HHsearch results for GI: 254780688 and protein with PDBid: 1o9y_A

>1o9y_A HRCQ2; secretory protein, HRP, type III secretion system, phytopathogenicity; 2.29A {Pseudomonas syringae} SCOP: b.139.1.1

Probab=99.78  E-value=1.6e-18  Score=124.34  Aligned_cols=74  Identities=14%  Similarity=0.329  Sum_probs=70.7

Q ss_pred             HHHCCCCEEEEEEEEEEEECHHHHHCCCCCCEEECCCCCCCCEEEEECCEEEEEEEEEEECCCCCEEEEEEEEEECC
Q ss_conf             34305513899999213442999945797889984777888069999998999999999568887055899973167
Q gi|254780688|r   70 DLIMNIPVKMQIILGSCCMQISNLVNLSKGDVITLDKRVGESVDITINNQKIAKGEITIMEEDDTHFGVRVIEILNA  146 (147)
Q Consensus        70 ~~l~dipv~i~veLG~~~i~i~dll~L~~G~Vi~Ld~~~~epV~i~vng~~ia~GElv~v~e~~~~~gvrIt~iis~  146 (147)
                      ..|.++|++++|+||++++++++|++|++|++|+|++.+.++|+|++||+++|+||++.+|+   +||||||++++.
T Consensus        10 ~~l~~i~v~l~~~Lg~~~~~l~el~~L~~Gdvl~L~~~~~~~v~l~v~g~~i~~Gel~~~~~---~~av~It~~i~~   83 (84)
T 1o9y_A           10 PALDSLALDLTLRCGELRLTLAELRRLDAGTILEVTGISPGHATLCHGEQVVAEGELVDVEG---RLGLQITRLVTR   83 (84)
T ss_dssp             -CCTTCEEEEEEEEEEEEEEHHHHHTCCTTCEEEECSSCTTEEEEEETTEEEEEEEEEEETT---EEEEEEEEEC--
T ss_pred             HHHHCCCEEEEEEEEEEEEEHHHHHCCCCCCEEECCCCCCCCEEEEECCEEEEEEEEEEECC---EEEEEEEEEECC
T ss_conf             57717827999999310868999952899999994777999899999999999999999999---999999991007