HHsearch results for GI: 254780685 and protein with PDBid: 3a69_A
>3a69_A Flagellar HOOK protein FLGE; the bacterial flagellar motor, universal joint, bacterial flagellum, motor protein; 7.10A {Salmonella enterica subsp}
Probab=100.00 E-value=0 Score=310.10 Aligned_cols=230 Identities=20% Similarity=0.316 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 69999999999999879997754317771133467879999742046765555321111000022455544556402134
Q gi|254780685|r 4 SFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVASGKEYLSKEVGSFISTGTELDFA 83 (243)
Q Consensus 4 ~~y~a~sg~~a~~~~ldvisNNlAN~~T~GfK~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~Tg~~lD~A 83 (243)
+||+|+|||.|+|++|+|++|||||+|||||||.++.|++++.. .....+|........|.||.++.|++++|+|
T Consensus 1 s~~~a~sGl~A~q~al~vts~NIANaNT~GYsRq~v~f~~~~~~-----~~~G~GV~v~~v~r~~~qg~~~~t~~~~d~a 75 (402)
T 3a69_A 1 SFSQAVSGLNAAATNLDVIGNNIANSATYGFKSGTASFADMFAG-----SKVGLGVKVAGITQDFTDGTTTNTGRGLDVA 75 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHC---------------------------------------------------CEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHCC-----CCCCCCEEEEEEEEECCCCCEEECCCCCHHE
T ss_conf 97899999999997357888889877764206570207776466-----8776744776789841456457647600301
Q ss_pred ECCCCEEEECCCCC-EEEEECCCCEECCCCCEECCCCCCCCCCCC-------------CCCCCC----------------
Q ss_conf 32750244136763-123211220156568454146885356645-------------442100----------------
Q gi|254780685|r 84 LEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMA-------------SVPIQI---------------- 133 (243)
Q Consensus 84 i~G~GfF~V~~~~g-~~yTR~G~F~~d~~G~Lvt~~G~~~vl~~~-------------g~pI~i---------------- 133 (243)
|.|+|||.+..++| .+|||.|+|.+|.+|+||+..|. .|++.. -.+|.+
T Consensus 76 i~~~g~f~~~~~~g~~~~tr~g~~~~~~~g~lvn~~g~-~l~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~t~~~~~~ 154 (402)
T 3a69_A 76 ISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGM-QLTGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTTASMQ 154 (402)
T ss_dssp CSSSCEEEEECTTCCEEEESCCEEEECTTSCEECTTCC-EEEEEECBTTTTBCCTTCCCEECCCCCCCCCCBCCCEEEEE
T ss_pred ECCCCEEEEECCCCCEEEEECCCCCCCCCCCEECCCCC-EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 42786178862798643641565342788878637896-44123145777522256765552144445676553036763
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q gi|254780685|r 134 -------------------------------------------------------------------------------- 133 (243)
Q Consensus 134 -------------------------------------------------------------------------------- 133 (243)
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (402)
T 3a69_A 155 INLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATAPTTASTTLKFNEN 234 (402)
T ss_dssp EEEETTCCCCSSCSCCTTCTTSCSEEEEEEEECTTCCEEEEEEEEEEEETTEEEEEEEETTCTTCCCCCSCSEEEEECTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCEEEEECCC
T ss_conf 02465555665344455776551333337998589972666678776378852379703666555466555226874146
Q ss_pred --------------------------------------------------CCCCCCCCCCCCCCCCC-----CCCCCCCC
Q ss_conf --------------------------------------------------00000000002454223-----43211233
Q gi|254780685|r 134 --------------------------------------------------PQKDEIFNVGEKGEISQ-----KGKVIATM 158 (243)
Q Consensus 134 --------------------------------------------------p~~~~~~~i~~dG~i~~-----~g~~v~~l 158 (243)
+.....+.|++||.|.. ....++++
T Consensus 235 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~dG~~~~~~~~~~i~~dG~v~~~~~~~~~~~~~~~ 314 (402)
T 3a69_A 235 GILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQVLGQI 314 (402)
T ss_dssp SBEEECCEEEEECCCBTTBCCCEEEEECTTCEEESSCCCEEEEEEESCBCCCCEEEEEECTTCEEEEEETTSCEEEEEEE
T ss_pred CCCCCCCCEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
T ss_conf 52145772000234545655543100001120013565311210246655542123421789559997356542100112
Q ss_pred CCCCCCCHHHHHHHCCCCCCCCCCCCCC-----CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 4545576134432025653456665654-----34566415624222140239999999999999999999999999999
Q gi|254780685|r 159 GLYSVDMSQGFVRRENSGISPNIPPTPL-----EDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKS 233 (243)
Q Consensus 159 ~l~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~v~qG~LE~SNVn~~~EMv~lI~~qRafe~~~k~i~~~de~ 233 (243)
.++.|.++.+|...+++.|......... .......|.||+||.||||+.+||++||..||+||+++|+|++.|||
T Consensus 315 ~~~~~~n~~~l~~~g~~~~~~~~~sg~~~~~~~~~~~~~~~~~~~lE~S~V~ldeEmtnli~~Q~aY~A~akvitt~dem 394 (402)
T 3a69_A 315 VLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEASNVDLSKELVNMIVAQRNYQSNAQTIKTQDQI 394 (402)
T ss_dssp CEEECSCGGGSEECSTTCEECCTTTCCCEEECTTBTTBCCCCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 34566785773304796064355677730067887873148107545114799999999999999999975266499999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780685|r 234 MLEAIR 239 (243)
Q Consensus 234 ~~~~in 239 (243)
|.++||
T Consensus 395 ld~lin 400 (402)
T 3a69_A 395 LNTLVN 400 (402)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999970