RPSBLAST alignment for GI: 254780684 and conserved domain: TIGR03496

>gnl|CDD|163292 TIGR03496, FliI_clade1, flagellar protein export ATPase FliI. Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. Length = 411
 Score =  522 bits (1346), Expect = e-149
 Identities = 170/412 (41%), Positives = 246/412 (59%), Gaps = 6/412 (1%)

Query: 24  GYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN-LGQVIRINLDIVYICPVGIGEEIS 82
           G ++ +  +      L     +G     +  + D    +V+    D V + P+   E + 
Sbjct: 1   GRVTRVVGLVLEAVGL--RAPVGSRCEIESSDGDPIEAEVVGFRGDRVLLMPLEDVEGLR 58

Query: 83  LGDLVFHWGR-FRISPSACWCGRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRV 141
            G  VF      R+       GRVI+ LG+P+DG   L  G+  + + +     + R  +
Sbjct: 59  PGARVFPLEGPLRLPVGDSLLGRVIDGLGRPLDGKGPLDAGE-RVPLYAPPINPLKRAPI 117

Query: 142 EKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARSDCFDKVIISLVGERGRE 201
           ++    G+R I+    +  GQR+G+FAGSG+GKSTLL M AR    D V++ L+GERGRE
Sbjct: 118 DEPLDVGVRAINGLLTVGRGQRMGIFAGSGVGKSTLLGMMARYTEADVVVVGLIGERGRE 177

Query: 202 VREFIEDYLG-DNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSIT 260
           V+EFIED LG + L +SVVV AT+DESP++R  A   A  IAEYF  +G +VLL++DS+T
Sbjct: 178 VKEFIEDILGEEGLARSVVVAATADESPLMRLRAAFYATAIAEYFRDQGKDVLLLMDSLT 237

Query: 261 RFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNH 320
           RFA + REIA   GE P  +GYP SVF++LP+L+ER G  E+ KG+ITA  +VLV+GD+ 
Sbjct: 238 RFAMAQREIALAIGEPPATKGYPPSVFAKLPQLVERAGNGEEGKGSITAFYTVLVEGDDQ 297

Query: 321 NDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSLTHLI 380
            DPIAD+ R+ILDGHIVL+R LAE+G YP +D LAS+SR+     S + ++       L+
Sbjct: 298 QDPIADAARAILDGHIVLSRELAEQGHYPAIDILASISRVMPDVVSPEHRQAARRFKQLL 357

Query: 381 HRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLKQSPSDLSSEDVFQE 432
            R++E RD+  IG Y+ G D  LD+A+   P I  FL+Q   + +S +   E
Sbjct: 358 SRYQENRDLISIGAYQAGSDPELDQAIALYPRIEAFLQQGMRERASFEESLE 409