HHsearch alignment of GI: 254780687 and MMDB domain: 3h2d_A_
>3h2d_A (A:) CHEC-like superfamily protein; NP_719446.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Shewanella oneidensis mr-1} PDB: 3iic_A*
Probab=97.51 E-value=0.0054 Score=38.49 Aligned_cols=148 Identities=7% Similarity=0.050 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHCCCCCEEEEEEEC-CCCCCEEEEEECHHHHHHHHHHHHCCC
Q ss_conf 9999999999999998629807998647256679989711688639999973-677833999988789999998872788
Q gi|254780687|r 37 SLGYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFSHIIHSFKENFVFSQASL-SSWSSNFFIGCSNNLVITLLENLLGAS 115 (318)
Q Consensus 37 ~~~e~~~r~l~~~l~~~~~~~v~v~~~~ve~~~~~e~i~~l~~p~~~~i~~~-~pl~g~~ll~id~~l~~~lid~~lGG~ 115 (318)
++...+.......|++.++..+.++...++.. ...+.+.+.++... ..++|..++.++...+..++..++|++
T Consensus 5 Ei~n~~~~~a~~~l~~~~~~~v~~~~p~i~~~------~~~~~~~~~v~~~~~G~~~G~~~l~~~~~~a~~la~~l~g~e 78 (155)
T 3h2d_A 5 NFINPFLQSLLNVISTXASLELTPGKPQIKTD------NLAKGDVSGLIGXVGPQTKGSLSITFEQKLVLQIXQNXLGEN 78 (155)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCEECCCEECCC------SCCCEEEEEEEEEEETTEEEEEEEEECHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCEEECC------CCCCCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHCCC
T ss_conf 99889999999999998589854277553224------566783999999873864389999939999999999961999
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCHHHHCCCCCCCEEEEEEEEEEECCEEE
Q ss_conf 87666666565798999999999999999999985100273200000244311000012478718999998866678137
Q gi|254780687|r 116 HETIPQLYNRSLSTVEKKLAKRTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNRLSNEFVTTINMNMTIENVAS 195 (318)
Q Consensus 116 g~~~~~~~~R~lT~iE~~l~~~i~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~vi~i~~~v~~~~~~g 195 (318)
. .++.+.....+..+.+.+..+....|+... +...+..|..............+...+.+.|..+.+...
T Consensus 79 ~--------~~~de~~~dai~El~Nii~G~~~~~l~~~~-~~i~~spP~v~~g~~~~i~~~~~~~~~~~~f~~~~~~~~- 148 (155)
T 3h2d_A 79 P--------GKINEEVTDLVGEITNXVTGGAKNLLGQKG-YEFEXATPXVVSGQGHTISHKANGTKIIXPFTSSYGTAF- 148 (155)
T ss_dssp C--------SSCCHHHHHHHHHHHHHHHHHHHHHHHHTT-CCCEECCCEEEEEEEEEEEECCSSCEEEEEEEETTEEEE-
T ss_pred C--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEEECCCCEEEECCCCEEECCCCCCEEEEEEEECCCCEE-
T ss_conf 8--------872688999999999999999999998579-816505997993798256317899589999994697299-
Q ss_pred EEEEEE
Q ss_conf 999985
Q gi|254780687|r 196 SFVLII 201 (318)
Q Consensus 196 ~~~l~l 201 (318)
+++++
T Consensus 149 -i~l~~ 153 (155)
T 3h2d_A 149 -IEVCF 153 (155)
T ss_dssp -EEEEE
T ss_pred -EEEEE
T ss_conf -99995