RPSBLAST alignment for GI: 254780687 and conserved domain: COG1868
>gnl|CDD|32053 COG1868, FliM, Flagellar motor switch protein [Cell motility and secretion]. Length = 332
Score = 135 bits (342), Expect = 1e-32
Identities = 61/324 (18%), Positives = 128/324 (39%), Gaps = 16/324 (4%)
Query: 4 QSIHKNTSPLHPI---LLARLTGKLGDKKTIEKISS--SLGYLYKKFLPKIFKEKMDLDV 58
+ + L + K D+ + E++ + + + + L + V
Sbjct: 15 SGVSEGVEELKEEDERKVKPYDFKRPDRFSKEQLRTLEIIHERFARLLTTSLSNLLRRSV 74
Query: 59 DISYTSCQSGKFSHIIHSFKENFVFSQASLSSWSSNFFIGCSNNLVITLLENLLGASHET 118
D+ S + I S + + S+ + +LV +++ L G
Sbjct: 75 DVEVGSVDQMTYEEFIRSLPNPTILNLFSMKPLKGTALLEFDPSLVFIMVDRLFGGDGRF 134
Query: 119 IPQLYNRSLSTVEKKLAKRTIAQISAVLNQCISTTQESSPNLEDFYDIDYLKKNTNRLSN 178
+ R L+ +E+++ + + +I L + + E P + + N
Sbjct: 135 PAKPEGRELTDIEQRVITKLLERILEALKEAWNAVIELEPEIVRSETNPQFAQIV--SPN 192
Query: 179 EFVTTINMNMTIENVASSFVLIIPQETLLKTTLISLSSQNKSENQSED--LIDPFARKTY 236
E V I + + I N++ F + IP L LSS+ + + +D ++
Sbjct: 193 EIVVLITLEVEIGNLSGMFNICIPYSMLEP-IREKLSSRMQENTREKDPEWRKELRQQVQ 251
Query: 237 QLNVNIDTRINLKKTTLKDVVTLKIGQVIPFLHREKTC---AILSANGKEIYSCELGRVG 293
++ V ++ R+ TL++++ L++G VIP EK +S GK + C+ G+ G
Sbjct: 252 RVEVELEARLGEISLTLREILRLEVGDVIPL---EKPADDRVTVSVGGKPKFLCQYGKSG 308
Query: 294 KNYTIRITDRINFDQKSLKNFLHK 317
Y ++I + IN +++SL L K
Sbjct: 309 GQYAVKILELINSEEESLDELLPK 332