAILG 404 >gi|313576715|gb|ADR66865.1| ATP synthase beta subunit [Ternstroemia stahlii] gi|313576717|gb|ADR66866.1| ATP synthase beta subunit [Ternstroemia peduncularis] Length = 477 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/365 (29%), Positives = 174/365 (47%), Gaps = 29/365 (7%) Query: 54 KNSDNLGQVIRINLDI--------VYICPVGIGEEISLGDLVFHWGR-FRISPSACWCGR 104 K D LGQ I + ++ V + + ++ G V G + GR Sbjct: 40 KGRDTLGQPINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGTPLSVPVGGATLGR 99 Query: 105 VINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162 + N LG+P+D +LG D + I P + F+TGI+V+D+ P G Sbjct: 100 IFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGG 156 Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG---------DN 213 +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ N Sbjct: 157 KIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQN 216 Query: 214 LKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHSIREIA 270 + +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + E++ Sbjct: 217 IAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVS 276 Query: 271 TNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRS 330 G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP + + Sbjct: 277 ALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPAPATTFA 334 Query: 331 ILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRFEETRDI 389 LD VL+R LA +G YP VDPL S S + +E + + + R++E +DI Sbjct: 335 HLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDI 394 Query: 390 RLIGG 394 I G Sbjct: 395 IAILG 399 >gi|198417867|gb|ACH87970.1| AtpD beta synthase chain [Pseudomonas chlororaphis] Length = 258 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 6/222 (2%) Query: 145 FKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKV---IISLVGERGRE 201 +TGI+VID+ P G ++G+F G+G+GK+ + R+ + + + VGER RE Sbjct: 23 LETGIKVIDLVCPFAKGGKVGLFGGAGVGKTVNMMELIRNIAIEHSGYSVFAGVGERTRE 82 Query: 202 VREFIEDYLGDN-LKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260 +F + N L K +V +E P R LT +T+AE F +G++VLL +D+I Sbjct: 83 GNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEKFRDEGNDVLLFVDNIY 142 Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320 R+ + E++ G +P A GY ++ E+ L ERI + ++G+IT++ +V V D+ Sbjct: 143 RYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERI--TSTKQGSITSIQAVYVPADDL 200 Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLAD 362 DP + + LD +VL+R +A G YP VDPL S SR D Sbjct: 201 TDPSPATTFAHLDATVVLSRDIASLGIYPAVDPLDSTSRQLD 242 >gi|123325657|gb|ABM74453.1| ATP synthase beta subunit [Clymenia polyandra] Length = 461 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 85 GVTLGRIFNVLGEPVD---NLGPVDTRTTSPIHKSAPAFIQLDTRLSIFETGIKVVDLLA 141 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 142 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 201 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 202 VINEQNLSESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 261 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 262 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 319 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 320 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 379 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 380 KELQDIIAILG 390 >gi|194267337|gb|ACF35655.1| ATP synthase beta subunit [Roupala montana] Length = 497 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 104 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 160 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 161 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 220 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 221 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 280 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 281 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 338 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 339 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 398 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 399 KELQDIIAILG 409 >gi|113910906|gb|ABI48185.1| ATPase beta subunit [Hylocomium splendens] Length = 472 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 102/312 (32%), Positives = 162/312 (51%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDLSMEI-MSKVPPAMNRQRVEKG-FKTGIRVIDIFTP 157 GR+ N LG+ +D +LG D S + + PA + + F+TGI+V+D+ P Sbjct: 83 ATLGRIFNVLGETVD---NLGPVDASTTFPIHRSAPAFTQLDTKLSIFETGIKVVDLLAP 139 Query: 158 LCHGQRIGVFAGSGIGKST----LLSMFARSDCFDKVIISLVGERGRE----VREFIEDY 209 G +IG+F G+G+GK+ L++ A++ V + ER RE E E Sbjct: 140 YRRGGKIGLFGGAGVGKTVPIMELINNIAKAHGGVSVSGGVG-ERTREGNDLYMEMKESK 198 Query: 210 LGD--NLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + D N+ +S V V +E P R LTA+T+AEYF +VLL +D+I RF Sbjct: 199 VIDEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQ 258 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 259 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 316 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 317 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKQTLQR 375 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 376 YKELQDIIAILG 387 >gi|7708570|emb|CAB89977.1| ATP synthase beta subunit [Reinwardtia indica] Length = 491 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID LG D + I P + F+TGI+V+D+ Sbjct: 102 GATLGRIFNVLGEPID---DLGPVDTRTTSPIHRPAPAFIQLDTKLSIFETGIKVVDLLA 158 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 159 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 218 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 219 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 278 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 279 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 336 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 337 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRY 396 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 397 KELQDIIAILG 407 >gi|4995111|emb|CAB43998.1| H(+)-transporting ATP synthase [Colona floribunda] Length = 487 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 100/311 (32%), Positives = 159/311 (51%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL-SMEIMSKVPPAMNRQRVEKG-FKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + + K PA + + F+TGI+V+D+ Sbjct: 95 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHKPAPAFIQLDTKLSIFETGIKVVDLLA 151 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 152 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 