RPSBLAST alignment for GI: 254780684 and conserved domain: TIGR01040

>gnl|CDD|162169 TIGR01040, V-ATPase_V1_B, V-type (H+)-ATPase V1, B subunit. This models eukaryotic vacuolar (H+)-ATPase that is responsible for acidifying cellular compartments. This enzyme shares extensive sequence similarity with archaeal ATP synthase. Length = 466

 Score =  106 bits (267), Expect = 1e-23
 Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 32/286 (11%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GRV N  GKPID    +   D  ++I  +      R   E+  +TGI  ID+   +  GQ
Sbjct: 84  GRVFNGSGKPIDKGPPVLAEDY-LDINGQPINPYARIYPEEMIQTGISAIDVMNSIARGQ 142

Query: 163 RIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGREVREFIED-------YLGDNLK 215
           +I +F+ +G+  + + +   R          LV    ++V +  ED        +G N++
Sbjct: 143 KIPIFSAAGLPHNEIAAQICRQAG-------LVKLPTKDVHDGHEDNFAIVFAAMGVNME 195

Query: 216 ----------------KSVVVVATSDESPILRKMAPLTAVTIAEYFS-SKGDNVLLILDS 258
                           +  + +  +++  I R + P  A+T AEY +     +VL+IL  
Sbjct: 196 TARFFKQDFEENGSMERVCLFLNLANDPTIERIITPRLALTTAEYLAYQCEKHVLVILTD 255

Query: 259 ITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGD 318
           ++ +A ++RE++    E+P  RG+P  ++++L  + ER G  E   G+IT +  + +  D
Sbjct: 256 MSSYADALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPND 315

Query: 319 NHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKA 364
           +   PI D    I +G I ++R L     YPP++ L S+SRL   A
Sbjct: 316 DITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSA 361