BLAST/PSIBLAST alignment of GI: 254780687 and GI: 315121854 at iteration 1
>gi|315121854|ref|YP_004062343.1| flagellar motor switch protein fliM [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 318
>gi|313495256|gb|ADR51855.1| flagellar motor switch protein fliM [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 318
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/317 (65%), Positives = 254/317 (80%)
Query: 1 MRGQSIHKNTSPLHPILLARLTGKLGDKKTIEKISSSLGYLYKKFLPKIFKEKMDLDVDI 60
MR + K+ SPLHP+LLARLTGKLGDKKTIE+IS +LG LY K LPK FKE++D+D+++
Sbjct: 1 MREKRTSKDISPLHPVLLARLTGKLGDKKTIERISYNLGQLYTKLLPKSFKEELDVDLNV 60
Query: 61 SYTSCQSGKFSHIIHSFKENFVFSQASLSSWSSNFFIGCSNNLVITLLENLLGASHETIP 120
SY + QSGKFSHI+HSFKE FVF + SL+ SSN FIGCSNNLVI LLE LL AS ET
Sbjct: 61 SYGNYQSGKFSHILHSFKERFVFYKTSLNGRSSNLFIGCSNNLVIVLLETLLRASCETTQ 120
Query: 121 QLYNRSLSTVEKKLAKRTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNRLSNEF 180
+ +NRSLST+EKKLA + +I+ VL+QCIST Q + L++ Y++D+LK+NTN LSNEF
Sbjct: 121 KSHNRSLSTIEKKLAHLIVTKIATVLDQCISTAQNNRVTLDENYELDFLKQNTNLLSNEF 180
Query: 181 VTTINMNMTIENVASSFVLIIPQETLLKTTLISLSSQNKSENQSEDLIDPFARKTYQLNV 240
VT I M +TI+N+AS F LIIPQETLLK TLISLS Q KS ED D TY+++V
Sbjct: 181 VTAITMVVTIDNIASLFTLIIPQETLLKITLISLSEQGKSAIPLEDCPDQLNGNTYKIHV 240
Query: 241 NIDTRINLKKTTLKDVVTLKIGQVIPFLHREKTCAILSANGKEIYSCELGRVGKNYTIRI 300
I++RINL+K TLKDV+ LKIGQV+PFL +EK AIL+ANGKEIYSCELGR+GKNYT+RI
Sbjct: 241 KIESRINLQKITLKDVLNLKIGQVMPFLDKEKVYAILNANGKEIYSCELGRIGKNYTVRI 300
Query: 301 TDRINFDQKSLKNFLHK 317
DRINFDQ+SL+NFLHK
Sbjct: 301 QDRINFDQESLRNFLHK 317