HHsearch alignment for GI: 254780685 and conserved domain: PRK12621
>PRK12621 flgB flagellar basal body rod protein FlgB; Provisional.
Probab=98.83 E-value=3.8e-09 Score=73.39 Aligned_cols=47 Identities=19% Similarity=0.230 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf 36999999999999987999775431777113346787999974204
Q gi|254780685|r 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIK 49 (243)
Q Consensus 3 ~~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~~~~~~~~ 49 (243)
T Consensus 7 ~~i~ll~~aLd~~~~Rq~via~NIANadTPgYKardv~Fe~~L~~a~ 53 (136)
T PRK12621 7 PHVNLVGKVMDMQLQRQNVVMSNIANVRTPGYKPRELEFEKQLQSAL 53 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 79999999999999999999971320589998744187899999987