HHsearch alignment for GI: 254780687 and conserved domain: PRK08158
>PRK08158 surface presentation of antigens protein SpaO; Validated.
Probab=98.90 E-value=1.3e-08 Score=75.81 Aligned_cols=73 Identities=19% Similarity=0.206 Sum_probs=68.5
Q ss_pred HHHHCEEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCEEEEEECCEEEEEEEEEEECCEEEEEEEECCCC
Q ss_conf 9740800799998123430989945799978982578997389999999999999987889789999842581
Q gi|254780687|r 234 KTYQLNVNIDTRINLKKTTLKDVVTLKIGQVIPFLHREKTCAILSANGKEIYSCELGRVGKNYTIRITDRINF 306 (318)
Q Consensus 234 ~l~~~~v~i~a~Lg~~~l~l~dil~L~vGDVI~L~~~~~~~v~v~v~g~~~f~g~~G~~~~~~AVrI~~~i~~ 306 (318)
T Consensus 226 d~~~LpV~l~FvL~~~~~tl~eL~~l~pG~vl~L~~~~e~~V~I~aNg~l~g~GELV~i~d~LgVEI~~w~~~ 298 (303)
T PRK08158 226 GLNQLPVKLEFVLYRKNVTLAELEELCQQQLLSLPTNAELNVEIRANGALLGNGELVQMDDTLGVEIHEWLSG 298 (303)
T ss_pred CHHHCCEEEEEEECCCEECHHHHHHCCCCCEECCCCCCCCEEEEEECCEEEEEEEEEEECCEEEEEEHHHHCC
T ss_conf 7532925899997374885999963089847617999764089999998986665999888366877665546