RPSBLAST alignment for GI: 254780684 and conserved domain: TIGR03496
>gnl|CDD|163292 TIGR03496, FliI_clade1, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. Length = 411
Score = 522 bits (1346), Expect = e-149
Identities = 170/412 (41%), Positives = 246/412 (59%), Gaps = 6/412 (1%)
Query: 24 GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEIS 82
G ++ + + L +G + + D +V+ D V + P+ E +
Sbjct: 1 GRVTRVVGLVLEAVGL--RAPVGSRCEIESSDGDPIEAEVVGFRGDRVLLMPLEDVEGLR 58
Query: 83 LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
G VF R+ GRVI+ LG+P+DG L G+ + + + + R +
Sbjct: 59 PGARVFPLEGPLRLPVGDSLLGRVIDGLGRPLDGKGPLDAGE-RVPLYAPPINPLKRAPI 117
Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
++ G+R I+ + GQR+G+FAGSG+GKSTLL M AR D V++ L+GERGRE
Sbjct: 118 DEPLDVGVRAINGLLTVGRGQRMGIFAGSGVGKSTLLGMMARYTEADVVVVGLIGERGRE 177
Query: 202 VREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
V+EFIED LG + L +SVVV AT+DESP++R A A IAEYF +G +VLL++DS+T
Sbjct: 178 VKEFIEDILGEEGLARSVVVAATADESPLMRLRAAFYATAIAEYFRDQGKDVLLLMDSLT 237
Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
RFA + REIA GE P +GYP SVF++LP+L+ER G E+ KG+ITA +VLV+GD+
Sbjct: 238 RFAMAQREIALAIGEPPATKGYPPSVFAKLPQLVERAGNGEEGKGSITAFYTVLVEGDDQ 297
Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
DPIAD+ R+ILDGHIVL+R LAE+G YP +D LAS+SR+ S + ++ L+
Sbjct: 298 QDPIADAARAILDGHIVLSRELAEQGHYPAIDILASISRVMPDVVSPEHRQAARRFKQLL 357
Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
R++E RD+ IG Y+ G D LD+A+ P I FL+Q + +S + E
Sbjct: 358 SRYQENRDLISIGAYQAGSDPELDQAIALYPRIEAFLQQGMRERASFEESLE 409