HHsearch alignment for GI: 254780685 and conserved domain: TIGR01395
>TIGR01395 FlgC flagellar basal-body rod protein FlgC; InterPro: IPR006299 These sequences represent FlgC, one of several components of bacterial flagella. FlgC is part of the basal body. ; GO: 0019861 flagellum.
Probab=99.68 E-value=1.3e-16 Score=117.49 Aligned_cols=45 Identities=18% Similarity=0.344 Sum_probs=42.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 422214023999999999999999999999999999999999985
Q gi|254780685|r 197 GFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRNI 241 (243)
Q Consensus 197 G~LE~SNVn~~~EMv~lI~~qRafe~~~k~i~~~de~~~~~in~l 241 (243)
T Consensus 102 GYV~~PNVn~~~EMVdmi~A~RsYeANv~v~~~~K~m~~~tL~~~ 146 (147)
T TIGR01395 102 GYVKMPNVNVVEEMVDMIEASRSYEANVQVFNTAKSMLLRTLEIG 146 (147)
T ss_pred CCEECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 847058558543232112002478899999999999999999970