211 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 NL +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 212 VINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 271 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 272 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKEGSITSIQAVYVPADDLTDPA 329 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 330 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 389 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 390 KELQDIIAILG 400 >gi|7708678|emb|CAB90018.1| ATP synthase beta subunit [Thymelaea hirsuta] Length = 471 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 22/311 (7%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ P Sbjct: 79 ATLGRIFNVLGEPID---NLGPVDTRTTAPIHKSAPAFIQLDTKLSIFETGIKVVDLLAP 135 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 136 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYMEMKESG 194 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 + K +V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 195 VINEKDLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 254 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 255 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDXTDPA 312 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 313 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 372 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 373 KELQDIIAILG 383 >gi|16416738|gb|AAL18393.1|AF313545_1 ATP synthase beta chain [Tmesipteris obliqua] gi|184127881|gb|ACC67840.1| ATP synthase beta chain [Tmesipteris obliqua] Length = 394 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 153/312 (49%), Gaps = 24/312 (7%) Query: 100 CWCGRVINALGKPIDGDDSLG--KGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D I P F+TGI+V+D+ P Sbjct: 5 ATLGRIFNVLGEPVD---NLGPINADKKSPIHEPAPAFTQLDTKLSIFETGIKVVDLLAP 61 Query: 158 LCHGQRIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN 213 G +IG+F G+G+GK+ L+ + A++ V + ER RE + + Sbjct: 62 YRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVG-ERTREGNDLYTEMKESK 120 Query: 214 L--------KKSVVVVATSDESPILRKMAPLTAVTIAEYFSS-KGDNVLLILDSITRFAH 264 + K +V +E P R LTA+TIAEYF +VLL +D+I RF Sbjct: 121 VINEQNISESKVALVYGQMNEPPGARMRVGLTALTIAEYFRDVNKQDVLLFIDNIFRFVQ 180 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + +G+IT++ +V V D+ DP Sbjct: 181 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTREGSITSIQAVYVPADDLTDPA 238 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK--KLVSSLTHLIHR 382 + + LD VL+R LA +G YP VDPL S S + + W E+ + + + R Sbjct: 239 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTML-QPWIVGEEHYETAQGVKKTLQR 297 Query: 383 FEETRDIRLIGG 394 ++E +DI I G Sbjct: 298 YKELQDIIAILG 309 >gi|62902857|gb|AAY19343.1| ATP synthase beta subunit [Davidsonia pruriens] Length = 460 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 70 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 126 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 127 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 186 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 187 VINEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 246 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 247 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 304 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 305 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 364 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 365 KELQDIIAILG 375 >gi|32526541|emb|CAD39202.1| ATP synthase subunit B [Pennantia corymbosa] Length = 489 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/311 (31%), Positives = 157/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ Sbjct: 96 GATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLA 152 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 153 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 212 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 213 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 272 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 273 AGSEVSALLGRMPSAVGYQPTLSTEMGTLQERI--TSTKQGSITSIQAVYVPADDLTDPA 330 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E ++ + + R+ Sbjct: 331 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQRY 390 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 391 KELQDIIAILG 401 >gi|7708499|emb|CAB89937.1| ATP synthase beta subunit [Morus nigra] Length = 486 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 20/311 (6%) Query: 99 ACWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFT 156 GR+ N LG+PID +LG D + I P + F+TGI+V+D+ Sbjct: 103 GATLGRIFNVLGEPID---NLGPVDTRTTSPIHRSAPAFIQLDTXLSIFETGIKVVDLLA 159 Query: 157 PLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG----- 211 P G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 160 PYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESG 219 Query: 212 ----DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAH 264 N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF Sbjct: 220 VINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQ 279 Query: 265 SIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI 324 + E++ G +P A GY ++ +E+ L ERI + ++G+IT++ +V V D+ DP Sbjct: 280 AGSEVSALLGRMPSAVGYQPTLSTEMGSLQERI--TSTKEGSITSIQAVYVPADDLTDPA 337 Query: 325 ADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEK-KLVSSLTHLIHRF 383 + + LD VL+R LA +G YP VDPL S S + +E + + + R+ Sbjct: 338 PATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY 397 Query: 384 EETRDIRLIGG 394 +E +DI I G Sbjct: 398 KELQDIIAILG 408 >gi|12004131|gb|AAG43905.1|AF213774_1 ATP synthase beta subunit [Anagallis arvensis] Length = 413 Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 158/310 (50%), Gaps = 20/310 (6%) Query: 100 CWCGRVINALGKPIDGDDSLGKGDL--SMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTP 157 GR+ N LG+P+D +LG D + I P + F+TGI+V+D+ P Sbjct: 31 ATLGRIFNVLGEPVD---NLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAP 87 Query: 158 LCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIEDYLG------ 211 G +IG+F G+G+GK+ L+ + +S+ G G RE + Y+ Sbjct: 88 YRRGGKIGLFGGAGVGKTVLIMELITNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGV 147 Query: 212 ---DNLKKSVV--VVATSDESPILRKMAPLTAVTIAEYFSSKGD-NVLLILDSITRFAHS 265 +N+ +S V V +E P R LTA+T+AEYF + +VLL +D+I RF + Sbjct: 148 INEENIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQA 207 Query: 266 IREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPI