HHsearch alignment for GI: 254780685 and conserved domain: PRK12619
>PRK12619 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.93 E-value=1.3e-09 Score=76.12 Aligned_cols=47 Identities=36% Similarity=0.528 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 13699999999999998799977543177711334678799997420
Q gi|254780685|r 2 QTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAI 48 (243)
Q Consensus 2 ~~~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~~~~~~~ 48 (243)
T Consensus 6 d~~~gi~~~aL~~r~~Rq~via~NIANadTPgYKakdv~Fe~~L~~a 52 (130)
T PRK12619 6 DSYFGIHAKALIARDQRASVLANNIANVNTPNFKARDVDFNEVLTAT 52 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf 87866779999999999999986232168999864448899999998