BLAST/PSIBLAST alignment of GI: 254780685 and GI: 116250476 at iteration 1
>gi|116250476|ref|YP_766314.1| flagellar basal body rod protein FlgF [Rhizobium leguminosarum bv. viciae 3841] Length = 244
>gi|115255124|emb|CAK06198.1| putative flagella associated protein [Rhizobium leguminosarum bv. viciae 3841] Length = 244
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/242 (44%), Positives = 163/242 (67%), Gaps = 1/242 (0%)
Query: 1 MQTSFNIGLAAQLALEQRLSTVADNMSNTDTVGFRTIKVKFSEVVGAIKNDIDQKISFVA 60
MQ+ + L++Q+ALE+RL+T+ADNM+N +T GFR +VKF E+V A +N ++ K++FV+
Sbjct: 1 MQSGLYVSLSSQMALEKRLTTIADNMANVNTTGFRATEVKFDEMVAATRNKLNTKVAFVS 60
Query: 61 SGKEYLSKEVGSFISTGTELDFALEGDAWFALESPRGIILTRDGRFKVTDDGSLVSASGK 120
G +YL++ G TG LDFA++GDAWFAL++P G +LTRDGRF + D G LVS G
Sbjct: 61 QGNDYLNEGNGELQHTGNMLDFAIKGDAWFALDTPAGQVLTRDGRFTIKDTGELVSIRG- 119
Query: 121 YPVLDMASVPIQIPQKDEIFNVGEKGEISQKGKVIATMGLYSVDMSQGFVRRENSGISPN 180
YPVLD PIQ+ VG G I Q G+ I ++GL+ D+S+G++R ENSGI
Sbjct: 120 YPVLDAGGAPIQLNTTGGEPAVGTDGIIYQGGRQIGSLGLFEADVSKGYLRYENSGIMTT 179
Query: 181 IPPTPLEDLSGVTVKRGFLEDSNANSMYEMGQMIHLTQKFNSITTLIDENEKSMLEAIRN 240
P + D V V++G+LE+SN N+M E+ Q+I + + F S+++L+ ++E S EA++
Sbjct: 180 EQPRAVVDRFNVGVEQGYLENSNVNAMREITQLIEVNRAFESVSSLMRDSEDSFKEAVQT 239
Query: 241 IA 242
+
Sbjct: 240 LG 241