HHsearch alignment for GI: 254780688 and conserved domain: PRK06933
>PRK06933 type III secretion system protein; Validated.
Probab=99.65 E-value=1.1e-15 Score=109.40 Aligned_cols=74 Identities=22% Similarity=0.442 Sum_probs=69.8
Q ss_pred HHHCCCCEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEEEEEECC
Q ss_conf 34305513899999213442999945797889984777888069999998999999999568887055899973167
Q gi|254780688|r 70 DLIMNIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEITIMEEDDTHFGVRVIEILNA 146 (147)
Q Consensus 70 ~~l~dipv~i~veLG~~~i~i~dll~L~~G~Vi~Ld~~~~epV~i~vng~~ia~GElv~v~e~~~~~gvrIt~iis~ 146 (147)
T Consensus 231 tdldqLpV~l~Fevgrqt~tL~~L~sL~pG~lidL~~pi~g~V~i~ANg~~lG~GeLV~I~~---rLGVRV~~L~~~ 304 (307)
T PRK06933 231 TDLNQLPVQVSFEVGRQTLDLHTLTSLQPGSLIDLTTPVDGEVRLLANGRLLGHGRLVEIQG---RLGVRVERLFGV 304 (307)
T ss_pred CCHHHCCEEEEEEECCEEECHHHHHCCCCCCEEECCCCCCCCEEEEECCEEECCEEEEEECC---EEEEEEEEEECC
T ss_conf 64421846899996662644999840589857866899887479998775851115998778---535899984245