RPSBLAST alignment for GI: 254780684 and conserved domain: cd01128

>gnl|CDD|29994 cd01128, rho_factor, Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase. It is a homohexamer. Each monomer consists of an N-terminal domain of the OB fold, which is responsible for binding to cysteine rich nucleotides. This alignment is of the C-terminal ATP binding domain.. Length = 249
 Score = 76.4 bits (188), Expect = 1e-14
 Identities = 66/256 (25%), Positives = 114/256 (44%), Gaps = 29/256 (11%)

Query: 150 RVIDIFTPLCHGQRIGVFAGSGIGKSTLLSMFARS------DCFDKVIISLVGERGREVR 203
           RV+D+F P+  GQR  + A    GK+TLL   A +      + +  +I+ L+ ER  EV 
Sbjct: 5   RVVDLFAPIGKGQRGLIVAPPKAGKTTLLQSIANAITKNHPEVY--LIVLLIDERPEEVT 62

Query: 204 EFIEDYLGDNLKKSVVVVATSDESPILRKMAPLTAVTIAEYFSSKGDNVLLILDSITRFA 263
           +      G+      V+ +T DE P          +  A+     G +V+++LDSITR A
Sbjct: 63  DMQRSVKGE------VIASTFDEPPERHVQVAEMVLEKAKRLVEHGKDVVILLDSITRLA 116

Query: 264 HSIREIATNSGEL------PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVD- 316
            +   +   SG++        A   P   F    R +E       E G++T + + LVD 
Sbjct: 117 RAYNTVVPPSGKILSGGVDANALHKPKRFFGA-ARNIE-------EGGSLTIIATALVDT 168

Query: 317 GDNHNDPIADSVRSILDGHIVLNRSLAEEGRYPPVDPLASVSRLADKAWSADEKKLVSSL 376
           G   +D I +  +   +  +VL+R LAE   +P +D L S +R  +     +E + +  L
Sbjct: 169 GSRMDDVIFEEFKGTGNMELVLDRRLAERRIFPAIDILKSGTRKEELLLDPEELQRMWLL 228

Query: 377 THLIHRFEETRDIRLI 392
             ++   +    +  +
Sbjct: 229 RRVLSDMDPIEAMEFL 244