RPSBLAST alignment for GI: 254780684 and conserved domain: cd01133
>gnl|CDD|29999 cd01133, F1-ATPase_beta, F1 ATP synthase beta subunit, nucleotide-binding domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The beta subunit of ATP synthase is catalytic.. Length = 274
Score = 174 bits (442), Expect = 6e-44
Identities = 95/266 (35%), Positives = 146/266 (54%), Gaps = 10/266 (3%)
Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
GR+ N LG+PID + K + I + P + + + +TGI+VID+ P G
Sbjct: 12 GRIFNVLGEPIDERGPI-KTKKTWPIHREAPEFVEQSTKTEILETGIKVIDLLAPYAKGG 70
Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
+IG+F G+G+GK+ L+ + A++ V VGER RE + + L K+
Sbjct: 71 KIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMKESGVLSKT 129
Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
+V +E P R LT +T+AEYF +G +VLL +D+I RF + E++ G +
Sbjct: 130 ALVYGQMNEPPGARARVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRM 189
Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
P A GY ++ +E+ L ERI + +KG+IT+V +V V D+ DP + + LD
Sbjct: 190 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 247
Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD 362
VL+R++AE G YP VDPL S SR+ D
Sbjct: 248 VLSRAIAELGIYPAVDPLDSTSRILD 273