HHsearch alignment for GI: 254780685 and conserved domain: PRK08147
>PRK08147 flgK flagellar hook-associated protein FlgK; Validated.
Probab=98.58 E-value=2.8e-08 Score=68.28 Aligned_cols=42 Identities=12% Similarity=0.085 Sum_probs=38.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 222140239999999999999999999999999999999999
Q gi|254780685|r 198 FLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIR 239 (243)
Q Consensus 198 ~LE~SNVn~~~EMv~lI~~qRafe~~~k~i~~~de~~~~~in 239 (243)
T Consensus 504 r~svSGVnlDEE~~nLi~~Q~aY~AsArvist~demldtLln 545 (547)
T PRK08147 504 QQSVSGVNLDEEYGNLQRFQQYYLANAQVLQTASTLFDALLN 545 (547)
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 984317669999999999999999999999999999999877