RPSBLAST alignment of GI: 254780687 and protein with PDBid: 1o6a
>1o6a_A Putative flagelar motor switch protein FLIN; TM0680A, C- terminal proteolytic fragment of TM0680A, structural genomics, JCSG, PSI; 1.85A {Thermotoga maritima} SCOP: b.139.1.1 PDB: 1yab_A Length = 96
Score = 54.7 bits (132), Expect = 3e-08
Identities = 18/99 (18%), Positives = 41/99 (41%), Gaps = 6/99 (6%)
Query: 216 SQNKSENQSEDLIDPFARKTYQLNVNIDTRINLKKTTLKDVVTLKIGQVIPFLHREKTCA 275
S+ + D ++ + + + + + TLK V+ + G +I
Sbjct: 1 SETRKTEVPSDKLELL----LDIPLKVTVELGRTRMTLKRVLEMIHGSIIELDKLTGEPV 56
Query: 276 ILSANGKEIYSCELGRVGKNYTIRITDRINFDQ--KSLK 312
+ NGK I E+ + +N+ +RIT+ ++ + + L
Sbjct: 57 DILVNGKLIARGEVVVIDENFGVRITEIVSPKERLELLN 95