RPSBLAST alignment for GI: 254780684 and conserved domain: smart00382
>gnl|CDD|128665 smart00382, AAA, ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment. Length = 148
Score = 41.6 bits (97), Expect = 5e-04
Identities = 36/184 (19%), Positives = 57/184 (30%), Gaps = 37/184 (20%)
Query: 160 HGQRIGVFAGSGIGKSTLLSMFAR-SDCFDKVIISLVGERGREVREFIEDYLGDNLKKSV 218
G+ I + G GK+TL AR +I + GE E + KK+
Sbjct: 1 PGEVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKAS 60
Query: 219 VVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPV 278
+ A+ +A +LILD IT + +E
Sbjct: 61 GSGE----------LRLRLALALARKLKPD----VLILDEITSLLDAEQEAL-------- 98
Query: 279 ARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVL 338
L R+ K + N+T +++ + D +R D IVL
Sbjct: 99 ----------LLLLEELRLLLLLKSEKNLTVILTTNDE----KDLGPALLRRRFDRRIVL 144
Query: 339 NRSL 342
L
Sbjct: 145 LLIL 148