HHsearch alignment for GI: 254780688 and conserved domain: PRK06933
>PRK06933 type III secretion system protein; Validated.
Probab=96.06 E-value=0.018 Score=34.00 Aligned_cols=54 Identities=15% Similarity=0.291 Sum_probs=47.3
Q ss_pred CCCCEEEEEEEEEEEECHHHHHCCCCCCEEECCC--CCCCCEEEEECCEEEEEEEE
Q ss_conf 0551389999921344299994579788998477--78880699999989999999
Q gi|254780688|r 73 MNIPVKMQIILGSCCMQISNLVNLSKGDVITLDK--RVGESVDITINNQKIAKGEI 126 (147)
Q Consensus 73 ~dipv~i~veLG~~~i~i~dll~L~~G~Vi~Ld~--~~~epV~i~vng~~ia~GEl 126 (147)
T Consensus 153 l~LPl~LSlqwg~~~Ltl~e~~tLe~GDVll~p~~~~~~~q~L~~ve~~p~a~cql 208 (307)
T PRK06933 153 IPLPLLLSLQWGKVYLTLDEFDSLELGDVLLAPEGSGPNSPVLAYVEGRPWAYCQL 208 (307)
T ss_pred CCCEEEEEEEEEEEEEEHHHHHCCCCCCEEECCCCCCCCCEEEEEECCCCCEEECC
T ss_conf 14206999874026987878410022558802875677871489983886556504