HHsearch alignment for GI: 254780685 and conserved domain: PRK12818

>PRK12818 flgG flagellar basal body rod protein FlgG; Reviewed.
Probab=100.00  E-value=0  Score=448.67  Aligned_cols=236  Identities=24%  Similarity=0.364  Sum_probs=204.5

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH---HHHHHHHHHCCC----------CCCCCCCCCCCCCCCC
Q ss_conf             913699999999999998799977543177711334678---799997420467----------6555532111100002
Q gi|254780685|r    1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKV---KFSEVVGAIKND----------IDQKISFVASGKEYLS   67 (243)
Q Consensus         1 M~~~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~---~F~~~~~~~~~~----------~~~~~~~~~~~~~~~~   67 (243)
T Consensus         1 M~~~ly~a~sgm~a~~~~ldviaNNlAN~nT~GfK~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   80 (255)
T PRK12818          1 MIRGLYTAVSGMITLEAKQDVITNNLANVNTVGYKSDNLAFKSFEDVLIENYDKKVGNKNIKNIIGGLSMGSKIDEVNTL   80 (255)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
T ss_conf             96689999999999998778998999877756448585006568999864104446786666644541452264356764


Q ss_pred             CCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEECCCCEECCCCCEECCCCCCCCCCCCCC-----CCCCCCCCCCCCC
Q ss_conf             24555445564021343275024413676312321122015656845414688535664544-----2100000000000
Q gi|254780685|r   68 KEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGKYPVLDMASV-----PIQIPQKDEIFNV  142 (243)
Q Consensus        68 ~~~G~l~~Tg~~lD~Ai~G~GfF~V~~~~g~~yTR~G~F~~d~~G~Lvt~~G~~~vl~~~g~-----pI~ip~~~~~~~i  142 (243)
T Consensus        81 ~~qG~l~~Tg~~lDlAI~G~GfF~V~~~g~~~yTR~G~f~vd~~G~Lvt~~G-~~vLg~~~~~~~~~pi~~~--~~~i~i  157 (255)
T PRK12818         81 FTQGIIKSTDKPTDFAIQGRGFFTVERNGRNYYTRDGHFHVDTQGYLVNDSG-YYVMGINNATGAREPIYVG--NKKFST  157 (255)
T ss_pred             CCCCCEEECCCCCEEEECCCCEEEEECCCCEEEEECCCEEECCCCCEECCCC-CEEECCCCCCCCCCCEECC--CCCEEE
T ss_conf             2787845459810499869858999559965899756577989976892899-8920788887775665148--980898


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             02454223432112334545576134432025653456665654345664156242221402399999999999999999
Q gi|254780685|r  143 GEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPNIPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNS  222 (243)
Q Consensus       143 ~~dG~i~~~g~~v~~l~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~qG~LE~SNVn~~~EMv~lI~~qRafe~  222 (243)
T Consensus       158 ~~dG~i~~~~~~~~~l~~~~~~~~~~L~~~G~~lf~~~~---~-~~~~~~~v~qG~LE~SNVn~~~EM~~mI~~qRafe~  233 (255)
T PRK12818        158 DASGNISLDGVPSYKFQVADFNDYNSLKKIGDNLYSGNN---P-INNNGAIVRQNSLEKSNVNVTNEMVNMMTTMRSFET  233 (255)
T ss_pred             CCCCEEEECCCCCEEEEEEECCCHHHCEECCCCCCCCCC---C-CCCCCCEEEECCEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf             898259855754126899814880436376887513798---7-757773387264100126899999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC
Q ss_conf             999999999999999998539
Q gi|254780685|r  223 ITTLIDENEKSMLEAIRNIAS  243 (243)
Q Consensus       223 ~~k~i~~~de~~~~~in~lgs  243 (243)
T Consensus       234 ~~k~i~t~De~~~~a~n~lg~  254 (255)
T PRK12818        234 NQKIVQSIDETLGKAVNEVGS  254 (255)
T ss_pred             HHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999999999999997436