RPSBLAST alignment for GI: 254780684 and conserved domain: PRK06002

>gnl|CDD|168339 PRK06002, fliI, flagellum-specific ATP synthase; Validated. Length = 450
 Score =  789 bits (2039), Expect = 0.0
 Identities = 265/440 (60%), Positives = 326/440 (74%), Gaps = 2/440 (0%)

Query: 1   MQKNLETLAQLAEDY--SKNLVVQGGYISSITSVYYTVTCLSQYVCLGDFVVHQGKNSDN 58
               L  LA L E Y   + LV  GG +S +T+ +Y V  LS++V LGDFV  +     +
Sbjct: 3   PDNALARLAALVERYAAPEPLVRIGGTVSEVTASHYRVRGLSRFVRLGDFVAIRADGGTH 62

Query: 59  LGQVIRINLDIVYICPVGIGEEISLGDLVFHWGRFRISPSACWCGRVINALGKPIDGDDS 118
           LG+V+R++ D V + P     EI LGD VF  G  RI P   W GRVINALG+PIDG   
Sbjct: 63  LGEVVRVDPDGVTVKPFEPRIEIGLGDAVFRKGPLRIRPDPSWKGRVINALGEPIDGLGP 122

Query: 119 LGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQRIGVFAGSGIGKSTLL 178
           L  G   M I +  PPAM R RVE G +TG+RVIDIFTPLC GQRIG+FAGSG+GKSTLL
Sbjct: 123 LAPGTRPMSIDATAPPAMTRARVETGLRTGVRVIDIFTPLCAGQRIGIFAGSGVGKSTLL 182

Query: 179 SMFARSDCFDKVIISLVGERGREVREFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTA 238
           +M AR+D FD V+I+LVGERGREVREF+ED L DNLKK+V VVATSDESP++R++APLTA
Sbjct: 183 AMLARADAFDTVVIALVGERGREVREFLEDTLADNLKKAVAVVATSDESPMMRRLAPLTA 242

Query: 239 VTIAEYFSSKGDNVLLILDSITRFAHSIREIATNSGELPVARGYPTSVFSELPRLLERIG 298
             IAEYF  +G+NVLLI+DS+TRFAH+ RE+A  +GE PVARGYP SVFSELPRLLER G
Sbjct: 243 TAIAEYFRDRGENVLLIVDSVTRFAHAAREVALAAGEPPVARGYPPSVFSELPRLLERAG 302

Query: 299 PSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVS 358
           P  +  G+IT + SVLVDGD+HNDP+ADS+R  LDGHIVL+R++AE+GRYP VDPLAS+S
Sbjct: 303 PGAEGGGSITGIFSVLVDGDDHNDPVADSIRGTLDGHIVLDRAIAEQGRYPAVDPLASIS 362

Query: 359 RLADKAWSADEKKLVSSLTHLIHRFEETRDIRLIGGYRPGVDLILDKAVHQVPIIYDFLK 418
           RLA  AW+ +++KLVS L  +I RFEETRD+RLIGGYR G D  LD+AV  VP IY+ L+
Sbjct: 363 RLARHAWTPEQRKLVSRLKSMIARFEETRDLRLIGGYRAGSDPDLDQAVDLVPRIYEALR 422

Query: 419 QSPSDLSSEDVFQEITKKLQ 438
           QSP D  S+D F ++   L+
Sbjct: 423 QSPGDPPSDDAFADLAAALK 442