RPSBLAST alignment for GI: 254780684 and conserved domain: cd01133

>gnl|CDD|29999 cd01133, F1-ATPase_beta, F1 ATP synthase beta subunit, nucleotide-binding domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The beta subunit of ATP synthase is catalytic.. Length = 274
 Score =  174 bits (442), Expect = 6e-44
 Identities = 95/266 (35%), Positives = 146/266 (54%), Gaps = 10/266 (3%)

Query: 103 GRVINALGKPIDGDDSLGKGDLSMEIMSKVPPAMNRQRVEKGFKTGIRVIDIFTPLCHGQ 162
           GR+ N LG+PID    + K   +  I  + P  + +    +  +TGI+VID+  P   G 
Sbjct: 12  GRIFNVLGEPIDERGPI-KTKKTWPIHREAPEFVEQSTKTEILETGIKVIDLLAPYAKGG 70

Query: 163 RIGVFAGSGIGKSTLL----SMFARSDCFDKVIISLVGERGREVREFIEDYLGDN-LKKS 217
           +IG+F G+G+GK+ L+    +  A++     V    VGER RE  +   +      L K+
Sbjct: 71  KIGLFGGAGVGKTVLIMELINNIAKAHGGYSVFAG-VGERTREGNDLYHEMKESGVLSKT 129

Query: 218 VVVVATSDESPILRKMAPLTAVTIAEYF-SSKGDNVLLILDSITRFAHSIREIATNSGEL 276
            +V    +E P  R    LT +T+AEYF   +G +VLL +D+I RF  +  E++   G +
Sbjct: 130 ALVYGQMNEPPGARARVALTGLTMAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRM 189

Query: 277 PVARGYPTSVFSELPRLLERIGPSEKEKGNITAVISVLVDGDNHNDPIADSVRSILDGHI 336
           P A GY  ++ +E+  L ERI  +  +KG+IT+V +V V  D+  DP   +  + LD   
Sbjct: 190 PSAVGYQPTLATEMGALQERI--TSTKKGSITSVQAVYVPADDLTDPAPATTFAHLDATT 247

Query: 337 VLNRSLAEEGRYPPVDPLASVSRLAD 362
           VL+R++AE G YP VDPL S SR+ D
Sbjct: 248 VLSRAIAELGIYPAVDPLDSTSRILD 273