HHsearch alignment of GI: 254780688 and MMDB domain: 1o9y_A_

>1o9y_A (A:) HRCQ2; secretory protein, HRP, type III secretion system, phytopathogenicity; 2.29A {Pseudomonas syringae}
Probab=99.73  E-value=4.7e-17  Score=116.79  Aligned_cols=78  Identities=14%  Similarity=0.320  Sum_probs=72.8

Q ss_pred             HHHHHHHCCCCEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEEEEEEC
Q ss_conf             00023430551389999921344299994579788998477788806999999899999999956888705589997316
Q gi|254780688|r   66 TDNFDLIMNIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEITIMEEDDTHFGVRVIEILN  145 (147)
Q Consensus        66 ~~~~~~l~dipv~i~veLG~~~i~i~dll~L~~G~Vi~Ld~~~~epV~i~vng~~ia~GElv~v~e~~~~~gvrIt~iis  145 (147)
                      .+....+.++|++++++||++++++++|++|++||||+|++.+.++|++++||+++|+|+++.+|.   +|||||+++++
T Consensus         6 ~~l~~~l~~~~v~l~~~l~~~~l~l~el~~L~~Gdvi~l~~~~~~~v~l~v~g~~~~~g~lg~~~~---~~av~I~~~i~   82 (84)
T 1o9y_A            6 QDEPPALDSLALDLTLRCGELRLTLAELRRLDAGTILEVTGISPGHATLCHGEQVVAEGELVDVEG---RLGLQITRLVT   82 (84)
T ss_dssp             -----CCTTCEEEEEEEEEEEEEEHHHHHTCCTTCEEEECSSCTTEEEEEETTEEEEEEEEEEETT---EEEEEEEEEC-
T ss_pred             CCCHHHHHCCCEEEEEEEECCEEEHHHHHCCCCCCEEEECCCCCCCEEEEECCEEEEEEEEEEECC---EEEEEEEEEEE
T ss_conf             126557726847999999013857999951899999990777899899999889999997999999---99999999000


Q ss_pred             C
Q ss_conf             7
Q gi|254780688|r  146 A  146 (147)
Q Consensus       146 ~  146 (147)
                      .
T Consensus        83 ~   83 (84)
T 1o9y_A           83 R   83 (84)
T ss_dssp             -
T ss_pred             C
T ss_conf             7