HHsearch results for GI: 254780687 and protein with PDBid: 3h2d_A

>3h2d_A CHEC-like superfamily protein; NP_719446.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.86A {Shewanella oneidensis mr-1} PDB: 3iic_A*
Probab=96.83  E-value=0.026  Score=33.01  Aligned_cols=145  Identities=8%  Similarity=0.075  Sum_probs=92.2

Q ss_pred             HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHHHHHHCCCCCEEEEEEE--CCCCCCEEEEEECHHHHHHHHHHHHCCC
Q ss_conf             99999999999999862980799864725667998971168863999997--3677833999988789999998872788
Q gi|254780687|r   38 LGYLYKKFLPKIFKEKMDLDVDISYTSCQSGKFSHIIHSFKENFVFSQAS--LSSWSSNFFIGCSNNLVITLLENLLGAS  115 (318)
Q Consensus        38 ~~e~~~r~l~~~l~~~~~~~v~v~~~~ve~~~~~e~i~~l~~p~~~~i~~--~~pl~g~~ll~id~~l~~~lid~~lGG~  115 (318)
                      +-.-|.......|+..++..+......++..       ..+...+.++..  ..++.|..++.++..++..++..|+|..
T Consensus         6 ~inpFi~a~~~vl~~m~~~~~~~~~~~~~~~-------~~~~~~i~~vi~~~~g~~~G~i~l~~~~~~a~~i~~~m~g~~   78 (155)
T 3h2d_A            6 FINPFLQSLLNVISTMASLELTPGKPQIKTD-------NLAKGDVSGLIGMVGPQTKGSLSITFEQKLVLQIMQNMLGEN   78 (155)
T ss_dssp             HHHHHHHHHHHHHHTTGGGCCEECCCEECCC-------SCCCEEEEEEEEEEETTEEEEEEEEECHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEECCCEEECC-------CCCCCCEEEEEEEECCCCCEEEEEEECHHHHHHHHHHHCCCC
T ss_conf             9889999999999998598855188553204-------556773999999863754479999978999999999862999


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHCHHHHCCC-CCCCEEEEEEEEEEECCEE
Q ss_conf             876666665657989999999999999999999851002732000002443110000124-7871899999886667813
Q gi|254780687|r  116 HETIPQLYNRSLSTVEKKLAKRTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNR-LSNEFVTTINMNMTIENVA  194 (318)
Q Consensus       116 g~~~~~~~~R~lT~iE~~l~~~i~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~e~vi~i~~~v~~~~~~  194 (318)
                      .        .++++.....+..+.+.+++.....++.. +....+..|..... ....+. ..+...+.+.|..+.|.  
T Consensus        79 ~--------~~~de~~~da~~El~N~I~G~~~~~l~~~-g~~~~~s~P~vi~g-~~~~i~~~~~~~~~~i~f~t~~G~--  146 (155)
T 3h2d_A           79 P--------GKINEEVTDLVGEITNMVTGGAKNLLGQK-GYEFEMATPMVVSG-QGHTISHKANGTKIIMPFTSSYGT--  146 (155)
T ss_dssp             C--------SSCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCEECCCEEEEE-EEEEEEECCSSCEEEEEEEETTEE--
T ss_pred             C--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECCCEEEEC-CCCEEECCCCCCEEEEEEECCCCC--
T ss_conf             8--------76468889899999999999999999857-98186049979937-983775178995899999827884--


Q ss_pred             EEEEEEE
Q ss_conf             7999985
Q gi|254780687|r  195 SSFVLII  201 (318)
Q Consensus       195 g~~~l~l  201 (318)
                      -.+++|+
T Consensus       147 ~~i~i~~  153 (155)
T 3h2d_A          147 AFIEVCF  153 (155)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEE
T ss_conf             9999995