HHsearch alignment for GI: 254780688 and conserved domain: PRK06933

>PRK06933 type III secretion system protein; Validated.
Probab=99.65  E-value=1.1e-15  Score=109.40  Aligned_cols=74  Identities=22%  Similarity=0.442  Sum_probs=69.8

Q ss_pred             HHHCCCCEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEEEEEECC
Q ss_conf             34305513899999213442999945797889984777888069999998999999999568887055899973167
Q gi|254780688|r   70 DLIMNIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEITIMEEDDTHFGVRVIEILNA  146 (147)
Q Consensus        70 ~~l~dipv~i~veLG~~~i~i~dll~L~~G~Vi~Ld~~~~epV~i~vng~~ia~GElv~v~e~~~~~gvrIt~iis~  146 (147)
T Consensus       231 tdldqLpV~l~Fevgrqt~tL~~L~sL~pG~lidL~~pi~g~V~i~ANg~~lG~GeLV~I~~---rLGVRV~~L~~~  304 (307)
T PRK06933        231 TDLNQLPVQVSFEVGRQTLDLHTLTSLQPGSLIDLTTPVDGEVRLLANGRLLGHGRLVEIQG---RLGVRVERLFGV  304 (307)
T ss_pred             CCHHHCCEEEEEEECCEEECHHHHHCCCCCCEEECCCCCCCCEEEEECCEEECCEEEEEECC---EEEEEEEEEECC
T ss_conf             64421846899996662644999840589857866899887479998775851115998778---535899984245