HHsearch alignment for GI: 254780685 and conserved domain: PRK05681
>PRK05681 flgC flagellar basal body rod protein FlgC; Reviewed.
Probab=99.79 E-value=5.3e-19 Score=131.54 Aligned_cols=47 Identities=17% Similarity=0.341 Sum_probs=43.7
Q ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 24222140239999999999999999999999999999999999853
Q gi|254780685|r 196 RGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNIA 242 (243)
Q Consensus 196 qG~LE~SNVn~~~EMv~lI~~qRafe~~~k~i~~~de~~~~~in~lg 242 (243)
T Consensus 92 ~GyV~~pNVd~~~Emvdm~~A~R~YeAN~~~~~~~k~m~~~~L~igk 138 (139)
T PRK05681 92 KGYVKYPNVNVVVEMVDMISASRSYEANVEVLNAAKSMMQKTLTIGQ 138 (139)
T ss_pred CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 67154289888999999999999999999999999999999998743