HHsearch alignment for GI: 254780685 and conserved domain: PRK12715
>PRK12715 flgK flagellar hook-associated protein FlgK; Provisional.
Probab=98.30 E-value=1.4e-06 Score=58.18 Aligned_cols=40 Identities=23% Similarity=0.449 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 3699999999999998799977543177711334678799
Q gi|254780685|r 3 TSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFS 42 (243)
Q Consensus 3 ~~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~ 42 (243)
T Consensus 2 sllnig~sgL~a~Q~al~vt~~NIAN~nT~GYsRq~v~~~ 41 (649)
T PRK12715 2 SILNIAYSGLNAFQRALDVTGNNIANFKTRGYSRQSIQFT 41 (649)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf 7688999999999999988705255268998041466642