HHsearch alignment for GI: 254780688 and conserved domain: PRK05933
>PRK05933 type III secretion system protein; Validated.
Probab=96.81 E-value=0.0072 Score=36.27 Aligned_cols=67 Identities=15% Similarity=0.351 Sum_probs=55.1
Q ss_pred HHHC-CCCEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCC------EEEEECCEEEEEEEEEEECCCCCEEEE
Q ss_conf 3430-55138999992134429999457978899847778880------699999989999999995688870558
Q gi|254780688|r 70 DLIM-NIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGES------VDITINNQKIAKGEITIMEEDDTHFGV 138 (147)
Q Consensus 70 ~~l~-dipv~i~veLG~~~i~i~dll~L~~G~Vi~Ld~~~~ep------V~i~vng~~ia~GElv~v~e~~~~~gv 138 (147)
T Consensus 207 ~~ld~~~~i~lsvEvG~tqLsqeEW~qv~~GdFi~LDSCsyDP~~~~~~~lLti~g~~ff~gr~~--d~~~g~fki 280 (371)
T PRK05933 207 HKLDKQTPITLSVEVGYCQLSQEEWHQVVPGSFILLDSCLYDPDTEESGALLTVQGHQFFGGRFL--DPQSGEFKI 280 (371)
T ss_pred HHHCCCCCEEEEEEEEEEEECHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCEECCCCEEC--CCCCCCEEE
T ss_conf 33056652599998613897499985106785798721344898765535899856862265635--777770576