HHsearch alignment for GI: 254780688 and conserved domain: PRK05933

>PRK05933 type III secretion system protein; Validated.
Probab=96.81  E-value=0.0072  Score=36.27  Aligned_cols=67  Identities=15%  Similarity=0.351  Sum_probs=55.1

Q ss_pred             HHHC-CCCEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCC------EEEEECCEEEEEEEEEEECCCCCEEEE
Q ss_conf             3430-55138999992134429999457978899847778880------699999989999999995688870558
Q gi|254780688|r   70 DLIM-NIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGES------VDITINNQKIAKGEITIMEEDDTHFGV  138 (147)
Q Consensus        70 ~~l~-dipv~i~veLG~~~i~i~dll~L~~G~Vi~Ld~~~~ep------V~i~vng~~ia~GElv~v~e~~~~~gv  138 (147)
T Consensus       207 ~~ld~~~~i~lsvEvG~tqLsqeEW~qv~~GdFi~LDSCsyDP~~~~~~~lLti~g~~ff~gr~~--d~~~g~fki  280 (371)
T PRK05933        207 HKLDKQTPITLSVEVGYCQLSQEEWHQVVPGSFILLDSCLYDPDTEESGALLTVQGHQFFGGRFL--DPQSGEFKI  280 (371)
T ss_pred             HHHCCCCCEEEEEEEEEEEECHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEECCEECCCCEEC--CCCCCCEEE
T ss_conf             33056652599998613897499985106785798721344898765535899856862265635--777770576