HHSEARCH alignment of GI: 254780685 and SCOP domain: d1wlga_

Alignment
>d1wlga_ b.152.1.1 (A:) Flagellar hook protein flgE {Salmonella typhimurium [TaxId: 90371]}
Probab=99.84  E-value=8e-22  Score=145.48  Aligned_cols=122  Identities=20%  Similarity=0.377  Sum_probs=90.6

Q ss_pred             EEEEECCCCEEEECCCCC-EEEEECCCCEECCCCCEECCCCCCCCCCCC----C---------CCCCCC-----------
Q ss_conf             213432750244136763-123211220156568454146885356645----4---------421000-----------
Q gi|254780685|r   80 LDFALEGDAWFALESPRG-IILTRDGRFKVTDDGSLVSASGKYPVLDMA----S---------VPIQIP-----------  134 (243)
Q Consensus        80 lD~Ai~G~GfF~V~~~~g-~~yTR~G~F~~d~~G~Lvt~~G~~~vl~~~----g---------~pI~ip-----------  134 (243)
                      |||||+|+|||.|++++| ++|||+|+|++|++|+||+.+|. .|++..    +         .||.+|           
T Consensus         2 LDlAI~G~GFFvV~~~~g~~~YTRaG~F~~D~~G~Lvn~~G~-~l~G~~~d~~~~~~~~~~~~~~i~i~~~~~~~~aTt~   80 (293)
T d1wlga_           2 LDVAISQNGFFRLVDSNGSVFYSRNGQFKLDENRNLVNMQGM-QLTGYPATGTPPTIQQGANPAPITIPNTLMAAKSTTT   80 (293)
T ss_dssp             EECCCSSSCEEEEECTTCCEEEESCCEEEECTTSCEECTTCC-EEEEEECBTTTTBCCTTCCCEECCCCCCCBCCBCCCE
T ss_pred             CCEEECCCEEEEEECCCCCEEEECCCCEEECCCCCEECCCCC-EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf             647874870799876999887844887329899998839999-8985763688863125776554434443457765514


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q gi|254780685|r  135 --------------------------------------------------------------------------------  134 (243)
Q Consensus       135 --------------------------------------------------------------------------------  134 (243)
                                                                                                      
T Consensus        81 ~~~~~NL~~~~~~~~~~~~~~~~~~t~~~~~s~~vyDs~G~~~~v~~~f~k~~~~~w~~~~~~~~~~~~~~~~~~~~~l~  160 (293)
T d1wlga_          81 ASMQINLNSTDPVPSKTPFSVSDADSYNKKGTVTVYDSQGNAHDMNVYFVKTKDNEWAVYTHDSSDPAATAPTTASTTLK  160 (293)
T ss_dssp             EEEEEEEETTCCCCSSCSCCTTCTTSCSEEEEEEEECTTCCEEEEEEEEEEEETTEEEEEEEETTCTTCCCCCSCSEEEE
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEE
T ss_conf             67741664212355322223478776330113676422586422205666204654137871256644546643135653


Q ss_pred             -------------------------------------------------------CCCCCCCCCCCCCCC---CCC--CC
Q ss_conf             -------------------------------------------------------000000000245422---343--21
Q gi|254780685|r  135 -------------------------------------------------------QKDEIFNVGEKGEIS---QKG--KV  154 (243)
Q Consensus       135 -------------------------------------------------------~~~~~~~i~~dG~i~---~~g--~~  154 (243)
                                                                             -.-..+.|++||.|.   .+|  +.
T Consensus       161 F~~~G~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~qdG~~~G~l~~~~i~~dG~i~~~ysNG~~~~  240 (293)
T d1wlga_         161 FNENGILESGGTVNITTGTINGATAATFSLSFLNSMQQNTGANNIVATNQNGYKPGDLVSYQINNDGTVVGNYSNEQEQV  240 (293)
T ss_dssp             ECTTSBEEECCEEEEECCCBTTBCCCEEEEECTTCEEESSCCCEEEEEEECCBCCBCEEEEEECTTCEEEEEETTSCEEE
T ss_pred             CCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCEEE
T ss_conf             27863222333100023441124321000252210001257400244326884311232106658758999976996789


Q ss_pred             CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC-C----CCCCCEEEECCCCCC
Q ss_conf             12334545576134432025653456665654-3----456641562422214
Q gi|254780685|r  155 IATMGLYSVDMSQGFVRRENSGISPNIPPTPL-E----DLSGVTVKRGFLEDS  202 (243)
Q Consensus       155 v~~l~l~~~~~~~~l~~~~~~~~~~~~~~~~~-~----~~~~~~v~qG~LE~S  202 (243)
                      ++||.|+.|.||.+|.+.+++.|..+...+.+ .    .....+|.+|+||+|
T Consensus       241 lgqiala~F~Np~gL~~~g~n~f~~t~~SG~~~~g~~g~~g~G~i~~g~LE~S  293 (293)
T d1wlga_         241 LGQIVLANFANNEGLASQGDNVWAATQASGVALLGTAGSGNFGKLTNGALEAS  293 (293)
T ss_dssp             EEEECEEECSCGGGSEECSTTCEECCTTTCCCEEECTTBTTBCCCSSCEEEEC
T ss_pred             EEEEEEEEECCHHHHHHCCCCEEECCCCCCCCEECCCCCCCCEEEECCCEECC
T ss_conf             88999997359687321259708760016885556899888223842613169


SCOP domain information

class: All beta proteins
fold: Flagellar hook protein flgE
superfamily: Flagellar hook protein flgE
family: Flagellar hook protein flgE
domain: Flagellar hook protein flgE
species: Salmonella typhimurium [TaxId: 90371]